Citrus Sinensis ID: 043610

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430
Protein Sequence
MATTTSSPHSLFLQNRNSHPLNKNNLASFTNLKKINFFNTKRAISVTCSAASAPTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA
Secondary Structure (PSIPRED)
cccccccccEEEccccccccccccccccccccccccccccccccEEEEEcccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccEEEEcccccccEEEcccccccccccccEEEEccccccccccccccccEEEccccccccccccEEEEEccccccccccccccccccHHHHccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEcccccccccccccccccccccccccccccEEEEEEEEEEcccccccccccccccccccEEcccccccccHHHHHHHHHcccccccccccHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHHHccEEEEEEcHHHccccccccccccccccEEEEEEEcEEccccEEcccccccccccEcEEEEcccccccccccHHHccEEEEEHHHHccccccEEEEEEHHHcccccccccHHHcHHHHHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccEEcccHHHEcccEEEEEcccHHHHHHHHHHHHHccEEccEcccccccEEEEccccccHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
matttssphslflqnrnshplnknnlasftnlkkinffntKRAISVtcsaasaptqdrTAAQIQsgqedrvfnfaagpanlpEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLqggattqfaavplnlctpndpvdyivtgswgdKAFKEAQKfcnpqviwsgkaekytkipnfdaleqnpdakylhicanetihgvefkeypsaknstgILVADMssnfcskpvdvtrFGVIYagaqknvgpsgVTIVIVRKDllgnaqdktplmldykihdennslyntppcyciyMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVidgsngfykcpvEKSVRSfmnvpftlekSDLEAEFVKEAAKEKMVQLKghrsvggmRASIYNAMPLAGVEKLVAFMKDFQAKHA
Flexible Loop (DISEMBL)
matttssphslflqnrnshplnkNNLASFTNLKKINFFNTKRAISVTCsaasaptqDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFcnpqviwsgKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAgaqknvgpsgVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMvqlkghrsvggmRASIYNAMPLAGVEKLVAFMKDFQAKHA
Low Complexity Region (SEG)
MATTTSSPHSLFLQNRNSHPLNKNNLASFTNLKKINFFNTKRAISVTCSAASAPTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLeaefvkeaakekMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA
Disordered region (IsUnstruct)
*************************LASFTNLKKINFFNTKRAISVTCS*********************VFNFAAGPANLPEKVLLKAQSELYNWRGSG************FKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVK******MVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK*******
Disordered Region (DISOPRED)
***********************************************************************FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK**
Disordered Region (DISEMBL)
**********LFLQNRNSHPLNKNNLASFTNLKKINFFNTKRAISVTC****************SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA
Disordered Region (DISPRO)
*********S******NSHPLNKNNLASFTNLKKINFFNTKRAISVTCSAASAP***************RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATTTSSPHSLFLQNRNSHPLNKNNLASFTNLKKINFFNTKRAISVTCSAASAPTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	430	2.2.26 [Sep-21-2011]
Q96255	430	Phosphoserine aminotransf	no	no	0.983	0.983	0.741	0.0
P52877	430	Phosphoserine aminotransf	N/A	no	0.990	0.990	0.712	1e-175
C1D8N3	359	Phosphoserine aminotransf	yes	no	0.827	0.991	0.559	1e-117
Q820S0	368	Phosphoserine aminotransf	yes	no	0.837	0.978	0.536	1e-112
B4SP45	361	Phosphoserine aminotransf	yes	no	0.832	0.991	0.513	1e-111
B2FKF0	361	Phosphoserine aminotransf	yes	no	0.832	0.991	0.516	1e-110
Q7NVP1	362	Phosphoserine aminotransf	yes	no	0.837	0.994	0.529	1e-110
Q3SK88	359	Phosphoserine aminotransf	yes	no	0.827	0.991	0.532	1e-110
B5EPR5	362	Phosphoserine aminotransf	yes	no	0.832	0.988	0.530	1e-109
B7J6V1	362	Phosphoserine aminotransf	yes	no	0.832	0.988	0.530	1e-109

>sp|Q96255|SERC_ARATH Phosphoserine aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=At4g35630 PE=2 SV=1

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/437 (74%), Positives = 369/437 (84%), Gaps = 14/437 (3%)

Query: 1   MATTTSSPHSLFLQNRNSHPLN----KNNLASFTNLKK---INFFNTKRAISVTCSAASA 53
           MA TT+S    FL   N+  +     K++  SF +L K   +NF +  + ++V C A++ 
Sbjct: 1   MAATTNS----FLVGSNNTQIPALKPKSSSQSFLHLSKPNTVNFVSKTKPVAVRCVASTT 56

Query: 54  PTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEF 113
             QD   +    G ++RVFNFAAGPA LPE VLLKAQ++LYNWRGSGMSVMEMSHRGKEF
Sbjct: 57  QVQDGVRSG-SVGSQERVFNFAAGPATLPENVLLKAQADLYNWRGSGMSVMEMSHRGKEF 115

Query: 114 KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA 173
            SII+KAESDLR LL IPQEYSVLFLQGGATTQFAA+PLNLC  +D VD++VTGSWGDKA
Sbjct: 116 LSIIQKAESDLRQLLEIPQEYSVLFLQGGATTQFAALPLNLCKSDDTVDFVVTGSWGDKA 175

Query: 174 FKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKN 233
            KEA+K+C   VIWSGK+EKYTK+P+F+ LEQ PDAKYLHICANETIHGVEFK+YP  KN
Sbjct: 176 VKEAKKYCKTNVIWSGKSEKYTKVPSFEELEQTPDAKYLHICANETIHGVEFKDYPVPKN 235

Query: 234 STGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLML 293
             G LVADMSSNFCSKPVDV++FGVIY GAQKNVGPSGVTIVI+RKDL+GNAQD TP+ML
Sbjct: 236 --GFLVADMSSNFCSKPVDVSKFGVIYGGAQKNVGPSGVTIVIIRKDLIGNAQDITPVML 293

Query: 294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF 353
           DYKIHDEN+SLYNTPPC+ IYMCGLVFE LLE GGL EVEK N++KA+LLYN I+ SNGF
Sbjct: 294 DYKIHDENSSLYNTPPCFGIYMCGLVFEDLLEQGGLKEVEKKNQRKADLLYNAIEESNGF 353

Query: 354 YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413
           ++CPVEKSVRS MNVPFTLEKS+LEAEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 354 FRCPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413

Query: 414 GVEKLVAFMKDFQAKHA 430
           GVEKLVAFMKDFQAKHA
Sbjct: 414 GVEKLVAFMKDFQAKHA 430

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 5EC: 2

>sp|P52877|SERC_SPIOL Phosphoserine aminotransferase, chloroplastic OS=Spinacia oleracea PE=2 SV=1

 Score =  614 bits (1583), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 308/432 (71%), Positives = 345/432 (79%), Gaps = 6/432 (1%)

Query: 1   MATTTSSPHSLFLQNRNSHPLNKNNLASFTNLKKINFFNTKRAISVTCSAASAPTQDRTA 60
           MA T+S+  +LFL+     P N       T+   +NF        +TCSA    T   T 
Sbjct: 3   MAATSSTQTNLFLK----APFNPQQNCQQTHFLPLNFKIRNPISRITCSATPTATAVSTT 58

Query: 61  AQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKA 120
            +I    E+RVFNFAAGPA LPE VL KAQSEL NWRGSGMSVMEMSHRGKEF SII+KA
Sbjct: 59  TKIDQRSEERVFNFAAGPAVLPENVLQKAQSELLNWRGSGMSVMEMSHRGKEFTSIIDKA 118

Query: 121 ESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF 180
           E+DLR LLNIP +Y+VLFLQGGA+TQF+A+PLNLCTP+  VDYIVTGSWGDKA KEA K+
Sbjct: 119 EADLRTLLNIPSDYTVLFLQGGASTQFSAIPLNLCTPDSAVDYIVTGSWGDKAAKEAAKY 178

Query: 181 CNPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFKEYPSAKNSTGIL 238
                IWSGK++ Y +IPNFD  E  QN  A+YLHICANETI+GVEFK+YP   N  G L
Sbjct: 179 AAVSSIWSGKSDNYVRIPNFDGSEFVQNSQARYLHICANETIYGVEFKKYPVPANPDGFL 238

Query: 239 VADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIH 298
           VADMSSNFCSKPVDVT+FG+IYAGAQKNVGPSGVTIVIVR DL+GNAQ  TP+MLDYKIH
Sbjct: 239 VADMSSNFCSKPVDVTKFGLIYAGAQKNVGPSGVTIVIVRNDLIGNAQKMTPVMLDYKIH 298

Query: 299 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV 358
            +N SLYNTPPCY IYMCGLVFE LL  GGL EVEK N+ KA++LY+ ID SNGFYKCPV
Sbjct: 299 ADNKSLYNTPPCYGIYMCGLVFEDLLNQGGLVEVEKKNKAKAQVLYDAIDESNGFYKCPV 358

Query: 359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL 418
           EKSVRS MNVPFTLEKS+LE +F+KEAAKEKMV LKGHRSVGGMRASIYNAMPLAGVEKL
Sbjct: 359 EKSVRSLMNVPFTLEKSELEGDFIKEAAKEKMVALKGHRSVGGMRASIYNAMPLAGVEKL 418

Query: 419 VAFMKDFQAKHA 430
           VAFMK+FQAKHA
Sbjct: 419 VAFMKEFQAKHA 430

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Spinacia oleracea (taxid: 3562)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|C1D8N3|SERC_LARHH Phosphoserine aminotransferase OS=Laribacter hongkongensis (strain HLHK9) GN=serC PE=3 SV=1

 Score =  422 bits (1086), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/361 (55%), Positives = 259/361 (71%), Gaps = 5/361 (1%)

Query: 71  VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI 130
           ++NF+AGPA LP+ VL +AQ EL +W GSGMSVMEMSHRG+EF SI  +AE+DLR LL I
Sbjct: 3   IYNFSAGPALLPQDVLREAQRELTDWHGSGMSVMEMSHRGREFMSIHARAEADLRELLQI 62

Query: 131 PQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGK 190
           P  Y VLFLQGGA +QF+ VP+NL       DY++TG WG  A KEA+ + + ++  +G+
Sbjct: 63  PDNYRVLFLQGGAHSQFSMVPMNLLRGKTTADYVITGHWGKVAIKEARCYGDMRIAATGE 122

Query: 191 AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGI-LVADMSSNFCSK 249
           A  +  IP     + NPDA YLH  +NETI GV+F   P     +G+ LV DMSS+F S+
Sbjct: 123 ASGFNGIPPQSEWQPNPDAAYLHYVSNETIGGVQFPFIPE----SGVPLVCDMSSDFLSR 178

Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
           PVDV+RFG+I+AGAQKN+GP+G+T+VIVR+DLLG     TP M DYKIH + +S+YNTPP
Sbjct: 179 PVDVSRFGLIFAGAQKNIGPAGLTLVIVREDLLGQTLPGTPTMFDYKIHADADSMYNTPP 238

Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            Y IYM GLVF++L + GG+  ++  N +KA LLY+ ID S+GFY+CPV+   RS MNVP
Sbjct: 239 TYAIYMAGLVFQWLKDNGGVRGIQMRNEEKAGLLYHTIDSSDGFYRCPVDVECRSRMNVP 298

Query: 370 FTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429
           F L    LE  FV EA    ++QLKGHRSVGG+RASIYNAMP  GV+ LVAFM +F  +H
Sbjct: 299 FRLRTEVLEKRFVDEADMAGLLQLKGHRSVGGVRASIYNAMPFEGVKALVAFMAEFARRH 358

Query: 430 A 430
            
Sbjct: 359 G 359

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Laribacter hongkongensis (strain HLHK9) (taxid: 557598)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|Q820S0|SERC_NITEU Phosphoserine aminotransferase OS=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN=serC PE=3 SV=1

 Score =  404 bits (1038), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/367 (53%), Positives = 257/367 (70%), Gaps = 7/367 (1%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           +++NF+AGPA LPE+VL +A+ E+ +W GSGMSVMEMSHRGKEF SI ++ ES LR L  
Sbjct: 3   KIYNFSAGPAVLPEEVLEQAREEMLDWHGSGMSVMEMSHRGKEFMSIADETESALRELAG 62

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP  Y VLFLQGGA++QFA VP+NL       DY+ TG W  KA  EA+ + + Q+  S 
Sbjct: 63  IPDHYKVLFLQGGASSQFAMVPMNLLGKKGKADYVNTGQWSAKAISEAKNYGSVQIAASS 122

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYP-----SAKNSTGILVADMSS 244
           +++ +  +P       +PDA Y+H  +NETI GVEF+  P     +  N    LVADMSS
Sbjct: 123 ESDGFNSVPPLAQWHISPDAAYVHYASNETIGGVEFQWTPDLSAVAGDNKNIPLVADMSS 182

Query: 245 NFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNS 303
           NF S+P DV++FG+IYAGAQKNVGP+G+ +VIVR+DLL       TP M  YK H +N S
Sbjct: 183 NFLSRPFDVSKFGLIYAGAQKNVGPAGLVVVIVREDLLDIPPLAGTPAMFRYKTHADNAS 242

Query: 304 LYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR 363
           +YNTPP Y IY+ GLV E+L + GGL  +E+ N  KA+L+Y++ID S+ FY CPV ++ R
Sbjct: 243 MYNTPPTYAIYIMGLVMEWLKKQGGLTAIEQRNIAKAKLIYDLIDVSS-FYHCPVNQADR 301

Query: 364 SFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK 423
           S MNVPFTL    L+  F+K+A    ++QLKGHRSVGGMRASIYNAMPL GV+ LV FM+
Sbjct: 302 SRMNVPFTLSDPGLDDAFLKQAQAHGLIQLKGHRSVGGMRASIYNAMPLEGVQTLVTFMR 361

Query: 424 DFQAKHA 430
           +F+  HA
Sbjct: 362 EFEKNHA 368

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) (taxid: 228410)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|B4SP45|SERC_STRM5 Phosphoserine aminotransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=serC PE=3 SV=1

 Score =  400 bits (1029), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 185/360 (51%), Positives = 249/360 (69%), Gaps = 2/360 (0%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           R FNF+AGPA LPE VL +AQ+E+ +W GSG S++EMSHRG EF S+  +AE+DLR LL+
Sbjct: 3   RAFNFSAGPATLPESVLRQAQAEMLDWHGSGASIVEMSHRGAEFMSVAAEAEADLRRLLD 62

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP++Y+VLFL GGATTQ A +PLN   P    DY+V+G WG  A K+A  + +  +  S 
Sbjct: 63  IPEDYAVLFLSGGATTQQALIPLNFAAPGQRADYVVSGHWGKTAVKQAGVYVDVNIAASS 122

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK 249
           +A  Y ++P     + +PDA Y+H+ ANETIHGVEF++ P   N    L+AD SS+  S+
Sbjct: 123 EANGYRELPARADWQLSPDAAYVHLTANETIHGVEFRDVPDTGNVP--LIADFSSSIASE 180

Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
           P+DV R+GVIYAGAQKN+GP G+ ++I+R DLL  +      + DY+ H   +S+ NTPP
Sbjct: 181 PLDVRRYGVIYAGAQKNLGPVGIAVMIIRLDLLERSGQPRADIFDYRSHVARDSMLNTPP 240

Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            +  Y+ GLVF+++L  GG+ E  K N  KA L+Y  IDGS GFY+  V  + RS MN+P
Sbjct: 241 TWNWYLAGLVFKWMLAEGGVAEFAKRNAAKAALVYGAIDGSGGFYRNEVAHAARSRMNIP 300

Query: 370 FTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429
           F L  ++L+A FV EA    ++ LKGH+ VGG+RAS+YNAMPLAG E LVAFM DFQ +H
Sbjct: 301 FFLPDAELDARFVAEAKAAGLLALKGHKVVGGIRASLYNAMPLAGAEALVAFMADFQQRH 360

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Stenotrophomonas maltophilia (strain R551-3) (taxid: 391008)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|B2FKF0|SERC_STRMK Phosphoserine aminotransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=serC PE=3 SV=1

 Score =  400 bits (1028), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/360 (51%), Positives = 248/360 (68%), Gaps = 2/360 (0%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           R FNF+AGPA LPE VL +AQ+E+ +W GSG S++EMSHRG EF S+  +AE+DLR LL+
Sbjct: 3   RAFNFSAGPATLPESVLRQAQAEMLDWHGSGASIVEMSHRGAEFMSVAAEAEADLRRLLD 62

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP +Y+VLFL GGATTQ A +PLN   P    DY+V+G WG  A K+A  + +  +  S 
Sbjct: 63  IPDDYAVLFLSGGATTQQALIPLNFAAPGQRADYVVSGHWGKTAVKQAGVYVDVNIAASS 122

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK 249
           +A  Y ++P     + + DA Y+HI ANETIHGVEF++ P   N    L+AD SS+  S+
Sbjct: 123 EANGYRELPARADWQLSRDAAYVHITANETIHGVEFRDVPDTGNVP--LIADFSSSIASE 180

Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
           P+DV R+GVIYAGAQKN+GP GV ++I+R+DLL  +      + DY+ H   +S+ NTPP
Sbjct: 181 PLDVRRYGVIYAGAQKNLGPVGVAVMIIRRDLLERSGQPRADIFDYRSHVARDSMLNTPP 240

Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            +  Y+ GLVF+++L  GG+ E  K N  KA L+Y  IDGS GFY+  V  + RS MN+P
Sbjct: 241 TWNWYLAGLVFKWMLAEGGVTEFAKRNAAKAALVYGAIDGSGGFYRNEVAYAARSRMNIP 300

Query: 370 FTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429
           F L  ++L+A FV EA    ++ LKGH+ VGG+RAS+YNAMPLAG E LVAFM DFQ +H
Sbjct: 301 FFLPDAELDARFVAEAKAAGLLALKGHKVVGGIRASLYNAMPLAGAEALVAFMADFQQRH 360

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Stenotrophomonas maltophilia (strain K279a) (taxid: 522373)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|Q7NVP1|SERC_CHRVO Phosphoserine aminotransferase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=serC PE=3 SV=1

 Score =  399 bits (1026), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/361 (52%), Positives = 254/361 (70%), Gaps = 1/361 (0%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           +V+NF+AGPA LP +VL +AQSEL +W GSGMSVMEMSHRGKEF  II  AE DLR L+ 
Sbjct: 3   KVYNFSAGPAVLPHQVLAEAQSELLDWHGSGMSVMEMSHRGKEFMEIIHDAEQDLRQLMG 62

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP  Y VLFLQGGA+ QFA  PLNL    D +D + TG W   A KEA+++    V+ S 
Sbjct: 63  IPAGYKVLFLQGGASLQFAMAPLNLLGDKDSIDIVNTGHWSKLAIKEAKRYAKVNVVASS 122

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK 249
           +   +  +P   A +++P+A YLH  +NETI G++F   P+ ++    LV DMSS+F S+
Sbjct: 123 EDRNFCYVPEEAAWQRDPNAAYLHYTSNETIGGLQFPYIPAEQHGVP-LVCDMSSDFLSR 181

Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
            VDV+RFG+IYAGAQKN+GPSG+T++++R+DLLG A+   P ML+Y++H + +S+YNTP 
Sbjct: 182 EVDVSRFGMIYAGAQKNIGPSGLTVLLIREDLLGKARADIPTMLNYQVHADADSMYNTPG 241

Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            Y IY+ GLVF++L E GG+  +   N +KA LLY+VID S GFY   +E+  RS MNV 
Sbjct: 242 TYPIYIAGLVFKWLKEQGGVKGIATRNEEKAGLLYHVIDSSGGFYSTHIEQPFRSKMNVV 301

Query: 370 FTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429
           F L    L+  F+ EA K  + QLKGHR+VGGMRASIYNAMP+ GV+ LV FM+DF  ++
Sbjct: 302 FKLRDEALDEIFLLEARKNGLAQLKGHRAVGGMRASIYNAMPIEGVKSLVNFMQDFARQY 361

Query: 430 A 430
            
Sbjct: 362 G 362

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) (taxid: 243365)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|Q3SK88|SERC_THIDA Phosphoserine aminotransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=serC PE=3 SV=1

 Score =  398 bits (1022), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/359 (53%), Positives = 250/359 (69%), Gaps = 3/359 (0%)

Query: 71  VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI 130
           ++NF+AGPA LP+ VL + Q+EL +W GSGMSVMEMSHRGKEF  I  +AE+DLR L+ I
Sbjct: 3   IYNFSAGPAVLPKDVLQQVQAELVDWHGSGMSVMEMSHRGKEFMGIAAEAEADLRELMAI 62

Query: 131 PQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGK 190
           P  Y VLFLQGGA++QFA VP+NL       DY+ TG W  KA KEA+K+    V+ S +
Sbjct: 63  PANYKVLFLQGGASSQFAMVPMNLLRGKASADYLNTGEWSKKAIKEAKKYAAVNVVASSE 122

Query: 191 AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKP 250
              ++  P  D  + +P+A Y+H   NETI GVE    P A +    + ADMSS   S+P
Sbjct: 123 DRNFSYAPTQDRWKLDPNAAYVHYTPNETIGGVEIFWTPEAGDVP--IAADMSSTILSRP 180

Query: 251 VDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPC 310
           +DV+++GVIYAGAQKN+GP+G+TIVIVR+DL+G     TP M DYKIH +N S+YNTP  
Sbjct: 181 IDVSKYGVIYAGAQKNIGPAGLTIVIVREDLMGETVAGTPTMFDYKIHADNESMYNTPAT 240

Query: 311 YCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370
           + +Y  GLVF++L   GGL  +EK+NR+KA LLY  +D ++ FY  PV K  RS MNVPF
Sbjct: 241 FAMYTAGLVFKWLKARGGLAGMEKINREKAALLYEALDATD-FYASPVAKDNRSLMNVPF 299

Query: 371 TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429
           TL+ + L+  F+K A +  ++QLKGHRSVGGMRASIYNAMP  GV+ LV ++  F+  H
Sbjct: 300 TLKDAALDEAFLKGAKERGLLQLKGHRSVGGMRASIYNAMPTEGVKALVDYLHAFEKNH 358

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Thiobacillus denitrificans (strain ATCC 25259) (taxid: 292415)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|B5EPR5|SERC_ACIF5 Phosphoserine aminotransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=serC PE=3 SV=1

 Score =  396 bits (1017), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/360 (53%), Positives = 247/360 (68%), Gaps = 2/360 (0%)

Query: 71  VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI 130
           +FNF+AGPA LP  VL + Q+EL +W GSGMSVMEMSHRG EF  I  +AE DLR LL+I
Sbjct: 5   IFNFSAGPAVLPHVVLEQVQAELLDWHGSGMSVMEMSHRGPEFMKIAAEAEQDLRDLLDI 64

Query: 131 PQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGK 190
           P  Y +LFLQGGAT QFA VPLNL   +    Y+ TG W  KA  EA++F   ++  S +
Sbjct: 65  PANYKILFLQGGATLQFAMVPLNLMRGHGKASYVQTGIWSKKAIAEARRFTAVEIAASNE 124

Query: 191 AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKP 250
               + +P     + +PD  Y+HI  NETI GVEF   P   +    LV+D SS+  SKP
Sbjct: 125 DRHASYVPMQADWQVSPDTAYVHITGNETIGGVEFDFIPDLGDIP--LVSDASSHILSKP 182

Query: 251 VDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPC 310
            DV+RFG+IYAGAQKN+GP+G+T+VIVR DLLG+A   T  MLDY ++ +  S++NTPP 
Sbjct: 183 TDVSRFGLIYAGAQKNIGPAGLTLVIVRDDLLGHAPANTATMLDYAVYAKEESMHNTPPT 242

Query: 311 YCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370
           + IY+ GLVF++L +LGGL  + ++N +KA LLY+ ID S GFY  PVE   RS MNVPF
Sbjct: 243 FAIYVAGLVFKWLKQLGGLERMAEINARKARLLYDAIDESRGFYANPVETRNRSRMNVPF 302

Query: 371 TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430
           TL  + ++  F+K A    ++QLKGHRSVGGMRASIYNAMP AGV+ L  +++DF  +H 
Sbjct: 303 TLADAAMDEAFLKGARSHGLIQLKGHRSVGGMRASIYNAMPEAGVQILADYLRDFARQHG 362

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Acidithiobacillus ferrooxidans (strain ATCC 53993) (taxid: 380394)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|B7J6V1|SERC_ACIF2 Phosphoserine aminotransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=serC PE=3 SV=1

 Score =  396 bits (1017), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/360 (53%), Positives = 247/360 (68%), Gaps = 2/360 (0%)

Query: 71  VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI 130
           +FNF+AGPA LP  VL + Q+EL +W GSGMSVMEMSHRG EF  I  +AE DLR LL+I
Sbjct: 5   IFNFSAGPAVLPHVVLEQVQAELLDWHGSGMSVMEMSHRGPEFMKIAAEAEQDLRDLLDI 64

Query: 131 PQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGK 190
           P  Y +LFLQGGAT QFA VPLNL   +    Y+ TG W  KA  EA++F   ++  S +
Sbjct: 65  PANYKILFLQGGATLQFAMVPLNLMRGHGKASYVQTGIWSKKAIAEARRFTAVEIAASNE 124

Query: 191 AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKP 250
               + +P     + +PD  Y+HI  NETI GVEF   P   +    LV+D SS+  SKP
Sbjct: 125 DRHASYVPMQADWQVSPDTAYVHITGNETIGGVEFDFIPDLGDIP--LVSDASSHILSKP 182

Query: 251 VDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPC 310
            DV+RFG+IYAGAQKN+GP+G+T+VIVR DLLG+A   T  MLDY ++ +  S++NTPP 
Sbjct: 183 TDVSRFGLIYAGAQKNIGPAGLTLVIVRDDLLGHAPANTATMLDYAVYAKEESMHNTPPT 242

Query: 311 YCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370
           + IY+ GLVF++L +LGGL  + ++N +KA LLY+ ID S GFY  PVE   RS MNVPF
Sbjct: 243 FAIYVAGLVFKWLKQLGGLERMAEINARKARLLYDAIDESRGFYANPVETRNRSRMNVPF 302

Query: 371 TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430
           TL  + ++  F+K A    ++QLKGHRSVGGMRASIYNAMP AGV+ L  +++DF  +H 
Sbjct: 303 TLADAAMDEAFLKGARSHGLIQLKGHRSVGGMRASIYNAMPEAGVQILADYLRDFARQHG 362

Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.

Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) (taxid: 243159)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	430
452090846	430	phosphoserine aminotransferase [Prunus p	0.976	0.976	0.775	0.0
359497849	427	PREDICTED: phosphoserine aminotransferas	0.974	0.981	0.773	0.0
356502442	427	PREDICTED: phosphoserine aminotransferas	0.988	0.995	0.75	0.0
359497855	374	PREDICTED: phosphoserine aminotransferas	0.841	0.967	0.861	0.0
15227876	422	putative phosphoserine aminotransferase	0.965	0.983	0.741	0.0
110737825	422	putative phosphoserine aminotransferase	0.965	0.983	0.737	0.0
15237069	430	phosphoserine aminotransferase [Arabidop	0.983	0.983	0.741	0.0
22135922	430	phosphoserine aminotransferase [Arabidop	0.983	0.983	0.741	0.0
297832380	420	hypothetical protein ARALYDRAFT_900110 [	0.960	0.983	0.741	0.0
21592931	430	phosphoserine aminotransferase [Arabidop	0.983	0.983	0.739	0.0

>gi|452090846|gb|AGF95094.1| phosphoserine aminotransferase [Prunus persica]

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/433 (77%), Positives = 370/433 (85%), Gaps = 13/433 (3%)

Query: 6   SSPHSLFLQNRNSHPLNKNNLASFTNL--------KKINFFNTKRAISVTCSAASAPTQD 57
           +SPHSL LQN N+  L KN    FT +              N  +AISV CSA +   QD
Sbjct: 3   TSPHSLLLQNPNTQFL-KNPKIPFTTIPMTSTRLTTTTTTLNPNKAISVKCSATTTHIQD 61

Query: 58  RTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSII 117
           R  AQ QS  +DRVFNFAAGPANLPE VLLKAQSELYNWRGSGMSVMEMSHRGKEF SII
Sbjct: 62  RPPAQPQS--QDRVFNFAAGPANLPENVLLKAQSELYNWRGSGMSVMEMSHRGKEFLSII 119

Query: 118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEA 177
           +KAE+DLR LLNIP EYSVLFLQGGATTQFAA+PLNLC P+D VDY+VTGSWGDKAFKEA
Sbjct: 120 QKAEADLRTLLNIPPEYSVLFLQGGATTQFAAIPLNLCKPDDKVDYVVTGSWGDKAFKEA 179

Query: 178 QKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGI 237
           QK+  P+VIWSGK+EKYTKIP F+ LEQ+PDAKYLHIC NETIHGVEFK YP+ KN  G+
Sbjct: 180 QKYSQPKVIWSGKSEKYTKIPAFEELEQSPDAKYLHICTNETIHGVEFKTYPTPKN--GL 237

Query: 238 LVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI 297
           L+ADMSSNFCSKPVDV++FG+IYAGAQKNVGPSGVT+VI+RKDL+GNAQ+ TP+MLD+KI
Sbjct: 238 LIADMSSNFCSKPVDVSKFGIIYAGAQKNVGPSGVTVVIIRKDLIGNAQEITPVMLDFKI 297

Query: 298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP 357
           HDEN SLYNTPPCY IYMCGLVFE LLE GGL E+EK N++KA+LLYN ID S GFY+CP
Sbjct: 298 HDENKSLYNTPPCYGIYMCGLVFEDLLEQGGLGEIEKKNKRKADLLYNAIDESKGFYRCP 357

Query: 358 VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK 417
           VEKSVRS MNVPFTLEKS+LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK
Sbjct: 358 VEKSVRSLMNVPFTLEKSELEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK 417

Query: 418 LVAFMKDFQAKHA 430
           LV FMKDFQAKHA
Sbjct: 418 LVDFMKDFQAKHA 430

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497849|ref|XP_003635669.1| PREDICTED: phosphoserine aminotransferase, chloroplastic-like [Vitis vinifera]

 Score =  691 bits (1782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/438 (77%), Positives = 374/438 (85%), Gaps = 19/438 (4%)

Query: 1   MATTTSSPHSLFLQNRNSHP---LNKNNLASFTNLKKINFFNTK-----RAISVTCSAAS 52
           MAT TS P+SL LQN N        KN      N  ++N FN       ++IS+TCS A 
Sbjct: 1   MATATS-PNSLLLQNPNRSTTIHFRKN-----PNPARVNVFNLSPSRRNKSISITCSTAQ 54

Query: 53  APTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKE 112
               +R  +  QS   DRVFNFAAGPA LPE VL+KA+SELYNWRGSGMSVMEMSHRGKE
Sbjct: 55  V---ERPPSNAQS--LDRVFNFAAGPATLPENVLMKAESELYNWRGSGMSVMEMSHRGKE 109

Query: 113 FKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK 172
           F SII+KAESDLRALLNIP+EY+VLFLQGGAT+QFAA+PLNLC P+DPVDY+VTGSWGDK
Sbjct: 110 FMSIIQKAESDLRALLNIPEEYAVLFLQGGATSQFAAIPLNLCKPDDPVDYVVTGSWGDK 169

Query: 173 AFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAK 232
           AFKEAQKFC P VIWSGK+EKYTKIP+FD LEQNPDAKYLHICANETIHGVEFK+YP+ K
Sbjct: 170 AFKEAQKFCKPSVIWSGKSEKYTKIPSFDGLEQNPDAKYLHICANETIHGVEFKDYPTPK 229

Query: 233 NSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM 292
           N+  +L+ADMSSNFCSKPVDV++FG+IYAGAQKNVGPSGVTIVIVRKDL+GNAQ+ TP+M
Sbjct: 230 NNDRLLIADMSSNFCSKPVDVSKFGLIYAGAQKNVGPSGVTIVIVRKDLIGNAQEITPIM 289

Query: 293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG 352
            DYKIH ENNSLYNTPPCY IYMCGLVFE LL  GGL EVEK N KKA++LY+ ID SNG
Sbjct: 290 FDYKIHVENNSLYNTPPCYGIYMCGLVFEDLLAQGGLKEVEKKNIKKAQILYDAIDESNG 349

Query: 353 FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL 412
           FY+CPVEKSVRS MNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL
Sbjct: 350 FYRCPVEKSVRSLMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL 409

Query: 413 AGVEKLVAFMKDFQAKHA 430
           AGVEKLVAFMKDFQA+HA
Sbjct: 410 AGVEKLVAFMKDFQARHA 427

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502442|ref|XP_003520028.1| PREDICTED: phosphoserine aminotransferase, chloroplastic-like [Glycine max]

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/432 (75%), Positives = 360/432 (83%), Gaps = 7/432 (1%)

Query: 1   MATTTSSPHSLFL--QNRNSHPLNKNNLASFTNLKKINFFNTKRAISVTCSAASAPTQDR 58
           M++ ++SPHS  L  QN+N         ASFT   +       R IS+ C++  A  Q  
Sbjct: 1   MSSISTSPHSHLLLPQNQNHFLSESGTHASFTPSPR-----PFRPISIKCTSTPAQVQTH 55

Query: 59  TAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIE 118
                Q+  ++RVFNFAAGPA LPE VL +AQSEL+ WRGSGMSVMEMSHRGKEFKSIIE
Sbjct: 56  DPLPAQTRAQERVFNFAAGPATLPETVLRRAQSELHVWRGSGMSVMEMSHRGKEFKSIIE 115

Query: 119 KAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQ 178
           KAESDLR LL IP EYSVLFLQGGATTQFAAVPLNLC+P D VDYI+TGSW DKAFKEAQ
Sbjct: 116 KAESDLRTLLQIPSEYSVLFLQGGATTQFAAVPLNLCSPADAVDYIITGSWSDKAFKEAQ 175

Query: 179 KFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGIL 238
           KF  P +IWSGK EKYTK+P+F+AL+QNPDAKYLHICANETIHGVE+K YP+ KN   +L
Sbjct: 176 KFSKPTIIWSGKPEKYTKVPSFEALQQNPDAKYLHICANETIHGVEYKNYPTPKNPNAVL 235

Query: 239 VADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIH 298
           VADMSSNFCSKPVDV++FGVIYAGAQKNVGPSGVTIVI+R DL+G+AQ+ TP+MLDYKIH
Sbjct: 236 VADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRNDLIGHAQESTPIMLDYKIH 295

Query: 299 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV 358
            ENNSLYNTPPCY IYMCGLVFE LLE GGL EVEK N KKAE+LYN IDGSNGFYKCPV
Sbjct: 296 AENNSLYNTPPCYGIYMCGLVFEDLLEQGGLGEVEKKNVKKAEVLYNTIDGSNGFYKCPV 355

Query: 359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL 418
           EKSVRS MNVPFTLEK +LE EF+KEAAKE MVQLKGHRSVGGMRASIYNAMPLAGV+KL
Sbjct: 356 EKSVRSLMNVPFTLEKPELEGEFIKEAAKENMVQLKGHRSVGGMRASIYNAMPLAGVQKL 415

Query: 419 VAFMKDFQAKHA 430
           VAFMKDFQA+HA
Sbjct: 416 VAFMKDFQARHA 427

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497855|ref|XP_003635671.1| PREDICTED: phosphoserine aminotransferase, chloroplastic-like, partial [Vitis vinifera]

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/362 (86%), Positives = 339/362 (93%)

Query: 69  DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL 128
           DRVFNFAAGPA LPE VL+KA+SELYNWRGSGMSVMEMSHRGKEF SII+KAESDLRALL
Sbjct: 13  DRVFNFAAGPATLPENVLMKAESELYNWRGSGMSVMEMSHRGKEFMSIIQKAESDLRALL 72

Query: 129 NIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS 188
           NIP+EY+VLFLQGGAT+QFAA+PLNLC P+DPVDY+VTGSWGDKAFKEAQKFC P VIWS
Sbjct: 73  NIPEEYAVLFLQGGATSQFAAIPLNLCKPDDPVDYVVTGSWGDKAFKEAQKFCKPSVIWS 132

Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
           GK+EKYTKIP+FD LEQNPDAKYLHICANETIHGVEFK+YP+ KN+  +L+ADMSSNFCS
Sbjct: 133 GKSEKYTKIPSFDGLEQNPDAKYLHICANETIHGVEFKDYPTPKNNDRLLIADMSSNFCS 192

Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
           KPVDV++FG+IYAGAQKNVGPSGVTIVIVRKDL+GNAQ+ TP+M DYKIH ENNSLYNTP
Sbjct: 193 KPVDVSKFGLIYAGAQKNVGPSGVTIVIVRKDLIGNAQEITPIMFDYKIHVENNSLYNTP 252

Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           PCY IYMCGLVFE LL  GGL EVEK N KKA++LY+ ID SNGFY+CPVEKSVRS MNV
Sbjct: 253 PCYGIYMCGLVFEDLLAQGGLKEVEKKNIKKAQILYDAIDESNGFYRCPVEKSVRSLMNV 312

Query: 369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
           PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA+
Sbjct: 313 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAR 372

Query: 429 HA 430
           HA
Sbjct: 373 HA 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227876|ref|NP_179354.1| putative phosphoserine aminotransferase [Arabidopsis thaliana] gi|4926868|gb|AAD32948.1| putative phosphoserine aminotransferase [Arabidopsis thaliana] gi|66792614|gb|AAY56409.1| At2g17630 [Arabidopsis thaliana] gi|109134145|gb|ABG25070.1| At2g17630 [Arabidopsis thaliana] gi|330251565|gb|AEC06659.1| putative phosphoserine aminotransferase [Arabidopsis thaliana]

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/430 (74%), Positives = 360/430 (83%), Gaps = 15/430 (3%)

Query: 6   SSPHSLFLQNRNSHPLNK-----NNLASFTNLKKINFFNTKRAISVTCSAASAPTQDRTA 60
           +S +S  + N+   P  K      +   FT    IN     +++S+ C++AS        
Sbjct: 3   ASTNSFLIGNQTQIPSLKPKSISQSFIHFTKPNTINLTTRTKSVSIRCASASTTV----- 57

Query: 61  AQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKA 120
                G E RV NFAAGPA LPE VLLKAQS+LYNWRGSGMSVMEMSHRGKEF SII+KA
Sbjct: 58  -----GSEQRVINFAAGPAALPENVLLKAQSDLYNWRGSGMSVMEMSHRGKEFLSIIQKA 112

Query: 121 ESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF 180
           ESDLR LL IP EYSVLFLQGGATTQFAA+PLNLC  +D VDYIVTGSWGDKAFKEA+K+
Sbjct: 113 ESDLRQLLEIPSEYSVLFLQGGATTQFAALPLNLCKSDDSVDYIVTGSWGDKAFKEAKKY 172

Query: 181 CNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVA 240
           CNP+VIWSGK+EKYTK+P FD LEQ+ DAKYLHICANETIHGVEFK+YP  +N  G+L+A
Sbjct: 173 CNPKVIWSGKSEKYTKVPTFDGLEQSSDAKYLHICANETIHGVEFKDYPLVENPDGVLIA 232

Query: 241 DMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE 300
           DMSSNFCSKPVDV++FGVIYAGAQKNVGPSGVTIVI+RKDL+GNA+D TP+MLDYKIHDE
Sbjct: 233 DMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNARDITPVMLDYKIHDE 292

Query: 301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360
           N+SLYNTPPC+ IYMCGLVF+ LLE GGL EVEK N++KAELLYN ID S GF++CPVEK
Sbjct: 293 NSSLYNTPPCFGIYMCGLVFDDLLEQGGLKEVEKKNQRKAELLYNAIDESRGFFRCPVEK 352

Query: 361 SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 420
           SVRS MNVPFTLEKS+LEAEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA
Sbjct: 353 SVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 412

Query: 421 FMKDFQAKHA 430
           FMKDFQA+HA
Sbjct: 413 FMKDFQARHA 422

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110737825|dbj|BAF00851.1| putative phosphoserine aminotransferase [Arabidopsis thaliana]

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/430 (73%), Positives = 360/430 (83%), Gaps = 15/430 (3%)

Query: 6   SSPHSLFLQNRNSHPLNK-----NNLASFTNLKKINFFNTKRAISVTCSAASAPTQDRTA 60
           +S +S  + N+   P  K      +   FT    IN     +++S+ C++AS        
Sbjct: 3   ASTNSFLIGNQTQIPSLKPKSISQSFIHFTKPNTINLTTRTKSVSIRCASASTTV----- 57

Query: 61  AQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKA 120
                G E RV NFAAGPA LPE VLLKAQS+LYNWRGSGMSVMEMSHRGKEF SII+KA
Sbjct: 58  -----GSEQRVINFAAGPAALPENVLLKAQSDLYNWRGSGMSVMEMSHRGKEFLSIIQKA 112

Query: 121 ESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF 180
           ESDLR LL IP EYSVLFLQGGATTQFAA+PLNLC  +D VDYIVTGSWGDKAFKEA+K+
Sbjct: 113 ESDLRQLLEIPSEYSVLFLQGGATTQFAALPLNLCKSDDSVDYIVTGSWGDKAFKEAKKY 172

Query: 181 CNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVA 240
           CNP+VIWSGK+EKYTK+P FD LEQ+ DAKYLHICANETIHGVEFK+YP  +N  G+L+A
Sbjct: 173 CNPKVIWSGKSEKYTKVPTFDGLEQSSDAKYLHICANETIHGVEFKDYPLVENPDGVLIA 232

Query: 241 DMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE 300
           DMSSNFCSKPVDV++FGVIYAGAQKNVGPSGVTIVI+RKDL+GNA+D TP+MLDYKIHDE
Sbjct: 233 DMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNARDITPVMLDYKIHDE 292

Query: 301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360
           N+SLYNTPPC+ IYMCGLVF+ LLE GGL EVEK N++KAELLYN ID S GF++CP+EK
Sbjct: 293 NSSLYNTPPCFGIYMCGLVFDDLLEQGGLKEVEKKNQRKAELLYNAIDESRGFFRCPIEK 352

Query: 361 SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 420
           SVRS MNVPFTLEKS+LEAEF+K+AAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA
Sbjct: 353 SVRSLMNVPFTLEKSELEAEFIKKAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 412

Query: 421 FMKDFQAKHA 430
           FMKDFQA+HA
Sbjct: 413 FMKDFQARHA 422

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237069|ref|NP_195288.1| phosphoserine aminotransferase [Arabidopsis thaliana] gi|3914996|sp|Q96255.1|SERC_ARATH RecName: Full=Phosphoserine aminotransferase, chloroplastic; Short=PSAT; AltName: Full=Phosphohydroxythreonine aminotransferase; Flags: Precursor gi|1665831|dbj|BAA13640.1| phosphoserine aminotransferase [Arabidopsis thaliana] gi|2804260|dbj|BAA24441.1| phosphoserine aminotransferase [Arabidopsis thaliana] gi|3367581|emb|CAA20033.1| phosphoserine aminotransferase [Arabidopsis thaliana] gi|7270514|emb|CAB80279.1| phosphoserine aminotransferase [Arabidopsis thaliana] gi|109134169|gb|ABG25082.1| At4g35630 [Arabidopsis thaliana] gi|332661142|gb|AEE86542.1| phosphoserine aminotransferase [Arabidopsis thaliana]

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/437 (74%), Positives = 369/437 (84%), Gaps = 14/437 (3%)

Query: 1   MATTTSSPHSLFLQNRNSHPLN----KNNLASFTNLKK---INFFNTKRAISVTCSAASA 53
           MA TT+S    FL   N+  +     K++  SF +L K   +NF +  + ++V C A++ 
Sbjct: 1   MAATTNS----FLVGSNNTQIPALKPKSSSQSFLHLSKPNTVNFVSKTKPVAVRCVASTT 56

Query: 54  PTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEF 113
             QD   +    G ++RVFNFAAGPA LPE VLLKAQ++LYNWRGSGMSVMEMSHRGKEF
Sbjct: 57  QVQDGVRSG-SVGSQERVFNFAAGPATLPENVLLKAQADLYNWRGSGMSVMEMSHRGKEF 115

Query: 114 KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA 173
            SII+KAESDLR LL IPQEYSVLFLQGGATTQFAA+PLNLC  +D VD++VTGSWGDKA
Sbjct: 116 LSIIQKAESDLRQLLEIPQEYSVLFLQGGATTQFAALPLNLCKSDDTVDFVVTGSWGDKA 175

Query: 174 FKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKN 233
            KEA+K+C   VIWSGK+EKYTK+P+F+ LEQ PDAKYLHICANETIHGVEFK+YP  KN
Sbjct: 176 VKEAKKYCKTNVIWSGKSEKYTKVPSFEELEQTPDAKYLHICANETIHGVEFKDYPVPKN 235

Query: 234 STGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLML 293
             G LVADMSSNFCSKPVDV++FGVIY GAQKNVGPSGVTIVI+RKDL+GNAQD TP+ML
Sbjct: 236 --GFLVADMSSNFCSKPVDVSKFGVIYGGAQKNVGPSGVTIVIIRKDLIGNAQDITPVML 293

Query: 294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF 353
           DYKIHDEN+SLYNTPPC+ IYMCGLVFE LLE GGL EVEK N++KA+LLYN I+ SNGF
Sbjct: 294 DYKIHDENSSLYNTPPCFGIYMCGLVFEDLLEQGGLKEVEKKNQRKADLLYNAIEESNGF 353

Query: 354 YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413
           ++CPVEKSVRS MNVPFTLEKS+LEAEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 354 FRCPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413

Query: 414 GVEKLVAFMKDFQAKHA 430
           GVEKLVAFMKDFQAKHA
Sbjct: 414 GVEKLVAFMKDFQAKHA 430

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22135922|gb|AAM91543.1| phosphoserine aminotransferase [Arabidopsis thaliana]

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/437 (74%), Positives = 368/437 (84%), Gaps = 14/437 (3%)

Query: 1   MATTTSSPHSLFLQNRNSHPLN----KNNLASFTNLKK---INFFNTKRAISVTCSAASA 53
           MA TT+S    FL   N+  +     K++  SF +L K   +NF +  + ++V C A++ 
Sbjct: 1   MAATTNS----FLVGSNNTQIPALKPKSSSQSFLHLSKPNTVNFVSKTKPVAVRCVASTT 56

Query: 54  PTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEF 113
             QD   +    G ++RVFNFAAGPA LPE VLLKAQ++LYNWRGSGMSVMEMSHRGKEF
Sbjct: 57  QVQDGVRSG-SVGSQERVFNFAAGPATLPENVLLKAQADLYNWRGSGMSVMEMSHRGKEF 115

Query: 114 KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA 173
            SII KAESDLR LL IPQEYSVLFLQGGATTQFAA+PLNLC  +D VD++VTGSWGDKA
Sbjct: 116 LSIIRKAESDLRQLLEIPQEYSVLFLQGGATTQFAALPLNLCKSDDTVDFVVTGSWGDKA 175

Query: 174 FKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKN 233
            KEA+K+C   VIWSGK+EKYTK+P+F+ LEQ PDAKYLHICANETIHGVEFK+YP  KN
Sbjct: 176 VKEAKKYCKTNVIWSGKSEKYTKVPSFEELEQTPDAKYLHICANETIHGVEFKDYPVPKN 235

Query: 234 STGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLML 293
             G LVADMSSNFCSKPVDV++FGVIY GAQKNVGPSGVTIVI+RKDL+GNAQD TP+ML
Sbjct: 236 --GFLVADMSSNFCSKPVDVSKFGVIYGGAQKNVGPSGVTIVIIRKDLIGNAQDITPVML 293

Query: 294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF 353
           DYKIHDEN+SLYNTPPC+ IYMCGLVFE LLE GGL EVEK N++KA+LLYN I+ SNGF
Sbjct: 294 DYKIHDENSSLYNTPPCFGIYMCGLVFEDLLEQGGLKEVEKKNQRKADLLYNAIEESNGF 353

Query: 354 YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413
           ++CPVEKSVRS MNVPFTLEKS+LEAEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 354 FRCPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413

Query: 414 GVEKLVAFMKDFQAKHA 430
           GVEKLVAFMKDFQAKHA
Sbjct: 414 GVEKLVAFMKDFQAKHA 430

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832380|ref|XP_002884072.1| hypothetical protein ARALYDRAFT_900110 [Arabidopsis lyrata subsp. lyrata] gi|297329912|gb|EFH60331.1| hypothetical protein ARALYDRAFT_900110 [Arabidopsis lyrata subsp. lyrata]

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/430 (74%), Positives = 357/430 (83%), Gaps = 17/430 (3%)

Query: 6   SSPHSLFLQNRNSHPLNK-----NNLASFTNLKKINFFNTKRAISVTCSAASAPTQDRTA 60
           +S +S  + N+   P  K      +   FT    IN      +IS+ C++ +        
Sbjct: 3   ASTNSFLIGNQTQIPSLKPKSISQSFIHFTKPNTINLTTRTTSISIRCASTTV------- 55

Query: 61  AQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKA 120
                G E RVFNFAAGPA LPE VLLKAQS+LYNWRGSGMSVMEMSHRGKEF SII+KA
Sbjct: 56  -----GSEQRVFNFAAGPAALPENVLLKAQSDLYNWRGSGMSVMEMSHRGKEFLSIIQKA 110

Query: 121 ESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF 180
           ESDLR LL IP EYSVLFLQGGATTQFAA+PLNLC  +D VDYIVTGSWGDKAFKEA+K+
Sbjct: 111 ESDLRQLLEIPSEYSVLFLQGGATTQFAALPLNLCKSDDSVDYIVTGSWGDKAFKEAKKY 170

Query: 181 CNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVA 240
           CNP+VIWSGK+EKYTK+P+FD LEQ   AKYLHICANETIHGVEFK+YP  KN  GIL+A
Sbjct: 171 CNPKVIWSGKSEKYTKVPSFDGLEQTSHAKYLHICANETIHGVEFKDYPVVKNPDGILIA 230

Query: 241 DMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE 300
           DMSSNFCSKPVDV++FGVIYAGAQKNVGPSGVTIVI+RKDL+GNA+D TP+MLDYKIHDE
Sbjct: 231 DMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNARDITPVMLDYKIHDE 290

Query: 301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360
           N+SLYNTPPC+ IYMCGLVF+ LLE GGL EVEK N++KA LLYN ID S GF++CPVEK
Sbjct: 291 NSSLYNTPPCFGIYMCGLVFDDLLEQGGLKEVEKKNQRKAMLLYNAIDESRGFFRCPVEK 350

Query: 361 SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 420
           SVRS MNVPFTLEKS+LEAEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA
Sbjct: 351 SVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 410

Query: 421 FMKDFQAKHA 430
           FMKDFQA+HA
Sbjct: 411 FMKDFQARHA 420

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592931|gb|AAM64881.1| phosphoserine aminotransferase [Arabidopsis thaliana]

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/437 (73%), Positives = 369/437 (84%), Gaps = 14/437 (3%)

Query: 1   MATTTSSPHSLFLQNRNSHPLN----KNNLASFTNLKK---INFFNTKRAISVTCSAASA 53
           MA TT+S    FL   N+  +     K++  SF +L K   +NF +  + ++V C A++ 
Sbjct: 1   MAATTNS----FLVGSNNTQIPALKPKSSSQSFLHLSKPNTVNFASKTKPVAVRCVASTT 56

Query: 54  PTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEF 113
             QD   +    G ++RVFNFAAGPA LPE VLLKAQ++LYNWRGSGMSVMEMSHRGKEF
Sbjct: 57  QVQDGVRSG-SVGSQERVFNFAAGPATLPENVLLKAQADLYNWRGSGMSVMEMSHRGKEF 115

Query: 114 KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA 173
            SII+KAESDLR LL IPQEYSVLFLQGGATTQFAA+PLNLC  +D VD++VTGSWGDKA
Sbjct: 116 LSIIQKAESDLRQLLEIPQEYSVLFLQGGATTQFAALPLNLCKSDDTVDFVVTGSWGDKA 175

Query: 174 FKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKN 233
            KEA+K+C   VIWSGK+EKYTK+P+F+ LEQ PDAKYLHICANETIHGVEFK+YP  KN
Sbjct: 176 VKEAKKYCKTNVIWSGKSEKYTKVPSFEELEQTPDAKYLHICANETIHGVEFKDYPVPKN 235

Query: 234 STGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLML 293
             G LVADMSSNFCSKPVDV++FGVIY GAQKNVGPSGVTIVI+RKDL+GNAQD TP+ML
Sbjct: 236 --GFLVADMSSNFCSKPVDVSKFGVIYGGAQKNVGPSGVTIVIIRKDLIGNAQDITPVML 293

Query: 294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF 353
           DYKIHDEN+SLYNTPPC+ IYMCGLVFE LLE GGL EVEK N++KA+LLYN I+ SNGF
Sbjct: 294 DYKIHDENSSLYNTPPCFGIYMCGLVFEDLLEQGGLKEVEKKNQRKADLLYNAIEESNGF 353

Query: 354 YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413
           ++CPVEKSVRS MNVPFTLEKS+LEAEF+KEAAKEKMVQLKGHRSVGGMRASIYNAMPLA
Sbjct: 354 FRCPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413

Query: 414 GVEKLVAFMKDFQAKHA 430
           GVEKLVAF+KDFQAKHA
Sbjct: 414 GVEKLVAFIKDFQAKHA 430

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	430
TAIR|locus:2127963	430	PSAT "phosphoserine aminotrans	0.988	0.988	0.719	4.3e-164
TAIR|locus:2057259	422	AT2G17630 [Arabidopsis thalian	0.969	0.988	0.733	7.1e-164
UNIPROTKB|P52877	430	P52877 "Phosphoserine aminotra	0.988	0.988	0.695	4.4e-155
ZFIN|ZDB-GENE-030131-5723	368	psat1 "phosphoserine aminotran	0.837	0.978	0.498	1.1e-96
UNIPROTKB|A6QR28	370	PSAT1 "Phosphoserine aminotran	0.827	0.962	0.517	3.8e-94
UNIPROTKB|E2RDN1	411	PSAT1 "Phosphoserine aminotran	0.867	0.907	0.501	4.8e-94
MGI|MGI:2183441	370	Psat1 "phosphoserine aminotran	0.830	0.964	0.510	7.8e-94
UNIPROTKB|E9PSV5	370	Psat1 "Protein Psat1" [Rattus	0.830	0.964	0.510	2.1e-93
UNIPROTKB|F1NTK1	366	PSAT1 "Phosphoserine aminotran	0.830	0.975	0.508	1.5e-92
UNIPROTKB|Q9Y617	370	PSAT1 "Phosphoserine aminotran	0.830	0.964	0.513	1.5e-92

TAIR|locus:2127963 PSAT "phosphoserine aminotransferase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1597 (567.2 bits), Expect = 4.3e-164, P = 4.3e-164
 Identities = 313/435 (71%), Positives = 355/435 (81%)

Query:     1 MATTTSSPHSLFLQNRNSHPL--NKNNLASFTNLKK---INFFNTKRAISVTCSAASAPT 55
             MA TT+S   L   N    P    K++  SF +L K   +NF +  + ++V C A++   
Sbjct:     1 MAATTNS--FLVGSNNTQIPALKPKSSSQSFLHLSKPNTVNFVSKTKPVAVRCVASTTQV 58

Query:    56 QDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKS 115
             QD   +    G ++RVFNFAAGPA LPE VLLKAQ++LYNWRGSGMSVMEMSHRGKEF S
Sbjct:    59 QDGVRSG-SVGSQERVFNFAAGPATLPENVLLKAQADLYNWRGSGMSVMEMSHRGKEFLS 117

Query:   116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFK 175
             II+KAESDLR LL IPQEYSVLFLQGGATTQFAA+PLNLC  +D VD++VTGSWGDKA K
Sbjct:   118 IIQKAESDLRQLLEIPQEYSVLFLQGGATTQFAALPLNLCKSDDTVDFVVTGSWGDKAVK 177

Query:   176 EAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNST 235
             EA+K+C   VIWSGK+EKYTK+P+F+ LEQ PDAKYLHICANETIHGVEFK+YP  KN  
Sbjct:   178 EAKKYCKTNVIWSGKSEKYTKVPSFEELEQTPDAKYLHICANETIHGVEFKDYPVPKN-- 235

Query:   236 GILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDY 295
             G LVADMSSNFCSKPVDV++FGVIY GAQKNVGPSGVTIVI+RKDL+GNAQD TP+MLDY
Sbjct:   236 GFLVADMSSNFCSKPVDVSKFGVIYGGAQKNVGPSGVTIVIIRKDLIGNAQDITPVMLDY 295

Query:   296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYK 355
             KIHDEN+SLYNTPPC+ IYMCGLVFE LLE GGL EVEK N++KA+LLYN I+ SNGF++
Sbjct:   296 KIHDENSSLYNTPPCFGIYMCGLVFEDLLEQGGLKEVEKKNQRKADLLYNAIEESNGFFR 355

Query:   356 CPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGV 415
             CPVEKSVRS MNVPFTLEKS+L            MVQLKGHRSVGGMRASIYNAMPLAGV
Sbjct:   356 CPVEKSVRSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV 415

Query:   416 EKLVAFMKDFQAKHA 430
             EKLVAFMKDFQAKHA
Sbjct:   416 EKLVAFMKDFQAKHA 430

GO:0003824 "catalytic activity" evidence=IEA

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IEA;IGI;ISS;IDA

GO:0006564 "L-serine biosynthetic process" evidence=IEA;ISS;TAS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2057259 AT2G17630 [Arabidopsis thaliana (taxid:3702)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 314/428 (73%), Positives = 352/428 (82%)

Query:     6 SSPHSLFLQNRNSHP-LNKNNLA-SFTNLKKINFFN-TKRAISVTCSAASAPTQDRTAAQ 62
             +S +S  + N+   P L   +++ SF +  K N  N T R  SV+   ASA T   T   
Sbjct:     3 ASTNSFLIGNQTQIPSLKPKSISQSFIHFTKPNTINLTTRTKSVSIRCASAST---TV-- 57

Query:    63 IQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAES 122
                G E RV NFAAGPA LPE VLLKAQS+LYNWRGSGMSVMEMSHRGKEF SII+KAES
Sbjct:    58 ---GSEQRVINFAAGPAALPENVLLKAQSDLYNWRGSGMSVMEMSHRGKEFLSIIQKAES 114

Query:   123 DLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCN 182
             DLR LL IP EYSVLFLQGGATTQFAA+PLNLC  +D VDYIVTGSWGDKAFKEA+K+CN
Sbjct:   115 DLRQLLEIPSEYSVLFLQGGATTQFAALPLNLCKSDDSVDYIVTGSWGDKAFKEAKKYCN 174

Query:   183 PQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADM 242
             P+VIWSGK+EKYTK+P FD LEQ+ DAKYLHICANETIHGVEFK+YP  +N  G+L+ADM
Sbjct:   175 PKVIWSGKSEKYTKVPTFDGLEQSSDAKYLHICANETIHGVEFKDYPLVENPDGVLIADM 234

Query:   243 SSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENN 302
             SSNFCSKPVDV++FGVIYAGAQKNVGPSGVTIVI+RKDL+GNA+D TP+MLDYKIHDEN+
Sbjct:   235 SSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNARDITPVMLDYKIHDENS 294

Query:   303 SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV 362
             SLYNTPPC+ IYMCGLVF+ LLE GGL EVEK N++KAELLYN ID S GF++CPVEKSV
Sbjct:   295 SLYNTPPCFGIYMCGLVFDDLLEQGGLKEVEKKNQRKAELLYNAIDESRGFFRCPVEKSV 354

Query:   363 RSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM 422
             RS MNVPFTLEKS+L            MVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM
Sbjct:   355 RSLMNVPFTLEKSELEAEFIKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM 414

Query:   423 KDFQAKHA 430
             KDFQA+HA
Sbjct:   415 KDFQARHA 422

GO:0003824 "catalytic activity" evidence=IEA

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IEA;ISS

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

UNIPROTKB|P52877 P52877 "Phosphoserine aminotransferase, chloroplastic" [Spinacia oleracea (taxid:3562)]

 Score = 1512 (537.3 bits), Expect = 4.4e-155, P = 4.4e-155
 Identities = 301/433 (69%), Positives = 337/433 (77%)

Query:     1 MATTTSSPHSLFLQNRNSHPLNKNNLASFTNLKKINFFNTKRAIS-VTCSAASAPTQDRT 59
             MA T+S+  +LFL+     P N       T+   +NF   +  IS +TCSA    T   T
Sbjct:     3 MAATSSTQTNLFLKA----PFNPQQNCQQTHFLPLNF-KIRNPISRITCSATPTATAVST 57

Query:    60 AAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEK 119
               +I    E+RVFNFAAGPA LPE VL KAQSEL NWRGSGMSVMEMSHRGKEF SII+K
Sbjct:    58 TTKIDQRSEERVFNFAAGPAVLPENVLQKAQSELLNWRGSGMSVMEMSHRGKEFTSIIDK 117

Query:   120 AESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQK 179
             AE+DLR LLNIP +Y+VLFLQGGA+TQF+A+PLNLCTP+  VDYIVTGSWGDKA KEA K
Sbjct:   118 AEADLRTLLNIPSDYTVLFLQGGASTQFSAIPLNLCTPDSAVDYIVTGSWGDKAAKEAAK 177

Query:   180 FCNPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFKEYPSAKNSTGI 237
             +     IWSGK++ Y +IPNFD  E  QN  A+YLHICANETI+GVEFK+YP   N  G 
Sbjct:   178 YAAVSSIWSGKSDNYVRIPNFDGSEFVQNSQARYLHICANETIYGVEFKKYPVPANPDGF 237

Query:   238 LVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI 297
             LVADMSSNFCSKPVDVT+FG+IYAGAQKNVGPSGVTIVIVR DL+GNAQ  TP+MLDYKI
Sbjct:   238 LVADMSSNFCSKPVDVTKFGLIYAGAQKNVGPSGVTIVIVRNDLIGNAQKMTPVMLDYKI 297

Query:   298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP 357
             H +N SLYNTPPCY IYMCGLVFE LL  GGL EVEK N+ KA++LY+ ID SNGFYKCP
Sbjct:   298 HADNKSLYNTPPCYGIYMCGLVFEDLLNQGGLVEVEKKNKAKAQVLYDAIDESNGFYKCP 357

Query:   358 VEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEK 417
             VEKSVRS MNVPFTLEKS+L            MV LKGHRSVGGMRASIYNAMPLAGVEK
Sbjct:   358 VEKSVRSLMNVPFTLEKSELEGDFIKEAAKEKMVALKGHRSVGGMRASIYNAMPLAGVEK 417

Query:   418 LVAFMKDFQAKHA 430
             LVAFMK+FQAKHA
Sbjct:   418 LVAFMKEFQAKHA 430

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0006563 "L-serine metabolic process" evidence=IGI

ZFIN|ZDB-GENE-030131-5723 psat1 "phosphoserine aminotransferase 1" [Danio rerio (taxid:7955)]

 Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
 Identities = 184/369 (49%), Positives = 257/369 (69%)

Query:    67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRA 126
             ++ +  NF AGPA LP+ VLL+AQ EL ++ G+G+S++EMSHR  +F  II   E+ +R 
Sbjct:     2 EKKQTVNFGAGPAKLPQSVLLQAQKELLDYSGTGISILEMSHRSSDFTKIINTTENLIRE 61

Query:   127 LLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDP--VDYIVTGSWGDKAFKEAQKFCNPQ 184
             LLN+P+ Y +LFLQGG + QF+AVPLNL    +    DY+VTG+W  +A KEA+K+    
Sbjct:    62 LLNVPENYKILFLQGGGSGQFSAVPLNLIGLKEERCADYLVTGTWSARAAKEAEKYGKVN 121

Query:   185 VIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSS 244
             VI   K + YTKIP+      NP A Y++ C NET+HGVEF   P  K    ILV+DMSS
Sbjct:   122 VIHP-KLDSYTKIPDSSTWSLNPSASYVYYCCNETVHGVEFNFIPDTKGV--ILVSDMSS 178

Query:   245 NFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSL 304
             NF S+PVDV++FG+I+AGAQKNVG +GVT+VIVR+DL+G A  + P++LDY++   NNSL
Sbjct:   179 NFLSRPVDVSKFGLIFAGAQKNVGCAGVTVVIVREDLIGKALKECPIILDYQVQAGNNSL 238

Query:   305 YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS 364
             YNTPPC+ IY+ GLV E++   GG + +E++N++K+ L+Y++I+ SNGFY CPV+ + RS
Sbjct:   239 YNTPPCFSIYIMGLVLEWIRNNGGADAMERLNKQKSALVYDIINRSNGFYSCPVDAACRS 298

Query:   365 FMNVPFTLEKSD----LXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 420
              MN+PF + K +    L            M+ LKGHRSVGG+RAS+YNA+ +  V+ L A
Sbjct:   299 RMNIPFRIGKKEGDESLEKSFLDGASKLGMISLKGHRSVGGIRASLYNAVTVEDVKILAA 358

Query:   421 FMKDFQAKH 429
             +M+DF   H
Sbjct:   359 YMEDFLRNH 367

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

UNIPROTKB|A6QR28 PSAT1 "Phosphoserine aminotransferase" [Bos taurus (taxid:9913)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 189/365 (51%), Positives = 244/365 (66%)

Query:    71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI 130
             V NF  GPA LP  VLL+ Q EL +++G G+SV+EMSHR  +F  II K E+ +R LL I
Sbjct:     7 VVNFGPGPAKLPRSVLLEMQKELLDYKGIGISVLEMSHRSSDFSKIINKTETLVRELLAI 66

Query:   131 PQEYSVLFLQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS 188
             P  Y V+F+QGG   QF+AVPLNL         DY+VTGSW  KA +EA+KF    ++  
Sbjct:    67 PDNYKVIFVQGGGCGQFSAVPLNLIGLKAGRCADYVVTGSWSAKAAEEAKKFGTVNIVHP 126

Query:   189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
              K   YTKIP+      NPDA Y++ CANET+HGVEF   P  K +  +LV DMSSNF S
Sbjct:   127 -KLGSYTKIPDPSTWTLNPDASYVYYCANETVHGVEFDFIPDVKGA--VLVCDMSSNFLS 183

Query:   249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
             +PVDV++FGVI+AGAQKNVG +GVT+VI+R DLLG A  + P +LDYK+   NNSLYNTP
Sbjct:   184 RPVDVSKFGVIFAGAQKNVGSAGVTVVIIRDDLLGFALKECPSVLDYKVQAGNNSLYNTP 243

Query:   309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
             PC+ IY+ GLV E++   GG   +EK++  K++++Y++ID S GFY CPVE   RS MN+
Sbjct:   244 PCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQMIYDIIDNSQGFYVCPVEPQNRSKMNI 303

Query:   369 PFTL--EKSD--LXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD 424
             PF +   K D  L            M+ LKGHRSVGG+R S+YNA+ +  V+KL AFMK+
Sbjct:   304 PFRIGNTKGDDALEKRFLDKALELNMISLKGHRSVGGIRVSLYNAVTVEDVQKLAAFMKN 363

Query:   425 FQAKH 429
             F   H
Sbjct:   364 FLEMH 368

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|E2RDN1 PSAT1 "Phosphoserine aminotransferase" [Canis lupus familiaris (taxid:9615)]

 Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
 Identities = 192/383 (50%), Positives = 253/383 (66%)

Query:    53 APTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKE 112
             +P   R   +  S    +V NF  GPA LP  VLL+ Q EL +++G G+SV+EMSHR  +
Sbjct:    31 SPPPRRLRCRTMSAPR-QVVNFGPGPAKLPRSVLLEIQKELLDYKGIGISVLEMSHRSSD 89

Query:   113 FKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDP--VDYIVTGSWG 170
             F  II  AE+ +R LL +P  Y V+F+QGG + QF+AVPLNL +       DY+VTGSW 
Sbjct:    90 FAKIINNAENLVRELLAVPDNYKVIFVQGGGSGQFSAVPLNLISRKAGRCADYVVTGSWS 149

Query:   171 DKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPS 230
              KA +EA+KF    V+   K   YTKIP+      +PDA Y++ CANET+HGVEF   P 
Sbjct:   150 AKAAEEAKKFGTVNVVHP-KLGSYTKIPDPSTWNLSPDASYVYYCANETVHGVEFDFIPD 208

Query:   231 AKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTP 290
              K +  +LV DMSSNF SKPVDV++FGVI+AGAQKNVG +GVTIVI+R DLLG A  + P
Sbjct:   209 VKGA--VLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTIVIIRDDLLGFALRECP 266

Query:   291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS 350
              +L+YK+   N+SLYNTPPC+ IY+ GLV E++   GG   +EK++  K++++Y++ID S
Sbjct:   267 SVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQMIYDIIDNS 326

Query:   351 NGFYKCPVEKSVRSFMNVPFTL--EKSD--LXXXXXXXXXXXXMVQLKGHRSVGGMRASI 406
              GFY CPVE   RS MN+PF +   K D  L            M+ LKGHRSVGG+RAS+
Sbjct:   327 QGFYVCPVETKNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMISLKGHRSVGGIRASL 386

Query:   407 YNAMPLAGVEKLVAFMKDFQAKH 429
             YNA+ +  V+KL AFMK+F   H
Sbjct:   387 YNAVTIEDVQKLAAFMKNFLEMH 409

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

MGI|MGI:2183441 Psat1 "phosphoserine aminotransferase 1" [Mus musculus (taxid:10090)]

 Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
 Identities = 187/366 (51%), Positives = 245/366 (66%)

Query:    70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
             +V NF  GPA LP  VLL+ Q +L ++RG G+SV+EMSHR  +F  II   E+ +R LL 
Sbjct:     6 QVVNFGPGPAKLPHSVLLEIQKQLLDYRGLGISVLEMSHRSSDFAKIIGNTENLVRELLA 65

Query:   130 IPQEYSVLFLQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIW 187
             +P  Y V+F+QGG + QF+AVPLNL         DY+VTG+W  KA +EA+KF    ++ 
Sbjct:    66 VPNNYKVIFVQGGGSGQFSAVPLNLIGLKAGRSADYVVTGAWSAKAAEEAKKFGTVNIVH 125

Query:   188 SGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFC 247
               K   YTKIP+      NPDA Y++ CANET+HGVEF   P  K +  +LV DMSSNF 
Sbjct:   126 P-KLGSYTKIPDPSTWNLNPDASYVYFCANETVHGVEFDFVPDVKGA--VLVCDMSSNFL 182

Query:   248 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT 307
             S+PVDV++FGVI+AGAQKNVG +GVT+VIVR DLLG +  + P +LDYK+   NNSLYNT
Sbjct:   183 SRPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFSLRECPSVLDYKVQAGNNSLYNT 242

Query:   308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367
             PPC+ IY+ G+V E++   GG   +EK++  K++++Y +ID S GFY CPVE+  RS MN
Sbjct:   243 PPCFSIYVMGMVLEWIKNNGGAAAMEKLSSIKSQMIYEIIDNSQGFYVCPVERQNRSRMN 302

Query:   368 VPFTL--EKSD--LXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK 423
             +PF +   K D  L            M+ LKGHRSVGG+RAS+YNA+    VEKL AFMK
Sbjct:   303 IPFRIGNAKGDEALEKRFLDKAVELNMISLKGHRSVGGIRASLYNAVTTEDVEKLAAFMK 362

Query:   424 DFQAKH 429
             +F   H
Sbjct:   363 NFLEMH 368

GO:0003824 "catalytic activity" evidence=IEA

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0008652 "cellular amino acid biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|E9PSV5 Psat1 "Protein Psat1" [Rattus norvegicus (taxid:10116)]

 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 187/366 (51%), Positives = 244/366 (66%)

Query:    70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
             +V NF  GPA LP  VLL+ Q +L +++G G+SV+EMSHR  +F  II   E+ +R LL 
Sbjct:     6 QVVNFGPGPAKLPYSVLLEIQKQLLDYKGLGISVLEMSHRSPDFAKIISNTENLVRELLA 65

Query:   130 IPQEYSVLFLQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIW 187
             +P  Y V+F+QGG T QF+AVPLNL         DY+VTG+W  KA +EA+KF    ++ 
Sbjct:    66 VPNNYKVIFVQGGGTGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTVNIVH 125

Query:   188 SGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFC 247
               K   YTKIP+      NPDA Y++ CANET+HGVEF   P  K +  +LV DMSSNF 
Sbjct:   126 P-KLGSYTKIPDPSTWNLNPDASYVYFCANETVHGVEFDFIPDVKGA--VLVCDMSSNFL 182

Query:   248 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT 307
             S+PVDV++FGVI+AGAQKNVG +GVT+VIVR DLLG A  + P +LDYK+   NNSLYNT
Sbjct:   183 SRPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLDYKVQAGNNSLYNT 242

Query:   308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367
             PPC+ IY+  +V E++   GG   +EK++  K++++Y +ID S GFY CPVE+  RS MN
Sbjct:   243 PPCFSIYVMDMVLEWIKNNGGAAAMEKLSSVKSQMIYEIIDNSQGFYVCPVERQNRSRMN 302

Query:   368 VPFTL--EKSD--LXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK 423
             +PF +   K D  L            M+ LKGHRSVGG+RAS+YNA+    VEKL AFMK
Sbjct:   303 IPFRIGNSKGDEALEKRFLDKAVELNMISLKGHRSVGGIRASLYNAVTTEDVEKLAAFMK 362

Query:   424 DFQAKH 429
             +F   H
Sbjct:   363 NFLEMH 368

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|F1NTK1 PSAT1 "Phosphoserine aminotransferase" [Gallus gallus (taxid:9031)]

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 186/366 (50%), Positives = 244/366 (66%)

Query:    70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
             R  N   GPA  P  VLL AQ EL +++G G+SV+EMSHR  +F  I+  AE+ LR LLN
Sbjct:     3 RAANRRGGPAAAPPMVLLAAQKELVDYKGLGISVLEMSHRTSDFSKILNTAENLLRELLN 62

Query:   130 IPQEYSVLFLQGGATTQFAAVPLNLCTPND--PVDYIVTGSWGDKAFKEAQKFCNPQVIW 187
             +P+ Y ++FLQGG + QF+AVPLNL    +    DY+VTG+W  KA KEA+K+    ++ 
Sbjct:    63 VPENYKIIFLQGGGSGQFSAVPLNLIGLKEGRQADYVVTGAWSAKAAKEAEKYAKVNIVH 122

Query:   188 SGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFC 247
               K   YT IP+      NPDA Y++ CANET+HGVEF   P  K +  +LV DMSSNF 
Sbjct:   123 P-KLSAYTSIPDPGTWNLNPDASYVYYCANETVHGVEFDFVPDVKGA--VLVCDMSSNFL 179

Query:   248 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT 307
             S+PVDV++FGVI+AGAQKNVG +GVT+VIVR+DLLG A  + P+++DYK    N SLYNT
Sbjct:   180 SRPVDVSKFGVIFAGAQKNVGCAGVTVVIVREDLLGFALKECPVVMDYKTQAVNGSLYNT 239

Query:   308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367
             PPCY IY+ GLV E++   GG   ++K++  K+ ++Y++ID SNGFY CPVEK  RS MN
Sbjct:   240 PPCYSIYIMGLVLEWIKNNGGAAAMDKLSLIKSRMIYDIIDKSNGFYVCPVEKKNRSRMN 299

Query:   368 VPFTLE--KSD--LXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK 423
             VPF +   K D  L            M+ LKG RSVGG+RAS+YNA+ +  V+KL  FM+
Sbjct:   300 VPFRIGSIKGDEALEKKFLEKAVEKNMISLKGFRSVGGIRASLYNAVTVEDVQKLATFMR 359

Query:   424 DFQAKH 429
              F   H
Sbjct:   360 SFMQMH 365

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=IEA

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=IEA

UNIPROTKB|Q9Y617 PSAT1 "Phosphoserine aminotransferase" [Homo sapiens (taxid:9606)]

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 188/366 (51%), Positives = 242/366 (66%)

Query:    70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
             +V NF  GPA LP  VLL+ Q EL +++G G+SV+EMSHR  +F  II   E+ +R LL 
Sbjct:     6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65

Query:   130 IPQEYSVLFLQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIW 187
             +P  Y V+FLQGG   QF+AVPLNL         DY+VTG+W  KA +EA+KF    ++ 
Sbjct:    66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125

Query:   188 SGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFC 247
               K   YTKIP+      NPDA Y++ CANET+HGVEF   P  K +  +LV DMSSNF 
Sbjct:   126 P-KLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGA--VLVCDMSSNFL 182

Query:   248 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT 307
             SKPVDV++FGVI+AGAQKNVG +GVT+VIVR DLLG A  + P +L+YK+   N+SLYNT
Sbjct:   183 SKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNT 242

Query:   308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367
             PPC+ IY+ GLV E++   GG   +EK++  K++ +Y +ID S GFY CPVE   RS MN
Sbjct:   243 PPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMN 302

Query:   368 VPFTL--EKSD--LXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK 423
             +PF +   K D  L            M+ LKGHRSVGG+RAS+YNA+ +  V+KL AFMK
Sbjct:   303 IPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMK 362

Query:   424 DFQAKH 429
              F   H
Sbjct:   363 KFLEMH 368

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006564 "L-serine biosynthetic process" evidence=NAS;TAS

GO:0004648 "O-phospho-L-serine:2-oxoglutarate aminotransferase activity" evidence=NAS;TAS

GO:0008615 "pyridoxine biosynthetic process" evidence=NAS

GO:0005829 "cytosol" evidence=TAS

GO:0008652 "cellular amino acid biosynthetic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8Y0Z0	SERC_RALSO	2, ., 6, ., 1, ., 5, 2	0.5067	0.8418	0.9576	yes	no
B7V9J9	SERC_PSEA8	2, ., 6, ., 1, ., 5, 2	0.5290	0.8325	0.9916	yes	no
B4SP45	SERC_STRM5	2, ., 6, ., 1, ., 5, 2	0.5138	0.8325	0.9916	yes	no
Q81BC0	SERC_BACCR	2, ., 6, ., 1, ., 5, 2	0.5124	0.8325	0.9944	yes	no
Q9HZ66	SERC_PSEAE	2, ., 6, ., 1, ., 5, 2	0.5263	0.8325	0.9916	yes	no
Q6HGI0	SERC_BACHK	2, ., 6, ., 1, ., 5, 2	0.5124	0.8325	0.9944	yes	no
A4JCH1	SERC_BURVG	2, ., 6, ., 1, ., 5, 2	0.5303	0.8325	0.9944	yes	no
Q8ZGB4	SERC_YERPE	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9916	yes	no
Q7NVP1	SERC_CHRVO	2, ., 6, ., 1, ., 5, 2	0.5290	0.8372	0.9944	yes	no
A9ADV9	SERC_BURM1	2, ., 6, ., 1, ., 5, 2	0.5276	0.8325	0.9944	yes	no
Q1IDA2	SERC_PSEE4	2, ., 6, ., 1, ., 5, 2	0.5207	0.8325	0.9916	yes	no
C1D8N3	SERC_LARHH	2, ., 6, ., 1, ., 5, 2	0.5595	0.8279	0.9916	yes	no
Q12CL3	SERC_POLSJ	2, ., 6, ., 1, ., 5, 2	0.5081	0.8348	0.9755	yes	no
Q6F961	SERC_ACIAD	2, ., 6, ., 1, ., 5, 2	0.5138	0.8302	0.9944	yes	no
Q66CI9	SERC_YERPS	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9916	yes	no
B1JXR6	SERC_BURCC	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9944	yes	no
Q820S0	SERC_NITEU	2, ., 6, ., 1, ., 5, 2	0.5367	0.8372	0.9782	yes	no
Q96255	SERC_ARATH	2, ., 6, ., 1, ., 5, 2	0.7414	0.9837	0.9837	no	no
Q0BH96	SERC_BURCM	2, ., 6, ., 1, ., 5, 2	0.5248	0.8325	0.9944	yes	no
B1YV30	SERC_BURA4	2, ., 6, ., 1, ., 5, 2	0.5248	0.8325	0.9944	yes	no
Q885T5	SERC_PSESM	2, ., 6, ., 1, ., 5, 2	0.5373	0.8325	0.9916	yes	no
Q7MLH6	SERC_VIBVY	2, ., 6, ., 1, ., 5, 2	0.5274	0.8302	0.9807	yes	no
B4EB45	SERC_BURCJ	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9944	yes	no
A7FJX0	SERC_YERP3	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9916	yes	no
Q99K85	SERC_MOUSE	2, ., 6, ., 1, ., 5, 2	0.5191	0.8302	0.9648	yes	no
A6V2Q8	SERC_PSEA7	2, ., 6, ., 1, ., 5, 2	0.5276	0.8302	0.9889	yes	no
Q02PX3	SERC_PSEAB	2, ., 6, ., 1, ., 5, 2	0.5290	0.8325	0.9916	yes	no
C1DRQ9	SERC_AZOVD	2, ., 6, ., 1, ., 5, 2	0.5207	0.8325	0.9916	yes	no
A9R7I1	SERC_YERPG	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9916	yes	no
A4TN19	SERC_YERPP	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9916	yes	no
B2KA22	SERC_YERPB	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9916	yes	no
B7J6V1	SERC_ACIF2	2, ., 6, ., 1, ., 5, 2	0.5305	0.8325	0.9889	yes	no
Q4ZQ94	SERC_PSEU2	2, ., 6, ., 1, ., 5, 2	0.5290	0.8325	0.9916	yes	no
Q88M07	SERC_PSEPK	2, ., 6, ., 1, ., 5, 2	0.5152	0.8325	0.9916	yes	no
A6VZ92	SERC_MARMS	2, ., 6, ., 1, ., 5, 2	0.5083	0.8279	0.9916	yes	no
Q734W9	SERC_BACC1	2, ., 6, ., 1, ., 5, 2	0.5152	0.8325	0.9944	yes	no
Q1CA74	SERC_YERPA	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9916	yes	no
Q8D900	SERC_VIBVU	2, ., 6, ., 1, ., 5, 2	0.5274	0.8302	0.9807	yes	no
Q5P7U7	SERC_AROAE	2, ., 6, ., 1, ., 5, 2	0.5273	0.8348	0.9808	yes	no
A1VR16	SERC_POLNA	2, ., 6, ., 1, ., 5, 2	0.5135	0.8348	0.9755	yes	no
B5EPR5	SERC_ACIF5	2, ., 6, ., 1, ., 5, 2	0.5305	0.8325	0.9889	yes	no
B2FKF0	SERC_STRMK	2, ., 6, ., 1, ., 5, 2	0.5166	0.8325	0.9916	yes	no
Q638W1	SERC_BACCZ	2, ., 6, ., 1, ., 5, 2	0.5096	0.8325	0.9944	yes	no
Q3SK88	SERC_THIDA	2, ., 6, ., 1, ., 5, 2	0.5320	0.8279	0.9916	yes	no
A4XTE7	SERC_PSEMY	2, ., 6, ., 1, ., 5, 2	0.5152	0.8325	0.9916	yes	no
Q2SCF2	SERC_HAHCH	2, ., 6, ., 1, ., 5, 2	0.5138	0.8348	0.9944	yes	no
A6T1G7	SERC_JANMA	2, ., 6, ., 1, ., 5, 2	0.5054	0.8325	0.9862	yes	no
B1JRE0	SERC_YERPY	2, ., 6, ., 1, ., 5, 2	0.5193	0.8325	0.9916	yes	no
P52877	SERC_SPIOL	2, ., 6, ., 1, ., 5, 2	0.7129	0.9906	0.9906	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.6.1.52	0.979
3rd Layer	2.6.1	0.983

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT2G17630	phosphoserine aminotransferase, putative; phosphoserine aminotransferase, putative; FUNCTIONS IN- pyridoxal phosphate binding, transaminase activity, catalytic activity, O-phospho-L-serine-2-oxoglutarate aminotransferase activity; INVOLVED IN- response to cadmium ion; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Pyridoxal phosphate-dependent transferase, major region (InterPro-IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro-IPR000192), Phosphoserine aminotransferase (InterPro-IPR003248), [...] (422 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	PGDH	PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE); phosphoglycerate dehydrogenase; encodes a 3-Phosphogly [...] (624 aa)	•			•		•	•		0.995
	PSP	PSP (3-PHOSPHOSERINE PHOSPHATASE); phosphoserine phosphatase; 3-phosphoserine phosphatase actin [...] (295 aa)	•			•		•	•		0.995
	EDA9	EDA9 (embryo sac development arrest 9); ATP binding; embryo sac development arrest 9 (EDA9); FU [...] (603 aa)	•			•		•	•		0.975
	AT3G19480	D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative; D-3-phosphoglycerate dehydroge [...] (588 aa)	•			•		•	•		0.969
	MTO2	MTO2 (METHIONINE OVER-ACCUMULATOR 2); threonine synthase; threonine synthase (526 aa)						•	•		0.920
	PSAT	PSAT; O-phospho-L-serine-2-oxoglutarate aminotransferase; Encodes a phosphoserine aminotransfer [...] (430 aa)			•	•		•	•	•	0.910
	AT1G72810	threonine synthase, putative; threonine synthase, putative; FUNCTIONS IN- pyridoxal phosphate b [...] (516 aa)						•	•		0.901
	RACK1B_AT	RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide binding; Encodes a protein with sim [...] (326 aa)				•					0.692
	AT3G10690	DNA gyrase subunit A family protein; DNA gyrase subunit A family protein; FUNCTIONS IN- DNA top [...] (950 aa)	•			•			•		0.688
	PYRD	PYRD (pyrimidine d); dihydroorotate dehydrogenase; dihydroorotate dehydrogenase, catalyses four [...] (460 aa)	•			•			•		0.670

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	430
PLN02452	365	PLN02452, PLN02452, phosphoserine transaminase	0.0
PRK05355	360	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxy	0.0
cd00611	355	cd00611, PSAT_like, Phosphoserine aminotransferase	0.0
TIGR01364	349	TIGR01364, serC_1, phosphoserine aminotransferase	0.0
COG1932	365	COG1932, SerC, Phosphoserine aminotransferase [Coe	1e-176
PRK12462	364	PRK12462, PRK12462, phosphoserine aminotransferase	1e-133
pfam00266	370	pfam00266, Aminotran_5, Aminotransferase class-V	5e-51
COG0075	383	COG0075, COG0075, Serine-pyruvate aminotransferase	1e-16
cd06451	356	cd06451, AGAT_like, Alanine-glyoxylate aminotransf	4e-15
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	9e-09
TIGR01366	361	TIGR01366, serC_3, phosphoserine aminotransferase,	1e-08
PRK03080	378	PRK03080, PRK03080, phosphoserine aminotransferase	3e-07
TIGR03301	355	TIGR03301, PhnW-AepZ, 2-aminoethylphosphonate amin	5e-06
PLN02409	401	PLN02409, PLN02409, serine--glyoxylate aminotransa	2e-05
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	3e-05

>gnl|CDD|178071 PLN02452, PLN02452, phosphoserine transaminase

 Score =  695 bits (1796), Expect = 0.0
 Identities = 278/365 (76%), Positives = 307/365 (84%), Gaps = 2/365 (0%)

Query: 66  GQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLR 125
           G + RVFNF+AGPA LP  VL KAQ+ELYNW GSGMSVMEMSHRGKEF SII+KAE+DLR
Sbjct: 3   GSQGRVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLR 62

Query: 126 ALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQV 185
            LL+IP  Y VLFLQGGA+TQFAA+PLNLC P D  D++VTGSW  KA KEA+K+C   V
Sbjct: 63  ELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNV 122

Query: 186 IWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSN 245
           I SGK EKYTKIP+    E  PDAK++HICANETIHGVEFK+YP   N    LVADMSSN
Sbjct: 123 IASGKDEKYTKIPSVSEWELTPDAKFVHICANETIHGVEFKDYPDVGN--VPLVADMSSN 180

Query: 246 FCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLY 305
           F SKPVDV+++GVIYAGAQKNVGPSGVTIVI+RKDL+GNA+  TP MLDYKIH EN+SLY
Sbjct: 181 FLSKPVDVSKYGVIYAGAQKNVGPSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLY 240

Query: 306 NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF 365
           NTPPC+ IYMCGLVFE LL  GGL  +EK N +KA+LLY+ ID SNGFY CPVEKSVRS 
Sbjct: 241 NTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSL 300

Query: 366 MNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 425
           MNVPFTL  S+LEAEFVKEAAK  MVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF
Sbjct: 301 MNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 360

Query: 426 QAKHA 430
           QAKHA
Sbjct: 361 QAKHA 365

Length = 365

>gnl|CDD|235428 PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

 Score =  649 bits (1676), Expect = 0.0
 Identities = 207/361 (57%), Positives = 264/361 (73%), Gaps = 3/361 (0%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           RV+NF+AGPA LPE+VL +AQ EL +W GSGMSVME+SHR KEF+++ E+AE+DLR LLN
Sbjct: 3   RVYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLN 62

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP  Y VLFLQGGA+ QFA VP+NL       DY+ TGSW  KA KEA+K+    V  S 
Sbjct: 63  IPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEVNVAASS 122

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK 249
           + + +T IP  D  + + DA Y+H  +NETI G EF E P   +    LVADMSS+  S+
Sbjct: 123 EDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDTGDV--PLVADMSSDILSR 180

Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
           P+DV++FG+IYAGAQKN+GP+G+TIVIVR+DLLG A    P MLDYK H +N+S+YNTPP
Sbjct: 181 PIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPP 240

Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            + IY+ GLVF++L E GG+  +EK N++KA LLY+ ID S+ FY+ PV    RS MNVP
Sbjct: 241 TFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD-FYRNPVAPEDRSRMNVP 299

Query: 370 FTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429
           FTL   +L+ +F+ EA    +V LKGHRSVGGMRASIYNAMPL GV+ LV FMK+F+ +H
Sbjct: 300 FTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERRH 359

Query: 430 A 430
            
Sbjct: 360 G 360

Length = 360

>gnl|CDD|99736 cd00611, PSAT_like, Phosphoserine aminotransferase (PSAT) family

 Score =  615 bits (1589), Expect = 0.0
 Identities = 222/356 (62%), Positives = 270/356 (75%), Gaps = 3/356 (0%)

Query: 72  FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP 131
            NF+AGPA LPE+VL +AQ EL ++ G GMSVMEMSHR K+F++I+ +AESDLR LLNIP
Sbjct: 1   INFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIP 60

Query: 132 QEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKA 191
             Y VLFLQGGAT QFAAVPLNL       DY+VTG+W  KA KEA+++    VI + K 
Sbjct: 61  DNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKE 120

Query: 192 E-KYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKP 250
           E KYTKIP+ +  +  PDA Y+H C+NETIHGVEF E P        LVADMSSN  S+P
Sbjct: 121 EGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDEVPDTGG--VPLVADMSSNILSRP 178

Query: 251 VDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPC 310
           +DV++FGVIYAGAQKN+GP+GVT+VIVRKDLLG A+  TP ML+YK H +NNSLYNTPP 
Sbjct: 179 IDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPT 238

Query: 311 YCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370
           + IYM GLV ++L E GG+  +EK NR+KA+LLY+ ID SNGFY+ PV+K  RS MNVPF
Sbjct: 239 FAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPF 298

Query: 371 TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426
            L K +LE EF+KEA    M+ LKGHRSVGG+RASIYNA+ L GV+ L  FMK+FQ
Sbjct: 299 RLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEFQ 354

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine. Length = 355

>gnl|CDD|130431 TIGR01364, serC_1, phosphoserine aminotransferase

 Score =  606 bits (1564), Expect = 0.0
 Identities = 221/351 (62%), Positives = 267/351 (76%), Gaps = 2/351 (0%)

Query: 79  ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLF 138
           A LPE+VL +AQ EL N+ G+GMSVME+SHR KEF+++  +AESDLR LLNIP  Y VLF
Sbjct: 1   AALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLF 60

Query: 139 LQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIP 198
           LQGGAT QFAAVPLNL       DYIVTG+W  KA KEA+K+    V+ SGK   YTKIP
Sbjct: 61  LQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGVVNVVASGKEGNYTKIP 120

Query: 199 NFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGV 258
           +    E + DA Y+H CANETIHGVEF+E P  KN    LVADMSSN  S+P+DV++FG+
Sbjct: 121 DPSTWEISEDAAYVHYCANETIHGVEFRELPDVKN--APLVADMSSNILSRPIDVSKFGL 178

Query: 259 IYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGL 318
           IYAGAQKN+GP+G+T+VIVRKDLLG A   TP ML+YKIH EN+S+YNTPP + IY+ GL
Sbjct: 179 IYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGL 238

Query: 319 VFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLE 378
           VF++L E GG+  +EK N+ KA+LLY+ ID SNGFY+ PV+   RS MNV FTL   +LE
Sbjct: 239 VFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELE 298

Query: 379 AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429
             F+KEA +  +V LKGHRSVGGMRASIYNAMPL GV+ LV FMK+FQ KH
Sbjct: 299 KRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKKH 349

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266) [Amino acid biosynthesis, Serine family]. Length = 349

>gnl|CDD|224843 COG1932, SerC, Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

 Score =  496 bits (1278), Expect = e-176
 Identities = 188/364 (51%), Positives = 244/364 (67%), Gaps = 6/364 (1%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           RV+NF+AGPA LP +VL +AQ EL +W G GMSVME+SHR KEFK+++E+AE DLR LLN
Sbjct: 5   RVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLN 64

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP +Y VLFLQGGAT QFA  P+NL       DY+ TG+W + A KEA+K      +   
Sbjct: 65  IPDDYKVLFLQGGATGQFAMAPMNL-LGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDA 123

Query: 190 KAEK--YTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFC 247
           + E+  Y  IP+    + + +  Y+H C NETI GVE  E P    S G+LVAD SS   
Sbjct: 124 RIEEAGYGSIPDLSKWDFSDNDAYVHFCWNETISGVEVPELPD-IGSDGLLVADASSAIL 182

Query: 248 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNA-QDKTPLMLDYKIHDENNSLYN 306
           S+P+DV+++ VIYAGAQKN+GP+G+T+VIVR DLL  A     P + DY  H +N S+YN
Sbjct: 183 SRPIDVSKYDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYN 242

Query: 307 TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM 366
           TPP +  Y+ GLVF++L   GGL  +E  N+ KA+LLY+ ID S  FY+  V K+ RS M
Sbjct: 243 TPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRM 301

Query: 367 NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426
           NV FTL  ++L+  FV EA    ++ LKGHRSVGG+RASIYNA+PL  VE L  FM  F+
Sbjct: 302 NVTFTLVDAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFE 361

Query: 427 AKHA 430
             + 
Sbjct: 362 ETYK 365

Length = 365

>gnl|CDD|183540 PRK12462, PRK12462, phosphoserine aminotransferase; Provisional

 Score =  388 bits (998), Expect = e-133
 Identities = 147/360 (40%), Positives = 222/360 (61%), Gaps = 4/360 (1%)

Query: 73  NFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQ 132
           NF+ GP  LP+ VL + +  +     +G+SV+ MSHR   F S++ +AE+DLR LL IP 
Sbjct: 7   NFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPD 66

Query: 133 EYSVLFLQGGATTQFAAVPLNLCTP-NDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKA 191
           EY V+FLQGG++ QF+ +P+N   P     +Y+ TG W  KA  EA +    +V+W G A
Sbjct: 67  EYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAA 126

Query: 192 EKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPV 251
             Y  +P+   L+ +  A + H  +NET+ G++F +     +S   L+ADMSS+F S+P 
Sbjct: 127 SGYRTLPSLAELDWDARAPFRHYVSNETVEGLQFPDAAGLPDSP--LIADMSSDFMSRPF 184

Query: 252 DVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCY 311
           DV  +G++YA AQKN+GP+GVT+ I+R+ LL    D  P MLD++ H E+ S YNTPP +
Sbjct: 185 DVEAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVF 244

Query: 312 CIYMCGLVFEYLL-ELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF 370
            IY+  LV  ++  E+GG++ +  +N +KA +LY  +D  N    C   ++ RS MNV F
Sbjct: 245 AIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAF 304

Query: 371 TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430
              +  L+  F +++ +     L GHRS+GG+RAS+YNA+    V +L AF+KDF  +HA
Sbjct: 305 RFRQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIRHA 364

Length = 364

>gnl|CDD|215829 pfam00266, Aminotran_5, Aminotransferase class-V

 Score =  175 bits (447), Expect = 5e-51
 Identities = 87/385 (22%), Positives = 142/385 (36%), Gaps = 52/385 (13%)

Query: 71  VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI 130
           ++  +A     P+ VL   Q    ++ G+      + H GKE     E+A   +   +N 
Sbjct: 1   IYLDSAATTQKPQAVLDALQEYYTDYNGNVHR--GVHHLGKEATQAYEEAREKVAEFINA 58

Query: 131 PQEYSVLFLQGGATTQFAAVPLNLCT---PNDPVDYIVTGSWGDK-AFKEAQKFCNPQVI 186
           P +  ++F  G  T     V ++L     P D +         +   ++E  K     V 
Sbjct: 59  PSDEEIIFTSGT-TEAINLVAISLGRSLKPGDEILVTEMEHHANLVPWQELAKRTGATVR 117

Query: 187 WSGKAEKYTKIPNFDALEQ--NPDAKYLHICANETIHGV-----EFKEYPSAKNSTGILV 239
                     + + DALE+   P  K + I     + G      E  +   A     ++V
Sbjct: 118 VIPVDPN--GLLDLDALEKLLTPRTKLVAITHVSNVTGTVNPVEEIGKL--AHEYGALVV 173

Query: 240 ADMSSNFCSKPVDVTRFGV--IYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM----- 292
            D +     +P+DV   GV  +     K  GP+G+ ++  R+DLL       PL+     
Sbjct: 174 VDAAQAVGHRPIDVQALGVDFLAFSGHKLYGPTGIGVLYGRRDLLEKLP---PLLGGGGM 230

Query: 293 -----LDYKIHDENNSLYN--TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345
                L      +  S +   TP    I   G   +YL E+ GL  +EK  R+ A  LY 
Sbjct: 231 IDTVSLQETTFADAPSKFEAGTPNIAGIIGLGAALDYLAEI-GLEAIEKHERELAAYLYE 289

Query: 346 VIDGSNG--FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA----------AKEKMVQL 393
            +    G   Y  P E+   S ++  F        A  + E           A+  MV+L
Sbjct: 290 RLLAIPGIRLYGPPAERR-PSIISFNFPGVHPHDVATLLDERGIAVRSGHHCAQPLMVRL 348

Query: 394 KGHRSVGGMRASIYNAMPLAGVEKL 418
                 G +RAS+Y       V++L
Sbjct: 349 GLG---GTLRASLYFYNTEEEVDRL 370

This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 370

>gnl|CDD|223153 COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

 Score = 80.7 bits (200), Expect = 1e-16
 Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 35/285 (12%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP  +P +VLL             M+   + HR  +F  I+++    LR +      
Sbjct: 9   LTPGPVPVPPRVLL------------AMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENG 56

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-----WS 188
             V+ L G  T    A   +L  P D V  +V G +G++ F E  +    +V+     W 
Sbjct: 57  D-VVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER-FAEIAERYGAEVVVLEVEW- 113

Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSN 245
           G+A    ++   +AL+++PD K + +  NET  GV    KE   A    G L + D  S+
Sbjct: 114 GEAVDPEEVE--EALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSS 171

Query: 246 FCSKPVDVTRFGV--IYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTP--LMLDYKIH-- 298
              +P+ V  +G+     G+QK +G P G+  V V +  L   +++      LD K    
Sbjct: 172 LGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLK 231

Query: 299 --DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE 341
             ++  S   TPP   IY      + +LE  GL      +R+ AE
Sbjct: 232 YMEKKGSTPYTPPVNLIYALREALDLILEE-GLEARIARHRRLAE 275

Length = 383

>gnl|CDD|99744 cd06451, AGAT_like, Alanine-glyoxylate aminotransferase (AGAT) family

 Score = 75.8 bits (187), Expect = 4e-15
 Identities = 75/295 (25%), Positives = 121/295 (41%), Gaps = 41/295 (13%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP+N+P +VL KA           M+   + HR  EF +++++    LR +    + 
Sbjct: 3   LIPGPSNVPPRVL-KA-----------MNRPMLGHRSPEFLALMDEILEGLRYVF-QTEN 49

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-----WS 188
                L G  T    A   NL  P D V   V G +GD+ + +  +     V      W 
Sbjct: 50  GLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR-WADMAERYGADVDVVEKPW- 107

Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGV-----EFKEYPSAKNSTGILVADMS 243
           G+A    +I   +ALEQ+ D K + +  NET  GV            AK    +L+ D  
Sbjct: 108 GEAVSPEEIA--EALEQH-DIKAVTLTHNETSTGVLNPLEGIGA--LAKKHDALLIVDAV 162

Query: 244 SNFCSKPVDVTRFGV--IYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPL------MLD 294
           S+   +P  +  +GV   Y G+QK +G P G+  +   +  L   + KT        +L 
Sbjct: 163 SSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLL 222

Query: 295 YKIHDENNSLY-NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID 348
              +      Y +TPP   +Y      + +LE  GL      +R+ A+ L   ++
Sbjct: 223 LLKYWGEGYSYPHTPPVNLLYALREALDLILE-EGLENRWARHRRLAKALREGLE 276

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway. Length = 356

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 54.3 bits (131), Expect = 9e-09
 Identities = 36/174 (20%), Positives = 54/174 (31%), Gaps = 17/174 (9%)

Query: 117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKE 176
           +E+ E  L  LL  P     +F     T    A  L L  P D V     G         
Sbjct: 2   LEELEEKLARLLQ-PGNDKAVF-VPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAA 59

Query: 177 AQKFCNPQVIWSGKAEKY-TKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNST 235
                 P  +    A      +   + L+  P+   + I  N T  GV     P  +   
Sbjct: 60  ELAGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVL---VPLKEIRK 116

Query: 236 ------GILVADMS-----SNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVR 278
                  +L+ D +     S      +      V+     KN+G  G  +VIV+
Sbjct: 117 IAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKNLGGEGGGVVIVK 170

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|130433 TIGR01366, serC_3, phosphoserine aminotransferase, putative

 Score = 56.5 bits (136), Expect = 1e-08
 Identities = 65/283 (22%), Positives = 105/283 (37%), Gaps = 25/283 (8%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
           F +GP+    KV L+    L     +  S+   SHR    K+++ +    L  L ++P  
Sbjct: 7   FGSGPS----KVRLEQLQALTT---TAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDG 59

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEK 193
           Y V+   GGAT  + A    L        ++  G +  K  K  +    P   W G+   
Sbjct: 60  YEVILGNGGATAFWDAATFGLI--EKKSLHLSFGEFSSKFAKAVKL--AP---WLGEPII 112

Query: 194 YTKIP-NFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVD 252
            T  P +    + +P    +    NET  GV         +   ++V D +S     PVD
Sbjct: 113 VTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRPEGSDDALVVIDATSGAGGLPVD 172

Query: 253 VTRFGVIYAGAQKNVGPS-GVTIVIVRKDLLG-----NAQDK-TPLMLDYKIHDEN---N 302
           +    V Y   QKN     G+ + I+    L       A  +  P  L      +N   N
Sbjct: 173 IAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKN 232

Query: 303 SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345
             YNTP    + +     +++   GGL+         +  LY+
Sbjct: 233 QTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYS 275

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria [Amino acid biosynthesis, Serine family]. Length = 361

>gnl|CDD|235103 PRK03080, PRK03080, phosphoserine aminotransferase; Provisional

 Score = 51.7 bits (125), Expect = 3e-07
 Identities = 65/305 (21%), Positives = 121/305 (39%), Gaps = 32/305 (10%)

Query: 102 SVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPV 161
           +++  SHR K  K+++++     R LL++P+ Y V  + G  T  +     +L      V
Sbjct: 35  ALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGA-RRV 93

Query: 162 DYIVTGSWGDK---AFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANE 218
           D++   S+G K      +  K  +P+V+   +A+ Y  +P+  A++ + D  +     N 
Sbjct: 94  DHLAWESFGSKWATDVVKQLKLEDPRVL---EAD-YGSLPDLSAVDFDRDVVFTW---NG 146

Query: 219 TIHGVEFK-EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVI 276
           T  GV          +  G+ + D +S   + P+D ++  V     QK +G   G  + I
Sbjct: 147 TTTGVRVPVARWIGADREGLTICDATSAAFALPLDWSKLDVYTFSWQKVLGGEGGHGMAI 206

Query: 277 VRKDLLGNAQDKTP---------LMLDYKIHDEN---NSLYNTPPCYCIYMCGLVFEYLL 324
           +    +   +  TP         L    K   EN       NTP    +       ++  
Sbjct: 207 LSPRAVERLESYTPARPIPKFFRLTKGGKA-IENSFKGQTINTPSMLTVEDYLDQLDWAN 265

Query: 325 ELGGLNEVEKMNRKKAELLYNVIDGSN--GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFV 382
            +GGL+ +       A +LY+  + +          + + RS  N   TL+  D +A   
Sbjct: 266 SIGGLDALIARTAANASVLYDWAEKTPWATPL--VADPATRS--NTSVTLDFVDAQAAVD 321

Query: 383 KEAAK 387
             A  
Sbjct: 322 AAAVA 326

Length = 378

>gnl|CDD|213793 TIGR03301, PhnW-AepZ, 2-aminoethylphosphonate aminotransferase

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 26/246 (10%)

Query: 103 VMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVD 162
           +++  H   EF  + ++    L AL      ++ + LQG  T    A   +L   +  + 
Sbjct: 19  LVDWCHWDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLL 78

Query: 163 YIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKY--TKIPNFDALEQ----NPDAKYLHICA 216
            ++ G++G++  K  +    P          +   + P+ + +E+    +PD  ++    
Sbjct: 79  VLINGAYGERLAKICEYLGIPHT-----DLNFSEYEPPDLNRIEEALAADPDITHVATVH 133

Query: 217 NETIHGV--EFKEYPSAKNSTGI-LVADMSSNFCSKPVDVTRFGVIY--AGAQKNV-GPS 270
           +ET  G+    +       S G  L+ D  S+F + P+D+    V    A A K + G  
Sbjct: 134 HETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVP 193

Query: 271 GVTIVIVRKDLLGNAQD-KTPLMLDYKIHDE------NNSLYNTPPCYCIYMCGLVFEYL 323
           G   VI R+DLL  +      L LD  ++D+            TPP + +Y      E L
Sbjct: 194 GFGFVIARRDLLEASAGNARSLYLD--LYDQWAYMEKTGKWRFTPPTHTVYAFAQALEEL 251

Query: 324 LELGGL 329
              GG+
Sbjct: 252 EAEGGV 257

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level TIGR02326. The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different. Length = 355

>gnl|CDD|178031 PLN02409, PLN02409, serine--glyoxylate aminotransaminase

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 44/220 (20%), Positives = 78/220 (35%), Gaps = 38/220 (17%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
           F  GP N+PE+VL              M+     HR   F ++ ++   D++ +      
Sbjct: 13  FVPGPVNIPERVL------------RAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSG 60

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
              +F     T  + +   N  +P D V     G +      + Q+   +  V+   W  
Sbjct: 61  TPFIF-PTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQ 119

Query: 190 KAEKYTKIPNFDALEQNPDAKYLH------ICANETIHGVE-----FKEYPSAKNSTGIL 238
            A       + D L+        H      +  NET  GV       ++         +L
Sbjct: 120 GA-------DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALL 172

Query: 239 VADMSSNFCSKPVDVTRFGV--IYAGAQKNV-GPSGVTIV 275
           + D  S+  +    +  +GV     G+QK +  P+G+ IV
Sbjct: 173 LVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIV 212

Length = 401

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 45.8 bits (109), Expect = 3e-05
 Identities = 88/415 (21%), Positives = 138/415 (33%), Gaps = 93/415 (22%)

Query: 72  FNFAAGPANLPEKVLLKAQSELYNW------RGSGMSVMEMSHRGKEFKSIIEKAESDLR 125
            + AA     P+ VL  A +E Y        RG+     E +        + E A   + 
Sbjct: 26  LDNAATSQ-KPQAVL-DAVAEYYRRYNANVHRGAHTLAEEATD-------LYEAAREAVA 76

Query: 126 ALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTG---------SWGDKAFKE 176
             LN      ++F +G  T     V   L     P D IV            W     +E
Sbjct: 77  RFLNADSSDEIVFTRG-TTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPW-----QE 130

Query: 177 AQKFCNPQVIWSGKAEKYTKIPNFDALEQ--NPDAKYLHICANETIHGVEF--------- 225
             K    +V      +      + DALE+   P  K + +     + G            
Sbjct: 131 LAKRTGAKVRVIPLDDDGL--LDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELA 188

Query: 226 KEYPSAKNSTGILVA-DMSSNFCSKPVDVTRFGV--IYAGAQKNV-GPSGVTIVIVRKDL 281
            E+       G LV  D +      P+DV   G   +     K + GP+G+ ++ VRK+L
Sbjct: 189 HEH-------GALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKEL 241

Query: 282 LGNAQDKTPL-----MLDYKIHDENNSLYNTP-------PCYC-IYMCGLVFEYLLELGG 328
           L   +   P      M++Y   DE  +L   P       P            +YLLE+ G
Sbjct: 242 LEELE---PFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEI-G 297

Query: 329 LNEVEKMNRKKAELLYNVIDGSNG--FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAA 386
           +  +E   R+  E L   +    G   Y  P            F ++   +    V    
Sbjct: 298 MEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVS---FNVKG--IHPHDVATLL 352

Query: 387 KEKMVQLK-GHRSVGGM----------RAS--IYNAMPLAGVEKLVAFMKDFQAK 428
            EK + ++ GH     +          RAS  +YN      V++L+  +K   A 
Sbjct: 353 DEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTE--EDVDRLLEALKKALAL 405

Length = 405

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	430
PRK12462	364	phosphoserine aminotransferase; Provisional	100.0
PLN02452	365	phosphoserine transaminase	100.0
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	100.0
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	100.0
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	100.0
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	100.0
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	100.0
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	100.0
PRK03080	378	phosphoserine aminotransferase; Provisional	100.0
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	100.0
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	100.0
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	100.0
PLN02409	401	serine--glyoxylate aminotransaminase	100.0
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	100.0
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	100.0
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	100.0
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	100.0
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	100.0
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	100.0
PRK10874	401	cysteine sulfinate desulfinase; Provisional	100.0
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	100.0
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	100.0
PLN02651	364	cysteine desulfurase	100.0
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	100.0
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	100.0
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	100.0
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	100.0
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	100.0
PRK02948	381	cysteine desulfurase; Provisional	100.0
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	100.0
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	100.0
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	100.0
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	100.0
TIGR01814	406	kynureninase kynureninase. This model describes ky	100.0
PLN02724	805	Molybdenum cofactor sulfurase	100.0
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	100.0
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	100.0
PRK14012	404	cysteine desulfurase; Provisional	100.0
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.97
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.96
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.96
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.96
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.95
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.95
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.95
PRK02769	380	histidine decarboxylase; Provisional	99.95
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.94
PRK09105	370	putative aminotransferase; Provisional	99.94
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.94
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.94
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.94
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.94
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.93
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.93
PRK06108	382	aspartate aminotransferase; Provisional	99.93
PRK07179	407	hypothetical protein; Provisional	99.93
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.93
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.92
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.92
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.92
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	99.92
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.92
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.92
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.92
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.92
PLN03032	374	serine decarboxylase; Provisional	99.92
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.92
PRK06225	380	aspartate aminotransferase; Provisional	99.92
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.92
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.92
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.92
PRK06207	405	aspartate aminotransferase; Provisional	99.91
PRK07324	373	transaminase; Validated	99.91
PRK07908	349	hypothetical protein; Provisional	99.91
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.91
PLN00175	413	aminotransferase family protein; Provisional	99.91
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.91
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.91
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.91
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.9
PRK13392	410	5-aminolevulinate synthase; Provisional	99.9
PRK05764	393	aspartate aminotransferase; Provisional	99.9
PRK05957	389	aspartate aminotransferase; Provisional	99.9
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.9
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.9
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.9
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.9
PRK08361	391	aspartate aminotransferase; Provisional	99.9
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.9
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.9
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.9
PRK07681	399	aspartate aminotransferase; Provisional	99.9
PLN02483	489	serine palmitoyltransferase	99.9
PRK07682	378	hypothetical protein; Validated	99.89
PRK08960	387	hypothetical protein; Provisional	99.89
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.89
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.89
PRK12414	384	putative aminotransferase; Provisional	99.89
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.89
PRK06290	410	aspartate aminotransferase; Provisional	99.89
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.89
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.89
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.89
PTZ00433	412	tyrosine aminotransferase; Provisional	99.89
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.89
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.89
PRK08912	387	hypothetical protein; Provisional	99.89
PRK05942	394	aspartate aminotransferase; Provisional	99.89
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.89
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.89
PLN02187	462	rooty/superroot1	99.89
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.89
PRK09064	407	5-aminolevulinate synthase; Validated	99.89
PRK03321	352	putative aminotransferase; Provisional	99.88
PRK08363	398	alanine aminotransferase; Validated	99.88
PRK09265	404	aminotransferase AlaT; Validated	99.88
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.88
PRK09082	386	methionine aminotransferase; Validated	99.88
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.88
PRK07777	387	aminotransferase; Validated	99.88
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.88
PLN02656	409	tyrosine transaminase	99.88
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.87
PLN02271	586	serine hydroxymethyltransferase	99.87
PLN02721	353	threonine aldolase	99.87
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.87
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.87
PTZ00377	481	alanine aminotransferase; Provisional	99.87
PRK07683	387	aminotransferase A; Validated	99.87
PRK07568	397	aspartate aminotransferase; Provisional	99.87
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.87
PLN02822	481	serine palmitoyltransferase	99.87
PRK07337	388	aminotransferase; Validated	99.87
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.87
PRK13393	406	5-aminolevulinate synthase; Provisional	99.87
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.87
PRK07550	386	hypothetical protein; Provisional	99.87
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.87
PRK06348	384	aspartate aminotransferase; Provisional	99.86
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.86
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.86
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.86
PRK08068	389	transaminase; Reviewed	99.86
PRK06107	402	aspartate aminotransferase; Provisional	99.86
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.86
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.86
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.86
PRK08636	403	aspartate aminotransferase; Provisional	99.86
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.85
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.85
PRK06836	394	aspartate aminotransferase; Provisional	99.85
PRK09148	405	aminotransferase; Validated	99.85
PLN02231	534	alanine transaminase	99.85
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.84
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.84
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.84
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	99.84
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.83
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.83
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.83
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	99.83
PRK06855	433	aminotransferase; Validated	99.83
PRK10534	333	L-threonine aldolase; Provisional	99.83
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.82
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.82
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.82
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.82
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.82
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.82
PRK05839	374	hypothetical protein; Provisional	99.82
PRK08175	395	aminotransferase; Validated	99.82
PRK05367	954	glycine dehydrogenase; Provisional	99.81
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.81
PLN02590	539	probable tyrosine decarboxylase	99.81
PLN02880	490	tyrosine decarboxylase	99.81
PLN02672	1082	methionine S-methyltransferase	99.81
PRK06767	386	methionine gamma-lyase; Provisional	99.81
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.8
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.8
PRK07582	366	cystathionine gamma-lyase; Validated	99.8
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.8
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.8
PLN02955	476	8-amino-7-oxononanoate synthase	99.8
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.8
PTZ00376	404	aspartate aminotransferase; Provisional	99.79
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.79
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.79
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.79
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.79
PRK08064	390	cystathionine beta-lyase; Provisional	99.79
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.78
PRK05968	389	hypothetical protein; Provisional	99.78
PRK07505	402	hypothetical protein; Provisional	99.78
PRK09275	527	aspartate aminotransferase; Provisional	99.78
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.78
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.78
PRK08045	386	cystathionine gamma-synthase; Provisional	99.77
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.77
PRK09028	394	cystathionine beta-lyase; Provisional	99.77
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.77
PRK08249	398	cystathionine gamma-synthase; Provisional	99.77
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.77
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.77
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.77
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.77
PRK04311	464	selenocysteine synthase; Provisional	99.77
PRK12566	954	glycine dehydrogenase; Provisional	99.77
PRK06234	400	methionine gamma-lyase; Provisional	99.76
PLN02242	418	methionine gamma-lyase	99.76
PRK05367	954	glycine dehydrogenase; Provisional	99.76
PRK08114	395	cystathionine beta-lyase; Provisional	99.76
PRK08861	388	cystathionine gamma-synthase; Provisional	99.76
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.76
PRK08354	311	putative aminotransferase; Provisional	99.76
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.76
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.76
PRK06460	376	hypothetical protein; Provisional	99.75
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.75
PRK08776	405	cystathionine gamma-synthase; Provisional	99.75
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.75
PLN02263	470	serine decarboxylase	99.75
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	99.75
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.74
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.74
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.74
PRK07503	403	methionine gamma-lyase; Provisional	99.74
PRK07811	388	cystathionine gamma-synthase; Provisional	99.73
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.73
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.73
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.73
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.73
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.72
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.72
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.72
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.71
PRK08574	385	cystathionine gamma-synthase; Provisional	99.71
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.71
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.71
PLN02509	464	cystathionine beta-lyase	99.71
PRK05939	397	hypothetical protein; Provisional	99.71
PLN02397	423	aspartate transaminase	99.69
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.69
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.69
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.69
PRK02627	396	acetylornithine aminotransferase; Provisional	99.69
PLN02368	407	alanine transaminase	99.69
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.69
PRK07049	427	methionine gamma-lyase; Validated	99.69
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.68
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.68
PRK07671	377	cystathionine beta-lyase; Provisional	99.68
PRK05967	395	cystathionine beta-lyase; Provisional	99.68
PRK07050	394	cystathionine beta-lyase; Provisional	99.68
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.68
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.67
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.67
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.67
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.66
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.66
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.66
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.65
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.65
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.64
PRK08637	388	hypothetical protein; Provisional	99.64
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.64
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.63
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.62
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.62
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.62
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.61
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.6
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.6
PRK04260	375	acetylornithine aminotransferase; Provisional	99.59
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	99.56
PLN02624	474	ornithine-delta-aminotransferase	99.56
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.55
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.54
PRK15029	755	arginine decarboxylase; Provisional	99.53
PRK06434	384	cystathionine gamma-lyase; Validated	99.53
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.53
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.51
PRK13578	720	ornithine decarboxylase; Provisional	99.47
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.47
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.47
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.46
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.45
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.44
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.44
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.43
PRK15400	714	lysine decarboxylase CadA; Provisional	99.42
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.39
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.38
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.38
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.37
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.37
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.36
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.36
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.34
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.34
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.33
PLN00144	382	acetylornithine transaminase	99.33
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.32
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.31
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.31
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.31
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.3
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.28
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.27
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.27
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.26
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.26
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.26
PRK06541	460	hypothetical protein; Provisional	99.24
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.23
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.23
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.22
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.19
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.19
PRK13237	460	tyrosine phenol-lyase; Provisional	99.18
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	99.17
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.17
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.17
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.17
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.13
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.13
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.11
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.11
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.1
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.1
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.1
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.07
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.07
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.06
PRK05965	459	hypothetical protein; Provisional	99.06
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.06
PRK07678	451	aminotransferase; Validated	99.05
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.05
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.05
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.03
PRK07482	461	hypothetical protein; Provisional	99.03
PRK07046	453	aminotransferase; Validated	99.02
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	98.99
PRK06105	460	aminotransferase; Provisional	98.99
PRK12403	460	putative aminotransferase; Provisional	98.97
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	98.96
PRK06062	451	hypothetical protein; Provisional	98.96
PRK08297	443	L-lysine aminotransferase; Provisional	98.95
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	98.95
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.94
PRK07483	443	hypothetical protein; Provisional	98.93
PRK06917	447	hypothetical protein; Provisional	98.93
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	98.91
PRK06149	972	hypothetical protein; Provisional	98.91
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	98.9
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	98.9
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	98.89
PRK07036	466	hypothetical protein; Provisional	98.87
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	98.86
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	98.85
PRK07480	456	putative aminotransferase; Validated	98.84
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	98.84
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.83
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	98.82
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.8
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	98.8
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	98.79
PRK06148	1013	hypothetical protein; Provisional	98.79
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	98.78
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	98.78
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.77
PRK07481	449	hypothetical protein; Provisional	98.77
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	98.76
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	98.75
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.69
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	98.63
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	98.61
COG4100	416	Cystathionine beta-lyase family protein involved i	98.52
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	98.45
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	98.45
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	98.4
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.26
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.2
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	98.19
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	97.99
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	97.94
PRK12566	954	glycine dehydrogenase; Provisional	97.88
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.82
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	97.47
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	96.82
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	96.49
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	96.14
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	96.07
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	95.61
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	93.86
KOG2142	728	consensus Molybdenum cofactor sulfurase [Coenzyme	93.82

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=100.00  E-value=4.2e-63  Score=485.26  Aligned_cols=360  Identities=40%  Similarity=0.770  Sum_probs=332.5

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      .+.|||+|||+.+|++|++++++.+.+|+++|+|+++++||+++|.++++++++.|++++++|++|+|+|++||||.+|+
T Consensus         3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~e   82 (364)
T PRK12462          3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFS   82 (364)
T ss_pred             cccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHH
Confidence            35899999999999999999999999999999999999999999999999999999999999988999999999999999


Q ss_pred             HHHhhcCCCCCcEE-EEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCCC
Q 043610          149 AVPLNLCTPNDPVD-YIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKE  227 (430)
Q Consensus       149 ~~~~sl~~~gd~vl-~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~pe  227 (430)
                      +++.|++++||+++ ++.+|.||.+|.++++++|++.+++..++.+++.++++++++++++.++|++||+||+||+.+|+
T Consensus        83 a~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~~~~~d~~~v~~t~NETstGv~~~~  162 (364)
T PRK12462         83 MIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAELDWDARAPFRHYVSNETVEGLQFPD  162 (364)
T ss_pred             HHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHhccCCCCcEEEEccCCCCceEecCc
Confidence            99999999999776 89999999999999999997776664333357778888888777889999999999999999985


Q ss_pred             CccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCC
Q 043610          228 YPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT  307 (430)
Q Consensus       228 i~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T  307 (430)
                      +...  +++++++|+++++|+.|+|+++||++++++||++||+|++++++|++++++..+..|.|+||....+++++++|
T Consensus       163 ~~~~--~~~llvvD~sS~~~s~pid~~~~dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nT  240 (364)
T PRK12462        163 AAGL--PDSPLIADMSSDFMSRPFDVEAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNT  240 (364)
T ss_pred             cccc--CCCeEEEEcCchhhCCCCChHHccEEEeeccccCCCCceEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCC
Confidence            5443  57899999999999999999999999999999999999999999999999877667899999888888889999


Q ss_pred             ccHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHH
Q 043610          308 PPCYCIYMCGLVFEYLLEL-GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAA  386 (430)
Q Consensus       308 ~~~~~~~a~~~al~~l~~~-~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~  386 (430)
                      ||++.+|++.++|++++++ +|++++.+|++++++.+|++|++..|+...+++++.||.++++|.+++..++.+|++.++
T Consensus       241 Ppv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a~  320 (364)
T PRK12462        241 PPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPRLDTLFKEQST  320 (364)
T ss_pred             chHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHHHHHHHHHHHH
Confidence            9999999999999999877 699999999999999999999987678888788999999999999987666778999999


Q ss_pred             HcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          387 KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       387 ~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      ++|+..+.|||+.|++|+|+++.++.|+|++|+++|++|.++|+
T Consensus       321 ~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~~~  364 (364)
T PRK12462        321 EAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIRHA  364 (364)
T ss_pred             HCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999874

>PLN02452 phosphoserine transaminase

Probab=100.00  E-value=8.8e-61  Score=473.65  Aligned_cols=364  Identities=76%  Similarity=1.197  Sum_probs=323.4

Q ss_pred             cCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           65 SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        65 ~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      +....++|||+|||+.+|++|++++++.+.+|+++|+|+++++||+++|.++++++++.|++++++|++|+|++++||||
T Consensus         2 ~~~~~~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt   81 (365)
T PLN02452          2 QGSQGRVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAS   81 (365)
T ss_pred             CCCCCceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccH
Confidence            34456789999999999999999999999999999999999999999999999999999999999988899999999999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCcccc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~  224 (430)
                      .++++++.|++.+||+++++.+|.||.+|.++++++|.+.++...+..++...+++++++.+++.+.|++||+||+||+.
T Consensus        82 ~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~hnETstGv~  161 (365)
T PLN02452         82 TQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWELTPDAKFVHICANETIHGVE  161 (365)
T ss_pred             HHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCCCCCCcEEEECCCCCCCcEe
Confidence            99999999999999999999999999999999999995444443222234457777777767789999999999999997


Q ss_pred             CCCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCC
Q 043610          225 FKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSL  304 (430)
Q Consensus       225 ~pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~  304 (430)
                      +..+.++.  +++++||++|++|+.|+|++++|+.++|+||++||+|+|++++|+++++++.+..|.+++|....+++++
T Consensus       162 ~~~~~~i~--~~~lvVDa~Ss~g~~pidv~~~~v~~~saqK~lGP~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~  239 (365)
T PLN02452        162 FKDYPDVG--NVPLVADMSSNFLSKPVDVSKYGVIYAGAQKNVGPSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSL  239 (365)
T ss_pred             cCcccccC--CCeEEEECCccccCcccCHHHcCEEEEecccccCCCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCc
Confidence            44333332  3799999999999999999999998899999999999999999999999877767888998877777888


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHH
Q 043610          305 YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKE  384 (430)
Q Consensus       305 ~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~  384 (430)
                      ++|||+..++++.++|+++.+++|++++.+|+++++++++++|++..|+...+.+++.||.++++|.+++...+.+|.+.
T Consensus       240 ~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~  319 (365)
T PLN02452        240 YNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSELEAEFVKE  319 (365)
T ss_pred             cCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCchhHHHHHHH
Confidence            99999999999999999998767999999999999999999999867884433455568889999999875555589999


Q ss_pred             HHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          385 AAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       385 L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      ++++|++.++||++.|++|+|+++.++.++|++|+++|+++.++|+
T Consensus       320 ~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~~~~  365 (365)
T PLN02452        320 AAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  365 (365)
T ss_pred             HHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999874

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=7.1e-59  Score=421.53  Aligned_cols=367  Identities=65%  Similarity=1.016  Sum_probs=342.7

Q ss_pred             ccCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           64 QSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      |...+.++.||++||..+|.+|+..+++++.+|++.|.|+++++||+++|..++++++..+++++++|+.|+|+|+||||
T Consensus         1 m~~a~~~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGG   80 (370)
T KOG2790|consen    1 MMDAPERVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGG   80 (370)
T ss_pred             CCCCccceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCC
Confidence            34557889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCC
Q 043610          144 TTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETI  220 (430)
Q Consensus       144 T~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~  220 (430)
                      |.++.++..+++  +-|+.+.++.+|.|+.+.+++|+++| -..+++..++-.+|.+||.+.|+++|+.++|.+|.+||.
T Consensus        81 t~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~da~yvyyCaNETV  160 (370)
T KOG2790|consen   81 TGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNPDASYVYYCANETV  160 (370)
T ss_pred             cccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCCCccEEEEecCcee
Confidence            999999999996  56888889999999999999999999 445555544434678999998998999999999999999


Q ss_pred             ccccCCCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhh
Q 043610          221 HGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE  300 (430)
Q Consensus       221 tG~~~pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~  300 (430)
                      .|+.+|++.--..+|+.+|+|.++.|.+.|+|++++|+++++.||++||+|+.++++|++++....+.+|..+||+.+.+
T Consensus       161 HGVEf~~~P~~~~~~~vlVaDmSSnflSrpvDvsk~gvi~aGAQKN~G~aG~Tvvivr~dllg~~~~~tP~v~dyk~~~~  240 (370)
T KOG2790|consen  161 HGVEFDFIPVNDPKGAVLVADMSSNFLSRPVDVSKFGVIFAGAQKNVGPAGVTVVIVRKDLLGNALDITPSVLDYKIMDK  240 (370)
T ss_pred             eceecCCCCCCCCCCceEEEecccchhcCCccchhcceEEeccccccCccccEEEEEehhhhcccccCCccccceeeecc
Confidence            99999977733357899999999999999999999999999999999999999999999999998888999999999999


Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHH
Q 043610          301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAE  380 (430)
Q Consensus       301 ~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~  380 (430)
                      +++.++|||+++++.+...|+++++.+|++++.+.+.+.++.+|+.|.+..||..+++++..||-|+++|++.+.+++.+
T Consensus       241 NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~e  320 (370)
T KOG2790|consen  241 NNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAE  320 (370)
T ss_pred             ccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecchHHHHH
Confidence            99999999999999999999999999999999999999999999999998899999999999999999999998778889


Q ss_pred             HHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          381 FVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       381 ~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      |.++..+++++.+.|||+.|+||.|+++..+.+++++|+++|+++.++|+
T Consensus       321 FLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~h~  370 (370)
T KOG2790|consen  321 FLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQKKHA  370 (370)
T ss_pred             HHHHHHHhhhhccccccccccchhhhhccccHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999985

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=100.00  E-value=3.3e-56  Score=421.59  Aligned_cols=361  Identities=52%  Similarity=0.857  Sum_probs=326.6

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ..++++||++||+.+|+.|++.+++.+.+|++.|+|+++++||+++++++++++++.+++++++|++|+|+|++||+|.+
T Consensus         2 ~~~~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~q   81 (365)
T COG1932           2 SMPRVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQ   81 (365)
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHH
Confidence            35779999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCC-ceEEecC-CCCcCCCCCCccccccCCCccEEEEeecCCCcccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCN-PQVIWSG-KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~-~~~v~~~-~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~  224 (430)
                      +.+++.+++.++..- ++.+|+|+...+++++++++ +...... ...+++.+|+++.+.+.++..+|++|+++|.+|+.
T Consensus        82 f~~~p~nLl~~~~~~-yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~ayv~~~~NeTi~Gv~  160 (365)
T COG1932          82 FAMAPMNLLGKRGTD-YVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWDFSDNDAYVHFCWNETISGVE  160 (365)
T ss_pred             HHHHHHhhhcccCce-eEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcccCCCccEEEEecCCcccceE
Confidence            999999998543221 67789999888888999883 5544432 33357888988887766667789999999999999


Q ss_pred             CCCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCC-CCccccccchhhcCC
Q 043610          225 FKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDK-TPLMLDYKIHDENNS  303 (430)
Q Consensus       225 ~pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~-~p~~~~~~~~~~~~~  303 (430)
                      +++...+... .++++|+++.+++.++|++++|+++++.||.+||.|++++++|++++++..+. +|.+++|..+.++++
T Consensus       161 v~~~p~~~~~-~~~v~D~SS~ilsr~iDvsk~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s  239 (365)
T COG1932         161 VPELPDIGSD-GLLVADASSAILSRPIDVSKYDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLPSIFDYLTHADNGS  239 (365)
T ss_pred             ccCCCCCCCC-ceEEEecccHHhcCCCChhHcceEEEehhhccCccceEEEEEcHHHHhcccccCCchHhhchhhhccCC
Confidence            9966555322 89999999999999999999999999999999999999999999999998776 899999999999999


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHH
Q 043610          304 LYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVK  383 (430)
Q Consensus       304 ~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~  383 (430)
                      +++||+++.++.+..+|++++++||++++.+|+.+.++.||+.+++ .+|....+.++.||.++++|.+.+.++++.|++
T Consensus       240 ~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~-s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~  318 (365)
T COG1932         240 MYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDK-SDFYRNLVAKANRSRMNVTFTLVDAELDKGFVA  318 (365)
T ss_pred             ccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCccccccchhhccceeEEEEcCcHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999997 488877777799999999999987777888999


Q ss_pred             HHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          384 EAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       384 ~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      ++.++|+....|++..|++|+|+++.++.|||++|+++|+.+.+++.
T Consensus       319 eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~~~  365 (365)
T COG1932         319 EAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEETYK  365 (365)
T ss_pred             HHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHhhC
Confidence            99999999999999999999999999999999999999999998874

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=100.00  E-value=6.2e-55  Score=433.67  Aligned_cols=356  Identities=57%  Similarity=0.919  Sum_probs=304.6

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      +.++|+|||+++|++|+++|...+.+|.+.|.+.++++||+++|.++++++++.|++++|+++++++++++|++|.+|++
T Consensus         3 ~~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea   82 (360)
T PRK05355          3 RVYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAM   82 (360)
T ss_pred             ceeeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHH
Confidence            57899999999999999999999988888888888999999999999999999999999997667899999999999999


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCcccc--ccCCCccEEEEeecCCCccccCCC
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDAL--EQNPDAKYLHICANETIHGVEFKE  227 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l--~i~~~~~lv~i~~~~t~tG~~~pe  227 (430)
                      ++.|++.+||+++++.+|.|+++|.+.++++|...++....  .+|.....+..  .+++++++|+++|+||+||+++|.
T Consensus        83 ~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~--~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~  160 (360)
T PRK05355         83 VPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEVNVAASSE--DDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHE  160 (360)
T ss_pred             HHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccc--ccCCCCCCChhhccCCCCCCEEEEccCCCcceEecCc
Confidence            99999999999999999999999999999999445555432  24532222222  267789999999999999999964


Q ss_pred             CccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCC
Q 043610          228 YPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT  307 (430)
Q Consensus       228 i~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T  307 (430)
                      |.++  +|++++||++|++|+.|+|++++|++++|+||++||+|+|++++++++++++.+..+.|+++....++..++||
T Consensus       161 i~~i--~g~l~vVDavss~g~~~idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~T  238 (360)
T PRK05355        161 LPDT--GDVPLVADMSSDILSRPIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNT  238 (360)
T ss_pred             cccc--CCCcEEEEcCccccCccCCHHHccEEEEeccccccCCceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCC
Confidence            5555  79999999999999999999999999999999999999999999999999876644667777655556677899


Q ss_pred             ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHH
Q 043610          308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAK  387 (430)
Q Consensus       308 ~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~  387 (430)
                      ||+..++++.++|+++.+++|++++.+|+++++++++++|++ .|+.....++..|++++++|.+++.....++.+.+.+
T Consensus       239 p~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~  317 (360)
T PRK05355        239 PPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDS-SDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKA  317 (360)
T ss_pred             CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHHHH
Confidence            999999999999999986548999999999999999999997 5643221233468888899999863222367778888


Q ss_pred             cCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          388 EKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       388 ~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      +|+.+..|+...|.+|+|+++|||.+||++|+++|++++.+|.
T Consensus       318 ~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~~  360 (360)
T PRK05355        318 AGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERRHG  360 (360)
T ss_pred             CCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHhcC
Confidence            9999877765457899999999999999999999999998873

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=100.00  E-value=5.5e-54  Score=424.96  Aligned_cols=348  Identities=63%  Similarity=1.002  Sum_probs=301.4

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCC
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND  159 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd  159 (430)
                      .+|..|++++.+++.++++.|.+.++++||+++|.++++++++.|+++++++.+++|++++||||+||++++.+++.+||
T Consensus         2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~   81 (349)
T TIGR01364         2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGK   81 (349)
T ss_pred             CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence            57899999999999888888999999999999999999999999999999976678999989899999999999998999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCCCCccccCCCcEEE
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILV  239 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~pei~~~~~~g~~lv  239 (430)
                      +++++.+|.|+++|.++++++|.+.++...+..+|++.++++++++++++++|+++|+||+||+.+|++++.  ++++++
T Consensus        82 ~~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~~l~~~--~~~l~i  159 (349)
T TIGR01364        82 VADYIVTGAWSKKAAKEAKKYGVVNVVASGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFRELPDV--KNAPLV  159 (349)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCCcEEEeccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecceeccc--CCCeEE
Confidence            999999999999999999999865555543222477778887777778999999999999999999855554  689999


Q ss_pred             EeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHH
Q 043610          240 ADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLV  319 (430)
Q Consensus       240 vD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~a  319 (430)
                      ||++|++|+.|+|++++|++++|+||++||+|+|++++++++++++.+..+.+++|....+++..+||||+..++++.++
T Consensus       160 VDavss~g~~~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~a  239 (349)
T TIGR01364       160 ADMSSNILSRPIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLV  239 (349)
T ss_pred             EEccccccCccCCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999877766667766443445667799999999999999


Q ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCC
Q 043610          320 FEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSV  399 (430)
Q Consensus       320 l~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~  399 (430)
                      |+++.+++|++++.+|+++++++++++|++..|+.....++..|++++++|.+++.....++.+.+.++|+++..|+...
T Consensus       240 l~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~  319 (349)
T TIGR01364       240 FKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSV  319 (349)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcccc
Confidence            99998655899999999999999999999854776553334468878899998853333467788888999777776656


Q ss_pred             CeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          400 GGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       400 g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      |.+|+|+++||++|||++|+++|++++++|
T Consensus       320 g~vRvS~~~~nt~edid~l~~al~~~~~~~  349 (349)
T TIGR01364       320 GGMRASIYNAMPLEGVQALVDFMKEFQKKH  349 (349)
T ss_pred             CeeEEECcCCCCHHHHHHHHHHHHHHHHhC
Confidence            789999999999999999999999999886

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=100.00  E-value=8.9e-52  Score=411.35  Aligned_cols=353  Identities=62%  Similarity=1.005  Sum_probs=294.2

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      ++|+|||+++|++|+++|.+++.++.+.|.+.+..+||++++.++++++|+.+++++|++++++|+|++||+|++++.++
T Consensus         1 ~~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~   80 (355)
T cd00611           1 INFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVP   80 (355)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHH
Confidence            57999999999999999999987655667777789999999999999999999999999665689998777999999999


Q ss_pred             hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCCCCcc
Q 043610          152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPS  230 (430)
Q Consensus       152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~pei~~  230 (430)
                      .+++.++++.+++.++.|+++|.+.++++| ++++++..++..++..++.++.++++++++|+++|++|.||++++++++
T Consensus        81 ~~l~~~~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~~i~~  160 (355)
T cd00611          81 LNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFDEVPD  160 (355)
T ss_pred             HhcCCCCCeEEEEECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcceecc
Confidence            999877788887888999999998999999 8888876421113333433333467899999999999999999876655


Q ss_pred             ccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccH
Q 043610          231 AKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPC  310 (430)
Q Consensus       231 ~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~  310 (430)
                      .  +|++++||++|++|++|+|++++|++++|+||++||+|+|++++++++++++.+..+.++++....+...++||||+
T Consensus       161 ~--~g~~~~VDa~qs~g~~~idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~  238 (355)
T cd00611         161 T--GGVPLVADMSSNILSRPIDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPT  238 (355)
T ss_pred             c--CCCeEEEEccccccCCCCCHHHhCEEEeecccccCCCceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChH
Confidence            4  89999999999999999999999988888999999999999999999999877666666655443345556799999


Q ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCC
Q 043610          311 YCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKM  390 (430)
Q Consensus       311 ~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi  390 (430)
                      .+++++.++|+++.+++|++++.+|+++++++++++|.+.+|+...+.++..|++.+++|.+++.....++...+.++|+
T Consensus       239 ~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~  318 (355)
T cd00611         239 FAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEFLKEAEAAGM  318 (355)
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHHHHHHHHCCC
Confidence            99999999999998655899999999999999999999855864232344457877799998753123456667788999


Q ss_pred             eecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          391 VQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       391 ~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ....+++..|.+|+|+++|||++||++|+++|+++.
T Consensus       319 ~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~~  354 (355)
T cd00611         319 IGLKGHRSVGGIRASIYNALSLEGVQALADFMKEFQ  354 (355)
T ss_pred             cccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence            876777656889999999999999999999999865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=9.9e-51  Score=395.91  Aligned_cols=339  Identities=23%  Similarity=0.349  Sum_probs=300.0

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      .++++|||++++++|+++|...+            .+|++++|.+++.++.+.|+.+|+++.. ++++++||+|.+++++
T Consensus         6 ~~Ll~PGP~~v~~~V~~am~~~~------------~~h~s~~F~~~~~~~~~~L~~v~~t~~~-~~~ll~gsGt~amEAa   72 (383)
T COG0075           6 RLLLTPGPVPVPPRVLLAMARPM------------VGHRSPDFVGIMKEVLEKLRKVFGTENG-DVVLLSGSGTLAMEAA   72 (383)
T ss_pred             ceeeeCCCCCCCHHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhcCCCC-cEEEEcCCcHHHHHHH
Confidence            78999999999999999998754            5799999999999999999999999853 6888899999999999


Q ss_pred             HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c--CCCccEEEEeecCCCccccC
Q 043610          151 PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q--NPDAKYLHICANETIHGVEF  225 (430)
Q Consensus       151 ~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~~lv~i~~~~t~tG~~~  225 (430)
                      +.|+++|||+|+++.+|.||++|.++++++| +++.+..    +||+.+++++++  +  +++.++|+++|+||+||+++
T Consensus        73 v~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~----~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvln  148 (383)
T COG0075          73 VASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV----EWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLN  148 (383)
T ss_pred             HHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC----CCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccC
Confidence            9999999999999999999999999999999 8888877    489999999987  4  47899999999999999999


Q ss_pred             C--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCC-CC-ccccccc
Q 043610          226 K--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK-TP-LMLDYKI  297 (430)
Q Consensus       226 p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~-~p-~~~~~~~  297 (430)
                      |  +|+++ +++|++++||+++++|..++++++|  |+++.++||+++ |||+|++.+|+++++.+... .+ +|+|+..
T Consensus       149 pl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~  228 (383)
T COG0075         149 PLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKK  228 (383)
T ss_pred             cHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHH
Confidence            9  89996 7899999999999999999999998  799999999995 99999999999999986542 34 7888765


Q ss_pred             h---hh-cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          298 H---DE-NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       298 ~---~~-~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                      +   .+ ++.+++||++..++++.+||+.+++ +|++++.+|++++++.+++++++ +|++++. +++.+|++++++.+|
T Consensus       229 ~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~-EGle~r~~RH~~~~~a~r~~~~a-lGl~~~~-~~~~~s~tvta~~~P  305 (383)
T COG0075         229 WLKYMEKKGSTPYTPPVNLIYALREALDLILE-EGLEARIARHRRLAEALRAGLEA-LGLELFA-DPERRSPTVTAIKVP  305 (383)
T ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-cCCcccc-CcccCCCceEEEECC
Confidence            4   22 3788899999999999999999985 58999999999999999999996 9999996 788899999999998


Q ss_pred             CCchhHHHHHH-HHHcCCeecCCCCCCC--eeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          374 KSDLEAEFVKE-AAKEKMVQLKGHRSVG--GMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       374 ~~~~~~~~~~~-L~~~Gi~~~~g~~~~g--~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ..-.+.++... +++.|+.+..|+....  .+||+++++.+.+|+..++.+|+..+++.
T Consensus       306 ~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~  364 (383)
T COG0075         306 EGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL  364 (383)
T ss_pred             CCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence            63222333334 4556999988876544  79999999999999999999999988754

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=100.00  E-value=2.1e-46  Score=375.79  Aligned_cols=343  Identities=20%  Similarity=0.266  Sum_probs=274.9

Q ss_pred             CCCCceeecCCCCCCcHH-HHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           67 QEDRVFNFAAGPANLPEK-VLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~-V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      ..+..++|.+||+++++. |++++...+.          +.+||+++|.++++++|+.+++++|++++++|+|++||+|+
T Consensus         9 ~~~~~~~f~~Gp~~~~~~~v~~a~~~~~~----------~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~   78 (378)
T PRK03080          9 LRPADPRFSSGPCKKRPGWQLEALADALL----------GRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTG   78 (378)
T ss_pred             cCCCCCCcCCCCcCCChHHHHHHHHhhhc----------ccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHH
Confidence            345567799999999999 9999986542          24689999999999999999999999766689998889999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHH-HHhC--CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEA-QKFC--NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a-~~~g--~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG  222 (430)
                      ++++++.+++++ +.++++.++.|+.+|...+ +++|  +++++..    +++..+|+++++  . ++.|+++|++|.||
T Consensus        79 ~~~~~~~~l~~~-~~~~vi~~g~f~~~~~~~~~~~~g~~~v~~~~~----~~g~~~d~~~i~--~-~~~V~~~h~~t~tG  150 (378)
T PRK03080         79 AWEMALWSLLGA-RRVDHLAWESFGSKWATDVVKQLKLEDPRVLEA----DYGSLPDLSAVD--F-DRDVVFTWNGTTTG  150 (378)
T ss_pred             HHHHHHHhcCCC-CcceEEEeCHHHHHHHHHHHhhcCCCCceEecc----CCCCCCCHhhcC--C-CCCEEEEecCCccc
Confidence            999999999864 3444556799999998744 5555  5566654    256567766654  2 67899999999999


Q ss_pred             ccCC--CCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCC-----CCcccc
Q 043610          223 VEFK--EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK-----TPLMLD  294 (430)
Q Consensus       223 ~~~p--ei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~-----~p~~~~  294 (430)
                      +++|  +|++ +++|++++||++|++|+.|+|++++||+++|+|||+ ||+|+|++|+++++++.+.+.     .|.+++
T Consensus       151 ~~~pi~~I~~-~~~g~~~vVDa~qs~G~~pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~  229 (378)
T PRK03080        151 VRVPVARWIG-ADREGLTICDATSAAFALPLDWSKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFR  229 (378)
T ss_pred             eeccchhhcc-ccCCCeEEEecccccccCCCCHHHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhhe
Confidence            9999  7888 889999999999999999999999999999999999 599999999999999886542     234555


Q ss_pred             ccc---hhh---cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          295 YKI---HDE---NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       295 ~~~---~~~---~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      +..   ...   .+.+++||++.+++++.++|+++.+.+|++++.+|+++++++++++|++..++.++..++..++.+++
T Consensus       230 ~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~  309 (378)
T PRK03080        230 LTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSV  309 (378)
T ss_pred             eccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEE
Confidence            443   111   23456789999999999999999865589999999999999999999975456665434455777789


Q ss_pred             EEEcCCC--chhHHHHHHHHHcCCeecCC-CCC-CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          369 PFTLEKS--DLEAEFVKEAAKEKMVQLKG-HRS-VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       369 ~f~~~~~--~~~~~~~~~L~~~Gi~~~~g-~~~-~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +|.+++.  +.+.++..+|.++|+++..| ++. .+.+|||+++||+++||++++++|++++++
T Consensus       310 ~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~  373 (378)
T PRK03080        310 TLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFER  373 (378)
T ss_pred             EEEcCCchHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence            9988741  13346777787778776543 332 467999999999999999999999998764

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=100.00  E-value=9.2e-46  Score=366.59  Aligned_cols=332  Identities=17%  Similarity=0.228  Sum_probs=275.0

Q ss_pred             eecCCCCCCcHH-HHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           73 NFAAGPANLPEK-VLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        73 l~~~gp~~~~~~-V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      .|+|||+.+.|. .++++.+.          +++++||+++|.++++++++.|+++++++.+|++++++||||.+|++++
T Consensus         6 ~f~~gp~~~~~~~~~~~~~~~----------~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~   75 (374)
T TIGR01365         6 CFSSGPCAKRPGWSIEELKNA----------PLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMAL   75 (374)
T ss_pred             CcCCCccCCCchhhHHHHhhh----------hcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHH
Confidence            689999999999 55555543          3468999999999999999999999999877899999999999999999


Q ss_pred             hhcC-CCCCcEEEEeCChhHHHHH-HHHHHhC-C-ceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC-
Q 043610          152 LNLC-TPNDPVDYIVTGSWGDKAF-KEAQKFC-N-PQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK-  226 (430)
Q Consensus       152 ~sl~-~~gd~vl~~~~g~~~~~~~-~~a~~~g-~-~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p-  226 (430)
                      .|++ ++|+++++  .|.||.+|. ++++++| . +.++..    +||+.+++++++..   +.|+++|+||+||+++| 
T Consensus        76 ~nl~~~~g~~vLv--~g~FG~r~~~eia~~~g~~~v~~l~~----~~g~~~~~~~ve~~---~~v~~vhnETSTGv~npv  146 (374)
T TIGR01365        76 WSMLGCRGVDVLA--WESFGKGWVTDVTKQLKLPDVRVLEA----EYGKLPDLKKVDFK---NDVVFTWNGTTSGVRVPN  146 (374)
T ss_pred             HHcCCCCCCeEEE--ECHHHHHHHHHHHHhcCCCCcEEEcC----CCCCCCCHHHcCCC---CCEEEecCCCchheeccc
Confidence            9998 57888875  579999999 8999998 4 566654    48888998888732   23789999999999999 


Q ss_pred             -CCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCC-----CCccccccc--
Q 043610          227 -EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK-----TPLMLDYKI--  297 (430)
Q Consensus       227 -ei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~-----~p~~~~~~~--  297 (430)
                       ++.... ++++++||+++++|+.|++++++|++++|+||++| |+|++++++|+++++++...     .|.|+++..  
T Consensus       147 ~~i~~~~-~~~lliVDavSs~g~~~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~  225 (374)
T TIGR01365       147 GDFIPAD-REGLTICDATSAAFAQDLDYHKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGG  225 (374)
T ss_pred             ccccccc-CCCcEEEEccchhcCCCCChhHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhcccccc
Confidence             455322 57999999999999999999999999999999996 99999999999999885432     123444322  


Q ss_pred             ----hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC-ceecCCCCCCCccceEEEEc
Q 043610          298 ----HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG-FYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       298 ----~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-~~~~~~~~~~rs~~iv~f~~  372 (430)
                          ...++++++||++..++++..+|+++++++|++++.+|++++++.+++++++ +| +.++..+++.||++++++.+
T Consensus       226 ~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~-lg~l~~~~~~~~~rS~tvt~v~~  304 (374)
T TIGR01365       226 KLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAK-NNWIHFLAETPEIRSNTSVCLKV  304 (374)
T ss_pred             chhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-CCCcccCCCChhhcCCCeEEEEe
Confidence                1234678899999999999999998886679999999999999999999997 78 77765346679999999988


Q ss_pred             CCCch-----------hHHHHHHHHHcCCeecCCCCC-C-CeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          373 EKSDL-----------EAEFVKEAAKEKMVQLKGHRS-V-GGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       373 ~~~~~-----------~~~~~~~L~~~Gi~~~~g~~~-~-g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ++.+.           ..+|.+.|+++||.+.+|... . ..+||+++++.+.+||++++++|.=+
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~  370 (374)
T TIGR01365       305 VDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWA  370 (374)
T ss_pred             CCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence            65332           236888899999998876542 2 47999999999999999999998643

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.4e-45  Score=369.19  Aligned_cols=350  Identities=19%  Similarity=0.231  Sum_probs=284.8

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ..+.+|+++++.++.|..|++++.+++.+++.+...  ..+..+....+.++++|+.+|+++|+++.++|+|+ .|+|++
T Consensus        20 ~~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r--~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft-~~tT~a   96 (405)
T COG0520          20 GKPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHR--GAHTLAEEATDLYEAAREAVARFLNADSSDEIVFT-RGTTEA   96 (405)
T ss_pred             CCCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCc--ccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEe-CChhHH
Confidence            456699999999999999999999998765543221  01123456678999999999999999853388875 789999


Q ss_pred             HHHHHhhc---CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          147 FAAVPLNL---CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       147 ~~~~~~sl---~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      ++.++.++   +++||+|++....|.+.  .|...+++.| ++++++..+   .| .++.++++  ++++||+|+++|++
T Consensus        97 ln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~---~g-~~~~~~~~~~i~~~Tklvais~vS  172 (405)
T COG0520          97 LNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD---DG-LLDLDALEKLITPKTKLVALSHVS  172 (405)
T ss_pred             HHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC---CC-CcCHHHHHHhcCCCceEEEEECcc
Confidence            99999998   58999999887776654  6888888889 899898763   34 57888887  78999999999999


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCc-
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPL-  291 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~-  291 (430)
                      |.||.++|  +|.++ +++|++++||++|++|+.|+|++++  ||+++|+|||+ ||.|+|+||+++++++.+.|.... 
T Consensus       173 n~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg  252 (405)
T COG0520         173 NVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGG  252 (405)
T ss_pred             ccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCC
Confidence            99999999  89997 8999999999999999999999987  69999999988 799999999999999987553210 


Q ss_pred             -cccccch------hh--cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          292 -MLDYKIH------DE--NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       292 -~~~~~~~------~~--~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                       +.++...      .+  .....||||+.+.+++.+|++++++ .|++++.+|.++|.+++.+.|.+.++++++...+..
T Consensus       253 ~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~-ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~  331 (405)
T COG0520         253 GMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLE-IGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDAD  331 (405)
T ss_pred             CceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCccc
Confidence             1111100      01  1223489999999999999999985 589999999999999999999998899988533335


Q ss_pred             CccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC----------CCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS----------VGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~----------~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      |. .+++|.+++  .+. ++.+.|.++||.+..|+..          .+.+|+|++.|||+||||+|+++|+++.+
T Consensus       332 r~-~~vsF~v~~--~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         332 RG-GIVSFNVKG--IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             Cc-eEEEEEeCC--CCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence            66 478999985  334 8999999999887666421          23499999999999999999999999864

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=100.00  E-value=8.3e-45  Score=361.58  Aligned_cols=338  Identities=20%  Similarity=0.288  Sum_probs=272.9

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      --|+|||+++|++|+++|...       +.+.++++||+++|.++++++|+.+++++|++++++|+|+++|+|.+|++++
T Consensus         5 ~~f~pGP~~~~~~v~~a~~~~-------~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~   77 (361)
T TIGR01366         5 GRFGSGPSKVRLEQLQALTTT-------AASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAAT   77 (361)
T ss_pred             CcccCCCcCCCHHHHHHHHhc-------CccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHH
Confidence            358999999999999998753       2234457899999999999999999999999766689998899999999999


Q ss_pred             hhcCCCCCcEEEEeCChhHHHHHHHHHHh---CCceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--
Q 043610          152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKF---CNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--  226 (430)
Q Consensus       152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~---g~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--  226 (430)
                      .+++.  ++++++.+|.|+.+|...+...   +++.+++..    +++.++.   ++++++++|+++|++|+||+++|  
T Consensus        78 ~~l~~--~~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~lV~~~h~et~tG~~~pi~  148 (361)
T TIGR01366        78 FGLIE--KKSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTAD----PGSAPEP---QADPGVDVIAWAHNETSTGVAVPVR  148 (361)
T ss_pred             Hhccc--ccccEEecCHHHHHHHHHHHhhhccCCceEEecC----CCCCCCC---ccCCCCCEEEEcccCCccceecccc
Confidence            99974  2466677899999998888763   466666542    3433322   25689999999999999999999  


Q ss_pred             CCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCcccc-CCccEEEEEcHHHHhccCC------CCCccccccchh
Q 043610          227 EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQD------KTPLMLDYKIHD  299 (430)
Q Consensus       227 ei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~------~~p~~~~~~~~~  299 (430)
                      +|+  +++|++++||++|++|+.++|++++|++++|+|||+| |+|++++++|+++++++.+      ..|.++++....
T Consensus       149 ~I~--~~~g~~~iVDavqs~g~~~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~  226 (361)
T TIGR01366       149 RPE--GSDDALVVIDATSGAGGLPVDIAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAV  226 (361)
T ss_pred             ccc--ccCCCeEEEEcCccccCCCCCHHHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHH
Confidence            663  6789999999999999999999999999999999997 6789999999999987653      124566655433


Q ss_pred             h---cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc
Q 043610          300 E---NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       300 ~---~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~  376 (430)
                      +   .+.+++||++..++++.++++++.+++|++.+.+|++++++++++++.+..+++++...+..+++.+.++.+++ +
T Consensus       227 ~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~-g  305 (361)
T TIGR01366       227 DNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVD-D  305 (361)
T ss_pred             hccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCC-c
Confidence            2   24567899999999999999999876679999999999999999999984445555323333565556666654 4


Q ss_pred             hhH-HHHHHHHHcCCeecCCCCCC--CeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          377 LEA-EFVKEAAKEKMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       377 ~~~-~~~~~L~~~Gi~~~~g~~~~--g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+. ++.+.|+++||.+..++...  +.+|||+++|+|++||++++++|++++++
T Consensus       306 ~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~  360 (361)
T TIGR01366       306 IDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER  360 (361)
T ss_pred             cCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence            555 78889998999987765432  36999999999999999999999998765

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PLN02409 serine--glyoxylate aminotransaminase

Probab=100.00  E-value=2.4e-44  Score=363.74  Aligned_cols=340  Identities=19%  Similarity=0.231  Sum_probs=282.7

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ++.++|+|||++++++|+++|...+            .+|+++++.++++++++.+++++|++.+ +++++++++|++++
T Consensus         8 ~~~~l~~pGP~~~~~~V~~a~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~vi~~~~gt~a~~   74 (401)
T PLN02409          8 GRNHLFVPGPVNIPERVLRAMNRPN------------EDHRSPAFPALTKELLEDVKYIFKTKSG-TPFIFPTTGTGAWE   74 (401)
T ss_pred             CCceeccCCCCCCCHHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHH
Confidence            4568999999999999999997653            4678899999999999999999999865 34555689999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC----CccEEEEeecCCCc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP----DAKYLHICANETIH  221 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~----~~~lv~i~~~~t~t  221 (430)
                      .++.+++++||+|++.++++++.+|...+++.| +++.++..    ++..+++++++  +++    ++++|+++|++|+|
T Consensus        75 ~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~----~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~t  150 (401)
T PLN02409         75 SALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESP----WGQGADLDILKSKLRQDTNHKIKAVCVVHNETST  150 (401)
T ss_pred             HHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECC----CCCCCCHHHHHHHHhhCcCCCccEEEEEeecccc
Confidence            999999999999999999999999988888888 88888764    23346778887  543    79999999999999


Q ss_pred             cccCC--CCccc---cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC--CCc
Q 043610          222 GVEFK--EYPSA---KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK--TPL  291 (430)
Q Consensus       222 G~~~p--ei~~~---~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~--~p~  291 (430)
                      |.++|  +|.++   +++|+++++|++|++|..|+|++++  |++++|+|||+ ||+|+|++++++++++.+.+.  .+.
T Consensus       151 G~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~  230 (401)
T PLN02409        151 GVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRV  230 (401)
T ss_pred             cccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCe
Confidence            99999  67765   4789999999999999999999876  79999999999 699999999999998876542  345


Q ss_pred             cccccchh---hcC-CCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          292 MLDYKIHD---ENN-SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       292 ~~~~~~~~---~~~-~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      +++|....   +.+ .+.+|||+..++++.++++++.+ .|++++++|+++++++++++|++ +|++++..++..+++++
T Consensus       231 ~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~-~G~e~i~~~~~~l~~~l~~~L~~-~g~~~~~~~~~~~s~~v  308 (401)
T PLN02409        231 FFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFE-EGLENVIARHARLGEATRLAVEA-WGLKLCTKKPEWRSDTV  308 (401)
T ss_pred             ecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-cCCeeccCChhhcccce
Confidence            66653321   122 23679999999999999999874 59999999999999999999986 79988754445678888


Q ss_pred             EEEEcCCCchhH-HHHHHH-HHcCCeecCCCCC--CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          368 VPFTLEKSDLEA-EFVKEA-AKEKMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       368 v~f~~~~~~~~~-~~~~~L-~~~Gi~~~~g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++|.+|+ +.+. ++.+.| ++.||.+..|...  .+.||||+++|++++|+.+++++|++.+..
T Consensus       309 ~~~~~p~-~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~  372 (401)
T PLN02409        309 TAVVVPE-GIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKD  372 (401)
T ss_pred             EEEeCCC-CCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence            8888875 3444 687777 4669998887654  347999999999999999999999998764

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=100.00  E-value=1.9e-44  Score=361.18  Aligned_cols=338  Identities=24%  Similarity=0.303  Sum_probs=273.5

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      +|++++|++++|+.|++++.+++.++.+++.+  ..++++.++.++++++|+.+++++|++++++|+|+ +|+|++++.+
T Consensus         1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~-~~~t~a~~~~   77 (371)
T PF00266_consen    1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHS--GVSHRSREFAEILEEAREALAKLLGAPPDEEVVFT-SNGTEALNAV   77 (371)
T ss_dssp             EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTST--SSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEE-SSHHHHHHHH
T ss_pred             CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcc--cccchhhhhhHHHHHHHHHHHHhcCCccccccccc-cccchhhhhh
Confidence            69999999999999999999999887766644  35778899999999999999999999985477775 7899999999


Q ss_pred             Hhhc---CCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          151 PLNL---CTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       151 ~~sl---~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      +.++   +++||+|++...++++..  |...+++.| ++++++...    +..+|+++++  +++++++|+++|++|.||
T Consensus        78 ~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~----~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG  153 (371)
T PF00266_consen   78 ASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADP----GGSLDLEDLEEALNPDTRLVSISHVENSTG  153 (371)
T ss_dssp             HHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGT----TSSCSHHHHHHHHHTTESEEEEESBETTTT
T ss_pred             hhccccccccccccccccccccccccccccccccchhhhccccccc----cchhhhhhhhhhhccccceEEeeccccccc
Confidence            9999   789999999999999987  666667788 888887642    3357888887  789999999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc--cccc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL--MLDY  295 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~--~~~~  295 (430)
                      +++|  +|.++ +++|+++++|++|++|.+++|++++  |++++|+||++||+|+|++|+++++++++++..+.  +.+.
T Consensus       154 ~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~  233 (371)
T PF00266_consen  154 VRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYLDF  233 (371)
T ss_dssp             BBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTH
T ss_pred             EEeeeceehhhhhccCCceeEechhccccccccccccccceeeecccccCCCCchhhheehhhhhhcccccccccccccc
Confidence            9999  78885 6789999999999999999999987  68999999955899999999999999987553321  1111


Q ss_pred             cch-----hh--cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          296 KIH-----DE--NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       296 ~~~-----~~--~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      ...     ..  .....||+|+..++++..+++++. +.|++++.+|+.++.+++++.|.+..++.++..+...+++.++
T Consensus       234 ~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~-~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~  312 (371)
T PF00266_consen  234 PSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLE-EIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIV  312 (371)
T ss_dssp             HHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEE
T ss_pred             ccchhcccccccccccccceeeehhhhHHHHHhhhh-ccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceE
Confidence            110     01  112357999999999999999986 5699999999999999999999987777776434556677889


Q ss_pred             EEEcCCCchhH-HHHHHHHHcCCeecCCCCCC----------CeeEEeecCCCCHHHHHHH
Q 043610          369 PFTLEKSDLEA-EFVKEAAKEKMVQLKGHRSV----------GGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       369 ~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~~----------g~iRis~~~~~t~edv~~l  418 (430)
                      +|.+++  .+. ++.+.|.++||.+..|....          ++||||+++|||++|||+|
T Consensus       313 ~~~~~~--~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  313 SFNLPG--SDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             EEEETT--SSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             EEeecC--CCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence            999975  334 78889998899987765433          7899999999999999986

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=1.3e-43  Score=343.44  Aligned_cols=338  Identities=17%  Similarity=0.152  Sum_probs=281.9

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      .+|+++...+|+.+.|+++|..++...+++++|.   +..+.+....++++|+.+|+++|++++ +|+|+ +|+||+++.
T Consensus         2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~---H~~G~~A~~~ve~AR~~iA~llga~~~-eIiFT-SG~TEsnNl   76 (386)
T COG1104           2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSL---HSFGREARKAVEEAREQIAKLLGADPE-EIIFT-SGATESNNL   76 (386)
T ss_pred             cccccccccCCCCHHHHHHHHHHHHhhcCCccch---hHhHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-cCCcHHHHH
Confidence            5899999999999999999999998888888874   445788999999999999999999985 88885 899999999


Q ss_pred             HHhhc--CC----CCCcEEEEeCChhHH-HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          150 VPLNL--CT----PNDPVDYIVTGSWGD-KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       150 ~~~sl--~~----~gd~vl~~~~g~~~~-~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      ++.+.  ..    .|.++++....+.+- ...+..++.| ++.+++++.   +| .+|+++|+  ++++|.+|.+.|+||
T Consensus        77 aI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~---~G-~v~~e~L~~al~~~T~LVSim~aNn  152 (386)
T COG1104          77 AIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS---NG-LVDLEQLEEALRPDTILVSIMHANN  152 (386)
T ss_pred             HHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC---CC-eEcHHHHHHhcCCCceEEEEEeccc
Confidence            98873  21    477888766666553 1222334568 999999864   56 68999998  899999999999999


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCcccccc--ccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcccc
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTR--FGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~--~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~  294 (430)
                      .+|+++|  +|.++ ++++++|++|++|++|.+|+|+++  .|++.+|+||++||.|+|+||++++..     ..|.+. 
T Consensus       153 E~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~-----~~p~i~-  226 (386)
T COG1104         153 ETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVR-----LEPLIH-  226 (386)
T ss_pred             CeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECCCCc-----cCceec-
Confidence            9999999  89996 789999999999999999999998  489999999999999999999976651     234333 


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEEEEcC
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                       ...++.+.+.||.|++++.++.+|++...+  .++...+|...|++++.+.|.+. +++.+.. ++..|.|.++.|.++
T Consensus       227 -GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~--~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g-~~~~rlP~~~~~~f~  302 (386)
T COG1104         227 -GGGQERGLRSGTENVPGIVGFGKAAEIAVE--ELEEENARLRKLRDRLEDGLLEIIPDVYLNG-DDEPRLPNILNFSFP  302 (386)
T ss_pred             -cCcCCCCCCCCCccHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCcEEEcC-CcccCCCCeEEEEeC
Confidence             234577888999999999999999997653  68999999999999999999975 5676654 446799999999999


Q ss_pred             CCchhH-HHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          374 KSDLEA-EFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       374 ~~~~~~-~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +  .+. .+.-.|..+||.+..|.-                     ..+.||||++.+||++||+++++.|++++++
T Consensus       303 g--v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~  377 (386)
T COG1104         303 G--VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKR  377 (386)
T ss_pred             C--CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence            5  445 467778889999755430                     1357999999999999999999999998775

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=100.00  E-value=2.3e-43  Score=324.65  Aligned_cols=338  Identities=17%  Similarity=0.295  Sum_probs=289.6

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      ..||+|||++++++|+++|....            .+|++++|..+++++++.++.+|.+..+ ..+++.++|+.||+++
T Consensus        18 ~~L~gPGPsnl~~~V~~A~~~~~------------lgh~sPe~~qIm~~v~egikyVFkT~n~-~tf~isgsGh~g~E~a   84 (385)
T KOG2862|consen   18 RTLLGPGPSNLSGRVQEAMSRPS------------LGHMSPEFVQIMDEVLEGIKYVFKTANA-QTFVISGSGHSGWEAA   84 (385)
T ss_pred             ceeecCCCcCCCHHHHHhhcCCc------------cccCCHHHHHHHHHHHHHHHHHhccCCC-ceEEEecCCcchHHHH
Confidence            44999999999999999986533            6789999999999999999999999876 4566679999999999


Q ss_pred             HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEEEEeecCCCccccCC
Q 043610          151 PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       151 ~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      +.|++.|||.+++..+|-||++|.+.++++| ++++++.    ++|+...++++.  + ..++++|+++|++++||+++|
T Consensus        85 l~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~----~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~  160 (385)
T KOG2862|consen   85 LVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEA----DIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQD  160 (385)
T ss_pred             HHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEec----CcccCccHHHHHHHHHhcCCceEEEEecCccccccch
Confidence            9999999999999999999999999999999 9999976    378788888886  4 457899999999999999999


Q ss_pred             --C-Cccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCC--C--CCccccc
Q 043610          227 --E-YPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQD--K--TPLMLDY  295 (430)
Q Consensus       227 --e-i~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~--~--~p~~~~~  295 (430)
                        + +.++ ++|+++++||.+.|+|..++.+++|  |+.+.++||.+| |+|++++..|+++.+.++.  .  ..+|||+
T Consensus       161 ~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~  240 (385)
T KOG2862|consen  161 LLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDI  240 (385)
T ss_pred             HHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeH
Confidence              3 4455 6999999999999999999999999  799999999996 9999999999999988653  2  2367775


Q ss_pred             cch----h---hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          296 KIH----D---ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       296 ~~~----~---~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      ...    .   +.+.++.|+++..+|++.+||..+.+ +|++++++|+++++++++..|.+ +|++.+.++++.|+++++
T Consensus       241 ~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~e-eGL~~~~~rH~e~s~~l~~~l~~-~GLq~fv~~e~~rlptvt  318 (385)
T KOG2862|consen  241 LRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAE-EGLENSWRRHREMSKWLKLSLEA-LGLQLFVVDEELRLPTVT  318 (385)
T ss_pred             HhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-hCccceecChhhccCcce
Confidence            431    1   22456689999999999999999985 59999999999999999999996 899998778888999999


Q ss_pred             EEEcCCCchhH-HHHHHHHHc-CCeecCCCCC--CCeeEEeecCCC-CHHHHHHHHHHHHHHHHh
Q 043610          369 PFTLEKSDLEA-EFVKEAAKE-KMVQLKGHRS--VGGMRASIYNAM-PLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       369 ~f~~~~~~~~~-~~~~~L~~~-Gi~~~~g~~~--~g~iRis~~~~~-t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+|. +.|. +++.++..+ ++.+..|...  ...+||++.+.| +.|-|+..++.|+..+++
T Consensus       319 tv~vp~-gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~  382 (385)
T KOG2862|consen  319 TVKVPY-GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR  382 (385)
T ss_pred             eeecCC-CCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence            999986 5566 899998887 5555555543  226999988866 578899999999988765

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=100.00  E-value=1.7e-41  Score=338.84  Aligned_cols=340  Identities=18%  Similarity=0.263  Sum_probs=274.8

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ++.++|+|||+.+++.|+++|...+             .|++++|.+.++++|+.+++++|++++++.+++++|+|++++
T Consensus         2 ~~~~l~~pgp~~~~~~v~~~~~~~~-------------~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~   68 (363)
T TIGR02326         2 RNYLLLTPGPLTTSRTVKEAMLFDW-------------CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVE   68 (363)
T ss_pred             CceeEecCCCCCCCHHHHHHhCCCC-------------CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHH
Confidence            3467999999999999999986542             345689999999999999999999765444555689999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCccEEEEeecCCCccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICANETIHGV  223 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~~~t~tG~  223 (430)
                      .++.++..+||+++++.+++|+.++...+++.| +++.++..+    +..+|+++++  ++  +++++|.++|++|+||+
T Consensus        69 ~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~  144 (363)
T TIGR02326        69 AVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE----VEPPDVVEVEAILAADPAITHIALVHCETTTGI  144 (363)
T ss_pred             HHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC----CCCCCHHHHHHHHhhCCCccEEEEEeecCCccc
Confidence            999999888999888888999887767778888 888887742    2346888876  43  46788999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCC-CCCcccccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD-KTPLMLDYK  296 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~-~~p~~~~~~  296 (430)
                      ++|  +|.++ +++|+++++|++|++|..|+|++++  |++++|+|||+ ||+|+|++++++++++.+.+ ..+.+++..
T Consensus       145 ~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~  224 (363)
T TIGR02326       145 LNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLY  224 (363)
T ss_pred             cCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHH
Confidence            999  78886 7899999999999999999999876  79999999999 69999999999998876543 223333321


Q ss_pred             c----hh-hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          297 I----HD-ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       297 ~----~~-~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                      .    .. ..+.+.+|++++.++++.++++.+.+++|++++.+++.++++++++.|++ .|+.++. .+..+++++++|.
T Consensus       225 ~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~~~~~~~~~  302 (363)
T TIGR02326       225 DQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRA-LGFEPLL-DDEIQSPIITSFY  302 (363)
T ss_pred             HHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-cCCeecc-CcccCCceEEEEE
Confidence            1    11 12334568999999999999998876667999999999999999999987 6888763 3344677677788


Q ss_pred             cCCC-chh-HHHHHHHHHcCCeecCCCCC-CCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          372 LEKS-DLE-AEFVKEAAKEKMVQLKGHRS-VGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       372 ~~~~-~~~-~~~~~~L~~~Gi~~~~g~~~-~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +++. ..+ .++.+.|+++||.+.+|... .+++|||++++++.+|+++++++|++++.
T Consensus       303 ~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~  361 (363)
T TIGR02326       303 SPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY  361 (363)
T ss_pred             CCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence            8752 123 36888999999999887533 35799999999999999999999998764

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=100.00  E-value=3.7e-40  Score=329.74  Aligned_cols=341  Identities=20%  Similarity=0.252  Sum_probs=275.4

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      +.++|+|||.++++.|+++|.+.+             .+++++|.+.++++++.+++++|++++++++++++|+|++++.
T Consensus         5 ~~~~~~pgP~~~~~~~~~a~~~~~-------------~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~   71 (368)
T PRK13479          5 DPLLLTPGPLTTSRTVREAMLRDW-------------GSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEA   71 (368)
T ss_pred             CceeecCCCCCCCHHHHHHhCCCC-------------CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHH
Confidence            346899999999999999987642             3456778889999999999999997644556567999999999


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCccEEEEeecCCCcccc
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICANETIHGVE  224 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~~~t~tG~~  224 (430)
                      ++.++..+||++++..+++|+.+|...+++.| +++.++...    +..+|+++++  ++  +++++|.++|++|+||.+
T Consensus        72 ~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~----~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~  147 (368)
T PRK13479         72 AIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGE----DEPPDAAEVEAALAADPRITHVALVHCETTTGIL  147 (368)
T ss_pred             HHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCC----CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccc
Confidence            99999989999999889999887767778888 888888742    2247888876  43  567889999999999999


Q ss_pred             CC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC-CCccccccc
Q 043610          225 FK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK-TPLMLDYKI  297 (430)
Q Consensus       225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~-~p~~~~~~~  297 (430)
                      +|  +|.++ +++|+++++|++|++|..++|+.++  |++++++|||+ ||+|+|++++++++++.+... .++++++..
T Consensus       148 ~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~  227 (368)
T PRK13479        148 NPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYD  227 (368)
T ss_pred             cCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHH
Confidence            99  78886 6889999999999999999998875  79999999998 799999999999998875542 333333221


Q ss_pred             h----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          298 H----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       298 ~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                      .    .+.+.+.+|++++.++++.++++.+.+.+++++..+++.++++++++.|++ .|++++. .+..+++.+++|.++
T Consensus       228 ~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~~~~~~~~~~~  305 (368)
T PRK13479        228 QWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRA-LGFEPLL-DAEIQSPIIVTFHAP  305 (368)
T ss_pred             HHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-cCCcccC-CchhcCceEEEEECC
Confidence            1    112445569999999999999998876667999999999999999999987 6887653 334466677788876


Q ss_pred             CC-chh-HHHHHHHHHcCCeecCCCCC-CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          374 KS-DLE-AEFVKEAAKEKMVQLKGHRS-VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       374 ~~-~~~-~~~~~~L~~~Gi~~~~g~~~-~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .. ..+ .++.++|.++||.+.+|... .+.+|+|++.+++++|+++++++|++++++.
T Consensus       306 ~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~  364 (368)
T PRK13479        306 ADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM  364 (368)
T ss_pred             CCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence            42 123 37999999999999876432 3579999988999999999999999988754

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=100.00  E-value=3.5e-40  Score=334.17  Aligned_cols=345  Identities=16%  Similarity=0.133  Sum_probs=270.9

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~  147 (430)
                      +.+|+++++.+++|+.|++++.+++.+...+..+  ..++.+..+.+.++++|+.+++++|+. ++ +|+++ +|+|+++
T Consensus        23 ~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-~v~~t-~g~t~~l   98 (406)
T PRK09295         23 PLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHR--GIHTLSAQATEKMENVRKQAALFINARSAE-ELVFV-RGTTEGI   98 (406)
T ss_pred             ceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCC--cccHHHHHHHHHHHHHHHHHHHHcCcCCCC-eEEEe-CCHHHHH
Confidence            4699999999999999999999988654332211  123345678899999999999999984 44 77775 7899999


Q ss_pred             HHHHhh----cCCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          148 AAVPLN----LCTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       148 ~~~~~s----l~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      +.++.+    ++++||+|++...++.+.  .|...+++.| +++.++...   .+ .+|+++++  +++++++|+++|++
T Consensus        99 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~---~~-~~d~~~l~~~i~~~t~lv~l~~~~  174 (406)
T PRK09295         99 NLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP---DG-TLQLETLPALFDERTRLLAITHVS  174 (406)
T ss_pred             HHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC---CC-CCCHHHHHHhcCCCcEEEEEecch
Confidence            998876    357899999887776553  4556667778 888887643   23 46888887  78899999999999


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc-
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM-  292 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~-  292 (430)
                      |+||.++|  +|.++ +++|+++++|++|++|..++|++++  |++++|+||++||+|+|++++++++++.+.+..-+. 
T Consensus       175 n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~  254 (406)
T PRK09295        175 NVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGS  254 (406)
T ss_pred             hcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHhhCCCcccCCc
Confidence            99999999  78886 7889999999999999999999765  799999999889999999999999887654311100 


Q ss_pred             ----cc------ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          293 ----LD------YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       293 ----~~------~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                          .+      +.... .+...||+|+.+++++.+|++++.+ .|++.+.+|+++++++++++|.+..|++++.  +..
T Consensus       255 ~~~~~~~~~~~~~~~~~-~r~e~GT~~~~~~~~l~~al~~~~~-~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~--~~~  330 (406)
T PRK09295        255 MIATVSLTEGTTWAKAP-WRFEAGTPNTGGIIGLGAALDYVSA-LGLNNIAEYEQNLMHYALSQLESVPDLTLYG--PQN  330 (406)
T ss_pred             eeeeeecCCccccCCch-hhcCCCCccHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC--CCC
Confidence                00      00000 1234589999999999999999875 5899999999999999999998866888764  223


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +. .+++|.+++. ...++.+.|.++||.+..|..          ..+.+|+|++.|||++|||+++++|+++.+
T Consensus       331 ~~-~iv~~~~~~~-~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~  403 (406)
T PRK09295        331 RL-GVIAFNLGKH-HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             Cc-eEEEEEECCc-CHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence            44 5788988752 233688889999998865531          135799999999999999999999998754

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=100.00  E-value=9.9e-40  Score=330.38  Aligned_cols=347  Identities=17%  Similarity=0.177  Sum_probs=272.9

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEeCcHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATTQ  146 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~~gaT~a  146 (430)
                      ++.+|+++++.+++|+.|++++++++.++.++...  ..+..+..+.+.++++|+.+++++|+ +++ +|+++ +|+|++
T Consensus        18 ~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-~i~~~-~~~t~~   93 (401)
T PRK10874         18 DAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHR--SQFAAAQRLTARYEAAREQVAQLLNAPDAK-NIVWT-RGTTES   93 (401)
T ss_pred             CceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCC--cccHHHHHHHHHHHHHHHHHHHHcCCCCCC-EEEEE-CCHHHH
Confidence            35799999999999999999999998776543211  01122467788999999999999999 554 77775 789999


Q ss_pred             HHHHHhhc----CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          147 FAAVPLNL----CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       147 ~~~~~~sl----~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      ++.++.++    +++||+|++...++++.  .|...+++.| +++.++...   .+ .+|+++++  ++++|++|+++|+
T Consensus        94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~---~~-~~d~~~l~~~i~~~t~lv~i~~~  169 (401)
T PRK10874         94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA---DR-LPDVDLLPELITPRTRILALGQM  169 (401)
T ss_pred             HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC---CC-cCCHHHHHHhcCcCcEEEEEeCC
Confidence            99999887    47899999988887763  4656667778 888887742   22 57888887  7899999999999


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc-
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL-  291 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~-  291 (430)
                      +|+||.++|  +|.++ +++|+++++|++|++|..++|+.++  |++++|+||++||+|+|++|+++++++.+.+.... 
T Consensus       170 ~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~  249 (401)
T PRK10874        170 SNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWQGGG  249 (401)
T ss_pred             cccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCccEEEEEchHHHhcCCCeecCC
Confidence            999999999  78886 7889999999999999999988765  79999999988999999999999998876432100 


Q ss_pred             -c---ccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          292 -M---LDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       292 -~---~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                       .   .++...    .......||+|+.+++++..|++++.+ .|.+.+.+++++++++++++|++.+|+.++. .+  .
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~-~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~-~~--~  325 (401)
T PRK10874        250 KMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLAD-IDINQAESWSRSLATLAEDALAKLPGFRSFR-CQ--D  325 (401)
T ss_pred             cceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC-CC--C
Confidence             0   001000    001223589999999999999998875 4899999999999999999999766887653 22  2


Q ss_pred             ccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          364 SFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      + .+++|.+++.. ..++.+.|.++||.+..|..          ..++||||++.|||++||++++++|+++++.
T Consensus       326 ~-~i~~~~~~~~~-~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~  398 (401)
T PRK10874        326 S-SLLAFDFAGVH-HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL  398 (401)
T ss_pred             C-cEEEEEECCcC-HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence            3 47788876422 23788899999999876541          1368999999999999999999999998763

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=100.00  E-value=1.6e-39  Score=331.15  Aligned_cols=350  Identities=18%  Similarity=0.172  Sum_probs=271.7

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +.+|+++++++++|+.|++++.+++.++..+..+.  .+..+..+.+.++++|+.+++++|++++++|+++ +|+|++++
T Consensus        32 ~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t-~g~t~al~  108 (424)
T PLN02855         32 KLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRG--IHALSAKATDAYELARKKVAAFINASTSREIVFT-RNATEAIN  108 (424)
T ss_pred             CeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCc--cchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe-CCHHHHHH
Confidence            46999999999999999999999887664432210  1222456778899999999999999643378876 78999999


Q ss_pred             HHHhhc----CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          149 AVPLNL----CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       149 ~~~~sl----~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      .++.++    +++||+|++...++.+.  .|...++..| +++.++...   .+ .+|+++++  +++++++|+++|++|
T Consensus       109 ~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~---~~-~~~~~~l~~~i~~~t~lv~i~~~~n  184 (424)
T PLN02855        109 LVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTP---DE-VLDVEQLKELLSEKTKLVATHHVSN  184 (424)
T ss_pred             HHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCC---CC-CcCHHHHHHHhccCceEEEEeCccc
Confidence            988763    57899999877666653  3555566778 888887643   22 36778887  788999999999999


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc---
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL---  291 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~---  291 (430)
                      +||.++|  +|.++ +++|+++++|++|++|..++|++++  |++++|+||++||+|+|++++++++++.+.+....   
T Consensus       185 ~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~p~~~g~~~  264 (424)
T PLN02855        185 VLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGFLWGKSDLLESMPPFLGGGEM  264 (424)
T ss_pred             cccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCccEEEEEchhhhhcCCCEecCCCc
Confidence            9999999  78886 7889999999999999999999875  79999999988999999999999998876432100   


Q ss_pred             ----cccccchh--hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC---CCC
Q 043610          292 ----MLDYKIHD--ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE---KSV  362 (430)
Q Consensus       292 ----~~~~~~~~--~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~---~~~  362 (430)
                          +.++....  ..+...||+++..++++.++++++.+ .|++++++|+.++++++++.|.+..|++++...   +..
T Consensus       265 ~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~-~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~  343 (424)
T PLN02855        265 ISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSE-IGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVG  343 (424)
T ss_pred             eeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccC
Confidence                00110000  11234689999999999999998875 599999999999999999999886688887422   224


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHc-CCeecCCC----------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGH----------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~----------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      |+ .+++|.+++.. ..++.+.|.++ ||.+..|.          ...+.+|||++.|||++||++++++|+++++.
T Consensus       344 r~-~~v~~~~~~~~-~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~  418 (424)
T PLN02855        344 RA-ALCAFNVEGIH-PTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAF  418 (424)
T ss_pred             cc-cEEEEEECCcC-HHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence            54 57888887421 23788899877 99876543          11247999999999999999999999998754

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=100.00  E-value=4.2e-39  Score=325.49  Aligned_cols=346  Identities=16%  Similarity=0.163  Sum_probs=270.4

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~  147 (430)
                      +.+|+++++.+++|+.|++++.+++..+.++...  ..+..+..+.+.++++|+.+++++|++ ++ +|+++ +|+|+++
T Consensus        16 ~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-~i~~t-~g~t~~l   91 (398)
T TIGR03392        16 GTVYLDSAATALKPQAVIDATQQFYRLSSGTVHR--SQHQQAQSLTARYELARQQVARFLNAPDAE-NIVWT-RGTTESI   91 (398)
T ss_pred             CeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCC--cccHHHHHHHHHHHHHHHHHHHHhCCCCCC-eEEEe-CChHHHH
Confidence            5699999999999999999999988655433211  112234567788999999999999995 44 77775 7899999


Q ss_pred             HHHHhhc----CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          148 AAVPLNL----CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       148 ~~~~~sl----~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      +.++.++    +++||+|++...++++.  .|...++..| +++.++...   .+ .+|+++++  +++++++|+++|++
T Consensus        92 ~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~---~~-~~~~~~l~~~i~~~t~lv~i~~~~  167 (398)
T TIGR03392        92 NLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA---DL-LPDIRQLPELLTPRTRILALGQMS  167 (398)
T ss_pred             HHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC---CC-CcCHHHHHHHhccCceEEEEECcc
Confidence            9999887    47899999887777663  3555567778 888887743   22 46788887  78899999999999


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc--
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL--  291 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~--  291 (430)
                      |+||.++|  +|.++ +++|+++++|++|++|..++++.++  |++++|+||++||+|+|++++++++++.+.+....  
T Consensus       168 n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~  247 (398)
T TIGR03392       168 NVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTELLEAMPPWQGGGK  247 (398)
T ss_pred             ccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCceEEEEEcHHHHhhCCCeecCCc
Confidence            99999999  78886 7899999999999999999888765  79999999988999999999999988776432100  


Q ss_pred             c---ccccchh----hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          292 M---LDYKIHD----ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       292 ~---~~~~~~~----~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +   .++....    ..+...||+|+.+++++.++++++.+ .|++++.+|+.+++++++++|.+.+|+.+.. .+  . 
T Consensus       248 ~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~-~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~-~~--~-  322 (398)
T TIGR03392       248 MLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTD-IDIAAAEAWSVSLADLAEERLAQLPGFRSFR-CP--G-  322 (398)
T ss_pred             eEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CC--C-
Confidence            0   0000000    01234589999999999999998874 5899999999999999999998766887653 11  2 


Q ss_pred             cceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          365 FMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+++|.+++. ...++.+.|.++||.+..|..          ..++||||+++|||++||++++++|+++++.
T Consensus       323 ~~i~~~~~~~~-~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~  395 (398)
T TIGR03392       323 SSLLAFDFAGV-HHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALEL  395 (398)
T ss_pred             CcEEEEEeCCc-CHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence            35788887642 123788899999999876541          1368999999999999999999999998764

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PLN02651 cysteine desulfurase

Probab=100.00  E-value=3.3e-39  Score=322.51  Aligned_cols=326  Identities=17%  Similarity=0.146  Sum_probs=254.6

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      +|++++|++++|+.|++++.+++.++++++.+.  .+..+..+.+.++++|+.+++++|++++ +++|+ +|+|++++.+
T Consensus         1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t-~~~t~a~~~~   76 (364)
T PLN02651          1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSR--THLYGWESEDAVEKARAQVAALIGADPK-EIIFT-SGATESNNLA   76 (364)
T ss_pred             CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChh--hhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHHHHH
Confidence            589999999999999999999886654433220  1223567888999999999999999875 77775 7899998877


Q ss_pred             Hhhc----CCCCCcEEEEeCChhH--HHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          151 PLNL----CTPNDPVDYIVTGSWG--DKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       151 ~~sl----~~~gd~vl~~~~g~~~--~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +.++    .++||+|++...++.+  ..|. ..++.| +++.++..+   .+ .+|+++++  +++++++|+++|++|+|
T Consensus        77 l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~~---~~-~~d~~~l~~~i~~~t~lv~v~~~~n~t  151 (364)
T PLN02651         77 IKGVMHFYKDKKKHVITTQTEHKCVLDSCR-HLQQEGFEVTYLPVKS---DG-LVDLDELAAAIRPDTALVSVMAVNNEI  151 (364)
T ss_pred             HHHHHHhccCCCCEEEEcccccHHHHHHHH-HHHhcCCEEEEEccCC---CC-cCCHHHHHHhcCCCcEEEEEECCCCCc
Confidence            6553    4689999887766655  3343 334567 777777642   23 57888887  78899999999999999


Q ss_pred             cccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcccccc
Q 043610          222 GVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYK  296 (430)
Q Consensus       222 G~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~  296 (430)
                      |.++|  +|.++ +++|++++||++|++|..|+|++++  |++++|+|||+||.|+|++|+++++++.+.+.   +..+.
T Consensus       152 G~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~---~~g~~  228 (364)
T PLN02651        152 GVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPL---MSGGG  228 (364)
T ss_pred             eecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCcc---ccCCC
Confidence            99999  78886 7899999999999999999999886  79999999998899999999999887765432   22211


Q ss_pred             chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCC-CCCCCccceEEEEcCC
Q 043610          297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPV-EKSVRSFMNVPFTLEK  374 (430)
Q Consensus       297 ~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~-~~~~rs~~iv~f~~~~  374 (430)
                        .+.+.+.||+|+.+++++.++|+++.+  +.+++.+|+++++++++++|.+ ..|++++.. ++..|.+++++|.+++
T Consensus       229 --~~~~~~~GT~~~~~~~~l~~al~~~~~--~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~  304 (364)
T PLN02651        229 --QERGRRSGTENTPLVVGLGAACELAMK--EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY  304 (364)
T ss_pred             --ccCCccCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC
Confidence              223446799999999999999999874  4699999999999999999985 358888753 3445667789999874


Q ss_pred             CchhH-HHHHHHHHcCCeecCCC------------------C---CCCeeEEeecCCCCHHHHH
Q 043610          375 SDLEA-EFVKEAAKEKMVQLKGH------------------R---SVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       375 ~~~~~-~~~~~L~~~Gi~~~~g~------------------~---~~g~iRis~~~~~t~edv~  416 (430)
                        .+. +++++|.+  |.+..|.                  .   ..|.+|+|++.|||++|||
T Consensus       305 --~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        305 --VEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             --CCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence              333 68888865  6654332                  0   1367999999999999985

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=100.00  E-value=2.2e-38  Score=318.23  Aligned_cols=338  Identities=16%  Similarity=0.141  Sum_probs=262.4

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      +|+++++.+++|+.|++++.+++.++.+++.+   .+++++.+.+.++++|+.+++++|++++ +|+++ +|+|++++.+
T Consensus         1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t-~~~t~a~~~a   75 (379)
T TIGR03402         1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSS---MHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFT-SGGTESDNTA   75 (379)
T ss_pred             CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCc---ccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CcHHHHHHHH
Confidence            58999999999999999999988765444332   3445678889999999999999999875 77775 7899999998


Q ss_pred             HhhcC---CCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          151 PLNLC---TPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       151 ~~sl~---~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      +.++.   .+||+|++....+.+.. .....++.| +++.++...   .+ .+|+++++  +++++++|++++++|+||.
T Consensus        76 l~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~---~g-~~~~~~l~~~i~~~~~lv~i~~~~n~tG~  151 (379)
T TIGR03402        76 IKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE---EG-RLDLEELRAAITDDTALVSVMWANNETGT  151 (379)
T ss_pred             HHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC---CC-cCCHHHHHHhcCCCcEEEEEEcccCCeee
Confidence            88763   34667665555555432 223344567 777777642   23 47888887  7889999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccch
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIH  298 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~  298 (430)
                      ++|  +|.++ +++|+++++|++|++|..|+|++++  |++++|+||++||.|+|++|++++..  .   .|.+.+.  .
T Consensus       152 ~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~~--~---~p~~~g~--~  224 (379)
T TIGR03402       152 IFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTR--F---RPLLRGG--H  224 (379)
T ss_pred             cccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCceEEEEECCCCC--C---CCcccCC--c
Confidence            999  78886 7899999999999999999999865  79999999977999999999987641  2   2322211  1


Q ss_pred             hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCCCCCCccceEEEEcCCCch
Q 043610          299 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVEKSVRSFMNVPFTLEKSDL  377 (430)
Q Consensus       299 ~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~~~~rs~~iv~f~~~~~~~  377 (430)
                      .+...+.||+|+.+++++.++++++.+  +++.+.+++++++++++++|.+ ..|+.+.. ++..+.+++++|.++... 
T Consensus       225 ~~~~~~~gt~~~~~~~~l~~al~~~~~--~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-  300 (379)
T TIGR03402       225 QERGRRAGTENVPGIVGLGKAAELATE--HLEEENTRVRALRDRLEAGLLARIPDARLNG-DPTKRLPNTVNISFEYIE-  300 (379)
T ss_pred             cCCCcCCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeC-CCccCCCCEEEEEecCCC-
Confidence            123345689999999999999998864  6899999999999999999985 67887764 333355567777776422 


Q ss_pred             hHHHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          378 EAEFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       378 ~~~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..++++.|.++||.+..|..                     ..+.+|+|++.|||++||++++++|+++++.
T Consensus       301 ~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~  372 (379)
T TIGR03402       301 GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIAR  372 (379)
T ss_pred             HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence            23788899889999765421                     1357999999999999999999999998764

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=100.00  E-value=6.3e-38  Score=311.41  Aligned_cols=336  Identities=22%  Similarity=0.325  Sum_probs=267.1

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      .+|+|||+.+++.|++++...             .+|+.+.+.+.++++|+.+++++|+++++..+++++|+|+++..++
T Consensus         1 ~~~~p~p~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~   67 (355)
T TIGR03301         1 ILLTPGPLSTSATVRDAMLVD-------------WCHWDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATI   67 (355)
T ss_pred             CcCcCCCCCCCHHHHHHhhhh-------------ccCCCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHH
Confidence            368999999999999999873             3456677889999999999999999875433444588999999999


Q ss_pred             hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCccEEEEeecCCCccccCC
Q 043610          152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~~~t~tG~~~p  226 (430)
                      .+++.+||+++++.+++|+..+...++..| +++.++...    +..+|+++++  +.  +++++|+++|++|+||+++|
T Consensus        68 ~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~----~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~  143 (355)
T TIGR03301        68 GSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE----YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP  143 (355)
T ss_pred             HhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC----CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH
Confidence            999888999988888888865556677788 887777642    2347888877  43  56788999999999999999


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccC-CCCCccccccc--
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQ-DKTPLMLDYKI--  297 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~-~~~p~~~~~~~--  297 (430)
                        +|.++ +++|+++++|++|++|..+++++++  |++++|+|||+ ||+|+|++++++++++.+. ...++++++..  
T Consensus       144 ~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (355)
T TIGR03301       144 LEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQW  223 (355)
T ss_pred             HHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHH
Confidence              78886 6899999999999999999888765  78999999998 6999999999999988755 23344444321  


Q ss_pred             --hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC
Q 043610          298 --HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS  375 (430)
Q Consensus       298 --~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~  375 (430)
                        ....+.+.+|++...++++.++++.+.++++++++.++++++++++++.|++ .|++++. ++..++..++.|.+++.
T Consensus       224 ~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~-~g~~~~~-~~~~~~~~~~~~~~~~~  301 (355)
T TIGR03301       224 AYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRA-LGFQPLL-PERWQSPIIVSFLYPDD  301 (355)
T ss_pred             HHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH-cCCeeec-CCCCCCCcEEEEECCCC
Confidence              1122345679999999999999998876555999999999999999999986 6887653 33335555667777741


Q ss_pred             -chh-HHHHHHHHHcCCeecCCCCC-CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          376 -DLE-AEFVKEAAKEKMVQLKGHRS-VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       376 -~~~-~~~~~~L~~~Gi~~~~g~~~-~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       ..+ .++.++|.++||.+.++... .+++||+++++++++|+++++++|++++
T Consensus       302 ~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~  355 (355)
T TIGR03301       302 PDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL  355 (355)
T ss_pred             CcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence             123 37889999999999876532 2689999999999999999999998753

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=100.00  E-value=2e-37  Score=313.74  Aligned_cols=348  Identities=16%  Similarity=0.158  Sum_probs=268.7

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~  147 (430)
                      +.+|+++++.+++|+.|++++.+++.++.++..+.  .+..+..+.+.++++|+.+++++|++ ++ +++++ +|+|+++
T Consensus        18 ~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~ia~~~~~~~~~-~v~~~-~g~t~~l   93 (403)
T TIGR01979        18 PLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRG--IHTLSVRATEAYEAVREKVAKFINAASDE-EIVFT-RGTTESI   93 (403)
T ss_pred             ceEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCC--ccHHHHHHHHHHHHHHHHHHHHhCcCCCC-eEEEe-CCHHHHH
Confidence            45999999999999999999998886654332210  11124567788999999999999998 44 77775 7899999


Q ss_pred             HHHHhhc----CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          148 AAVPLNL----CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       148 ~~~~~sl----~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      +.++.++    +++||+|++....+.+.  .|...++..| +++.++..+   .+ .+++++++  +++++++|++++++
T Consensus        94 ~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~---~~-~~~~~~l~~~i~~~~~lv~~~~~~  169 (403)
T TIGR01979        94 NLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDD---DG-TLDLDDLEKLLTEKTKLVAITHVS  169 (403)
T ss_pred             HHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCC---CC-CCCHHHHHHHhccCCeEEEEEccc
Confidence            9888774    57899999877666553  3444555678 888887652   23 47788887  78899999999999


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc--
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL--  291 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~--  291 (430)
                      |+||.++|  +|.++ +++|+++++|++|++|..++|+.++  |++++|+||++||+|+|++++++++++.+.+....  
T Consensus       170 ~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~g~~  249 (403)
T TIGR01979       170 NVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQMPPFLGGGE  249 (403)
T ss_pred             ccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCCceEEEEchHHHhcCCCeecCCC
Confidence            99999999  78885 7899999999999999999998774  79999999999999999999999988765432110  


Q ss_pred             ---ccc-----ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-CCCC
Q 043610          292 ---MLD-----YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EKSV  362 (430)
Q Consensus       292 ---~~~-----~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~~~  362 (430)
                         ...     +.... .+...||+++..++++.++++++.+ .|++.+.+|+.+++++++++|.+..|++++.. ++..
T Consensus       250 ~~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~al~~al~~~~~-~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~  327 (403)
T TIGR01979       250 MIAEVSFEETTYNEAP-HKFEAGTPNIAGVIGLGAAIDYLEA-IGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAED  327 (403)
T ss_pred             ceeecccCccccCCCh-hhcCCCCccHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccc
Confidence               000     00000 1123479999999999999998874 58999999999999999999987668888742 2223


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCC----------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH----------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~----------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++ .+++|.+++.. ..++.+.|+++||.+..|.          +..+++|||++.|+|++||++++++|+++++.
T Consensus       328 ~~-~~v~~~~~~~~-~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~  401 (403)
T TIGR01979       328 RG-GIISFNVEGVH-PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKF  401 (403)
T ss_pred             cC-ceEEEEeCCcC-HHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence            44 57888887422 2378889999999886542          11457999999999999999999999998764

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=100.00  E-value=1.2e-37  Score=310.02  Aligned_cols=336  Identities=21%  Similarity=0.294  Sum_probs=265.2

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      +||++||.++|+.|++++.+.+            .+++++.+.+.++++++.+++++|++++ +++++++|+|+++..++
T Consensus         1 ~~~~~~~~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~~~~~~~~t~al~~~~   67 (356)
T cd06451           1 LLLIPGPSNVPPRVLKAMNRPM------------LGHRSPEFLALMDEILEGLRYVFQTENG-LTFLLSGSGTGAMEAAL   67 (356)
T ss_pred             CcccCCCcCCCHHHHHHhCCCc------------cCCCCHHHHHHHHHHHHHHHHHhcCCCC-CEEEEecCcHHHHHHHH
Confidence            4799999999999999996543            2456778888999999999999999654 34445688899999999


Q ss_pred             hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCccccCC-
Q 043610          152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVEFK-  226 (430)
Q Consensus       152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~~p-  226 (430)
                      .+++++||+|++...++++..|...++..| +++.++..+   .+ .+|+++++  +++ ++++|++++++|++|.+.| 
T Consensus        68 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~  143 (356)
T cd06451          68 SNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPW---GE-AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPL  143 (356)
T ss_pred             HHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCC---CC-CCCHHHHHHHHhccCCCEEEEeccCCCcccccCH
Confidence            999999999998887888755656677778 888887643   22 46788887  666 8999999999999999999 


Q ss_pred             -CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCC---CCCccccccch
Q 043610          227 -EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQD---KTPLMLDYKIH  298 (430)
Q Consensus       227 -ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~---~~p~~~~~~~~  298 (430)
                       +|.++ +++|+++++|++|++|..++++.++  |+++.++|||++ |.|+|++++++++++.+..   ...++++....
T Consensus       144 ~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (356)
T cd06451         144 EGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLL  223 (356)
T ss_pred             HHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHH
Confidence             78876 7899999999999999988887654  789999999996 8899999999998876542   22233322111


Q ss_pred             h----hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610          299 D----ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       299 ~----~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                      .    ......+|+++..++++.++++++.+ .|++.+.++.+++++++++.|.+ .|+++.. ++..++++++.+.+++
T Consensus       224 ~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~~~~~~~~~~~~  300 (356)
T cd06451         224 LKYWGEGYSYPHTPPVNLLYALREALDLILE-EGLENRWARHRRLAKALREGLEA-LGLKLLA-KPELRSPTVTAVLVPE  300 (356)
T ss_pred             HhhhcccCCCCCCChHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-cCCeecc-CcccCCCceEEEECCC
Confidence            0    11134578999999999999998875 58999999999999999999996 6888764 3344565555566654


Q ss_pred             CchhHHHHHHHHHc-CCeecCCCCC--CCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          375 SDLEAEFVKEAAKE-KMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       375 ~~~~~~~~~~L~~~-Gi~~~~g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .....+++++|.++ ||.+.+|...  .++||+|++.+++++||++++++|+++++
T Consensus       301 ~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~  356 (356)
T cd06451         301 GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK  356 (356)
T ss_pred             CCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence            22233799999988 9998776432  35899999999999999999999998763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=100.00  E-value=1.6e-36  Score=304.98  Aligned_cols=337  Identities=14%  Similarity=0.106  Sum_probs=258.1

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEeCcHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~~gaT~a~~~  149 (430)
                      +|+++++.+++++.|++++.+++.+..+++.+   .+.++......++++++.+++.+|+ +++ +|+++ +|+|++++.
T Consensus         1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~---~~~~~~~~~~~l~~a~~~~~~~~~~~~~~-~i~~t-~g~teal~~   75 (382)
T TIGR03403         1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNS---LHQFGTATHPAIAEALDKLYKGINARDLD-DIIIT-SCATESNNW   75 (382)
T ss_pred             CcccCcCCCCCCHHHHHHHHHHHHhcCcCCcc---ccHHHHHHHHHHHHHHHHHHHHcCcCCCC-eEEEe-CCHHHHHHH
Confidence            58999999999999999999998765444333   2233445567788888899888997 454 77775 789999999


Q ss_pred             HHhhcC-----CC-CCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          150 VPLNLC-----TP-NDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       150 ~~~sl~-----~~-gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      ++.++.     ++ +++|++....+.+.. ....++..| +++.++..+   .+ .+|+++++  +++++++|++++++|
T Consensus        76 ~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~---~g-~~d~~~l~~~i~~~t~lv~~~~~~n  151 (382)
T TIGR03403        76 VLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE---QG-TITAEQVREAITEKTALVSVMWANN  151 (382)
T ss_pred             HHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC---CC-CCCHHHHHHhcccCCeEEEEEcccC
Confidence            888752     45 467777665554432 223455678 888887743   23 46788886  788999999999999


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcccc
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~  294 (430)
                      +||.++|  +|.++ +++|+++++|++|++|..++|+.++  |++++|+|||+||+|+|+++++++.  .+   .|.+.+
T Consensus       152 ~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~--~~---~p~~~g  226 (382)
T TIGR03403       152 ETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGV--EL---TPLFHG  226 (382)
T ss_pred             CCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCceEEEEECCCC--CC---CCcccC
Confidence            9999999  78886 7899999999999999999998775  8999999999999999999999764  11   232211


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                      . . ...+.+.||+|...++++.++++++.+  +++.+.+|+++++++++++|.+..|++++. +...+.+.++.|.+++
T Consensus       227 ~-~-~~~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~  301 (382)
T TIGR03403       227 G-E-HMGGRRSGTLNVPYIVAMGEAMRLANE--YLDFEKSHVRRLRDRLEDALLELPDVFVVG-DREHRVPNTILISIKG  301 (382)
T ss_pred             C-C-CCCCcccCCcChHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhcCCCEEEEC-CCCCCcCCEEEEEeCC
Confidence            1 1 112345689999999999999998764  588999999999999999998767888764 2334666677788764


Q ss_pred             CchhH-HHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          375 SDLEA-EFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       375 ~~~~~-~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                        .+. ++...|.++||.+..|..                     ..+.||+|++++||++|||+++++|++++++
T Consensus       302 --~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~  375 (382)
T TIGR03403       302 --VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQR  375 (382)
T ss_pred             --CCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence              333 677789889999865420                     1246999999999999999999999988754

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK02948 cysteine desulfurase; Provisional

Probab=100.00  E-value=6.7e-37  Score=307.62  Aligned_cols=338  Identities=14%  Similarity=0.094  Sum_probs=259.3

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      +|+++++.+++|+.|++++.+++.++++++.+   .+..+..+.+.++++|+.+++++|++++ +|+++ +|+|+++..+
T Consensus         2 ~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~-~g~t~a~~~~   76 (381)
T PRK02948          2 IYLDYAATTPMSKEALQTYQKAASQYFGNESS---LHDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFT-SGGTESNYLA   76 (381)
T ss_pred             EeccCCCCCCCCHHHHHHHHHHHHhcCCCCcc---ccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CcHHHHHHHH
Confidence            79999999999999999999988765444332   2223566778999999999999999875 77765 7899999988


Q ss_pred             HhhcC----CCCCcEEEEeCChhHH-HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          151 PLNLC----TPNDPVDYIVTGSWGD-KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       151 ~~sl~----~~gd~vl~~~~g~~~~-~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      +.+++    ++||+|++....+.+. .....++..| ++..++..+   .+ .+|+++++  +.+++++|+++|++|+||
T Consensus        77 ~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~---~~-~~d~~~l~~~l~~~~~lv~~~~~~n~tG  152 (381)
T PRK02948         77 IQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK---SG-LIRLVDLERAITPDTVLASIQHANSEIG  152 (381)
T ss_pred             HHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC---CC-CCCHHHHHHhcCCCCEEEEEECCcCCcE
Confidence            87764    5688877655455543 2223455667 777777642   23 47888887  678899999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI  297 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~  297 (430)
                      .++|  +|.++ +++|+++++|++|++|..++|+.++  |++++|+||++||+|+|++++++++.  +.+..+   .  .
T Consensus       153 ~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~--~~~~~~---~--~  225 (381)
T PRK02948        153 TIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQVR--WKPVFP---G--T  225 (381)
T ss_pred             eehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCCC--CCCccc---C--C
Confidence            9999  78886 6889999999999999999998776  79999999999999999999988751  111111   0  0


Q ss_pred             hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC-CCCCccceEEEEcCCCc
Q 043610          298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE-KSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~-~~~rs~~iv~f~~~~~~  376 (430)
                      ....+..++|+|+++++++.++++.+.+  +++++++++++++++++++|++ .|+++.+.. ...+.+.++.|.+++..
T Consensus       226 ~~~~~~~~~t~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~-~~~~v~~~~~~~~~~~~i~~~~~~~~~  302 (381)
T PRK02948        226 THEKGFRPGTVNVPGIAAFLTAAENILK--NMQEESLRFKELRSYFLEQIQT-LPLPIEVEGHSTSCLPHIIGVTIKGIE  302 (381)
T ss_pred             CCCCCcCCCCccHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhc-CCCCEEEeCCCccCcCCEEEEEeCCCC
Confidence            0123345689999999999999998753  5889999999999999999997 576654322 33345556777776422


Q ss_pred             hhHHHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          377 LEAEFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       377 ~~~~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       ..++..+|.++||.+..|..                     ..+.+|||++.++|++|+++++++|++++++
T Consensus       303 -~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~  374 (381)
T PRK02948        303 -GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQ  374 (381)
T ss_pred             -HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence             23677788889999875431                     0247999999999999999999999998764

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=100.00  E-value=3.2e-36  Score=304.25  Aligned_cols=340  Identities=18%  Similarity=0.191  Sum_probs=260.7

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      .+|++++|++++|+.|++++.+++..+.....+   ..+.+..+.+.++++|+.+++++|++++ +|+++ +|+|++++.
T Consensus        18 ~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~ia~~~~~~~~-~v~~~-~~~t~~l~~   92 (397)
T TIGR01976        18 RVFFDNPAGTQIPQSVADAVSAALTRSNANRGG---AYESSRRADQVVDDAREAVADLLNADPP-EVVFG-ANATSLTFL   92 (397)
T ss_pred             eEEecCCccCCCCHHHHHHHHHHHHhcCCCCCC---CchHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEe-CCHHHHHHH
Confidence            599999999999999999999988654322111   1222345678899999999999999875 67765 789999887


Q ss_pred             HHhhc---CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          150 VPLNL---CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       150 ~~~sl---~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      ++.++   ++|||+|++...++++.  .|...++..| +++.++..++  .+ .+++++++  +++++++|+++|++|+|
T Consensus        93 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~--~~-~~~~~~l~~~i~~~~~lv~i~~~~n~t  169 (397)
T TIGR01976        93 LSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA--TG-ELHPDDLASLLSPRTRLVAVTAASNTL  169 (397)
T ss_pred             HHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc--CC-CcCHHHHHHhcCCCceEEEEeCCCCCC
Confidence            76665   57999999877777663  3545566778 8877776431  23 47788887  78899999999999999


Q ss_pred             cccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcccccc
Q 043610          222 GVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYK  296 (430)
Q Consensus       222 G~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~  296 (430)
                      |.++|  +|+++ +++|+++++|++|++|..++|+.++  |++++|+|||+||+ +|++++++++++.+.+....+ .+.
T Consensus       170 G~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~G~l~~~~~~~~~l~~~~~~~-~~~  247 (397)
T TIGR01976       170 GSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPH-MGILWGRPELLMNLPPYKLTF-SYD  247 (397)
T ss_pred             CccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCc-eEEEEEcHHHHhhCCCccccC-ccC
Confidence            99999  78886 7899999999999999888888765  78999999999975 799999999988765432211 122


Q ss_pred             chhhcCCCCCCccHHHHHHHHHHHHHHHHhc-------------CHHHHHHHHHHHHHHHHHHHHccCCceecCC-CCCC
Q 043610          297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELG-------------GLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EKSV  362 (430)
Q Consensus       297 ~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~-------------g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~~~  362 (430)
                      .... ....||+++..++++..+++++.+.+             +++.+.+|+.+++++++++|.+..+++++.. ++..
T Consensus       248 ~~~~-~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~  326 (397)
T TIGR01976       248 TGPE-RFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAA  326 (397)
T ss_pred             CCcc-hhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccC
Confidence            1111 23458999999999999999887542             2788899999999999999987445888652 2334


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCC-------------CCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH-------------RSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~-------------~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      +++ ++.|.+++. ...++.++|.++||.+..+.             ...+++|||+++++|++||++++++|
T Consensus       327 ~~~-~~~~~~~~~-~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       327 RVP-TVSFTVHGL-PPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             CCc-eEEEEeCCc-CHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence            554 567777642 12379999999999986541             12357999999999999999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=100.00  E-value=2.6e-36  Score=305.50  Aligned_cols=340  Identities=15%  Similarity=0.120  Sum_probs=252.7

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCC-CcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSH-RGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .++|+++++++++|+.|++++.+++..+++++.+   ..+ .+....+.++++|+.+++++|++++ +|+|+ +|+|+++
T Consensus         3 ~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~-~g~t~a~   77 (402)
T TIGR02006         3 LPIYLDYAATTPVDPRVAEKMMPYLTEKFGNPAS---RSHSFGWEAEEAVENARNQVAELIGADSR-EIVFT-SGATESN   77 (402)
T ss_pred             ccEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCCh---hhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHH
Confidence            3589999999999999999999888654333221   111 1233457899999999999999876 77775 7899999


Q ss_pred             HHHHhhc----CCCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          148 AAVPLNL----CTPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       148 ~~~~~sl----~~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      +.++.++    .++||+|++....+.+.. ....++..| +++.++..+   .+ .+|+++++  +++++++|++++++|
T Consensus        78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~---~~-~~d~~~l~~~l~~~~~lv~v~~~~n  153 (402)
T TIGR02006        78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS---NG-LIDLEELKAAIRDDTILVSIMHVNN  153 (402)
T ss_pred             HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC---CC-cCCHHHHHHhcCCCCEEEEEECCCc
Confidence            9887665    267898887666655432 223344567 777777642   23 47888886  788899999999999


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcccc
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~  294 (430)
                      +||.++|  +|.++ +++|+++++|++|++|..++|++++  |++++|+||++||+|+|+++++++....+.+.   ...
T Consensus       154 ~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~---~~g  230 (402)
T TIGR02006       154 EIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEAL---IHG  230 (402)
T ss_pred             CceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCce---ecC
Confidence            9999999  78886 7899999999999999999999875  79999999998999999999998765544321   111


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                      .  ..+.+...||+++..++++..+|+++.+  +++.+.+|+++++++++++|++..++++.. +...+.+.++.|.++.
T Consensus       231 ~--~~~~~~~~gt~~~~~~~al~~al~~~~~--~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~-~~~~~~p~~~~v~f~~  305 (402)
T TIGR02006       231 G--GHERGMRSGTLPTHQIVGMGEAFRIAKE--EMAQDTAHVLALRDRLLNGIKSIEEVYLNG-DLEHRVPGNLNVSFNY  305 (402)
T ss_pred             C--CccCCccCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhcCCCEEEeC-CccccCCCeEEEEEeC
Confidence            1  1122345689999999999999998863  689999999999999999998766777664 2334555443344432


Q ss_pred             CchhHHHHHHHHHcCCeecCC------CC---------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          375 SDLEAEFVKEAAKEKMVQLKG------HR---------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       375 ~~~~~~~~~~L~~~Gi~~~~g------~~---------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .. ..++...|  +++.+..|      +.               ..+.||+|++.|||++|||+++++|+++++.
T Consensus       306 ~~-~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~  377 (402)
T TIGR02006       306 VE-GESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDK  377 (402)
T ss_pred             cC-HHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence            11 12455555  35443221      10               1367999999999999999999999998753

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=100.00  E-value=5.3e-36  Score=291.37  Aligned_cols=345  Identities=16%  Similarity=0.108  Sum_probs=250.6

Q ss_pred             cCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           65 SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        65 ~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ..+.+.+|++....+|.++.|+++|+.++..+++++.+.    .++.+.+..++++|+.+|+++|+++. +|+|+ +|||
T Consensus        39 ~~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~----~y~w~~~~~~E~aR~~VAklInAd~~-dIiFt-s~AT  112 (428)
T KOG1549|consen   39 HHGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR----SYGWKAEDAVEAAREQVAKLINADPS-DIVFT-SGAT  112 (428)
T ss_pred             cCCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc----ccchhhhHHHHHHHHHHHHHhCCCCC-cEEEe-CCch
Confidence            344567999999999999999999999998877777653    23456667799999999999999987 67775 8999


Q ss_pred             HHHHHHHhhcC-CCCC----cEEEEeCChhHH-HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610          145 TQFAAVPLNLC-TPND----PVDYIVTGSWGD-KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC  215 (430)
Q Consensus       145 ~a~~~~~~sl~-~~gd----~vl~~~~g~~~~-~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~  215 (430)
                      |++++++.++. ..+|    +|+.+.+.|.+. .+.+..+..| +++++++..   .+ .+|.+.++  ++++|++|.+.
T Consensus       113 Es~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~---~~-~~d~~~~~~~i~~~T~lv~I~  188 (428)
T KOG1549|consen  113 ESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVED---SG-LVDISKLREAIRSKTRLVSIM  188 (428)
T ss_pred             HHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCc---cc-cccHHHHHHhcCCCceEEEEE
Confidence            99999999984 4555    788777666553 2445566678 888898852   23 57888876  89999999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCC
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTP  290 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p  290 (430)
                      |++|..|+++|  ||+.+ +++++.+++|++|++|.+++|++++  |++++++|||+||+|+|+||++++. .+++ ..|
T Consensus       189 ~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~~-~~~~-~~p  266 (428)
T KOG1549|consen  189 HVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRKR-PRLR-VEP  266 (428)
T ss_pred             ecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCcceEEEEccCC-Cccc-ccC
Confidence            99999999999  89975 7899999999999999999999998  7999999999999999999999821 1111 123


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVP  369 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~  369 (430)
                      .+.+  ..++.+.+.||.+.+.+.++..|.|+..+.  ......+...+...+..++... ....+....+ .+-+..+.
T Consensus       267 ~~~G--Ggq~r~~rsGT~~~~~~~~~gsA~e~~~~~--~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~-~~~~~~~~  341 (428)
T KOG1549|consen  267 PLSG--GGQERGLRSGTVATPLAVGLGSAAEFVNKE--MAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGK-SRYPGLVS  341 (428)
T ss_pred             cccC--CccccccccCCcCchhhhhhHHHHHHHHhh--cchhHHHHHHHHHHHHHHHhhhCchhhccCCcc-ccccccee
Confidence            2222  124456778999999999999999988753  3444455555666666666432 2333443233 33344455


Q ss_pred             EEcCCC-chhHHHHHHHHH----cCCee-----cC-------CC---CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          370 FTLEKS-DLEAEFVKEAAK----EKMVQ-----LK-------GH---RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       370 f~~~~~-~~~~~~~~~L~~----~Gi~~-----~~-------g~---~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      |.++-. +.  .+...+++    -|..+     .+       |.   ....++|||++.|++++|++++++.+++.+..
T Consensus       342 ~~~~~~~g~--~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~  418 (428)
T KOG1549|consen  342 LSFPYVEGE--SLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSL  418 (428)
T ss_pred             eecccccCc--chhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHh
Confidence            665510 10  11111111    12111     11       21   11347999999999999999999999997653

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=100.00  E-value=2.4e-35  Score=295.58  Aligned_cols=341  Identities=16%  Similarity=0.152  Sum_probs=255.8

Q ss_pred             ceeecCCC-CCCcHHHHHHHHHHhhhccCC-CCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           71 VFNFAAGP-ANLPEKVLLKAQSELYNWRGS-GMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        71 ~~l~~~gp-~~~~~~V~~a~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +|+++++. .++|+.|++++.+.+.++.+. +.+   .+.........++++|+.+++++|+++.++|+++ +|+|++++
T Consensus         1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~-~g~t~al~   76 (376)
T TIGR01977         1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRG---RYRLALRASREVEETRQLLAKLFNAPSSAHVVFT-NNATTALN   76 (376)
T ss_pred             CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcc---cchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEe-CCHHHHHH
Confidence            47777764 478899999999888654321 111   0111223457788999999999999754367665 78999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      .++.+++++||+|++....+.+.  .|...++.+| +++.++...   .+ .+|+++++  +++++++|++++++|+||.
T Consensus        77 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~~~~~~~~v~~~~~~n~tG~  152 (376)
T TIGR01977        77 IALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN---EG-LISPERIKRAIKTNTKLIVVSHASNVTGT  152 (376)
T ss_pred             HHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC---CC-CcCHHHHHHhcCCCCeEEEEECCCCCccc
Confidence            99999889999999866555443  2444555668 777777642   23 46888886  7889999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCC-------
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTP-------  290 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p-------  290 (430)
                      ++|  +|.++ +++|+++++|++|++|..++|+.++  |++++++|||+ ||.|+|+++++++..  +.+...       
T Consensus       153 ~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~--~~~~~~~~~~~~~  230 (376)
T TIGR01977       153 ILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIK--LKPLKSGGTGSHS  230 (376)
T ss_pred             cCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCcC--cCceecCCCcccc
Confidence            999  78886 7899999999999999999998765  89999999999 699999999998752  111110       


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-CCCCCccceEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EKSVRSFMNVP  369 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~~~rs~~iv~  369 (430)
                      .+++.......+...+|+++..++++.++|+++.+ .|++.+.+|+++++++++++|.+..|++++.. ++..+. .+++
T Consensus       231 ~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~v~  308 (376)
T TIGR01977       231 ALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEK-IGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRV-GVVS  308 (376)
T ss_pred             ccccccccchhhccCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccC-CeEE
Confidence            11111100111233579999999999999999885 58999999999999999999997778887642 233344 5788


Q ss_pred             EEcCCCchhHHHHHHHHHc-CCeecCCC------------CCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          370 FTLEKSDLEAEFVKEAAKE-KMVQLKGH------------RSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       370 f~~~~~~~~~~~~~~L~~~-Gi~~~~g~------------~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      |.+++.. ..++.+.|.++ ||.+..|.            ...+.||||++.++|++||++++++|++
T Consensus       309 ~~~~~~~-~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       309 FTVEGID-SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             EEECCCC-HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            8887421 23788899877 99876543            1246799999999999999999999986

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>TIGR01814 kynureninase kynureninase

Probab=100.00  E-value=2.6e-35  Score=298.53  Aligned_cols=340  Identities=11%  Similarity=0.108  Sum_probs=243.7

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      ++.+|+++.+.+++|+.|.+++.+++..|...+..    ++..  ..+....++.++ + +++|++++ +|+|+ +|+|+
T Consensus        26 ~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-~v~~~-~~~t~   97 (406)
T TIGR01814        26 NAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIR----GHNTGKAPWFTLDESLLK-L-RLVGAKED-EVVVM-NTLTI   97 (406)
T ss_pred             CCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhc----cCccCCCChhhhhhhhcc-c-cccCCCCC-cEEEe-CCchH
Confidence            45688887777788999999999888766432211    1111  223333444444 5 89999876 78775 78999


Q ss_pred             HHHHHHhhcCCCC--CcEEEEeCChhHH---HHHHHHHHhC-Cc----eEEecCCCCcCCCCCCccccc--c---CCCcc
Q 043610          146 QFAAVPLNLCTPN--DPVDYIVTGSWGD---KAFKEAQKFC-NP----QVIWSGKAEKYTKIPNFDALE--Q---NPDAK  210 (430)
Q Consensus       146 a~~~~~~sl~~~g--d~vl~~~~g~~~~---~~~~~a~~~g-~~----~~v~~~~~~~~g~~~d~~~l~--i---~~~~~  210 (430)
                      +++.++.++++++  +.++++....|+.   .|...+++.| ++    ..++..   +.+ .+++++++  +   +++|+
T Consensus        98 ~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~---~~g-~~~~~~l~~~~~~~~~~t~  173 (406)
T TIGR01814        98 NLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPR---EEE-TLRLEDILDTIEKNGDDIA  173 (406)
T ss_pred             HHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccC---CCC-ccCHHHHHHHHHhcCCCeE
Confidence            9999999987664  3344455444432   2333455667 65    233332   123 35666665  3   58899


Q ss_pred             EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhc
Q 043610          211 YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGN  284 (430)
Q Consensus       211 lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~  284 (430)
                      +|+++|+++.||.++|  +|+++ +++|++++||++|++|..|+|++++  |++++|+|||+ ||+| |++|++++.++.
T Consensus       174 lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~  252 (406)
T TIGR01814       174 VILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHT  252 (406)
T ss_pred             EEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhh
Confidence            9999999999999999  78886 7899999999999999999999876  79999999999 6779 888887776554


Q ss_pred             cCCCCCcccc------cc-----chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC--
Q 043610          285 AQDKTPLMLD------YK-----IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN--  351 (430)
Q Consensus       285 ~~~~~p~~~~------~~-----~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~--  351 (430)
                      ..+..+.++.      +.     ...+.+...||||+.+++++.++|+++.+ .|++.+.+|..++.+++++.|.+..  
T Consensus       253 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~g~~~i~~~~~~l~~~l~~~l~~~~~~  331 (406)
T TIGR01814       253 ERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQ-AGMEALRKKSLLLTDYLEELIKARCGG  331 (406)
T ss_pred             cCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            4332221110      00     01122334689999999999999999874 5899999999999999999998642  


Q ss_pred             --CceecCC-CCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEee-cCCCCHHHHHHHHHHHHHHH
Q 043610          352 --GFYKCPV-EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASI-YNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       352 --G~~~~~~-~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~-~~~~t~edv~~ll~~L~~~~  426 (430)
                        |++++.. ++..++ .+++|.++ .. ..++.+.|.++||.+..  +..+.||||+ +.|||++||++++++|++++
T Consensus       332 ~~~~~i~~~~~~~~r~-~~v~~~~~-~~-~~~~~~~L~~~gi~v~~--~~~~~iRiS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       332 PPVLTIITPRDHAQRG-CQLSLTHP-VP-GKAVFQALIKRGVIGDK--REPSVIRVAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             CCceEEeCCCChhhcC-CeEEEEec-CC-HHHHHHHHHHCCEEEec--cCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence              4777642 223454 46788887 21 33788899999998753  2235799999 68999999999999999875

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PLN02724 Molybdenum cofactor sulfurase

Probab=100.00  E-value=6.7e-35  Score=316.94  Aligned_cols=350  Identities=16%  Similarity=0.145  Sum_probs=252.0

Q ss_pred             CCCCCceeecCCCCCCcHHHHHH-HHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEeCcH
Q 043610           66 GQEDRVFNFAAGPANLPEKVLLK-AQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE-YSVLFLQGGA  143 (430)
Q Consensus        66 ~~~~~~~l~~~gp~~~~~~V~~a-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~-~~vv~~~~ga  143 (430)
                      .....+|++++|.+++++.++++ +.+++.+..++..+   .+..+....+.++++|+.+++++|++++ ++|+|+ +|+
T Consensus        31 ~l~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s---~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFt-sna  106 (805)
T PLN02724         31 RLKGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHS---QSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFT-SGA  106 (805)
T ss_pred             hcCCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCc---CcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEe-CCh
Confidence            33447999999998877655554 44555444333332   2223566778899999999999999754 356665 789


Q ss_pred             HHHHHHHHhhc-CCCCCcEEEEeCChhHH-HHHHHHHHhC-CceEEecCCCC-----cCCCCCCc--cccc-c-------
Q 043610          144 TTQFAAVPLNL-CTPNDPVDYIVTGSWGD-KAFKEAQKFC-NPQVIWSGKAE-----KYTKIPNF--DALE-Q-------  205 (430)
Q Consensus       144 T~a~~~~~~sl-~~~gd~vl~~~~g~~~~-~~~~~a~~~g-~~~~v~~~~~~-----~~g~~~d~--~~l~-i-------  205 (430)
                      |++++.++.++ +++||+|++....|.+. .|.+.+++.| +++.++...+.     +.+ .++.  ++++ .       
T Consensus       107 T~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g-~~~~~~~~l~~~~~~~l~~  185 (805)
T PLN02724        107 TAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQG-SVVVKSRGLQRRNTSKLQK  185 (805)
T ss_pred             HHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhcccccccccc-ccccchhhhhhhhhhhhcc
Confidence            99999999888 68899998865555432 4556667778 88777664210     122 1222  3343 1       


Q ss_pred             ----CCCccEEEEeecCCCccccCC--CCccccC----C-----CcEEEEeccCcCCCCccccccc--cEEEeCCCcccc
Q 043610          206 ----NPDAKYLHICANETIHGVEFK--EYPSAKN----S-----TGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG  268 (430)
Q Consensus       206 ----~~~~~lv~i~~~~t~tG~~~p--ei~~~~~----~-----g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g  268 (430)
                          .+++++|+++|++|.||.++|  +|..+++    +     +++++||++|++|+.|+|++++  ||+++|+|||+|
T Consensus       186 ~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~G  265 (805)
T PLN02724        186 REDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFG  265 (805)
T ss_pred             ccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceecc
Confidence                256789999999999999999  4433422    1     3679999999999999999976  899999999997


Q ss_pred             -CCccEEEEEcHHHHhccCCCCCccccccc---------------hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610          269 -PSGVTIVIVRKDLLGNAQDKTPLMLDYKI---------------HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV  332 (430)
Q Consensus       269 -p~G~g~l~v~~~~~~~~~~~~p~~~~~~~---------------~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v  332 (430)
                       |.|+|+||+++++++.+.+.   ++++..               ....+...||+|+.+++++.++|+++.+ .|++++
T Consensus       266 gP~G~G~L~vr~~~~~~l~p~---~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~-ig~~~I  341 (805)
T PLN02724        266 YPTGLGALLVRRDAAKLLKKK---YFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNR-LTISAI  341 (805)
T ss_pred             CCCCceEEEEehhhhhhhcCC---ccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHH-hChHHH
Confidence             99999999999988765442   222110               0112345689999999999999999885 589999


Q ss_pred             HHHHHHHHHHHHHHHHccC------CceecCCC-----CCCCccceEEEEcCCCc---hhHHHHHHH-HHcCCeecCCCC
Q 043610          333 EKMNRKKAELLYNVIDGSN------GFYKCPVE-----KSVRSFMNVPFTLEKSD---LEAEFVKEA-AKEKMVQLKGHR  397 (430)
Q Consensus       333 ~~~~~~l~~~l~~~l~~~~------G~~~~~~~-----~~~rs~~iv~f~~~~~~---~~~~~~~~L-~~~Gi~~~~g~~  397 (430)
                      .+|..+|++++++.|.+..      +++++...     ...|.+ +++|.+.+..   .....+.+| .++||.+..|.-
T Consensus       342 ~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~-ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~  420 (805)
T PLN02724        342 AMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGP-IVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCF  420 (805)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccC-EEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccc
Confidence            9999999999999999754      46676422     123554 7889987521   333334444 667888643320


Q ss_pred             -------------------------------------CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          398 -------------------------------------SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       398 -------------------------------------~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                                                           ..|.+|+|++.|||++||++|+++|+++
T Consensus       421 Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~  485 (805)
T PLN02724        421 CNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS  485 (805)
T ss_pred             cCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence                                                 1267999999999999999999999984

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=100.00  E-value=1.6e-34  Score=289.47  Aligned_cols=340  Identities=16%  Similarity=0.171  Sum_probs=262.9

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      +|+++.|.+++|+.+++++++++.+++....+  ..+++++.+.+.++++++.+++++|+++..++++ ++|+|++++.+
T Consensus         1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~-~~g~t~a~~~~   77 (373)
T cd06453           1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHR--GVHELSARATDAYEAAREKVARFINAPSPDEIIF-TRNTTEAINLV   77 (373)
T ss_pred             CcccCccccCCCHHHHHHHHHHHHhcCCCCCC--CccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE-eCCHHHHHHHH
Confidence            48899999999999999999998776543211  1345567888999999999999999983226666 47899999999


Q ss_pred             HhhcCC---CCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          151 PLNLCT---PNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       151 ~~sl~~---~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      +.++..   +||+|++....+++.  .+...++..| +++.++...   .+ .+|+++++  +.+++++|+++|++|+||
T Consensus        78 ~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~v~~~~~~~~tG  153 (373)
T cd06453          78 AYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD---DG-QLDLEALEKLLTERTKLVAVTHVSNVLG  153 (373)
T ss_pred             HHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC---CC-CcCHHHHHHHhcCCceEEEEeCcccccC
Confidence            999876   899999877766663  2334455667 888887642   23 47888887  678999999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc------
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL------  291 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~------  291 (430)
                      .+.|  +|.++ +++|+++++|+++++|..++++.++  |++++|+|||++++|+|++++++++++.+.+....      
T Consensus       154 ~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~~~  233 (373)
T cd06453         154 TINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEE  233 (373)
T ss_pred             CcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcccc
Confidence            9999  78876 7899999999999999998888764  79999999999878999999999998876542210      


Q ss_pred             -cc---cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          292 -ML---DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       292 -~~---~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                       .+   .|.... .....+|++...++++..+++++.+ .|++++.+++.++++++++.|.+..|++++. ++..+. .+
T Consensus       234 ~~~~~~~~~~~~-~~~~~~t~~~~~~~al~~al~~l~~-~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~-~~  309 (373)
T cd06453         234 VSFEETTYADLP-HKFEAGTPNIAGAIGLGAAIDYLEK-IGMEAIAAHEHELTAYALERLSEIPGVRVYG-DAEDRA-GV  309 (373)
T ss_pred             ccccccccCCCc-cccCCCCCCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CccccC-Ce
Confidence             00   011000 1123479999999999999998875 5899999999999999999999855788763 222343 57


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      ++|.+++. ...++.+.|.++||.+..|..          ..+.+|||++.++|++|+|+++++|
T Consensus       310 ~~~~~~~~-~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         310 VSFNLEGI-HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             EEEEECCc-CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence            78887642 223789999999998765431          1457999999999999999999875

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=100.00  E-value=7.6e-33  Score=275.38  Aligned_cols=318  Identities=15%  Similarity=0.110  Sum_probs=236.4

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      |+++++.+++|+.|++++.+++.+.++++.+.  .+..+..+.+.++++|+.+++++|++++ +|+++ +|+|++++.++
T Consensus         1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~-~g~t~a~~~~l   76 (353)
T TIGR03235         1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSR--THEFGHNAKKAVERARKQVAEALGADTE-EVIFT-SGATESNNLAI   76 (353)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCch--hhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CCHHHHHHHHH
Confidence            67888889999999999999886543322210  1112345567899999999999999876 77765 78999999988


Q ss_pred             hhcC----CCC-CcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          152 LNLC----TPN-DPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       152 ~sl~----~~g-d~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      .++.    ++| ++|++....+.+.  .| ..++..| +++.++..+   .+ .+|+++++  +++++++|+++|++|+|
T Consensus        77 ~~l~~~~~~~g~~~vi~~~~~~~s~~~~~-~~~~~~G~~v~~v~~~~---~~-~~d~~~l~~~l~~~~~lv~~~~~~n~t  151 (353)
T TIGR03235        77 LGLARAGEQKGKKHIITSAIEHPAVLEPI-RALERNGFTVTYLPVDE---SG-RIDVDELADAIRPDTLLVSIMHVNNET  151 (353)
T ss_pred             HHHHHhcccCCCCeeeEcccccHHHHHHH-HHHHhcCCEEEEEccCC---CC-cCCHHHHHHhCCCCCEEEEEEcccCCc
Confidence            8774    355 5565544444332  23 2344567 777777642   23 47888887  67889999999999999


Q ss_pred             cccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcccccc
Q 043610          222 GVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYK  296 (430)
Q Consensus       222 G~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~  296 (430)
                      |.++|  +|.++ +++|+++++|++|++|..++|++++  |++++++|||+||+|+|+++++++.++... ..|.+++..
T Consensus       152 G~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~-~~~~~~~~~  230 (353)
T TIGR03235       152 GSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAP-LKPIMFGGG  230 (353)
T ss_pred             eeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCceEEEEEccCcccccc-cCceeeCCC
Confidence            99999  78886 7899999999999999999999865  899999999999999999999998654321 233333221


Q ss_pred             chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc
Q 043610          297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       297 ~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~  376 (430)
                        ...+...||+|+..++++.++++++.  .|++++.+|+++++++++++|.+ +|++++. ++..+.+.+++|.+++  
T Consensus       231 --~~~~~~~gt~~~~~~~al~~al~~~~--~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~-~~~~~~~~i~~~~~~~--  302 (353)
T TIGR03235       231 --QERGLRPGTLPVHLIVGMGEAAEIAR--RNAQAWEVKLRAMRNQLRDALQT-LGVKLNG-DPAETIPHILNFSIDG--  302 (353)
T ss_pred             --CcCccccCCCChHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhcc-CCeEEeC-CcccccCCEEEEEeCC--
Confidence              12334568999999999999999875  38999999999999999999987 8998874 3334566788888774  


Q ss_pred             hhH-HHHHHHHHcCCeecCCCC------CCCeeEEeecC
Q 043610          377 LEA-EFVKEAAKEKMVQLKGHR------SVGGMRASIYN  408 (430)
Q Consensus       377 ~~~-~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~  408 (430)
                      .+. ++.+.|++ +|.+.+|..      ....+|.+++.
T Consensus       303 ~~~~~v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~~g~  340 (353)
T TIGR03235       303 VNSEALIVNLRA-DAAVSTGSACSSSKYEPSHVLQAMGL  340 (353)
T ss_pred             cCHHHHHHHHhC-CeEEEchhhcCCCCCCCCHHHHHcCC
Confidence            333 68888865 888766531      11246666654

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK14012 cysteine desulfurase; Provisional

Probab=100.00  E-value=4.6e-32  Score=274.64  Aligned_cols=338  Identities=15%  Similarity=0.116  Sum_probs=245.7

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhh--hccCCCCcccccCC-CcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELY--NWRGSGMSVMEMSH-RGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~--~~~~~g~s~~~~~~-~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ++|+++++++++|+.|++++.+++.  +..++..+   ..+ .+....+.++++|+.+++++|++++ +++++ +|+|++
T Consensus         4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-~v~~~-~g~t~a   78 (404)
T PRK14012          4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPAS---RSHRFGWQAEEAVDIARNQIADLIGADPR-EIVFT-SGATES   78 (404)
T ss_pred             eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCc---hhhHHHHHHHHHHHHHHHHHHHHcCcCcC-eEEEe-CCHHHH
Confidence            5899999999999999999999885  22222211   011 1112246788999999999999875 77775 789999


Q ss_pred             HHHHHhhc----CCCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          147 FAAVPLNL----CTPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       147 ~~~~~~sl----~~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      ++.++.++    .++||+|++....+.+.. .....++.| +++.++..+   .+ .+|+++++  +++++++|+++|++
T Consensus        79 l~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~---~g-~~d~~~l~~~i~~~t~lv~~~~~~  154 (404)
T PRK14012         79 DNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS---NG-IIDLEKLEAAMRDDTILVSIMHVN  154 (404)
T ss_pred             HHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC---CC-cCCHHHHHHhcCCCCEEEEEECcC
Confidence            99887765    378999887666554432 112334457 777776642   33 47888887  78899999999999


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccc
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLML  293 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~  293 (430)
                      |+||.++|  +|.++ +++|+++++|++|++|..++|+.++  |++++|+||.+||.|+|+++++++...+.   .|.+.
T Consensus       155 n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~---~~~~~  231 (404)
T PRK14012        155 NEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRL---EAQMH  231 (404)
T ss_pred             CCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCC---Cceec
Confidence            99999999  78886 7899999999999999999988765  79999999988999999999998764432   22222


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc--eEEEE
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM--NVPFT  371 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~--iv~f~  371 (430)
                      +..  ...+...||+++..+.++.++++.+..  +++.+.++.+++++++.+.|++..++.+.. +...+.+.  ++.|.
T Consensus       232 g~~--~~~~~~~gt~~~~~~~~l~~al~~~~~--~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~-~~~~~~~~~~~~~~~  306 (404)
T PRK14012        232 GGG--HERGMRSGTLPTHQIVGMGEAARIAKE--EMATENERIRALRDRLWNGIKDIEEVYLNG-DLEQRVPGNLNVSFN  306 (404)
T ss_pred             CCC--ccCCccCCCcCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCCCEEEeC-CccccCCCEEEEEEe
Confidence            211  112234589999999999999997753  678899999999999999998766776543 22223333  34455


Q ss_pred             cCCCchhHHHHHHHHHcCCe----ecCCC---------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          372 LEKSDLEAEFVKEAAKEKMV----QLKGH---------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~----~~~g~---------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +.+   ..++...|++.+|.    +.+.+               ...+.||+|++.++|++||++++++|+++++
T Consensus       307 ~~~---~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~  378 (404)
T PRK14012        307 YVE---GESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIG  378 (404)
T ss_pred             CcC---HHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence            432   12566666533222    11111               0135799999999999999999999999865

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.97  E-value=3e-28  Score=243.70  Aligned_cols=326  Identities=14%  Similarity=0.046  Sum_probs=236.2

Q ss_pred             ecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhh
Q 043610           74 FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN  153 (430)
Q Consensus        74 ~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~s  153 (430)
                      |+..-+++.+.+++++.+++....+...    .   .+.+.+..+++++.+++++|.+++ .+++ ++|+|+++..++..
T Consensus        25 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~la~~~g~~~~-~~~~-~~ggt~a~~~a~~~   95 (371)
T PRK13520         25 LSSMCTEPHPIARKAHEMFLETNLGDPG----L---FPGTAKLEEEAVEMLGELLHLPDA-YGYI-TSGGTEANIQAVRA   95 (371)
T ss_pred             eeeeecCchHHHHHHHHHHHhcCCCCcc----c---CccHHHHHHHHHHHHHHHhCCCCC-CeEE-ecCcHHHHHHHHHH
Confidence            4444566778889999888764221111    1   134566778999999999999865 5566 47899999887665


Q ss_pred             cC----CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC
Q 043610          154 LC----TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       154 l~----~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      +.    +++|+|++.+.++++  |.+.++..| +++.++..    ++..+|+++++  +++++++|++++++|+||.+.|
T Consensus        96 ~~~~~~~~~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~~----~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~  169 (371)
T PRK13520         96 ARNLAKAEKPNIVVPESAHFS--FDKAADMLGVELRRAPLD----DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP  169 (371)
T ss_pred             HHhhccCCCceEEecCcchHH--HHHHHHHcCceEEEecCC----CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC
Confidence            53    357889887777776  445666778 87777764    22357888887  7788888888999999999999


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCCc-------cccc--cccEEEeCCCcccc-CCccEEEEEc-HHHHhccCCCCCcc
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSKP-------VDVT--RFGVIYAGAQKNVG-PSGVTIVIVR-KDLLGNAQDKTPLM  292 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~~-------idl~--~~d~~~~s~~K~~g-p~G~g~l~v~-~~~~~~~~~~~p~~  292 (430)
                        +|.++ +++|++++||++|+.+..+       +++.  ..|++.+++|||.+ |.|+|+++++ +++++.+....|+.
T Consensus       170 l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~  249 (371)
T PRK13520        170 IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPYL  249 (371)
T ss_pred             HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccCccc
Confidence              78886 6899999999999866432       3433  34789999999984 7778887765 45666543222321


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                      . ..   ......||++...++++..+|+.+.+ .|++++.++..+++++++++|.+ .|++++. .+  .. .+++|.+
T Consensus       250 ~-~~---~~~~~~gt~~~~~~~~~~~al~~l~~-~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~--~~-~~v~~~~  319 (371)
T PRK13520        250 T-SK---KQATLTGTRSGAGVAATYAVMKYLGR-EGYRKVVERCMENTRWLAEELKE-RGFEPVI-EP--VL-NIVAFDD  319 (371)
T ss_pred             c-CC---CCcceEeeccChHHHHHHHHHhhhcH-hHHHHHHHHHHHHHHHHHHHHHh-CCCEEec-CC--Cc-eEEEEec
Confidence            1 10   01122467777788889999988764 47899999999999999999997 5887432 22  23 3566776


Q ss_pred             CCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          373 EKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       373 ~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++   ..++.++|.++||.+.... ..+++|||+++++|++||+++++.|+++++|
T Consensus       320 ~~---~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~t~edi~~~~~~l~~~~~~  371 (371)
T PRK13520        320 PN---PDEVREKLRERGWRVSVTR-CPEALRIVCMPHVTREHIENFLEDLKEVKKR  371 (371)
T ss_pred             CC---HHHHHHHHHHCCceeccCC-CCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence            52   2378889999999876432 2357999999999999999999999998764

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.96  E-value=2e-27  Score=239.26  Aligned_cols=339  Identities=15%  Similarity=0.077  Sum_probs=236.2

Q ss_pred             CCCCceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCC-cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           67 QEDRVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHR-GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        67 ~~~~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~-~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      .++..+|+.|  -.+|+++.++++++++...+. +.++   ..|+ +......++++|+.+++++|++   +++++ +|+
T Consensus        16 ~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~l~~~lA~~~g~~---~~~~~-~g~   87 (387)
T PRK09331         16 LEEEFINLDPIQRGGILTPEARKALIEYGDGYS-VCDY---CPGRLDQIKKPPIADFHEDLAEFLGMD---EARVT-HGA   87 (387)
T ss_pred             ccccccccChhhcCCCCCHHHHHHHHHHHhccC-CCcc---cccccccccChHHHHHHHHHHHHhCCC---cEEEe-CCH
Confidence            3444555555  337899999999999874332 1111   0121 2223346889999999999996   35665 789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-------CCccEEE
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-------PDAKYLH  213 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-------~~~~lv~  213 (430)
                      |+++.+++.+++++||+|++..+++++...  .++..| +++.++...+  ++..+|+++++  +.       +++++|+
T Consensus        88 t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~--~~~~~G~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~~lV~  163 (387)
T PRK09331         88 REGKFAVMHSLCKKGDYVVLDGLAHYTSYV--AAERAGLNVREVPKTGY--PEYKITPEAYAEKIEEVKEETGKPPALAL  163 (387)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCchHHHHH--HHHHcCCEEEEEeCccC--cCCCcCHHHHHHHHHHhhhccCCCCEEEE
Confidence            999999999999999999988777877542  355667 8777776211  22347888876  43       4799999


Q ss_pred             EeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCC
Q 043610          214 ICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQD  287 (430)
Q Consensus       214 i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~  287 (430)
                      ++|+++++|.+.|  +|.++ +++|+++++|++|++|..|++..++  |++++|+|||++ |.|+|++++++++++.+..
T Consensus       164 l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~  243 (387)
T PRK09331        164 LTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFR  243 (387)
T ss_pred             EECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhccc
Confidence            9999999999999  78886 7899999999999999999988776  799999999995 8899999999998887543


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..+.+ .... ..  ...++.+....+++..+++.+.+.  + ...++..+++++++++|.+..|++++. +.. .+..+
T Consensus       244 ~~~~~-~~~~-~~--~~~~~~~~~~~~~~~aal~~~~~~--~-~~~~~~~~~~~~l~~~L~~l~g~~~~~-~~~-~~~~i  314 (387)
T PRK09331        244 TSRKF-GVKE-VE--LLGCTLRGAPLVTLMASFPHVVER--V-KRWDEEVKKARWFVDELEKIEGFKQLG-EKP-RNHDL  314 (387)
T ss_pred             ccCCC-cccc-ee--eeceecCchHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHhcCCCEEEec-cCc-CcCCe
Confidence            22211 1100 00  011234434455556666655432  2 345666778889999999755998874 221 23345


Q ss_pred             EEEEcCCC-------chh-HHHHHHHHHcCCeecC-CCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          368 VPFTLEKS-------DLE-AEFVKEAAKEKMVQLK-GHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       368 v~f~~~~~-------~~~-~~~~~~L~~~Gi~~~~-g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      +.+..+..       ... .++.+.|.++||.... |.  ...+|++..+ ++++|+++++++|+++++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~--~~i~ri~~~g-~t~~di~~l~~aL~~i~~~~  382 (387)
T PRK09331        315 MKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGA--TKEFKLSTYG-LTWEQVEYVADAFKEIAEKY  382 (387)
T ss_pred             EEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCC--ceEEEEEecc-CCHHHHHHHHHHHHHHHHhc
Confidence            55665421       011 2588899999998432 22  2358888765 78999999999999987754

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.96  E-value=4.3e-28  Score=248.65  Aligned_cols=337  Identities=15%  Similarity=0.095  Sum_probs=238.9

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhcc--CCCCcccccCCCcHHHHHHHHH-HHHHHHHHhCCCCCcEEEEEe--C
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWR--GSGMSVMEMSHRGKEFKSIIEK-AESDLRALLNIPQEYSVLFLQ--G  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~--~~g~s~~~~~~~~~~~~~~~~~-~r~~la~l~g~~~~~~vv~~~--~  141 (430)
                      .+.+.+++.++-..+++.|++++...+.+.+  +++.+.   +..+.++.+.+++ +|+.++++||++++ ++.+..  +
T Consensus        32 ~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~---~~~g~~~~~~iE~~ar~~~a~lf~a~~~-~~~~~~~~~  107 (452)
T PTZ00094         32 RQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNR---YYGGNEVVDKIENLCQKRALEAFGLDPE-EWGVNVQPY  107 (452)
T ss_pred             HHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCcc---ccccchHHHHHHHHHHHHHHHHhCCCcc-cceeecCCC
Confidence            4467899999999999999999999987655  455443   3345566677774 89999999999865 544431  6


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHH----hC---CceEEecCCCCcCCCCCCccccc--cC-CCc
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQK----FC---NPQVIWSGKAEKYTKIPNFDALE--QN-PDA  209 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~----~g---~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~  209 (430)
                      ||++++..++.+++++||+|++....+-++.  |....+.    .+   ++..++..   ..| .+|+++++  +. .++
T Consensus       108 sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~---~~g-~id~~~L~~~l~~~~~  183 (452)
T PTZ00094        108 SGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN---EKG-LIDYDKLEELAKAFRP  183 (452)
T ss_pred             chHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC---CCC-CcCHHHHHHHHHHhCC
Confidence            7999999999999999999987554443332  1111101    11   11222222   134 57888887  43 367


Q ss_pred             cEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccc-----ccccEEEeCCCccc-cCCccEEEEEcHH
Q 043610          210 KYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDV-----TRFGVIYAGAQKNV-GPSGVTIVIVRKD  280 (430)
Q Consensus       210 ~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl-----~~~d~~~~s~~K~~-gp~G~g~l~v~~~  280 (430)
                      ++|+++  ++.+|+.+|  +|.++ +++|++++||++|++|.++.|+     ...|++++|+|||+ ||.| |+++++++
T Consensus       184 ~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~  260 (452)
T PTZ00094        184 KLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIFYRKK  260 (452)
T ss_pred             CEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEEEecc
Confidence            777664  456899999  78886 6899999999999999986654     34689999999999 7999 88888876


Q ss_pred             HHhccCCCC-CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          281 LLGNAQDKT-PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       281 ~~~~~~~~~-p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      ..+.+.+.. +..+       . ...|+++...++++.++|+++.. .+.+++.++..++++++.+.|.+ .|+.+....
T Consensus       261 ~~~~l~~~~~~~~~-------p-~~~G~~~~~~iaal~~al~~~~~-~~~~~~~~~i~~l~~~l~~~L~~-~g~~v~~~~  330 (452)
T PTZ00094        261 VKPDIENKINEAVF-------P-GLQGGPHNHQIAAIAVQLKEVQS-PEWKEYAKQVLKNAKALAAALEK-RGYDLVTGG  330 (452)
T ss_pred             cchHHHHhhccccC-------C-CCCCCchHHHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHh-CCcEEecCC
Confidence            544321110 0000       0 12478899999999999998863 47889999999999999999987 688876321


Q ss_pred             CCCCccceEEEEcCCCchhH-HHHHHHHHcCCeec-CCC------CCCCeeEEeecCCCC----HHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL-KGH------RSVGGMRASIYNAMP----LAGVEKLVAFMKDFQA  427 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~-~g~------~~~g~iRis~~~~~t----~edv~~ll~~L~~~~~  427 (430)
                      ...+. .++.|..+  +.+. ++...|.++||.+. .+.      ...++||+|++.+|+    ++||++++++|+++++
T Consensus       331 ~~~~~-~~v~~~~~--~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~  407 (452)
T PTZ00094        331 TDNHL-VLVDLRPF--GITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVK  407 (452)
T ss_pred             CCCce-EeecCCcC--CCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            11222 23344433  3344 67778888899974 221      124689999999887    9999999999999876

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.96  E-value=5e-27  Score=235.11  Aligned_cols=324  Identities=14%  Similarity=0.038  Sum_probs=226.6

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      .++++.++.+ .+.+.+++..++....  +..     ...+...+..+++++.+++++|++++ +++++ +|+++++..+
T Consensus        23 ~~~~~~~~~~-~~~~~~a~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~-~~~~~-~g~~~~~~~~   92 (373)
T TIGR03812        23 RILGSMCTNP-HPIAVKAYDMFIETNL--GDP-----GLFPGTKKIEEEVVGSLGNLLHLPDA-YGYIV-SGGTEANIQA   92 (373)
T ss_pred             cEEEEEeCCc-hHHHHHHHHHHhhcCC--CCc-----ccCccHHHHHHHHHHHHHHHhCCCCC-CeEEe-ccHHHHHHHH
Confidence            3566666643 3446777776654322  211     11134456778999999999999865 55665 6789998876


Q ss_pred             HhhcC------CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          151 PLNLC------TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       151 ~~sl~------~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +..+.      ++||+|++...++++  |...++..| +++.++..+   .+ .+|+++++  +++++..+++.+++|+|
T Consensus        93 ~~~~~~~~~~~~~g~~vl~~~~~h~~--~~~~~~~~G~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~vv~~~~~~~t  166 (373)
T TIGR03812        93 VRAAKNLAREEKRTPNIIVPESAHFS--FEKAAEMLGLELRYAPLDE---DY-TVDVKDVEDLIDDNTIGIVGIAGTTEL  166 (373)
T ss_pred             HHHHHHHHhccCCCcEEEECCcchHH--HHHHHHHcCCeEEEEeeCC---CC-CcCHHHHHHHHhhCcEEEEEECCCCCC
Confidence            65542      367889887777776  345566778 888887642   22 46788886  67777544544578999


Q ss_pred             cccCC--CCccc-cCCCcEEEEeccCcCCCC----------ccccc--cccEEEeCCCccc-cCCccEEEE-EcHHHHhc
Q 043610          222 GVEFK--EYPSA-KNSTGILVADMSSNFCSK----------PVDVT--RFGVIYAGAQKNV-GPSGVTIVI-VRKDLLGN  284 (430)
Q Consensus       222 G~~~p--ei~~~-~~~g~~lvvD~a~s~G~~----------~idl~--~~d~~~~s~~K~~-gp~G~g~l~-v~~~~~~~  284 (430)
                      |.+.|  +|.++ +++|+++++|++|+.+..          ++|+.  ..|++.+++|||. +|.|+|+++ .++++++.
T Consensus       167 G~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~  246 (373)
T TIGR03812       167 GQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKY  246 (373)
T ss_pred             CccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhh
Confidence            99999  78886 688999999999975532          34543  3478899999987 576676555 57777766


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +....|+... .   ......||++...+.++..+|+++.+ .|++.+.+++.+++++++++|++ .|+..+. .+  .+
T Consensus       247 l~~~~~~~~~-~---~~~~~~gt~~~~~~~~~~~~l~~l~~-~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~--~~  317 (373)
T TIGR03812       247 LSVDAPYLTV-K---KQATITGTRSGASAAATYAVIKYLGR-EGYRKIVAECMENTRYLVEELKK-IGFEPVI-EP--VL  317 (373)
T ss_pred             hcccCcccCC-C---CCcceEeechhHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHHh-CCCeEEc-CC--Cc
Confidence            5322232111 0   11123478888889999999998764 58899999999999999999997 5765432 21  23


Q ss_pred             cceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          365 FMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                       .+++|.+++   ..++.++|.++||.+.... ..+++|||+++++|++|+++++++|++
T Consensus       318 -~~v~~~~~~---~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~t~edid~l~~~L~~  372 (373)
T TIGR03812       318 -NIVAFEVDD---PEEVRKKLRDRGWYVSVTR-CPKALRIVVMPHVTREHIEEFLEDLKE  372 (373)
T ss_pred             -eEEEEEeCC---HHHHHHHHHHCCceeccCC-CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence             356677663   2368899999999876432 235799999999999999999999976

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.95  E-value=2.1e-26  Score=232.94  Aligned_cols=342  Identities=13%  Similarity=-0.013  Sum_probs=234.3

Q ss_pred             CCCCceeecCC--------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-C-CcEE
Q 043610           67 QEDRVFNFAAG--------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-Q-EYSV  136 (430)
Q Consensus        67 ~~~~~~l~~~g--------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~-~~~v  136 (430)
                      ....+|+++..        .+++.+.+.+.|...+....++..+       .+...++.+++++.+++++|.+ + + ++
T Consensus        31 ~~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s-------~~~~~~le~~~~~~la~llg~~~~~~-~~  102 (431)
T TIGR01788        31 IHDELSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDE-------YPQTAEIENRCVNMLADLWHAPAKDA-EA  102 (431)
T ss_pred             HHHHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCccc-------CccHHHHHHHHHHHHHHHhCCCCCCC-CC
Confidence            33456666666        6778888999998887532222211       2333488999999999999998 3 3 45


Q ss_pred             EE-EeCcHHHHHHHHHhhcC--------CCC-----CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcc
Q 043610          137 LF-LQGGATTQFAAVPLNLC--------TPN-----DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFD  201 (430)
Q Consensus       137 v~-~~~gaT~a~~~~~~sl~--------~~g-----d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~  201 (430)
                      .+ +|+||||+++.++.+..        ..|     .++++....|++  |.+.++..| +++.+++++   .+..+|++
T Consensus       103 ~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~s--v~ka~~~lg~~v~~i~~d~---~~~~vd~~  177 (431)
T TIGR01788       103 VGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVC--WEKFARYFDVELREVPMDP---GRYVIDPE  177 (431)
T ss_pred             eEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHH--HHHHHHHcCceeEEEecCC---CceeeCHH
Confidence            54 37899999998765532        111     234444444554  455666678 888888753   23357889


Q ss_pred             ccc--cCCCccEEEEeecCCCccccCC--CCccc-cCC------CcEEEEeccCc-------CCCCccccc--cccEEEe
Q 043610          202 ALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNS------TGILVADMSSN-------FCSKPVDVT--RFGVIYA  261 (430)
Q Consensus       202 ~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~------g~~lvvD~a~s-------~G~~~idl~--~~d~~~~  261 (430)
                      +|+  +++++.+|++++++|.||.+.|  +|+++ +++      |++++||++|+       .+..++|++  ..|.++.
T Consensus       178 ~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~  257 (431)
T TIGR01788       178 QVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINV  257 (431)
T ss_pred             HHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEE
Confidence            987  7889999999999999999999  88886 566      89999999999       455555553  3378999


Q ss_pred             CCCccc-cCCccEEEEEcHH--HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610          262 GAQKNV-GPSGVTIVIVRKD--LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK  338 (430)
Q Consensus       262 s~~K~~-gp~G~g~l~v~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~  338 (430)
                      ++|||+ ||.|+|+++++++  +.+.+.. .+.|++... .+ ....++.+.....++...|..+.. .|++++.+++.+
T Consensus       258 s~HK~~~~P~g~G~l~~r~~~~l~~~~~~-~~~yl~~~~-~~-~t~~~sR~g~~al~~w~~l~~lG~-~G~~~i~~~~~~  333 (431)
T TIGR01788       258 SGHKYGLVYPGVGWVIWRDEEALPEELIF-HVNYLGGDE-PT-FTLNFSRPANQVIAQYYNFLRLGR-EGYRKIMQNSLD  333 (431)
T ss_pred             CchhccCCCCCcEEEEEeChHHcchhhee-cccccCCCC-CC-cceecCchHHHHHHHHHHHHHhcH-HHHHHHHHHHHH
Confidence            999999 8999999999875  2122211 122332211 00 011123333233334445555543 489999999999


Q ss_pred             HHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC---chhH-HHHHHHHHcCCeecC---CCCCCC--eeEEeecCC
Q 043610          339 KAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS---DLEA-EFVKEAAKEKMVQLK---GHRSVG--GMRASIYNA  409 (430)
Q Consensus       339 l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~---~~~~-~~~~~L~~~Gi~~~~---g~~~~g--~iRis~~~~  409 (430)
                      +++++.+.|++..+++++.  +..+. .+++|++++.   +.+. ++.++|.++|+.+..   ...-.|  .+|+++.+.
T Consensus       334 la~~l~~~L~~~~~~el~~--~~~~~-~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~  410 (431)
T TIGR01788       334 VARYLAEEIAKLGPFEIIS--DGSGI-PLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREG  410 (431)
T ss_pred             HHHHHHHHHHhCCCEEEee--CCCCc-eEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCC
Confidence            9999999999876788873  21244 5799998741   2233 789999999987421   111112  599999999


Q ss_pred             CCHHHHHHHHHHHHHHHHh
Q 043610          410 MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       410 ~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+.+++|++.|++++..
T Consensus       411 ~~~~~~~~~~~~~~~~~~~  429 (431)
T TIGR01788       411 FSRDLAELLIEDIEAALAY  429 (431)
T ss_pred             CCHHHHHHHHHHHHHHHHh
Confidence            9999999999999988753

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.95  E-value=5.2e-26  Score=227.00  Aligned_cols=326  Identities=13%  Similarity=0.030  Sum_probs=225.2

Q ss_pred             CCCCcHHHHHHHHHHhhhccCCCCcccccCC-CcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           78 PANLPEKVLLKAQSELYNWRGSGMSVMEMSH-RGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        78 p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      +.++.+.+++++.++...+   +.+.. .++ .+......++++++.+++++|+  + +++++ +|+|+++..++.++++
T Consensus        10 ~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~l~~~la~~~g~--~-~i~~~-~g~t~al~~~l~~~~~   81 (361)
T cd06452          10 GGRLTPEARKALIEWGDGY---SVCDF-CRGRLDEIEKPPIKDFHHDLAEFLGM--D-EARVT-PGAREGKFAVMHSLCE   81 (361)
T ss_pred             CCCCCHHHHHHHHHHhccc---CCccc-cccccccccCchHHHHHHHHHHHcCC--c-eEEEe-CCHHHHHHHHHHHhcC
Confidence            4578889999998876432   22111 111 1222224677999999999999  3 67765 7899999999999999


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-------CCccEEEEeecCCCccccCC
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-------PDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-------~~~~lv~i~~~~t~tG~~~p  226 (430)
                      +||+|++...++++..  ..++..| +++.++...+  ....+|+++++  ++       +++++|+++|++|+||.+.|
T Consensus        82 ~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~  157 (361)
T cd06452          82 KGDWVVVDGLAHYTSY--VAAERAGLNVREVPNTGH--PEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD  157 (361)
T ss_pred             CCCEEEEcCCcchHHH--HHHHhcCCEEEEEecCCC--CCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc
Confidence            9999998777777754  3456678 8877876432  11247888776  43       47899999999999999999


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhh
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE  300 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~  300 (430)
                        +|.++ +++|+++++|++|++|..+++..++  |++++|+||+++ |.++|++++++++++.+..... +++...   
T Consensus       158 ~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~-~~~~~~---  233 (361)
T cd06452         158 AKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQ-MFKIKE---  233 (361)
T ss_pred             HHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhcccc-ccccce---
Confidence              78876 6889999999999999888877665  699999999996 6779999999999887644222 122111   


Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC-----
Q 043610          301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS-----  375 (430)
Q Consensus       301 ~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~-----  375 (430)
                      .....+|++...++++..+++.+.+  .++ ..++..+.+++++++|.+..|++++...+ . ...++.+..+..     
T Consensus       234 ~~~~~~~~~~~~~~~~~~al~~~~~--~~~-~~~~~~~~~~~l~~~L~~l~g~~v~~~~~-~-~~n~~~~~~~~~~~~~~  308 (361)
T cd06452         234 VELLGCTLRGAPLVTLMASFPHVKE--RVK-RWDEEVEKARWFVAELEKIEGIKQLGEKP-K-NHDLMFFETPSFDEIAK  308 (361)
T ss_pred             eeeeccccCchHHHHHHHHHHHHHH--HHH-HHHHHHHHHHHHHHHHhcCCCeEEECCCC-C-CCceEEEEcCCcchhhh
Confidence            0112245555566666677765432  133 33344455689999998755888763122 2 223455565420     


Q ss_pred             --ch-hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          376 --DL-EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       376 --~~-~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                        .. ..++.++|.++||..... ....++|+++.+ .+++|+++++++|+++.
T Consensus       309 ~~~~~~~~~~~~L~~~gI~~~~~-~~~~~~ri~~~g-~~~e~~~~l~~al~~~~  360 (361)
T cd06452         309 KHKRRGYFLYSELKKRGIHGIKP-GLTRYFKLSTYG-LTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             hccccchhHHHHHHHcCceEEcC-CCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence              01 115889999899985321 223479999955 58999999999999764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.95  E-value=7e-26  Score=226.82  Aligned_cols=327  Identities=14%  Similarity=0.049  Sum_probs=222.4

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN  158 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g  158 (430)
                      +.+++.+.+++.++..   +.+.|.+..++....+...+.+.++.+++++|+++   ++++ +|+++++..++.+++++|
T Consensus        18 g~~~~~~~~a~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~---~~i~-~g~~~a~~~~~~~l~~~g   90 (370)
T TIGR02539        18 GVLTEAARKALVEFGD---GYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDE---ARVT-HGAREGKFAVMHALCKEG   90 (370)
T ss_pred             CCCcHHHHHHHHHHhh---ccccccccccccccccchHHHHHHHHHHHHhCCCc---eEEE-CChHHHHHHHHHHhhCCC
Confidence            4577777777776542   33444332233334445567788888999999974   4454 789999999999999999


Q ss_pred             CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-------CCccEEEEeecCCCccccCC--
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-------PDAKYLHICANETIHGVEFK--  226 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-------~~~~lv~i~~~~t~tG~~~p--  226 (430)
                      |+|++....+++..  ..++..| +++.++..++.  +..+|+++++  +.       +++++|+++|++|++|.+.|  
T Consensus        91 d~Vl~~~~~h~s~~--~~~~~~g~~~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~  166 (370)
T TIGR02539        91 DWVVLDGLAHYTSY--VAAERAGLNVKEVPHTGHP--EYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAG  166 (370)
T ss_pred             CEEEECCcccHHHH--HHHHHcCCEEEEEecCCcc--cCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHH
Confidence            99987666777653  3456677 77777764221  1247888876  43       36889999999999999999  


Q ss_pred             CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcC
Q 043610          227 EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENN  302 (430)
Q Consensus       227 ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~  302 (430)
                      +|.++ +++|+++++|++|++|..+++..++  |+++.|+|||+| +.++||+++++++++.+..... ++++...   .
T Consensus       167 ~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~-~~~~~~~---~  242 (370)
T TIGR02539       167 KVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSR-YSPVKEV---E  242 (370)
T ss_pred             HHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhccccc-CCcccee---e
Confidence            78886 6889999999999999877666544  789999999997 4448999999999987654322 1122110   0


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc------
Q 043610          303 SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD------  376 (430)
Q Consensus       303 ~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~------  376 (430)
                      ...+|.......++..+++...+  .++...+. .+++++++++|.+ .|++++.+.+. .+ .++.+.++...      
T Consensus       243 ~~~~~~~~~~~~~~~~al~~~~~--~l~~~~~~-~~~~~~l~~~L~~-~g~~~~~~~~s-~t-~~v~~~~~~~~~~~~~~  316 (370)
T TIGR02539       243 LLGCTSRGAPIVTMMASFPHVVE--RVKRWDEE-VKKTRWFVAELED-IGFIQLGQKPK-EH-DLVKFETPGFHEIAQKH  316 (370)
T ss_pred             eecccccccHHHHHHHHHHHHHH--HHHHHHHH-HHHHHHHHHHHHh-CCcEEEccCCC-cC-ceEEEECCchhHHhhhh
Confidence            11234444455555666764332  23333333 3445689999997 78887532232 33 34556665311      


Q ss_pred             --hhHHHHHHHHHcCCe-ecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          377 --LEAEFVKEAAKEKMV-QLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       377 --~~~~~~~~L~~~Gi~-~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                        ....+.++|.++||. +.+|.  .+++|||++ ..+++|+++++++|++++++.
T Consensus       317 ~~~~~~~~~~L~e~GI~~ir~~~--~~~iRis~~-~~t~e~i~~l~~~L~~~~~~~  369 (370)
T TIGR02539       317 KRRGYFLYEELKKRGIHGIRSGQ--TKYFKLSVY-GLTKEQVEYVVDSFEEIVEEY  369 (370)
T ss_pred             ccccHHHHHHHHhCCCccccCCc--ceEEEEEec-CCCHHHHHHHHHHHHHHHHhc
Confidence              012588899999997 44432  347999985 459999999999999987653

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK02769 histidine decarboxylase; Provisional

Probab=99.95  E-value=6.3e-26  Score=226.48  Aligned_cols=326  Identities=14%  Similarity=0.052  Sum_probs=235.9

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEE-EEEeCcHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSV-LFLQGGATTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~v-v~~~~gaT~a~  147 (430)
                      ++.+.-.+.....+...++.+..++.+..++..+   .+..+....++.+++++.+++++|++++ ++ .++|+||||++
T Consensus        22 ~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~---~~~~g~~~~~~e~~~~~~~a~l~g~~~~-~~~G~~TsGgTean   97 (380)
T PRK02769         22 QYFNVGYPEAADFDYSALKRFFSFSINNCGDPYS---KSNYPLNSFDFERDVMNFFAELFKIPFN-ESWGYITNGGTEGN   97 (380)
T ss_pred             hhcccCCCchhhcCHHHHHHHHHhhhccCCCccc---cCCCCCChHHHHHHHHHHHHHHhCCCCC-CCCEEEecChHHHH
Confidence            3344444555556556677776665543333322   3333445677888999999999999864 32 33468999998


Q ss_pred             HHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCC---ccEEEEeecCC
Q 043610          148 AAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPD---AKYLHICANET  219 (430)
Q Consensus       148 ~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~---~~lv~i~~~~t  219 (430)
                      ...+...  ..++++|++....|++.  .+.++.+| +...|+..+   .| .+|+++|+  ++++   |.+|++++++|
T Consensus        98 ~~a~~~ar~~~~~~~ii~s~~~H~Sv--~ka~~~lg~~~~~V~~~~---~g-~id~~~L~~~i~~~~~~t~lvv~t~gtt  171 (380)
T PRK02769         98 LYGCYLARELFPDGTLYYSKDTHYSV--SKIARLLRIKSRVITSLP---NG-EIDYDDLISKIKENKNQPPIIFANIGTT  171 (380)
T ss_pred             HHHHHHHHHhCCCcEEEeCCCceehH--HHHHHHcCCCCceeccCC---CC-cCcHHHHHHHHHhCCCCcEEEEEEeCCC
Confidence            7655433  25677877766677764  34455667 777777642   44 47888886  5555   89999999999


Q ss_pred             CccccCC--CCccc-cCCC---cEEEEeccCcCCCCc-------ccccc-ccEEEeCCCcccc-CCccEEEEEcHHHHhc
Q 043610          220 IHGVEFK--EYPSA-KNST---GILVADMSSNFCSKP-------VDVTR-FGVIYAGAQKNVG-PSGVTIVIVRKDLLGN  284 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g---~~lvvD~a~s~G~~~-------idl~~-~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~  284 (430)
                      .+|.+.|  +|+++ +++|   ++++||++|+.+.+|       +|+.. .|++++++|||+| |.|+|+++++++.++.
T Consensus       172 ~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~  251 (380)
T PRK02769        172 MTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVER  251 (380)
T ss_pred             CCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhh
Confidence            9999999  88886 6777   699999999999885       66643 5899999999997 9999999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +.+.. .|++.    ......||+|...++++..+|+++.. .|++++.++..+++++++++|++ .|++++. +|  .+
T Consensus       252 ~~~~~-~yl~~----~d~t~~GSR~g~~~l~lw~aL~~lg~-~G~~~~~~~~~~la~~l~~~L~~-~g~~~~~-~p--~~  321 (380)
T PRK02769        252 ISVDV-DYIGS----RDQTISGSRNGHTALLLWAAIRSLGS-KGLRQRVQHCLDMAQYAVDRLQA-NGIPAWR-NP--NS  321 (380)
T ss_pred             cccCc-cccCC----CCCCccCCCCcHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHh-CCCEEEc-CC--Cc
Confidence            54322 23221    11134589998899999999998875 58999999999999999999986 7888773 33  24


Q ss_pred             cceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          365 FMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       .+|+|..+.    .++.     +|+....-   .+.+||.++..++++.||+|++.|++..+
T Consensus       322 -~~v~f~~~~----~~~~-----~~w~l~~~---~~~~hi~~~~~~~~~~~~~f~~dl~~~~~  371 (380)
T PRK02769        322 -ITVVFPCPS----ERIW-----KKWHLATS---GNQAHIITMPHHNKQQIDSLIDELIFDLK  371 (380)
T ss_pred             -eEEEEcCCC----HHHH-----hCeeEccc---CCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence             467787553    2332     45433221   23799999999999999999999988764

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.94  E-value=3.5e-25  Score=222.23  Aligned_cols=333  Identities=15%  Similarity=0.174  Sum_probs=238.1

Q ss_pred             CCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT  144 (430)
                      .++++++.|..  +.|+.+++++.+.+.+... .   +..   .....++.+.+.+.+.+.+|.  +++.+|++ |.|++
T Consensus        28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~---Y~~---~~G~~~LReaia~~~~~~~~~~~~~~~eiiv-t~Ga~   99 (393)
T COG0436          28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-H---YTP---SAGIPELREAIAEKYKRRYGLDVDPEEEIIV-TAGAK   99 (393)
T ss_pred             CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-C---CCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE-eCCHH
Confidence            57899999874  8899999999998864211 1   111   223445566777888888774  44435776 47899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +|+..++++++.|||+|++.++++..+..  ..+..| +++.++..... .+..+|+++++  ++++||+|++++++|||
T Consensus       100 ~al~~~~~a~~~pGDeVlip~P~Y~~y~~--~~~~~gg~~v~v~l~~~~-~~f~~d~~~l~~~i~~ktk~i~ln~P~NPT  176 (393)
T COG0436         100 EALFLAFLALLNPGDEVLIPDPGYPSYEA--AVKLAGGKPVPVPLDEEE-NGFKPDLEDLEAAITPKTKAIILNSPNNPT  176 (393)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCCcCHHH--HHHhcCCEEEEEeCCcCc-cCCcCCHHHHHhhcCccceEEEEeCCCCCc
Confidence            99999999999999999999988877642  344556 88888874321 24468999997  78899999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCc---CCC-Ccc---cccc-cc--EEEeCCCccccCCc--cEEEEEc-HHHH
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSN---FCS-KPV---DVTR-FG--VIYAGAQKNVGPSG--VTIVIVR-KDLL  282 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s---~G~-~~i---dl~~-~d--~~~~s~~K~~gp~G--~g~l~v~-~~~~  282 (430)
                      |.+++  +   |.++ +++|++++.|++++   +.. .+.   .+.. .|  +.+.|++|.++++|  +||++++ ++++
T Consensus       177 Gav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~  256 (393)
T COG0436         177 GAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELI  256 (393)
T ss_pred             CcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHH
Confidence            99999  3   4444 58999999999865   222 121   2232 23  78899999999999  9999998 6676


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+.+.    .        .....+++.+.++++..||+.-.+...++..++.++++++.+++.|.+..|+.+.. .+. 
T Consensus       257 ~~~~~~----~--------~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~-~p~-  322 (393)
T COG0436         257 AALRKL----K--------SYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVK-PPE-  322 (393)
T ss_pred             HHHHHH----H--------HhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-CCC-
Confidence            654310    0        01224778899999999997431112456777889999999999999866787653 121 


Q ss_pred             CccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC--C---CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR--S---VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~--~---~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       ...-+...++....+.+|+.+| ++.||.+.+|..  .   .|++|+|+..  +++++++.++.|++++++.
T Consensus       323 -Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~--~~~~l~~a~~rl~~~~~~~  392 (393)
T COG0436         323 -GAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT--SEETLEEALRRLARFLAEY  392 (393)
T ss_pred             -eeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec--CHHHHHHHHHHHHHHHHhc
Confidence             2222334455322233799886 556999999753  2   3589999986  5599999999999987753

>PRK09105 putative aminotransferase; Provisional

Probab=99.94  E-value=9.2e-25  Score=218.63  Aligned_cols=305  Identities=13%  Similarity=0.086  Sum_probs=217.0

Q ss_pred             eecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHh
Q 043610           73 NFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPL  152 (430)
Q Consensus        73 l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~  152 (430)
                      +.+..|.++|+.+++++.+.+..          .+++.+.  . ..++|+.+++++|.+++ +|+++ +|+++++..++.
T Consensus        49 ~~~~~~~~~~~~~~~a~~~~~~~----------~~~Y~~~--~-~~~Lr~aia~~~~v~~e-~I~it-~Gs~~ai~~~~~  113 (370)
T PRK09105         49 NANECPLGPSPAARDAAARSAAL----------SGRYDLE--L-EDDLRTLFAAQEGLPAD-HVMAY-AGSSEPLNYAVL  113 (370)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHH----------hcCCCCc--h-HHHHHHHHHHHhCcChh-hEEEc-CChHHHHHHHHH
Confidence            34445567899999999877532          1122221  1 55788899999999886 77764 889999999999


Q ss_pred             hcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCccccCC--CC
Q 043610          153 NLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHGVEFK--EY  228 (430)
Q Consensus       153 sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei  228 (430)
                      .++++||+|++.++.++.+.  ..++..| +++.++..+  ++  .+|+++++ ..+++++|++++++||||.+++  ++
T Consensus       114 ~l~~~gd~Vli~~P~y~~~~--~~~~~~g~~~~~v~~~~--~~--~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l  187 (370)
T PRK09105        114 AFTSPTAGLVTADPTYEAGW--RAADAQGAPVAKVPLRA--DG--AHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADI  187 (370)
T ss_pred             HHcCCCCEEEEeCCChHHHH--HHHHHcCCeEEEecCCC--CC--CCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHH
Confidence            99999999998877665542  3566778 777777643  23  36777776 5567999999999999999999  55


Q ss_pred             ccc---cCCCcEEEEeccCc-CCCCc--cccccc--c-EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccc
Q 043610          229 PSA---KNSTGILVADMSSN-FCSKP--VDVTRF--G-VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKI  297 (430)
Q Consensus       229 ~~~---~~~g~~lvvD~a~s-~G~~~--idl~~~--d-~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~  297 (430)
                      .++   +++++++++|+++. ++..+  .++.+.  + +++.|++|.+|++|  +|+++.++++++.+.+.     .   
T Consensus       188 ~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-----~---  259 (370)
T PRK09105        188 EWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-----G---  259 (370)
T ss_pred             HHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-----C---
Confidence            553   35689999999873 43222  233222  3 67789999999999  99999999888765331     0   


Q ss_pred             hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch
Q 043610          298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL  377 (430)
Q Consensus       298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~  377 (430)
                             .+.++...+.++..+|+.   ...++..+++++++++++.+.|++ .|+.+.+  +  .+. .+.+.++.  .
T Consensus       260 -------~~~~~~~~~~aa~~~L~~---~~~~~~~~~~~~~~r~~l~~~L~~-~g~~~~~--~--~~~-f~~~~~~~--~  321 (370)
T PRK09105        260 -------HNPLPVPAAAAGLASLRD---PKLVPQRRAENAAVREDTIAWLKK-KGYKCTP--S--QAN-CFMVDVKR--P  321 (370)
T ss_pred             -------CCCcCHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHHH-CCCCcCC--C--CCc-EEEEeCCC--C
Confidence                   123566666766667753   124677788999999999999997 6776543  1  222 23344432  2


Q ss_pred             hHHHHHHHHHcCCeecCCCC-CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          378 EAEFVKEAAKEKMVQLKGHR-SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       378 ~~~~~~~L~~~Gi~~~~g~~-~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ..++.+.|.++||.+..+.. ..+++||+++   +++++++++++|+++.+
T Consensus       322 ~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~~  369 (370)
T PRK09105        322 AKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVMR  369 (370)
T ss_pred             HHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence            34799999889998732221 2468999988   68999999999998763

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.94  E-value=1.4e-24  Score=218.94  Aligned_cols=320  Identities=15%  Similarity=0.144  Sum_probs=224.1

Q ss_pred             CCCCceeecCCCC---CCcHHHHHHHHHHhhhc-cCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           67 QEDRVFNFAAGPA---NLPEKVLLKAQSELYNW-RGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        67 ~~~~~~l~~~gp~---~~~~~V~~a~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      ..+++++|+.|-.   +.++.+++++.+.+.++ .+.+.+.+   ..+  ......++++.+++++|.+   +++++ +|
T Consensus        36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~---~~G--~~~~~~~le~~ia~~~g~~---~~ii~-~~  106 (393)
T TIGR01822        36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRF---ICG--TQDIHKELEAKIAAFLGTE---DTILY-AS  106 (393)
T ss_pred             CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCc---ccC--ChHHHHHHHHHHHHHhCCC---cEEEE-Cc
Confidence            4456777777652   45789999999988764 23233321   112  1456678999999999985   34555 57


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----C--CccEEE
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----P--DAKYLH  213 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~--~~~lv~  213 (430)
                      +++|+..++.+++++||+|++....+.+..  ...+..+ +..  ..      . ..|+++++  ++    +  ++++|+
T Consensus       107 ~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~--~~~~~~~~~~~--~~------~-~~d~~~l~~~i~~~~~~~~~~~~v~  175 (393)
T TIGR01822       107 CFDANGGLFETLLGAEDAIISDALNHASII--DGVRLCKAKRY--RY------A-NNDMADLEAQLKEARAAGARHRLIA  175 (393)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEeccccHHHH--HHHHhcCCceE--Ee------C-CCCHHHHHHHHHhhhhcCCCceEEE
Confidence            899999999999999999998766665542  2233334 332  21      1 24666665  33    2  788999


Q ss_pred             EeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------cccc-cccEEEeCCCcccc-CCccEEEEEcH
Q 043610          214 ICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VDVT-RFGVIYAGAQKNVG-PSGVTIVIVRK  279 (430)
Q Consensus       214 i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------idl~-~~d~~~~s~~K~~g-p~G~g~l~v~~  279 (430)
                      +.++.|+||.+.|  +|.++ +++|+++++|++|++|...         .++. +.|++++|+||+++ +. .|+++.++
T Consensus       176 ~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r-~G~~~~~~  254 (393)
T TIGR01822       176 TDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGAS-GGFTTARK  254 (393)
T ss_pred             EeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCC-cEEEEeCH
Confidence            9999999999999  78886 6899999999999887642         2332 35799999999995 55 49999999


Q ss_pred             HHHhccCCC-CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610          280 DLLGNAQDK-TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV  358 (430)
Q Consensus       280 ~~~~~~~~~-~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~  358 (430)
                      ++++.+.+. .+..           ..+|.+...+.++.++++.+.   +.+.++++++++++++++.|.+ .|+.+.+ 
T Consensus       255 ~~~~~l~~~~~~~~-----------~~~~~~~~~~~a~~~al~~~~---~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-  318 (393)
T TIGR01822       255 EVVELLRQRSRPYL-----------FSNSLPPAVVGASIKVLEMLE---ASNELRDRLWANTRYFRERMEA-AGFDIKP-  318 (393)
T ss_pred             HHHHHHHHhCccce-----------ecCCCCHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH-cCCCCCC-
Confidence            888765331 1111           124566666677778887653   3578889999999999999986 5776542 


Q ss_pred             CCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       +  ..+ ++.+.+++.....+|.+.|.++||.+. +..      ....+|||++.+++++||+++++.|+++.++
T Consensus       319 -~--~~~-~~~i~~~~~~~~~~l~~~L~~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~  389 (393)
T TIGR01822       319 -A--DHP-IIPVMLYDAVLAQRFARRLLEEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE  389 (393)
T ss_pred             -C--CCC-EEEEEeCCHHHHHHHHHHHHHCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence             1  122 455555431122379999988998875 211      1236999999999999999999999998653

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.94  E-value=1.9e-24  Score=214.31  Aligned_cols=317  Identities=14%  Similarity=0.088  Sum_probs=217.2

Q ss_pred             ceeecCCC---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           71 VFNFAAGP---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        71 ~~l~~~gp---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      +++|+...   .+.++.|++++++++++|... .+.+..   ........+++++.+++++|+++  . +++ +++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~~~~~---~~~~~~~~~~l~~~la~~~~~~~--~-iv~-~sg~~a~   74 (349)
T cd06454           3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVG-AGGSRL---ISGTSDLHEELEEELAEFHGKEA--A-LVF-SSGYAAN   74 (349)
T ss_pred             ceecccCCccccCCCHHHHHHHHHHHHHhCCC-CCCcCe---ecCCchHHHHHHHHHHHHhCCCC--E-EEe-ccHHHHH
Confidence            44554432   233588999999999875322 111100   11234566789999999999863  3 444 5678899


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-----CCccEEEEeecCC
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-----PDAKYLHICANET  219 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-----~~~~lv~i~~~~t  219 (430)
                      .+++.+++++||+|++..+.+.+.  ...++..| ++..++.         .|.++++  +.     +++++|++++++|
T Consensus        75 ~~~~~~~~~~gd~Vl~~~~~~~~~--~~~~~~~g~~~~~~~~---------~~~~~le~~i~~~~~~~~~~~v~~~~~~~  143 (349)
T cd06454          75 DGVLSTLAGKGDLIISDSLNHASI--IDGIRLSGAKKRIFKH---------NDMEDLEKLLREARRPYGKKLIVTEGVYS  143 (349)
T ss_pred             HHHHHHhcCCCCEEEEehhhhHHH--HHHHHHcCCceEEecC---------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence            888888889999998765544432  23345567 6654432         2344444  22     4578899999999


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCc--------ccc--ccccEEEeCCCccccCCccEEEEEcHHHHhccC
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP--------VDV--TRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQ  286 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~--------idl--~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~  286 (430)
                      +||+..|  +|.++ +++|+++++|++|++|..+        ++.  ...|+++.|+||++|++| |+++.++++++.+.
T Consensus       144 ~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-G~i~~~~~~~~~~~  222 (349)
T cd06454         144 MDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG-GYIAGSKELIDYLR  222 (349)
T ss_pred             CCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC-CEEECCHHHHHHHH
Confidence            9999999  78886 6899999999999877543        222  233789999999999878 88888888876543


Q ss_pred             CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                      +....+          ...++++...++++.++|+++.+   .+.+.+++.++++++++.|.+ .|+.++. .+   ...
T Consensus       223 ~~~~~~----------~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~l~~-~g~~~~~-~~---~~~  284 (349)
T cd06454         223 SYARGF----------IFSTSLPPAVAAAALAALEVLQG---GPERRERLQENVRYLRRGLKE-LGFPVGG-SP---SHI  284 (349)
T ss_pred             Hhchhh----------hccCCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHh-cCCcccC-CC---CCc
Confidence            211100          11246677778888889987653   467889999999999999987 6776553 21   223


Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          367 NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       367 iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .+.+.+++.....++.+.|.++||.+.++..     ..+.+|++++.+++++|+++++++|+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         285 IPPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             EEEEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            3444444212223799999888999764211     1357999999999999999999999874

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.94  E-value=5.8e-25  Score=222.51  Aligned_cols=338  Identities=16%  Similarity=0.153  Sum_probs=229.6

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHH-HHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEK-AESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~-~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .+++.+++.+|+.++++.|++++.+++....+.|.+. .....+.++...+++ +++.+++++|++.. . +++ +|||+
T Consensus        17 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~-~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~-~-v~~-~sgt~   92 (402)
T cd00378          17 RQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPG-KRYYGGCEYVDEIEDLAIERAKKLFGAEYA-N-VQP-HSGSQ   92 (402)
T ss_pred             HHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCC-CcccCCchHHHHHHHHHHHHHHHHhCCCce-e-eec-CCcHH
Confidence            3467899999999999999999998764333222211 122224455555555 77888999999753 4 343 35789


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHH---HHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEEEEeecC
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAF---KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANE  218 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~---~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~  218 (430)
                      |+..++.++++|||+|++..+.+.++.+.   ..++..| ++..++...+ ..+..+|+++++  + .+++++|++++++
T Consensus        93 a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~id~~~l~~~i~~~~~~~v~~~~~~  171 (402)
T cd00378          93 ANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVD-PETGLIDYDALEKMALEFKPKLIVAGASA  171 (402)
T ss_pred             HHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcC-cccCCcCHHHHHHHHHhCCCCEEEecCcc
Confidence            99999999999999999877665443211   1133456 5666655332 112357888887  4 4689999988875


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccccEEEeCCCccc-cCCccEEEEEcH-HHHhccCCC
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRFGVIYAGAQKNV-GPSGVTIVIVRK-DLLGNAQDK  288 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~-~~~~~~~~~  288 (430)
                      +  |+..|  +|.++ +++|+++++|++|..|..     +.+++..|++++|+|||+ ||.| |+++.++ ++++.+...
T Consensus       172 ~--~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~~~  248 (402)
T cd00378         172 Y--PRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSA  248 (402)
T ss_pred             c--CCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCc-eEEEeccHHHHHHHHHH
Confidence            5  66667  78886 689999999999866542     334444589999999999 7887 6666654 777664321


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      ..           ....+++....+.++..++..+.+ .+.++..+++.++++++++.|.+ .|+.+.. .+ ..+ ..+
T Consensus       249 ~~-----------~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~-~~~-~~v  312 (402)
T cd00378         249 VF-----------PGLQGGPHLHVIAAKAVALKEALE-PEFKAYAKQVVENAKALAEALKE-RGFKVVS-GG-TDN-HLV  312 (402)
T ss_pred             hC-----------ccccCCchHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHh-CCCeEee-cC-CCC-eEE
Confidence            10           012245666667777777765543 25678889999999999999997 6887652 22 123 445


Q ss_pred             EEEcCCCchhH-HHHHHHHHcCCeecCC----CC----CCCeeEEeecCCC----CHHHHHHHHHHHHHHHHh
Q 043610          369 PFTLEKSDLEA-EFVKEAAKEKMVQLKG----HR----SVGGMRASIYNAM----PLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       369 ~f~~~~~~~~~-~~~~~L~~~Gi~~~~g----~~----~~g~iRis~~~~~----t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+++.+.+. ++.+.|.++||.+.+.    ..    ...++||+++..+    +++||+.+++.|+++++.
T Consensus       313 ~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~  385 (402)
T cd00378         313 LVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD  385 (402)
T ss_pred             EEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence            56776322233 5667788889998532    11    2247999987744    699999999999998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.94  E-value=1.3e-24  Score=219.63  Aligned_cols=301  Identities=12%  Similarity=0.050  Sum_probs=197.9

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCC--CCcEEEEeCChhHH--HHHHHHHHhC-CceE
Q 043610          111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTP--NDPVDYIVTGSWGD--KAFKEAQKFC-NPQV  185 (430)
Q Consensus       111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~--gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~  185 (430)
                      ....+.++++++.+++++|++.+ +++++.+|++.++.++...++.+  ||+|++....|.++  .|....++.| +++.
T Consensus        60 ~g~~~~~~~~~~~la~~~g~~~~-~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~  138 (398)
T cd00613          60 QGRLQALFELQTMLCELTGMDVA-NASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVE  138 (398)
T ss_pred             hhHHHHHHHHHHHHHHHHCCCcc-ceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEE
Confidence            45668889999999999999765 67776555555544544555555  99988765544333  2322223345 6666


Q ss_pred             EecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC---CCccc-cCCCcEEEEeccCcCCCCcccccc--cc
Q 043610          186 IWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK---EYPSA-KNSTGILVADMSSNFCSKPVDVTR--FG  257 (430)
Q Consensus       186 v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p---ei~~~-~~~g~~lvvD~a~s~G~~~idl~~--~d  257 (430)
                      ++...   .+ .+|+++++  +++++++|++++++ ++|.+.|   +|+++ +++|+++++|++|+.|..+.+..+  .|
T Consensus       139 v~~~~---~~-~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d  213 (398)
T cd00613         139 VPSDE---GG-TVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGAD  213 (398)
T ss_pred             eccCC---CC-CcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCC
Confidence            66532   22 46788887  78899999999975 7899987   56665 689999999999987776655544  47


Q ss_pred             EEEeCCCccccC-----CccEEEEEcHHHHhccCCCC-----------Cccccccch--h---hcCC-CCCCccHHHHHH
Q 043610          258 VIYAGAQKNVGP-----SGVTIVIVRKDLLGNAQDKT-----------PLMLDYKIH--D---ENNS-LYNTPPCYCIYM  315 (430)
Q Consensus       258 ~~~~s~~K~~gp-----~G~g~l~v~~~~~~~~~~~~-----------p~~~~~~~~--~---~~~~-~~~T~~~~~~~a  315 (430)
                      ++++|+|||++|     +|.|++++++++++.+.+..           ++++++...  .   +.+. ...+.+.....+
T Consensus       214 ~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~  293 (398)
T cd00613         214 IVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALM  293 (398)
T ss_pred             EEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHH
Confidence            999999999844     56899999998887643210           111111100  0   0010 012223334444


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC-chh-HHHHHHHHHcCCeec
Q 043610          316 CGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS-DLE-AEFVKEAAKEKMVQL  393 (430)
Q Consensus       316 ~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~-~~~-~~~~~~L~~~Gi~~~  393 (430)
                      +..+++.+.+ .|++++.+++++++++++++|++ .+....+ . ..+. ..+.|.++.. +.+ .++.+.|.++||.+.
T Consensus       294 a~~~l~~~~~-~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~-~~~~-~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~  368 (398)
T cd00613         294 AAMYIVYLGP-EGLKEIAERAHLNANYLAKRLKE-VGGVLPF-N-GPFF-HEFVLRLPPLYGIRAEDLAKALIDGGFHAP  368 (398)
T ss_pred             HHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHHh-cCCcccC-C-CCee-EEEEEEcCCcchHHHHHHHHhhhhcCcccc
Confidence            4455555543 47899999999999999999987 4433221 1 1223 2356777631 223 378999999998764


Q ss_pred             CCC-CCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          394 KGH-RSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       394 ~g~-~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      .-. ...+.+|+|++.++|++|||+++++|
T Consensus       369 ~~~~~~~~~lRis~~~~~t~edid~~~~~L  398 (398)
T cd00613         369 TMYLPVDGTLMIEPTETETKEELDALLEAL  398 (398)
T ss_pred             ccccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence            311 12357999999999999999999875

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.93  E-value=2e-24  Score=219.66  Aligned_cols=335  Identities=17%  Similarity=0.169  Sum_probs=224.9

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHH-HHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEK-AESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~-~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +++.+++.+++.++|+.|++++..++.+..+.|... .....+.++.+.+++ +++.+++++|++.+ .|+ + +|||++
T Consensus        24 ~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~~~~-~i~-~-~sgt~a   99 (416)
T PRK00011         24 QEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPG-KRYYGGCEYVDVVEQLAIDRAKELFGAEYA-NVQ-P-HSGSQA   99 (416)
T ss_pred             HhcCeeeecccCcCCHHHHHHHhchhhcccccCCCC-ccccccchHHHHHHHHHHHHHHHHhCCCce-eee-c-CCchHH
Confidence            466788999999999999999988764332222210 112223445556665 78899999999864 444 3 457899


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHH--HHH-HHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCC
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDK--AFK-EAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANET  219 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~-~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t  219 (430)
                      +..++.++++|||+|++....+.++.  +.. .....| +++.++...   ....+|+++++  ++ .++++|+++++  
T Consensus       100 l~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~i~~~~~k~v~~~~~--  174 (416)
T PRK00011        100 NAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE---ETGLIDYDEVEKLALEHKPKLIIAGAS--  174 (416)
T ss_pred             HHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc---ccCCcCHHHHHHHHHhcCCCEEEECCC--
Confidence            99999999999999998765543321  111 112234 555554432   11247888887  54 47999988754  


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccccEEEeCCCccc-cCCccEEEEEc-HHHHhccCCCC
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRFGVIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKT  289 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~d~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~  289 (430)
                      .+|...|  +|.++ +++|+++++|++|++|..     +.++...|++++|+|||+ ||.| |+++.+ +++++.+....
T Consensus       175 ~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~~  253 (416)
T PRK00011        175 AYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSAV  253 (416)
T ss_pred             cCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHHh
Confidence            4577777  78886 689999999999987653     445555589999999999 6887 777774 67776643211


Q ss_pred             CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEE
Q 043610          290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP  369 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~  369 (430)
                      .           ....+++....+.++..++..+.+ .++++..++.+++++++++.|.+ .|+++.+ .. ..+ ..+.
T Consensus       254 ~-----------~~~~~~~~~~~~aa~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~-~~~-~~~~  317 (416)
T PRK00011        254 F-----------PGIQGGPLMHVIAAKAVAFKEALE-PEFKEYAQQVVKNAKALAEALAE-RGFRVVS-GG-TDN-HLVL  317 (416)
T ss_pred             C-----------ccccCCccHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh-CCCeeee-cC-CCC-eEEE
Confidence            0           011245555566666666655443 36788999999999999999997 6887653 21 123 4566


Q ss_pred             EEcCCCchh-HHHHHHHHHcCCeecCCCC--------CCCeeEEeecC----CCCHHHHHHHHHHHHHHHHh
Q 043610          370 FTLEKSDLE-AEFVKEAAKEKMVQLKGHR--------SVGGMRASIYN----AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       370 f~~~~~~~~-~~~~~~L~~~Gi~~~~g~~--------~~g~iRis~~~----~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+++.+.+ .++.+.|.++||.+..++.        ...++|++...    .++++|+++++++|++++.+
T Consensus       318 i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~  389 (416)
T PRK00011        318 VDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN  389 (416)
T ss_pred             EeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence            677542323 3688889999999753211        12369997643    35799999999999998764

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.93  E-value=2.5e-24  Score=213.55  Aligned_cols=307  Identities=10%  Similarity=0.098  Sum_probs=218.0

Q ss_pred             CCceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.+++|+.  .|.+.|+.+++++.++..+..          +++...   ..++|+.+++++|++++ +++++ +|++++
T Consensus        19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~----------~y~~~~---~~~lr~~ia~~~~~~~~-~i~~~-~G~~~~   83 (346)
T TIGR01141        19 KEVIKLNSNENPFGPPPKAKEALRAEADKLH----------RYPDPD---PAELKQALADYYGVDPE-QILLG-NGSDEI   83 (346)
T ss_pred             CceEEccCCCCCCCCCHHHHHHHHHhHHHhh----------cCCCCC---HHHHHHHHHHHhCcChH-HEEEc-CCHHHH
Confidence            45777765  356788999999998764321          111111   14789999999998765 77764 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      +..++.+++++||+|++..+.+..+  ...++..| +++.++..+   .+ .+|+++++  +++++++|++++++|+||.
T Consensus        84 l~~~~~~l~~~gd~v~~~~p~y~~~--~~~~~~~g~~~~~~~~~~---~~-~~d~~~l~~~~~~~~~~v~l~~p~NptG~  157 (346)
T TIGR01141        84 IELLIRAFLEPGDAVLVPPPTYSMY--EISAKIHGAEVVKVPLDE---DG-QLDLEDILVAIDDKPKLVFLCSPNNPTGN  157 (346)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCHHHH--HHHHHHcCCeEEEeccCC---CC-CCCHHHHHHhcCCCCCEEEEeCCCCCCCC
Confidence            9999888889999999877654322  23455667 777777643   23 47888887  5788999999999999999


Q ss_pred             cCC--CCccc-c--CCCcEEEEeccCc-CCCC--cccc-ccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCC
Q 043610          224 EFK--EYPSA-K--NSTGILVADMSSN-FCSK--PVDV-TRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTP  290 (430)
Q Consensus       224 ~~p--ei~~~-~--~~g~~lvvD~a~s-~G~~--~idl-~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p  290 (430)
                      .+|  ++.++ +  ++++++++|++++ +...  +++. ...  .+++.|++||+|++|  +|++++++++++.+.+...
T Consensus       158 ~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~  237 (346)
T TIGR01141       158 LLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRA  237 (346)
T ss_pred             CCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccC
Confidence            999  55554 2  3599999999976 2221  1221 112  267889999998778  7999999998876543110


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                                    ..+.+.+.+.++..+++...   .++...++++++++++++.|.+..|+.+.+  +  .+ ..+.+
T Consensus       238 --------------~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~--~g-~~~~~  295 (346)
T TIGR01141       238 --------------PFNLSRLAQAAAIAALRDDD---FIEKTVEEINAERERLYDGLKKLPGLEVYP--S--DA-NFVLI  295 (346)
T ss_pred             --------------CCCCCHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHhcCCCEECC--C--cC-CEEEE
Confidence                          12345566666666665321   467888999999999999998744877543  1  23 45667


Q ss_pred             EcCCCchhHHHHHHHHHcCCeecCCCCC---CCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          371 TLEKSDLEAEFVKEAAKEKMVQLKGHRS---VGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       371 ~~~~~~~~~~~~~~L~~~Gi~~~~g~~~---~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      .+++  ...++.++|.++||.+.+|...   .+++|+|++   +++|+++++++|+
T Consensus       296 ~~~~--~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~  346 (346)
T TIGR01141       296 RFPR--DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR  346 (346)
T ss_pred             ecCC--CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence            7764  2347999999999998876432   568999976   7999999998874

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.93  E-value=1.1e-23  Score=211.63  Aligned_cols=328  Identities=13%  Similarity=0.062  Sum_probs=223.7

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT  144 (430)
                      +.++.++.|-  .++++.+++++.+.+.+.    ...|..   .....+..+.+.+.+.+++|  ++++ +|+++ +|++
T Consensus        24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~----~~~Y~~---~~G~~~lr~~la~~~~~~~~~~~~~~-~i~~t-~g~~   94 (382)
T PRK06108         24 EGVLPLWFGESDLPTPDFIRDAAAAALADG----ETFYTH---NLGIPELREALARYVSRLHGVATPPE-RIAVT-SSGV   94 (382)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCCHHHHHHHHHHHHHHhCCCcCcc-eEEEe-CChH
Confidence            4567777764  456788999988876531    101111   12233445566667777778  5555 77764 7899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +++..++..++++||+|++..+.+...  ...++..| +++.++...+ +.+..+|+++++  +++++++|++++++|||
T Consensus        95 ~al~~~~~~l~~~gd~vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPt  171 (382)
T PRK06108         95 QALMLAAQALVGPGDEVVAVTPLWPNL--VAAPKILGARVVCVPLDFG-GGGWTLDLDRLLAAITPRTRALFINSPNNPT  171 (382)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCccch--HHHHHHCCCEEEEeeCCCC-CCCccCCHHHHHHhcCccceEEEEECCCCCC
Confidence            999999999889999999877765543  23456677 7777776431 112246778886  67789999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcCCCCc--------cccccc---cEEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNFCSKP--------VDVTRF---GVIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~--------idl~~~---d~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      |..++  +   |.++ +++|+++++|++++.....        .++.+.   .+++.|++|.+|++|  +|+++++++++
T Consensus       172 G~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~  251 (382)
T PRK06108        172 GWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALG  251 (382)
T ss_pred             CcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHH
Confidence            99998  3   4443 5899999999987633211        233222   278899999999778  89999999888


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+....    .+        ....++...+.++..+|+...  ..++.++++++++++.+++.|++..|+.+..  +  
T Consensus       252 ~~~~~~~----~~--------~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--p--  313 (382)
T PRK06108        252 QVLEKLI----EY--------NTSCVAQFVQRAAVAALDEGE--DFVAELVARLRRSRDHLVDALRALPGVEVAK--P--  313 (382)
T ss_pred             HHHHHHH----Hh--------cccCCChHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHhCCCCcccC--C--
Confidence            7643210    00        112345566677776775321  1357788999999999999998755776542  2  


Q ss_pred             CccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+...+.+.+++.....++++.| +++||.+.+|..    ..+++|||++.  +++++++.++.|+++++|
T Consensus       314 ~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~  382 (382)
T PRK06108        314 DGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLAR  382 (382)
T ss_pred             CeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHhC
Confidence            12333456676422233788887 567999887642    24589999997  899999999999998764

>PRK07179 hypothetical protein; Provisional

Probab=99.93  E-value=2.6e-23  Score=210.88  Aligned_cols=309  Identities=12%  Similarity=0.060  Sum_probs=213.3

Q ss_pred             CcHHHHHHHHHHhhhccCC-CCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCC
Q 043610           81 LPEKVLLKAQSELYNWRGS-GMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd  159 (430)
                      -.|.|++++.+.+.++.+. ..|.   .+...  .....++++.|++++|.+   +++++ +||++|+..++..+..+||
T Consensus        69 ~~p~v~~a~~~~~~~~~~~~~~s~---~~~~~--~~~~~~le~~la~~~g~~---~~~~~-~sG~~An~~~l~~l~~~g~  139 (407)
T PRK07179         69 GHPDIIKAQIAALQEEGDSLVMSA---VFLHD--DSPKPQFEKKLAAFTGFE---SCLLC-QSGWAANVGLLQTIADPNT  139 (407)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCccc---cccCC--chHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHhCCCCC
Confidence            4678999999998765321 1121   12111  124457778999999985   35554 7899999999999988999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCccccCC--CCccc-cC
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVEFK--EYPSA-KN  233 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~~p--ei~~~-~~  233 (430)
                      ++++-...+.+. + ..++..| ...++.      + ..|+++++  +++ ++++|++.+++|++|.+.|  +|.++ ++
T Consensus       140 ~v~~~~~~h~s~-~-~~~~~~g-~~~~~~------~-~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~  209 (407)
T PRK07179        140 PVYIDFFAHMSL-W-EGVRAAG-AQAHPF------R-HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEE  209 (407)
T ss_pred             EEEEECCcCHHH-H-HHHHHCC-CeEEEe------c-CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHH
Confidence            887654444443 2 2233345 222222      1 24667776  554 5789999999999999999  78886 68


Q ss_pred             CCcEEEEeccCcCCCC---------ccccc-cccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCC
Q 043610          234 STGILVADMSSNFCSK---------PVDVT-RFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNS  303 (430)
Q Consensus       234 ~g~~lvvD~a~s~G~~---------~idl~-~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~  303 (430)
                      +|+++++|++|++|..         .+++. ..|+++.|+||++|++ +|++++++++++.+.....          ...
T Consensus       210 ~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~-~G~l~~~~~~~~~~~~~~~----------~~~  278 (407)
T PRK07179        210 FGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGR-AGIITCPRELAEYVPFVSY----------PAI  278 (407)
T ss_pred             cCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhcc-CeEEEeCHHHHHHHHHhCc----------Cee
Confidence            9999999999998753         23332 3489999999999864 6999999888665421110          011


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHH
Q 043610          304 LYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVK  383 (430)
Q Consensus       304 ~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~  383 (430)
                      ..+|++...++++.++++.+..   .++..+++.+++++++++|.+ .|+++..     .+ .++.+.++.......+.+
T Consensus       279 ~~~t~~~~~~aa~~aal~~~~~---~~~~~~~l~~~~~~l~~~L~~-~g~~v~~-----~~-~i~~l~~~~~~~~~~~~~  348 (407)
T PRK07179        279 FSSTLLPHEIAGLEATLEVIES---ADDRRARLHANARFLREGLSE-LGYNIRS-----ES-QIIALETGSERNTEVLRD  348 (407)
T ss_pred             eCCCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH-cCCCCCC-----CC-CEEEEEeCCHHHHHHHHH
Confidence            2356666777777788887642   366889999999999999997 5776542     23 356666653111225778


Q ss_pred             HHHHcCCee----cCCC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          384 EAAKEKMVQ----LKGH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       384 ~L~~~Gi~~----~~g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .|.++||.+    .++. ...+.+|||++.++|++||++++++|++++...
T Consensus       349 ~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        349 ALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             HHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence            899999973    2221 123579999999999999999999999987653

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.93  E-value=1.4e-23  Score=195.44  Aligned_cols=347  Identities=10%  Similarity=0.061  Sum_probs=255.2

Q ss_pred             ccCCCCCceeecCCCCCCcHHHHHHHHHH-hhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           64 QSGQEDRVFNFAAGPANLPEKVLLKAQSE-LYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp~~~~~~V~~a~~~~-~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      +..+.+-+||.+..-+..|+.+.+..++. .+.|.....-  +++.....|.++-+.+-..|+.++|+.++ ||+++ ++
T Consensus        26 f~lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lir--sw~~a~~~W~~lp~~lgdklApLiGA~~~-Evvv~-dt  101 (407)
T COG3844          26 FALPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIR--SWNKAKADWFDLPERLGDKLAPLIGARAG-EVVVT-DT  101 (407)
T ss_pred             ccCCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhh--hhcccCCchhhchhHHHHHhhhhhcCCCC-ceEEe-CC
Confidence            56667779998888888886666655544 4445432211  12223567888888999999999999886 88876 66


Q ss_pred             HHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHH---HHHHHhCCceEEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610          143 ATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAF---KEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC  215 (430)
Q Consensus       143 aT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~---~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~  215 (430)
                      ++--++.++.+.+  ++|+.|++.+.+.|....+   ..++-.+.-  ..+     .+ ++++++++  +++++.+|+++
T Consensus       102 ts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~--~~~-----~~-~~~P~~~~~~~~dd~AvV~L~  173 (407)
T COG3844         102 TSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG--YDL-----EG-VIAPRALEEAITDDVAVVLLS  173 (407)
T ss_pred             cchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc--ccc-----ee-eeChHHHHHhhccceEEEEec
Confidence            6666666666665  4689999888776653221   122222200  000     12 34455555  78999999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-c-CCccEEEEEcHHHHhccCCC
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-G-PSGVTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-g-p~G~g~l~v~~~~~~~~~~~  288 (430)
                      |++.-||..+|  .|.++ +++|++++.|-+|+.|..|+|+.++  ||.+.++||.+ | |-+.+++|+.++..+...+.
T Consensus       174 ~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~  253 (407)
T COG3844         174 HVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPP  253 (407)
T ss_pred             cccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccc
Confidence            99999999999  78887 7999999999999999999999887  69999999999 4 87799999999998875443


Q ss_pred             CCccccccc------hhh-----cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC---Cce
Q 043610          289 TPLMLDYKI------HDE-----NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN---GFY  354 (430)
Q Consensus       289 ~p~~~~~~~------~~~-----~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~---G~~  354 (430)
                      ...++....      ..+     .+...||+++....++..+|+... ..++.++++|...|.+++-+.++...   +++
T Consensus       254 lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa-~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~  332 (407)
T COG3844         254 LSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFA-DVDITELRKKSLALTDYFIELVEARCEYYGLT  332 (407)
T ss_pred             cccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhh-hcCHHHHHHhhhHHHHHHHHHHHhccccCCcE
Confidence            222221100      001     123458999999999999999665 45899999999999999999988743   566


Q ss_pred             ecCC-CCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecC-CCCHHHHHHHHHHHHHHHHhh
Q 043610          355 KCPV-EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYN-AMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       355 ~~~~-~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~~  429 (430)
                      +..+ +.+.|. ..+++..|.   ..++++.|.+.||+.  ..|..+.+|+++.. |++.+||-..++.|+++++.-
T Consensus       333 l~tPr~~~~rG-sqvS~~hp~---~~~V~qaLi~rGVig--D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~  403 (407)
T COG3844         333 LVTPRAHEERG-SQVSLYHPH---GYQVMQALIDRGVIG--DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL  403 (407)
T ss_pred             Eeccchhhhcc-ceeeEecCc---HHHHHHHHHHcCccc--cccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence            6543 445565 468888873   347999999999985  34677889999998 789999999999999998753

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.92  E-value=3e-24  Score=212.62  Aligned_cols=269  Identities=16%  Similarity=0.082  Sum_probs=196.2

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHHHHHHhhcCC------------CCC--cEEEEeCChhHHHHH
Q 043610          110 GKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQFAAVPLNLCT------------PND--PVDYIVTGSWGDKAF  174 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~~~~~~sl~~------------~gd--~vl~~~~g~~~~~~~  174 (430)
                      ++...++.+++++.+++++|.+ ++.+++|+ +|+|+++..++..+..            +++  .|++....+++  +.
T Consensus        33 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t-~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~--~~  109 (345)
T cd06450          33 SPAATEMEAEVVNWLAKLFGLPSEDADGVFT-SGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS--VE  109 (345)
T ss_pred             CchhHHHHHHHHHHHHHHhCCCCCCCCEEEe-CChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH--HH
Confidence            3455677789999999999986 33367775 7899999988777531            333  33333334444  23


Q ss_pred             HHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEeecCCCccccCC--CCccc-cCCCcEEEEec
Q 043610          175 KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADM  242 (430)
Q Consensus       175 ~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~  242 (430)
                      ..++..| +++.++..+   .+ .+|+++++  +++      ++++|++++++|+||.+.|  +|.++ +++|+++++|+
T Consensus       110 ~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~  185 (345)
T cd06450         110 KAAAYLDVKVRLVPVDE---DG-RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA  185 (345)
T ss_pred             HHHHHHhcCeEEeeeCC---CC-CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec
Confidence            3444557 888887743   23 57888887  555      7889999999999999988  78886 68999999999


Q ss_pred             cCcCCCCcccc--------ccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHH
Q 043610          243 SSNFCSKPVDV--------TRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCI  313 (430)
Q Consensus       243 a~s~G~~~idl--------~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~  313 (430)
                      +|+.+..+++.        ...|++++++|||+ +|.|+|+++++                                  .
T Consensus       186 a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------------------~  231 (345)
T cd06450         186 AYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------------------A  231 (345)
T ss_pred             hhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH----------------------------------H
Confidence            99988865442        24588999999999 58999988765                                  2


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC---chhH-HHHHHHHHcC
Q 043610          314 YMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS---DLEA-EFVKEAAKEK  389 (430)
Q Consensus       314 ~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~---~~~~-~~~~~L~~~G  389 (430)
                      .++..+++.+.. .|++++.++..++++++++.|.+..|++++. ++  .+ .+++|.+++.   +.+. ++.++|.++|
T Consensus       232 ~~~~~~l~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~--~~-~iv~f~~~~~~~~~~~~~~i~~~L~~~g  306 (345)
T cd06450         232 LKLWATLRRFGR-DGYGEHIDRIVDLAKYLAELIRADPGFELLG-EP--NL-SLVCFRLKPSVKLDELNYDLSDRLNERG  306 (345)
T ss_pred             HHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CC--ce-eEEEEEECCcchhhHHHHHHHHHHHhcC
Confidence            333445565553 4789999999999999999999866777652 22  23 4678887642   2333 7889999887


Q ss_pred             CeecCCCC--CCCeeEEeecCC-CCHHHHHHHHHHHHH
Q 043610          390 MVQLKGHR--SVGGMRASIYNA-MPLAGVEKLVAFMKD  424 (430)
Q Consensus       390 i~~~~g~~--~~g~iRis~~~~-~t~edv~~ll~~L~~  424 (430)
                      ++...+..  ..+.+|+|++.+ ++++|+++++++|++
T Consensus       307 ~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         307 GWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             CEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence            66544322  234799999987 599999999999976

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.92  E-value=1.8e-23  Score=209.10  Aligned_cols=312  Identities=14%  Similarity=0.131  Sum_probs=218.7

Q ss_pred             CCCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      ...+++|+.|  +..+++.+++++.+.+..+.          .+....   ..++|+.+++++|++++ +|++ ++|+++
T Consensus        31 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~----------~y~~~~---~~~lr~~ia~~~~~~~~-~i~~-t~G~~~   95 (367)
T PRK02731         31 IADIIKLASNENPLGPSPKAIEAIRAAADELH----------RYPDGS---GFELKAALAEKFGVDPE-RIIL-GNGSDE   95 (367)
T ss_pred             CCceEEecCCCCCCCCCHHHHHHHHHHHHhhc----------CCCCCc---HHHHHHHHHHHhCcCHH-HEEE-cCCHHH
Confidence            4456777776  34567889999888764321          111111   24788999999999775 6766 578999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      ++..++.+++++||+|++..+.+..+.+  .++..| +++.++..   ++  .+|+++++  +++++++|++++++|+||
T Consensus        96 ~l~~~~~~l~~~gd~vl~~~p~y~~~~~--~~~~~g~~~~~~~~~---~~--~~~~~~l~~~~~~~~~~v~l~~p~nptG  168 (367)
T PRK02731         96 ILELLARAYLGPGDEVIYSEHGFAVYPI--AAQAVGAKPVEVPAK---DY--GHDLDAMLAAVTPRTRLVFIANPNNPTG  168 (367)
T ss_pred             HHHHHHHHhcCCCCEEEEecCCHHHHHH--HHHHcCCeEEEeccc---CC--CCCHHHHHHHhCCCCcEEEEeCCCCCCC
Confidence            9999888888999999987766544332  345667 77777652   23  36788876  678899999999999999


Q ss_pred             ccCC--CCccc-c--CCCcEEEEeccCcCCCC------cccccc-c-c-EEEeCCCccccCCc--cEEEEEcHHHHhccC
Q 043610          223 VEFK--EYPSA-K--NSTGILVADMSSNFCSK------PVDVTR-F-G-VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQ  286 (430)
Q Consensus       223 ~~~p--ei~~~-~--~~g~~lvvD~a~s~G~~------~idl~~-~-d-~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~  286 (430)
                      ..++  ++.++ +  ++|+++++|+++.....      .+++-+ . + +++.|++|.+|++|  +|++++++++++.+.
T Consensus       169 ~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~  248 (367)
T PRK02731        169 TYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALN  248 (367)
T ss_pred             cCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHH
Confidence            9999  56664 2  35899999998753221      122111 1 2 67889999999778  699999998887653


Q ss_pred             CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                      ....              ....+...+.++..+|+.   ...++.++++++++++.+++.|++ .|+.+.+  +  .+ .
T Consensus       249 ~~~~--------------~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~g-~  305 (367)
T PRK02731        249 RVRQ--------------PFNVNSLALAAAVAALDD---DAFVEKSRALNAEGMAWLTEFLAE-LGLEYIP--S--VG-N  305 (367)
T ss_pred             HccC--------------CCCCCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHH-CCCccCC--C--Cc-e
Confidence            3111              112345566666666652   223678888899999999999987 5776542  1  23 3


Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          367 NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       367 iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .+.+.+++.....++.++|.++||.+.++..  ..+++|||++   +.+|+++++++|+++++
T Consensus       306 ~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        306 FILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKEFLA  365 (367)
T ss_pred             EEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence            5667775422234799999999999876532  2468999986   78999999999999875

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.92  E-value=4e-23  Score=211.79  Aligned_cols=348  Identities=16%  Similarity=0.140  Sum_probs=237.2

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCC--cccccCCCcHHHHHHHH-HHHHHHHHHhCCCCCcEEEE-E-eC
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGM--SVMEMSHRGKEFKSIIE-KAESDLRALLNIPQEYSVLF-L-QG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~--s~~~~~~~~~~~~~~~~-~~r~~la~l~g~~~~~~vv~-~-~~  141 (430)
                      .+.+.+++.++--.+++.|++++...+.+-.+.|.  +.+   ..+.++.+.++ .+++..+++|+...+ ..++ + +.
T Consensus        32 ~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~---~~G~~~~d~lE~~~~~~~~~~f~~~~~-~~~~nv~~~  107 (475)
T PLN03226         32 RQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARY---YGGNEYIDQIETLCQKRALEAFRLDPE-KWGVNVQPL  107 (475)
T ss_pred             HHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcC---cCCChhHHHHHHHHHHHHHHHhCCCcc-eeEEecCcC
Confidence            34668889999999999999999998854333333  322   22333444444 466678889998764 3322 2 26


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEe---CChhHHHHHHHHHHhC-CceE---EecCCCCcCCCCCCccccc--c-CCCccE
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIV---TGSWGDKAFKEAQKFC-NPQV---IWSGKAEKYTKIPNFDALE--Q-NPDAKY  211 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~---~g~~~~~~~~~a~~~g-~~~~---v~~~~~~~~g~~~d~~~l~--i-~~~~~l  211 (430)
                      ||+.|+.+++.++++|||+|+..+   .|++++.+.....+.+ ....   ++..-+.+.| .+|+++++  + ..++++
T Consensus       108 SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g-~iD~d~Le~~l~~~~pkl  186 (475)
T PLN03226        108 SGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTG-LIDYDKLEKKAMLFRPKL  186 (475)
T ss_pred             chHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCC-CcCHHHHHHHHhhcCCeE
Confidence            789999999999999999998743   4566665533332322 1111   1211111233 57998887  3 346776


Q ss_pred             EEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccc-----ccccEEEeCCCccc-cCCccEEEEEcHHHH
Q 043610          212 LHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDV-----TRFGVIYAGAQKNV-GPSGVTIVIVRKDLL  282 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl-----~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~  282 (430)
                      |++  .++.+|+..|  +|.++ +++|+++++|++|++|....+.     ...|++++++|||+ ||.| |+++++++.+
T Consensus       187 Iv~--~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~  263 (475)
T PLN03226        187 IIA--GASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMIFFRKGPK  263 (475)
T ss_pred             EEE--ecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEEEEchhhc
Confidence            654  2566899988  78886 6899999999999999876543     35689999999999 8999 9999998776


Q ss_pred             hccCCCCCccccccchhhc---CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          283 GNAQDKTPLMLDYKIHDEN---NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~---~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      +...+....+.++....+.   ....++|+...++++..+|+++.+ .+++++.++..++++++++.|.+ .|+.++.. 
T Consensus       264 ~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~-~~~~~~~~~~~~na~~L~~~L~~-~G~~l~~~-  340 (475)
T PLN03226        264 PPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMT-PEFKAYQKQVKANAAALANRLMS-KGYKLVTG-  340 (475)
T ss_pred             ccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhC-cCHHHHHHHHHHHHHHHHHHHHh-CCCEEEcC-
Confidence            5433222223333111111   112367888899999999998874 47889999999999999999997 89998742 


Q ss_pred             CCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCC----C---CCCeeEEee----cCCCCHHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGH----R---SVGGMRASI----YNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~----~---~~g~iRis~----~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .. .+ +++.+.+...+.+. ++.+.|.+.||.+-.+.    .   ...+||++.    ..-.+++|++++.++|.++++
T Consensus       341 ~t-~~-hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~  418 (475)
T PLN03226        341 GT-DN-HLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT  418 (475)
T ss_pred             CC-CC-CEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence            11 12 45556663324444 67788999999875432    1   234699853    334579999999999998875

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=99.92  E-value=1.8e-23  Score=206.68  Aligned_cols=307  Identities=16%  Similarity=0.168  Sum_probs=224.9

Q ss_pred             eecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEeCcHHHHHHHHH
Q 043610           73 NFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-IPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        73 l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      +.+-.|.++|+.+++++.+.+..           .++.++-  ...++++.+++++| .+++ +|++. .|+++.+..++
T Consensus        28 ssNenP~gp~~~~~~~~~~~~~~-----------~~rYPd~--~~~~l~~a~a~~~~~~~~~-~V~~g-nGsde~i~~l~   92 (356)
T COG0079          28 SSNENPYGPPPKVIEAIRAALDK-----------LNRYPDP--DYRELRAALAEYYGVVDPE-NVLVG-NGSDELIELLV   92 (356)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHh-----------hccCCCC--cHHHHHHHHHHHhCCCCcc-eEEEc-CChHHHHHHHH
Confidence            34446777789999999887653           2333332  35688999999999 6654 66655 78999999999


Q ss_pred             hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--
Q 043610          152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--  226 (430)
Q Consensus       152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--  226 (430)
                      ..++.+||.|++..+.+..+.  ..++..| +++.++..+   +  ..|++.+.  +.+++++|++|++|||||..++  
T Consensus        93 ~~~~~~gd~vl~~~Ptf~~Y~--~~a~~~g~~~~~v~~~~---~--~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~  165 (356)
T COG0079          93 RAFVEPGDTVLIPEPTFSMYE--IAAQLAGAEVVKVPLKE---F--RLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE  165 (356)
T ss_pred             HHhhcCCCEEEEcCCChHHHH--HHHHhcCCeEEEecccc---c--ccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            999999999998876654443  2466677 888887742   3  46766654  6668999999999999999999  


Q ss_pred             CCccc---cCCCcEEEEeccCc-CCCCc-cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCcccccc
Q 043610          227 EYPSA---KNSTGILVADMSSN-FCSKP-VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYK  296 (430)
Q Consensus       227 ei~~~---~~~g~~lvvD~a~s-~G~~~-id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~  296 (430)
                      +|.++   ...+.++|||+++. |+..+ +. +...+  ++..|++|.+|.+|  +||++.++++++.+++..+      
T Consensus       166 ~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~------  239 (356)
T COG0079         166 ELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRP------  239 (356)
T ss_pred             HHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcC------
Confidence            66664   23389999999864 54421 11 12234  78899999999999  9999999999988654322      


Q ss_pred             chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCce-ecCCCCCCCccceEE-EEcCC
Q 043610          297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY-KCPVEKSVRSFMNVP-FTLEK  374 (430)
Q Consensus       297 ~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~-~~~~~~~~rs~~iv~-f~~~~  374 (430)
                              ++..|.++..++.++|+.-   .-++...+++.+.++++++.|+. .|+. +.+      |.+++. +.+++
T Consensus       240 --------p~~v~~~a~~aa~aal~~~---~~~~~~~~~~~~~r~rl~~~l~~-~~~~~v~p------S~aNFvlv~~~~  301 (356)
T COG0079         240 --------PFNVSSPALAAAIAALRDA---DYLEESVERIREERERLYAALKA-LGLFGVFP------SQANFVLVRVPD  301 (356)
T ss_pred             --------CCCCCHHHHHHHHHHcccH---HHHHHHHHHHHHHHHHHHHHHHh-CCCCeecC------CCCcEEEEECCC
Confidence                    2355777888888888753   24788999999999999999997 5544 443      334444 45554


Q ss_pred             CchhHHHHHHHHHcCCeecCCC---CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          375 SDLEAEFVKEAAKEKMVQLKGH---RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       375 ~~~~~~~~~~L~~~Gi~~~~g~---~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .. ..++.++|.++||++..-.   ...+++||+++   |+|+.++++++|++++++.
T Consensus       302 ~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg---t~een~~ll~AL~~~~~~~  355 (356)
T COG0079         302 AE-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG---TPEENDRLLAALREVLKGL  355 (356)
T ss_pred             cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHHhcc
Confidence            22 2368899999999976421   12458999999   8999999999999988753

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.92  E-value=4.5e-23  Score=207.18  Aligned_cols=311  Identities=12%  Similarity=0.049  Sum_probs=214.4

Q ss_pred             CCCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .+.++.++.|  |.++|+.+++++.+.. .          .+++...   ...++|+.+++++|++++ +|++ ++|+++
T Consensus        51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~~-~----------~~~Yp~~---~~~~lr~~ia~~~~~~~~-~I~~-t~Ga~~  114 (380)
T PLN03026         51 PEDIVKLDANENPYGPPPEVLEALGNMK-F----------PYVYPDP---ESRRLRAALAEDSGLESE-NILV-GCGADE  114 (380)
T ss_pred             ccceEEccCCCCCCCCCHHHHHHHHhhH-h----------hccCCCC---CHHHHHHHHHHHhCcChh-hEEE-cCCHHH
Confidence            3456666665  5667888999876421 1          1112111   134789999999999876 7766 588999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEEEEeecCCCc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANETIH  221 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t~t  221 (430)
                      ++..++..++++||+|++..+.+..+.  ..++..| ++..++..+  ++  .+|+++++  + ++++++|++++++|||
T Consensus       115 ~i~~~~~~~~~~gd~Vlv~~P~y~~y~--~~~~~~g~~~~~v~~~~--~~--~~d~~~l~~~~~~~~~~~v~l~~P~NPT  188 (380)
T PLN03026        115 LIDLLMRCVLDPGDKIIDCPPTFGMYV--FDAAVNGAEVIKVPRTP--DF--SLDVPRIVEAVETHKPKLLFLTSPNNPD  188 (380)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCChHHHH--HHHHHcCCEEEEeecCC--CC--CcCHHHHHHHHhccCCcEEEEeCCCCCC
Confidence            999999988899999998776643332  3455667 777777632  23  46778876  5 6889999999999999


Q ss_pred             cccCC--CCccccCCCcEEEEeccCcCCC-C--cc-cccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCc
Q 043610          222 GVEFK--EYPSAKNSTGILVADMSSNFCS-K--PV-DVTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPL  291 (430)
Q Consensus       222 G~~~p--ei~~~~~~g~~lvvD~a~s~G~-~--~i-dl~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~  291 (430)
                      |..++  ++.++.+..+++++|+++.--. .  .+ .+...+  +++.|++|.+|++|  +||++.++++++.+..... 
T Consensus       189 G~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~-  267 (380)
T PLN03026        189 GSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-  267 (380)
T ss_pred             CCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcC-
Confidence            99999  6766522238999999874211 1  11 122333  78899999999989  8999999988876532111 


Q ss_pred             cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                                   +...+.+.+.++..+|+..   .-+++.++++++.++++.+.|++..++.+.+   + .+ ..+.+.
T Consensus       268 -------------~~~~~~~~q~aa~~aL~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p---~-~~-~f~~~~  326 (380)
T PLN03026        268 -------------PYNVSVAAEVAACAALSNP---KYLEDVKNALVEERERLFGLLKEVPFLEPYP---S-DA-NFILCR  326 (380)
T ss_pred             -------------CCCCCHHHHHHHHHHhhCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCeECC---C-CC-eEEEEE
Confidence                         1245667777777777531   1356778888999999999998732333322   1 12 234456


Q ss_pred             cCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          372 LEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +++.....++.+.|.++||.+.++..  ..+++|||++   +.+++++++++|+++
T Consensus       327 ~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~~  379 (380)
T PLN03026        327 VTSGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQL  379 (380)
T ss_pred             CCCCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence            65311233799999999998866432  2458999998   688999999999864

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.92  E-value=6.7e-23  Score=203.81  Aligned_cols=321  Identities=12%  Similarity=0.076  Sum_probs=214.9

Q ss_pred             ccCCCCCceeecCCC--C-CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           64 QSGQEDRVFNFAAGP--A-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      ....++++++|+.|-  + +.++.+++++.+.+.++. .+.+.   +..........+++++.++++++.+.  .+ +++
T Consensus        11 ~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~-~~~~~---~~~~~g~~~~~~~l~~~la~~~~~~~--~i-~~~   83 (360)
T TIGR00858        11 VVRDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYG-AGSTA---SRLVSGNSPLHEELEEELAEWKGTEA--AL-LFS   83 (360)
T ss_pred             EEECCceEEecccCCcccCCCCHHHHHHHHHHHHhcC-CCCCC---cCcccCCcHHHHHHHHHHHHHhCCCC--EE-EEC
Confidence            345566677777763  2 356899999999886532 22211   11011112446688999999999643  44 444


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----CCccEEE
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----PDAKYLH  213 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~~~~lv~  213 (430)
                      + |++++..++..++++||+|++..+.+.+. + ..++..| ++..++.         +|+++++  ++    +++++|+
T Consensus        84 ~-G~~~~~~~l~~~~~~gd~v~~~~~~~~~~-~-~~~~~~g~~~~~~~~---------~d~~~l~~~~~~~~~~~~~~v~  151 (360)
T TIGR00858        84 S-GYLANVGVISALVGKGDLILSDALNHASL-I-DGCRLSGARVRRYRH---------NDVEHLERLLEKNRGERRKLIV  151 (360)
T ss_pred             c-hHHHHHHHHHHhCCCCCEEEEEccccHHH-H-HHHHhcCCceEEecC---------CCHHHHHHHHHHcccCCCeEEE
Confidence            4 56777777777788999988766554433 2 2344456 5544432         4556665  32    3578999


Q ss_pred             EeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc---------c--ccccEEEeCCCccccCCccEEEEEcH
Q 043610          214 ICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD---------V--TRFGVIYAGAQKNVGPSGVTIVIVRK  279 (430)
Q Consensus       214 i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id---------l--~~~d~~~~s~~K~~gp~G~g~l~v~~  279 (430)
                      +.++.|++|...|  +|.++ +++|+++++|++|+.|..+.+         +  ++.++++.|++|++|++| |+++.++
T Consensus       152 ~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g-G~~~~~~  230 (360)
T TIGR00858       152 TDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG-AYVAGSQ  230 (360)
T ss_pred             EeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC-cEEEcCH
Confidence            9999999999999  78886 689999999999987653211         2  234688999999999888 9999888


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      ++++.+.+....+          ...++.+...+.++.++++++..   .+++.+++.++++++++.|.+ .|+++.+  
T Consensus       231 ~~~~~~~~~~~~~----------~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~~l~~~L~~-~~~~~~~--  294 (360)
T TIGR00858       231 ALIDYLINRARTL----------IFSTALPPAVAAAALAALELIQE---EPWRREKLLALIARLRAGLEA-LGFTLMP--  294 (360)
T ss_pred             HHHHHHHHhCccc----------eecCCCCHHHHHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHHHH-cCCccCC--
Confidence            8876542211100          01123344556777788886642   367889999999999999997 6776542  


Q ss_pred             CCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      +  .++ .+.+.+++.....++.++|.++||.+.++..     ..+++|||++.+++++|+++++++|+
T Consensus       295 ~--~~~-~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       295 S--CTP-IVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             C--CCC-EEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence            1  233 4556665311133799999999999864321     12479999999999999999999874

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.92  E-value=1.2e-22  Score=204.03  Aligned_cols=320  Identities=13%  Similarity=0.090  Sum_probs=213.2

Q ss_pred             CCCCceeecCCC--C-CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           67 QEDRVFNFAAGP--A-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        67 ~~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      ..+++++++.|-  + ..++.|++++.+.+.++.. +.+.+ ....  ......+++++.+++++|.+   +.+++ +++
T Consensus        37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~-~~~~~-~~~~--g~~~~~~~l~~~la~~~~~~---~~i~~-~~g  108 (385)
T PRK05958         37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGA-GSGGS-RLVT--GNSPAHEALEEELAEWFGAE---RALLF-SSG  108 (385)
T ss_pred             CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCC-CCCCc-Cccc--CCcHHHHHHHHHHHHHhCCC---cEEEE-CcH
Confidence            455566666552  2 3578899999998876421 11110 1111  12345678899999999953   34555 457


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeec
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICAN  217 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~  217 (430)
                      ++++..++..++++||+|++....+.+..  ..++..| +++.++.         .|+++++  +++   ++.++++.++
T Consensus       109 ~~~~~~~l~~~~~~gd~V~~~~~~~~~~~--~~~~~~g~~~~~~~~---------~d~~~l~~~i~~~~~~~~lvi~~~~  177 (385)
T PRK05958        109 YAANLAVLTALAGKGDLIVSDKLNHASLI--DGARLSRARVRRYPH---------NDVDALEALLAKWRAGRALIVTESV  177 (385)
T ss_pred             HHHHHHHHHHhCCCCCEEEEeCccCHHHH--HHHHhcCCceEEeCC---------CCHHHHHHHHHhccCCCeEEEEEec
Confidence            77877777777899999987655444332  2233446 5554432         3555565  332   3667777788


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc------c---ccccc-c-EEEeCCCccccCCccEEEEEcHHHHh
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP------V---DVTRF-G-VIYAGAQKNVGPSGVTIVIVRKDLLG  283 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~------i---dl~~~-d-~~~~s~~K~~gp~G~g~l~v~~~~~~  283 (430)
                      .|++|...+  +|.++ +++|+++++|++|+.|...      .   ++... + +++.|++|++|++| |+++.++++.+
T Consensus       178 ~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-g~~~~~~~~~~  256 (385)
T PRK05958        178 FSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG-AAVLGSETLID  256 (385)
T ss_pred             ccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC-cEEEcCHHHHH
Confidence            999999988  78886 6899999999999866432      1   22222 3 78899999999888 88888888766


Q ss_pred             ccCCCC-CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          284 NAQDKT-PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       284 ~~~~~~-p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      .+.... ++.           ..++++...+.++..+++++.+  . +++.+++.++++++++.|.+ .|+++.+  +  
T Consensus       257 ~~~~~~~~~~-----------~~~~~~~~~~aa~~aal~~~~~--~-~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~--  317 (385)
T PRK05958        257 YLINRARPFI-----------FTTALPPAQAAAARAALRILRR--E-PERRERLAALIARLRAGLRA-LGFQLMD--S--  317 (385)
T ss_pred             HHHHhCccce-----------ecCCCCHHHHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHHHHH-cCCCcCC--C--
Confidence            532111 110           1123445566677788887653  2 67889999999999999986 6776542  1  


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC---C--CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR---S--VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~---~--~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .+ ..+.|.+++.....++.+.|.++||.+.++..   .  .+++|||++.+++++|++++++.|++++
T Consensus       318 ~~-~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~  385 (385)
T PRK05958        318 QS-AIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL  385 (385)
T ss_pred             CC-CEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence            23 35667776422233799999999999865211   1  2479999999999999999999998753

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.92  E-value=8.3e-23  Score=204.59  Aligned_cols=319  Identities=12%  Similarity=0.076  Sum_probs=204.3

Q ss_pred             ccCCCCCceeecCCCCCCcHHHHHHHHHHhhhcc--CCCCcccccCCC-cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           64 QSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWR--GSGMSVMEMSHR-GKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~--~~g~s~~~~~~~-~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      +.....+-||..+...++.+.+++++.++..+.-  +.|.    .+.+ -....+.++++|+.|++++|+++  . +++ 
T Consensus         6 ~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----~gs~~~~g~~~~~~~~e~~la~~~~~~~--~-l~~-   77 (370)
T PRK05937          6 SIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGY----GGSRAILGPSSLLDDLEHKIAHFHGAPE--A-FIV-   77 (370)
T ss_pred             eEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCC----CCcCcccCChHHHHHHHHHHHHHhCCCe--E-EEE-
Confidence            3344445566555555666666666666543220  1111    1111 11245788899999999999963  3 555 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHh-CCceEEecCCCCcCCCCCCccccc--cC------CCccE
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVIWSGKAEKYTKIPNFDALE--QN------PDAKY  211 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~-g~~~~v~~~~~~~~g~~~d~~~l~--i~------~~~~l  211 (430)
                      ++++.++..++..+.++||.++ .+....+.-+ ...+.. +..  +.      ++ ..|+++++  ++      +++.+
T Consensus        78 ~sG~~a~~~~~~~~~~~~d~ii-~d~~~H~sv~-~~~~~~~~~~--~~------~~-~~d~~~l~~~l~~~~~~~~~~~~  146 (370)
T PRK05937         78 PSGYMANLGLCAHLSSVTDYVL-WDEQVHISVV-YSLSVISGWH--QS------FR-HNDLDHLESLLESCRQRSFGRIF  146 (370)
T ss_pred             CChHHHHHHHHHHhCCCCCEEE-EEhhhhHHHH-HHHHHcCCce--EE------ec-CCCHHHHHHHHHhhhccCCCcEE
Confidence            4566777766555556666554 4333322222 112222 322  11      22 24666665  33      34667


Q ss_pred             EEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc----cc-----cEEEeCCCccccCCccEEEEEcH
Q 043610          212 LHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT----RF-----GVIYAGAQKNVGPSGVTIVIVRK  279 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~----~~-----d~~~~s~~K~~gp~G~g~l~v~~  279 (430)
                      |+++++++++|.+.|  +|.++ +++|++++||++|++|..+.+..    .+     ++.+.+++|++||.|.|+++.+ 
T Consensus       147 v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~~vl~~~-  225 (370)
T PRK05937        147 IFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSSS-  225 (370)
T ss_pred             EEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCceEEEcCH-
Confidence            889999999999999  88886 68899999999999998776652    22     2567899999999998887764 


Q ss_pred             HHHhccC-CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610          280 DLLGNAQ-DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV  358 (430)
Q Consensus       280 ~~~~~~~-~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~  358 (430)
                      +..+... ...|..           ..++.+.+.++++..+++++.+. | +.++++++++++++++.|.. .+      
T Consensus       226 ~~~~~~~~~~~~~~-----------~s~~~~~~~~~a~~aal~~l~~~-~-~~~~~~l~~l~~~l~~~l~~-~~------  285 (370)
T PRK05937        226 EVKQDLMLNSPPLR-----------YSTGLPPHLLISIQVAYDFLSQE-G-ELARKQLFRLKEYFAQKFSS-AA------  285 (370)
T ss_pred             HHHHHHHHhCCCCe-----------ecCCCCHHHHHHHHHHHHHHHhC-c-HHHHHHHHHHHHHHHHhcCC-CC------
Confidence            4333221 111211           11345666788899999988753 4 56788899999999887753 11      


Q ss_pred             CCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCC-CCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG-HRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g-~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                          ... +++|.+++. ...++.+.|.++||.+... ....+.+|||++.++|++||++++++|++++++
T Consensus       286 ----~~~-~~~i~~~~~-~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~  350 (370)
T PRK05937        286 ----PGC-VQPIFLPGI-SEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEK  350 (370)
T ss_pred             ----CCC-EEEEEeCCh-hHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence                011 234556542 1236888899999976421 112457999999999999999999999998764

>PLN03032 serine decarboxylase; Provisional

Probab=99.92  E-value=5.5e-23  Score=204.09  Aligned_cols=311  Identities=12%  Similarity=0.053  Sum_probs=222.8

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEE--EEEeCcHHHHHHHHHhhcC--C
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSV--LFLQGGATTQFAAVPLNLC--T  156 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~v--v~~~~gaT~a~~~~~~sl~--~  156 (430)
                      ....++++|..++.+..+++++   .+..+....++.+++++.+++++|.+++ ++  +| |+||||++..++...-  .
T Consensus        35 ~~~~~~~~~~~~~~~~~gnP~s---~~~~g~~a~~~e~~v~~~ia~llg~~~~-~~~G~f-TsGGTEaNl~al~~ar~~~  109 (374)
T PLN03032         35 FDYGELSQLMKYSINNLGDPFI---ESNYGVHSRQFEVGVLDWFARLWELEKD-EYWGYI-TTCGTEGNLHGILVGREVF  109 (374)
T ss_pred             cChHHHHHHHHhcccCCCCCcc---cCCCCccHHHHHHHHHHHHHHHhCCCCc-cCCEEE-eCchHHHHHHHHHHHHHhC
Confidence            4556788888887654455544   3334567788899999999999999875 54  55 5889999987766532  2


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeecCCCccccCC--CC
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICANETIHGVEFK--EY  228 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~~t~tG~~~p--ei  228 (430)
                      +++++++....|++.  .+.++.+| +++.|++++   .| .+|+++|+  +++   ++.+|++++.+|.+|.+.|  +|
T Consensus       110 ~~~~vi~s~~~H~Sv--~kaa~~lg~~~~~V~~d~---~g-~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI  183 (374)
T PLN03032        110 PDGILYASRESHYSV--FKAARMYRMEAVKVPTLP---SG-EIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRI  183 (374)
T ss_pred             CCcEEEeCCCceeHH--HHHHHHcCCCCeEeeeCC---CC-cCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHH
Confidence            455666555666663  34556677 787888753   45 58999987  554   4779999999999999999  88


Q ss_pred             ccc-cCCC-----cEEEEeccCcCCCCcc-------ccc-cccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccc
Q 043610          229 PSA-KNST-----GILVADMSSNFCSKPV-------DVT-RFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLML  293 (430)
Q Consensus       229 ~~~-~~~g-----~~lvvD~a~s~G~~~i-------dl~-~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~  293 (430)
                      +++ +++|     ++++||++++.+..|+       |+. ..|.++.++|||+| |.|+|+++++++.++.+.. .+.|+
T Consensus       184 ~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~-~~~Yl  262 (374)
T PLN03032        184 LRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQ-NVEYL  262 (374)
T ss_pred             HHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhcc-CCccc
Confidence            886 5664     6999999999888875       332 24789999999998 9999999999887765432 22343


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                      ....    ....|+.+-.....+..+|+.+-. .|+.++.+++.++++++.++|.+ .|++++. +|  .+ .+++|.-+
T Consensus       263 ~~~d----~ti~gSR~g~~~l~~w~~l~~~G~-~g~~~~~~~~~~~a~~l~~~l~~-~~~~~~~-~p--~~-~~V~f~~~  332 (374)
T PLN03032        263 NSRD----ATIMGSRNGHAPLYLWYTLRRKGY-RGIKRDVQHCMRNAHYLKDRLTE-AGLTCRL-NE--LS-STVVFERP  332 (374)
T ss_pred             CCCC----CcccCCCchHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHHh-CCCcEEE-CC--Cc-eEEEEcCC
Confidence            2211    122366665666667777876653 58999999999999999999997 6887653 33  23 35667655


Q ss_pred             CCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          374 KSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       374 ~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      .   ...+.     +|+....   ..+.+||.++...+.+.+|+|++.|++
T Consensus       333 ~---~~~~~-----~~w~l~~---~~~~~hi~vm~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        333 M---DEAFI-----KKWQLAC---EGDIAHVVVMPNVTVEKLDEFVEELVE  372 (374)
T ss_pred             C---cHhHh-----heeeecc---cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence            2   11111     3443322   123799999999999999999998875

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.92  E-value=5.5e-23  Score=205.11  Aligned_cols=310  Identities=12%  Similarity=0.113  Sum_probs=210.4

Q ss_pred             CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      |-+.+|++|+++|.++.+++           +   ...+.++++++.+++++|++   +++++ +|+|+|+++++.++++
T Consensus        21 g~s~~~~~v~~a~~~~~~~~-----------~---~~~~~~~~~~~~~a~~~g~~---~~~~~-~g~t~al~~al~al~~   82 (363)
T TIGR01437        21 GVSTVSDEVADAQKRGAQNY-----------F---EIKELVNKTGEYIANLLGVE---DAVIV-SSASAGIAQSVAAVIT   82 (363)
T ss_pred             CCCCCCHHHHHHHHHHHhcC-----------C---CHHHHHHHHHHHHHHhhCCC---eEEEE-cCHHHHHHHHHHHHhc
Confidence            55779999999999987532           1   13466789999999999985   56664 7899999999999998


Q ss_pred             CCC---------------cEEEEeCChhHH---HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEE-E
Q 043610          157 PND---------------PVDYIVTGSWGD---KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLH-I  214 (430)
Q Consensus       157 ~gd---------------~vl~~~~g~~~~---~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~-i  214 (430)
                      +||               +|++.. +++..   .+.......| +++.+...    +  .+|+++++  ++++|++++ +
T Consensus        83 ~Gd~~~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~~~v~v~~~----~--~~d~~~le~ai~~~t~ai~~v  155 (363)
T TIGR01437        83 RGNRYLVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGGKVVEAGYA----N--ECSAEQLEAAITEKTAAILYI  155 (363)
T ss_pred             CCCcchhhcccccccccceEEEEC-ccchhcCCchHHHHHhcCCeEEEEcCC----C--CCCHHHHHHhcChhceEEEEE
Confidence            898               777644 33221   2223344456 77666542    2  37888888  789999766 4


Q ss_pred             eecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-ccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCCC
Q 043610          215 CANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-PVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKT  289 (430)
Q Consensus       215 ~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~  289 (430)
                      +++++++|.+.|  +|.++ +++|+++++|++|+.... ..++ ..|++++|+||++ ||. .|+++.+++.++.+.+..
T Consensus       156 ~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~~~~~~-g~D~~~~S~~K~l~gp~-~G~l~~~~~~i~~~~~~~  233 (363)
T TIGR01437       156 KSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQKYYRL-GADLVIYSGAKAIEGPT-SGLVLGKKKYIEWVKLQS  233 (363)
T ss_pred             ecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchHHHHHc-CCCEEEEeCCcccCCCc-eEEEEEcHHHHHHHHhcc
Confidence            556789999999  78886 789999999999973211 0112 2489999999988 688 599998888877643211


Q ss_pred             CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-CCCCC--ccc
Q 043610          290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EKSVR--SFM  366 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~~~r--s~~  366 (430)
                      .   ..    ......++   ..+.++.++++++.+ .+.+.+.++.+ .+++++++|.+..|+++... +....  -..
T Consensus       234 ~---~~----~~~~~~~~---~~~~gl~aAl~~~~~-~~~~~~~~~~~-~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~  301 (363)
T TIGR01437       234 K---GI----GRAMKVGK---ENILGLTAALEQYLS-TGKESGAEMVA-KLTPFIEALNTLKGVSASIVQDEAGRDIARA  301 (363)
T ss_pred             C---CC----cceeccCH---HHHHHHHHHHHHHHc-cCcccHHHHHH-HHHHHHHHHhcCCCeEEEEecCCCCCcCceE
Confidence            0   00    01112244   346777888888764 45566665655 45689999998778887631 11111  112


Q ss_pred             eEEEEcCCCchhH-HHHHHHHHcC--CeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          367 NVPFTLEKSDLEA-EFVKEAAKEK--MVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       367 iv~f~~~~~~~~~-~~~~~L~~~G--i~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .+.|.....+.+. ++.+.|+++|  |....-....+.+|+++.. ++++|+++++++|++++
T Consensus       302 ~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~~  363 (363)
T TIGR01437       302 EIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIREIV  363 (363)
T ss_pred             EEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence            3455543223444 7999998877  4443212345679999884 67999999999998863

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.92  E-value=6.2e-23  Score=206.26  Aligned_cols=325  Identities=12%  Similarity=0.081  Sum_probs=215.8

Q ss_pred             CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ..+++++.|  +.++++.+++++.+.+.+-.   .     .++...  .-..++|+.+++++|++++ +|+++ .|++++
T Consensus        28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~---~-----~~y~~~--~g~~~lr~~ia~~l~~~~~-~v~~~-~g~t~a   95 (380)
T PRK06225         28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGE---Y-----CKYPPP--EGFPELRELILKDLGLDDD-EALIT-AGATES   95 (380)
T ss_pred             CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC---C-----CCCCCC--cchHHHHHHHHHhcCCCCC-cEEEe-CCHHHH
Confidence            345555443  35678899999988875310   1     111111  1245788999999999876 77775 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      +..++.+++.+||+|++.++++...  ...++..| +++.++...+ +.+..+|+++++  +++++++|++++++|+||.
T Consensus        96 l~~~~~~~~~~gd~vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~  172 (380)
T PRK06225         96 LYLVMRAFLSPGDNAVTPDPGYLII--DNFASRFGAEVIEVPIYSE-ECNYKLTPELVKENMDENTRLIYLIDPLNPLGS  172 (380)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCCcch--HHHHHHhCceEEeeccccc-cCCccCCHHHHHhhcCCCceEEEEeCCCCCCCc
Confidence            9999999989999998877665433  23455677 7777765321 112246778876  6788999999999999999


Q ss_pred             cCC--C---Cccc-cCCCcEEEEeccCc---CCCCcc-ccc-cccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCC
Q 043610          224 EFK--E---YPSA-KNSTGILVADMSSN---FCSKPV-DVT-RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTP  290 (430)
Q Consensus       224 ~~p--e---i~~~-~~~g~~lvvD~a~s---~G~~~i-dl~-~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p  290 (430)
                      .++  +   |.++ +++|+++++|+++.   .+..+. .+. +..+++.|++|++|++|  +|++++++++++.+.+.. 
T Consensus       173 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~-  251 (380)
T PRK06225        173 SYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIV-  251 (380)
T ss_pred             CCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHH-
Confidence            988  3   4443 58899999999863   222221 111 22367789999999889  799999998877643210 


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                               .  .. .+.+...+.++..+|+...+  -++.+++..+++++.+++.|++..|+.+. ..+. .+ ..+.+
T Consensus       252 ---------~--~~-~~~~~~~~~~a~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~-~g-~~~~~  314 (380)
T PRK06225        252 ---------I--ND-LGTNVIAQEAAIAGLKVKDE--WIDRIRRTTFKNQKLIKEAVDEIEGVFLP-VYPS-HG-NMMVI  314 (380)
T ss_pred             ---------h--cc-cCCCHHHHHHHHHHHhcchH--HHHHHHHHHHHHHHHHHHHHHhCcCCccc-cCCC-CC-eEEEE
Confidence                     0  01 23355566666666653211  24556666777778888888864454321 1111 22 23445


Q ss_pred             EcCCCchhH-HHHHHHHHcCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          371 TLEKSDLEA-EFVKEAAKEKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       371 ~~~~~~~~~-~~~~~L~~~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+++.+.+. ++.++|.++||.+.+|..     ..+++|+|++.  ++++++++++.|++++++
T Consensus       315 ~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~  376 (380)
T PRK06225        315 DISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPDVVET  376 (380)
T ss_pred             EcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence            554322333 799999999999877632     13479999874  789999999999998864

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.92  E-value=6.5e-23  Score=207.19  Aligned_cols=336  Identities=10%  Similarity=0.068  Sum_probs=234.6

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHH-HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFK-SIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .+.+.+++.++.-.+++.|++++...+.+-...|.-. ...+.+-++. ++...+.+..+++||+... +|-.  -|++.
T Consensus        47 rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg-~ryy~g~~~~d~ie~l~~~ra~~lf~a~~a-nvqp--~Sg~~  122 (493)
T PRK13580         47 DQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPG-HRFYAGCQNVDTVEWEAAEHAKELFGAEHA-YVQP--HSGAD  122 (493)
T ss_pred             HHhcCceEecccccCCHHHHHHhcccccccCcCCCCC-ccccCCCchHHHHHHHHHHHHHHHhCCCcc-cccC--CCcHH
Confidence            3466888999999999999999998887644344311 1222233443 4445668888899999854 4443  57899


Q ss_pred             HHHHHHhhcCCC-------------------------------CCcEEEEeCC---hhHHHH-HHHHHHhCCceEEecCC
Q 043610          146 QFAAVPLNLCTP-------------------------------NDPVDYIVTG---SWGDKA-FKEAQKFCNPQVIWSGK  190 (430)
Q Consensus       146 a~~~~~~sl~~~-------------------------------gd~vl~~~~g---~~~~~~-~~~a~~~g~~~~v~~~~  190 (430)
                      |+.+++.++++|                               ||+|+-+...   +..+.+ .......-+.....+..
T Consensus       123 An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~  202 (493)
T PRK13580        123 ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDP  202 (493)
T ss_pred             HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCc
Confidence            999999999876                               7898876432   222211 00110111222233322


Q ss_pred             CCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccc--------cccc
Q 043610          191 AEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDV--------TRFG  257 (430)
Q Consensus       191 ~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl--------~~~d  257 (430)
                        +.+ .+|+++++  +.+++++|+++|.++. |...|  +|.++ +++|++++||++|++|.+..+.        ...|
T Consensus       203 --~~g-~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D  278 (493)
T PRK13580        203 --DTG-LLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHAD  278 (493)
T ss_pred             --ccC-ccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCc
Confidence              234 57888887  6888999999998888 55778  78887 6899999999999999886544        2458


Q ss_pred             EEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043610          258 VIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN  336 (430)
Q Consensus       258 ~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~  336 (430)
                      |+++++||++ ||.| |++++++++++.++...|+            .++++..+.++++..+++.+.+ .+..+..++.
T Consensus       279 ~vtgT~hKaL~GP~G-G~I~~~~~l~~~L~~a~P~------------i~gg~l~p~iAA~avAl~e~~~-~ef~~y~~~l  344 (493)
T PRK13580        279 IVTTTTHKTLRGPRG-GLVLAKKEYADAVDKGCPL------------VLGGPLPHVMAAKAVALAEART-PEFQKYAQQV  344 (493)
T ss_pred             EEEeCChhhccCCCe-EEEEecHHHHHHHhhCCCc------------ccCCCccHHHHHHHHHHHHHhC-ccHHHHHHHH
Confidence            9999999999 8998 9999999988766432332            2356666677777778877653 3456789999


Q ss_pred             HHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecC----CC-C---CCCeeEEeec
Q 043610          337 RKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLK----GH-R---SVGGMRASIY  407 (430)
Q Consensus       337 ~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~----g~-~---~~g~iRis~~  407 (430)
                      .+++++|++.|.+ .|+.++. .. ..+ +++++.+.+.+... .+.+.|.+.||.+..    .. .   ...+||||+.
T Consensus       345 ~~Na~~La~~L~~-~G~~vv~-gg-Tds-hIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~  420 (493)
T PRK13580        345 VDNARALAEGFLK-RGARLVT-GG-TDN-HLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTP  420 (493)
T ss_pred             HHHHHHHHHHHHh-cCCCccC-CC-CCC-CEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccc
Confidence            9999999999996 7998752 11 234 57788886533333 466689999998642    11 1   1347999988


Q ss_pred             CC----CCHHHHHHHHHHHHHHHHh
Q 043610          408 NA----MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       408 ~~----~t~edv~~ll~~L~~~~~~  428 (430)
                      ..    ++++|+++++++|.++++.
T Consensus       421 A~ttrg~teedi~~iad~l~~~l~~  445 (493)
T PRK13580        421 ALTTLGMGSDEMDEVAELIVKVLSN  445 (493)
T ss_pred             hhhhcCCCHHHHHHHHHHHHHHHHh
Confidence            74    4699999999999988753

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.92  E-value=9.9e-23  Score=202.62  Aligned_cols=313  Identities=14%  Similarity=0.074  Sum_probs=216.5

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.+++|+.|-  .++++.+++++.+.+.+-         ..++...  . ..++|+.++++++++++ +|++ ++|++++
T Consensus        24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~---------~~~y~~~--~-~~~lr~aia~~~~~~~~-~I~i-t~G~~~a   89 (353)
T PRK05387         24 AKLIKLNTNENPYPPSPKVLEAIRAALGDD---------LRLYPDP--N-ADALRQAIAAYYGLDPE-QVFV-GNGSDEV   89 (353)
T ss_pred             cceeeccCCCCCCCCCHHHHHHHHHHhhhh---------hhcCCCC--c-HHHHHHHHHHHhCCCHH-HEEE-cCCHHHH
Confidence            3456666543  455788999998766420         1122111  1 25889999999999876 7776 4789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccC
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEF  225 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~  225 (430)
                      +..++..++++||+|++..+++..+.  ..++..| +++.++..+  ++  .+|+++++  .++++|++++++||||.++
T Consensus        90 l~~~~~~l~~~gd~vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~--~~--~~d~~~l~--~~~~~v~~~~P~NPtG~~~  161 (353)
T PRK05387         90 LAHAFLAFFNHDRPLLFPDITYSFYP--VYAGLYGIPYEEIPLDD--DF--SIDVEDYL--RPNGGIIFPNPNAPTGIAL  161 (353)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCHHHHH--HHHHHcCCEEEEeecCC--CC--CCCHHHHH--hcCCEEEEeCCCCCCCCCC
Confidence            99999999999999998777664432  2355667 777777642  23  36777664  3568899999999999999


Q ss_pred             C--CCccc-c-CCCcEEEEeccCc-CCCCc-ccc-ccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCcccc
Q 043610          226 K--EYPSA-K-NSTGILVADMSSN-FCSKP-VDV-TRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       226 p--ei~~~-~-~~g~~lvvD~a~s-~G~~~-idl-~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~  294 (430)
                      +  ++.++ + .+++++++|+++. ++..+ ..+ +..  .+++.|++|.+|.+|  +|+++.++++++.+......   
T Consensus       162 ~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~---  238 (353)
T PRK05387        162 PLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNS---  238 (353)
T ss_pred             CHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhcc---
Confidence            9  56665 2 3489999999864 33221 111 122  388999999999878  99999998887765321110   


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                              ....+.+.+.+.++..+|+.   .+.+++.++++.++++++++.|++ .|+.+.+   + .+ ..+.+.+++
T Consensus       239 --------~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~---~-~~-~~~~~~~~~  301 (353)
T PRK05387        239 --------FNSYPLDRLAQAGAIAAIED---EAYFEETRAKVIATRERLVEELEA-LGFEVLP---S-KA-NFVFARHPS  301 (353)
T ss_pred             --------CCCCCcCHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHH-CCCeECC---C-cC-cEEEEECCC
Confidence                    01235677788877777753   123567888889999999999987 5876542   1 23 234456553


Q ss_pred             CchhHHHHHHHHHcCCeecCC--CCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          375 SDLEAEFVKEAAKEKMVQLKG--HRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       375 ~~~~~~~~~~L~~~Gi~~~~g--~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       ....++.+.|.++||.+..-  ....+++|||++   +.+++++++++|++++.
T Consensus       302 -~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        302 -HDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA  352 (353)
T ss_pred             -CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence             12337999999999987431  112457999997   67999999999999865

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.92  E-value=5.4e-23  Score=205.51  Aligned_cols=306  Identities=12%  Similarity=0.102  Sum_probs=216.0

Q ss_pred             CCceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.++.++.  .|.++|+.+++++.+.+.+.          +.+ +.  .-..++|+.+++++|++++ +|+++ +|++++
T Consensus        29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~----------~~Y-p~--~g~~~Lr~aia~~~~~~~~-~I~vt-~Gs~e~   93 (366)
T PRK01533         29 HSFVKLASNENPFGCSPRVLDELQKSWLDH----------ALY-PD--GGATTLRQTIANKLHVKME-QVLCG-SGLDEV   93 (366)
T ss_pred             CceEEeCCCCCCCCCCHHHHHHHHHHHHhc----------CcC-CC--CCHHHHHHHHHHHhCCCcc-eEEEC-CCHHHH
Confidence            34555555  55678899999998775431          111 11  1124788999999999886 77764 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      +..++..++++||+|++..+.+..+.  ..++..| +++.++...   +  .+|+++++  +++++++|++++++||||.
T Consensus        94 i~~~~~~l~~~gd~vlv~~P~y~~~~--~~~~~~g~~v~~v~~~~---~--~~d~~~l~~~~~~~~~~v~i~~P~NPTG~  166 (366)
T PRK01533         94 IQIISRAVLKAGDNIVTAGATFPQYR--HHAIIEGCEVKEVALNN---G--VYDLDEISSVVDNDTKIVWICNPNNPTGT  166 (366)
T ss_pred             HHHHHHHhcCCCCEEEEcCCcHHHHH--HHHHHcCCEEEEeecCC---C--CcCHHHHHHHhCcCCcEEEEeCCCCCCCC
Confidence            99999999999999998777665542  3456678 777777632   3  37888887  6788999999999999999


Q ss_pred             cCC--CCccc---cCCCcEEEEeccCcC-C---CC-c-cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCC
Q 043610          224 EFK--EYPSA---KNSTGILVADMSSNF-C---SK-P-VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQD  287 (430)
Q Consensus       224 ~~p--ei~~~---~~~g~~lvvD~a~s~-G---~~-~-id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~  287 (430)
                      +++  ++.++   .+.+.++++|+++.- .   .. + +. ++..+  +++.|++|.+|++|  +||++.++++++.+..
T Consensus       167 ~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~  246 (366)
T PRK01533        167 YVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNV  246 (366)
T ss_pred             CcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHH
Confidence            999  45443   233457888998642 1   10 1 11 12223  78899999999889  8999999888876532


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..              .....|.+.+.++..+|+.   ....+.+.+...+.++++.+.+++ .|+.+.+   + .++ -
T Consensus       247 ~~--------------~~~~~~~~~q~aa~~~l~~---~~~~~~~~~~~~~~r~~~~~~l~~-~g~~~~~---~-~~n-f  303 (366)
T PRK01533        247 VR--------------LPFNVSSLAQKAATIAFGD---DEFIEEIVRVNTEGLRQYESFCKE-NEIPFYQ---S-QTN-F  303 (366)
T ss_pred             hc--------------CCCCcCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHh-CCCccCC---C-cCc-E
Confidence            11              1135677788888888853   113456677777888888888886 6776543   1 232 2


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.+++   ..++.+.|.++||.+.+   ..+++|||++   +.+++++|+++|++++..
T Consensus       304 ~~~~~~~---~~~~~~~l~~~GI~Vr~---~~~~iRis~~---~~~~~~~l~~al~~~~~~  355 (366)
T PRK01533        304 IFLPVEN---GGEIYEACAHAGFIIRP---FPNGVRITVG---TREQNEGVISVLQQHFEN  355 (366)
T ss_pred             EEEeCCC---HHHHHHHHHHCCcEEcc---CCCceEEeCC---CHHHHHHHHHHHHHHHHh
Confidence            3345542   23688899999999875   2467999998   799999999999998754

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.91  E-value=2e-22  Score=204.24  Aligned_cols=332  Identities=11%  Similarity=0.102  Sum_probs=219.6

Q ss_pred             CCCceeecCC-C--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--C-CcEEEEEeC
Q 043610           68 EDRVFNFAAG-P--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--Q-EYSVLFLQG  141 (430)
Q Consensus        68 ~~~~~l~~~g-p--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~-~~~vv~~~~  141 (430)
                      +++.++|+.| |  .++++.+++++.+.+.+....+   |...   ....++.+.+.+.+++++|.+  + + +|++ ++
T Consensus        38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~---Y~~~---~G~~~LR~aia~~l~~~~g~~~~~~~-~I~i-t~  109 (405)
T PRK06207         38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQA---YTEY---RGDADIRELLAARLAAFTGAPVDAAD-ELII-TP  109 (405)
T ss_pred             CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCcc---CCCC---CCCHHHHHHHHHHHHHHhCCCCCCCC-CEEE-eC
Confidence            3445555543 3  3467788888887764311111   1111   123345567778888888963  3 3 6766 57


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC-CcCCCCCCccccc--cCCCccEEEEeec
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA-EKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~-~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      |+++++..++..++++||+|++..++++++.  ..++..| +++.++.... .+.+..+|+++++  +.+++++|+++++
T Consensus       110 Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~--~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P  187 (405)
T PRK06207        110 GTQGALFLAVAATVARGDKVAIVQPDYFANR--KLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNP  187 (405)
T ss_pred             CcHHHHHHHHHHhcCCCCEEEEeCCCchhHH--HHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCC
Confidence            8999999999999999999999888776643  4566677 7777776410 0112347888887  6778999999999


Q ss_pred             CCCccccCC--C---Cccc-cCCCcEEEEeccCcC----CCCccccc---c-cc--EEEeCCCccccCCc--cEEEEEcH
Q 043610          218 ETIHGVEFK--E---YPSA-KNSTGILVADMSSNF----CSKPVDVT---R-FG--VIYAGAQKNVGPSG--VTIVIVRK  279 (430)
Q Consensus       218 ~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~----G~~~idl~---~-~d--~~~~s~~K~~gp~G--~g~l~v~~  279 (430)
                      +||||.+++  +   |.++ +++|+++++|++++.    |.....+.   . .+  +++.|++|.+|.+|  +|+++.++
T Consensus       188 ~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~  267 (405)
T PRK06207        188 NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP  267 (405)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH
Confidence            999999999  3   4443 578999999999764    22111221   1 23  78899999999779  99999999


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      ++++.+.....            ......+.+.+.++..+|+.-  .+-+++..+++++.++.+.+.|.+..|+.+..  
T Consensus       268 ~l~~~~~~~~~------------~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--  331 (405)
T PRK06207        268 AIIDRMEKLQA------------IVSLRAAGYSQAVLRTWFSEP--DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRA--  331 (405)
T ss_pred             HHHHHHHHHHh------------HhccCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHhcCCCceecC--
Confidence            88776432110            011123445566666666421  11246667777888888999998644665432  


Q ss_pred             CCCCccceEEEEcCCCchh-HHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          360 KSVRSFMNVPFTLEKSDLE-AEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~-~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      +  ....-+.+.+++...+ .++.+.|. ++||.+.+|..    ..+++|||+..  +.++++..++.|+++++++
T Consensus       332 p--~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~  403 (405)
T PRK06207        332 P--QAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIAQLIERY  403 (405)
T ss_pred             C--CeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence            1  1122344566532223 37888885 67999988753    24589999985  6888999999999888765

>PRK07324 transaminase; Validated

Probab=99.91  E-value=7.3e-23  Score=205.22  Aligned_cols=285  Identities=13%  Similarity=0.127  Sum_probs=197.3

Q ss_pred             HHHHHHHHHhC-CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC
Q 043610          119 KAESDLRALLN-IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK  196 (430)
Q Consensus       119 ~~r~~la~l~g-~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~  196 (430)
                      ++|+.++++++ .+++ +|++ ++|+++++..++.+++++||+|++..+++...  ...++..| +++.++...+  .+.
T Consensus        66 ~lr~~ia~~~~~~~~~-~vi~-t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~~~~~~g~~v~~v~~~~~--~~~  139 (373)
T PRK07324         66 EFKEAVASLYQNVKPE-NILQ-TNGATGANFLVLYALVEPGDHVISVYPTYQQL--YDIPESLGAEVDYWQLKEE--NGW  139 (373)
T ss_pred             HHHHHHHHHhcCCChh-hEEE-cCChHHHHHHHHHHhCCCCCEEEEcCCCchhH--HHHHHHcCCEEEEEecccc--cCC
Confidence            67788888775 5554 7766 47899999999999999999999877665443  24566778 8888887542  333


Q ss_pred             CCCccccc--cCCCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC---cc---ccccccEEEeC
Q 043610          197 IPNFDALE--QNPDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK---PV---DVTRFGVIYAG  262 (430)
Q Consensus       197 ~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~i---dl~~~d~~~~s  262 (430)
                      .+|+++++  +++++|+|++++++||||.+++  +   |.++ +++|+++++|++++.-..   ..   +..+..+.+.|
T Consensus       140 ~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s  219 (373)
T PRK07324        140 LPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNS  219 (373)
T ss_pred             CCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEec
Confidence            57888886  6789999999999999999999  3   4443 589999999998652111   11   12122378899


Q ss_pred             CCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          263 AQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       263 ~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      ++|.+|++|  +|+++.++++++.+.....            ....+.+.....++..+|+...+  -++..++.+++.+
T Consensus       220 ~SK~~~~~G~RiG~i~~~~~li~~~~~~~~------------~~~~~~~~~~q~~a~~~l~~~~~--~l~~~~~~~~~~~  285 (373)
T PRK07324        220 MSKTYSLPGIRVGWIAANEEVIDILRKYRD------------YTMICAGVFDDMLASLALEHRDA--ILERNRKIVRTNL  285 (373)
T ss_pred             chhhcCCccceeEEEecCHHHHHHHHHHhC------------cEEecCChHHHHHHHHHHcCHHH--HHHHHHHHHHHHH
Confidence            999999889  7999998888876543111            01123455566666666653221  3456677777788


Q ss_pred             HHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHH
Q 043610          341 ELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~  417 (430)
                      +.+.+.|.+..++....  + ..+ ....+.++....+.+|+++| +++||.+.+|..  ..+++|||+..  +++.+++
T Consensus       286 ~~l~~~l~~~~~~~~~~--p-~gg-~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~--~~~~l~~  359 (373)
T PRK07324        286 AILDEWVAKEPRVSYVK--P-KAV-STSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC--DTETLKK  359 (373)
T ss_pred             HHHHHHHhcCCCceEEC--C-Cce-EEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC--CHHHHHH
Confidence            88888888644555432  2 112 22233444211233788886 577999988753  35689999975  6888999


Q ss_pred             HHHHHHHHHHhh
Q 043610          418 LVAFMKDFQAKH  429 (430)
Q Consensus       418 ll~~L~~~~~~~  429 (430)
                      .++.|+++++++
T Consensus       360 ~l~rl~~~l~~~  371 (373)
T PRK07324        360 GLKKLSEFLREF  371 (373)
T ss_pred             HHHHHHHHHHhc
Confidence            999999988875

>PRK07908 hypothetical protein; Provisional

Probab=99.91  E-value=3.2e-22  Score=198.77  Aligned_cols=311  Identities=13%  Similarity=0.074  Sum_probs=208.8

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .++++.|+.|.  .++|+.+++++.+.+.+..          .+.+ . .-..++|+.+++++|++++ +|++ ++|+++
T Consensus        21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~Y~~-~-~g~~~lr~aia~~~~~~~~-~I~i-t~Ga~~   86 (349)
T PRK07908         21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLA----------AYPS-T-EDERRARAAVAARHGRTPD-EVLL-LAGAAE   86 (349)
T ss_pred             CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhh----------cCCC-c-cchHHHHHHHHHHhCcChh-hEEE-CCCHHH
Confidence            45566666544  5678899999988764321          1111 0 1234788999999999876 7776 589999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCcccc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~  224 (430)
                      ++..++.  +++| .+++..+++ ...+ ..++..| ++..++..+  ++  .+|++.+  .++++++++++++||||..
T Consensus        87 al~~~~~--l~~~-~viv~~P~y-~~~~-~~~~~~G~~i~~v~~~~--~~--~~d~~~l--~~~~~~i~l~np~NPTG~~  155 (349)
T PRK07908         87 GFALLAR--LRPR-RAAVVHPSF-TEPE-AALRAAGIPVHRVVLDP--PF--RLDPAAV--PDDADLVVIGNPTNPTSVL  155 (349)
T ss_pred             HHHHHHh--cCCC-eEEEeCCCC-hHHH-HHHHHcCCEEEeeccCc--cc--CcChhHh--ccCCCEEEEcCCCCCCCCC
Confidence            9998877  4665 455555444 3333 3556678 777777643  23  3555543  5678999999999999999


Q ss_pred             CC--CCccccCCCcEEEEeccCcC--CCCccccc--cc-c-EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCcccc
Q 043610          225 FK--EYPSAKNSTGILVADMSSNF--CSKPVDVT--RF-G-VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       225 ~p--ei~~~~~~g~~lvvD~a~s~--G~~~idl~--~~-d-~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~  294 (430)
                      ++  +|.++.+++.++++|++++.  ...+..+.  +. + +++.|++|.+|++|  +||+++++++++.+.+...    
T Consensus       156 ~~~~~l~~l~~~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~----  231 (349)
T PRK07908        156 HPAEQLLALRRPGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRA----  231 (349)
T ss_pred             cCHHHHHHHHhcCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCC----
Confidence            99  67776456889999998752  22233332  22 3 56679999999888  6999999998887543211    


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                                ..+.+...+.++...++... ...++.+++++.++++++.+.|.+ .|+++.+  ++ .+ ..+.+.+++
T Consensus       232 ----------~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~--p~-~g-~~~~~~~~~  295 (349)
T PRK07908        232 ----------HWPVGTLQLEAIAACCAPRA-VAEAAADAARLAADRAEMVAGLRA-VGARVVD--PA-AA-PFVLVRVPD  295 (349)
T ss_pred             ----------CCCccHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHHHHHHh-CCcEecc--CC-Cc-eEEEEECCc
Confidence                      01223334444444333100 012567788899999999999987 4776543  11 23 345567763


Q ss_pred             CchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          375 SDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       375 ~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                         ..++.+.|+++||.+.+|...    .++||||++   +++|+++|+++|+++++..
T Consensus       296 ---~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~---~~~~~~~l~~al~~~~~~~  348 (349)
T PRK07908        296 ---AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR---PRAEVPVLVQALAEILKAG  348 (349)
T ss_pred             ---HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC---CCccHHHHHHHHHHHHhcc
Confidence               336888888999998876432    468999996   7899999999999987653

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.91  E-value=3.4e-22  Score=199.20  Aligned_cols=313  Identities=13%  Similarity=0.110  Sum_probs=210.1

Q ss_pred             CCCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      ...++.++.|  |.++|+.+++++.+.+...          ..+...  . ..++|+.++++++++++ +|++ ++|+++
T Consensus        19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~----------~~y~~~--~-~~~lr~~ia~~~~~~~~-~i~i-t~Ga~~   83 (356)
T PRK08056         19 PDQLLDFSANINPLGMPVSLKRAIIDNLDCA----------ERYPDV--E-YRHLHQALARHHQVPAS-WILA-GNGETE   83 (356)
T ss_pred             hhhEEEeccccCCCCCCHHHHHHHHHHHHhc----------ccCcCc--c-HHHHHHHHHHHhCcChh-hEEE-CCCHHH
Confidence            4456666655  4678899999998776431          111111  1 56899999999999876 7776 578999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCccc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~  223 (430)
                      ++..++..+ .+|+ +++..+++..+  ...++..| ++..++..++  .+..+|.+.++ +.+++++|++++++||||.
T Consensus        84 ~l~~~~~~l-~~g~-viv~~P~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~~~~~~~~~~~~~k~v~l~~p~NPTG~  157 (356)
T PRK08056         84 SIFAVVSGL-KPRR-AMIVTPGFAEY--RRALQQVGCEIRRYSLREA--DGWQLTDAILEALTPDLDCLFLCTPNNPTGL  157 (356)
T ss_pred             HHHHHHHHh-CCCC-EEEeCCCcHHH--HHHHHHcCCeEEEEecccc--cCCCccHHHHHhccCCCCEEEEeCCcCCCCC
Confidence            999988876 6775 66566554432  34566778 8888876432  23234422234 6788999999999999999


Q ss_pred             cCC--C---Cccc-cCCCcEEEEeccCc-CC--CC-ccc-cccc--cEEEeCCCccccCCc--cEEEEEc-HHHHhccCC
Q 043610          224 EFK--E---YPSA-KNSTGILVADMSSN-FC--SK-PVD-VTRF--GVIYAGAQKNVGPSG--VTIVIVR-KDLLGNAQD  287 (430)
Q Consensus       224 ~~p--e---i~~~-~~~g~~lvvD~a~s-~G--~~-~id-l~~~--d~~~~s~~K~~gp~G--~g~l~v~-~~~~~~~~~  287 (430)
                      .++  +   |.++ +++++++++|+++. +.  .. .++ +...  .+++.|++|++|++|  +||++.+ +++++.+..
T Consensus       158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~  237 (356)
T PRK08056        158 LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRR  237 (356)
T ss_pred             CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHH
Confidence            999  3   4443 57899999999863 21  11 111 2333  378899999999888  9999884 566555422


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..              ...+.+...++++..+++.   .......++++++.++++.+.|++..|+.+.+   + .+. -
T Consensus       238 ~~--------------~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~---~-~~~-~  295 (356)
T PRK08056        238 QQ--------------MPWSINAFAALAGEVILQD---RAYQQATWQWLAEEGARFYQALCALPLLTVWP---G-RAN-Y  295 (356)
T ss_pred             hC--------------CCCchhHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC---C-CCc-E
Confidence            10              1124455566666556542   11245667888889999999998744766542   1 122 2


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.++.  .+.++.+.|.++||.+.+|...    .++||||++   +.++.++++++|+++++.
T Consensus       296 ~~~~~~~--~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~  355 (356)
T PRK08056        296 LFLRCER--PDIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLLAALRNVLTG  355 (356)
T ss_pred             EEEEcCC--ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHHHHHHHHcc
Confidence            3345542  1347999999999998765422    358999997   689999999999998754

>PLN00175 aminotransferase family protein; Provisional

Probab=99.91  E-value=6.6e-22  Score=200.81  Aligned_cols=326  Identities=14%  Similarity=0.084  Sum_probs=221.9

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT  144 (430)
                      ..+++|+.|-  .+.|+.+++++.+.+.+    +...|..   .....++.+.+.+.+.+.+|.  +++.+|++ ++|++
T Consensus        54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~----~~~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~v-t~G~~  125 (413)
T PLN00175         54 HGAINLGQGFPNFDGPDFVKEAAIQAIRD----GKNQYAR---GFGVPELNSAIAERFKKDTGLVVDPEKEVTV-TSGCT  125 (413)
T ss_pred             CCeEecCCCCCCCCCCHHHHHHHHHHHhc----CCCCcCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEE-eCCHH
Confidence            3578888765  24577888888887753    1111211   122334444555566665564  34324665 58899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +|+..++.++++|||+|++.++.+..+  ...++..| +++.++...+ ++  .+|+++++  +.+++|+|++++++|||
T Consensus       126 ~al~~~~~~l~~~gd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~~~~-~~--~~~~~~l~~~~~~~~k~i~i~~p~NPt  200 (413)
T PLN00175        126 EAIAATILGLINPGDEVILFAPFYDSY--EATLSMAGAKIKTVTLRPP-DF--AVPEDELKAAFTSKTRAILINTPHNPT  200 (413)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCchhH--HHHHHHcCCEEEEEECCcc-cC--CCCHHHHHHhcCcCceEEEecCCCCCC
Confidence            999999999999999999887765543  23456678 8888877532 23  46788887  67889999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcCCCC---ccc---ccc-cc--EEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNFCSK---PVD---VTR-FG--VIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~id---l~~-~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      |.+++  +   |.++ +++++++++|+++.....   ...   +.. .+  +++.|++|.+|.+|  +|++++++++++.
T Consensus       201 G~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~  280 (413)
T PLN00175        201 GKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWG  280 (413)
T ss_pred             CcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHH
Confidence            99998  3   4444 578999999998764321   112   222 12  78899999999888  8999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +....            .....+.+.+.++++..+|+.-.  ..++..++++++.++.+.+.|.+ .|+.+.+  +  ..
T Consensus       281 l~~~~------------~~~~~~~s~~~Q~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--p--~g  341 (413)
T PLN00175        281 VRQAH------------SFLTFATATPMQWAAVAALRAPE--SYYEELKRDYSAKKDILVEGLKE-VGFKVYP--S--SG  341 (413)
T ss_pred             HHHHH------------hhccCCCCHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHH-CCCeecC--C--Ce
Confidence            43210            01123556777888887775321  23677888999999999999997 5776542  2  12


Q ss_pred             cceEEEEcCCCch--hHHHHHHHH-HcCCeecCCCCC-------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          365 FMNVPFTLEKSDL--EAEFVKEAA-KEKMVQLKGHRS-------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       365 ~~iv~f~~~~~~~--~~~~~~~L~-~~Gi~~~~g~~~-------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...+.+.+++.+.  +.+|++.|. ++||.+.+|...       .++|||+++.  ++++++..++.|+++++|
T Consensus       342 ~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~~rL~~~~~~  413 (413)
T PLN00175        342 TYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAVERMKTKLKR  413 (413)
T ss_pred             eEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHHHHhC
Confidence            2234445532122  347888875 679998886421       3479999984  799999999999998865

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.91  E-value=7.4e-22  Score=196.34  Aligned_cols=302  Identities=15%  Similarity=0.147  Sum_probs=209.7

Q ss_pred             CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      .+.++|+.+++++.+.+...   .     .+.+...   ...++|+.++++++++++ +|+++ +|+++++..++..+++
T Consensus        32 ~~~~~p~~~~~a~~~~~~~~---~-----~~~y~~~---~~~~lr~~ia~~~~~~~~-~i~it-~G~~~~l~~~~~~l~~   98 (351)
T PRK14807         32 TPFELPEEVIKNIQEIVKSS---Q-----VNIYPDP---TAEKLREELARYCSVVPT-NIFVG-NGSDEIIHLIMLAFIN   98 (351)
T ss_pred             CCCCCCHHHHHHHHHHhhcC---c-----ccCCCCc---cHHHHHHHHHHHhCCCcc-cEEEe-cCHHHHHHHHHHHhcC
Confidence            45678899999998876421   1     1122211   135789999999999875 77764 7899999999999899


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccccCC--CCcc
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGVEFK--EYPS  230 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~~~p--ei~~  230 (430)
                      +||+|++..+.+...  ...++..| +++.++..+  ++  .+|+++++  ++ .++++|++++++||||..++  ++.+
T Consensus        99 ~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~--~~--~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~  172 (351)
T PRK14807         99 KGDVVIYPHPSFAMY--SVYSKIAGAVEIPVKLKE--DY--TYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIK  172 (351)
T ss_pred             CCCEEEEeCCChHHH--HHHHHHcCCeEEEeecCC--CC--CCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence            999999877654432  33456678 777777642  23  36778876  55 48999999999999999999  6777


Q ss_pred             c-cCCCcEEEEeccCc-C-CCCccc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcC
Q 043610          231 A-KNSTGILVADMSSN-F-CSKPVD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENN  302 (430)
Q Consensus       231 ~-~~~g~~lvvD~a~s-~-G~~~id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~  302 (430)
                      + ++++.++++|+++. + +..... ++..+  +++.|++|.+|++|  +|+++.++++++.+.....            
T Consensus       173 l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~------------  240 (351)
T PRK14807        173 IIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKS------------  240 (351)
T ss_pred             HHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccC------------
Confidence            5 45567899999874 2 111111 22223  78899999999889  8999998888776432110            


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHH
Q 043610          303 SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFV  382 (430)
Q Consensus       303 ~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~  382 (430)
                        ....+...+.++..+|+.    +.+++..++..++++.+.+.|.+..|+.+.+   + .+. .+.+.+++   ..++.
T Consensus       241 --~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~---~-~~~-~~~i~~~~---~~~~~  306 (351)
T PRK14807        241 --PYNINSLSQVIALKVLRT----GVLKERVNYILNERERLIKELSKIPGIKVYP---S-KTN-FILVKFKD---ADYVY  306 (351)
T ss_pred             --CCCcCHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHhCCCcEECc---C-Ccc-EEEEEcCC---HHHHH
Confidence              123355666766666652    2356666777888888999998655776542   1 132 34455552   34688


Q ss_pred             HHHHHcCCeecCCC---CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          383 KEAAKEKMVQLKGH---RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       383 ~~L~~~Gi~~~~g~---~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +.|.++||.+....   ...+++|||++   +.++.++|+++|++++
T Consensus       307 ~~l~~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~  350 (351)
T PRK14807        307 QGLLERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKELL  350 (351)
T ss_pred             HHHHHCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence            88989999875532   22468999998   6899999999998864

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.91  E-value=4.5e-22  Score=204.27  Aligned_cols=300  Identities=13%  Similarity=0.084  Sum_probs=203.3

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-CCCCcEEEEeCChhHHH--HHHHHHHhC-CceEE
Q 043610          111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-TPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVI  186 (430)
Q Consensus       111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v  186 (430)
                      ....+.+.+.++.+++++|.+.+ +++++ +|+|+++++++.++. .+||+|++....+.++.  +...++..| +++.+
T Consensus       108 ~g~~~~~~e~~~~la~l~g~~~~-~v~~~-~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v  185 (447)
T PRK00451        108 QGTLQAIFEYQTMICELTGMDVA-NASMY-DGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEV  185 (447)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCcc-eEEec-CcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEe
Confidence            44567777888899999999876 66664 789999999888874 78999998776654432  222344567 77777


Q ss_pred             ecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEE--eccCcCCCCccc-cccccE
Q 043610          187 WSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVA--DMSSNFCSKPVD-VTRFGV  258 (430)
Q Consensus       187 ~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvv--D~a~s~G~~~id-l~~~d~  258 (430)
                      +..+    + .+|+++++  +++++++|+++++ |+||.+.|  +|.++ +++|+++++  |.. ++|..+.. --..|+
T Consensus       186 ~~~~----~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~~~~~~D~  258 (447)
T PRK00451        186 PYED----G-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPPGEYGADI  258 (447)
T ss_pred             cCCC----C-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCcccCCCCE
Confidence            7642    3 57888887  7889999999997 88999999  78886 788999988  654 45554321 113489


Q ss_pred             EEeCCCcc-----ccCCccEEEEEcHHHHhccCCCC-----------Cccccccchhh-cCCCCCCccHH---HH--HHH
Q 043610          259 IYAGAQKN-----VGPSGVTIVIVRKDLLGNAQDKT-----------PLMLDYKIHDE-NNSLYNTPPCY---CI--YMC  316 (430)
Q Consensus       259 ~~~s~~K~-----~gp~G~g~l~v~~~~~~~~~~~~-----------p~~~~~~~~~~-~~~~~~T~~~~---~~--~a~  316 (430)
                      +++++|||     +|.+|+|++++++++++.+.+..           .+.+....... .....+|.+..   .+  .++
T Consensus       259 ~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa  338 (447)
T PRK00451        259 VVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAA  338 (447)
T ss_pred             EEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHH
Confidence            99999997     55448999999999988743210           00000000000 00111233221   12  333


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCee-cCC
Q 043610          317 GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQ-LKG  395 (430)
Q Consensus       317 ~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~-~~g  395 (430)
                      ..+++++.+ .|++++.+++.+++++++++|.+..|+++.  .... . ..+++.++.  ...++.++|.++||+. .++
T Consensus       339 a~~l~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~-~-~~~~v~~~~--~~~~~~~~L~~~gi~~~~~~  411 (447)
T PRK00451        339 AIYMSLLGP-EGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPF-F-NEFVVRLPK--PAEEVNEALLEKGILGGYDL  411 (447)
T ss_pred             HHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCe-E-EEEEEecCC--CHHHHHHHHHhcCCCCCccc
Confidence            345665543 489999999999999999999975577764  1111 1 123345431  1347999999998873 222


Q ss_pred             CC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          396 HR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       396 ~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ..    ..+.+|+|++.++|++||++++++|++++
T Consensus       412 ~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        412 GRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             ccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            11    13579999999999999999999999875

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.91  E-value=2.5e-22  Score=200.33  Aligned_cols=308  Identities=14%  Similarity=0.119  Sum_probs=209.6

Q ss_pred             CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ..+++++.|  +.++++.+++++.+.+.++.          .+...   ...++|+.+++++|++++ +++++++|++++
T Consensus        34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~y~~~---~~~~lr~~ia~~~~~~~~-~i~~~~~Ga~~~   99 (361)
T PRK00950         34 ESIIKLGSNENPLGPSPKAVEAIEKELSKIH----------RYPEP---DAPELREALSKYTGVPVE-NIIVGGDGMDEV   99 (361)
T ss_pred             cceEEccCCCCCCCCCHHHHHHHHHHHHhhc----------CCCCC---CHHHHHHHHHHHhCCCHH-HEEEeCCCHHHH
Confidence            366777655  56678889999887765321          11111   125788999999999876 677745788899


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      +..++..++++||+|++..+.+...  ...++..| +++.++...  ++  .+|+++++  +++++++|++++++|+||.
T Consensus       100 i~~~~~~~~~~gd~vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~--~~--~~~~~~l~~~~~~~~~~v~~~~p~nptG~  173 (361)
T PRK00950        100 IDTLMRTFIDPGDEVIIPTPTFSYY--EISAKAHGAKPVYAKREE--DF--SLDVDSVLNAITEKTKVIFLCTPNNPTGN  173 (361)
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHH--HHHHHHcCCEEEEeecCC--CC--CcCHHHHHHHhccCCCEEEEeCCCCCCCC
Confidence            9988888888999988776654332  23455667 777776432  23  46788876  6778999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCC-Cc-cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCS-KP-VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLML  293 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~-~~-id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~  293 (430)
                      ++|  ++.++ +++|+++++|+++.... .+ .. +.+.+  +++.|++|.+|.+|  +|+++.++++++.+.....   
T Consensus       174 ~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~---  250 (361)
T PRK00950        174 LIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKT---  250 (361)
T ss_pred             CcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcC---
Confidence            999  77776 57899999999985322 11 11 12234  67789999999888  8999999888765432111   


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                                 ..+.+.+.+.++..+++.   .+.++...++.+++++++.+.|.    +.+.+   + .+ ..+.+.++
T Consensus       251 -----------~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~r~~l~~~l~----~~~~~---~-~~-~~i~~~~~  307 (361)
T PRK00950        251 -----------PFSLTRLSQAAAIAALSD---KEYIEKSIEHGIKSREYLYNELP----FKVYP---S-EA-NFVLVDVT  307 (361)
T ss_pred             -----------CCCCCHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhhcC----eeECC---C-cc-eEEEEECC
Confidence                       112445556655556542   11245666777777777766654    33332   1 23 24556664


Q ss_pred             CCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          374 KSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       374 ~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      + ....++.+.|.++||.+.+|..    ..+++|||++   +.+++++++++|++++
T Consensus       308 ~-~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il  360 (361)
T PRK00950        308 P-MTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV  360 (361)
T ss_pred             C-CCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence            3 2233799999999999876532    1357999988   7889999999999875

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.90  E-value=2.5e-22  Score=200.14  Aligned_cols=311  Identities=13%  Similarity=0.132  Sum_probs=216.7

Q ss_pred             CCceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ..++.++.  .|.++|+.+++++.+.+.+..        ...+...   -..++|+.+++++|.+++.+|++ ++|++++
T Consensus        26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~---~~~~lr~~ia~~~~~~~~~~I~~-t~G~~~~   93 (356)
T PRK04870         26 TGMVKLDAMENPYRLPAELRAELGERLAEVA--------LNRYPDP---RAAALKAALRAAMGVPAGADVLL-GNGSDEL   93 (356)
T ss_pred             CCceeCcCCCCCCCCCHHHHHHHHHHhhccc--------cccCCCC---CHHHHHHHHHHHhCcCCCCcEEE-cCCHHHH
Confidence            34555544  456789999999998774210        1112111   13578899999999865335665 5789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEEEEeecCCCcc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANETIHG  222 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t~tG  222 (430)
                      +..++..++++||+|++..+++..+  ...++..| +++.++..+  ++  .+|+++++  + ..++++|++++++||||
T Consensus        94 i~~~~~~~~~~gd~vlv~~P~y~~~--~~~~~~~g~~~~~i~~~~--~~--~~d~~~l~~~~~~~~~~~v~l~~p~NPtG  167 (356)
T PRK04870         94 IQLLALACAKPGATVLAPEPGFVMY--RMSAKLAGLEFVGVPLTA--DF--TLDLPAMLAAIAEHRPALVFLAYPNNPTG  167 (356)
T ss_pred             HHHHHHHhcCCCCEEEECCCCHHHH--HHHHHHcCCEEEEecCCC--CC--CCCHHHHHHHhhcCCCCEEEEcCCCCCCC
Confidence            9999888889999999877766543  34566778 777777642  23  47888886  5 45899999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCc-CCCCcc--cccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCcc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSN-FCSKPV--DVTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLM  292 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s-~G~~~i--dl~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~  292 (430)
                      ..++  ++.++ ...++++++|+++. +.....  .+...+  +++.|++| +|++|  +|+++.++++++.+.....  
T Consensus       168 ~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~--  244 (356)
T PRK04870        168 NLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRP--  244 (356)
T ss_pred             CCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccC--
Confidence            9999  55554 22278999999864 432111  223333  78899999 88888  9999999988876532110  


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                                  ..+.+...+.++..+++..   +.++...++++++++++.+.|++..|+.+.+   . .+ ..+.+.+
T Consensus       245 ------------~~~~~~~~q~~a~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~---~-~~-~~~~~~~  304 (356)
T PRK04870        245 ------------PYNVNVLTQATALFALEHV---DVLDAQAAQLRAERTRLAAALAALPGVTVFP---S-AA-NFILVRV  304 (356)
T ss_pred             ------------CCcCCHHHHHHHHHHHhCH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC---C-CC-eEEEEEC
Confidence                        1234556666666666532   1367778888899999999998755776542   1 23 3455666


Q ss_pred             CCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          373 EKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       373 ~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ++   ..++.+.|.++||.+.++..    ..+++|||++   +.+++++|+++|++++
T Consensus       305 ~~---~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~  356 (356)
T PRK04870        305 PD---AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL  356 (356)
T ss_pred             CC---HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence            52   33688889999999876532    2458999998   7999999999998763

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.90  E-value=6.6e-22  Score=200.80  Aligned_cols=321  Identities=12%  Similarity=0.067  Sum_probs=208.2

Q ss_pred             ceeecC---CCCCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           71 VFNFAA---GPANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        71 ~~l~~~---gp~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      .++|..   -+...++.|++++.+.+..+. +.+.|.   ..  ........++++.|++++|.++  . +++ ++|+++
T Consensus        48 ~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~---~~--~~~~~~~~~Le~~la~~~g~~~--~-i~~-~sG~~a  118 (410)
T PRK13392         48 VTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTR---NI--SGTSHPHVLLERELADLHGKES--A-LLF-TSGYVS  118 (410)
T ss_pred             EEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhh---hc--ccChHHHHHHHHHHHHHhCCCC--E-EEE-CcHHHH
Confidence            444444   234568899999999887642 122111   01  1112345688999999999742  4 444 457888


Q ss_pred             HHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccc-cc-c-CCCccEEEEeecCCC
Q 043610          147 FAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDA-LE-Q-NPDAKYLHICANETI  220 (430)
Q Consensus       147 ~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~-l~-i-~~~~~lv~i~~~~t~  220 (430)
                      +..++..+.  .+||.|+.-...+++  ++..++..| ++..++..      ...++++ ++ . .+++++|++++++|+
T Consensus       119 ~~~~i~~l~~~~~g~~vi~~~~~h~s--~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~  190 (410)
T PRK13392        119 NDAALSTLGKLLPGCVILSDALNHAS--MIEGIRRSGAEKQVFRHN------DLADLEEQLASVDPDRPKLIAFESVYSM  190 (410)
T ss_pred             HHHHHHHHhcCCCCCEEEEehhhhHH--HHHHHHHcCCeEEEEeCC------CHHHHHHHHHhccCCCCEEEEEeCCCCC
Confidence            888777664  378765532222333  233444556 55444321      1112222 22 2 468999999999999


Q ss_pred             ccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------cc-cccccEEEeCCCccccCCccEEEEEcHHHHhccCC
Q 043610          221 HGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VD-VTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQD  287 (430)
Q Consensus       221 tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------id-l~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~  287 (430)
                      ||.+.|  +|.++ +++|+++++|++|++|...         .+ .++.|+++.+++|++|.+| |++..++++++.+..
T Consensus       191 tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G-G~~~~~~~~~~~l~~  269 (410)
T PRK13392        191 DGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG-GYIAASADLIDFVRS  269 (410)
T ss_pred             CcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc-chhhcCHHHHHHHHH
Confidence            999999  78886 6889999999999865421         11 2335788899999999778 888889888775432


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..+.+          ....+.+...++++.++|+.+..   .....+++.++++++++.|++ .|+.+.+  +  .++ +
T Consensus       270 ~~~~~----------~~s~~~~~~~~~a~~aaL~~~~~---~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~~-~  330 (410)
T PRK13392        270 FAPGF----------IFTTALPPAVAAGATAAIRHLKT---SQTERDAHQDRVAALKAKLNA-NGIPVMP--S--PSH-I  330 (410)
T ss_pred             hCcch----------hccCcCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH-cCCCCCC--C--CCC-E
Confidence            21111          01123455667888889987653   235567788889999999987 6876643  1  233 3


Q ss_pred             EEEEcCCCchhHHHHHHHH-HcCCeecCCC---C--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          368 VPFTLEKSDLEAEFVKEAA-KEKMVQLKGH---R--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~---~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.+++.....++.++|. ++||.+.+..   .  ..+++||+++.++|++|+++++++|+++.++
T Consensus       331 ~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~  397 (410)
T PRK13392        331 VPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDR  397 (410)
T ss_pred             EEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence            4455543111236888885 6799976421   1  1247999999999999999999999998764

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.90  E-value=5.1e-22  Score=200.43  Aligned_cols=324  Identities=15%  Similarity=0.128  Sum_probs=215.0

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C--CCCCcEEEEEe
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N--IPQEYSVLFLQ  140 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g--~~~~~~vv~~~  140 (430)
                      +..++|..|-  .+.++.+.+++.+.+.+    +...|..   ....    .++|+.+++++    |  .+++ +++++ 
T Consensus        31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~---~~g~----~~lr~~ia~~~~~~~~~~~~~~-~i~~~-   97 (393)
T PRK05764         31 RDVISLGAGEPDFDTPEHIKEAAIEALDD----GKTKYTP---AAGI----PELREAIAAKLKRDNGLDYDPS-QVIVT-   97 (393)
T ss_pred             CCEEEeCCCCCCCCCCHHHHHHHHHHHhc----CCCCcCC---CCCh----HHHHHHHHHHHHHHhCCCCCHH-HEEEe-
Confidence            3455666543  23457888888777643    1111111   1112    34555555554    4  4454 67765 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      +|+++++..++.+++++||+|++..+++++.  ...++..| ++..++...+  .+..+|+++++  +++++++|+++++
T Consensus        98 ~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~p  173 (393)
T PRK05764         98 TGAKQALYNAFMALLDPGDEVIIPAPYWVSY--PEMVKLAGGVPVFVPTGEE--NGFKLTVEQLEAAITPKTKALILNSP  173 (393)
T ss_pred             CCcHHHHHHHHHHhcCCCCEEEecCCCCcch--HHHHHHcCCEEEEEecCcc--cCCcCCHHHHHHhhCccceEEEEECC
Confidence            7899999999999999999999877776654  34566678 8877776432  22346777877  6788999999999


Q ss_pred             CCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----C--c---c--ccccccEEEeCCCccccCCc--cEEEEEc
Q 043610          218 ETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----K--P---V--DVTRFGVIYAGAQKNVGPSG--VTIVIVR  278 (430)
Q Consensus       218 ~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~--~---i--dl~~~d~~~~s~~K~~gp~G--~g~l~v~  278 (430)
                      +||||.+++  +   |.++ +++|+++++|++++...    .  +   +  +....++++.|++|.+|++|  +|+++.+
T Consensus       174 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~  253 (393)
T PRK05764        174 SNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGP  253 (393)
T ss_pred             CCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecC
Confidence            999999998  3   4443 58999999999875321    1  1   1  22223588899999999778  8999999


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV  358 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~  358 (430)
                      +++++.+....            ......++...++++..+|+..  ...++...+++.++++.+++.|++..|+.+.. 
T Consensus       254 ~~~~~~~~~~~------------~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-  318 (393)
T PRK05764        254 KELIKAMSKLQ------------SHSTSNPTSIAQYAAVAALNGP--QDEVEEMRQAFEERRDLMVDGLNEIPGLECPK-  318 (393)
T ss_pred             HHHHHHHHHHH------------hhcccCCChHHHHHHHHHHcCC--hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC-
Confidence            88877643210            0112244556667776666521  12456778888888999999998744776542 


Q ss_pred             CCCCCccceEEEEcCCCch-----hHHHHHHH-HHcCCeecCCCCC--CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          359 EKSVRSFMNVPFTLEKSDL-----EAEFVKEA-AKEKMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~-----~~~~~~~L-~~~Gi~~~~g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       +  .+...+.+.+++...     +.++.+.| +++||.+.+|...  .+++|||+..  ++++++++++.|++++++|
T Consensus       319 -~--~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~--~~~~~~~~i~~l~~~~~~~  392 (393)
T PRK05764        319 -P--EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT--SLEDLEEGLERIERFLESL  392 (393)
T ss_pred             -C--CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence             1  122233445543111     24687776 5679998876432  4689999975  7999999999999998876

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.90  E-value=1e-21  Score=197.99  Aligned_cols=326  Identities=11%  Similarity=0.091  Sum_probs=213.3

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT~  145 (430)
                      ..+.++.|-  .++|+.+++++.+.+.++...   .|..   .....+..+.+++.+++.+|.+  +++++++ ++|+++
T Consensus        28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~---~Y~~---~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~-t~G~~~  100 (389)
T PRK05957         28 GTISLGQGVVSYPPPPEAIEALNNFLANPENH---KYQA---VQGIPPLLEAITQKLQQDNGIELNNEQAIVV-TAGSNM  100 (389)
T ss_pred             CeEEccCCCCCCCCCHHHHHHHHHHHhCCCCC---CCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE-eCChHH
Confidence            345555543  457889999998877533211   1111   1233456678889999999974  1236766 478999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      ++..++..++++||+|++..+.++.+..  .++..| +++.++...  ++  .+|+++++  +++++++|++++++||||
T Consensus       101 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--~~~~~g~~~~~v~~~~--~~--~~d~~~l~~~i~~~~klv~~~~p~NPtG  174 (389)
T PRK05957        101 AFMNAILAITDPGDEIILNTPYYFNHEM--AITMAGCQPILVPTDD--NY--QLQPEAIEQAITPKTRAIVTISPNNPTG  174 (389)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCCcCHHH--HHHhcCCEEEEeecCC--CC--CcCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence            9999888888999999987777665432  345667 777777632  23  47888887  788899999999999999


Q ss_pred             ccCC--C---Cccc-cCCCcEEEEeccCc---CCCC---c-ccc-cc--ccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          223 VEFK--E---YPSA-KNSTGILVADMSSN---FCSK---P-VDV-TR--FGVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       223 ~~~p--e---i~~~-~~~g~~lvvD~a~s---~G~~---~-idl-~~--~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      ..++  +   |.++ +++|+++++|+++.   ++..   + ..+ +.  .-+++.|++|.+|++|  +|++++++++++.
T Consensus       175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~  254 (389)
T PRK05957        175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEA  254 (389)
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHH
Confidence            9998  3   4443 58899999999864   1211   1 111 11  2378899999999889  9999999998876


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc-eecCCCCCCC
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF-YKCPVEKSVR  363 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~-~~~~~~~~~r  363 (430)
                      +....            .....+++.+.+.++..+|+.-  ...+++..++++++++.+.+.|++..|+ .+.   ++ .
T Consensus       255 ~~~~~------------~~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~---~~-~  316 (389)
T PRK05957        255 IKKIQ------------DTILICPPVVSQYAALGALQVG--KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLH---PA-N  316 (389)
T ss_pred             HHHHH------------hhcccCCCcHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc---CC-C
Confidence            53210            0111244555666666666420  1124666677888888999999864343 322   11 1


Q ss_pred             ccceEEEEcCCCchhHHHHHHHH-HcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          364 SFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ....+.+.++....+.+++++|. ++||.+.+|...    .+++|||++.. +.+++++.++.|.+.++
T Consensus       317 gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~~l~~~~~  384 (389)
T PRK05957        317 GAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIERLVQGLK  384 (389)
T ss_pred             eeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHHHHHHHHH
Confidence            22344466654222337999885 589999887532    34799999743 45555555555555443

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.90  E-value=8.8e-22  Score=198.09  Aligned_cols=325  Identities=16%  Similarity=0.127  Sum_probs=212.3

Q ss_pred             CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCc
Q 043610           67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGG  142 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~g  142 (430)
                      ..++++.++.|-  .++++.+.+++.+.+.+..   ...|...   ....+..+.+.+.+++.+|.+  ++.+|++ ++|
T Consensus        27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~---~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~-t~G   99 (383)
T TIGR03540        27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPE---NHRYPSY---EGMLAYRQAVADWYKRRFGVELDPETEVLS-LIG   99 (383)
T ss_pred             cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCC---CCCCCCC---CCCHHHHHHHHHHHHHhhCCCCCCCCeEEE-CCC
Confidence            345667777654  3457788898887664210   0011110   112233344455555555653  3324555 578


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      +++++..++..++++||+|++..+++..+.  ..++..| ++..++...+  .|..+|+++++  +.+++++|++++++|
T Consensus       100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~--~~~~~~G~~v~~v~~~~~--~g~~~d~~~l~~~~~~~~~~v~i~~P~N  175 (383)
T TIGR03540       100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYR--IGTLFAGGEPYEMPLKEE--NGFLPDFDAIPEDIAKKAKLMFINYPNN  175 (383)
T ss_pred             cHHHHHHHHHHhCCCCCEEEEeCCCCcchH--HHHHhcCCEEEEEecCcc--cCCccCHHHHHhhccccceEEEEeCCCC
Confidence            999999999999999999998887765543  3456678 8877877532  23346788876  677899999999999


Q ss_pred             CccccCC--C---Cccc-cCCCcEEEEeccCcCC----CCcccc---c---cccEEEeCCCccccCCc--cEEEEEcHHH
Q 043610          220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFC----SKPVDV---T---RFGVIYAGAQKNVGPSG--VTIVIVRKDL  281 (430)
Q Consensus       220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G----~~~idl---~---~~d~~~~s~~K~~gp~G--~g~l~v~~~~  281 (430)
                      |||..++  +   |.++ +++|+++++|+++...    ..+..+   .   +..+++.|++|.+|++|  +|+++.++++
T Consensus       176 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l  255 (383)
T TIGR03540       176 PTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADL  255 (383)
T ss_pred             CcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHH
Confidence            9999999  3   4443 5889999999998522    122222   1   12377899999999889  9999999988


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+.....            ....+++.+.+.++..+|+...  ..++.++++++++++.+.+.|++ .|+.+.+  + 
T Consensus       256 ~~~~~~~~~------------~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~--~-  317 (383)
T TIGR03540       256 IAGLGKVKT------------NVDSGVFQAIQYAAIAALNGPQ--DVVKEIRKIYQRRRDLLLEALKK-IGIDVEK--P-  317 (383)
T ss_pred             HHHHHHHHH------------hcccCCChHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHh-CCCEecC--C-
Confidence            776432110            0112344456666666665321  23567788889999999999997 5776653  1 


Q ss_pred             CCccceEEEEcCCCchh-HHHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          362 VRSFMNVPFTLEKSDLE-AEFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~-~~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      . +...+.+.+++ +.+ .++..+| +++||.+.+|..    ..+++|||++.  +++++++.++.|++
T Consensus       318 ~-~~~~~~~~l~~-~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~  382 (383)
T TIGR03540       318 K-ATFYVWVPVPE-GYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV--PDERLEEAVARIKK  382 (383)
T ss_pred             C-cceEEEEECCC-CCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC--CHHHHHHHHHHHhh
Confidence            1 22335566664 333 3788886 578999887642    13579999974  67777777766654

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.90  E-value=9.4e-22  Score=196.91  Aligned_cols=311  Identities=12%  Similarity=0.029  Sum_probs=214.1

Q ss_pred             ceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           71 VFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        71 ~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      .++++.|  +.+.|+.+++++.+.+..+.          ++++..   ..++|+.++++++++++ +|++ ++|+++++.
T Consensus        34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~----------~Y~~~~---~~~Lr~~ia~~~~~~~~-~I~i-t~G~~~~l~   98 (369)
T PRK08153         34 RARIGANESGFGPSPSVIAAMREAAAEIW----------KYGDPE---NHDLRHALAAHHGVAPE-NIMV-GEGIDGLLG   98 (369)
T ss_pred             eeEecCCCCCCCCCHHHHHHHHHHHHHhh----------cCCCCc---cHHHHHHHHHHhCCCHH-HEEE-cCCHHHHHH
Confidence            3466654  46778899999887654211          111111   35888999999999875 7776 478999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEEEEeecCCCcccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANETIHGVE  224 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t~tG~~  224 (430)
                      .++..+++|||.|++..+++....  ..++..| ++..++...   .  .+|++++.  + .+++++|++++++||||.+
T Consensus        99 ~~~~~~~~~gd~vlv~~p~y~~~~--~~~~~~g~~~~~vp~~~---~--~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~  171 (369)
T PRK08153         99 LIVRLYVEPGDPVVTSLGAYPTFN--YHVAGFGGRLVTVPYRD---D--REDLDALLDAARRENAPLVYLANPDNPMGSW  171 (369)
T ss_pred             HHHHHhcCCCCEEEECCCcchHHH--HHHHHcCCeEEEeeCCC---C--CCCHHHHHHHhcccCCcEEEEeCCCCCCCCC
Confidence            999988899999987666554432  2344567 777777632   2  35677764  3 5689999999999999999


Q ss_pred             CC--CCccc---cCCCcEEEEeccCc-CCCC--cccccc-cc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCc
Q 043610          225 FK--EYPSA---KNSTGILVADMSSN-FCSK--PVDVTR-FG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPL  291 (430)
Q Consensus       225 ~p--ei~~~---~~~g~~lvvD~a~s-~G~~--~idl~~-~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~  291 (430)
                      ++  ++.++   .++++++++|++++ ++..  ...+.. .+  +++.|++|.+|.+|  +|+++.++++++.+....  
T Consensus       172 ~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~--  249 (369)
T PRK08153        172 HPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVR--  249 (369)
T ss_pred             CCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhh--
Confidence            99  44443   34689999999864 2211  112221 12  78899999999889  799999988876543211  


Q ss_pred             cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                                  ...+.+.+.++++..+|+.   ..-++.++++.++.++.+.+.|++ .|+...+    ..+. .+.+.
T Consensus       250 ------------~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~~~~~L~~-~g~~~~p----~~~~-f~~~~  308 (369)
T PRK08153        250 ------------NHFGMNRIAQAAALAALKD---QAYLAEVVGKIAAARDRIAAIARA-NGLTPLP----SATN-FVAID  308 (369)
T ss_pred             ------------cCCCCCHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHH-CCCccCC----CcCc-EEEEE
Confidence                        0134577788888888852   113567788888899999999986 6775432    1232 33445


Q ss_pred             cCCCc-hhHHHHHHHHHcCCeec-CCCC-CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          372 LEKSD-LEAEFVKEAAKEKMVQL-KGHR-SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       372 ~~~~~-~~~~~~~~L~~~Gi~~~-~g~~-~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ++... ...++.++|.++||.+. ++.. ..+++|||+.   +++|+++++++|++++..+
T Consensus       309 ~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~  366 (369)
T PRK08153        309 CGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAA  366 (369)
T ss_pred             CCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence            54211 22368888889999984 5432 2358999988   7999999999999987654

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.90  E-value=5.6e-22  Score=197.78  Aligned_cols=306  Identities=15%  Similarity=0.152  Sum_probs=214.7

Q ss_pred             CceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           70 RVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+++|+.|  |..+++.+++++.+.+....          ++..   .-..++|+.++++++++++ +|++ ++|+++++
T Consensus        30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~----------~~p~---~g~~~lr~~ia~~~~~~~~-~i~~-t~G~~~~l   94 (359)
T PRK03158         30 KIVKLASNENPYGPSPKVKEAIAAHLDELA----------LYPD---GYAPELRTKVAKHLGVDEE-QLLF-GAGLDEVI   94 (359)
T ss_pred             ceEEecCCCCCCCCCHHHHHHHHHHHHHhh----------cCCC---CcHHHHHHHHHHHhCCCHH-HEEE-CCCHHHHH
Confidence            45566543  44567889999887764311          1111   1245788999999999775 7776 57899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~  224 (430)
                      ..++.+++++||+|++..+.+.+..  ..++..| ++..++..   ++  .+|+++++  +++++++|++++++||||..
T Consensus        95 ~~~~~~~~~~gd~v~~~~p~y~~~~--~~~~~~g~~~~~~~~~---~~--~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~  167 (359)
T PRK03158         95 QMISRALLNPGTNTVMAEPTFSQYR--HNAIIEGAEVREVPLK---DG--GHDLEAMLKAIDEQTKIVWICNPNNPTGTY  167 (359)
T ss_pred             HHHHHHHhCCCCEEEEcCCCHHHHH--HHHHHcCCeEEEEecC---CC--CcCHHHHHHhcCCCCCEEEEeCCCCCCCCC
Confidence            9998888899999998776655432  3455567 77777764   13  36777775  67899999999999999999


Q ss_pred             CC--CCccc---cCCCcEEEEeccCcCCC----Ccc--c-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCC
Q 043610          225 FK--EYPSA---KNSTGILVADMSSNFCS----KPV--D-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       225 ~p--ei~~~---~~~g~~lvvD~a~s~G~----~~i--d-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~  288 (430)
                      ++  ++.++   .++|+++++|+++....    .+.  . ++..+  +++.|++|.+|++|  +||++.++++++.+...
T Consensus       168 ~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~  247 (359)
T PRK03158        168 VNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIA  247 (359)
T ss_pred             CCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHh
Confidence            99  55554   24689999999975322    111  1 12223  77899999999889  59999999988765321


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      ..             . ...|...+.++..+|+.-   .-++.+.+++++.++.+.+.|.+ .|+...+  +  .+. .+
T Consensus       248 ~~-------------~-~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~--~--~g~-~i  304 (359)
T PRK03158        248 RP-------------P-FNTTRIAQYAAIAALEDQ---AFLKECVEKNAEGLEQYYAFCKE-YGLFYYP--S--QTN-FI  304 (359)
T ss_pred             cC-------------C-CCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHH-CCCeeCC--C--cCc-EE
Confidence            11             1 234667777777777521   13566777788888889999987 4776543  1  122 34


Q ss_pred             EEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       369 ~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .+.++.  .+.++.+.|.++||.+.+|..  ..+++||+++   +.+|+++++++|+++
T Consensus       305 ~~~~~~--~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~  358 (359)
T PRK03158        305 FVDTGR--DANELFEALLKKGYIVRSGAALGFPTGVRITIG---LKEQNDKIIELLKEL  358 (359)
T ss_pred             EEECCC--CHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence            445432  234789999889999988743  2468999987   799999999999886

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.90  E-value=1.7e-21  Score=201.09  Aligned_cols=330  Identities=12%  Similarity=0.023  Sum_probs=212.3

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH-H--Hh-hc
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA-V--PL-NL  154 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~-~--~~-sl  154 (430)
                      ...|+.+.+++.+.-. |  .+..+|.....++...+.+.++++.+++++|.+.  ..+. .++|+.+... +  +. .+
T Consensus        80 ~~~~p~i~~~~~~~~~-~--~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~--~~l~-~~~GA~a~~~~l~~~r~~~  153 (481)
T PRK04366         80 MKYNPKINEKVARLPG-F--AELHPLQPEETVQGALELMYELQEWLKEITGMDA--VTLQ-PAAGAHGELTGLLMIRAYH  153 (481)
T ss_pred             CCCCHHHHHHHHhCcc-h--hcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCc--eEEE-eCcHHHHHHHHHHHHHHHh
Confidence            4677788888776421 2  1222221112345677889999999999999974  3333 3445444332 2  22 23


Q ss_pred             CCCCC----cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc-CC
Q 043610          155 CTPND----PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE-FK  226 (430)
Q Consensus       155 ~~~gd----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~-~p  226 (430)
                      ..+||    +|++....|.++.  ..++..| +++.++...   .+ .+|+++++  +++++++|++++++ +||.+ .|
T Consensus       154 ~~~Gd~~~~~Vlv~~~~hp~~~--~~~~~~G~~vv~v~~~~---~~-~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~d  226 (481)
T PRK04366        154 EARGDTKRTEVIVPDSAHGTNP--ASAAMAGFKVVEIPSNE---DG-LVDLEALKAAVGEDTAALMLTNPN-TLGLFERN  226 (481)
T ss_pred             hccCcCCCCEEEEcCCccHhHH--HHHHHcCCEEEEeecCC---CC-CcCHHHHHhhcccCCeEEEEeCCC-CccccchH
Confidence            46666    8887776665543  2355668 888887742   23 57888887  78899999999876 89977 35


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCC-ccccccc--cEEEeCCCcccc-CC-----ccEEEEEcHHHHhccCCCC-----
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSK-PVDVTRF--GVIYAGAQKNVG-PS-----GVTIVIVRKDLLGNAQDKT-----  289 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~-~idl~~~--d~~~~s~~K~~g-p~-----G~g~l~v~~~~~~~~~~~~-----  289 (430)
                        +|+++ +++|++++||++|..+.. .++..++  |++++++|||+| |.     |+|++++++++...+....     
T Consensus       227 l~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g  306 (481)
T PRK04366        227 ILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDG  306 (481)
T ss_pred             HHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccC
Confidence              67775 689999999999975533 2344444  899999999995 64     4679999998877653210     


Q ss_pred             -Ccccccc-c-hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          290 -PLMLDYK-I-HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       290 -p~~~~~~-~-~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                       .+.+++. . +.+ ....+|.+...+.++...+..+-. .|++++.+++.+++++++++|.+.  +.+.. +.. .. .
T Consensus       307 ~~~~l~~~r~~~i~-r~~a~t~~~l~~~~a~~~l~~~G~-~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~-~~~-~~-~  379 (481)
T PRK04366        307 DRYRLDYDRPKSIG-RVRAFYGNFGVLVRAYAYIRSLGA-EGLREVSEDAVLNANYLKARLKDI--YDLPY-DRP-CM-H  379 (481)
T ss_pred             CceeecccccccCC-CcccccCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhHhh--CcccC-CCC-ee-E
Confidence             1122221 0 111 122345555555555555655543 478888899999999999999874  33321 111 11 1


Q ss_pred             eEEEEcC---CCchhH-HHHHHHHHcCCeecCCC---CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          367 NVPFTLE---KSDLEA-EFVKEAAKEKMVQLKGH---RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       367 iv~f~~~---~~~~~~-~~~~~L~~~Gi~~~~g~---~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.|..+   ..+.+. ++.++|.++||....-.   ...+.+|+|++-++|++|||+++++|+++.++
T Consensus       380 ~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~  448 (481)
T PRK04366        380 EFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEE  448 (481)
T ss_pred             EEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHH
Confidence            2333322   012233 79999999998854211   11357999999999999999999999988653

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.90  E-value=8.1e-22  Score=198.91  Aligned_cols=329  Identities=12%  Similarity=0.111  Sum_probs=214.2

Q ss_pred             CCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT  144 (430)
                      +.+++++.|..  ++++.+++++.+.+.+    +...|...   ....+..+.+.+.+.+.+|  ++++ +|+++ +|++
T Consensus        33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~---~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~~  103 (391)
T PRK08361         33 ENVISLGIGEPDFDTPKNIKEAAKRALDE----GWTHYTPN---AGIPELREAIAEYYKKFYGVDVDVD-NVIVT-AGAY  103 (391)
T ss_pred             cCeEEcCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCC---CCcHHHHHHHHHHHHHHhCCCCCcc-cEEEe-CChH
Confidence            45677776542  3467888888776542    11111111   1122223344444444445  4454 67765 7899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +++..++.+++++||+|++..+++.+.  ...++..| +++.++...+.  +..+|+++++  +++++++|++++++|||
T Consensus       104 ~al~~~~~~l~~~g~~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~~--~~~~d~~~l~~~i~~~~~~v~i~~p~NPt  179 (391)
T PRK08361        104 EATYLAFESLLEEGDEVIIPDPAFVCY--VEDAKIAEAKPIRIPLREEN--EFQPDPDELLELITKRTRMIVINYPNNPT  179 (391)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCccc--HHHHHHcCCEEEEEecCCcc--CCCCCHHHHHHhcccccEEEEEeCCCCCC
Confidence            999999999999999999888776553  24455667 77777764321  2247888886  67889999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cccccc----cccEEEeCCCccccCCc--cEEEEEcHHHHhcc
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVT----RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNA  285 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~----~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~  285 (430)
                      |..+|  +   |.++ +++++++++|++++...    ....+.    +..+++.|++|.+|++|  +|++++++++++.+
T Consensus       180 G~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~  259 (391)
T PRK08361        180 GATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDM  259 (391)
T ss_pred             CcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHH
Confidence            99999  3   4443 58899999999875321    111121    12478899999999889  99999998887754


Q ss_pred             CCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610          286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF  365 (430)
Q Consensus       286 ~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~  365 (430)
                      ....+            ...++.+...+.++..+|+.-.....++.++++++++++.+.+.|++..|+.+.+  +  ...
T Consensus       260 ~~~~~------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~--p--~g~  323 (391)
T PRK08361        260 IKLHA------------YIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFE--P--KGA  323 (391)
T ss_pred             HHHHh------------hhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecC--C--CEE
Confidence            22111            0112345555666666664211011367888899999999999998744665542  1  122


Q ss_pred             ceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC--C--CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          366 MNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR--S--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       366 ~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~--~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+.+.+++.+.+. ++.+.|. ++||.+.+|..  .  .+++||+++.  +++++++.++.|++++++
T Consensus       324 ~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~~~l~~  390 (391)
T PRK08361        324 FYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT--SKEKLIEAMERMEKALEE  390 (391)
T ss_pred             EEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence            33445666322333 7888775 57999988653  1  3589999985  678899999999888754

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.90  E-value=1.2e-21  Score=197.25  Aligned_cols=326  Identities=16%  Similarity=0.121  Sum_probs=211.0

Q ss_pred             CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCc
Q 043610           67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGG  142 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~g  142 (430)
                      ..++++.++.|-  .++++.+++++.+.+.+..   ...|..   .....+..+.+.+.+.+.+|.  +++.+|++ ++|
T Consensus        29 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~-t~G  101 (385)
T PRK09276         29 RGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPE---NHQYPS---YEGMLEFRKAVADWYKRRFGVELDPETEVIS-LIG  101 (385)
T ss_pred             cCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCC---CCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE-ccC
Confidence            345567776654  3467788888887764311   001110   011223333444444444464  34323554 578


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      +++++..++..+++|||+|++..++++.+.  ..++..| +++.++...+  .|..+|+++++  +.+++++|++++++|
T Consensus       102 ~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~--~~~~~~g~~~~~v~~~~~--~g~~~d~~~l~~~~~~~~~~v~l~~p~N  177 (385)
T PRK09276        102 SKEGIAHIPLAFVNPGDVVLVPDPGYPVYK--IGTIFAGGEPYFMPLKEE--NGFLPDLDAIPEDVAKKAKLMFINYPNN  177 (385)
T ss_pred             cHHHHHHHHHHhCCCCCEEEEcCCCCcChH--HHHHHcCCEEEEEecCCC--CCCcCCHHHHHHhccccceEEEEeCCCC
Confidence            999999999999999999998887765543  2455678 7777776432  23346777775  677899999999999


Q ss_pred             CccccCC--C---Cccc-cCCCcEEEEeccCcCC----CCccc---ccc---ccEEEeCCCccccCCc--cEEEEEcHHH
Q 043610          220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFC----SKPVD---VTR---FGVIYAGAQKNVGPSG--VTIVIVRKDL  281 (430)
Q Consensus       220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G----~~~id---l~~---~d~~~~s~~K~~gp~G--~g~l~v~~~~  281 (430)
                      |||..++  +   |.++ +++|+++++|+++...    ..+..   +..   ..+++.|++|.+|++|  +|+++.++++
T Consensus       178 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l  257 (385)
T PRK09276        178 PTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADL  257 (385)
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHH
Confidence            9999999  3   4443 5889999999997632    11122   211   2377899999999889  9999999988


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+.....            ....+.+.+.+.++..+|+...  ..++.++++++++++.+.+.|++ .|+.+..  + 
T Consensus       258 ~~~~~~~~~------------~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~-  319 (385)
T PRK09276        258 IAGLGKVKS------------NVDSGVFQAIQEAGIAALNGPQ--EVVEELRKIYQERRDILVEGLRK-LGLEVEP--P-  319 (385)
T ss_pred             HHHHHHHHh------------hccCCCCHHHHHHHHHHHcCcH--HHHHHHHHHHHHHHHHHHHHHHh-CCCcccC--C-
Confidence            876432110            0112344556666666665321  24677888889999999999987 5776542  1 


Q ss_pred             CCccceEEEEcCCCchhHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                       .+...+.+.+++.....++.++|. ++||.+.+|..    ..+++|||++.  +++++...++.|++
T Consensus       320 -~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~  384 (385)
T PRK09276        320 -KATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV--PDERIEEAVERIKK  384 (385)
T ss_pred             -CcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC--CHHHHHHHHHHHhh
Confidence             122334566664212337888875 57999888742    13589999974  67777777766654

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.90  E-value=2.6e-21  Score=195.28  Aligned_cols=324  Identities=15%  Similarity=0.125  Sum_probs=217.7

Q ss_pred             CCCCceeecCCC--C-CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           67 QEDRVFNFAAGP--A-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        67 ~~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      ..+.+++|+.|.  . +.++.+++++.+.+.++. .+.+.+ ..  .....+..+++++.+++++|.+.  ++++ ++ +
T Consensus        40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~-~~~~~~-~~--~~G~~~l~~~l~~~la~~~g~~~--~i~~-ts-G  111 (397)
T PRK06939         40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHG-FGMASV-RF--ICGTQDLHKELEEKLAKFLGTED--AILY-SS-C  111 (397)
T ss_pred             CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcC-CCCccc-cc--ccCCcHHHHHHHHHHHHHhCCCc--EEEE-cC-h
Confidence            455577777653  2 368889999998876531 111110 00  11224567789999999999762  5544 45 4


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----C--CccEEEE
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----P--DAKYLHI  214 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~--~~~lv~i  214 (430)
                      ++++..++..+++|||+|++..+.+++..  ..++..+ ++..++.         .|+++++  +.    +  ++++|+.
T Consensus       112 ~~a~~~~~~~l~~~gd~vi~~~~~~~~~~--~~~~~~~~~~~~~~~---------~d~~~l~~~i~~~~~~~~~~~~v~~  180 (397)
T PRK06939        112 FDANGGLFETLLGKEDAIISDALNHASII--DGVRLCKAKRYRYAN---------NDMADLEAQLKEAKEAGARHKLIAT  180 (397)
T ss_pred             HHHHHHHHHHhCCCCCEEEEEhhhhHHHH--HHHHhcCCceEEeCC---------CCHHHHHHHHHhhhccCCCCeEEEE
Confidence            88999988888999999998776666542  2233445 5433321         3455554  32    3  7888888


Q ss_pred             eecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc---------ccc-cccEEEeCCCccc-cCCccEEEEEcHH
Q 043610          215 CANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV---------DVT-RFGVIYAGAQKNV-GPSGVTIVIVRKD  280 (430)
Q Consensus       215 ~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i---------dl~-~~d~~~~s~~K~~-gp~G~g~l~v~~~  280 (430)
                      .++.+++|...+  +|.++ +++|+++++|++|++|....         ++. +.|++++|++|++ |++| |+++++++
T Consensus       181 ~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~-G~v~~~~~  259 (397)
T PRK06939        181 DGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASG-GYTAGRKE  259 (397)
T ss_pred             ecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCc-eEEEeCHH
Confidence            888999999888  78886 68999999999997664321         221 2468999999999 5765 99999999


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +++.+......+          ...++++...+.++.++++++.+   .+.+++++.++++++++.|.+ .|++..+  +
T Consensus       260 ~~~~l~~~~~~~----------~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~  323 (397)
T PRK06939        260 VIDWLRQRSRPY----------LFSNSLAPAIVAASIKVLELLEE---SDELRDRLWENARYFREGMTA-AGFTLGP--G  323 (397)
T ss_pred             HHHHHHHhCccc----------cccCCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH-cCCCcCC--C
Confidence            887654211000          11234455556677778887642   267889999999999999986 5765532  1


Q ss_pred             CCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC---C--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          361 SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH---R--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~---~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                        .. ..+.+.+++.....+|++.|.++||.+.++.   .  ..++||++++.+++++|++++++.|+++++++
T Consensus       324 --~~-~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        324 --EH-PIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             --CC-CEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence              12 2333444431122379999988899876421   1  12479999998899999999999999998765

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.90  E-value=2.6e-21  Score=194.63  Aligned_cols=324  Identities=10%  Similarity=0.054  Sum_probs=213.5

Q ss_pred             CCCCCceeecCC--CC-CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           66 GQEDRVFNFAAG--PA-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        66 ~~~~~~~l~~~g--p~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      ...+++++|+.|  +. +.++.+++++.+.+.+... ..+.+..   .....++.+++++.+++++|.+.  .+ +++ +
T Consensus        30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~-~~~~~~~---~~g~~~l~~~l~~~l~~~~g~~~--~i-~~~-s  101 (385)
T TIGR01825        30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGV-GAGAVRT---IAGTLRLHEELEEKLAKFKKTEA--AL-VFQ-S  101 (385)
T ss_pred             ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCC-CCCccCc---ccCCcHHHHHHHHHHHHHhCCCc--EE-EEC-c
Confidence            334567777755  33 3678899998888764321 1111111   11224566789999999999753  44 444 4


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c----CCCccEEEEe
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q----NPDAKYLHIC  215 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i----~~~~~lv~i~  215 (430)
                      |++++..++..++++||.|++....+.+. + ...+..| ++..++         .+|+++++  +    .+++++|++.
T Consensus       102 G~~a~~~a~~~~~~~gd~vi~~~~~~~~~-~-~~~~~~g~~~~~~~---------~~d~~~l~~~l~~~~~~~~~~v~~~  170 (385)
T TIGR01825       102 GFNTNQGVLSALLRKGDIVLSDELNHASI-I-DGLRLTKATKKIYK---------HADMDDLDRVLRENPSYGKKLIVTD  170 (385)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEccccHHH-H-HHHHhcCCceEEeC---------CCCHHHHHHHHHhhccCCCeEEEEe
Confidence            57888888888889999877554433332 1 1223344 433221         24555554  2    2478999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------cccc-cccEEEeCCCccccCCccEEEEEcHHHH
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VDVT-RFGVIYAGAQKNVGPSGVTIVIVRKDLL  282 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------idl~-~~d~~~~s~~K~~gp~G~g~l~v~~~~~  282 (430)
                      ++.|+||.+.|  +|.++ +++|+++++|++|+.|..+         ++++ +.++++.|++|++|++| |+++.+++++
T Consensus       171 ~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-G~~~~~~~~~  249 (385)
T TIGR01825       171 GVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG-GYAAGHKELI  249 (385)
T ss_pred             cCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC-CEEecCHHHH
Confidence            99999999999  78886 6899999999999766432         2332 34688999999998777 8888888887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+......+          ...++.+...++++.++++.+.+.   .+..++..++++++++.|.+ .|+++..  +  
T Consensus       250 ~~~~~~~~~~----------~~~~~~~~~~~~a~~~al~~~~~~---~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--  311 (385)
T TIGR01825       250 EYLKNRARPF----------LFSTAQPPAVVAALAAAVDELQRS---PELMERLWDNTRFFKAGLGK-LGYDTGG--S--  311 (385)
T ss_pred             HHHHHhCccc----------cccCCCCHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHH-cCCCCCC--C--
Confidence            7643211000          011234556678888888876431   35777888899999999987 6877653  1  


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCC-C----CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG-H----RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g-~----~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+ .+.+.++......+|.+.|.++||.+..+ +    ...+++|++++.+++++|+++++++|+++++.
T Consensus       312 ~~~-~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~  381 (385)
T TIGR01825       312 ETP-ITPVVIGDEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE  381 (385)
T ss_pred             CCC-EEEEEECCHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence            122 34445442112236889998889987421 1    11247999999999999999999999998764

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.90  E-value=2.3e-21  Score=196.14  Aligned_cols=323  Identities=12%  Similarity=0.061  Sum_probs=213.2

Q ss_pred             CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCC-cHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHR-GKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~-~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~g  142 (430)
                      .+.++.++.|..  ++++.+.+++.+.+.+..        ...+ .....++.+.+.+.+.+..|.  +++.+|++ ++|
T Consensus        31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~--------~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i-t~G  101 (399)
T PRK07681         31 GHKMIDLSIGNPDMPPADFVREEMVHTANQKE--------SYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLL-LMG  101 (399)
T ss_pred             CCCeEEeCCCCCCCCCCHHHHHHHHHHHhccc--------cCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEE-CCC
Confidence            345677776653  467788888887664311        1111 111222223333334333343  44226766 588


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      +++++..++..++++||+|++..+++..+.  ..++..| +++.++..++  .+..+|+++++  +.+++++|++++++|
T Consensus       102 ~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~~~~--~~~~~d~~~l~~~~~~~~k~v~l~~P~N  177 (399)
T PRK07681        102 SQDGLVHLPMVYANPGDIILVPDPGYTAYE--TGIQMAGATSYYMPLKKE--NDFLPDLELIPEEIADKAKMMILNFPGN  177 (399)
T ss_pred             cHHHHHHHHHHhCCCCCEEEECCCCccchH--HHHHhcCCEEEEEecCCC--CCCcCCHHHHHHhccccceEEEEeCCCC
Confidence            999999999999999999998777765543  3456678 8888887532  23347788775  667899999999999


Q ss_pred             CccccCC--C---Cccc-cCCCcEEEEeccCcCC---C-Cccc---ccc---ccEEEeCCCccccCCc--cEEEEEcHHH
Q 043610          220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFC---S-KPVD---VTR---FGVIYAGAQKNVGPSG--VTIVIVRKDL  281 (430)
Q Consensus       220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~-~~id---l~~---~d~~~~s~~K~~gp~G--~g~l~v~~~~  281 (430)
                      |||.+++  +   |.++ +++|+++++|++++-.   . .+..   +..   ..+++.|++|.+|++|  +||++.++++
T Consensus       178 PTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l  257 (399)
T PRK07681        178 PVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEI  257 (399)
T ss_pred             CcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHH
Confidence            9999999  3   4443 5889999999987622   1 1112   111   2377899999999889  9999999888


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+.....            ....+.+.+.+.++..+|+.-.  ..++..+++++++++.+.+.|.+ .|+.+..  + 
T Consensus       258 ~~~~~~~~~------------~~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--p-  319 (399)
T PRK07681        258 VRALTQFKS------------NTDYGVFLPIQKAACAALRNGA--AFCEKNRGIYQERRDTLVDGFRT-FGWNVDK--P-  319 (399)
T ss_pred             HHHHHHHHh------------hcccCCCHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHH-CCCcccC--C-
Confidence            776432110            1123456667777777775321  13566777888889999999987 5776532  1 


Q ss_pred             CCccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                       .+...+.+.+++...+.++...|.+ +||.+.+|..    ..+++|||++.  ++++++++++.|++
T Consensus       320 -~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~l~~l~~  384 (399)
T PRK07681        320 -AGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ--DEEVLQQAVENIRN  384 (399)
T ss_pred             -CeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence             1223344566642223378888766 8999888742    13589999983  78999999999987

>PLN02483 serine palmitoyltransferase

Probab=99.90  E-value=6.1e-21  Score=197.10  Aligned_cols=286  Identities=13%  Similarity=0.125  Sum_probs=194.8

Q ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCC
Q 043610          114 KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       114 ~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~  192 (430)
                      ....+++++.+|+++|.++  .+++  ++|+.++..++.+++++||+|++-+..+.+..  ..++..| +++.++...  
T Consensus       145 ~~~~~ele~~lA~~~g~~~--ai~~--~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~--~~~~~~Ga~v~~~~~~d--  216 (489)
T PLN02483        145 TKLHRELEELVARFVGKPA--AIVF--GMGYATNSTIIPALIGKGGLIISDSLNHNSIV--NGARGSGATIRVFQHNT--  216 (489)
T ss_pred             cHHHHHHHHHHHHHhCCCc--EEEE--CCHHHHHHHHHHHhCCCCCEEEEcchhhHHHH--HHHHHcCCeEEEEeCCC--
Confidence            3567789999999999764  4554  45677777778888999999887666665542  3455667 776665421  


Q ss_pred             cCCCCCCccc-cc--c---CCCc-----cE-EEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--------
Q 043610          193 KYTKIPNFDA-LE--Q---NPDA-----KY-LHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--------  249 (430)
Q Consensus       193 ~~g~~~d~~~-l~--i---~~~~-----~l-v~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--------  249 (430)
                          ..++++ ++  +   .|++     ++ |++.++.+.+|.+.+  +|.++ +++|+++++|++|++|..        
T Consensus       217 ----~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~  292 (489)
T PLN02483        217 ----PSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVC  292 (489)
T ss_pred             ----HHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchH
Confidence                122222 21  1   2433     54 444456688999999  78886 689999999999987642        


Q ss_pred             ---ccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          250 ---PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       250 ---~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                         .++..+.|++++|++|++|+.| |+++.++++++.+....+.+          ...++.+.+...++.++|+.+...
T Consensus       293 ~~~~v~~~~~dI~~~SfSKs~g~~G-G~i~~~~~li~~l~~~~~~~----------~~~~~~~p~~~~~~~aaL~~l~~~  361 (489)
T PLN02483        293 ELLGVDPADVDIMMGTFTKSFGSCG-GYIAGSKELIQYLKRTCPAH----------LYATSMSPPAVQQVISAIKVILGE  361 (489)
T ss_pred             HhcCCCcccCcEEEEecchhcccCc-eEEEcCHHHHHHHHHhCccc----------cccCCcCHHHHHHHHHHHHHHHhC
Confidence               2233445899999999999888 99999999888754321110          011234445555667788876532


Q ss_pred             cC---HHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC-CCC----C
Q 043610          327 GG---LNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK-GHR----S  398 (430)
Q Consensus       327 ~g---~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~~----~  398 (430)
                      .|   ..+..++++++++++++.|++ .|+.+.. +  ..++ ++.+.+.......++.++|.++||.+.+ ++.    .
T Consensus       362 ~g~~~~~~~~~~l~~~~~~l~~~L~~-~G~~v~~-~--~~sp-~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~  436 (489)
T PLN02483        362 DGTNRGAQKLAQIRENSNFFRSELQK-MGFEVLG-D--NDSP-VMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLL  436 (489)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHH-CCCcccC-C--CCCC-EEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCC
Confidence            22   245678899999999999997 5876543 1  2243 4555544312223688899889999764 221    1


Q ss_pred             CCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          399 VGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       399 ~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .+.+||+++..+++||+++++++|+++++
T Consensus       437 ~~~vRi~isa~~t~edId~~l~~L~~~~~  465 (489)
T PLN02483        437 LARARICISASHSREDLIKALEVISEVGD  465 (489)
T ss_pred             CceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            35799999999999999999999998865

>PRK07682 hypothetical protein; Validated

Probab=99.89  E-value=2.5e-21  Score=194.39  Aligned_cols=326  Identities=12%  Similarity=0.129  Sum_probs=213.8

Q ss_pred             CceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~  145 (430)
                      .++.++.|-.  +.++.+.+++.+.+.+    +...|..   .....+..+.+.+.+.+.+|.  +++.+|++ ++|+++
T Consensus        21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~-t~G~~~   92 (378)
T PRK07682         21 GVISLGVGEPDFVTPWNVREASIRSLEQ----GYTSYTA---NAGLLELRQEIAKYLKKRFAVSYDPNDEIIV-TVGASQ   92 (378)
T ss_pred             CeEEeCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE-eCChHH
Confidence            4566666542  3456678887766542    1111111   122233334444555544454  33225766 588999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      ++.+++.++++|||+|++..++++.+.  ..++..| ++..++...++++  .+|+++++  +.+++++|++++++||||
T Consensus        93 al~~~~~~l~~~gd~vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~~~~~~~~v~~~~p~NPtG  168 (378)
T PRK07682         93 ALDVAMRAIINPGDEVLIVEPSFVSYA--PLVTLAGGVPVPVATTLENEF--KVQPAQIEAAITAKTKAILLCSPNNPTG  168 (378)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCchhhH--HHHHHcCCEEEEeecCCccCC--CCCHHHHHhhcCcccEEEEEECCCCCcC
Confidence            999999999999999998887766432  3455567 7666765422123  47888887  677899999999999999


Q ss_pred             ccCC--C---Cccc-cCCCcEEEEeccCcCCCC---cc---cc---ccccEEEeCCCccccCCc--cEEEEEcHHHHhcc
Q 043610          223 VEFK--E---YPSA-KNSTGILVADMSSNFCSK---PV---DV---TRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNA  285 (430)
Q Consensus       223 ~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~i---dl---~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~  285 (430)
                      .+++  +   |.++ +++++++++|+++.....   +.   .+   .+..+++.|++|.+|.+|  +|++++++++++.+
T Consensus       169 ~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l  248 (378)
T PRK07682        169 AVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAM  248 (378)
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHH
Confidence            9998  3   4443 588999999998763321   11   11   122378999999999889  99999999988865


Q ss_pred             CCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610          286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF  365 (430)
Q Consensus       286 ~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~  365 (430)
                      ....    .        ....+.|...+.++..+|+.-.  ..++.++++++++++.+.+.|.+ .|+.+..  +  .+.
T Consensus       249 ~~~~----~--------~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~--p--~g~  309 (378)
T PRK07682        249 LKIH----Q--------YSMMCAPTMAQFAALEALRAGN--DDVIRMRDSYRKRRNFFVTSFNE-IGLTCHV--P--GGA  309 (378)
T ss_pred             HHHH----H--------hhccCCCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHH-CCCccCC--C--Cee
Confidence            3210    0        0112445667777777775321  13677888899999999999997 5776432  1  122


Q ss_pred             ceEEEEcCCCch-hHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          366 MNVPFTLEKSDL-EAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       366 ~iv~f~~~~~~~-~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+...+++.+. +.++.+.|. ++||.+.+|..    ..+++|||++.  +++++++.++.|++++++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~  376 (378)
T PRK07682        310 FYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT--SLEQLQEAMKRMKRFVEN  376 (378)
T ss_pred             EEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence            223334432122 337888864 67999888642    24689999985  689999999999998875

>PRK08960 hypothetical protein; Provisional

Probab=99.89  E-value=8.6e-22  Score=198.46  Aligned_cols=322  Identities=14%  Similarity=0.108  Sum_probs=208.3

Q ss_pred             CceeecC-CCC-CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C--CCCCcEEEEEeC
Q 043610           70 RVFNFAA-GPA-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N--IPQEYSVLFLQG  141 (430)
Q Consensus        70 ~~~l~~~-gp~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g--~~~~~~vv~~~~  141 (430)
                      .++.++. .|. ++|+.+++++.+.+.+    +...|..   ...    ..++|+.+++++    |  ++++ +|++ ++
T Consensus        33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~----~~~~Y~~---~~g----~~~lr~~ia~~~~~~~g~~~~~~-~i~i-t~   99 (387)
T PRK08960         33 DVIHLEIGEPDFTTAEPIVAAGQAALAA----GHTRYTA---ARG----LPALREAIAGFYAQRYGVDVDPE-RILV-TP   99 (387)
T ss_pred             CeEEeCCCCCCCCCCHHHHHHHHHHHhc----CCCccCC---CCC----CHHHHHHHHHHHHHHhCCCCChh-hEEE-cc
Confidence            3444444 343 5789999999887752    1111111   111    224555555555    3  4554 6776 57


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      |+++++..++..+++|||+|++.++++.++.  ..++..| ++..++...+  .+..+|+++++  ++++++++++++++
T Consensus       100 G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~~~~~~~~i~i~~p~  175 (387)
T PRK08960        100 GGSGALLLASSLLVDPGKHWLLADPGYPCNR--HFLRLVEGAAQLVPVGPD--SRYQLTPALVERHWNADTVGALVASPA  175 (387)
T ss_pred             CcHHHHHHHHHHhcCCCCEEEEcCCCCcchH--HHHHhcCCeEEEEecCcc--cCCCCCHHHHHHHhCccceEEEEECCC
Confidence            8999999999999999999998887776543  2344567 7777776432  12246778876  67889999999999


Q ss_pred             CCccccCC--CC---ccc-cCCCcEEEEeccCcCC---CCccccccc--c-EEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          219 TIHGVEFK--EY---PSA-KNSTGILVADMSSNFC---SKPVDVTRF--G-VIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       219 t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~G---~~~idl~~~--d-~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      ||||..++  ++   .++ +++|+++++|+++..-   .....+...  + +++.|++|.+|++|  +|++++++++++.
T Consensus       176 NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~  255 (387)
T PRK08960        176 NPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPE  255 (387)
T ss_pred             CCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHHH
Confidence            99999999  44   443 5789999999986421   111122122  2 68899999999889  9999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +.....            ....+.+.+.+.++..+|+.-. ...++..++.+++.++.+.+.|++ .|+.+.. .+.  .
T Consensus       256 ~~~~~~------------~~~~~~s~~~q~a~~~~l~~~~-~~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~p~--g  318 (387)
T PRK08960        256 LEKLAQ------------NLYISASTPAQHAALACFEPET-LAILEARRAEFARRRDFLLPALRE-LGFGIAV-EPQ--G  318 (387)
T ss_pred             HHHHHh------------hhccCCCHHHHHHHHHHhhcCc-HHHHHHHHHHHHHHHHHHHHHHHh-cCCcCCc-CCC--e
Confidence            432110            0112345666676666664210 123566777888889999999986 5765421 121  2


Q ss_pred             cceEEEEcCCCch-hHHHHHHH-HHcCCeecCCCCC-----CCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          365 FMNVPFTLEKSDL-EAEFVKEA-AKEKMVQLKGHRS-----VGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       365 ~~iv~f~~~~~~~-~~~~~~~L-~~~Gi~~~~g~~~-----~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ...+.+.+++... +.+++++| +++||.+.+|...     .+++||++..  +.+.+...++.|+++++
T Consensus       319 ~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~~  386 (387)
T PRK08960        319 AFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGLR  386 (387)
T ss_pred             eEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence            2223455553112 33788776 5689998886421     3589999985  56777777777777654

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.89  E-value=1.6e-21  Score=203.47  Aligned_cols=330  Identities=12%  Similarity=0.109  Sum_probs=210.3

Q ss_pred             CCCCCceeecCC-C----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh------CCCCCc
Q 043610           66 GQEDRVFNFAAG-P----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL------NIPQEY  134 (430)
Q Consensus        66 ~~~~~~~l~~~g-p----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~------g~~~~~  134 (430)
                      ..++.++.++.| |    .+.|+.+++++.+.+...  .        ++++.  .-..++|+.+++++      +.+++ 
T Consensus       143 ~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~--------~Y~~~--~G~~~lReaia~~~~~~~~~~~~~~-  209 (517)
T PRK13355        143 AAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--E--------GYSDS--KGLFSARKAIMQYAQLKGLPNVDVD-  209 (517)
T ss_pred             HcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--C--------CCCCC--cChHHHHHHHHHHHHhcCCCCCChh-
Confidence            345677888773 3    244889999998876421  1        11111  11235666666666      56665 


Q ss_pred             EEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccE
Q 043610          135 SVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKY  211 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~l  211 (430)
                      +|+++ +|+++++..++..++++||+|++..+++..+.  ..++..| +++.++..++.+|  .+|+++++  +++++++
T Consensus       210 ~I~it-~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~--~~~~~~g~~~v~~~~~~~~~~--~~d~~~l~~~~~~~~k~  284 (517)
T PRK13355        210 DIYTG-NGVSELINLSMSALLDDGDEVLIPSPDYPLWT--ACVNLAGGTAVHYRCDEQSEW--YPDIDDIRSKITSRTKA  284 (517)
T ss_pred             HEEEe-CcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHH--HHHHHCCCEEEEeecCcccCC--CCCHHHHHHhcCcCceE
Confidence            77764 78999999999999999999998887766543  3455667 7777776542223  57888887  6889999


Q ss_pred             EEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC---C-CCccccccc--c---EEEeCCCccccCCc--cEE
Q 043610          212 LHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF---C-SKPVDVTRF--G---VIYAGAQKNVGPSG--VTI  274 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~---G-~~~idl~~~--d---~~~~s~~K~~gp~G--~g~  274 (430)
                      |++++++||||.+++  +   |.++ +++|+++++|+++.-   . .....+..+  +   +++.|++|.++++|  +||
T Consensus       285 i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~  364 (517)
T PRK13355        285 IVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGW  364 (517)
T ss_pred             EEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEE
Confidence            999999999999999  3   4443 578999999998752   1 111222222  3   34589999999889  899


Q ss_pred             EEEc--HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          275 VIVR--KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE-LGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       275 l~v~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~-~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      ++++  +++++.+..    .+.  . . . ....+.|.+.+.++..+|+.... ..-++.. .++.+.++++.+.|++..
T Consensus       365 ~i~~~~~~~~~~~~~----~l~--~-~-~-~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~  434 (517)
T PRK13355        365 MILSGNKRIAKDYIE----GLN--M-L-A-NMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNAIP  434 (517)
T ss_pred             EEeeCchhhHHHHHH----HHH--H-H-h-cCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCC
Confidence            9864  333221100    000  0 0 0 11124567778888777742100 0012222 344556789999998754


Q ss_pred             CceecCCCCCCCccceEEEEcCCC----chhHHHHH-HHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKS----DLEAEFVK-EAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~----~~~~~~~~-~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      |+.+.+  +  .....+.+.++..    ..+.+++. .|.++||.+.+|..    ..+++|||+.  .++++++..++.|
T Consensus       435 g~~~~~--p--~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~--~~~~~l~~a~~rl  508 (517)
T PRK13355        435 GISAVK--P--KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL--PRLEDLEDAMDRL  508 (517)
T ss_pred             CcccCC--C--CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC--CCHHHHHHHHHHH
Confidence            776543  1  1222232355431    11335554 56788999988753    2468999995  4789999999999


Q ss_pred             HHHHHhh
Q 043610          423 KDFQAKH  429 (430)
Q Consensus       423 ~~~~~~~  429 (430)
                      ++++.++
T Consensus       509 ~~~~~~~  515 (517)
T PRK13355        509 ADFFSYY  515 (517)
T ss_pred             HHHHHHh
Confidence            9988753

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.89  E-value=3.5e-21  Score=196.39  Aligned_cols=334  Identities=13%  Similarity=0.103  Sum_probs=218.2

Q ss_pred             CCCceeecCC-C-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCcE
Q 043610           68 EDRVFNFAAG-P-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEYS  135 (430)
Q Consensus        68 ~~~~~l~~~g-p-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~~  135 (430)
                      ...++.++.| |     .+.|+.+.+++.+.+..-...+        +++.  .-..++|+.++++++      .+++ +
T Consensus        51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~--------Y~~~--~G~~~lr~aia~~~~~~~~~~~~~~-~  119 (430)
T PLN00145         51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNS--------YSTC--VGLLPARRAIAEYLSRDLPYELSTD-D  119 (430)
T ss_pred             CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCC--------CCCC--ccCHHHHHHHHHHHhhccCCCCChh-h
Confidence            4467777776 3     4667899999988775311111        1110  112355666666664      2444 6


Q ss_pred             EEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEE
Q 043610          136 VLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYL  212 (430)
Q Consensus       136 vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv  212 (430)
                      |++ ++|+++|+..++..+++|||+|++..+++..+.  ..+...| +++.++....+.|  .+|+++++  ++++++++
T Consensus       120 v~i-t~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~--~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~~~~~~~~i  194 (430)
T PLN00145        120 IYL-TAGCAQAIEIIMSVLAQPGANILLPRPGYPLYE--ARAVFSGLEVRHFDLLPERGW--EVDLEGVEALADENTVAM  194 (430)
T ss_pred             EEE-eCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHH--HHHHHcCCEEEEeeCCcccCC--cCCHHHHHHHhCcCceEE
Confidence            766 588999999999999999999998887766542  2344557 7777775432223  47888887  67899999


Q ss_pred             EEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC---CCCc-ccc---cccc--EEEeCCCccccCCc--cEEE
Q 043610          213 HICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF---CSKP-VDV---TRFG--VIYAGAQKNVGPSG--VTIV  275 (430)
Q Consensus       213 ~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~---G~~~-idl---~~~d--~~~~s~~K~~gp~G--~g~l  275 (430)
                      ++++++||||.+++  +   |.++ +++|+++++|+++..   +..+ +.+   ...+  +++.|++|.++.+|  +||+
T Consensus       195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~i  274 (430)
T PLN00145        195 VIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWI  274 (430)
T ss_pred             EEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEE
Confidence            99999999999999  3   4443 588999999998753   2222 222   2222  78899999999889  8999


Q ss_pred             EEc--HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc
Q 043610          276 IVR--KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF  353 (430)
Q Consensus       276 ~v~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~  353 (430)
                      ++.  +.+++...- .   ..+..   .......++.+.+.++..+|+.-. +..++...+++++.++.+++.|++..|+
T Consensus       275 v~~~~~~~~~~~~~-~---~~~~~---~~~~~~~~~~~~Q~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~g~  346 (430)
T PLN00145        275 ATCDPNGILKETKV-V---DSIRN---YLNISTDPATFVQGAIPQIIANTK-EEFFTKTLGLLKETADICYEKIKEIKCI  346 (430)
T ss_pred             EEecchhhhhhhHH-H---HHHHH---HhcccCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            873  333322100 0   00000   001112356677888877776311 2246788889999999999999875566


Q ss_pred             eecCCCCCCCccceEEEEcCCC---c--hhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          354 YKCPVEKSVRSFMNVPFTLEKS---D--LEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       354 ~~~~~~~~~rs~~iv~f~~~~~---~--~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .... .+  ...+-+.+.++..   +  .+.+++.+| +++||.+.+|..  ..+++|||+..  +.++++..++.|+++
T Consensus       347 ~~~~-~P--~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~--~~~~l~~al~rl~~~  421 (430)
T PLN00145        347 TCPH-KP--EGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI--DPPSLEDGLERLKSF  421 (430)
T ss_pred             CCCc-CC--CeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHH
Confidence            5321 12  1223344455421   1  133677665 567999988753  35689999984  788899999999999


Q ss_pred             HHhhC
Q 043610          426 QAKHA  430 (430)
Q Consensus       426 ~~~~~  430 (430)
                      +.+|.
T Consensus       422 ~~~~~  426 (430)
T PLN00145        422 CLRHA  426 (430)
T ss_pred             HHHhc
Confidence            98874

>PRK12414 putative aminotransferase; Provisional

Probab=99.89  E-value=2.4e-21  Score=195.01  Aligned_cols=321  Identities=12%  Similarity=0.107  Sum_probs=213.5

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT  144 (430)
                      +.+++|+.|-  .++++.+.+++.+.+.+    +...|.   ......++.+.+++.+++++|.+  ++.+++++ +|++
T Consensus        29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it-~g~~  100 (384)
T PRK12414         29 HDALNLSQGAPNFAPDPALVEGVARAMRD----GHNQYA---PMAGIAALREALAEKTERLYGARYDPASEVTVI-ASAS  100 (384)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHHh----CCCCcC---CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEE-CChH
Confidence            3567777654  34577888888776542    111110   11224456678888888888974  22257765 7899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +++..++.+++.|||+|++..+++..+  ...++..| +++.++..+   .+..+|+++++  +++++++|++++++|||
T Consensus       101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~v~i~~p~NPT  175 (384)
T PRK12414        101 EGLYAAISALVHPGDEVIYFEPSFDSY--APIVRLQGATPVAIKLSP---EDFRVNWDEVAAAITPRTRMIIVNTPHNPS  175 (384)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCccch--HHHHHHcCCEEEEEecCc---cccccCHHHHHhhcCcccEEEEEcCCCCCC
Confidence            999999999999999999888776543  23455567 777777642   12247888887  67889999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcC---CCCcc-cc---ccc-c--EEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNF---CSKPV-DV---TRF-G--VIYAGAQKNVGPSG--VTIVIVRKDLLG  283 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~---G~~~i-dl---~~~-d--~~~~s~~K~~gp~G--~g~l~v~~~~~~  283 (430)
                      |.+++  +   |.++ +++|+++++|+++..   ...+. .+   ..+ +  +++.|++|.+|.+|  +|++++++++++
T Consensus       176 G~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~  255 (384)
T PRK12414        176 ATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMD  255 (384)
T ss_pred             CcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHH
Confidence            99998  3   4444 579999999999763   21111 12   222 2  78999999999889  799999998877


Q ss_pred             ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      .+.....            ....+.+.+.+.++..+|+.   ......+.+.+++.++.+.+.|++ .|+.+.+  +  .
T Consensus       256 ~l~~~~~------------~~~~~~s~~~q~a~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~-~g~~~~~--~--~  315 (384)
T PRK12414        256 EIRKVHQ------------FMVFSADTPMQHAFAEALAE---PASYLGLGAFYQRKRDLLARELAG-SRFELLP--S--E  315 (384)
T ss_pred             HHHHHHh------------heecCCCcHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHh-CCCeecC--C--C
Confidence            6432110            01123455677777666642   112345677888899999999987 5776543  1  1


Q ss_pred             ccceEEEEcCC--CchhHHHHH-HHHHcCCeecCCCCC------CCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          364 SFMNVPFTLEK--SDLEAEFVK-EAAKEKMVQLKGHRS------VGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       364 s~~iv~f~~~~--~~~~~~~~~-~L~~~Gi~~~~g~~~------~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      +...+.+.+++  ...+.+++. .|.++||.+.+|...      .+++|||+..  +++++++.++.|.+
T Consensus       316 gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~~~rl~~  383 (384)
T PRK12414        316 GSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLVEGARRLCS  383 (384)
T ss_pred             cceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence            22233335542  122346664 567889998886421      3579999995  68888888887764

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.89  E-value=8e-22  Score=196.34  Aligned_cols=270  Identities=15%  Similarity=0.134  Sum_probs=186.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT  195 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g  195 (430)
                      .++|+.+++++|++++ +|+++ +|+++++..++..++++| |+|++..+.+..+.  ..++..| +++.++...  ++ 
T Consensus        63 ~~Lr~aia~~~~~~~~-~I~it-~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~--~~~~~~g~~v~~v~~~~--~~-  135 (354)
T PRK04635         63 PELINAYSAYAGVAPE-QILTS-RGADEAIELLIRAFCEPGQDSIACFGPTYGMYA--ISAETFNVGVKALPLTA--DY-  135 (354)
T ss_pred             HHHHHHHHHHhCcCHH-HEEEe-CCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH--HHHHHcCCEEEEEecCC--CC-
Confidence            4778999999999886 77765 789999999999998888 88887766654432  3466778 888887743  23 


Q ss_pred             CCCCccccc-cCCCccEEEEeecCCCccccCC--CCccc-c-CCCcEEEEeccCcCCCCc---cccc-ccc--EEEeCCC
Q 043610          196 KIPNFDALE-QNPDAKYLHICANETIHGVEFK--EYPSA-K-NSTGILVADMSSNFCSKP---VDVT-RFG--VIYAGAQ  264 (430)
Q Consensus       196 ~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~-~~g~~lvvD~a~s~G~~~---idl~-~~d--~~~~s~~  264 (430)
                       .+|.+.++ + +++++|++++++||||.+++  ++.++ + .+++++++|+++.-....   .++. ..+  +++.|++
T Consensus       136 -~~~~~~l~~~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~S  213 (354)
T PRK04635        136 -QLPLDYIEQL-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLS  213 (354)
T ss_pred             -CCCHHHHHhc-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechH
Confidence             36666666 4 68999999999999999999  66664 2 235999999987432211   1221 122  6789999


Q ss_pred             ccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH---HHHHHHHHHH
Q 043610          265 KNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGL---NEVEKMNRKK  339 (430)
Q Consensus       265 K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~---~~v~~~~~~l  339 (430)
                      |++|++|  +|++++++++++.+.....              ..+.+...+.++..+|+    ..|.   ++..+++++.
T Consensus       214 K~~~l~GlRlG~~i~~~~~~~~l~~~~~--------------~~~~~~~~~~~a~~~l~----~~~~~~~~~~~~~~~~~  275 (354)
T PRK04635        214 KAFALAGARCGFTLANEELIEILMRVIA--------------PYPVPLPVSEIATQALS----EAGLARMKFQVLDLNAQ  275 (354)
T ss_pred             HHhhhhHHHHhhhhCCHHHHHHHHhhcC--------------CCCCCHHHHHHHHHHHh----cccHHHHHHHHHHHHHH
Confidence            9999888  7999999998876532111              12234444444444443    1233   3445566777


Q ss_pred             HHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC--CCCCeeEEeecCCCCHHHHHH
Q 043610          340 AELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH--RSVGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       340 ~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~--~~~g~iRis~~~~~t~edv~~  417 (430)
                      ++++.+.|++..++++.+  +  .++ -+.+.+++   ..++.+.|.++||.+....  ...+++|||++   +.+|+++
T Consensus       276 r~~l~~~L~~~~~~~~~~--~--~g~-f~~~~~~~---~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~---~~e~~~~  344 (354)
T PRK04635        276 GARLQAALSMYGGAKVLE--G--NGN-YVLAKFDD---VDAVFKALWDAGIVARAYKDPRLANCIRFSFS---NRAETDK  344 (354)
T ss_pred             HHHHHHHHHhCCCceECC--C--CCc-EEEEECCC---HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHH
Confidence            788999998743466553  1  122 23345542   2368888889999875432  12457999986   7999999


Q ss_pred             HHHHHHHH
Q 043610          418 LVAFMKDF  425 (430)
Q Consensus       418 ll~~L~~~  425 (430)
                      ++++|+++
T Consensus       345 l~~al~~~  352 (354)
T PRK04635        345 LIGLIRNQ  352 (354)
T ss_pred             HHHHHHHh
Confidence            99999875

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.89  E-value=4.4e-21  Score=194.48  Aligned_cols=329  Identities=14%  Similarity=0.098  Sum_probs=214.9

Q ss_pred             CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc-HHHHHHHHHHHHHHHHHhCC---CCCcEEEEEe
Q 043610           67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG-KEFKSIIEKAESDLRALLNI---PQEYSVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~-~~~~~~~~~~r~~la~l~g~---~~~~~vv~~~  140 (430)
                      ++..+++++.|-  ..+++.+++++.+.+....        ...+. ....++.+.+.+.+.+.+|.   +++.+|++ +
T Consensus        42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~--------~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~i-t  112 (410)
T PRK06290         42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPE--------NRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIH-S  112 (410)
T ss_pred             CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC--------CCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEE-c
Confidence            344567776654  3467788888876553210        01111 12223333444444444454   34325665 5


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      +|+++++..++..++++||+|++..+++..+.  ..++..| ++..++..++  .+..+|+++++  +.+++++|+++++
T Consensus       113 ~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~--~~~~~~g~~v~~v~~~~~--~~~~~d~~~l~~~~~~~~k~i~l~nP  188 (410)
T PRK06290        113 IGSKPALAMLPSCFINPGDVTLMTVPGYPVTG--THTKYYGGEVYNLPLLEE--NNFLPDLDSIPKDIKEKAKLLYLNYP  188 (410)
T ss_pred             cCHHHHHHHHHHHhCCCCCEEEEeCCCCccHH--HHHHHcCCEEEEEecCCC--cCCcCCHHHHHHhhcccceEEEEECC
Confidence            88999999999999999999998887766542  3566678 8888887542  12246777775  6678999999999


Q ss_pred             CCCccccCC--CC---ccc-cCCCcEEEEeccCcCCC---Cccc---cc---cccEEEeCCCccccCCc--cEEEEEcHH
Q 043610          218 ETIHGVEFK--EY---PSA-KNSTGILVADMSSNFCS---KPVD---VT---RFGVIYAGAQKNVGPSG--VTIVIVRKD  280 (430)
Q Consensus       218 ~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~G~---~~id---l~---~~d~~~~s~~K~~gp~G--~g~l~v~~~  280 (430)
                      +||||.+++  ++   .++ +++|+++++|+++....   .+..   +.   +..+++.|++|.+|.+|  +||++.+++
T Consensus       189 ~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~  268 (410)
T PRK06290        189 NNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNEL  268 (410)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHH
Confidence            999999999  33   343 57899999999876321   1112   22   22488999999999889  899999998


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +++.+.....            ....+.+.+.+.++..+|+.-   .-++.+.+++++.++++++.|++ .|+.+.+  +
T Consensus       269 l~~~l~~~~~------------~~~~~~~~~~q~aa~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--p  330 (410)
T PRK06290        269 IVKAFATVKD------------NNDSGQFIAIQKAGIYALDHP---EITEKIREKYSRRLDKLVKILNE-VGFKAEM--P  330 (410)
T ss_pred             HHHHHHHHHh------------ccccCCcHHHHHHHHHHhhCc---HHHHHHHHHHHHHHHHHHHHHHh-CCCeecC--C
Confidence            8776432111            011223345566666666531   12567788888999999999987 5776542  1


Q ss_pred             CCCccceEEEEcCCCc-------hhHHHHHHHHHcC-CeecCCCCCCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610          361 SVRSFMNVPFTLEKSD-------LEAEFVKEAAKEK-MVQLKGHRSVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~-------~~~~~~~~L~~~G-i~~~~g~~~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~  428 (430)
                        .+...+.+.+++..       ...++.++|.++| +++.+|....+++||+++.. .++|+.++++++|++.+.+
T Consensus       331 --~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~  405 (410)
T PRK06290        331 --GGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSD  405 (410)
T ss_pred             --CeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence              12233445666421       1237889887775 45556544446899999863 4689999999999998764

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.89  E-value=3.1e-21  Score=195.80  Aligned_cols=337  Identities=16%  Similarity=0.166  Sum_probs=215.6

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHH-HHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEK-AESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~-~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .+.+.+++.++-..++|.|++++...+.+.++.|.+. +....+.+....+++ +++.+++++|.+.   .++..+||+.
T Consensus        26 ~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~g-sr~~~G~~~~~~lE~~~~~~la~l~g~~~---alv~~~SG~~  101 (416)
T PRK13034         26 RQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPG-KRYYGGCEFVDEVEALAIERAKQLFGCDY---ANVQPHSGSQ  101 (416)
T ss_pred             HHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCC-CcccCCChHHHHHHHHHHHHHHHHhCCCc---eEEecCCcHH
Confidence            3466788888888899999999999863333333211 111122344444554 6679999999874   3333478899


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHH--hC-CceEEecCCCCcCCCCCCccccc--c-CCCccEEEEeecCC
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQK--FC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANET  219 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~--~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t  219 (430)
                      |+..++.++++|||+|++....+.+... .-++.  .+ ....+...-+ .....+|+++++  + ..++++|++.+  +
T Consensus       102 A~~~~l~al~~~GD~Vl~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~-~~~~~~d~~~le~~l~~~~~klVi~~~--~  177 (416)
T PRK13034        102 ANGAVYLALLKPGDTILGMSLSHGGHLT-HGAKVSLSGKWYNAVQYGVD-RLTGLIDYDEVEELAKEHKPKLIIAGF--S  177 (416)
T ss_pred             HHHHHHHHhcCCCCEEEEcCccceeeee-cCCcceeccceeeeEEcccc-cccCCcCHHHHHHHHhhcCCeEEEECC--C
Confidence            9999999999999999987666544211 00000  11 1110111100 112347788776  4 33678877654  4


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-----ccccccEEEeCCCccc-cCCccEEEEEcHH-HHhccCCCC
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV-----DVTRFGVIYAGAQKNV-GPSGVTIVIVRKD-LLGNAQDKT  289 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i-----dl~~~d~~~~s~~K~~-gp~G~g~l~v~~~-~~~~~~~~~  289 (430)
                      .+|+..|  +|.++ +++|+++++|++|++|....     .+...|++++++|||+ ||.| |+++.+++ +.+.++...
T Consensus       178 ~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~~~  256 (416)
T PRK13034        178 AYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSAV  256 (416)
T ss_pred             ccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHhhc
Confidence            5688888  78876 68999999999999887632     2344689999999999 6888 76666544 434332210


Q ss_pred             CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEE
Q 043610          290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP  369 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~  369 (430)
                        +.+         +..++..+.+.++..++..+.+. +..+.+++..++++++++.|.+ .|+.+...  ...+ .+++
T Consensus       257 --~~~---------~~~~~~~~~~aa~~~al~~~~~~-~~~~~~~~l~~~a~~l~~~L~~-~G~~~~~~--~~~t-~i~~  320 (416)
T PRK13034        257 --FPG---------LQGGPLMHVIAAKAVAFGEALQP-EFKTYAKQVIANAQALAEVLKE-RGYDLVSG--GTDN-HLLL  320 (416)
T ss_pred             --CCc---------ccCCccHHHHHHHHHHHHHHhCh-hHHHHHHHHHHHHHHHHHHHHH-cCCEeccC--CCCC-cEEE
Confidence              000         11233444455555555544322 4456789999999999999987 59987631  1124 3566


Q ss_pred             EEcCCCchhH-HHHHHHHHcCCeecC----C-CCC---CCeeEEeecC----CCCHHHHHHHHHHHHHHHHh
Q 043610          370 FTLEKSDLEA-EFVKEAAKEKMVQLK----G-HRS---VGGMRASIYN----AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       370 f~~~~~~~~~-~~~~~L~~~Gi~~~~----g-~~~---~g~iRis~~~----~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.+.+... .+.++|.++||.+..    + .+.   ..++|+|++.    .++++|+++++++|++++.+
T Consensus       321 v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~  392 (416)
T PRK13034        321 VDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD  392 (416)
T ss_pred             EEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence            6665434344 566889999998753    1 111   2369999888    56799999999999988753

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.89  E-value=6.1e-22  Score=195.50  Aligned_cols=304  Identities=13%  Similarity=0.044  Sum_probs=194.1

Q ss_pred             CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      .|.++++.+++++.+.....          ..+++  ....+++++.+++++| ++  +++++ +|||+++..++.++++
T Consensus         6 ~~~~~~~~v~~a~~~~~~~~----------~~~~~--~~~~~~l~~~~a~~~g-~~--~~~~~-~~gt~a~~~~~~~l~~   69 (338)
T cd06502           6 TVTGPTPEMLEAMAAANVGD----------DVYGE--DPTTAKLEARAAELFG-KE--AALFV-PSGTAANQLALAAHTQ   69 (338)
T ss_pred             cCCCCCHHHHHHHHhcccCC----------cccCC--CHHHHHHHHHHHHHhC-CC--eEEEe-cCchHHHHHHHHHhcC
Confidence            46668889999998754210          01111  1346688899999999 43  56665 6788999999999889


Q ss_pred             CCCcEEEEeCChhHHHHH-HHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-------CccEEEEeecCCCccccC
Q 043610          157 PNDPVDYIVTGSWGDKAF-KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-------DAKYLHICANETIHGVEF  225 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~-~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-------~~~lv~i~~~~t~tG~~~  225 (430)
                      +||+|++..+.+++.... ..++..| +++.++..    .+ .+|+++++  +++       ++++|++++++|+ |.++
T Consensus        70 ~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~-~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~  143 (338)
T cd06502          70 PGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGE----NG-KLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVY  143 (338)
T ss_pred             CCCeEEEecCcceeeecCCcHHHHcCceEEeecCC----CC-cCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-cccc
Confidence            999999777665542211 1233357 77667652    22 47888876  443       7899999999986 6555


Q ss_pred             C--C---Cccc-cCCCcEEEEeccCcCCC-----Cccc-c-ccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc
Q 043610          226 K--E---YPSA-KNSTGILVADMSSNFCS-----KPVD-V-TRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM  292 (430)
Q Consensus       226 p--e---i~~~-~~~g~~lvvD~a~s~G~-----~~id-l-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~  292 (430)
                      +  +   |.++ +++|+++++|+++..+.     .+++ + ...|+++.|+|||+|.+|-++++.++++++.+++.... 
T Consensus       144 ~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~-  222 (338)
T cd06502         144 PLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQ-  222 (338)
T ss_pred             CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHH-
Confidence            6  4   5554 57899999999863221     1222 1 23478899999999855645666788887765431110 


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                        +      +.. .+.+.....++..+|+    ..++....+++.++++++.+.|++ .|+.+.+    ..+ .++.+.+
T Consensus       223 --~------~~~-~~~~~~~~~a~~~~L~----~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~----~~~-~~~~v~~  283 (338)
T cd06502         223 --A------GGG-MRQSGFLAAAGLAALE----NDLWLRRLRHDHEMARRLAEALEE-LGGLESE----VQT-NIVLLDP  283 (338)
T ss_pred             --h------CCC-hhhHHHHHHHHHHHhc----CchHHHHHHHHHHHHHHHHHHHHh-cCCCccc----ccC-CeEEEec
Confidence              0      000 1222233333333443    235666778888999999999987 5664321    123 3455555


Q ss_pred             CCCch-hHHHHHHHH---HcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          373 EKSDL-EAEFVKEAA---KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       373 ~~~~~-~~~~~~~L~---~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      +.... ..++.+.+.   ++|+.+....  .++|||+++.+++++|+++++++|++
T Consensus       284 ~~~~~~~~~l~~~l~~~~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         284 VEANAVFVELSKEAIERRGEGVLFYAWG--EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             CCccHHHHHHHHHHHHhhhCCEEEEecC--CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            43111 113444443   5788875421  16899999999999999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.89  E-value=6.2e-21  Score=191.16  Aligned_cols=310  Identities=12%  Similarity=0.077  Sum_probs=210.6

Q ss_pred             CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.++.++.|  |..+++.+.+++.+....          ..++... ..  .++|+.+++++|++++ +|+++ +|++++
T Consensus        36 ~~~i~l~~~~~~~~~~~~~~~al~~~~~~----------~~~Y~~~-~g--~~lr~~ia~~~~~~~~-~i~~t-~G~~~~  100 (371)
T PRK05166         36 PRIAKLGSNENPLGPSPAVRRAFADIAEL----------LRLYPDP-QG--RALREAIAARTGVPAD-RIILG-NGSEDL  100 (371)
T ss_pred             cceEEcCCCCCCCCCCHHHHHHHHHHHHH----------hhcCCCC-cH--HHHHHHHHHHhCcCHH-HEEEc-CCHHHH
Confidence            356777765  345677888888764322          1122211 11  2688889999999875 77764 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      +..++..++++||+|++..+.+....  ..++..| +++.++..+  ++  .+|+++++  +++++++|++++++||||.
T Consensus       101 l~~~~~~~~~~gd~vli~~P~y~~~~--~~~~~~g~~~~~v~~~~--~~--~~~~~~l~~~~~~~~~~v~l~~p~NPtG~  174 (371)
T PRK05166        101 IAVICRAVLRPGDRVVTLYPSFPLHE--DYPTMMGARVERVTVTP--DL--GFDLDALCAAVARAPRMLMFSNPSNPVGS  174 (371)
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHHH--HHHHHcCCeEEEeecCC--CC--CCCHHHHHHhhhcCCCEEEEeCCCCCCCC
Confidence            99999998899999987766655432  3456678 777777643  23  36778876  6778999999999999999


Q ss_pred             cCC--CCccc---cCCCcEEEEeccCcCCC---C-c--cc-cccc-c--EEEeCCCccccCCc--cEEEEE-cHHHHhcc
Q 043610          224 EFK--EYPSA---KNSTGILVADMSSNFCS---K-P--VD-VTRF-G--VIYAGAQKNVGPSG--VTIVIV-RKDLLGNA  285 (430)
Q Consensus       224 ~~p--ei~~~---~~~g~~lvvD~a~s~G~---~-~--id-l~~~-d--~~~~s~~K~~gp~G--~g~l~v-~~~~~~~~  285 (430)
                      +++  ++.++   .++++++++|+++..-.   . +  +. +.+. +  +++.|++|.+|.+|  +||+++ ++++++.+
T Consensus       175 ~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~  254 (371)
T PRK05166        175 WLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLL  254 (371)
T ss_pred             CCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHH
Confidence            999  45443   34588999999864221   1 1  11 1222 2  68899999999889  788877 56666654


Q ss_pred             CCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610          286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF  365 (430)
Q Consensus       286 ~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~  365 (430)
                      ....              .....+...+.++..+|..   .+.++...+.+++.++++.+.|++ .|+.+.+   + .+.
T Consensus       255 ~~~~--------------~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~-~g~~~~p---~-~g~  312 (371)
T PRK05166        255 DRVR--------------TPFNVNGAAQAAALAALDD---EEHLAKGVALALAERERLKKELAE-MGYRIAP---S-RAN  312 (371)
T ss_pred             HHhc--------------cCCCCCHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHH-CcCeeCC---C-cCC
Confidence            2211              1123455666666666642   124567778888888999999997 5776432   1 132


Q ss_pred             ceEEEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          366 MNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       366 ~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       .+.+.++.  .+.++.+.|.++||.+.+|..  ..+++||+++   +.++.++++++|++++.
T Consensus       313 -fl~~~~~~--~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~~  370 (371)
T PRK05166        313 -FLFFDARR--PASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVLE  370 (371)
T ss_pred             -EEEEeCCC--CHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence             23445432  234799999999999887642  3568999998   68889999999988753

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.89  E-value=5e-21  Score=194.44  Aligned_cols=327  Identities=17%  Similarity=0.162  Sum_probs=215.4

Q ss_pred             CCCCceeecCCCC------CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-----------
Q 043610           67 QEDRVFNFAAGPA------NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-----------  129 (430)
Q Consensus        67 ~~~~~~l~~~gp~------~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-----------  129 (430)
                      ..+.+++|+.|-.      .+++.+++++.+.+....        ...+.+.  .-..++|+.++++++           
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~--------~~~Y~~~--~G~~~Lr~aia~~~~~~~~~~~~~~~  100 (412)
T PTZ00433         31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQE--------CNGYPPT--VGSPEAREAVATYWRNSFVHKESLKS  100 (412)
T ss_pred             CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCC--------CCCCCCC--CCcHHHHHHHHHHHHhhccccccccC
Confidence            4556788887653      367889998887664210        1122111  012245566666554           


Q ss_pred             -CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c
Q 043610          130 -IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q  205 (430)
Q Consensus       130 -~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i  205 (430)
                       ++++ +|++ ++|+++++..++..++++||+|++..+++...  ...++..| ++..++..++..+  .+|+++++  +
T Consensus       101 ~~~~~-~i~i-t~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~--~~~~~~~g~~~~~i~~~~~~~~--~~d~~~l~~~~  174 (412)
T PTZ00433        101 TIKKD-NVVL-CSGVSHAILMALTALCDEGDNILVPAPGFPHY--ETVCKAYGIEMRFYNCRPEKDW--EADLDEIRRLV  174 (412)
T ss_pred             CCChh-hEEE-eCChHHHHHHHHHHhcCCCCEEEEccCCcccH--HHHHHHcCCEEEEEecCccccC--cCCHHHHHHHh
Confidence             4454 6776 58899999999999999999999887776553  24566778 8877877432223  47788887  5


Q ss_pred             CCCccEEEEeecCCCccccCC--CC---ccc-cCCCcEEEEeccCcC---CCCc-cccccc----c-EEEeCCCccccCC
Q 043610          206 NPDAKYLHICANETIHGVEFK--EY---PSA-KNSTGILVADMSSNF---CSKP-VDVTRF----G-VIYAGAQKNVGPS  270 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~---G~~~-idl~~~----d-~~~~s~~K~~gp~  270 (430)
                      ++++++|++++++||||..++  ++   .++ +++|+++++|+++..   ...+ ..+..+    . +++.|++|.+|.+
T Consensus       175 ~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p  254 (412)
T PTZ00433        175 DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVP  254 (412)
T ss_pred             ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCC
Confidence            778999999999999999998  44   443 578999999998752   2111 112222    2 6789999999988


Q ss_pred             c--cEEEEEc------HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          271 G--VTIVIVR------KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       271 G--~g~l~v~------~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      |  +|++++.      +++++.+....             ......+...+.++..+|+.-. ..-++++++++++.++.
T Consensus       255 GlRlG~~i~~~p~~~~~~~~~~~~~~~-------------~~~~~~~~~~q~a~~~~l~~~~-~~~~~~~~~~~~~~r~~  320 (412)
T PTZ00433        255 GWRLGWLLLVDPHGNGGDFLDGMKRLG-------------MLVCGPCSVVQAALGEALLNTP-QEHLEQIVAKLEEGAMV  320 (412)
T ss_pred             CeeEEEEEEeCCcccHHHHHHHHHHHh-------------hccCCCChHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHH
Confidence            8  8998872      34444321100             0112345667777776765311 12467788888899999


Q ss_pred             HHHHHHccCCceecCCCCCCCccceEEEEcCCC---c--hhHHHHHHHH-HcCCeecCCCC--CCCeeEEeecCCCCHHH
Q 043610          343 LYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS---D--LEAEFVKEAA-KEKMVQLKGHR--SVGGMRASIYNAMPLAG  414 (430)
Q Consensus       343 l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~---~--~~~~~~~~L~-~~Gi~~~~g~~--~~g~iRis~~~~~t~ed  414 (430)
                      +.+.|++..|+.+..  +  .....+.+.++..   +  .+.++++.|. ++||.+.+|..  ..+++||++..  .+++
T Consensus       321 l~~~L~~~~~~~~~~--p--~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~  394 (412)
T PTZ00433        321 LYNHIGECIGLSPTM--P--RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--PVEV  394 (412)
T ss_pred             HHHHHhcCCCCcccC--C--CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC--CHHH
Confidence            999998644655432  1  1222234455531   1  1337888886 57999888753  25689999975  5888


Q ss_pred             HHHHHHHHHHHHHhh
Q 043610          415 VEKLVAFMKDFQAKH  429 (430)
Q Consensus       415 v~~ll~~L~~~~~~~  429 (430)
                      +++.++.|+++++++
T Consensus       395 l~~al~~l~~~~~~~  409 (412)
T PTZ00433        395 LREAVERIKAFCERH  409 (412)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988765

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.89  E-value=7e-21  Score=192.87  Aligned_cols=327  Identities=14%  Similarity=0.105  Sum_probs=216.9

Q ss_pred             CCCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC------CCCcE
Q 043610           68 EDRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI------PQEYS  135 (430)
Q Consensus        68 ~~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~------~~~~~  135 (430)
                      ..+++.++.|-      .++++.+++++.+.+......        .+++.  .-..++|+.++++++.      +++ +
T Consensus        30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~--------~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~-~   98 (403)
T TIGR01265        30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN--------GYAPS--VGALAAREAVAEYLSSDLPGKLTAD-D   98 (403)
T ss_pred             CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC--------CCCCC--CCCHHHHHHHHHHHHhhcCCCCCHH-H
Confidence            45677777763      367788999988876531111        11111  1134677888888874      343 6


Q ss_pred             EEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEE
Q 043610          136 VLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYL  212 (430)
Q Consensus       136 vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv  212 (430)
                      ++++ +|+|+++..++.+++.+||+|++..+++...  ...++..| +++.++...+  .+..+|+++++  ++++++++
T Consensus        99 ii~t-~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v  173 (403)
T TIGR01265        99 VVLT-SGCSQAIEICIEALANPGANILVPRPGFPLY--DTRAAFSGLEVRLYDLLPE--KDWEIDLDGLEALADEKTVAI  173 (403)
T ss_pred             EEEe-cChHHHHHHHHHHhCCCCCEEEEeCCCchhH--HHHHHHcCCEEEEecCCcc--cCCccCHHHHHHHhCcCccEE
Confidence            7764 7899999999999989999999877765543  34556677 7777765322  12247888887  67889999


Q ss_pred             EEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---CCc-cccccc----c-EEEeCCCccccCCc--cEEE
Q 043610          213 HICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---SKP-VDVTRF----G-VIYAGAQKNVGPSG--VTIV  275 (430)
Q Consensus       213 ~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~~-idl~~~----d-~~~~s~~K~~gp~G--~g~l  275 (430)
                      ++++++||||..++  +   |.++ +++|+++++|++++.-   ..+ ..+..+    . +++.|++|.++.+|  +|++
T Consensus       174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~  253 (403)
T TIGR01265       174 VVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWI  253 (403)
T ss_pred             EEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEE
Confidence            99999999999998  3   4443 5889999999987522   211 122222    2 67799999998778  8888


Q ss_pred             EEc-H-H-----HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          276 IVR-K-D-----LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       276 ~v~-~-~-----~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      ++. + +     +++.+..       +      ......++...+.++..+|+... ..-+++.++++++.++.+.+.|+
T Consensus       254 v~~~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~  319 (403)
T TIGR01265       254 IIHDPHGIFRDTVLQGLKN-------L------LQRILGPATIVQGALPDILENTP-QEFFDGKISVLKSNAELCYEELK  319 (403)
T ss_pred             EEeCchhhhHHHHHHHHHH-------H------hhhhcCCChHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHh
Confidence            874 2 2     2222110       0      00112356677777777775311 12456778888888899999998


Q ss_pred             ccCCceecCCCCCCCccceEEEEcCCCc-----hhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHH
Q 043610          349 GSNGFYKCPVEKSVRSFMNVPFTLEKSD-----LEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       349 ~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~  420 (430)
                      ...|+.+..  + ..+ .-+.+.+++..     .+.++++.| +++||.+.+|..  ..+++|||+..  .++.+++.++
T Consensus       320 ~~~~~~~~~--p-~~g-~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~  393 (403)
T TIGR01265       320 DIPGLVCPK--P-EGA-MYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV--PESMLEEACS  393 (403)
T ss_pred             cCCCceecC--C-Cce-eEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC--CHHHHHHHHH
Confidence            644665321  1 122 23445565311     233787775 678999988753  35689999984  6888999999


Q ss_pred             HHHHHHHhhC
Q 043610          421 FMKDFQAKHA  430 (430)
Q Consensus       421 ~L~~~~~~~~  430 (430)
                      .|++++++||
T Consensus       394 ~l~~~~~~~~  403 (403)
T TIGR01265       394 RIKEFCERHA  403 (403)
T ss_pred             HHHHHHHhcC
Confidence            9999999886

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.89  E-value=7.4e-22  Score=196.36  Aligned_cols=272  Identities=11%  Similarity=0.108  Sum_probs=186.8

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT  195 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g  195 (430)
                      +++++.+++++|++++ +|++ ++|+++++..++..++++| |+|++..+++..+.  ..++..| +++.++..+  ++ 
T Consensus        60 ~~l~~~~a~~~g~~~~-~I~~-~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~--~~~~~~G~~~~~v~~~~--~~-  132 (351)
T PRK01688         60 KAVIENYAAYAGVKPE-QVLV-SRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS--VSAETIGVEIRTVPTLD--NW-  132 (351)
T ss_pred             HHHHHHHHHHhCCCHH-HEEE-cCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH--HHHHHcCCEEEEeecCC--CC-
Confidence            4788899999999886 7776 4889999999999998887 88887766654432  3466678 877777643  23 


Q ss_pred             CCCCccccc-cCCCccEEEEeecCCCccccCC--CCccc---cCCCcEEEEeccCcCCCCc---cc-ccccc--EEEeCC
Q 043610          196 KIPNFDALE-QNPDAKYLHICANETIHGVEFK--EYPSA---KNSTGILVADMSSNFCSKP---VD-VTRFG--VIYAGA  263 (430)
Q Consensus       196 ~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei~~~---~~~g~~lvvD~a~s~G~~~---id-l~~~d--~~~~s~  263 (430)
                       .+|+++++ .-+++++|++|+++||||.+++  ++.++   .+.+.++++|+++.--...   .+ +...+  +++.|+
T Consensus       133 -~~d~~~l~~~~~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSf  211 (351)
T PRK01688        133 -QLDLPAIADNLDGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTL  211 (351)
T ss_pred             -CCCHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecc
Confidence             47788776 2268999999999999999999  55553   2336899999986422211   11 12233  788999


Q ss_pred             CccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          264 QKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       264 ~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      +|++|++|  +|+++.++++++.+.+..+              +...+...+.++..+|+.-. ..-+++..+++.+.++
T Consensus       212 SK~~glaGlRiGy~i~~~~~i~~l~~~~~--------------~~~v~~~~~~~a~~~L~~~~-~~~~~~~~~~~~~~r~  276 (351)
T PRK01688        212 SKAFALAGLRCGFTLANEEVINLLLKVIA--------------PYPLSTPVADIAAQALSPQG-IAAMRERVAEINANRQ  276 (351)
T ss_pred             hHhhcCHHHHHhHHhCCHHHHHHHHhccC--------------CCCCCHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHH
Confidence            99999989  6999999999877543221              11234444444445554210 0124455666777788


Q ss_pred             HHHHHHHccCCce-ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC---CCCCeeEEeecCCCCHHHHHH
Q 043610          342 LLYNVIDGSNGFY-KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH---RSVGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       342 ~l~~~l~~~~G~~-~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~---~~~g~iRis~~~~~t~edv~~  417 (430)
                      ++.+.|.+..|+. +.+   + .++ -+.+.+++   ..++.+.|.++||.+..+.   +..+++|||++   +++|+++
T Consensus       277 ~l~~~L~~~~~~~~~~p---s-~~n-fi~~~~~~---~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~  345 (351)
T PRK01688        277 WLIAALKEIPCVEQVFD---S-ETN-YILARFTA---SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQR  345 (351)
T ss_pred             HHHHHHHhCCCCCeECC---C-CCc-EEEEEcCC---HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHH
Confidence            9999998744653 332   1 122 23345542   3478899999999886532   22468999998   7899999


Q ss_pred             HHHHHH
Q 043610          418 LVAFMK  423 (430)
Q Consensus       418 ll~~L~  423 (430)
                      ++++|+
T Consensus       346 l~~al~  351 (351)
T PRK01688        346 VIDALR  351 (351)
T ss_pred             HHHhhC
Confidence            999874

>PRK08912 hypothetical protein; Provisional

Probab=99.89  E-value=4.2e-21  Score=193.43  Aligned_cols=325  Identities=15%  Similarity=0.113  Sum_probs=212.4

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~  145 (430)
                      ..++|+.|-  .+.|+.+.+++.+.+.+    +...|...   ....+..+.+.+.+.+.+|.  .++.+|++ ++|+++
T Consensus        27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~----~~~~Y~~~---~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~-t~G~~~   98 (387)
T PRK08912         27 GAINLGQGFPDDPGPEDVRRAAADALLD----GSNQYPPM---MGLPELRQAVAAHYARFQGLDLDPETEVMV-TSGATE   98 (387)
T ss_pred             CeEEccCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCC---CCcHHHHHHHHHHHHHHhCCCCCCcccEEE-eCCcHH
Confidence            456776652  23467788887766532    11111111   11233344555555555565  33225666 478999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      ++..++..++++||+|++..+.+...  ...++..| +++.++...+ ++  .+|+++++  +++++++|++++++||||
T Consensus        99 al~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~-~~--~~~~~~l~~~~~~~~~~v~l~~p~NPtG  173 (387)
T PRK08912         99 ALAAALLALVEPGDEVVLFQPLYDAY--LPLIRRAGGVPRLVRLEPP-HW--RLPRAALAAAFSPRTKAVLLNNPLNPAG  173 (387)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCchhh--HHHHHHcCCEEEEEecCcc-cC--cCCHHHHHHHhCccceEEEEeCCCCCcC
Confidence            99999999899999999877765543  23566778 7777776421 23  46778886  678899999999999999


Q ss_pred             ccCC--C---Cccc-cCCCcEEEEeccCcC---CC---Cc-cccc---cccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          223 VEFK--E---YPSA-KNSTGILVADMSSNF---CS---KP-VDVT---RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       223 ~~~p--e---i~~~-~~~g~~lvvD~a~s~---G~---~~-idl~---~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      .+++  +   |.++ +++++++++|+++..   +.   .+ ..+.   +..+++.|++|.+|++|  +|++++++++++.
T Consensus       174 ~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~  253 (387)
T PRK08912        174 KVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRV  253 (387)
T ss_pred             cccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHH
Confidence            9999  3   4443 588999999998742   11   11 1122   22488999999999889  9999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +.....            ....+.+...+.++..++....  ..++++++++++.++.+++.|++ .|+.+.+  +  .+
T Consensus       254 l~~~~~------------~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~g  314 (387)
T PRK08912        254 LAKAHQ------------FLTFTTPPNLQAAVAYGLGKPD--DYFEGMRADLARSRDRLAAGLRR-IGFPVLP--S--QG  314 (387)
T ss_pred             HHHHHh------------hccccCChHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHh-CCCcccC--C--Cc
Confidence            432110            0112233334555555553211  13567888899999999999986 5776543  1  12


Q ss_pred             cceEEEEcCC-C-ch-hHHHHHHH-HHcCCeecCCCCC------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          365 FMNVPFTLEK-S-DL-EAEFVKEA-AKEKMVQLKGHRS------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       365 ~~iv~f~~~~-~-~~-~~~~~~~L-~~~Gi~~~~g~~~------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...+.+.+++ . .. +.++.+.| +++||.+.+|...      .+++|++++.  ++++++..++.|+++++|
T Consensus       315 ~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~~  386 (387)
T PRK08912        315 TYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAARRR  386 (387)
T ss_pred             ceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence            2345556653 1 12 33688887 4679998876421      3589999996  589999999999998775

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.89  E-value=5.2e-21  Score=193.26  Aligned_cols=323  Identities=13%  Similarity=0.087  Sum_probs=206.7

Q ss_pred             CCCceeecCCC-C-CCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEEeC
Q 043610           68 EDRVFNFAAGP-A-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLNI--PQEYSVLFLQG  141 (430)
Q Consensus        68 ~~~~~l~~~gp-~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~  141 (430)
                      ++.++.|+.|- . +.|+.+++++.+.+.+..        ...+.+  ...+..+.+.+.+.+.+|.  .++..+++ ++
T Consensus        34 g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~--------~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~v-t~  104 (394)
T PRK05942         34 GLDLIDLGMGNPDGAAPQPVIEAAIAALADPQ--------NHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALP-LL  104 (394)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC--------CccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEE-cc
Confidence            34566666543 2 245667887776653210        111111  1123333444555444464  34323554 57


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      |+++++..++..+++|||+|++..+.+.++.  ..++..| +++.++...+  .+..+|+++++  +++++++|++++++
T Consensus       105 G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~~~~~~k~i~l~~P~  180 (394)
T PRK05942        105 GSKEGLTHLALAYVNPGDVVLVPSPAYPAHF--RGPLIAGAQIYPIILKPE--NDWLIDLSSIPEEVAQQAKILYFNYPS  180 (394)
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCCcchH--HHHHHcCCEEEEeecCCc--cCCccCHHHHHHhccccceEEEEcCCC
Confidence            8999999999999999999998887766542  2345667 7777776432  22247888886  67899999999999


Q ss_pred             CCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cccc---cc---cccEEEeCCCccccCCc--cEEEEEcHH
Q 043610          219 TIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVD---VT---RFGVIYAGAQKNVGPSG--VTIVIVRKD  280 (430)
Q Consensus       219 t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~id---l~---~~d~~~~s~~K~~gp~G--~g~l~v~~~  280 (430)
                      ||||..++  +   |.++ +++|+++++|+++....    ....   +.   +..+++.|++|.+|.+|  +|+++.+++
T Consensus       181 NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~  260 (394)
T PRK05942        181 NPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRH  260 (394)
T ss_pred             CCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHH
Confidence            99999999  3   4443 58899999999875321    1111   22   22477899999999888  899999999


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +++.+.....            ....+.+...+.++..+|+...  ..++.++++++++++++.+.|.+ .|+.+.+  +
T Consensus       261 l~~~l~~~~~------------~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~--~  323 (394)
T PRK05942        261 IIQGLRTLKT------------NLDYGIFSALQKAAETALQLPD--SYLQQVQERYRTRRDFLIQGLGE-LGWNIPP--T  323 (394)
T ss_pred             HHHHHHHHHh------------hcccCCCHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHH-CCCeecC--C
Confidence            8876532110            0112345567777777886433  25678889999999999999986 5776542  1


Q ss_pred             CCCccceEEEEcCCCchhHHHHHH-HHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          361 SVRSFMNVPFTLEKSDLEAEFVKE-AAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~~~~~~-L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                        .+...+.+.+++...+.++..+ |.++||.+.+|..    ..+++||++..     +.+++.++|+++.+
T Consensus       324 --~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-----~~~~l~~~l~~l~~  388 (394)
T PRK05942        324 --KATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-----DCDRLGEALDRLKQ  388 (394)
T ss_pred             --CeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-----CHHHHHHHHHHHHH
Confidence              1322344566642123367765 5678999877642    24589999962     34555555555543

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.89  E-value=4e-21  Score=190.99  Aligned_cols=310  Identities=14%  Similarity=0.108  Sum_probs=201.9

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHHHHHHHHhhcCCC
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATTQFAAVPLNLCTP  157 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~a~~~~~~sl~~~  157 (430)
                      +.++.+.+++.+.....     ..|...   ....++.+.+.+.+.+..|.  +++.+|++ ++|+++++..++..++++
T Consensus        13 ~~~~~~~~~~~~~~~~~-----~~Y~~~---~G~~~lr~aia~~~~~~~g~~~~~~~~Iii-t~Gs~~ai~~~~~~~~~~   83 (350)
T TIGR03537        13 PTPPFIRKALIDAVPEV-----SQYPSA---LGTKALREAISGWFERRFGVKLDPDAQVLP-SAGSKEAIFHFPLVFIDP   83 (350)
T ss_pred             CCCHHHHHHHHHHHhcc-----CCCCCC---CCCHHHHHHHHHHHHHHhCCCCCCCCcEEE-cCChHHHHHHHHHHHcCC
Confidence            45778888887764321     111111   11223334444555555574  33225665 588999999999988887


Q ss_pred             C---CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCc
Q 043610          158 N---DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYP  229 (430)
Q Consensus       158 g---d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~  229 (430)
                      |   |+|++..+++..+.  ..++..| +++.++...+  .|..+|+++++  ++++++++++++++||||...+  ++.
T Consensus        84 g~~~d~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~  159 (350)
T TIGR03537        84 EEDRRRVIFGTPGYPVYE--RGALFAGGEPTAVKLKKE--DGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLK  159 (350)
T ss_pred             CCCCceEEEcCCCCcchH--HHHHhcCCEEEEcccCcc--cCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHH
Confidence            7   68887777665542  3456677 7777776432  23347888887  6778999999999999999999  344


Q ss_pred             c---c-cCCCcEEEEeccCc---CCCCccccccc--c--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCcccccc
Q 043610          230 S---A-KNSTGILVADMSSN---FCSKPVDVTRF--G--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYK  296 (430)
Q Consensus       230 ~---~-~~~g~~lvvD~a~s---~G~~~idl~~~--d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~  296 (430)
                      +   + +++|+++++|+++.   ++..+..+..+  +  +++.|++|.+|.+|  +|+++.++++++.+.....      
T Consensus       160 ~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~------  233 (350)
T TIGR03537       160 ETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRA------  233 (350)
T ss_pred             HHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHH------
Confidence            4   3 58899999999975   33332223222  3  67789999999888  8999888887765432110      


Q ss_pred             chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc
Q 043610          297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       297 ~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~  376 (430)
                          .  ...+.+...+.++..++..   ...++.++++++++++.+.+.|.+ .|+++.+  + . +...+.+.+++..
T Consensus       234 ----~--~~~~~~~~~q~~~~~~l~~---~~~~~~~r~~l~~~~~~~~~~l~~-~g~~~~~--~-~-g~~~~~~~~~~~~  299 (350)
T TIGR03537       234 ----N--FGVASPDFVQAAAKAAWSD---DNHVLERRKIFKRKRDLFIEFFNK-VGLEYLY--P-D-ATFYLWVKVPSGI  299 (350)
T ss_pred             ----h--hccCCCHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHH-CCCcccC--C-C-eEEEEEEECCCCC
Confidence                0  0112333445555555542   224567788889999999999986 5776442  1 1 2223445676421


Q ss_pred             hhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          377 LEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       377 ~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      ...++++.|.++||.+.+|...    .+++||++.  .+++++++.++.|++
T Consensus       300 ~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       300 DAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV--PTLEECEEALRLWER  349 (350)
T ss_pred             CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence            2347999999999998876532    467999986  478899998888764

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.89  E-value=1.4e-20  Score=189.93  Aligned_cols=328  Identities=13%  Similarity=0.149  Sum_probs=212.6

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT  144 (430)
                      +.++.++.|-  ...++.+.+++.+.+...    .+.|...   ....+..+.+.+.+...+|.+  ++.+|++ ++|++
T Consensus        30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~~---~g~~~lr~~ia~~~~~~~~~~~~~~~~i~i-t~G~~  101 (391)
T PRK07309         30 PGILKLTLGEPDFTTPDHVKEAAKRAIDAN----QSHYTGM---AGLLELRQAAADFVKEKYNLDYAPENEILV-TIGAT  101 (391)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHhcC----CCCCCCC---CCcHHHHHHHHHHHHHHhCCCCCCCCcEEE-eCChH
Confidence            4466666543  344677888888766421    1111111   112233334444444444542  2226766 58899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC---CCccEEEEeecC
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN---PDAKYLHICANE  218 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~---~~~~lv~i~~~~  218 (430)
                      +++++++..++++||+|++..+++.+.  ...++..| ++..++..+   .+..+|+++++  +.   +++++|++++++
T Consensus       102 ~al~~~~~~~~~~gd~vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~  176 (391)
T PRK07309        102 EALSASLTAILEPGDKVLLPAPAYPGY--EPIVNLVGAEIVEIDTTE---NDFVLTPEMLEKAILEQGDKLKAVILNYPA  176 (391)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCCcch--HHHHHHcCCEEEEEecCC---cCCcCCHHHHHHHhhccCCCeEEEEEECCC
Confidence            999999999999999999887776654  34556677 777777532   22346777776  43   468999999999


Q ss_pred             CCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cccccccc--c--EEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          219 TIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTRF--G--VIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       219 t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~~--d--~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      ||||..++  +   |.++ +++|+++++|++++...    ...++..+  +  +++.|++|.+|.+|  +|+++.+++++
T Consensus       177 NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~  256 (391)
T PRK07309        177 NPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFT  256 (391)
T ss_pred             CCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHH
Confidence            99999998  3   4443 58899999999976322    22233222  3  78899999999779  89999999988


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+....+    +        ...+++...+.++..+|+....  .....++++++.++++.+.|++ .|+.+.+  +. 
T Consensus       257 ~~~~~~~~----~--------~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~--p~-  318 (391)
T PRK07309        257 AQLIKSHQ----Y--------LVTAATTMAQFAAVEALTNGKD--DALPMKKEYIKRRDYIIEKMTD-LGFKIIK--PD-  318 (391)
T ss_pred             HHHHHHHh----h--------cccCCChHHHHHHHHHHhCChh--HHHHHHHHHHHHHHHHHHHHHH-CCCeecC--CC-
Confidence            76432111    0        1124556667777766653111  1244567778888899999986 5776543  11 


Q ss_pred             CccceEEEEcCCC-c-hhHHHHHHH-HHcCCeecCCCC--C--CCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          363 RSFMNVPFTLEKS-D-LEAEFVKEA-AKEKMVQLKGHR--S--VGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       363 rs~~iv~f~~~~~-~-~~~~~~~~L-~~~Gi~~~~g~~--~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                       ....+.+.+++. . .+.++.++| .++||.+.+|..  .  .++|||++..  +.+++++.++.|++++++++
T Consensus       319 -gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~~  390 (391)
T PRK07309        319 -GAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA--SMETIKEAMKRLKEYMEEHA  390 (391)
T ss_pred             -eeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhhc
Confidence             122234466642 1 123688765 568999988752  2  4589999985  68899999999999998874

>PLN02187 rooty/superroot1

Probab=99.89  E-value=1.3e-20  Score=193.74  Aligned_cols=332  Identities=15%  Similarity=0.168  Sum_probs=215.4

Q ss_pred             CCCCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCc
Q 043610           67 QEDRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEY  134 (430)
Q Consensus        67 ~~~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~  134 (430)
                      +.+.++.++.|.      ...|+.+.+++.+.+......+   |..   ...    ..++|+.++++++      ++++ 
T Consensus        64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~---Y~~---~~G----~~~lR~aiA~~~~~~~~~~~~~~-  132 (462)
T PLN02187         64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNS---YGP---GAG----ILPARRAVADYMNRDLPHKLTPE-  132 (462)
T ss_pred             CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCC---CCC---CCC----hHHHHHHHHHHHHHhcCCCCCcc-
Confidence            356788888872      2356788888887664211111   101   111    2345566666653      4565 


Q ss_pred             EEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccE
Q 043610          135 SVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKY  211 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~l  211 (430)
                      +|+++ +|+++++..++..+++|||+|++..+++..+.  ..++..| +++.++..+...|  .+|+++++  +++++++
T Consensus       133 ~I~it-~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~--~~~~~~g~~~~~~~l~~~~~~--~~d~~~l~~~~~~~~~~  207 (462)
T PLN02187        133 DIFLT-AGCNQGIEIVFESLARPNANILLPRPGFPHYD--ARAAYSGLEVRKFDLLPEKEW--EIDLEGIEAIADENTVA  207 (462)
T ss_pred             cEEEe-CCHHHHHHHHHHHhcCCCCEEEEeCCCCccHH--HHHHHcCCEEEEEeCccccCC--ccCHHHHHHhcCCCcEE
Confidence            67764 78999999999999999999998888776543  2456677 8877776432234  47888887  6788999


Q ss_pred             EEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC---CCCc-cccccc---c--EEEeCCCccccCCc--cEE
Q 043610          212 LHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF---CSKP-VDVTRF---G--VIYAGAQKNVGPSG--VTI  274 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~---G~~~-idl~~~---d--~~~~s~~K~~gp~G--~g~  274 (430)
                      +++++++||||.+++  +   |.++ +++|+++++|+++.-   +..+ ..+..+   +  +++.|++|.++.+|  +||
T Consensus       208 v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~  287 (462)
T PLN02187        208 MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGW  287 (462)
T ss_pred             EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEE
Confidence            999999999999999  3   4443 578999999998763   3222 233322   1  67799999999889  899


Q ss_pred             EEEc-HH-HH---hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          275 VIVR-KD-LL---GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       275 l~v~-~~-~~---~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      +++. ++ .+   +.+....          ........++.+.+.++..+|+.-. ...++.+++.+++.++++++.|++
T Consensus       288 ~v~~~p~~~~~~~~~~~~~~----------~~~~~~~~~s~~~Q~a~~~~L~~~~-~~~l~~~~~~l~~~r~~l~~~L~~  356 (462)
T PLN02187        288 IALNDPEGVFETTKVLQSIK----------QNLDVTPDPATIIQAALPAILEKAD-KNFFAKKNKILKHNVDLVCDRLKD  356 (462)
T ss_pred             EEecCchhHHHHHHHHHHHH----------HhccccCCCCHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9884 33 22   2221100          0001112356778888888886311 124677888889999999999987


Q ss_pred             cCCceecCCCCCCCccceEEEEcCC---Cch--hHHHHHH-HHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEK---SDL--EAEFVKE-AAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~---~~~--~~~~~~~-L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~  421 (430)
                      . +.......+ . ..+-+.+.++.   .+.  +.+++.+ +.++||.+.+|..  ..++|||+++.  .++.++..++.
T Consensus       357 ~-~~~~~~~~P-~-gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~--~~e~l~~al~r  431 (462)
T PLN02187        357 I-PCVVCPKKP-E-SCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV--EAHMLEDALER  431 (462)
T ss_pred             C-CCCcCCCCC-C-EeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC--CHHHHHHHHHH
Confidence            3 332211112 1 21223234431   111  3356655 4788999988753  35689999985  68889999999


Q ss_pred             HHHHHHhhC
Q 043610          422 MKDFQAKHA  430 (430)
Q Consensus       422 L~~~~~~~~  430 (430)
                      |++++++|+
T Consensus       432 L~~~l~~~~  440 (462)
T PLN02187        432 LKGFCTRHA  440 (462)
T ss_pred             HHHHHHHhh
Confidence            999988774

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.89  E-value=1.4e-20  Score=190.61  Aligned_cols=320  Identities=14%  Similarity=0.123  Sum_probs=209.6

Q ss_pred             CCceeecCCC---CCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP---ANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp---~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ++.++|+..-   -..+|.|++++.+.+.++. +.+.|.. .+    .......++++.+++++|.+   ..+++ ++|+
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~-~~----g~~~~~~~Le~~la~~~g~~---~~l~~-~sG~  115 (402)
T TIGR01821        45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRN-IS----GTNIPHVELEAELADLHGKE---SALVF-TSGY  115 (402)
T ss_pred             eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhh-hh----CCcHHHHHHHHHHHHHhCCC---eEEEE-CchH
Confidence            3455665532   2457789999999987653 2222211 00    11245668999999999964   34555 5789


Q ss_pred             HHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c---CC-CccEEEEe
Q 043610          145 TQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q---NP-DAKYLHIC  215 (430)
Q Consensus       145 ~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i---~~-~~~lv~i~  215 (430)
                      +++..++..+..  +++.| +.+..+++. ...-.+..| ++..++.         .|.++++  +   .+ ++++|+++
T Consensus       116 ~an~~ai~~l~~~~~~~~v-~~~~~~h~s-~~~~~~~~g~~~~~~~~---------~d~~~l~~~l~~~~~~~~~~v~~e  184 (402)
T TIGR01821       116 VANDATLATLAKIIPGCVI-FSDELNHAS-MIEGIRHSGAEKFIFRH---------NDVAHLEKLLQSVDPNRPKIIAFE  184 (402)
T ss_pred             HHHHHHHHHhhCCCCCCEE-EEcchHhHH-HHHHHHHcCCeEEEECC---------CCHHHHHHHHHhccCCCCeEEEEc
Confidence            999988877654  55543 344322221 222233345 4332221         2444444  2   23 68999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-c--------ccc-ccccEEEeCCCccccCCccEEEEEcHHHH
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-P--------VDV-TRFGVIYAGAQKNVGPSGVTIVIVRKDLL  282 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-~--------idl-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~  282 (430)
                      +++|++|.+.|  +|.++ +++|+++++|++|++|.. +        .++ ++.|+++.+++|.+|..| |+++.+++++
T Consensus       185 ~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~i~~~~~~~  263 (402)
T TIGR01821       185 SVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG-GYIAASRKLI  263 (402)
T ss_pred             CCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC-ceeecCHHHH
Confidence            99999999999  78886 689999999999986642 1        122 234788899999999878 8888898887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+....+.+          ...++.+...++++.++|+.+.+  . +.+.++..++++++++.|++ .|+.+++  +  
T Consensus       264 ~~l~~~~~~~----------~~t~~~~~~~~aaa~aaL~~~~~--~-~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--  325 (402)
T TIGR01821       264 DAIRSYAPGF----------IFTTSLPPAIAAGATASIRHLKE--S-QDLRRAHQENVKRLKNLLEA-LGIPVIP--N--  325 (402)
T ss_pred             HHHHHhCcCc----------eecCcCCHHHHHHHHHHHHHhhc--C-HHHHHHHHHHHHHHHHHHHH-cCCCcCC--C--
Confidence            7643211110          01134566677888889997763  2 66777888999999999986 6876553  1  


Q ss_pred             CccceEEEEcCCCchhHHHHHHHH-HcCCeecCC---CC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKG---HR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g---~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++ ++.+.+++.....++.++|. ++||.+.+.   ..  ...++||+++.+++++||++++++|+++++.
T Consensus       326 ~~~-i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~  396 (402)
T TIGR01821       326 PSH-IVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDR  396 (402)
T ss_pred             CCC-EEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence            243 45565543112236888876 459987541   11  1247999999999999999999999998764

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.89  E-value=1.6e-20  Score=190.49  Aligned_cols=320  Identities=14%  Similarity=0.097  Sum_probs=207.9

Q ss_pred             CCceeecCCC---CCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP---ANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp---~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ++.++|+..-   ...+|.|++++.+.+.++. +.+.+.   ..+  ......+++++.|++++|.+   ..+++ ++|+
T Consensus        46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~---~~~--g~~~~~~~l~~~la~~~g~~---~~~~~-~sG~  116 (407)
T PRK09064         46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTR---NIS--GTNHYHVELERELADLHGKE---AALVF-TSGY  116 (407)
T ss_pred             ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcC---cCc--cCHHHHHHHHHHHHHHhCCC---cEEEE-CcHH
Confidence            4466676641   2447789999999887642 222111   011  11345678999999999964   33454 5678


Q ss_pred             HHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c---C-CCccEEEEe
Q 043610          145 TQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q---N-PDAKYLHIC  215 (430)
Q Consensus       145 ~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i---~-~~~~lv~i~  215 (430)
                      +++..++..+..  +++ +++.+..+.+. ...-.+..+ +...++         ..|+++++  +   . +++++|+++
T Consensus       117 ~an~~ai~~l~~~~~~~-~i~~~~~~h~s-~~~~~~~~~~~~~~~~---------~~d~~~le~~l~~~~~~~~~~v~~~  185 (407)
T PRK09064        117 VSNDATLSTLAKLIPDC-VIFSDELNHAS-MIEGIRRSRCEKHIFR---------HNDVAHLEELLAAADPDRPKLIAFE  185 (407)
T ss_pred             HHHHHHHHHHhCCCCCC-EEEEeCcchHH-HHHHHHHcCCcEEEEC---------CCCHHHHHHHHHhccCCCCeEEEEe
Confidence            888877776643  554 44344222221 112223344 332222         13445554  2   2 578999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-c--------ccc-ccccEEEeCCCccccCCccEEEEEcHHHH
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-P--------VDV-TRFGVIYAGAQKNVGPSGVTIVIVRKDLL  282 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-~--------idl-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~  282 (430)
                      ++.+++|.+.|  +|.++ +++|+++++|++|++|.. +        .++ ++.|+++.+++|.+|+.| |+++.+++++
T Consensus       186 ~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~~~~~~~~~  264 (407)
T PRK09064        186 SVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG-GYIAGSAALV  264 (407)
T ss_pred             CCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC-ceEecCHHHH
Confidence            99999999999  78886 689999999999985531 1        122 234788999999999888 9999998887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+....+.+          ...++.+...++++.++++++.+.   ...+++..++++++++.|.+ .|+.+++  +  
T Consensus       265 ~~l~~~~~~~----------~~t~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--  326 (407)
T PRK09064        265 DAVRSYAPGF----------IFTTSLPPAIAAAALASIRHLKES---NEERERHQERAAKLKAALDA-AGIPVMP--N--  326 (407)
T ss_pred             HHHHHhCccc----------cccCcCCHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHH-cCCCCCC--C--
Confidence            7543211110          011234456677778889887632   45678889999999999997 6877653  1  


Q ss_pred             CccceEEEEcCCCchhHHHHHHHH-HcCCeecCCC---CC--CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGH---RS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~---~~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++ ++.+.+++.....++.++|. ++||.+.+..   ..  .+++|||++.+++++|+++++++|++++++
T Consensus       327 ~~~-iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~  397 (407)
T PRK09064        327 ESH-IVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWAR  397 (407)
T ss_pred             CCC-EEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence            233 45666653111236888885 4699975421   11  246999999999999999999999998764

>PRK03321 putative aminotransferase; Provisional

Probab=99.88  E-value=5.1e-21  Score=190.35  Aligned_cols=307  Identities=14%  Similarity=0.099  Sum_probs=208.6

Q ss_pred             CceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           70 RVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .++.++.|  +.++++.+++++.+.+....          ++..   .-..++|+.+++++|++++ +|++ ++|+++++
T Consensus        23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~----------~y~~---~g~~~lr~~ia~~~~~~~~-~I~~-~~G~~~~l   87 (352)
T PRK03321         23 GAIKLSSNETPFGPLPSVRAAIARAAAGVN----------RYPD---MGAVELRAALAEHLGVPPE-HVAV-GCGSVALC   87 (352)
T ss_pred             cceeccCCCCCCCCCHHHHHHHHHHHHhcC----------cCCC---CcHHHHHHHHHHHhCcCHH-HEEE-CCCHHHHH
Confidence            45666665  34567799999988764321          1111   1246888999999998775 6776 57899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~  224 (430)
                      ..++..+++|||+|++..+.+..+.  ..++..| +++.++..+  ++  .+|+++++  +++++++|++++++||||.+
T Consensus        88 ~~~~~~~~~~gd~Vli~~p~y~~~~--~~~~~~g~~~~~v~~~~--~~--~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~  161 (352)
T PRK03321         88 QQLVQATAGPGDEVIFAWRSFEAYP--ILVQVAGATPVQVPLTP--DH--THDLDAMAAAITDRTRLIFVCNPNNPTGTV  161 (352)
T ss_pred             HHHHHHhcCCCCEEEeCCCCHHHHH--HHHHHcCCEEEEccCCC--CC--CCCHHHHHHhhccCCCEEEEeCCCCCcCCC
Confidence            9888888899999987655543332  2355667 777776642  12  36778876  67789999999999999999


Q ss_pred             CC--CCccc---cCCCcEEEEeccCc---CCCCc---cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCC
Q 043610          225 FK--EYPSA---KNSTGILVADMSSN---FCSKP---VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       225 ~p--ei~~~---~~~g~~lvvD~a~s---~G~~~---id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~  288 (430)
                      .|  ++.++   +++++++++|+++.   ++...   +. ++..+  +++.|++|.+|.+|  +|++++++++++.+...
T Consensus       162 ~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~  241 (352)
T PRK03321        162 VTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKV  241 (352)
T ss_pred             cCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHh
Confidence            99  66664   24689999999875   22211   11 11122  67789999999888  89999998888765321


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                                    ....+.+...+.++..+|+...   .+.+..++..+.++.+.+.|.+ .|+.+.+   . .+ ..+
T Consensus       242 --------------~~~~~~s~~~q~~a~~~l~~~~---~~~~~~~~~~~~r~~~~~~L~~-~~~~~~~---~-~g-~~i  298 (352)
T PRK03321        242 --------------AVPFSVNSLAQAAAIASLAAED---ELLERVDAVVAERDRVRAALRA-AGWTVPP---S-QA-NFV  298 (352)
T ss_pred             --------------cCCCCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHH-CCCccCC---C-CC-CEE
Confidence                          1123556677777766765322   2334444455556778888886 5765421   1 23 234


Q ss_pred             EEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       369 ~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .+.++.  ...++.+.|.++||.+.+ . ...+|||+++   +.+++++++++|+++++
T Consensus       299 ~i~l~~--~~~~~~~~l~~~gI~v~~-~-~~~~iRi~~~---~~~~~~~~~~al~~~~~  350 (352)
T PRK03321        299 WLPLGE--RTADFAAAAAEAGVVVRP-F-AGEGVRVTIG---APEENDAFLRAARAWRA  350 (352)
T ss_pred             EEeCCC--CHHHHHHHHHHCCEEEEc-c-CCCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence            455542  234799999999998765 2 1236999986   79999999999998765

>PRK08363 alanine aminotransferase; Validated

Probab=99.88  E-value=6.4e-21  Score=192.83  Aligned_cols=328  Identities=12%  Similarity=0.120  Sum_probs=207.5

Q ss_pred             CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C--CCCCcEE
Q 043610           68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N--IPQEYSV  136 (430)
Q Consensus        68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g--~~~~~~v  136 (430)
                      ...+++++.|-.     ++++.+.+++.+.+...    .+.|..   ....    .++|+.+++++    |  ++++ +|
T Consensus        29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~----~~~Y~~---~~g~----~~lr~~ia~~~~~~~g~~~~~~-~i   96 (398)
T PRK08363         29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG----HNYYGP---SEGL----PELREAIVKREKRKNGVDITPD-DV   96 (398)
T ss_pred             CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC----CCCCCC---CCCc----HHHHHHHHHHHHHhcCCCCChh-hE
Confidence            356777776553     57888999888766421    111111   1112    24445555554    4  4554 67


Q ss_pred             EEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEE
Q 043610          137 LFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLH  213 (430)
Q Consensus       137 v~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~  213 (430)
                      +++ +|+++|+..++..++++||+|++..+.+.+..  ..++..| ++..++..+  +.+..+|+++++  +++++++|+
T Consensus        97 ~it-~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~v~~~~~~--~~~~~~d~~~l~~~~~~~~~~v~  171 (398)
T PRK08363         97 RVT-AAVTEALQLIFGALLDPGDEILIPGPSYPPYT--GLVKFYGGVPVEYRTIE--EEGWQPDIDDIRKKITEKTKAIA  171 (398)
T ss_pred             EEe-CCHHHHHHHHHHHhCCCCCEEEEcCCCCcchH--HHHHHcCCEEEEecccc--ccCCcCCHHHHHhhCCcceEEEE
Confidence            765 78999999999999999999998776655432  3455666 555552222  123346777776  678899999


Q ss_pred             EeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC---ccc---ccccc--EEEeCCCccccCCc--cEEEEE
Q 043610          214 ICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK---PVD---VTRFG--VIYAGAQKNVGPSG--VTIVIV  277 (430)
Q Consensus       214 i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~id---l~~~d--~~~~s~~K~~gp~G--~g~l~v  277 (430)
                      +++++||||..++  +   |.++ +++|+++++|++++....   ...   +...+  +++.|++|+++.+|  +||+++
T Consensus       172 l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~  251 (398)
T PRK08363        172 VINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYF  251 (398)
T ss_pred             EECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEE
Confidence            9999999999998  3   4443 578999999998763211   111   22222  56789999998667  899988


Q ss_pred             --cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCcee
Q 043610          278 --RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYK  355 (430)
Q Consensus       278 --~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~  355 (430)
                        ++++++.+......+       ..  ...+++.+.+.++..+|+...  ..+++..+++++.++++.+.|++..|+.+
T Consensus       252 ~~~~~~~~~l~~~~~~~-------~~--~~~~~s~~~q~~~~~~l~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~~~  320 (398)
T PRK08363        252 VDPEGKLAEVREAIDKL-------AR--IRLCPNTPAQFAAIAGLTGPM--DYLEEYMKKLKERRDYIYKRLNEIPGIST  320 (398)
T ss_pred             eCcHHHHHHHHHHHHHH-------hc--ccccCChHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence              556555432111000       00  012446666777777775311  24567788889999999999987446654


Q ss_pred             cCCCCCCCccceEEEEcCCC--chhHHHHHH-HHHcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          356 CPVEKSVRSFMNVPFTLEKS--DLEAEFVKE-AAKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       356 ~~~~~~~rs~~iv~f~~~~~--~~~~~~~~~-L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..  +  .....+.+.+++.  ..+.+++.. |.++||.+.+|...    .+++||+++.  +++++++.++.|++++++
T Consensus       321 ~~--p--~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~~~~  394 (398)
T PRK08363        321 TK--P--QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP--PVEILEEAMDRFEEFMRE  394 (398)
T ss_pred             cC--C--CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence            32  1  1222222355531  123356544 68889998876531    3589999964  689999999999988765


Q ss_pred             h
Q 043610          429 H  429 (430)
Q Consensus       429 ~  429 (430)
                      .
T Consensus       395 ~  395 (398)
T PRK08363        395 R  395 (398)
T ss_pred             h
Confidence            3

>PRK09265 aminotransferase AlaT; Validated

Probab=99.88  E-value=1.3e-20  Score=190.94  Aligned_cols=327  Identities=12%  Similarity=0.108  Sum_probs=205.1

Q ss_pred             CCCCceeecCC-C----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh------CCCCCcE
Q 043610           67 QEDRVFNFAAG-P----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL------NIPQEYS  135 (430)
Q Consensus        67 ~~~~~~l~~~g-p----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~------g~~~~~~  135 (430)
                      ..+.+++|+.| |    .+.++.+.+++.+.+.+.          ..++..  .-..++|+.+++++      +++++ +
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~----------~~Y~~~--~G~~~lr~~ia~~~~~~~~~~~~~~-~   97 (404)
T PRK09265         31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA----------QGYSDS--KGLFSARKAIMQYYQQKGIPDVDVD-D   97 (404)
T ss_pred             cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC----------CCCCCC--CCcHHHHHHHHHHHhccCCCCCCcc-c
Confidence            34467777775 3    347788988888765321          111111  01125667777776      67665 7


Q ss_pred             EEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEE
Q 043610          136 VLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYL  212 (430)
Q Consensus       136 vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv  212 (430)
                      |+++ +|+++++..++.+++++||+|++..+.+...  ...++..| ++..++...+  .+..+|+++++  +++++++|
T Consensus        98 i~~t-~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~v~~~~~~~--~~~~~d~~~l~~~~~~~~~~v  172 (404)
T PRK09265         98 IYIG-NGVSELIVMAMQALLNNGDEVLVPAPDYPLW--TAAVSLSGGKPVHYLCDEE--AGWFPDLDDIRSKITPRTKAI  172 (404)
T ss_pred             EEEe-CChHHHHHHHHHHhCCCCCEEEEeCCCCcCh--HHHHHHcCCEEEEEecccc--cCCCCCHHHHHHhccccceEE
Confidence            7765 7899999999999999999999877766543  23445566 6666655321  22247778886  67889999


Q ss_pred             EEeecCCCccccCC--CC---ccc-cCCCcEEEEeccCcC---CC-Cccccccc----c-EEEeCCCccccCCc--cEEE
Q 043610          213 HICANETIHGVEFK--EY---PSA-KNSTGILVADMSSNF---CS-KPVDVTRF----G-VIYAGAQKNVGPSG--VTIV  275 (430)
Q Consensus       213 ~i~~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~---G~-~~idl~~~----d-~~~~s~~K~~gp~G--~g~l  275 (430)
                      ++++++||||.+++  ++   .++ +++|+++++|+++..   .. ....+..+    . +++.|++|.+|.+|  +||+
T Consensus       173 ~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~  252 (404)
T PRK09265        173 VIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWM  252 (404)
T ss_pred             EEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEE
Confidence            99999999999999  44   443 588999999998642   11 11122111    2 45688999999889  7999


Q ss_pred             EEc--HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHcc
Q 043610          276 IVR--KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNE---VEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       276 ~v~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~---v~~~~~~l~~~l~~~l~~~  350 (430)
                      +++  +++.+.+...    +..   .  .....++|...+.++..+|+...   .++.   ..+++.+.++.+.+.|++.
T Consensus       253 v~~~~~~~~~~~~~~----~~~---~--~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~r~~~~~~L~~~  320 (404)
T PRK09265        253 VLSGPKKHAKGYIEG----LDM---L--ASMRLCANVPAQHAIQTALGGYQ---SINELILPGGRLYEQRDRAWELLNAI  320 (404)
T ss_pred             EEeCchHHHHHHHHH----HHH---H--hccccCCCcHHHHHHHHHhcCch---hHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            863  3322211000    000   0  01112456667777777774211   1222   2245667788888999864


Q ss_pred             CCceecCCCCCCCccceEEEEcCCCc----hhHH-HHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHH
Q 043610          351 NGFYKCPVEKSVRSFMNVPFTLEKSD----LEAE-FVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       351 ~G~~~~~~~~~~rs~~iv~f~~~~~~----~~~~-~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~  421 (430)
                      .|+.+.+  +  .....+.+.+++..    .+.+ +.+.|.++||.+.+|..    ..+++|+++.  .+++++++.++.
T Consensus       321 ~~~~~~~--p--~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~--~~~e~l~~~l~r  394 (404)
T PRK09265        321 PGVSCVK--P--KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL--PRVDDLEEAIGR  394 (404)
T ss_pred             CCCcccC--C--CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC--CCHHHHHHHHHH
Confidence            4665432  1  12223444555311    1333 55667889999888743    2458999995  478999999999


Q ss_pred             HHHHHHhh
Q 043610          422 MKDFQAKH  429 (430)
Q Consensus       422 L~~~~~~~  429 (430)
                      |+++++++
T Consensus       395 l~~~l~~~  402 (404)
T PRK09265        395 IGRFLSGY  402 (404)
T ss_pred             HHHHHHHh
Confidence            99988764

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.88  E-value=6.3e-21  Score=189.30  Aligned_cols=287  Identities=13%  Similarity=0.096  Sum_probs=190.2

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+++++.+++++|.+   +++++ +|||+|++.++..+ +++||+|++....+++..  ..++..| +++.++..+.  
T Consensus        19 ~~~~~~~~la~~~~~~---~~~~~-~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~~--   90 (352)
T cd00616          19 KVREFEKAFAEYLGVK---YAVAV-SSGTAALHLALRALGIGPGDEVIVPSFTFVATA--NAILLLGATPVFVDIDPD--   90 (352)
T ss_pred             HHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH--HHHHHcCCeEEEEecCCC--
Confidence            4568889999999974   56665 68999999999988 589999998777766542  3345567 8877776421  


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc--cccc-cEEEeCC--
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD--VTRF-GVIYAGA--  263 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id--l~~~-d~~~~s~--  263 (430)
                       ...+|+++++  +++++++|+++|   ++|...|  +|.++ +++|+++++|++|++|....+  +..+ |+.++|+  
T Consensus        91 -~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~  166 (352)
T cd00616          91 -TYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHP  166 (352)
T ss_pred             -cCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCC
Confidence             2246788887  678999999875   5899988  78876 689999999999999976432  2222 5677765  


Q ss_pred             Ccccc-CCccEEEEEc-HHHHhccCCCC-Cc----cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043610          264 QKNVG-PSGVTIVIVR-KDLLGNAQDKT-PL----MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN  336 (430)
Q Consensus       264 ~K~~g-p~G~g~l~v~-~~~~~~~~~~~-p~----~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~  336 (430)
                      +||++ +.| |+++.+ +++.+.+.... ..    ...+.. ...+...+.++..    +..++..+   .+++.+.++.
T Consensus       167 ~K~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----aa~~~~~l---~~~~~~~~~~  237 (352)
T cd00616         167 TKNLTTGEG-GAVVTNDEELAERARLLRNHGRDRDRFKYEH-EILGYNYRLSEIQ----AAIGLAQL---EKLDEIIARR  237 (352)
T ss_pred             CCCCcccCc-eEEEECCHHHHHHHHHHHHcCCCCCCCcccc-ceeeeccCcCHHH----HHHHHHHH---HhhHHHHHHH
Confidence            49995 555 666665 56666532210 00    000000 0000001111211    11122211   2568888999


Q ss_pred             HHHHHHHHHHHHccCCceecCCCCC-CCccceEEEEcCC--CchhHHHHHHHHHcCCeecCCC-----C-----------
Q 043610          337 RKKAELLYNVIDGSNGFYKCPVEKS-VRSFMNVPFTLEK--SDLEAEFVKEAAKEKMVQLKGH-----R-----------  397 (430)
Q Consensus       337 ~~l~~~l~~~l~~~~G~~~~~~~~~-~rs~~iv~f~~~~--~~~~~~~~~~L~~~Gi~~~~g~-----~-----------  397 (430)
                      +++.+++++.|.+..|++++...+. ..++.+++|.+++  .....++.+.|.++||.+....     .           
T Consensus       238 ~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~  317 (352)
T cd00616         238 REIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPP  317 (352)
T ss_pred             HHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCc
Confidence            9999999999997678887642221 2345678888863  1223379999999999642100     0           


Q ss_pred             ---------CCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          398 ---------SVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       398 ---------~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                               ..+.+|++++.++|++||++++++|+
T Consensus       318 ~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         318 GDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             CCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence                     01579999999999999999999874

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK09082 methionine aminotransferase; Validated

Probab=99.88  E-value=6.5e-21  Score=192.03  Aligned_cols=322  Identities=10%  Similarity=0.018  Sum_probs=216.2

Q ss_pred             CCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCC--CcEEEEEeCcHH
Q 043610           69 DRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQ--EYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~--~~~vv~~~~gaT  144 (430)
                      +.+++|+.|-.  +.++.+.+++.+.+.+.    ...|..   .....+..+.+.+.+.+++|.+.  +.++++ ++|++
T Consensus        30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~----~~~Y~~---~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~-t~G~~  101 (386)
T PRK09082         30 HGAINLSQGFPDFDGPPYLVEALAYAMAAG----HNQYPP---MTGVAALREAIAAKTARLYGRQYDADSEITV-TAGAT  101 (386)
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHHcC----CCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEE-eCCHH
Confidence            34677777542  34678888887766431    111111   12234455677788888888742  225665 57899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +++..++.+++.+||+|++..+.+.+.  ...++..| +++.++...   .+..+|+++++  +.+++++|++++++|||
T Consensus       102 ~al~~~~~~~~~~gd~Vli~~p~y~~~--~~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt  176 (386)
T PRK09082        102 EALFAAILALVRPGDEVIVFDPSYDSY--APAIELAGGRAVRVALQP---PDFRVDWQRFAAAISPRTRLIILNTPHNPS  176 (386)
T ss_pred             HHHHHHHHHHcCCCCEEEEeCCCchhh--HHHHHHcCCEEEEEecCc---ccccCCHHHHHHhcCccceEEEEeCCCCCC
Confidence            999999999999999999877765543  23445567 777777643   22347888886  67889999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcCCC---C-cc---cccc---ccEEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNFCS---K-PV---DVTR---FGVIYAGAQKNVGPSG--VTIVIVRKDLLG  283 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~-~i---dl~~---~d~~~~s~~K~~gp~G--~g~l~v~~~~~~  283 (430)
                      |..++  +   |.++ +++|+++++|+++....   . ..   .+..   ..+++.|++|.+|.+|  +|+++.++++++
T Consensus       177 G~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~  256 (386)
T PRK09082        177 GTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSA  256 (386)
T ss_pred             CcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHH
Confidence            99987  3   4443 68999999999875322   1 11   1222   1378899999999889  899999998877


Q ss_pred             ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      .+.....            ....+++.+.+.++...|+..  ...++.+++.++++++.+.+.|++ .|+++.+   + .
T Consensus       257 ~~~~~~~------------~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~---~-~  317 (386)
T PRK09082        257 EFRKVHQ------------YNTFTVNTPAQLALADYLRAE--PEHYLELPAFYQAKRDRFRAALAN-SRFKLLP---C-E  317 (386)
T ss_pred             HHHHHHh------------hhcCCCChHHHHHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHHh-CCCcccC---C-C
Confidence            6432100            011245666777776666521  123566788889999999999986 6776542   1 2


Q ss_pred             ccceEEEEcCC-Cch-hHHHHHHH-HHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          364 SFMNVPFTLEK-SDL-EAEFVKEA-AKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       364 s~~iv~f~~~~-~~~-~~~~~~~L-~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      +...+.+.+++ .+. +.+|.+.| +++||.+.+|..      ..+++||++..  +++++++.++.|++
T Consensus       318 g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~--~~~~l~~~~~rl~~  385 (386)
T PRK09082        318 GTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK--QEETLDAAAERLCQ  385 (386)
T ss_pred             eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence            33345556653 122 33788876 677999887642      13579999985  78889998888875

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.88  E-value=4.2e-20  Score=183.96  Aligned_cols=308  Identities=14%  Similarity=0.132  Sum_probs=209.1

Q ss_pred             CceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           70 RVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      +++.|+.|  |.++|+.+++++.+.+..          ...+. +. . ..++|+.++++++++++ +|++ ++|+++++
T Consensus        20 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~----------~~~Y~-~~-~-~~~lr~~ia~~~~~~~~-~i~i-t~Ga~~~l   84 (354)
T PRK06358         20 MILDFSANINPLGVPESLKQAITENLDK----------LVEYP-DP-D-YLELRKRIASFEQLDLE-NVIL-GNGATELI   84 (354)
T ss_pred             ceEEecCCCCCCCCCHHHHHHHHHHHHh----------hhcCC-Cc-c-HHHHHHHHHHHhCCChh-hEEE-CCCHHHHH
Confidence            35666665  345688999999886532          11221 11 2 45889999999999876 7776 47899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCccccC
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHGVEF  225 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~  225 (430)
                      ..++..+ .+ ++|++..+.+..+  ...++..| ++..++...+..+  .+|.+.++ +.+++++|++++++||||..+
T Consensus        85 ~~~~~~~-~~-~~v~i~~P~y~~~--~~~~~~~g~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~v~~~~P~NPtG~~~  158 (354)
T PRK06358         85 FNIVKVT-KP-KKVLILAPTFAEY--ERALKAFDAEIEYAELTEETNF--AANEIVLEEIKEEIDLVFLCNPNNPTGQLI  158 (354)
T ss_pred             HHHHHHh-CC-CcEEEecCChHHH--HHHHHHcCCeeEEEeCccccCC--CccHHHHHhhccCCCEEEEeCCCCCCCCcc
Confidence            9988875 44 5777666655433  23456677 8777776432122  35622234 566799999999999999999


Q ss_pred             C--C---Cccc-cCCCcEEEEeccCcCCC---Cccc----ccccc--EEEeCCCccccCCc--cEEEEEc-HHHHhccCC
Q 043610          226 K--E---YPSA-KNSTGILVADMSSNFCS---KPVD----VTRFG--VIYAGAQKNVGPSG--VTIVIVR-KDLLGNAQD  287 (430)
Q Consensus       226 p--e---i~~~-~~~g~~lvvD~a~s~G~---~~id----l~~~d--~~~~s~~K~~gp~G--~g~l~v~-~~~~~~~~~  287 (430)
                      +  +   |.++ +++++++++|+++.--.   .+..    ++..+  +++.|++|.+|.+|  +||++++ +.+++.+..
T Consensus       159 ~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~  238 (354)
T PRK06358        159 SKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQ  238 (354)
T ss_pred             CHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHH
Confidence            9  3   4343 57899999999874221   1111    22223  67899999999889  8999885 566655432


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..+              ..+.+...+.++..+|+.-   .-++...+++++.++.+++.|++..|+.+.+  +  .++ -
T Consensus       239 ~~~--------------~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~--~g~-f  296 (354)
T PRK06358        239 MRE--------------PWSINTFADLAGQTLLDDK---EYIKKTIQWIKEEKDFLYNGLSEFKGIKVYK--P--SVN-F  296 (354)
T ss_pred             hCC--------------CCcchHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC--C--cce-E
Confidence            111              1345666777777777531   1246677888888999999998754665542  1  232 3


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +.+.+++   ..++.++|.++||.+.+|...    .+++||+++   +.++.++|+++|++++
T Consensus       297 ~~~~~~~---~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~---~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        297 IFFKLEK---PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK---SREDNKKLLKALEVIL  353 (354)
T ss_pred             EEEEcCc---hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence            4466653   247999999999998876432    357999988   7999999999999875

>PRK07777 aminotransferase; Validated

Probab=99.88  E-value=1.6e-20  Score=189.18  Aligned_cols=327  Identities=13%  Similarity=0.087  Sum_probs=211.0

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT~  145 (430)
                      .+++++.|-  .+.|+.+.+++.+.+..    +...|..   .....+..+.+.+.+.+.+|.+  ++.+|++ ++|+++
T Consensus        25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~-t~G~~~   96 (387)
T PRK07777         25 GAVNLGQGFPDEDGPPEMLEAAQEAIAG----GVNQYPP---GPGIPELRAAIAAQRRRRYGLEYDPDTEVLV-TVGATE   96 (387)
T ss_pred             CeEEccCCCCCCCCCHHHHHHHHHHHhc----CCCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE-eCCcHH
Confidence            567777654  23355677776665532    1111111   1223344455566666667764  3225766 578999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      |+.+++.+++++||+|++..+.+.+..  ..++..| +++.++..++ +.+..+|+++++  +.+++++|++++++||||
T Consensus        97 al~~~~~~~~~~gd~vli~~p~y~~~~--~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG  173 (387)
T PRK07777         97 AIAAAVLGLVEPGDEVLLIEPYYDSYA--AVIAMAGAHRVPVPLVPD-GRGFALDLDALRAAVTPRTRALIVNSPHNPTG  173 (387)
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCchhhH--HHHHHCCCEEEEeecCCc-cCCCcCCHHHHHHhcCcccEEEEEcCCCCCCC
Confidence            999999999899999998776654432  3455567 7666766432 123357888886  677899999999999999


Q ss_pred             ccCC--C---Cccc-cCCCcEEEEeccCcCCC----C--ccc-cc---cccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          223 VEFK--E---YPSA-KNSTGILVADMSSNFCS----K--PVD-VT---RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       223 ~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~--~id-l~---~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      ..++  +   |.++ +++++++++|+++....    .  ++. +.   +.++++.|++|.+|.+|  +|+++.++++++.
T Consensus       174 ~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~  253 (387)
T PRK07777        174 TVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAA  253 (387)
T ss_pred             ccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHH
Confidence            9998  3   4443 58899999999875321    1  221 11   22488999999999779  7999999888765


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +..... +.           ..+.+.+.+.++..+++.-.  .-++.++++++++++.+++.|++ .|+++.+  +  .+
T Consensus       254 ~~~~~~-~~-----------~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~--~g  314 (387)
T PRK07777        254 VRAAKQ-YL-----------TYVGGAPFQPAVAHALDHED--AWVAALRDSLQAKRDRLAAGLAE-AGFEVHD--S--AG  314 (387)
T ss_pred             HHHHHh-hc-----------ccCCCCHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHHHHHh-CCCCccC--C--Cc
Confidence            432110 00           11223344555555554211  13567788899999999999987 5776543  1  12


Q ss_pred             cceEEEEcCC-Cc-hhHHHHHHHH-HcCCeecCCCCC-------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          365 FMNVPFTLEK-SD-LEAEFVKEAA-KEKMVQLKGHRS-------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       365 ~~iv~f~~~~-~~-~~~~~~~~L~-~~Gi~~~~g~~~-------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...+.+.+++ .. .+.+|++.|. ++||.+.+|...       .+++||+++.  +++++++.++.|+++..|
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~~~  386 (387)
T PRK07777        315 TYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRALRGR  386 (387)
T ss_pred             ceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHHhcC
Confidence            2334345442 11 2347999985 679998876421       3479999974  789999999999987655

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.88  E-value=1.9e-20  Score=189.65  Aligned_cols=325  Identities=13%  Similarity=0.098  Sum_probs=211.5

Q ss_pred             CCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-----CCCCcEEE
Q 043610           69 DRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-----IPQEYSVL  137 (430)
Q Consensus        69 ~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-----~~~~~~vv  137 (430)
                      +++++++.|.      .++++.+++++.+.+.+..-.+.+   .   ...    ..++|+.++++++     ++++ +|+
T Consensus        31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~---~---~~g----~~~lr~aia~~~~~~~~~~~~~-~i~   99 (401)
T TIGR01264        31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYA---P---TVG----ALSAREAIASYYHNPDGPIEAD-DVV   99 (401)
T ss_pred             CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCC---C---CCC----CHHHHHHHHHHHhhcCCCCCHH-HEE
Confidence            4667777653      467889999988876531101110   0   011    1255667777776     4554 666


Q ss_pred             EEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEE
Q 043610          138 FLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHI  214 (430)
Q Consensus       138 ~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i  214 (430)
                      + ++|+++++..++..++++||+|++..+.+..+  ...++..| ++..++...+.++  .+|+++++  +++++++|++
T Consensus       100 ~-t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~--~~~~~~~g~~v~~~~~~~~~~~--~~d~~~l~~~~~~~~~~v~~  174 (401)
T TIGR01264       100 L-CSGCSHAIEMCIAALANAGQNILVPRPGFPLY--ETLAESMGIEVKLYNLLPDKSW--EIDLKQLESLIDEKTAALIV  174 (401)
T ss_pred             E-CcChHHHHHHHHHHhCCCCCEEEEeCCCChhH--HHHHHHcCCEEEEeecCCccCC--CCCHHHHHHHhccCceEEEE
Confidence            6 58899999999999999999999877665433  24566778 7777765432123  47888886  5678999999


Q ss_pred             eecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC---CCC-ccccccc----c-EEEeCCCccccCCc--cEEEEE
Q 043610          215 CANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF---CSK-PVDVTRF----G-VIYAGAQKNVGPSG--VTIVIV  277 (430)
Q Consensus       215 ~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~---G~~-~idl~~~----d-~~~~s~~K~~gp~G--~g~l~v  277 (430)
                      ++++||||..++  +   |.++ +++|+++++|+++.-   ... ...+..+    . +++.|++|.++.+|  +||+++
T Consensus       175 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~  254 (401)
T TIGR01264       175 NNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIII  254 (401)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEe
Confidence            999999999998  3   4443 578999999998752   211 1122122    2 67899999999888  899988


Q ss_pred             cH------HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          278 RK------DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       278 ~~------~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      ++      +.++.+..       .      ......++...+.++..+|+... +..++..++++++.++++.+.|++..
T Consensus       255 ~~~~~~~~~~~~~~~~-------~------~~~~~~~~~~~q~a~~~~l~~~~-~~~l~~~~~~~~~~r~~l~~~L~~~~  320 (401)
T TIGR01264       255 HDRRGILRDIRDGLVK-------L------SQRILGPCTIVQGALPSILLRTP-QEYFDGTLSVLESNAMLCYGALAAVP  320 (401)
T ss_pred             cCcchhHHHHHHHHHH-------H------hhccCCCCcHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            63      22222110       0      00112345667777777775311 12467778888888999999998743


Q ss_pred             CceecCCCCCCCccceEEEEcCC-----CchhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEK-----SDLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~-----~~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      |+....  + ..+ .-+.+.++.     ...+.+++++| +++||.+.+|..  ..+++||+++.  ++++++..++.|.
T Consensus       321 ~~~~~~--p-~~g-~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~rl~  394 (401)
T TIGR01264       321 GLRPVM--P-SGA-MYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV--PVVMMEEACSRIQ  394 (401)
T ss_pred             CCcccC--C-Cee-eEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC--CHHHHHHHHHHHH
Confidence            654321  1 112 223344432     11234688877 478999888653  35789999985  6889999999999


Q ss_pred             HHHHhh
Q 043610          424 DFQAKH  429 (430)
Q Consensus       424 ~~~~~~  429 (430)
                      ++++++
T Consensus       395 ~~~~~~  400 (401)
T TIGR01264       395 EFCERH  400 (401)
T ss_pred             HHHhcc
Confidence            988775

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PLN02656 tyrosine transaminase

Probab=99.88  E-value=2.6e-20  Score=189.02  Aligned_cols=328  Identities=14%  Similarity=0.116  Sum_probs=213.7

Q ss_pred             CCCCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C--CCCCc
Q 043610           67 QEDRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N--IPQEY  134 (430)
Q Consensus        67 ~~~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g--~~~~~  134 (430)
                      .++.+++++.|-      .++|+.+++++.+.+.+....+.+   .   .....    ++|+.+++++    |  ++++ 
T Consensus        29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~---~---~~G~~----~lr~~ia~~~~~~~g~~~~~~-   97 (409)
T PLN02656         29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYA---P---TVGLP----QARRAIAEYLSRDLPYKLSLD-   97 (409)
T ss_pred             cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCC---C---CCCCH----HHHHHHHHHHHHhcCCCCCcc-
Confidence            356788888654      266889999988877531111111   0   11122    4445555554    3  3454 


Q ss_pred             EEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccE
Q 043610          135 SVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKY  211 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~l  211 (430)
                      +|+++ +|+++++..++..++++||+|++..+.+..+.  ..++..| ++..++...+  .+..+|+++++  +++++++
T Consensus        98 ~i~~t-~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~i~~~~~--~~~~~d~~~l~~~~~~~~~~  172 (409)
T PLN02656         98 DVFIT-SGCTQAIDVALSMLARPGANILLPRPGFPIYE--LCAAFRHLEVRYVDLLPE--KGWEVDLDAVEALADQNTVA  172 (409)
T ss_pred             cEEEe-CChHHHHHHHHHHHhCCCCeEEEeCCCCCcHH--HHHHHcCCEEEEEeCCCc--CCCCCCHHHHHHHhccCceE
Confidence            67664 78999999999998899999998877665432  2344467 8888877432  23347888887  6788999


Q ss_pred             EEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC---CCCc-ccc---cccc--EEEeCCCccccCCc--cEE
Q 043610          212 LHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF---CSKP-VDV---TRFG--VIYAGAQKNVGPSG--VTI  274 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~---G~~~-idl---~~~d--~~~~s~~K~~gp~G--~g~  274 (430)
                      |++++++||||.+++  +   |.++ +++|+++++|+++..   ...+ ..+   +..+  +++.|++|.++.+|  +||
T Consensus       173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~  252 (409)
T PLN02656        173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGW  252 (409)
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEE
Confidence            999999999999998  3   4443 588999999998752   2111 222   2222  67899999998888  899


Q ss_pred             EEEc--------HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          275 VIVR--------KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       275 l~v~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                      +++.        +++++.+...    .         ...+.++...+.++..+|+... ...++..++++++.++.+.+.
T Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~----~---------~~~~~~s~~~q~a~~~~l~~~~-~~~~~~~~~~~~~~r~~~~~~  318 (409)
T PLN02656        253 FVTTDPSGSFRDPKIVERIKKY----F---------DILGGPATFIQAAVPTILEQTD-ESFFKKTINILKQSSDICCDR  318 (409)
T ss_pred             EEEeCcccccccHHHHHHHHHH----H---------hhhcCCCHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            9884        4555543210    0         0113456778888888886311 124677888888999999999


Q ss_pred             HHccCCceecCCCCCCCccceEEEEcCCC---c--hhHHHH-HHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHH
Q 043610          347 IDGSNGFYKCPVEKSVRSFMNVPFTLEKS---D--LEAEFV-KEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       347 l~~~~G~~~~~~~~~~rs~~iv~f~~~~~---~--~~~~~~-~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~l  418 (430)
                      |++..++... ..+  .....+.+.++..   +  .+.+++ +.|.++||.+.+|..  ..+++||+++.  +++++++.
T Consensus       319 L~~~~~~~~~-~~p--~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~--~~e~l~ea  393 (409)
T PLN02656        319 IKEIPCITCP-HKP--EGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA--DPSSLEEA  393 (409)
T ss_pred             HhhCCCCcCC-cCC--CeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC--CHHHHHHH
Confidence            9863333211 111  1223344455411   1  122454 566788999988753  35689999995  78999999


Q ss_pred             HHHHHHHHHhh
Q 043610          419 VAFMKDFQAKH  429 (430)
Q Consensus       419 l~~L~~~~~~~  429 (430)
                      ++.|++++.++
T Consensus       394 l~rl~~~~~~~  404 (409)
T PLN02656        394 LGRIKSFYLRH  404 (409)
T ss_pred             HHHHHHHHHHh
Confidence            99999988764

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.87  E-value=2.5e-20  Score=186.23  Aligned_cols=279  Identities=15%  Similarity=0.153  Sum_probs=189.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT  195 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g  195 (430)
                      .++|+.+++++|++++ +|+++ +|+++++..++..++.+| |.|++..+ .|+.. ...++..| +++.++...+ +.+
T Consensus        62 ~~lr~~ia~~~~~~~~-~I~~t-~G~~~~l~~~~~~~~~~g~~~vlv~~p-~y~~~-~~~~~~~g~~~~~v~~~~~-~~~  136 (364)
T PRK04781         62 PGLRSALAALYGCAPE-QLLIG-RGSDEAIDLLVRALCVPGRDAVLVTPP-VFGMY-AVCARLQNAPLVEVPLVDG-ADG  136 (364)
T ss_pred             HHHHHHHHHHhCcChH-HEEEe-CCHHHHHHHHHHHhcCCCCCeEEEcCC-ChHHH-HHHHHHcCCEEEEEecCCC-ccC
Confidence            5888999999999876 77765 789999999999988888 56665544 45432 23345667 8777776321 123


Q ss_pred             CCCCccccc---cCCCccEEEEeecCCCccccCC--CCccc---cCCCcEEEEeccCc-CCCCc--cc-ccccc--EEEe
Q 043610          196 KIPNFDALE---QNPDAKYLHICANETIHGVEFK--EYPSA---KNSTGILVADMSSN-FCSKP--VD-VTRFG--VIYA  261 (430)
Q Consensus       196 ~~~d~~~l~---i~~~~~lv~i~~~~t~tG~~~p--ei~~~---~~~g~~lvvD~a~s-~G~~~--id-l~~~d--~~~~  261 (430)
                      ..+|++++.   .++++++|++++++||||.+++  ++.++   .++++++++|+++. +...+  +. ++..+  +++.
T Consensus       137 ~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~  216 (364)
T PRK04781        137 FHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLR  216 (364)
T ss_pred             CCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEe
Confidence            345667653   4678999999999999999999  45553   24578999999875 32211  11 12233  7889


Q ss_pred             CCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610          262 GAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK  339 (430)
Q Consensus       262 s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l  339 (430)
                      |++|.+|.+|  +||++.++++++.+.....              ..+.+...+.++..+|+.-. ..-.....+++++.
T Consensus       217 SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~--------------~~~~~~~~~~~a~~~l~~~~-~~~~~~~~~~~~~~  281 (364)
T PRK04781        217 TLSKAHALAAARIGSLIANAELIAVLRRCQA--------------PYPVPTPCAALAEQALSAPA-LAVTARRVAEVRAE  281 (364)
T ss_pred             cChhhcccccceeeeeeCCHHHHHHHHhccC--------------CCCCCHHHHHHHHHHHhccc-HHHHHHHHHHHHHH
Confidence            9999999889  8999999999877543211              12334455555555554210 00123444567778


Q ss_pred             HHHHHHHHHccCCce-ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC---CCCeeEEeecCCCCHHHH
Q 043610          340 AELLYNVIDGSNGFY-KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR---SVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       340 ~~~l~~~l~~~~G~~-~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~---~~g~iRis~~~~~t~edv  415 (430)
                      ++.+.+.|++..|+. +.+   + .+. -+.+.+++   ..++.+.|.++||.+.++..   ..+++||+++   +.+++
T Consensus       282 r~~l~~~L~~~~~~~~~~p---~-~g~-f~~~~~~~---~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~---~~~~~  350 (364)
T PRK04781        282 RERLHAALAQLPGVRRVYP---S-QGN-FLLVRFDD---AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG---TPEQN  350 (364)
T ss_pred             HHHHHHHHHhCCCCCeECC---C-CCc-EEEEEcCC---HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC---CHHHH
Confidence            889999998744653 322   1 232 23455552   23688889999999877532   2458999998   69999


Q ss_pred             HHHHHHHHHHHH
Q 043610          416 EKLVAFMKDFQA  427 (430)
Q Consensus       416 ~~ll~~L~~~~~  427 (430)
                      ++++++|+++.+
T Consensus       351 ~~l~~al~~~~~  362 (364)
T PRK04781        351 DRVLAALQRTQA  362 (364)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998754

>PLN02271 serine hydroxymethyltransferase

Probab=99.87  E-value=1.5e-20  Score=190.78  Aligned_cols=346  Identities=15%  Similarity=0.097  Sum_probs=228.5

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHH-HHHHHHHHHHHHhCCCCC-c--EEEEEeCcHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKS-IIEKAESDLRALLNIPQE-Y--SVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~r~~la~l~g~~~~-~--~vv~~~~gaT  144 (430)
                      .+.+++.++.-.+++.|++++...+.+-...|... ...+.+-++.+ +..-+.+..+++||++.+ +  +|-.  -|++
T Consensus       148 ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG-~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp--~SGs  224 (586)
T PLN02271        148 FKGIELIASENFVCRAVMEALGSHLTNKYSEGMPG-ARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQP--YSCT  224 (586)
T ss_pred             hcCeeeccccccCCHHHHHHhcCcccccCCCCCCC-CcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceee--ccHH
Confidence            56788888888899999999988887644444321 12233444444 444557788889998741 1  3433  4789


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHH-------HHHHHhC-CceEEecCCCCcCCCCCCccccc---cCCCccEEE
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAF-------KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLH  213 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~-------~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~  213 (430)
                      .|+.+++.++++|||+|+.++..+-|+-..       ..+...| ....++..-+.+.| .+|.++++   ..+++|+|+
T Consensus       225 ~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g-~IDyd~lek~a~~~rPKLII  303 (586)
T PLN02271        225 SANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTG-YIDYDKLEEKALDFRPKILI  303 (586)
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccC-ccCHHHHHHHhhhcCCeEEE
Confidence            999999999999999999876543333211       1122335 44444432211234 57888887   478999999


Q ss_pred             EeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc-----cccccEEEeCCCccc-cCCccEEEEEcHHHHhc
Q 043610          214 ICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD-----VTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGN  284 (430)
Q Consensus       214 i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-----l~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~  284 (430)
                      +.+..++  ..+|  +|+++ +++|+++++|++|..|.+..+     +...|++++++|||+ ||.| |+++++++....
T Consensus       304 ~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~~  380 (586)
T PLN02271        304 CGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPKLR  380 (586)
T ss_pred             ECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEEEeccccccc
Confidence            9887666  6677  67776 689999999999999988544     345699999999999 8999 988888764332


Q ss_pred             cCCCCC------ccccccchhh----cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCce
Q 043610          285 AQDKTP------LMLDYKIHDE----NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY  354 (430)
Q Consensus       285 ~~~~~p------~~~~~~~~~~----~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~  354 (430)
                      .++..-      ...++...++    .+...|+.+.. ++++..+|++.... .+.+-.+...+.++.|.+.|.+ .|+.
T Consensus       381 ~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~-IAalAvalkea~~~-efk~Ya~QVv~NAkaLA~~L~~-~G~~  457 (586)
T PLN02271        381 KQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNH-IAALAIALKQVATP-EYKAYMQQVKKNAQALASALLR-RKCR  457 (586)
T ss_pred             ccCCccccccccccHHHHHHhhcccCCccccChhHHH-HHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHH-CCCe
Confidence            221100      0001111011    12223455554 88999999877633 4567777888888899999986 7999


Q ss_pred             ecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeec----CCCC---CCCeeEEeecCC----CCHHHHHHHHHHH
Q 043610          355 KCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL----KGHR---SVGGMRASIYNA----MPLAGVEKLVAFM  422 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~----~g~~---~~g~iRis~~~~----~t~edv~~ll~~L  422 (430)
                      ++. .. .. ++.+.+.+.+.+.+. ..-+.|.+.||.+-    ++..   ..++|||+...-    ..++|++.+.++|
T Consensus       458 vv~-gg-Td-nHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i  534 (586)
T PLN02271        458 LVT-GG-TD-NHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFL  534 (586)
T ss_pred             Eee-CC-CC-cceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHH
Confidence            874 21 12 245666775444445 45566888899853    3332   245799996543    3579999998888


Q ss_pred             HHHHH
Q 043610          423 KDFQA  427 (430)
Q Consensus       423 ~~~~~  427 (430)
                      .+.++
T Consensus       535 ~~~~~  539 (586)
T PLN02271        535 LRAAQ  539 (586)
T ss_pred             HHHHh
Confidence            88764

>PLN02721 threonine aldolase

Probab=99.87  E-value=1.3e-20  Score=187.08  Aligned_cols=312  Identities=13%  Similarity=0.122  Sum_probs=196.3

Q ss_pred             ceeecCCC-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           71 VFNFAAGP-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        71 ~~l~~~gp-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      +++|+.+. ..+++.+++++.+...     +.+   ...+++.    ..++++.+++++|.+.   ++++ ++||+++..
T Consensus         7 ~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~---~~~~~~~----~~~l~~~la~~~~~~~---~~~~-~~Gs~a~~~   70 (353)
T PLN02721          7 VVDLRSDTVTKPTDAMRAAMANAEV-----DDD---VLGYDPT----ALRLEEEMAKIFGKEA---ALFV-PSGTMGNLI   70 (353)
T ss_pred             hhhhhcccccCCCHHHHHHHHhccC-----CCc---ccCCCHH----HHHHHHHHHHHhCCce---eEEe-cCccHHHHH
Confidence            44454443 2356677777754311     111   1122222    4688999999999863   4555 456777777


Q ss_pred             HHhhcCC-CCCcEEEEeCChhHHHH-HHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-------CCccEEEEeec
Q 043610          150 VPLNLCT-PNDPVDYIVTGSWGDKA-FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-------PDAKYLHICAN  217 (430)
Q Consensus       150 ~~~sl~~-~gd~vl~~~~g~~~~~~-~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-------~~~~lv~i~~~  217 (430)
                      ++..++. +||+|++.++.|++..- ...++..| +++.++..+   .+ .+|+++++  ++       +++++|+++++
T Consensus        71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~  146 (353)
T PLN02721         71 SVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNE---DG-TMDLDAIEAAIRPKGDDHFPTTRLICLENT  146 (353)
T ss_pred             HHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCc---CC-CcCHHHHHHHHHhccCCCCCcceEEEEecc
Confidence            7777776 99999987776653210 01345567 777776532   22 46888887  55       68999999885


Q ss_pred             -CCCccccCC-----CCccc-cCCCcEEEEeccCcCCC-----Cccc--cccccEEEeCCCcccc-CCccEEEEEcHHHH
Q 043610          218 -ETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS-----KPVD--VTRFGVIYAGAQKNVG-PSGVTIVIVRKDLL  282 (430)
Q Consensus       218 -~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~-----~~id--l~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~  282 (430)
                       ++++|..+|     +|.++ +++|+++++|+++.++.     .+.+  +...|.++.++|||++ |.| ++++.+++++
T Consensus       147 ~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~~  225 (353)
T PLN02721        147 HANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVG-SVIVGSKSFI  225 (353)
T ss_pred             ccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCcee-eEEecCHHHH
Confidence             667899888     34444 58899999999987664     1222  2244778889999996 544 4677788887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHH--HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCcee-cCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMC--GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYK-CPVE  359 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~--~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~-~~~~  359 (430)
                      +......    .        ...++++..+..++  ..+++..     .+. .++..++++++++.|.+..|+.+ +. .
T Consensus       226 ~~~~~~~----~--------~~~~~~~~~~~~~~~~~~~l~~~-----~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~-~  286 (353)
T PLN02721        226 RKAKRLR----K--------TLGGGMRQVGVLAAAALVALQEN-----VPK-LEDDHKKAKLLAEGLNQIKGLRVNVA-A  286 (353)
T ss_pred             HhHHHHH----H--------hcCCCeehhHHHHHHHHHHHHHH-----HHH-HHHHHHHHHHHHHHHHhCCCcEEecC-C
Confidence            6532100    0        01122222222221  1233221     222 33345677899999987557654 22 1


Q ss_pred             CCCCccceEEEEcCCC--chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKS--DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~--~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +  .+ ..+.+.+++.  ....++.++|.++||.+.++.  .+++|++++.+++++|+++++++|++++.
T Consensus       287 ~--~~-~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~--~~~lR~~~~~~~~~~~i~~~~~~l~~~~~  351 (353)
T PLN02721        287 V--ET-NIVYFDITDGSRITAEKLCKSLEEHGVLLMPGN--SSRIRVVTHHQISDSDVQYTLSCFQQAAL  351 (353)
T ss_pred             c--cc-eEEEEEccCCccccHHHHHHHHHhCCcEEecCC--CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence            1  23 3466777641  123379999999999988753  45899999989999999999999998764

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.87  E-value=1.4e-20  Score=204.56  Aligned_cols=304  Identities=13%  Similarity=0.062  Sum_probs=204.7

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH----HHHHHHHhhcCCC-CC----cEEEEeCChhHHHHHHHHHHhC
Q 043610          111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT----TQFAAVPLNLCTP-ND----PVDYIVTGSWGDKAFKEAQKFC  181 (430)
Q Consensus       111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT----~a~~~~~~sl~~~-gd----~vl~~~~g~~~~~~~~~a~~~g  181 (430)
                      +.+.+++.++|+.|++++|++   +|.|. .++|    ++++.++..+.++ ||    +|++....|.+...  -+...|
T Consensus       564 ~g~~~~~~~~r~~la~i~g~~---~v~f~-pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a--~a~~~G  637 (993)
T PLN02414        564 QGYQEMFEDLGDLLCEITGFD---SFSLQ-PNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA--SAAMCG  637 (993)
T ss_pred             HHHHHHHHHHHHHHHHHhCCC---eEEEc-CCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH--HHHHCC
Confidence            346789999999999999993   67775 6777    7889999998755 77    66665544444321  123367


Q ss_pred             -CceEEecCCCCcCCCCCCccccc--cC---CCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC-Ccc
Q 043610          182 -NPQVIWSGKAEKYTKIPNFDALE--QN---PDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS-KPV  251 (430)
Q Consensus       182 -~~~~v~~~~~~~~g~~~d~~~l~--i~---~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~-~~i  251 (430)
                       ++++++.++   .| .+|+++|+  ++   +++++|+++|++|.+|...|  +|+++ +++|+++++|++|..+. ..+
T Consensus       638 ~~vv~v~~d~---~G-~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~  713 (993)
T PLN02414        638 MKIVVVGTDA---KG-NINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLT  713 (993)
T ss_pred             CEEEEeccCC---CC-CcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcC
Confidence             888888743   45 57999987  66   47899999999999999998  89996 79999999999998887 344


Q ss_pred             ccccc--cEEEeCCCccc-cCCc-----cEEEEEcHHHHhccCCCCCccc-cccchhhcCCCCCCccHHHH---HHHHHH
Q 043610          252 DVTRF--GVIYAGAQKNV-GPSG-----VTIVIVRKDLLGNAQDKTPLML-DYKIHDENNSLYNTPPCYCI---YMCGLV  319 (430)
Q Consensus       252 dl~~~--d~~~~s~~K~~-gp~G-----~g~l~v~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~T~~~~~~---~a~~~a  319 (430)
                      +..++  ||++++.|||+ +|.|     +|++++++++...+....-..- ++.. .+..+..||.+...+   ..+..+
T Consensus       714 ~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~-r~~~s~iGt~~~a~~g~al~l~~A  792 (993)
T PLN02414        714 SPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPR-PEKTQPLGTISAAPWGSALILPIS  792 (993)
T ss_pred             CccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCccc-ccCCCCcCCccchhhhhHHHHHHH
Confidence            55555  79999999988 4765     9999999977544321100000 0000 001122356444222   455555


Q ss_pred             HHHHHHh--cCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC---C-Cchh-HHHHHHHHHcCCee
Q 043610          320 FEYLLEL--GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE---K-SDLE-AEFVKEAAKEKMVQ  392 (430)
Q Consensus       320 l~~l~~~--~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~---~-~~~~-~~~~~~L~~~Gi~~  392 (430)
                      +.++...  .|+.++.++...++++++++|.+.  +.+....+..+...-+.+.+.   + .+.+ .++.++|.+.||..
T Consensus       793 ~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~--~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Giha  870 (993)
T PLN02414        793 YTYIAMMGSEGLTDASKIAILNANYMAKRLEGH--YPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHA  870 (993)
T ss_pred             HHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh--CCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEE
Confidence            5555431  256666999999999999999863  433321111111111222332   1 1223 37999999989874


Q ss_pred             cC-CCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          393 LK-GHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       393 ~~-g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .. .....+.+||++.-+++++|+|+|+++|+.+.+
T Consensus       871 pt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~  906 (993)
T PLN02414        871 PTMSWPVPGTLMIEPTESESKAELDRFCDALISIRE  906 (993)
T ss_pred             eeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHH
Confidence            21 122256799999999999999999999988764

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.87  E-value=5.9e-20  Score=183.13  Aligned_cols=308  Identities=12%  Similarity=0.063  Sum_probs=207.0

Q ss_pred             CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.++.|+.|  |.++|+.+++++.+.+...          .++...   -..++|+.++++++.+++ +|++ +.|++++
T Consensus        30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~Y~~~---~~~~lr~~ia~~~~~~~~-~I~i-t~G~~~a   94 (357)
T PRK14809         30 DDLVKLSSNENPHGPSPAAVEAIREAAERV----------HSYPKA---SHADLTAALADRWDVSPE-QVWL-ANGGDGA   94 (357)
T ss_pred             cceeEecCCCCCCCCCHHHHHHHHHHHhhh----------hcCCCC---CHHHHHHHHHHHhCCCcc-eEEE-CCCHHHH
Confidence            457777764  4567888999988765421          111110   134788899999999876 7776 5789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCcccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~  224 (430)
                      +..++.++++|||+|++.++++..+.  ..++..| .++.++...+  .+..++.+++. ..+++++|++++++||||..
T Consensus        95 l~~~~~~~~~~gd~V~v~~P~y~~~~--~~~~~~g~~~~~~~l~~~--~~~~~~~~~~~~~~~~~k~i~l~~p~NPTG~~  170 (357)
T PRK14809         95 LDYLARAMLDPGDTVLVPDPGFAYYG--MSARYHHGEVREYPVSKA--DDFEQTADTVLDAYDGERIVYLTSPHNPTGSE  170 (357)
T ss_pred             HHHHHHHhcCCCCEEEEeCCChHHHH--HHHHHcCCeEEEEecccC--cCCCcCHHHHHHhhcCCcEEEEeCCCCCCCcC
Confidence            99999999999999988776644332  2344556 7777776432  22234555554 22568999999999999999


Q ss_pred             CC--CCccc---cCCCcEEEEeccCcCCCC-c--cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCc
Q 043610          225 FK--EYPSA---KNSTGILVADMSSNFCSK-P--VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPL  291 (430)
Q Consensus       225 ~p--ei~~~---~~~g~~lvvD~a~s~G~~-~--id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~  291 (430)
                      ++  ++.++   .++++++++|+++..-.. +  +. +...+  +++.|++|.+|.+|  +|+++.++++++.+....  
T Consensus       171 ~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~--  248 (357)
T PRK14809        171 IPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVN--  248 (357)
T ss_pred             CCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhC--
Confidence            99  44443   345789999998753221 1  11 12223  67899999999889  899999998887653211  


Q ss_pred             cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                                  .....+...+.++..+|+.   ..-+++..+.+++.++.+.+.|.+ .+   .+    ..+ ..+.+.
T Consensus       249 ------------~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~-~~---~~----~~g-~f~~~~  304 (357)
T PRK14809        249 ------------TPFAASELACRAGLAALDD---DEHVERTVETARWAREYIREELDA-PT---WE----SAG-NFVLAE  304 (357)
T ss_pred             ------------CCCCCCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhcC-cc---CC----CCC-CEEEEE
Confidence                        1123455566666666642   123566677777788888888764 22   11    122 234455


Q ss_pred             cCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          372 LEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +++   ..+|.+.|.++||.+.+|..  ..+++|||++   +.++++++++.|+++++
T Consensus       305 ~~~---~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        305 VGD---ASAVAEAAQERGVIVRDCTSFGLPECIRITCG---TREETERAVEVLNEVLA  356 (357)
T ss_pred             CCC---HHHHHHHHHHCCEEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence            542   34788889899999887653  2468999976   57899999999998874

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.87  E-value=5.3e-20  Score=190.48  Aligned_cols=330  Identities=13%  Similarity=0.126  Sum_probs=209.2

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~  145 (430)
                      .+..+++++++...|..+++++.+.+.... .+...|..   .....++.+.+.+.+.+..|.  +++ +|++ ++|+++
T Consensus        76 ~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~-~~~~~Y~~---~~G~~~LR~aia~~~~~~~g~~~~~~-~I~i-t~Ga~~  149 (481)
T PTZ00377         76 YPFLLEDPSVSSLFPADVVARAKEYLNAIG-GGTGAYTD---SAGYPFVRKAVAAFIERRDGVPKDPS-DIFL-TDGASS  149 (481)
T ss_pred             ChhhhcCccccccCCHHHHHHHHHHHHhCC-CcccCcCc---ccCCHHHHHHHHHHHHHhcCCCCChh-hEEE-cCCHHH
Confidence            456677777888889999999877654321 11111111   112232333333444333343  454 6766 589999


Q ss_pred             HHHHHHhhcC-CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEe
Q 043610          146 QFAAVPLNLC-TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHIC  215 (430)
Q Consensus       146 a~~~~~~sl~-~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~  215 (430)
                      ++..++..++ +|||+|++..+.+.++.  ..++..| +++.++..+++.|  .+|+++++  +++      ++|+|+++
T Consensus       150 al~~~~~~l~~~~gD~Vlv~~P~y~~y~--~~~~~~g~~~v~v~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~k~l~l~  225 (481)
T PTZ00377        150 GIKLLLQLLIGDPSDGVMIPIPQYPLYS--AAITLLGGKQVPYYLDEEKGW--SLDQEELEEAYEQAVRNGITPRALVVI  225 (481)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCchhHH--HHHHHcCCEEEEEEeccccCC--CCCHHHHHHHHHHHHhcCCCeeEEEEE
Confidence            9999999998 79999998777766542  3455667 8877877543233  47888886  443      79999999


Q ss_pred             ecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC----CCCc-c-------ccccc-----c-EEEeCCCccc-cCC
Q 043610          216 ANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF----CSKP-V-------DVTRF-----G-VIYAGAQKNV-GPS  270 (430)
Q Consensus       216 ~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~----G~~~-i-------dl~~~-----d-~~~~s~~K~~-gp~  270 (430)
                      +++||||.+++  +   |.++ +++|+++++|+++.-    +..+ .       ++..-     . +++.|++|.+ |++
T Consensus       226 ~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~  305 (481)
T PTZ00377        226 NPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGEC  305 (481)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCC
Confidence            99999999999  3   4443 588999999998752    1111 1       12211     1 5678999975 888


Q ss_pred             c--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH----------HHHhcCHHHHHHH
Q 043610          271 G--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY----------LLELGGLNEVEKM  335 (430)
Q Consensus       271 G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~----------l~~~~g~~~v~~~  335 (430)
                      |  +||+++   ++++++.+....           .  ...+++...+.++..+|+.          ..+  .+..+.++
T Consensus       306 GlRiG~~~~~~~p~~li~~l~~~~-----------~--~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~--~~~~~~~~  370 (481)
T PTZ00377        306 GRRGGYFELTNIPPEVREQIYKLA-----------S--INLCSNVVGQLMTGLMCNPPREGDASYPLYKR--ERDAIFTS  370 (481)
T ss_pred             cCceEEEEEeCCCHHHHHHHHHHh-----------h--eecCCChHHHHHHHHHhCCCCCCcccHHHHHH--HHHHHHHH
Confidence            9  899886   777777643211           0  1124566788888877741          111  13444456


Q ss_pred             HHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc--CCC----------chhHHHH-HHHHHcCCeecCCCCC----
Q 043610          336 NRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL--EKS----------DLEAEFV-KEAAKEKMVQLKGHRS----  398 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~--~~~----------~~~~~~~-~~L~~~Gi~~~~g~~~----  398 (430)
                      +++.++.+.+.|.+..|+.+..  +  ....-+.+.+  +..          ..+.+++ ..|.++||.+.+|...    
T Consensus       371 ~~~rr~~l~~~L~~~~g~~~~~--p--~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~  446 (481)
T PTZ00377        371 LKRRAELLTDELNKIEGVSCQP--V--EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKP  446 (481)
T ss_pred             HHHHHHHHHHHHhcCCCcEeec--C--CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCC
Confidence            7888899999998755776653  1  1212222223  210          0122344 4457789999887532    


Q ss_pred             -CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          399 -VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       399 -~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       .+++|+|+.  .+++++++.++.|++++++
T Consensus       447 ~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~  475 (481)
T PTZ00377        447 GTYHFRITIL--PPEEQIEEMVKKIKEFHES  475 (481)
T ss_pred             CCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence             247999997  5778888888888887764

>PRK07683 aminotransferase A; Validated

Probab=99.87  E-value=4.4e-20  Score=186.02  Aligned_cols=327  Identities=12%  Similarity=0.117  Sum_probs=208.4

Q ss_pred             CCceeecCCC-C-CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP-A-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp-~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT  144 (430)
                      ++++.++.|- . +.++.+++++.+.+.+..    ..|..   .....+..+.+.+.+.+..|.  +++.+|++ ++|++
T Consensus        28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~----~~Y~~---~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~-t~G~~   99 (387)
T PRK07683         28 DNLISLTIGQPDFPTPSHVKEAAKRAITENY----TSYTH---NAGLLELRKAACNFVKDKYDLHYSPESEIIV-TIGAS   99 (387)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC----CCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE-eCChH
Confidence            4556666653 2 456788888888765311    01100   112222233333333333354  33225665 57899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +|+..++..++++||+|++..+.+.++.  ..++..| +++.++...   .+..+|.++++  ++++++++++++++|||
T Consensus       100 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~i~i~~p~NPt  174 (387)
T PRK07683        100 EAIDIAFRTILEPGTEVILPAPIYPGYE--PIIRLCGAKPVFIDTRS---TGFRLTAEALENAITEKTRCVVLPYPSNPT  174 (387)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCccchH--HHHHHcCCEEEEeecCc---ccCCCCHHHHHHhcCcCceEEEEeCCCCCC
Confidence            9999999998899999998766554432  3455668 777777642   23345666776  67789999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcCCC---Cccccccc------cEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNFCS---KPVDVTRF------GVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~idl~~~------d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      |..++  +   |.++ +++|+++++|++++...   .+..+..+      .+++.|++|.+|.+|  +|++++++++++.
T Consensus       175 G~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~  254 (387)
T PRK07683        175 GVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKH  254 (387)
T ss_pred             CcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHH
Confidence            99998  3   4443 58899999999976332   11122222      278899999999779  9999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +.....    +        ....++...+.++...|+.-.  ..++..++++++.++.+++.|.+ .|+.+.+  +  .+
T Consensus       255 ~~~~~~----~--------~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~--~--~~  315 (387)
T PRK07683        255 ILKVHQ----Y--------NVTCASSISQYAALEALTAGK--DDAKMMRHQYKKRRDYVYNRLIS-MGLDVEK--P--TG  315 (387)
T ss_pred             HHHHHH----h--------ccCCCChHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHH-cCCcccC--C--Ce
Confidence            432110    1        112334455666655554211  12556778888899999999986 5665442  1  12


Q ss_pred             cceEEEEcCCCch-hHHHHHH-HHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          365 FMNVPFTLEKSDL-EAEFVKE-AAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       365 ~~iv~f~~~~~~~-~~~~~~~-L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ...+...+++... +.++... |+++||.+.+|..    ..+++||+++.  ++++++..++.|.+++++.
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~~  384 (387)
T PRK07683        316 AFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY--SIETLKEGLDRLEAFLQQK  384 (387)
T ss_pred             eEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence            2223333442122 3367765 5778999888753    14689999985  6889999999999987754

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.87  E-value=3.6e-20  Score=187.19  Aligned_cols=320  Identities=14%  Similarity=0.153  Sum_probs=206.4

Q ss_pred             CceeecCC-C-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-----CCCCCcEEEEEeCc
Q 043610           70 RVFNFAAG-P-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-----NIPQEYSVLFLQGG  142 (430)
Q Consensus        70 ~~~l~~~g-p-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-----g~~~~~~vv~~~~g  142 (430)
                      .++.|..| | .++|+.+++++.+......          .+.+.  .-..++|+.+++++     +++++ +|++ ++|
T Consensus        31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~----------~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~-~i~~-t~G   96 (397)
T PRK07568         31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEVL----------AYSHS--QGIPELREAFAKYYKKWGIDVEPD-EILI-TNG   96 (397)
T ss_pred             CEEEecCCCCCCCCCHHHHHHHHHHhcCCc----------CcCCC--CCCHHHHHHHHHHHHHhCCCCCcc-eEEE-cCC
Confidence            34545443 3 3568888888876542110          11110  11235556666665     45555 6766 578


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC-CCCccccc--cCCCccEEEEeecC
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK-IPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~-~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      +++++..++..++++||+|++..+.+...  ...++..| +++.++...+  .|. .+++++++  +++++++|++++++
T Consensus        97 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~g~~~~~~~~l~~~~~~~~~~v~i~~p~  172 (397)
T PRK07568         97 GSEAILFAMMAICDPGDEILVPEPFYANY--NGFATSAGVKIVPVTTKIE--EGFHLPSKEEIEKLITPKTKAILISNPG  172 (397)
T ss_pred             hHHHHHHHHHHhcCCCCEEEEecCCCccH--HHHHHHcCCEEEEeecCcc--cCCCCCCHHHHHHhcCccceEEEEECCC
Confidence            99999999988889999999877654432  23455667 7777776421  232 23457776  67889999999999


Q ss_pred             CCccccCC-----CCccc-cCCCcEEEEeccCcCC---CC-c---ccccc-cc--EEEeCCCccccCCc--cEEEEEc-H
Q 043610          219 TIHGVEFK-----EYPSA-KNSTGILVADMSSNFC---SK-P---VDVTR-FG--VIYAGAQKNVGPSG--VTIVIVR-K  279 (430)
Q Consensus       219 t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G---~~-~---idl~~-~d--~~~~s~~K~~gp~G--~g~l~v~-~  279 (430)
                      ||||.+++     +|.++ +++|+++++|+++..-   .. .   ..+.. .+  +++.|++|.+|++|  +|+++.+ +
T Consensus       173 NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~  252 (397)
T PRK07568        173 NPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNK  252 (397)
T ss_pred             CCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCH
Confidence            99999998     35554 5889999999987521   11 1   12222 23  78899999999778  8888874 5


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      ++++.+....          .   ...+++...+.++..+|+...  ..++.+++++++.++.+.+.|++..|+.+..  
T Consensus       253 ~~~~~~~~~~----------~---~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--  315 (397)
T PRK07568        253 ELIAAAMKLC----------Q---ARLSPPTLEQIGAAALLDTPE--SYFDEVREEYKKRRDILYEELNKIPGVVCEK--  315 (397)
T ss_pred             HHHHHHHHHh----------h---ccCCCCcHHHHHHHHHhhCCH--HHHHHHHHHHHHHHHHHHHHHhcCCCceecC--
Confidence            6665431100          0   012445567777777775321  2356778888899999999998744554432  


Q ss_pred             CCCCccceEEEEcCCCchhHHHHHHHHH------cCCeecCCCCC-------CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEAEFVKEAAK------EKMVQLKGHRS-------VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~~~~~~L~~------~Gi~~~~g~~~-------~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +  .....+.+.++.. ...++.+.|.+      +||.+.+|...       .+++|+|++.  +++++++.++.|++++
T Consensus       316 p--~g~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~--~~~~~~~~~~~l~~~l  390 (397)
T PRK07568        316 P--KGAFYIIAKLPVD-DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL--NEEDLKRAMEILKEAL  390 (397)
T ss_pred             C--CcceEEEEecCCC-CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC--CHHHHHHHHHHHHHHH
Confidence            1  1222344566642 23368887754      58988876421       2489999974  6799999999999888


Q ss_pred             Hhh
Q 043610          427 AKH  429 (430)
Q Consensus       427 ~~~  429 (430)
                      +++
T Consensus       391 ~~~  393 (397)
T PRK07568        391 EKY  393 (397)
T ss_pred             HHh
Confidence            754

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.87  E-value=1.2e-20  Score=186.11  Aligned_cols=278  Identities=15%  Similarity=0.121  Sum_probs=191.4

Q ss_pred             HHHHHHHHHhCCC------CCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC
Q 043610          119 KAESDLRALLNIP------QEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       119 ~~r~~la~l~g~~------~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ++++.++++++..      .+ ++++ ++|+|+++..++.++.++||+|++...++++..  ..++..| +++.++... 
T Consensus        40 ~l~~~l~~~l~~~~~~~~~~~-~~~~-~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~~~~~i~~~~-  114 (350)
T cd00609          40 ELREAIAEWLGRRGGVDVPPE-EIVV-TNGAQEALSLLLRALLNPGDEVLVPDPTYPGYE--AAARLAGAEVVPVPLDE-  114 (350)
T ss_pred             HHHHHHHHHHHHHhCCCCCcc-eEEE-ecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHCCCEEEEEeccc-
Confidence            4445555555433      33 5666 578999999999999889999998877776643  4566677 777777643 


Q ss_pred             CcCCCCCCc--cccc--cCCCccEEEEeecCCCccccCC--CCc---cc-cCCCcEEEEeccCcCCCC----c---cccc
Q 043610          192 EKYTKIPNF--DALE--QNPDAKYLHICANETIHGVEFK--EYP---SA-KNSTGILVADMSSNFCSK----P---VDVT  254 (430)
Q Consensus       192 ~~~g~~~d~--~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~---~~-~~~g~~lvvD~a~s~G~~----~---idl~  254 (430)
                        .+. .+.  +.++  +++++++|++++++|+||...|  ++.   ++ +++|+++++|++++.+..    +   ....
T Consensus       115 --~~~-~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~  191 (350)
T cd00609         115 --EGG-FLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLD  191 (350)
T ss_pred             --ccC-CccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcC
Confidence              221 222  3343  5788999999999999999999  455   44 689999999999876432    1   1222


Q ss_pred             c--ccEEEeCCCccccCCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH
Q 043610          255 R--FGVIYAGAQKNVGPSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGL  329 (430)
Q Consensus       255 ~--~d~~~~s~~K~~gp~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~  329 (430)
                      .  .|+++.|++|+++.+|  +|++++++ ++.+.+....            ....++++...+.++..+|+...  .++
T Consensus       192 ~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~--~~~  257 (350)
T cd00609         192 AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL------------PYTTSGPSTLSQAAAAAALDDGE--EHL  257 (350)
T ss_pred             ccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHH------------HhcccCCChHHHHHHHHHHhCcH--HHH
Confidence            3  3588899999997434  89999988 6666532110            01135778888888888887543  257


Q ss_pred             HHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEe
Q 043610          330 NEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRAS  405 (430)
Q Consensus       330 ~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis  405 (430)
                      +.+.+++.++++++.+.|.+ .+....  ... .+...+.+.+++......+.+.|.++||.+..+..    ...++||+
T Consensus       258 ~~~~~~~~~~~~~l~~~L~~-~~~~~~--~~~-~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~  333 (350)
T cd00609         258 EELRERYRRRRDALLEALKE-LGPLVV--VKP-SGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLS  333 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cCCccc--cCC-CccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEE
Confidence            88999999999999999997 443321  111 23344556666421222466677788999876532    23479999


Q ss_pred             ecCCCCHHHHHHHHHHHHH
Q 043610          406 IYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       406 ~~~~~t~edv~~ll~~L~~  424 (430)
                      ++.+  .+|+++++++|++
T Consensus       334 ~~~~--~~~i~~~~~al~~  350 (350)
T cd00609         334 FATP--EEELEEALERLAE  350 (350)
T ss_pred             eeCC--HHHHHHHHHHhhC
Confidence            9986  9999999999863

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>PLN02822 serine palmitoyltransferase

Probab=99.87  E-value=5.7e-20  Score=189.51  Aligned_cols=332  Identities=16%  Similarity=0.120  Sum_probs=218.8

Q ss_pred             CCCCCceeecCC-C--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           66 GQEDRVFNFAAG-P--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        66 ~~~~~~~l~~~g-p--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      ...+++++|+.+ .  ...++.+++++.+.+.++. .|++. ..+.+  ...+...++++.|+++++.++  .+++. +|
T Consensus       106 ~~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G-~g~~g-~r~~y--g~~~~~~~Lee~La~~~~~~~--~i~~s-~G  178 (481)
T PLN02822        106 INGKDVVNFASANYLGLIGNEKIKESCTSALEKYG-VGSCG-PRGFY--GTIDVHLDCETKIAKFLGTPD--SILYS-YG  178 (481)
T ss_pred             ECCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhC-CCCcc-cCccc--cCHHHHHHHHHHHHHHhCCCC--EEEEC-CH
Confidence            455667788765 2  2358899999999987652 22221 01111  124567799999999999874  56654 55


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c--CCCc-cEEEEee
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q--NPDA-KYLHICA  216 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~-~lv~i~~  216 (430)
                      ++ ++.+++.++.++||.|++-...+++.  ..-.+..+ +++.++..+...+  ..++++++  .  .+++ ++|++..
T Consensus       179 ~~-a~~sai~a~~~~gd~Ii~d~~~H~s~--~~~~~ls~~~~~~~~~nd~~~l--~~~l~~~~~~~~~~~~~~~~Ivve~  253 (481)
T PLN02822        179 LS-TIFSVIPAFCKKGDIIVADEGVHWGI--QNGLYLSRSTIVYFKHNDMESL--RNTLEKLTAENKRKKKLRRYIVVEA  253 (481)
T ss_pred             HH-HHHHHHHHhCCCCCEEEEeCCccHHH--HHHHHHcCCeEEEECCCCHHHH--HHHHHHHhhhhcccCCCcEEEEEec
Confidence            44 67888888899999887433323332  11222234 5555543211001  01112222  1  1345 6888888


Q ss_pred             cCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------ccc--ccccEEEeCCCccccCCccEEEEEcHHHH
Q 043610          217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VDV--TRFGVIYAGAQKNVGPSGVTIVIVRKDLL  282 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------idl--~~~d~~~~s~~K~~gp~G~g~l~v~~~~~  282 (430)
                      +.+++|.+.|  +|.++ +++|+++++|++|++|...         +++  ++.|++++|++|.+|+.| ||++.+++++
T Consensus       254 i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G-G~i~g~~~ii  332 (481)
T PLN02822        254 IYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG-GFCTGSARVV  332 (481)
T ss_pred             CCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC-eEEEcCHHHH
Confidence            8899999999  78887 6899999999999977531         233  356899999999999889 9999999988


Q ss_pred             hccCCCCCccccccchhhcCCCC-CCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLY-NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~-~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      +.......           +..+ +..|...+.++.++|+.+..   .+++.++++++++++++.|.+..|+.+..  + 
T Consensus       333 ~~~~~~~~-----------~~~fsa~lPp~~~~Aa~~aL~~l~~---~~~~~~~l~~~~~~l~~~L~~~~g~~~~~--~-  395 (481)
T PLN02822        333 DHQRLSSS-----------GYVFSASLPPYLASAAITAIDVLED---NPSVLAKLKENIALLHKGLSDIPGLSIGS--N-  395 (481)
T ss_pred             HHHHhcCC-----------ceeeccccCHHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHhcCCcccCC--C-
Confidence            76432111           1112 22345566677778886642   26788999999999999999755776532  1 


Q ss_pred             CCccceEEEEcCCC-c----h---hHHHHHHHH-HcCCeecCCCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          362 VRSFMNVPFTLEKS-D----L---EAEFVKEAA-KEKMVQLKGHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       362 ~rs~~iv~f~~~~~-~----~---~~~~~~~L~-~~Gi~~~~g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ..++ ++.+.+++. +    .   ..+++++|. ++||.+.++..       ....+||++...++++||+++++.|+++
T Consensus       396 ~~sp-i~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~  474 (481)
T PLN02822        396 TLSP-IVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRV  474 (481)
T ss_pred             CCCC-EEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            2343 565666531 0    0   135888875 78999875421       1236999999889999999999999988


Q ss_pred             HHh
Q 043610          426 QAK  428 (430)
Q Consensus       426 ~~~  428 (430)
                      +..
T Consensus       475 ~~~  477 (481)
T PLN02822        475 AAS  477 (481)
T ss_pred             HHH
Confidence            764

>PRK07337 aminotransferase; Validated

Probab=99.87  E-value=3.3e-20  Score=186.97  Aligned_cols=327  Identities=15%  Similarity=0.160  Sum_probs=208.1

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ga  143 (430)
                      .+.++.|+.|-  .++++.+.+++.+.+.+    +...|...   ....+..+.+.+.+.+.+|.  +++ +|+++ +|+
T Consensus        29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~---~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~t-~G~   99 (388)
T PRK07337         29 GRDIIHMGIGEPDFTAPEPVVEAAARALRR----GVTQYTSA---LGLAPLREAIAAWYARRFGLDVAPE-RIVVT-AGA   99 (388)
T ss_pred             CCCEEEeCCcCCCCCCCHHHHHHHHHHHhc----CCCCCCCC---CCCHHHHHHHHHHHHHHhCCCCChH-hEEEe-cCc
Confidence            34556666654  34577889998877642    11111111   11222233333444444454  554 67665 789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      ++++..++..++++||+|++..+.+.+..  ..++..| +++.++...+..+  .+|+++++  +++++++|++++++||
T Consensus       100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~l~~p~NP  175 (388)
T PRK07337        100 SAALLLACLALVERGDEVLMPDPSYPCNR--HFVAAAEGRPVLVPSGPAERF--QLTAADVEAAWGERTRGVLLASPSNP  175 (388)
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCchhhH--HHHHHcCCEEEEeecCCccCC--cCCHHHHHhhcCccceEEEEECCCCC
Confidence            99999999999999999998877766542  3345567 7777776432223  47788886  6889999999999999


Q ss_pred             ccccCC--C---Cccc-cCCCcEEEEeccCc-CCCC--ccccccc--c-EEEeCCCccccCCc--cEEEEEcHHHHhccC
Q 043610          221 HGVEFK--E---YPSA-KNSTGILVADMSSN-FCSK--PVDVTRF--G-VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQ  286 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~--d-~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~  286 (430)
                      ||..++  +   |.++ +++++++++|+++. +...  +.....+  + +++.|++|.+|.+|  +|++++++++++.+.
T Consensus       176 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~  255 (388)
T PRK07337        176 TGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFE  255 (388)
T ss_pred             CCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHH
Confidence            999998  3   4443 57899999998864 3321  1222222  2 56789999999888  899999988877643


Q ss_pred             CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                      ....            ....+.+...+.++..+++.-. ...+++.++++++.++.+.+.|++ .|+.... .+  .+..
T Consensus       256 ~~~~------------~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~r~~~~~~L~~-~~~~~~~-~p--~~g~  318 (388)
T PRK07337        256 KLAQ------------NLFICASALAQHAALACFEPDT-LAIYERRRAEFKRRRDFIVPALES-LGFKVPV-MP--DGAF  318 (388)
T ss_pred             HHHH------------HhccCCChHHHHHHHHHhccCc-hHHHHHHHHHHHHHHHHHHHHHHh-cCCcccc-CC--CeeE
Confidence            2110            0112345556666666664100 012456677888888999999987 5664321 12  1223


Q ss_pred             eEEEEcCCC----ch-hHHHHHHH-HHcCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          367 NVPFTLEKS----DL-EAEFVKEA-AKEKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       367 iv~f~~~~~----~~-~~~~~~~L-~~~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .+.+.+++.    .. +.+|+.+| +++||.+.+|..     ..+++||+++.  ++++++..++.|.+++
T Consensus       319 f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        319 YVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGKLF  387 (388)
T ss_pred             EEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence            344566531    12 33688774 678999887642     14689999985  5788888888887764

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.87  E-value=5.9e-20  Score=184.26  Aligned_cols=313  Identities=12%  Similarity=0.100  Sum_probs=202.6

Q ss_pred             ceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--------CCCCcEEEEEe
Q 043610           71 VFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--------IPQEYSVLFLQ  140 (430)
Q Consensus        71 ~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--------~~~~~~vv~~~  140 (430)
                      .+.++.  .|.++|+.+++++.+.+.....       .+++. .  .-..++|+.++++++        ++++ +|++ +
T Consensus        30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Y~-~--~G~~~Lr~aia~~~~~~~~~~~~v~~~-~I~i-t   97 (374)
T PRK02610         30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGIE-------SNRYP-D--GGHEALKQAIAEYVNESAAGSSQITPA-NISV-G   97 (374)
T ss_pred             eeEecCCCCCCCCCHHHHHHHHHHHhhccc-------ccCCC-C--CchHHHHHHHHHHhCccccccCCCCHH-HEEE-c
Confidence            444444  3456888999999876542100       01111 1  012366777777776        5665 6766 5


Q ss_pred             CcHHHHHHHHHhhcCCCCC-cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----CCccEE
Q 043610          141 GGATTQFAAVPLNLCTPND-PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----PDAKYL  212 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd-~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~~~~lv  212 (430)
                      +|+++++..++.+++.+|| +|++..+.+..+  ...++..| +++.++..++ .+  .+|+++++  +.    +++++|
T Consensus        98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~--~~~~~~~g~~~~~~~~~~~-~~--~~d~~~l~~~~~~~~~~~~k~i  172 (374)
T PRK02610         98 NGSDELIRSLLIATCLGGEGSILVAEPTFSMY--GILAQTLGIPVVRVGRDPE-TF--EIDLAAAQSAIEQTQNPPVRVV  172 (374)
T ss_pred             CChHHHHHHHHHHHcCCCCCeEEEcCCChHHH--HHHHHHcCCEEEEecCCcc-cC--CCCHHHHHHHHHhhcCCCceEE
Confidence            8899999988887777776 787766665543  24566778 7777776421 23  47888886  43    589999


Q ss_pred             EEeecCCCccccCC--CCccc--cCCCcEEEEeccCc-CCCCc--ccccccc--EEEeCCCccccCCc--cEEEEEcHHH
Q 043610          213 HICANETIHGVEFK--EYPSA--KNSTGILVADMSSN-FCSKP--VDVTRFG--VIYAGAQKNVGPSG--VTIVIVRKDL  281 (430)
Q Consensus       213 ~i~~~~t~tG~~~p--ei~~~--~~~g~~lvvD~a~s-~G~~~--idl~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~  281 (430)
                      ++++++||||..++  ++.++  ..+++++++|+++. +...+  -.+...+  +++.|++|.+|.+|  +||++.++++
T Consensus       173 ~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l  252 (374)
T PRK02610        173 FVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPEL  252 (374)
T ss_pred             EEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecCHHH
Confidence            99999999999999  44443  13589999999875 22111  1122223  67899999999889  9999999888


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+....              ...+.+...+.++..+++....  -.+.+.+. .+.++.+.+.|++..|+.+.+    
T Consensus       253 ~~~l~~~~--------------~~~~~~~~~q~a~~~~l~~~~~--~~~~~~~~-~~~r~~l~~~L~~~~~~~~~p----  311 (374)
T PRK02610        253 IAVLEKVR--------------LPYNLPSFSQLAAQLALEHRQE--LLAAIPEI-LQERDRLYQALQELPQLRVWP----  311 (374)
T ss_pred             HHHHHHhc--------------CCCCCCHHHHHHHHHHhcCHHH--HHHHHHHH-HHHHHHHHHHHHhCCCcEeCC----
Confidence            87643211              0123455677777777753221  13334444 344677888887644665432    


Q ss_pred             CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+ .-+.+.+++...+.++.+.|.++||.+.++   .+++|||++   +.++++++++.|+++++.
T Consensus       312 ~~g-~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~---~~~lRls~~---~~~~~~~~l~~l~~~l~~  371 (374)
T PRK02610        312 SAA-NFLYLRLSQDAALAALHQALKAQGTLVRHT---GGGLRITIG---TPEENQRTLERLQAALTQ  371 (374)
T ss_pred             Ccc-eEEEEeCCCCCCHHHHHHHHHHCCEEEEeC---CCeEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence            123 234466664212337888999999988643   357999987   467889999999988753

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.87  E-value=4.5e-20  Score=187.12  Aligned_cols=320  Identities=14%  Similarity=0.070  Sum_probs=208.1

Q ss_pred             CCceeecCCC--C-CCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--A-NLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ++.++|...-  + ..+|+|++++.+.+.++. +.+.+.. .+    ......+++++.|++++|.+   ..+++ +||+
T Consensus        45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~-~~----~~~~~~~~le~~la~~~g~~---~~~~~-~SG~  115 (406)
T PRK13393         45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRN-IS----GTNHYHVLLEAELADLHGKE---AALLF-TSGY  115 (406)
T ss_pred             ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCccccc-cc----CChHHHHHHHHHHHHHhCCC---cEEEe-CCcH
Confidence            4456665532  1 247789999999988753 2222211 11    11235678899999999974   34555 4567


Q ss_pred             HHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-----cC-CCccEEEEe
Q 043610          145 TQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-----QN-PDAKYLHIC  215 (430)
Q Consensus       145 ~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-----i~-~~~~lv~i~  215 (430)
                      +++..++..+.+  +||. ++++..+++. .....+..| ++..++.         .|+++++     .. +++++|+++
T Consensus       116 ~An~~ai~~l~~~~~g~~-I~~~~~~H~s-~~~~~~~~g~~~~~~~~---------~d~~~l~~~l~~~~~~~~~~v~~~  184 (406)
T PRK13393        116 VSNWAALSTLGSRLPGCV-ILSDELNHAS-MIEGIRHSRAEKRIFRH---------NDPADLERKLSDLDPHRPKLVAFE  184 (406)
T ss_pred             HHHHHHHHHhhcCCCCCE-EEEccchhHH-HHHHHHHcCCeEEEeCC---------CCHHHHHHHHHhccCCCCEEEEEc
Confidence            899888877654  6664 4444443332 122233345 4433332         2334443     22 468899999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-c--------ccc-ccccEEEeCCCccccCCccEEEEEcHHHH
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-P--------VDV-TRFGVIYAGAQKNVGPSGVTIVIVRKDLL  282 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-~--------idl-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~  282 (430)
                      ++.+++|.+.|  +|.++ +++|+++++|++|++|.. +        .++ .+.|+++.++.|.+|..| |+++.+++++
T Consensus       185 ~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G-G~~~~~~~~~  263 (406)
T PRK13393        185 SVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG-GYITGSAALC  263 (406)
T ss_pred             CCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC-ceeeCCHHHH
Confidence            99999999999  78886 688999999999986652 1        112 224678889999999778 8888888877


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+......+          ...++.+...+.++.++|+.+.+ .+  ..+++..++++++++.|++ .|+.+++  +  
T Consensus       264 ~~l~~~~~~~----------~~t~~~~p~~~aa~~aaL~~~~~-~~--~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--  325 (406)
T PRK13393        264 DFIRSFASGF----------IFTTSLPPAVAAGALASVRHLKA-SS--AERERHQDRVARLRARLDK-AGIPHLP--N--  325 (406)
T ss_pred             HHHHHhCcCc----------eecCccCHHHHHHHHHHHHHHhh-CH--HHHHHHHHHHHHHHHHHHH-cCCCcCC--C--
Confidence            6543211100          11245666777888899997753 22  3356778889999999986 5776542  1  


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHH-cCCeecCCC---C--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGH---R--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~---~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++ ++.+.+++.....++.++|.+ +||.+.+..   .  ..+.+||+++.+++++|+++++++|+++++.
T Consensus       326 ~~~-i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~  396 (406)
T PRK13393        326 PSH-IVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWAR  396 (406)
T ss_pred             CCC-eEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence            243 455555431112368888876 599975421   1  1246999999999999999999999998764

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.87  E-value=3.3e-20  Score=187.02  Aligned_cols=327  Identities=13%  Similarity=0.083  Sum_probs=206.3

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ga  143 (430)
                      ...+++|+.|-  .++++.+.+++.+.+.+..   ...|...   ....+..+.+.+.+.+..|.  +++.+|++ ++|+
T Consensus        29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~---~G~~~lr~aia~~~~~~~g~~~~~~~~I~i-t~Gs  101 (388)
T PRK07366         29 GKELIDLSLGSSDLPAPAHALEAIAQSLHDPS---THGYLLF---HGTLDFREAAAQWYEQRFGLAVDPETEVLP-LIGS  101 (388)
T ss_pred             CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcc---cCCCCCC---CCCHHHHHHHHHHHHHhhCCcCCCcCeEEE-CCCc
Confidence            44567776654  4567888998887654210   0001111   11222333444444444454  44324554 5789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      .+++..++..++.+||+|++..+.+..+.  ..++..| +++.++..++  .+..+|+++++  +.+++++|++++++||
T Consensus       102 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~~~~~~k~i~l~~p~NP  177 (388)
T PRK07366        102 QEGTAHLPLAVLNPGDFALLLDPGYPSHA--GGVYLAGGQIYPMPLRAE--NDFLPVFADIPTEVLAQARLMVLSYPHNP  177 (388)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCCcchH--HHHHhcCCEEEEEECCCc--cCCCCCHHHHHHhhcccceEEEEeCCCCC
Confidence            99999999999999999998777765542  3456678 8888887532  22346666764  5678999999999999


Q ss_pred             ccccCC--CC---ccc-cCCCcEEEEeccCcCC---C-C-c---cccccc-c--EEEeCCCccccCCc--cEEEEEcHHH
Q 043610          221 HGVEFK--EY---PSA-KNSTGILVADMSSNFC---S-K-P---VDVTRF-G--VIYAGAQKNVGPSG--VTIVIVRKDL  281 (430)
Q Consensus       221 tG~~~p--ei---~~~-~~~g~~lvvD~a~s~G---~-~-~---idl~~~-d--~~~~s~~K~~gp~G--~g~l~v~~~~  281 (430)
                      ||..++  ++   .++ +++|+++++|+++.--   . . .   .+++.. +  +++.|++|.+|.+|  +|+++.++++
T Consensus       178 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~l  257 (388)
T PRK07366        178 TTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQL  257 (388)
T ss_pred             CCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHH
Confidence            999999  33   443 5789999999986521   1 1 1   122221 3  57799999999888  9999999988


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+..... ..          ..++.+ ..+.++..++..-  ...++.+++++++.++.+.+.|++ .|+...  .+ 
T Consensus       258 i~~l~~~~~-~~----------~~~~~~-~~~~~a~~~l~~~--~~~l~~~~~~~~~~r~~l~~~L~~-~~~~~~--~p-  319 (388)
T PRK07366        258 IQALRQVKA-VV----------DFNQYR-GILNGAIAALTGP--QATVQQTVQIFRQRRDAFINALHQ-IGWPVP--LP-  319 (388)
T ss_pred             HHHHHHHHh-hc----------ccCCCH-HHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHH-CCCccc--CC-
Confidence            876532110 00          112222 2223333444311  124678888899999999999986 576432  12 


Q ss_pred             CCccceEEEEcCCC-c-hhHHHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          362 VRSFMNVPFTLEKS-D-LEAEFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       362 ~rs~~iv~f~~~~~-~-~~~~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       .+..-+.+.+++. . .+.++.+.| +++||.+.+|..    ..+++||+++.  +++++++.++.|++++
T Consensus       320 -~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~l  388 (388)
T PRK07366        320 -EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIAAFL  388 (388)
T ss_pred             -CeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC--CHHHHHHHHHHHHHhC
Confidence             1223344566642 1 133687776 677999888742    13689999974  6889999999888753

>PRK07550 hypothetical protein; Provisional

Probab=99.87  E-value=8.5e-20  Score=183.87  Aligned_cols=324  Identities=15%  Similarity=0.135  Sum_probs=211.6

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~  145 (430)
                      ..+.|+.|-  .+.++.+.+++.+.+.+..   ...|..   .....++.+.+.+.+.+..|.  +++ +|++ ++|+++
T Consensus        30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~-t~G~~~  101 (386)
T PRK07550         30 PLIDLSQAVPGYPPPPELLRALAEAAADPA---AHLYGP---VEGLPELREAYAAHYSRLYGAAISPE-QVHI-TSGCNQ  101 (386)
T ss_pred             CeEEeCCCCCCCCCCHHHHHHHHHHHhCcC---CcCCCC---CCCCHHHHHHHHHHHHHHhCCCCCcc-eEEE-ecCcHH
Confidence            345555443  2446778888776653211   111100   112233444555666666564  444 6776 478999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      ++..++..++++||+|++..+.++.+.  ..++..| +++.++..++  .+..+|+++++  +++++++|++++++||||
T Consensus       102 al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG  177 (386)
T PRK07550        102 AFWAAMVTLAGAGDEVILPLPWYFNHK--MWLDMLGIRPVYLPCDEG--PGLLPDPAAAEALITPRTRAIALVTPNNPTG  177 (386)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchH--HHHHhcCCEEEEEecCCC--cCCCCCHHHHHHHhcccCcEEEEeCCCCCCC
Confidence            999999999899999998777665542  3456677 8888877432  23346777787  677899999999999999


Q ss_pred             ccCC-----CCccc-cCCCcEEEEeccCcCCC----Ccccc---ccc---cEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          223 VEFK-----EYPSA-KNSTGILVADMSSNFCS----KPVDV---TRF---GVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       223 ~~~p-----ei~~~-~~~g~~lvvD~a~s~G~----~~idl---~~~---d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      ..++     +|.++ +++|+++++|++++...    .+..+   .+.   .+++.|++|.+|.+|  +|+++.+++.++.
T Consensus       178 ~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~  257 (386)
T PRK07550        178 VVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAE  257 (386)
T ss_pred             cccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHH
Confidence            9998     35554 58899999999865221    11111   112   267899999999777  8999999888765


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +....    .        ....+++...+.++..+|+.+.+  .++..++++++.++.+.+.|.+..++.+.+     ..
T Consensus       258 ~~~~~----~--------~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~g  318 (386)
T PRK07550        258 IEKFM----D--------TVAICAPRIGQIAVAWGLPNLAD--WRAGNRAEIARRRDAFRAVFARLPGWELLA-----SG  318 (386)
T ss_pred             HHHHH----h--------hcccCCCcHHHHHHHHHhccHHH--HHHHHHHHHHHHHHHHHHHHHhCCCceeCC-----Cc
Confidence            43210    0        11134566777777777765332  356677888889999999998644554322     12


Q ss_pred             cceEEEEcCCCch-hHHHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          365 FMNVPFTLEKSDL-EAEFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       365 ~~iv~f~~~~~~~-~~~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ...+.+.++..+. ..+++++| +++||.+.+|..    ..+++||++.. .+++++++.++.|+++
T Consensus       319 ~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        319 AYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN-ADVAGIGELVERLRAF  384 (386)
T ss_pred             eEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence            2334455653123 34788886 567999988642    13579999974 4689999999999876

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.87  E-value=1e-19  Score=179.79  Aligned_cols=317  Identities=15%  Similarity=0.167  Sum_probs=223.7

Q ss_pred             CCCceeecC----CCCCCcHHHHHHHHHHhhhc-cCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAA----GPANLPEKVLLKAQSELYNW-RGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~----gp~~~~~~V~~a~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .+++++|+.    |-+ -.+.+++++.+.+..| .+.+.|..-.     .......++++.||+++|.+.   .+++ +|
T Consensus        38 ~~~~~nf~SNdYLGLa-~~~~~~~a~~~~~~~~g~g~~gsR~i~-----G~~~~h~~LE~~lA~f~g~e~---al~f-~S  107 (388)
T COG0156          38 GRKVLNFCSNDYLGLA-SHPELIEAAKAAIRRYGVGAGGSRLIS-----GTSDLHVELEEELADFLGAEA---ALLF-SS  107 (388)
T ss_pred             CceeEeeeccCccccc-CCHHHHHHHHHHHHHhCCCCCCcCccc-----CCcHHHHHHHHHHHHHhCCCc---EEEE-cc
Confidence            566777766    444 4456999999988875 3444443222     223667799999999999985   3444 57


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc--cCC------CccEEEE
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHI  214 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i  214 (430)
                      +..|+..++.++++++|-++.   +...|......-++.+...+...    +   .|+++|+  +.+      +.++|+.
T Consensus       108 Gy~AN~~~i~~l~~~~dli~~---D~lnHASiidG~rls~a~~~~f~----H---nD~~~Le~~l~~~~~~~~~~~~Ivt  177 (388)
T COG0156         108 GFVANLGLLSALLKKGDLIFS---DELNHASIIDGIRLSRAEVRRFK----H---NDLDHLEALLEEARENGARRKLIVT  177 (388)
T ss_pred             cchhHHHHHHHhcCCCcEEEE---echhhhhHHHHHHhCCCcEEEec----C---CCHHHHHHHHHhhhccCCCceEEEE
Confidence            899999999999988876653   23333333344455422222221    1   4666666  322      3577777


Q ss_pred             eecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------ccc--ccccEEEeCCCccccCCccEEEEEcHH
Q 043610          215 CANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VDV--TRFGVIYAGAQKNVGPSGVTIVIVRKD  280 (430)
Q Consensus       215 ~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------idl--~~~d~~~~s~~K~~gp~G~g~l~v~~~  280 (430)
                      -.+-+..|.+-|  +|+++ ++|+++++||++|++|..-         +.+  .+.|++++++.|.+|-.| |++..+..
T Consensus       178 egVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G-g~v~g~~~  256 (388)
T COG0156         178 EGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG-GYIAGSAA  256 (388)
T ss_pred             eccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC-ceeeCcHH
Confidence            788999999999  89998 6999999999999998752         223  344799999999999888 99999998


Q ss_pred             HHhccCCC-CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          281 LLGNAQDK-TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       281 ~~~~~~~~-~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      +++.+... .|+.+           ..+.|.....++.++|+.+.+   ..+.+++.+++..++++.+.. .|+...+  
T Consensus       257 ~~d~L~~~ar~~if-----------StalpP~~aaa~~~al~~l~~---~~~~r~~L~~~~~~~~~~~~~-~~~~~~~--  319 (388)
T COG0156         257 LIDYLRNRARPFIF-----------STALPPAVAAAALAALRILEE---GPERRERLQELAAFFRSLLKA-LGLVLLP--  319 (388)
T ss_pred             HHHHHHHhCCceec-----------cCCCCHHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHh-cCCccCC--
Confidence            88874432 33322           135666777888899998763   378899999999999977764 6776532  


Q ss_pred             CCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC---CCCCC--CeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---GHRSV--GGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g~~~~--g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                        ..+ .|+++.+.+.....++...|.++||.+..   .....  ..+|+++...+|++||++++++|.++
T Consensus       320 --s~s-~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         320 --SES-PIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             --CCC-CeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence              234 36777776533333688888888998642   22223  36999999999999999999999875

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.86  E-value=1.8e-19  Score=181.45  Aligned_cols=324  Identities=13%  Similarity=0.117  Sum_probs=206.0

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT  144 (430)
                      +.+++|+.|.  .++++.+++++...+.+    ....|....   ...+..+.+.+.+.+.+|  ++++ +|++ ++|++
T Consensus        29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~Y~~~~---G~~~lr~~ia~~~~~~~~~~~~~~-~i~i-t~G~~   99 (384)
T PRK06348         29 PDIIDLSLGDPDLITDESIINAAFEDAKK----GHTRYTDSG---GDVELIEEIIKYYSKNYDLSFKRN-EIMA-TVGAC   99 (384)
T ss_pred             CCcEEcCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCCC---CcHHHHHHHHHHHHHHhCCCCChh-hEEE-cCChH
Confidence            3456666554  23456777765554321    111111111   112233344444444334  4554 6776 47899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +++..++.+++++||+|++..+.+.++.  ..++..| ++..++..++  .+..+|+++++  +++++++|++++++|||
T Consensus       100 ~al~~~~~~~~~~gd~vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt  175 (384)
T PRK06348        100 HGMYLALQSILDPGDEVIIHEPYFTPYK--DQIEMVGGKPIILETYEE--DGFQINVKKLEALITSKTKAIILNSPNNPT  175 (384)
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCCcchH--HHHHHcCCEEEEecCCcC--cCCcCCHHHHHHhhCcCccEEEEeCCCCCC
Confidence            9999999999999999998777665542  3455567 6666665322  23347888887  67889999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcCC---CCccc---ccc-c--cEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNFC---SKPVD---VTR-F--GVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~~id---l~~-~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      |..++  +   |.++ +++|+++++|+++.--   .....   +.. .  -+++.|++|.+|.+|  +|++++++++++.
T Consensus       176 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~  255 (384)
T PRK06348        176 GAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIET  255 (384)
T ss_pred             CcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHH
Confidence            99999  3   4443 5889999999987622   11112   221 1  277899999999778  8999999888765


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +....           . ....+.+...+.++..+|+...+  -++.+++.++++++++++.|.+..|+.+.+  +  .+
T Consensus       256 ~~~~~-----------~-~~~~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~--p--~g  317 (384)
T PRK06348        256 AKIIN-----------E-GICFSAPTISQRAAIYALKHRDT--IVPLIKEEFQKRLEYAYKRIESIPNLSLHP--P--KG  317 (384)
T ss_pred             HHHHH-----------H-hccCCCCHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHhcCCCceecc--C--Ce
Confidence            42100           0 11124566777777777753221  256778888888899999998644555432  1  12


Q ss_pred             cceEEEEcCCCch-hHHHHHHHH-HcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          365 FMNVPFTLEKSDL-EAEFVKEAA-KEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       365 ~~iv~f~~~~~~~-~~~~~~~L~-~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ...+.+.+++.+. +.++++.|. ++||.+.+|...    .+++|||+.  .++++++..++.|+++
T Consensus       318 g~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~  382 (384)
T PRK06348        318 SIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEKM  382 (384)
T ss_pred             eEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence            2334456653223 337888774 679998876532    358999996  3788888888888764

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.86  E-value=9.6e-20  Score=184.14  Aligned_cols=322  Identities=14%  Similarity=0.100  Sum_probs=207.9

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC---CCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI---PQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~---~~~~~vv~~~~g  142 (430)
                      ++.++.++.|-  .++++.+.+++.+.+.+..     .|...   ....++.+.+.+.+.+.+|.   +++.+|++ ++|
T Consensus        28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~-----~Y~~~---~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~i-t~G   98 (396)
T PRK09147         28 DLPPISLSIGEPKHPTPAFIKDALAANLDGLA-----SYPTT---AGLPALREAIAAWLERRYGLPALDPATQVLP-VNG   98 (396)
T ss_pred             CCCeEecCCCCCCCCCCHHHHHHHHHHhhhhc-----CCCCC---CCCHHHHHHHHHHHHHHhCCCcCCccceEEE-CCC
Confidence            45566666544  3457788888877653210     11111   11233344555555555574   33225665 588


Q ss_pred             HHHHHHHHHhhcCCC---CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee
Q 043610          143 ATTQFAAVPLNLCTP---NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA  216 (430)
Q Consensus       143 aT~a~~~~~~sl~~~---gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~  216 (430)
                      +++++..++..+++|   ||.|++..+++..+.  ..++..| +++.++..++..|  .+|+++++  +.++++++++++
T Consensus        99 ~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~--~~~~~~g~~~~~vp~~~~~~~--~~d~~~l~~~~~~~~k~i~l~n  174 (396)
T PRK09147         99 SREALFAFAQTVIDRDGPGPLVVCPNPFYQIYE--GAALLAGAEPYFLNCDPANNF--APDFDAVPAEVWARTQLLFVCS  174 (396)
T ss_pred             hHHHHHHHHHHHcCCCCCCCEEEEcCCCccchH--HHHHhcCCEEEEeccCccccC--ccCHHHHHHHHhhccEEEEEcC
Confidence            999999999999998   888998777665432  3455667 8888887532223  47888885  567899999999


Q ss_pred             cCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC-----Cccc-------c--cccc--EEEeCCCccccCCc--c
Q 043610          217 NETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS-----KPVD-------V--TRFG--VIYAGAQKNVGPSG--V  272 (430)
Q Consensus       217 ~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~-----~~id-------l--~~~d--~~~~s~~K~~gp~G--~  272 (430)
                      ++||||.+++  +   |.++ +++++++++|+++..-.     .+..       +  ++.+  +++.|++|.+|.+|  +
T Consensus       175 P~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRi  254 (396)
T PRK09147        175 PGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRS  254 (396)
T ss_pred             CCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCcccee
Confidence            9999999999  3   4443 58899999999876321     1111       1  1233  78899999998888  8


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG  352 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G  352 (430)
                      |+++.++++++.+.....            ....+++...+.++..++..   ...+...++++++.++.+.+.|.+.  
T Consensus       255 G~~~~~~~l~~~~~~~~~------------~~~~~~~~~~q~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~L~~~--  317 (396)
T PRK09147        255 GFVAGDAALLKKFLLYRT------------YHGCAMPPAVQAASIAAWND---EAHVRENRALYREKFDAVTPILAPV--  317 (396)
T ss_pred             eeecCCHHHHHHHHHHhh------------hcccCCCHHHHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHHHHh--
Confidence            999999888776432110            01123455556655555532   1245677788888888888888752  


Q ss_pred             ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCC----------CCeeEEeecCCCCHHHHHHHHHH
Q 043610          353 FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRS----------VGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       353 ~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~----------~g~iRis~~~~~t~edv~~ll~~  421 (430)
                      +.+.  .+  ....-+.+.++.  .+.++++.| +++||.+.+|...          .+++||++..  +++++++.++.
T Consensus       318 ~~~~--~p--~~g~f~~~~~~~--~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~r  389 (396)
T PRK09147        318 LDVQ--LP--DAGFYLWAKVPG--DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAER  389 (396)
T ss_pred             cCCC--CC--CeeEEEEEECCC--CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHH
Confidence            3221  11  122234456651  234788877 4679998876421          3579999985  68889999999


Q ss_pred             HHHHHH
Q 043610          422 MKDFQA  427 (430)
Q Consensus       422 L~~~~~  427 (430)
                      |+++++
T Consensus       390 l~~~~~  395 (396)
T PRK09147        390 IVDFCR  395 (396)
T ss_pred             HHHHhc
Confidence            988764

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.86  E-value=1.7e-19  Score=178.67  Aligned_cols=305  Identities=15%  Similarity=0.109  Sum_probs=202.1

Q ss_pred             ccCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           64 QSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      .+......++++-|-+ -.|.+++++.+.+.+|.  |.            .+..+++++.+++++|.+++ +++++ +|+
T Consensus        18 ~~~~~~~~~~~ylgl~-~~~~~~~~~~~~~~~~~--g~------------~~~~~~Le~~lA~~~g~~~e-~ilv~-~gg   80 (346)
T TIGR03576        18 ISRGGRDSLYDLTGLA-GGFKIDEEDLELLETYV--GP------------AIFEEKVQELGREHLGGPEE-KILVF-NRT   80 (346)
T ss_pred             HhccCCccccccccCC-CChhHHHHHHHHHHHhc--CC------------HHHHHHHHHHHHHHcCCCcc-eEEEE-CCH
Confidence            4555566677777775 45578888888887652  21            25677999999999999775 67765 789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHH-HHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCc
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAF-KEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIH  221 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~-~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~t  221 (430)
                      ++++..++.++++|||+|++..++...+.++ ..++..| ++  +..         .++++++..+++++|+++. .+++
T Consensus        81 ~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~--~~~---------~~l~~l~~~~~~~lIiitg-~s~~  148 (346)
T TIGR03576        81 SSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEY--FES---------DELSELKKIDGTSLVVITG-STMD  148 (346)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEE--ecc---------CCHHHHhhCcCceEEEEEC-CCCC
Confidence            9999999999999999998643322222222 2344445 32  211         1233344235688888864 6788


Q ss_pred             cccCC-----CCccc-cCCCcEEEEeccCcCCCCc-cc---ccc--ccEEEeCCCccc-cCCccEEEEEcHHHHhccCCC
Q 043610          222 GVEFK-----EYPSA-KNSTGILVADMSSNFCSKP-VD---VTR--FGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       222 G~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~~-id---l~~--~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~  288 (430)
                      |.+.+     +|.++ +++|+++++|++|+.|... .+   ...  .|+++.|++|++ |+.| ||++.++++++.+...
T Consensus       149 G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r~-G~v~~~~~li~~l~~~  227 (346)
T TIGR03576       149 LKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPRG-GLLAGRKELVDKIKSV  227 (346)
T ss_pred             CcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccce-EEEEeCHHHHHHHHHh
Confidence            99875     45554 5789999999999876421 11   111  378899999988 7876 9999999998875432


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      ...            ...|.+.+.++++..+|+.+    ..+.++++++++++++++.+.+   +.+.+      ++.++
T Consensus       228 ~~~------------~~~s~~~~~~~aa~~aL~~~----~~~~~~~~l~~r~~~~~~~l~~---~~~~~------~~~~f  282 (346)
T TIGR03576       228 GEQ------------FGLEAQAPLLAAVVRALEEF----ELSRIRDAFKRKEEVYLRLFDK---LNVER------TPTGF  282 (346)
T ss_pred             hcC------------cccCccHHHHHHHHHHHhhc----cHHHHHHHHHHHHHHHHHHHHh---CCCCc------CCCeE
Confidence            111            11245666778888888743    2356778888888888888763   33322      22233


Q ss_pred             E-EEcCCCchhHHHH-HHHHHcCCeecCCCC---CCCeeEEeecCCCCHH---HHHHHHHHHHHHH
Q 043610          369 P-FTLEKSDLEAEFV-KEAAKEKMVQLKGHR---SVGGMRASIYNAMPLA---GVEKLVAFMKDFQ  426 (430)
Q Consensus       369 ~-f~~~~~~~~~~~~-~~L~~~Gi~~~~g~~---~~g~iRis~~~~~t~e---dv~~ll~~L~~~~  426 (430)
                      . +.+++ ..+.+++ +.|+++||.+.++..   ..+++|||++.  +++   ++++++++|++-+
T Consensus       283 ~~~~~~~-~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~--~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       283 VIKGVEE-EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAA--KDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             EEEeCCC-CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEec--ChHHhcCHHHHHHHHHhcc
Confidence            2 34542 1122444 456788999988643   25689999984  333   7999999998754

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.86  E-value=1.2e-19  Score=184.26  Aligned_cols=337  Identities=14%  Similarity=0.092  Sum_probs=210.5

Q ss_pred             CCCCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhC--CCCCcEE
Q 043610           67 QEDRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLN--IPQEYSV  136 (430)
Q Consensus        67 ~~~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g--~~~~~~v  136 (430)
                      ..+.++.++.|.      .+.|+.+++++.+.+.+..        ..+++  ....+..+.+.+.+.+.+|  ++++ +|
T Consensus        30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~--------~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~-~I  100 (409)
T PLN00143         30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAK--------FNSYAPTGGILPARRAIADYLSNDLPYQLSPD-DV  100 (409)
T ss_pred             CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcC--------CCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHh-hE
Confidence            455677777654      3788899999988765311        11111  1122222333333333333  4554 67


Q ss_pred             EEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEE
Q 043610          137 LFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLH  213 (430)
Q Consensus       137 v~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~  213 (430)
                      +++ +|+++++..++..++++||+|++..+.+..+.  ..++..| ++..++...+  .+..+|+++++  +.+++++++
T Consensus       101 ~it-~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~~~  175 (409)
T PLN00143        101 YLT-LGCKHAAEIIIKVLARPEANILLPRPGFPDVE--TYAIFHHLEIRHFDLLPE--KGWEVDLDAVEAIADENTIAMV  175 (409)
T ss_pred             EEe-cChHHHHHHHHHHHcCCCCEEEEcCCCCcCHH--HHHHHcCCEEEEEeccCC--CCCcCCHHHHHHhcccCCEEEE
Confidence            765 78999999999999999999998877765542  3455667 7777766422  23347888887  577899999


Q ss_pred             EeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC---CCCc-cc---ccccc--EEEeCCCccccCCc--cEEEE
Q 043610          214 ICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF---CSKP-VD---VTRFG--VIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       214 i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~---G~~~-id---l~~~d--~~~~s~~K~~gp~G--~g~l~  276 (430)
                      +++++||||.+++  +   |.++ +++++++++|+++..   ...+ ..   ++..+  +++.|++|.++.+|  +||++
T Consensus       176 ~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v  255 (409)
T PLN00143        176 IINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLV  255 (409)
T ss_pred             EECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEE
Confidence            9999999999999  3   4443 578999999998752   2221 11   22222  68899999999888  89998


Q ss_pred             Ec-H-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCce
Q 043610          277 VR-K-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY  354 (430)
Q Consensus       277 v~-~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~  354 (430)
                      ++ + .+++.+.. ..   .+.....  .... .+.+.+.++..+|+.-. .+.+++..+++++.++++++.|.+ .+..
T Consensus       256 ~~~p~~~~~~~~~-~~---~~~~~~~--~~~~-~~~~~q~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~L~~-~~~~  326 (409)
T PLN00143        256 TCDPSGLLQICEI-AD---SIKKALN--PAPF-PPTFIQAAIPEILEKTT-EDFFSKTINILRAALAFCYDKLKE-IPCI  326 (409)
T ss_pred             eeCchhhhhhHHH-HH---HHHHHHh--ccCC-CCchHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHHhc-CCCC
Confidence            83 4 33221100 00   0000000  0111 25566777776665210 123567778888888888898886 3322


Q ss_pred             ecCCCCCCCccceEEEEcCCC---c--hhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          355 KCPVEKSVRSFMNVPFTLEKS---D--LEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~~---~--~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ... ..+. ...-+.+.++..   +  .+.+++..| .++||.+.+|..  ..+++||+++.  +++++++.++.|++++
T Consensus       327 ~~~-~~p~-gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~--~~~~l~~al~rl~~~l  402 (409)
T PLN00143        327 MCP-QKAE-GAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV--EQSSLEDGLGRLKSFC  402 (409)
T ss_pred             CCC-CCCC-eeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC--CHHHHHHHHHHHHHHH
Confidence            211 1111 222344566521   1  233666554 778999988753  35689999984  6899999999999998


Q ss_pred             HhhC
Q 043610          427 AKHA  430 (430)
Q Consensus       427 ~~~~  430 (430)
                      .+|.
T Consensus       403 ~~~~  406 (409)
T PLN00143        403 GRHA  406 (409)
T ss_pred             HHhc
Confidence            8763

>PRK08068 transaminase; Reviewed

Probab=99.86  E-value=1e-19  Score=183.49  Aligned_cols=321  Identities=12%  Similarity=0.068  Sum_probs=200.0

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGA  143 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ga  143 (430)
                      ++++++.|-  .+.++.+.+++.+.+.+..        ..+++  ....++.+++.+.+.+.+|.  +++.+|++ ++|+
T Consensus        33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~i-t~G~  103 (389)
T PRK08068         33 DVINLGQGNPDQPTPEHIVEALQEAAENPA--------NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAI-LFGG  103 (389)
T ss_pred             CeEEecCCCCCCCCCHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEE-cCCc
Confidence            456666543  2345678888877664210        11121  11222233333333333464  44324665 5788


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      ++++..++..++++||+|++..+++..+.  ..++..| ++..++..++  .|..+|+++++  +.+++++|++++++||
T Consensus       104 ~~~l~~~~~~~~~~gd~vlv~~P~y~~~~--~~~~~~g~~~~~i~~~~~--~~~~~d~~~l~~~~~~~~~~v~l~~P~NP  179 (389)
T PRK08068        104 KAGLVELPQCLMNPGDTILVPDPGYPDYL--SGVALARAQFETMPLIAE--NNFLPDYTKIPEEVAEKAKLMYLNYPNNP  179 (389)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCCcchH--HHHHhcCCEEEEeecccc--cCCCCCHHHHHHhccccceEEEEECCCCC
Confidence            99999998988899999998877765543  2455677 7777877432  23356777776  5678999999999999


Q ss_pred             ccccCC--C---Cccc-cCCCcEEEEeccCcC-C--C-Ccccc---cc---ccEEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          221 HGVEFK--E---YPSA-KNSTGILVADMSSNF-C--S-KPVDV---TR---FGVIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~-G--~-~~idl---~~---~d~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      ||..++  +   |.++ +++++++++|+++.. .  . .+..+   .+   ..+++.|++|.+|.+|  +|+++.+++++
T Consensus       180 TG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~  259 (389)
T PRK08068        180 TGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVI  259 (389)
T ss_pred             CCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHH
Confidence            999999  3   4443 578999999998742 1  1 12121   11   2378899999999889  99999999888


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+......            ...+.+...+.++..+|..-.  ..++..++++++.++.+.+.|++ .|+.+.+  +  
T Consensus       260 ~~l~~~~~~------------~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~r~~~~~~L~~-~g~~~~~--~--  320 (389)
T PRK08068        260 EAINLLQDH------------LFVSLFGAIQDAAIEALLSDQ--SCVAELVARYESRRNAFISACRE-IGWEVDA--P--  320 (389)
T ss_pred             HHHHHHHhh------------ccCCCChHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHH-CCCcccC--C--
Confidence            765321110            111222233444445553211  23577788889999999999986 5765432  1  


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      .+...+.+.+++.....++.+.|.+ +||.+.+|..    ..+++||+++.  +++.+...++.|++
T Consensus       321 ~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~~  385 (389)
T PRK08068        321 KGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT--DEERLREAVERIGK  385 (389)
T ss_pred             CeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence            1222345667642223378888875 6999887642    14589999973  45555555555543

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.86  E-value=1.5e-19  Score=183.01  Aligned_cols=328  Identities=12%  Similarity=0.112  Sum_probs=213.8

Q ss_pred             CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ga  143 (430)
                      .+.++.++.|-.  +.++.+.+++.+.+.+    +...|...   ....+..+.+.+.+++.+|.  .++ +|++ ++|+
T Consensus        32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~----~~~~Y~~~---~G~~~lr~~ia~~l~~~~g~~~~~~-~i~~-t~G~  102 (402)
T PRK06107         32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIER----GETKYTLV---NGTPALRKAIIAKLERRNGLHYADN-EITV-GGGA  102 (402)
T ss_pred             cCCEEEcCCCCCCCCCCHHHHHHHHHHHHc----CCCCCCCC---CCCHHHHHHHHHHHHHhcCCCCChh-hEEE-eCCH
Confidence            345667766543  3467888888877642    11111111   12234456777788888887  344 6776 5789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      ++|+..++.+++++||.|++..+.+.++.  ......+ .++.++...+  .+..+|+++++  +.+++++|++++++||
T Consensus       103 ~~al~~~~~~~~~~gd~vl~~~p~y~~y~--~~~~~~~~~~~~v~~~~~--~~~~~~~~~l~~~~~~~~~~v~l~~p~NP  178 (402)
T PRK06107        103 KQAIFLALMATLEAGDEVIIPAPYWVSYP--DMVLANDGTPVIVACPEE--QGFKLTPEALEAAITPRTRWLILNAPSNP  178 (402)
T ss_pred             HHHHHHHHHHhcCCCCEEEEecCCCcCHH--HHHHHcCCEEEEecCCcc--cCCCCCHHHHHhhcCcCceEEEEECCCCC
Confidence            99999999888899999998776554442  2233344 5555655322  23346777776  6778999999999999


Q ss_pred             ccccCC--C---Cccc-cCC-CcEEEEeccCcC---CCCc-c---cc-ccc-c--EEEeCCCccccCCc--cEEEEEcHH
Q 043610          221 HGVEFK--E---YPSA-KNS-TGILVADMSSNF---CSKP-V---DV-TRF-G--VIYAGAQKNVGPSG--VTIVIVRKD  280 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~-g~~lvvD~a~s~---G~~~-i---dl-~~~-d--~~~~s~~K~~gp~G--~g~l~v~~~  280 (430)
                      ||...+  +   |.++ +++ ++++++|++++.   ...+ .   .+ .++ +  +++.|++|.+|++|  +|+++.+++
T Consensus       179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~  258 (402)
T PRK06107        179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPAD  258 (402)
T ss_pred             CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHH
Confidence            999998  3   4443 466 899999998752   1111 1   11 111 2  67889999999889  699999998


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +++.+...    .+        ....+++...++++..+|+.-.  .-++...+++++.++.+++.|++..|+.+.+  +
T Consensus       259 ~~~~~~~~----~~--------~~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~--p  322 (402)
T PRK06107        259 LIAAINKL----QS--------QSSSCPSSISQAAAAAALNGDQ--SFVTESVAVYKQRRDYALALLNAIPGLSCLV--P  322 (402)
T ss_pred             HHHHHHHH----HH--------hcccCCChHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHHHHHHHhcCCCCcccC--C
Confidence            87764320    00        1123567778888887775211  1356777888888999999998644665432  1


Q ss_pred             CCCccceEEEEcCC-------Cc----hhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          361 SVRSFMNVPFTLEK-------SD----LEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       361 ~~rs~~iv~f~~~~-------~~----~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       . +...+.+.+++       .+    .+.+++.+| +++||.+.+|..  ..+++|||++.  +.+++++.++.|++++
T Consensus       323 -~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~--~~e~l~~~l~~l~~~l  398 (402)
T PRK06107        323 -D-GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT--SLETLEEACARIERAV  398 (402)
T ss_pred             -C-cceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHH
Confidence             1 22223334321       01    123677665 668999988753  25689999995  7899999999999987


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       399 ~~  400 (402)
T PRK06107        399 AA  400 (402)
T ss_pred             Hh
Confidence            64

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.86  E-value=1.8e-19  Score=180.35  Aligned_cols=305  Identities=11%  Similarity=0.079  Sum_probs=204.3

Q ss_pred             CCCCCCcHHHHHHHHHHhhhccCCCCcccccCCC-cHHHHHHHHHHHHHHHHHh----C--CCCCcEEEEEeCcHHHHHH
Q 043610           76 AGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHR-GKEFKSIIEKAESDLRALL----N--IPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        76 ~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~-~~~~~~~~~~~r~~la~l~----g--~~~~~~vv~~~~gaT~a~~  148 (430)
                      ..|.++|+.+++++.+.+.+... .     ...+ ...    ..++|+.+++++    |  ++++ +|++ ++|+++++.
T Consensus        35 ~~~~~~~~~~~~al~~~l~~~~~-~-----~~~Y~~~g----~~~lr~aia~~~~~~~~~~~~~~-~I~i-t~G~~~~l~  102 (368)
T PRK03317         35 ENPYPPSPALVADIAEAVAEAAA-G-----LNRYPDRD----AVALRADLAAYLTAQTGVGLTVE-NVWA-ANGSNEILQ  102 (368)
T ss_pred             CCCCCCCHHHHHHHHHHHhhhhh-h-----hccCCCCc----hHHHHHHHHHHhhhhccCCCChh-hEEE-CCCHHHHHH
Confidence            35677889999999887643110 0     1111 111    235566666666    4  4555 6665 588999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCcccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGVE  224 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~~  224 (430)
                      .++..+++|||.|++..+.+..+.  ..++..| ++..++..+  ++  .+|+++++  +. +++++|++++++||||..
T Consensus       103 ~~~~~~~~~gd~v~v~~P~y~~~~--~~~~~~g~~~~~~~~~~--~~--~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~  176 (368)
T PRK03317        103 QLLQAFGGPGRTALGFVPSYSMHP--IIARGTHTEWVEGPRAA--DF--TLDVDAAVAAIAEHRPDVVFLTSPNNPTGTA  176 (368)
T ss_pred             HHHHHhcCCCCEEEEeCCChHHHH--HHHHhcCCeeEEcccCC--CC--CCCHHHHHHHHhccCCCEEEEeCCCCCCCCC
Confidence            999999999999998777765543  2344556 554444321  23  46888876  43 578999999999999999


Q ss_pred             CC--CCccc-cCCCcEEEEeccCcCCC---Cc--ccc-ccc-c-EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCc
Q 043610          225 FK--EYPSA-KNSTGILVADMSSNFCS---KP--VDV-TRF-G-VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPL  291 (430)
Q Consensus       225 ~p--ei~~~-~~~g~~lvvD~a~s~G~---~~--idl-~~~-d-~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~  291 (430)
                      .+  ++.++ +..++++++|++++...   .+  ..+ ... + +++.|++|.+|.+|  +|+++.++++++.+....  
T Consensus       177 ~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~--  254 (368)
T PRK03317        177 LPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVR--  254 (368)
T ss_pred             CCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcC--
Confidence            99  67665 44579999999976321   11  111 112 3 67789999999778  799999999887653211  


Q ss_pred             cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE-
Q 043610          292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF-  370 (430)
Q Consensus       292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f-  370 (430)
                                  .....+...+.++..+|+...   .+.+..+++.+.++.+.+.|++ .|+.+.+  +  .++. +.+ 
T Consensus       255 ------------~~~~~s~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~~~-~~~~  313 (368)
T PRK03317        255 ------------LPYHLSAVTQAAARAALRHAD---ELLASVAALRAERDRVVAWLRE-LGLRVAP--S--DANF-VLFG  313 (368)
T ss_pred             ------------CCCCCCHHHHHHHHHHhhCHH---HHHHHHHHHHHHHHHHHHHHHH-CCCEeCC--C--CCcE-EEEe
Confidence                        112345667777777776432   2345556677888889999986 6776542  1  1222 222 


Q ss_pred             EcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          371 TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       371 ~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++   ...++.+.|.++||.+.+. ...+++||+++   +.+++++++++|+++++.
T Consensus       314 ~~~---~~~~~~~~l~~~Gv~v~~~-~~~~~iRi~~~---~~~~~~~~~~~l~~~~~~  364 (368)
T PRK03317        314 RFA---DRHAVWQGLLDRGVLIRDV-GIPGWLRVTIG---TPEENDAFLAALAEVLAT  364 (368)
T ss_pred             ccC---CHHHHHHHHHHCCEEEEeC-CCCCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence            222   1346888999999998653 23568999987   689999999999998753

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.86  E-value=3.1e-19  Score=178.12  Aligned_cols=313  Identities=14%  Similarity=0.067  Sum_probs=207.9

Q ss_pred             CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      .+++.|+.|  |.++|+.+++++.+.+..          ..++...  . ..++|+.++++++++++ +|+++ +|++++
T Consensus        22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~----------~~~Y~~~--~-~~~Lr~aia~~~~v~~~-~I~it-~G~~~~   86 (360)
T PRK07392         22 DAILDFSASINPLGPPESVIAAIQSALSA----------LRHYPDP--D-YRELRLALAQHHQLPPE-WILPG-NGAAEL   86 (360)
T ss_pred             ccEEEeCCcCCCCCCCHHHHHHHHHHHHH----------hhcCCCc--C-HHHHHHHHHHHhCcChh-hEEEC-CCHHHH
Confidence            355666654  466788999998876542          1112211  1 24788899999999886 77764 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC-CCCCccccc-cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT-KIPNFDALE-QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g-~~~d~~~l~-i~~~~~lv~i~~~~t~tG~  223 (430)
                      +..++..+ .+||.|++..+.+..+  ...++..| +++.++...+..+. ...++++++ ..++++++++++++||||.
T Consensus        87 i~~~~~~l-~~g~~vlv~~P~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nP~NPTG~  163 (360)
T PRK07392         87 LTWAGREL-AQLRAVYLITPAFGDY--RRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNNPHNPTGK  163 (360)
T ss_pred             HHHHHHHh-CCCCeEEEECCCcHHH--HHHHHHcCCeEEEEecccccCCcccccCHHHHHHhccCCCEEEEeCCCCCCCC
Confidence            99988876 4688888777665554  24566678 88888775321110 123344443 3457899999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCC---Cc---cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCC
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCS---KP---VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKT  289 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~---~~---id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~  289 (430)
                      .++  +|.++ ++++ ++++|+++.--.   .+   +. ++..+  +++.|++|.+|.+|  +|++++++++++.+....
T Consensus       164 ~~~~~~l~~l~~~~~-~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~  242 (360)
T PRK07392        164 LWSREAILPLLEQFA-LVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWR  242 (360)
T ss_pred             CcCHHHHHHHHHHCC-EEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhC
Confidence            999  67775 5666 577799865211   11   11 12223  78899999999889  999999988877643211


Q ss_pred             CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEE
Q 043610          290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP  369 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~  369 (430)
                                    ...+.+...+.++..+|+.-   .-.+.+.+++++.++++.+.|++..|+.+.+   + .+. -+.
T Consensus       243 --------------~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~---~-~~~-fl~  300 (360)
T PRK07392        243 --------------DPWPVNGLAAAAAIAALADR---DFQQQTWAWLPPAREALFQGLASLPGLTPLP---S-AAN-FLL  300 (360)
T ss_pred             --------------CCCCCCHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC---C-CCC-EEE
Confidence                          11356777788887777531   1234556777888899999998655776542   1 122 233


Q ss_pred             EEcCCCchhHHHHHHH-HHcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          370 FTLEKSDLEAEFVKEA-AKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       370 f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +.++.  .+.++.+.| +++||.+.+|...    .+++||+++   +.++.+++.++|+++.+
T Consensus       301 ~~~~~--~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~~~l~~al~~~~~  358 (360)
T PRK07392        301 VQSQG--SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLLEALAAILA  358 (360)
T ss_pred             EEcCC--CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence            44442  233688775 6679998877532    358999998   57778899999988764

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.86  E-value=9.1e-20  Score=184.10  Aligned_cols=319  Identities=14%  Similarity=0.116  Sum_probs=201.7

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC----CCCCcEEEEEeCc
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN----IPQEYSVLFLQGG  142 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g----~~~~~~vv~~~~g  142 (430)
                      +..+.|+.|-  .++|+.+++++.+.+....     .|...   ....++.+.+.+.+.+.+|    ++++.+|++ ++|
T Consensus        28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-----~Y~~~---~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~i-t~G   98 (393)
T TIGR03538        28 KPPIALSIGEPKHPTPAFVLEALRENLHGLS-----TYPTT---KGLPELRQAIARWLERRFDLPTGVDPERHVLP-VNG   98 (393)
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHhhccC-----CCCCC---CCCHHHHHHHHHHHHHhhCCcccCCCCceEEE-CCC
Confidence            4456665543  3567889999887653210     11111   1112223344444444434    344325655 588


Q ss_pred             HHHHHHHHHhhcCCCCCc--EEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          143 ATTQFAAVPLNLCTPNDP--VDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~--vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      +++++..++..+++|||+  |++..+.+..+.  ..++..| +++.++..++  .|..+|+++++  +.+++|+|+++++
T Consensus        99 a~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~~~~~~k~i~l~~p  174 (393)
T TIGR03538        99 TREALFAFAQAVINPGQAPLVVMPNPFYQIYE--GAALLAGAEPYFLNCTAE--NGFLPDFDAVPESVWRRCQLLFVCSP  174 (393)
T ss_pred             cHHHHHHHHHHHcCCCCcceEEecCCCCcchH--HHHHhcCCeEEEeecccc--CCCCCCHHHHHHHHhhcceEEEEeCC
Confidence            999999999999999997  555555544432  3455677 8877877532  23347777776  5678999999999


Q ss_pred             CCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC-----Cccc-------cc--ccc--EEEeCCCccccCCc--cE
Q 043610          218 ETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS-----KPVD-------VT--RFG--VIYAGAQKNVGPSG--VT  273 (430)
Q Consensus       218 ~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~-----~~id-------l~--~~d--~~~~s~~K~~gp~G--~g  273 (430)
                      +||||..++  +   |.++ +++|+++++|+++..-.     .+..       +.  ..+  +++.|++|.++.+|  +|
T Consensus       175 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG  254 (393)
T TIGR03538       175 GNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSG  254 (393)
T ss_pred             CCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceE
Confidence            999999999  3   4443 57899999999875221     1111       11  123  78899999998778  89


Q ss_pred             EEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc
Q 043610          274 IVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF  353 (430)
Q Consensus       274 ~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~  353 (430)
                      +++.++++++.+....    .        ....+.+...+.++..++..   ...++..++++++.++.+.+.|.+.  +
T Consensus       255 ~~i~~~~l~~~~~~~~----~--------~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~L~~~--~  317 (393)
T TIGR03538       255 FVAGDAEILKAFLRYR----T--------YHGCAMPIPTQLASIAAWND---EQHVRENRALYREKFAAVLEILGQV--L  317 (393)
T ss_pred             EEecCHHHHHHHHHHH----H--------hhccCcCHHHHHHHHHHhcC---hHHHHHHHHHHHHHHHHHHHHHHhh--C
Confidence            9999988877643210    0        01123455566666555542   1246777888888888899998763  2


Q ss_pred             eecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCC----------CCeeEEeecCCCCHHHHHHHHHHH
Q 043610          354 YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRS----------VGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       354 ~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~----------~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      .+.  .+  ....-+.+.++.  .+.++.+.| +++||.+.+|...          .+++|||+..  +++++++.++.|
T Consensus       318 ~~~--~p--~gg~f~~~~~~~--~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l  389 (393)
T TIGR03538       318 DLE--LP--DAGFYLWPKVPG--DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERI  389 (393)
T ss_pred             ccc--CC--CeeEEEEEECCC--CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHH
Confidence            221  11  122234456651  134688887 4679998776421          3579999986  688999999988


Q ss_pred             HHH
Q 043610          423 KDF  425 (430)
Q Consensus       423 ~~~  425 (430)
                      +++
T Consensus       390 ~~~  392 (393)
T TIGR03538       390 RSF  392 (393)
T ss_pred             HHh
Confidence            875

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.86  E-value=3.2e-19  Score=180.70  Aligned_cols=329  Identities=15%  Similarity=0.119  Sum_probs=208.8

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT  144 (430)
                      ++++.++.|-  .+.|+.+++++.+.+.+....+.   ..   .....++.+.+.+.+.+.+|.+  ++.+|++ ++|+.
T Consensus        33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y---~~---~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~i-t~G~~  105 (403)
T PRK08636         33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGY---SV---SKGIYKLRLAICNWYKRKYNVDLDPETEVVA-TMGSK  105 (403)
T ss_pred             CCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCC---CC---CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEE-CCChH
Confidence            4566666543  22466778877765532100111   11   1122334445556666655753  3214665 57899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcccc----c--c---CCCccEEEE
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDAL----E--Q---NPDAKYLHI  214 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l----~--i---~~~~~lv~i  214 (430)
                      +++..++..++.|||.|++.+++++...  ..++..| ++..++...+..+  .+|++.+    +  +   .++++++++
T Consensus       106 ~al~~~~~~l~~~gd~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~~~~i~~  181 (403)
T PRK08636        106 EGYVHLVQAITNPGDVAIVPDPAYPIHS--QAFILAGGNVHKMPLEYNEDF--ELDEDQFFENLEKALRESSPKPKYVVV  181 (403)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCCcchH--HHHHhcCCEEEEEeccccccC--ccChhhhhhHHHHHHhhccCCceEEEE
Confidence            9999999999999999998887766543  3455667 7777776422123  3565543    3  2   368999999


Q ss_pred             eecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---CCc-c---ccccc-c--EEEeCCCccccCCc--cEEEE
Q 043610          215 CANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---SKP-V---DVTRF-G--VIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       215 ~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~~-i---dl~~~-d--~~~~s~~K~~gp~G--~g~l~  276 (430)
                      ++++||||.+++  +   |.++ +++++++++|++++.-   ..+ .   .++.. +  +++.|++|.+|.+|  +|+++
T Consensus       182 ~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv  261 (403)
T PRK08636        182 NFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVV  261 (403)
T ss_pred             eCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeee
Confidence            999999999999  3   4443 5899999999987522   111 1   12222 3  45789999999888  99999


Q ss_pred             EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      .++++++.+....    ++        .....+.+.+.++..+++...  ..++.+++.+++.++.+.+.|.+ .|+.+.
T Consensus       262 ~~~~li~~~~~~~----~~--------~~~~~~~~~q~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~  326 (403)
T PRK08636        262 GNKKLVGALKKIK----SW--------LDYGMFTPIQVAATIALDGDQ--SCVEEIRETYRKRRDVLIESFAN-AGWELQ  326 (403)
T ss_pred             CCHHHHHHHHHHH----HH--------hcccCChHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHH-CCCccc
Confidence            9998877643210    00        001223334444444443211  23667788888899999999987 566543


Q ss_pred             CCCCCCCccceEEEEcCCC--ch-hHHHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          357 PVEKSVRSFMNVPFTLEKS--DL-EAEFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~~~--~~-~~~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .  +  .....+.+.+++.  .. +.+++.+| +++||.+.+|..    ..+++||++.  .+++++++.++.|++++++
T Consensus       327 ~--p--~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~  400 (403)
T PRK08636        327 K--P--RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKE  400 (403)
T ss_pred             C--C--CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence            2  1  1223455677642  11 24788764 568999988742    2358999997  4789999999999999887


Q ss_pred             h
Q 043610          429 H  429 (430)
Q Consensus       429 ~  429 (430)
                      |
T Consensus       401 ~  401 (403)
T PRK08636        401 L  401 (403)
T ss_pred             h
Confidence            5

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.85  E-value=2.8e-19  Score=194.58  Aligned_cols=324  Identities=11%  Similarity=0.066  Sum_probs=221.4

Q ss_pred             CceeecCCCCC----CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGPAN----LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp~~----~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .+|....|.+.    +|+.|++++.+... |. +..++|.. .-++...+.+.+.+..+++++|.+.+ ++.++ .++|.
T Consensus       102 ~~~~~fiG~G~y~~~~P~~v~~~i~~~~~-~~-TaytPYqa-EisQG~lqal~~~Qt~ia~LtG~~~a-naSL~-d~aTA  176 (993)
T PLN02414        102 KVFKSYIGMGYYNTHVPPVILRNILENPG-WY-TQYTPYQA-EIAQGRLESLLNYQTMITDLTGLPMS-NASLL-DEGTA  176 (993)
T ss_pred             CccccccCCCCCCccCCHHHHHHHHhChH-HH-hhcCCCch-HHHHHHHHHHHHHHHHHHHHhCCChh-hEeec-CChHH
Confidence            34555556555    77777788776542 11 11122211 12356678889999999999999976 77775 78999


Q ss_pred             HHHHHHhhc-CCCC--CcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCC
Q 043610          146 QFAAVPLNL-CTPN--DPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANET  219 (430)
Q Consensus       146 a~~~~~~sl-~~~g--d~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t  219 (430)
                      +.+++++++ +++|  |+|++.+..+.+..  |...+++.| ++++++...   ..        ...+++- ..++|..|
T Consensus       177 aaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~---~~--------~~~~~v~-~vlvq~P~  244 (993)
T PLN02414        177 AAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD---FD--------YSSGDVC-GVLVQYPA  244 (993)
T ss_pred             HHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh---hc--------cccCceE-EEEEecCC
Confidence            999988776 4544  67887666665543  444566678 777666421   11        0112222 33577788


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-ccccc--cEEEeCCCccccCCc-----cEEEEEcHHHHhccCCC
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV-DVTRF--GVIYAGAQKNVGPSG-----VTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i-dl~~~--d~~~~s~~K~~gp~G-----~g~l~v~~~~~~~~~~~  288 (430)
                      .+|.+.|  +|+++ +++|++++| +++.++..++ +..++  |++++++|||.+|.|     .||+++++++...+.. 
T Consensus       245 ~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~Pg-  322 (993)
T PLN02414        245 TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPG-  322 (993)
T ss_pred             CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCC-
Confidence            8999999  78886 789999999 8888887776 46666  799999999986666     7999999988654321 


Q ss_pred             CCccccccchh-------------hc--CCCCCCccHHHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          289 TPLMLDYKIHD-------------EN--NSLYNTPPCYCIYMCGLVFEYLL----ELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       289 ~p~~~~~~~~~-------------~~--~~~~~T~~~~~~~a~~~al~~l~----~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                        .+.+|....             +.  ....+|.|+....++.+++....    ...|++++.+|+.+++.+++++|.+
T Consensus       323 --riVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~  400 (993)
T PLN02414        323 --RIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK  400 (993)
T ss_pred             --cccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh
Confidence              112221100             00  11246888866666665554221    1359999999999999999999986


Q ss_pred             cCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                       .|+++.. + . .. ..++|.+++   ..++.++|.++||....-  ..+.+|+|++.++|++||++|+++|..
T Consensus       401 -~G~~~~~-~-~-~f-~~vt~~~~~---~~~v~~~L~~~gI~l~~~--~~~~lrvs~~e~~T~edId~L~~~l~~  465 (993)
T PLN02414        401 -LGFQVQS-L-P-FF-DTVKVKCSD---ADAIADAAAKVGINLRVV--DANTVTVSFDETTTLEDVDKLFKVFAG  465 (993)
T ss_pred             -cCCccCC-C-C-Cc-CeEEEecCC---HHHHHHHHHHCCCeeEEe--cCCeEEEEeeccCCHHHHHHHHHHHcc
Confidence             7887753 2 2 23 367788753   347999999999975431  134699999999999999999999963

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.85  E-value=3e-19  Score=176.44  Aligned_cols=301  Identities=12%  Similarity=0.079  Sum_probs=202.3

Q ss_pred             CCceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC---CCCCcEEEEEeCcH
Q 043610           69 DRVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN---IPQEYSVLFLQGGA  143 (430)
Q Consensus        69 ~~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g---~~~~~~vv~~~~ga  143 (430)
                      +.++.++.  .+.++|+.+++++.+.+...    .    .+++...   ...++|+.++++++   .+++ +|++ ++|+
T Consensus        19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~----~----~~~Y~~~---~~~~Lr~aia~~~~~~~~~~~-~i~i-t~Ga   85 (335)
T PRK14808         19 RDRTYLALNENPFPFPEDLVDEVFRRLNSD----T----LRIYYDS---PDEELIEKILSYLDTDFLSKN-NVSV-GNGA   85 (335)
T ss_pred             CceeEecCCCCCCCCCHHHHHHHHHHhhhh----h----hhcCCCC---ChHHHHHHHHHHhCCCCCCcc-eEEE-cCCH
Confidence            45555554  45778899999998876420    0    1111111   14478888999988   6665 7776 5889


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCcc
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHG  222 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG  222 (430)
                      ++++..++..+    |+|++..+++..+.  ..++..| ++..++..+   .+ .++.+  .+ .+++++++++++||||
T Consensus        86 ~~~i~~~~~~~----d~v~v~~P~y~~~~--~~~~~~g~~~~~v~~~~---~~-~~~~~--~~-~~~~~i~i~nP~NPTG  152 (335)
T PRK14808         86 DEIIYVMMLMF----DRSVFFPPTYSCYR--IFAKAVGAKFLEVPLTK---DL-RIPEV--NV-GEGDVVFIPNPNNPTG  152 (335)
T ss_pred             HHHHHHHHHHh----CcEEECCCCHHHHH--HHHHHcCCeEEEecCCC---cC-CCChh--Hc-cCCCEEEEeCCCCCCC
Confidence            99999988876    67877766655543  3566678 777777643   12 22211  12 3578999999999999


Q ss_pred             ccCC--CCccccCCCcEEEEeccCc-CCCCc-cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccc
Q 043610          223 VEFK--EYPSAKNSTGILVADMSSN-FCSKP-VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLML  293 (430)
Q Consensus       223 ~~~p--ei~~~~~~g~~lvvD~a~s-~G~~~-id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~  293 (430)
                      ..++  ++.++.++++++++|+++. +.... .. +...+  +++.|++|.+|.+|  +||++.++++++.+....    
T Consensus       153 ~~~s~~~l~~l~~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~----  228 (335)
T PRK14808        153 HVFEREEIERILKTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVR----  228 (335)
T ss_pred             CCcCHHHHHHHHhcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhc----
Confidence            9999  6666656789999999865 32111 12 22333  78899999999889  899999998887653211    


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                                ...+.+.+.+.++..+++...   -+++..++..+.++++++.|++ .|+++.+  +  .++ .+.+.++
T Consensus       229 ----------~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~r~~l~~~L~~-~g~~~~~--~--~g~-f~~~~l~  289 (335)
T PRK14808        229 ----------LPFNVSYVSQMFAKVALDHRE---IFEERTKFIVEERERMKSALRE-MGYRITD--S--RGN-FVFIFME  289 (335)
T ss_pred             ----------CCCCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHHHHHHHHHH-CCCEECC--C--CCe-EEEEeCC
Confidence                      012345566677777775321   2345556666778889999986 6876553  1  232 3455666


Q ss_pred             CCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          374 KSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       374 ~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +. ...++.++|.++||.+..   ...++|||++   +.+++++++++|+++
T Consensus       290 ~~-~~~~~~~~l~~~Gi~V~~---~~~~~Risi~---~~~~~~~~~~~l~~~  334 (335)
T PRK14808        290 KE-EKERLLEHLRAKNIAVRS---FREGVRITIG---KREENDMILKELEVF  334 (335)
T ss_pred             Cc-cHHHHHHHHHHCCeEEEE---CCCCeEEecC---CHHHHHHHHHHHHhh
Confidence            32 224788899999998863   2357999998   689999999999865

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.85  E-value=8.9e-19  Score=176.95  Aligned_cols=326  Identities=14%  Similarity=0.158  Sum_probs=206.3

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCcEEEEEe
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEYSVLFLQ  140 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~~vv~~~  140 (430)
                      +.+++|+.|-  .++++.+.+++.+.+.+... ....+...   .    -+.++|+.++++++      ++++ +|+++ 
T Consensus        33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~-~~~~y~~~---~----g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t-  102 (394)
T PRK06836         33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDP-GLHGYMPN---A----GYPEVREAIAESLNRRFGTPLTAD-HIVMT-  102 (394)
T ss_pred             CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCc-CcccCCCC---C----CCHHHHHHHHHHHHHHhCCCCCcC-cEEEe-
Confidence            4456665543  24578899988776643211 11111111   1    12345556666553      3454 67765 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      +|+++++..++.+++.+||.|++..+.+..+  ...++..| +++.++..++   +..+|+++++  +++++++|+++++
T Consensus       103 ~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~--~~~~~~~g~~v~~v~~~~~---~~~~d~~~l~~~~~~~~~~v~~~~p  177 (394)
T PRK06836        103 CGAAGALNVALKAILNPGDEVIVFAPYFVEY--RFYVDNHGGKLVVVPTDTD---TFQPDLDALEAAITPKTKAVIINSP  177 (394)
T ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCccH--HHHHHHcCCEEEEEecCCc---cCcCCHHHHHhhcCcCceEEEEeCC
Confidence            7899999999999999999999877655443  34566778 8888877532   1247888887  6789999999999


Q ss_pred             CCCccccCC--CCc---cc-cC------CCcEEEEeccCcC---CCCc-cc-cccc--cEEEeCCCccccCCc--cEEEE
Q 043610          218 ETIHGVEFK--EYP---SA-KN------STGILVADMSSNF---CSKP-VD-VTRF--GVIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       218 ~t~tG~~~p--ei~---~~-~~------~g~~lvvD~a~s~---G~~~-id-l~~~--d~~~~s~~K~~gp~G--~g~l~  276 (430)
                      +||||..+|  ++.   ++ ++      +|+++++|+++..   ...+ .. ++.+  .+++.|++|.+|.+|  +|+++
T Consensus       178 ~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~  257 (394)
T PRK06836        178 NNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIA  257 (394)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEe
Confidence            999999999  444   43 34      7999999998752   2111 11 2223  378899999999778  89999


Q ss_pred             EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      ++++..+... .......+   ... ......+...+.++...++.     +  ...+++++.++.+.+.|++ .|+.+.
T Consensus       258 ~~~~~~~~~~-~~~~~~~~---~~~-~~~~~~~~~~q~~~~~~l~~-----~--~~~~~~~~~r~~l~~~L~~-~g~~~~  324 (394)
T PRK06836        258 VNPEMEDADD-LVAALVFA---NRI-LGFVNAPALMQRVVAKCLDA-----T--VDVSIYKRNRDLLYDGLTE-LGFECV  324 (394)
T ss_pred             cCHHHhhhHH-HHHHHHHH---hhc-cccccCCHHHHHHHHHHhCC-----h--HHHHHHHHHHHHHHHHHHh-CCCEee
Confidence            9877633210 00000000   000 00112344455555544432     1  1245667778888889986 577654


Q ss_pred             CCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          357 PVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      +  +  .....+.+.++. ....++.+.|.++||.+.+|..  ..+++||+++  .++++++..++.|++++++.
T Consensus       325 ~--~--~gg~~~~~~~~~-~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~~  392 (394)
T PRK06836        325 K--P--QGAFYLFPKSPE-EDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKEY  392 (394)
T ss_pred             c--C--CceEEEEEeCCC-CCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence            2  1  122344455654 2234788889999999888753  2468999998  37999999999999988764

>PRK09148 aminotransferase; Validated

Probab=99.85  E-value=6.5e-19  Score=178.58  Aligned_cols=329  Identities=12%  Similarity=0.087  Sum_probs=209.4

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT  144 (430)
                      +.++.|+.|-  .++|+.+++++.+.+.+..   ...|..   .....++.+.+.+.+.+.+|.  +++.+|++ ++|++
T Consensus        30 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~~I~i-t~G~~  102 (405)
T PRK09148         30 ADIIDLGMGNPDLPTPQHIVDKLCETAQDPR---THRYSA---SKGIPGLRRAQAAYYARRFGVKLNPDTQVVA-TLGSK  102 (405)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHcCcc---cCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE-cCChH
Confidence            3456666543  2456788888877653210   001110   111233334444555444464  34325665 57899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcccc-c-cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDAL-E-QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l-~-i~~~~~lv~i~~~~t~t  221 (430)
                      +++..++..++.+||+|++..++++.+.  ..++..| ++..++...+  .+...++++. + ..+++++|++++++|||
T Consensus       103 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~~~~~~g~~v~~v~~~~~--~~~~~~l~~~~~~~~~~~~~v~l~~P~NPt  178 (405)
T PRK09148        103 EGFANMAQAITAPGDVILCPNPSYPIHA--FGFIMAGGVIRSVPAEPD--EEFFPALERAVRHSIPKPIALIVNYPSNPT  178 (405)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcccH--HHHHhcCCEEEEEeCCCC--CCCccCHHHHHhhccccceEEEEeCCCCCC
Confidence            9999999999999999998877766542  2345667 7777776532  1123333332 2 35789999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcC---CCCcc----ccccc-c--EEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNF---CSKPV----DVTRF-G--VIYAGAQKNVGPSG--VTIVIVRKDLLG  283 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~---G~~~i----dl~~~-d--~~~~s~~K~~gp~G--~g~l~v~~~~~~  283 (430)
                      |..++  +   |.++ +++|+++++|+++..   ...+.    .+... +  +++.|++|.+|.+|  +|+++.++++++
T Consensus       179 G~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~  258 (405)
T PRK09148        179 AYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIA  258 (405)
T ss_pred             CcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHH
Confidence            99999  3   4443 578999999998753   21111    12221 3  56899999999889  999999998887


Q ss_pred             ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      .+..... +           ...+++.+.+.++..+|+.-  ...++.+++++++.++++.+.|++ .|+.+..  + . 
T Consensus       259 ~l~~~~~-~-----------~~~~~~~~~q~~~~~~L~~~--~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~--p-~-  319 (405)
T PRK09148        259 ALTRVKS-Y-----------LDYGAFTPIQVAATAALNGP--QDCIAEMRELYKKRRDVLVESFGR-AGWDIPP--P-A-  319 (405)
T ss_pred             HHHHHHH-H-----------hccCCChHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHH-cCCccCC--C-C-
Confidence            6532110 0           11234556666666666521  124577788889999999999986 6765431  1 1 


Q ss_pred             ccceEEEEcCCC--ch-hHHHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          364 SFMNVPFTLEKS--DL-EAEFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       364 s~~iv~f~~~~~--~~-~~~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ....+.+.+++.  .. +.++.+.| +++||.+.+|..    ..+++||++.  .+.+.+++.++.|++++.+|
T Consensus       320 ~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~  391 (405)
T PRK09148        320 ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSA  391 (405)
T ss_pred             eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence            222344566531  11 23687776 468999988742    2458999997  46888999999998888765

>PLN02231 alanine transaminase

Probab=99.85  E-value=6.8e-19  Score=183.26  Aligned_cols=334  Identities=12%  Similarity=0.111  Sum_probs=206.4

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT  144 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT  144 (430)
                      ..+..+++.+|+...|..+++++.+.+.+..+.....|..   +....++.+.+.+.+.+..|.  +++ +|++ ++|++
T Consensus       127 ~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~---s~G~~~lReaIA~~~~~r~g~~~~pe-~I~i-T~Ga~  201 (534)
T PLN02231        127 DHPSLLDKSETHGLFSADAIERAWQILDQIPGRATGAYSH---SQGIKGLRDAIAAGIEARDGFPADPN-DIFL-TDGAS  201 (534)
T ss_pred             cCCccCCCCCccccCCHHHHHHHHHHHHhcCCccccCcCC---CCCcHHHHHHHHHHHHhccCCCCCcc-cEEE-eCCHH
Confidence            3456788888888889899998887665321111111211   122333333444444444454  344 6665 58899


Q ss_pred             HHHHHHHhhcC-CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEE
Q 043610          145 TQFAAVPLNLC-TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHI  214 (430)
Q Consensus       145 ~a~~~~~~sl~-~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i  214 (430)
                      +|+..++..++ .+||.|++..+.|..+.  ..++..| +++.++..+++.|+  +|+++|+  +.+      ++|++++
T Consensus       202 ~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~--~~~~~~g~~~v~~~l~~~~~~~--~d~~~Le~~l~~~~~~~~~~k~ivl  277 (534)
T PLN02231        202 PAVHMMMQLLIRSEKDGILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWG--LEISELKKQLEDARSKGITVRALVV  277 (534)
T ss_pred             HHHHHHHHHhccCCCCEEEEeCCCChhHH--HHHHHcCCEEEEEecCcccCCC--CCHHHHHHHHHHHhhcCCCeEEEEE
Confidence            99999999987 47999998887766543  2345567 77777775433354  7888886  432      6899999


Q ss_pred             eecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC----CCCc-cccc---------ccc---EEEeCCCccc-cCC
Q 043610          215 CANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF----CSKP-VDVT---------RFG---VIYAGAQKNV-GPS  270 (430)
Q Consensus       215 ~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~----G~~~-idl~---------~~d---~~~~s~~K~~-gp~  270 (430)
                      ++++||||.+++  +   |.++ +++|++++.|+++.-    +..+ ..+.         .-+   +++.|++|.+ |.+
T Consensus       278 ~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~p  357 (534)
T PLN02231        278 INPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGEC  357 (534)
T ss_pred             eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCC
Confidence            999999999999  3   4443 589999999998642    1111 1111         112   5668999976 778


Q ss_pred             c--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH-------HHHH-hcCHHHHHHHHH
Q 043610          271 G--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE-------YLLE-LGGLNEVEKMNR  337 (430)
Q Consensus       271 G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~-------~l~~-~~g~~~v~~~~~  337 (430)
                      |  +||+.+   ++++++.+.+..          .   ...++++..+.++..+++       .+.+ ....+.+++.++
T Consensus       358 GlRiGy~~~~~~~~~l~~~l~k~~----------~---~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~  424 (534)
T PLN02231        358 GKRGGYMEVTGFTSDVREQIYKVA----------S---VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLA  424 (534)
T ss_pred             ccceEEEEEecCCHHHHHHHHHHH----------h---hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHH
Confidence            8  888876   577776543210          0   112345566666666662       1110 001345678899


Q ss_pred             HHHHHHHHHHHccCCceecCCCCCCCccceEE--EEcCCCch----------hHHHHHHH-HHcCCeecCCCCC---CC-
Q 043610          338 KKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP--FTLEKSDL----------EAEFVKEA-AKEKMVQLKGHRS---VG-  400 (430)
Q Consensus       338 ~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~--f~~~~~~~----------~~~~~~~L-~~~Gi~~~~g~~~---~g-  400 (430)
                      ++++.+.+.|.+..|+.+.+.+    +.+.+.  +.++....          +..++.+| .++||.+.+|...   .| 
T Consensus       425 ~r~~~l~~~L~~~~gi~~~~p~----Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~  500 (534)
T PLN02231        425 RRAKTLEDALNSLEGVTCNKAE----GAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGT  500 (534)
T ss_pred             HHHHHHHHHHhcCCCceecCCC----eeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCC
Confidence            9999999999875577765311    222222  22232100          11345555 5679999987532   22 


Q ss_pred             -eeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          401 -GMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       401 -~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       .+|+++.  .++++++..++.|++++++
T Consensus       501 ~~~Rit~~--~~~e~l~eal~RL~~~~~~  527 (534)
T PLN02231        501 WHFRCTIL--PQEDKIPAIVSRLTEFHKS  527 (534)
T ss_pred             CeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence             5999985  4777777777766666543

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.84  E-value=2e-19  Score=183.79  Aligned_cols=281  Identities=11%  Similarity=0.053  Sum_probs=193.7

Q ss_pred             HHHHHHHHHhCC--CCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC
Q 043610          119 KAESDLRALLNI--PQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT  195 (430)
Q Consensus       119 ~~r~~la~l~g~--~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g  195 (430)
                      ++|+.++++++.  .++.+|+++ +|+++++..++..+++|||.|++..++++.+  ...++..| +++.++..+   .|
T Consensus       125 ~lr~~ia~~~~~~~~~~~~Iiit-~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~~~---~g  198 (431)
T PRK15481        125 ELHAWAARWLRDDCPVAFEIDLT-SGAIDAIERLLCAHLLPGDSVAVEDPCFLSS--INMLRYAGFSASPVSVDA---EG  198 (431)
T ss_pred             HHHHHHHHHHhhccCCcCeEEEe-cCcHHHHHHHHHHhCCCCCEEEEeCCCcHHH--HHHHHHcCCeEEeeccCC---CC
Confidence            455566666652  222267664 7899999999999999999999888776654  24566678 887787742   33


Q ss_pred             CCCCccccc--cCCCccEEEEe-ecCCCccccCC-----CCccc-cCC-CcEEEEeccCcCCCC-c-cc-cc-ccc--EE
Q 043610          196 KIPNFDALE--QNPDAKYLHIC-ANETIHGVEFK-----EYPSA-KNS-TGILVADMSSNFCSK-P-VD-VT-RFG--VI  259 (430)
Q Consensus       196 ~~~d~~~l~--i~~~~~lv~i~-~~~t~tG~~~p-----ei~~~-~~~-g~~lvvD~a~s~G~~-~-id-l~-~~d--~~  259 (430)
                        +|+++++  +++++++++++ +++||||..++     +|.++ +++ +++++.|++++.-.. + .. +. +.+  ++
T Consensus       199 --~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~  276 (431)
T PRK15481        199 --MQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWAL  276 (431)
T ss_pred             --CCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEE
Confidence              6778886  56788998887 99999999999     34554 466 999999998752110 0 11 11 112  78


Q ss_pred             EeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610          260 YAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR  337 (430)
Q Consensus       260 ~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~  337 (430)
                      +.|++|.+| +|  +||++.++++++.+.....            ......+.+.+.++..+|+.-.-..-++..++.++
T Consensus       277 ~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~------------~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~  343 (431)
T PRK15481        277 IRSVSKALG-PDLRLAFVASDSATSARLRLRLN------------SGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYA  343 (431)
T ss_pred             EeeeccccC-CCceeEEEeCCHHHHHHHHHHHh------------ccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHH
Confidence            899999999 68  8999998888776421100            01123566777888777752100012567888899


Q ss_pred             HHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC-----CCeeEEeecCCCCH
Q 043610          338 KKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS-----VGGMRASIYNAMPL  412 (430)
Q Consensus       338 ~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~-----~g~iRis~~~~~t~  412 (430)
                      +.++.+.+.|++ .|+.+..  +  ....-+.+.+++  ...++.+.|.++||.+.+|...     .+++|||++. .++
T Consensus       344 ~~r~~~~~~L~~-~~~~~~~--p--~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~  415 (431)
T PRK15481        344 QRRQKLARALQQ-YGIAIPS--P--GDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LND  415 (431)
T ss_pred             HHHHHHHHHHHH-cCCcccc--C--CCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CCh
Confidence            999999999987 5765421  1  122334456653  2347888898999999887532     2479999985 458


Q ss_pred             HHHHHHHHHHHHHHHh
Q 043610          413 AGVEKLVAFMKDFQAK  428 (430)
Q Consensus       413 edv~~ll~~L~~~~~~  428 (430)
                      ++++++++.|++++.|
T Consensus       416 ~~i~~~~~~l~~~~~~  431 (431)
T PRK15481        416 AEINRLAADLHQALNR  431 (431)
T ss_pred             HHHHHHHHHHHHHhcC
Confidence            9999999999998764

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.84  E-value=2.2e-19  Score=177.22  Aligned_cols=269  Identities=13%  Similarity=0.048  Sum_probs=182.9

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT  195 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g  195 (430)
                      ..++|+.+++++|.+++ +|++ ++|+++++..++. ++++| .+++..+++..+  ...++..| ++..++...   ++
T Consensus        42 ~~~lr~~ia~~~~~~~~-~I~i-t~Gs~~~l~~~~~-~~~~~-~vv~~~P~y~~y--~~~~~~~G~~v~~vp~~~---~~  112 (332)
T PRK06425         42 YTDIEDQIKIYTQGLKI-KVLI-GPGLTHFIYRLLS-YINVG-NIIIVEPNFNEY--KGYAFTHGIRISALPFNL---IN  112 (332)
T ss_pred             HHHHHHHHHHHhCCCcc-eEEE-CCCHHHHHHHHHH-HhCCC-cEEEeCCChHHH--HHHHHHcCCeEEEEeCCc---cc
Confidence            45888999999999886 6665 5889999999886 56776 566666665543  34567778 888887642   22


Q ss_pred             CCCCccccccCCCccEEEEeecCCCccccCC--CCcc---c-cCCCcEEEEeccCc-CC--CC-c-ccc-cccc--EEEe
Q 043610          196 KIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPS---A-KNSTGILVADMSSN-FC--SK-P-VDV-TRFG--VIYA  261 (430)
Q Consensus       196 ~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~---~-~~~g~~lvvD~a~s-~G--~~-~-idl-~~~d--~~~~  261 (430)
                        ++.+.++ ..++++|++|+++||||..++  ++.+   . +++|+++++|+++. +.  .. + ..+ ...+  +++.
T Consensus       113 --~~~~~l~-~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~  189 (332)
T PRK06425        113 --NNPEILN-NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGR  189 (332)
T ss_pred             --CcHHHHh-hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEe
Confidence              3433343 347899999999999999999  4444   3 47899999999865 22  11 1 111 2223  6779


Q ss_pred             CCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610          262 GAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK  339 (430)
Q Consensus       262 s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l  339 (430)
                      |++|.+|.+|  +||++.++++++.+....+              ..+.+.....++. ..+.   +.-++..++++++.
T Consensus       190 SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~--------------~~~~~~~~~~~l~-~~~~---~~~~~~~~~~~~~~  251 (332)
T PRK06425        190 SLTKILGIPSLRIGYIATDDYNMKISRKITE--------------PWSVCDPAIDFIR-SIDL---DYVAKHSLDIMENE  251 (332)
T ss_pred             ecHHhcCCchhhheeeecCHHHHHHHHHcCC--------------CCccCHHHHHHHH-Hhhh---HHHHHHHHHHHHHH
Confidence            9999999889  8999999998876543111              1122222222111 1111   11135678888899


Q ss_pred             HHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCHHHH
Q 043610          340 AELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPLAGV  415 (430)
Q Consensus       340 ~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv  415 (430)
                      ++++.+.|++ .|+....  ++ .+ .-+.+.+++   ..++.+.|.++||.+.+|...    .+++|||++   +.+++
T Consensus       252 r~~l~~~L~~-~g~~~~~--~~-~g-~f~~~~~~~---~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~---~~~~~  320 (332)
T PRK06425        252 RSYLINNLEA-MGFRAAG--DP-SA-NFITFMIPD---AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR---RRSFN  320 (332)
T ss_pred             HHHHHHHHHH-CCCEECC--CC-Cc-eEEEEEcCC---HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC---CHHHH
Confidence            9999999987 5776542  11 22 234455552   347999998999998876432    358999998   79999


Q ss_pred             HHHHHHHHHHH
Q 043610          416 EKLVAFMKDFQ  426 (430)
Q Consensus       416 ~~ll~~L~~~~  426 (430)
                      ++|+++|++++
T Consensus       321 ~~l~~al~~~~  331 (332)
T PRK06425        321 IKLVNALRNFL  331 (332)
T ss_pred             HHHHHHHHHHh
Confidence            99999999876

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.84  E-value=9.8e-19  Score=173.08  Aligned_cols=263  Identities=12%  Similarity=0.026  Sum_probs=180.3

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK  196 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~  196 (430)
                      .++++.+++++|.++..+|++ ++|+++++..+. .++++|| +++..+++..+.  ..++..| +++.++..    .  
T Consensus        56 ~~L~~~ia~~~~~~~~~~I~i-~~Gs~e~i~~l~-~~~~~g~-v~v~~P~y~~y~--~~~~~~g~~~~~v~~~----~--  124 (339)
T PRK06959         56 DGLAACAARYYGAPDAAHVLP-VAGSQAAIRALP-ALLPRGR-VGIAPLAYSEYA--PAFARHGHRVVPLDEA----A--  124 (339)
T ss_pred             HHHHHHHHHHhCCCCcccEEE-CcCHHHHHHHHH-HhcCCCe-EEEcCCCcHHHH--HHHHHCCCEEEeeccc----c--
Confidence            588899999999974227776 478999998764 4567776 766666555442  3455667 65555432    1  


Q ss_pred             CCCccccccCCCccEEEEeecCCCccccCC--CCccc----cCCCcEEEEeccCcCCCCccc---ccccc--EEEeCCCc
Q 043610          197 IPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA----KNSTGILVADMSSNFCSKPVD---VTRFG--VIYAGAQK  265 (430)
Q Consensus       197 ~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~----~~~g~~lvvD~a~s~G~~~id---l~~~d--~~~~s~~K  265 (430)
                          +.  +.+.++++++|+++||||.+++  ++.++    ++++.++++|+++.-......   +.+.+  +++.|++|
T Consensus       125 ----~~--~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK  198 (339)
T PRK06959        125 ----DT--LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGK  198 (339)
T ss_pred             ----hh--ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChh
Confidence                11  2235678999999999999999  55443    367899999998763321111   21223  78899999


Q ss_pred             cccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610          266 NVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       266 ~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l  343 (430)
                      .+|.+|  +||++.++++++.+....+              ..+.+...+.++..+|+.-   .-.+..++++++.++++
T Consensus       199 ~~gl~GlRiGy~v~~~~li~~l~~~~~--------------~~~vs~~~q~a~~~~L~~~---~~~~~~~~~~~~~r~~l  261 (339)
T PRK06959        199 FFGLAGVRAGFVLAAPALLAALRDALG--------------AWTVSGPARHAVRAAFADA---AWQAAMRERLAADGARL  261 (339)
T ss_pred             hcCCcchheEEEecCHHHHHHHHHhcC--------------CCCCcHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHH
Confidence            999889  8999999998877543211              1234556777777777531   13467788899999999


Q ss_pred             HHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          344 YNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       344 ~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      .+.|++ .|+.+..      .+..+.+.+++   ..++.+.|.++||.+.. ....+++|||+..  +++|+++++++|+
T Consensus       262 ~~~L~~-~g~~~~~------~~~f~~~~~~~---~~~l~~~l~~~GI~vr~-~~~~~~lRisi~~--~~~e~~~l~~al~  328 (339)
T PRK06959        262 AALLRA-HGFAVHA------TPLFSWTDDPR---AAALHAALARRGIWTRY-FAPPPSVRFGLPA--DEAEWQRLEDALA  328 (339)
T ss_pred             HHHHHH-CCCCccC------cceEEEEeCCC---HHHHHHHHHhCCeEEEE-CCCCCeEEEECCC--CHHHHHHHHHHHH
Confidence            999997 5765431      22222344432   23788999999999853 2234589999854  7889999999999


Q ss_pred             HHHH
Q 043610          424 DFQA  427 (430)
Q Consensus       424 ~~~~  427 (430)
                      ++++
T Consensus       329 ~~~~  332 (339)
T PRK06959        329 ECVP  332 (339)
T ss_pred             HHHH
Confidence            8765

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=99.84  E-value=7.8e-19  Score=166.93  Aligned_cols=323  Identities=15%  Similarity=0.146  Sum_probs=228.6

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC------CCcEEEEEeCcHHHHHHHHHh
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP------QEYSVLFLQGGATTQFAAVPL  152 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~------~~~~vv~~~~gaT~a~~~~~~  152 (430)
                      .+..+.+.+|+.+.+..-.++|+++      +..    +..+|+++|+|++-+      .+ +|++ ++|=++|++.++.
T Consensus        77 ~~ts~~a~~Av~~al~Sgk~N~Yap------s~G----~~~AR~AVAeYl~~~l~~kl~a~-DV~l-tsGC~qAIe~~i~  144 (447)
T KOG0259|consen   77 FRTSQEAEQAVVDALRSGKGNGYAP------SVG----ILPARRAVAEYLNRDLPNKLTAD-DVVL-TSGCSQAIELAIS  144 (447)
T ss_pred             ccCCHHHHHHHHHHHhcCCCCCcCC------ccc----cHHHHHHHHHHhhcCCCCccCcC-ceEE-eccchHHHHHHHH
Confidence            4567788889988876433333321      112    237889999997742      33 5665 5788999999999


Q ss_pred             hcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC---
Q 043610          153 NLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK---  226 (430)
Q Consensus       153 sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p---  226 (430)
                      ++.+||..|++..+|+.-+.  ..+...| +++....-.+++|  .+|++.++  ++++|.++++.+++||.|.++.   
T Consensus       145 ~LA~p~aNILlPrPGfp~Y~--~~a~~~~lEVR~ydlLPe~~w--eIDL~~veal~DENT~AivviNP~NPcGnVys~~H  220 (447)
T KOG0259|consen  145 SLANPGANILLPRPGFPLYD--TRAIYSGLEVRYYDLLPEKDW--EIDLDGVEALADENTVAIVVINPNNPCGNVYSEDH  220 (447)
T ss_pred             HhcCCCCceecCCCCCchHH--HhhhhcCceeEeecccCcccc--eechHHHHHhhccCeeEEEEeCCCCCCcccccHHH
Confidence            99999999999988865432  1344557 8888877554456  47888888  6899999999999999999999   


Q ss_pred             --CCccc-cCCCcEEEEeccCc---CCCCc-ccccccc-----EEEeCCCccccCCc--cEEEEEcHHH--HhccCCCCC
Q 043610          227 --EYPSA-KNSTGILVADMSSN---FCSKP-VDVTRFG-----VIYAGAQKNVGPSG--VTIVIVRKDL--LGNAQDKTP  290 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s---~G~~~-idl~~~d-----~~~~s~~K~~gp~G--~g~l~v~~~~--~~~~~~~~p  290 (430)
                        +|.+. ++.+++++.|+++.   ||..| +.+..+.     +..++-+|-+=.+|  +|++.+.+..  ...    .-
T Consensus       221 L~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~----~~  296 (447)
T KOG0259|consen  221 LKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRD----TK  296 (447)
T ss_pred             HHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccc----hH
Confidence              56665 69999999999974   67666 3565552     35578899887668  9999886432  111    00


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                       .+  ....+.-.....|++..+.|+..-|+...+ +-++....-++..++..+++|++.+++... ..|+.  .+-+.+
T Consensus       297 -~~--q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~-efF~k~~~~lk~na~l~y~~Lk~IP~l~cp-~kPeg--~mylmv  369 (447)
T KOG0259|consen  297 -VV--QGIKNFLDIIPGPATIIQGALPDILEKTPE-EFFDKKLSFLKSNADLCYSRLKDIPCLTCP-VKPEG--CMYLMV  369 (447)
T ss_pred             -HH--HHHHHHHhccCCccHhHHHHhHHHHHhChH-HHHHHHHHHHHhhHHHHHHHHhcCCCcccC-cCCCc--ceEEEe
Confidence             00  000111123346788888888888876553 467778888888999999999998887643 34432  232333


Q ss_pred             Ec-----CCCchhHHHHHHHH-HcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          371 TL-----EKSDLEAEFVKEAA-KEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       371 ~~-----~~~~~~~~~~~~L~-~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      .+     ++.+.+.+|+++|. ++.+++++|..  ..+++||++..  ..+.++...+.|++|..||+
T Consensus       370 ~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~--~~~~leea~~Rik~Fc~RH~  435 (447)
T KOG0259|consen  370 KLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV--EEEMLEEAFSRIKEFCDRHS  435 (447)
T ss_pred             ccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc--ChHHHHHHHHHHHHHHHhhh
Confidence            33     23233447999984 56999999864  36799999975  78889999999999999984

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.83  E-value=8.5e-19  Score=173.44  Aligned_cols=295  Identities=12%  Similarity=0.105  Sum_probs=196.7

Q ss_pred             CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      .|.++|+.+++++.+.+.+.   +     .+++..   .-..++|+.+++++|++++ +|++ ++|+++++..++..+  
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~---~-----~~~Y~~---~g~~~lr~~ia~~~~~~~~-~I~~-t~G~~~~l~~~~~~~--   92 (337)
T PRK03967         28 NPFDLPEELKEEIFEELKRV---P-----FNRYPH---ITSDPLREAIAEFYGLDAE-NIAV-GNGSDELISYLVKLF--   92 (337)
T ss_pred             CCCCCCHHHHHHHHHHhhcC---c-----cccCCC---CCHHHHHHHHHHHhCcCcc-eEEE-cCCHHHHHHHHHHHh--
Confidence            34567889999998876421   1     111111   1235788999999998876 7776 588999999877665  


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCccccCC--CCcccc
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHGVEFK--EYPSAK  232 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei~~~~  232 (430)
                      +||+|++..+++..+.  ..++..| +++.++..+  ++  .+|++.++ ..++++++++++++||||.+++  ++.++.
T Consensus        93 ~gd~V~v~~P~y~~~~--~~~~~~g~~~~~v~~~~--~~--~~d~~~l~~~~~~~~~v~~~~P~NPtG~~~~~~~l~~i~  166 (337)
T PRK03967         93 EGKHIVITPPTFGMYS--FYAKLNGIPVIDVPLKE--DF--TIDGERIAEKAKNASAVFICSPNNPTGNLQPEEEILKVL  166 (337)
T ss_pred             CCCeEEEeCCChHHHH--HHHHHcCCeEEEeecCC--CC--CcCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence            6999998776654332  3455667 777777643  23  36777776 4578899999999999999999  676664


Q ss_pred             CCCcEEEEeccCc-CCCCc-cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCC
Q 043610          233 NSTGILVADMSSN-FCSKP-VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLY  305 (430)
Q Consensus       233 ~~g~~lvvD~a~s-~G~~~-id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~  305 (430)
                      ++++++++|+++. +...+ .. ++..+  +++.|++|.+|.+|  +|++++++++++.+.....              .
T Consensus       167 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~--------------~  232 (337)
T PRK03967        167 ETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKP--------------P  232 (337)
T ss_pred             hcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcC--------------C
Confidence            5799999999875 22111 11 12223  67799999999888  9999999988876532111              1


Q ss_pred             CCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHH
Q 043610          306 NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA  385 (430)
Q Consensus       306 ~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L  385 (430)
                      .+.+...+.++..+|+...   -..+..++..+.++.+.+.|.+ .   ..+    ..+. .+.+.+       .+.+.|
T Consensus       233 ~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~r~~l~~~L~~-~---~~~----~~~~-~~~~~~-------~~~~~l  293 (337)
T PRK03967        233 FSLNILTMKIVRLALDHYD---LIEERIDYIIKERERVRRELGE-Y---AYP----SDAN-FLLLKL-------DAYDYL  293 (337)
T ss_pred             CCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHHHHHHHhcc-C---cCC----CCCc-EEEEhH-------HHHHHH
Confidence            2446677777777775321   1233344555666777777764 2   111    1122 122222       267788


Q ss_pred             HHcCCeecCCC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          386 AKEKMVQLKGH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       386 ~~~Gi~~~~g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++||.+.++. ...+++||+++   +.++.++++++|+++...
T Consensus       294 ~~~gi~v~~~~~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~  334 (337)
T PRK03967        294 LENGIVVRKLSGRLEGHIRVTVG---KREENDEFIKALKEIKEG  334 (337)
T ss_pred             HHCCEEEEeCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHh
Confidence            88999876432 23458999988   689999999999988654

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.83  E-value=4.7e-19  Score=183.29  Aligned_cols=286  Identities=16%  Similarity=0.090  Sum_probs=185.7

Q ss_pred             HHHHHHHHHHHhC----CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHH-HhC-CceEEecCC
Q 043610          117 IEKAESDLRALLN----IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQ-KFC-NPQVIWSGK  190 (430)
Q Consensus       117 ~~~~r~~la~l~g----~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~-~~g-~~~~v~~~~  190 (430)
                      .+.+.+.+.+.+|    ++++ +|++ ++|+++++..++..++.|||.|++..+.+.+..  ..++ +.| +++.++...
T Consensus       100 R~aiA~~l~~~~g~~v~v~pe-~Ivi-t~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~--~~~~~~~G~~vv~v~~~~  175 (496)
T PLN02376        100 RQAIAHFMGKARGGKVTFDPE-RVVM-SGGATGANETIMFCLADPGDVFLIPSPYYAAFD--RDLRWRTGVEIIPVPCSS  175 (496)
T ss_pred             HHHHHHHHHHHhCCCCcCChh-hEEE-ccchHHHHHHHHHHhCCCCCEEEECCCCccchH--HHHHhhCCCEEEEEeCCC
Confidence            3344455555545    5565 7776 589999999999999999999998776665542  2233 467 777777743


Q ss_pred             CCcCCCCCCccccc--------cCCCccEEEEeecCCCccccCC--CCcc---c-cCCCcEEEEeccCcCC---C-Cccc
Q 043610          191 AEKYTKIPNFDALE--------QNPDAKYLHICANETIHGVEFK--EYPS---A-KNSTGILVADMSSNFC---S-KPVD  252 (430)
Q Consensus       191 ~~~~g~~~d~~~l~--------i~~~~~lv~i~~~~t~tG~~~p--ei~~---~-~~~g~~lvvD~a~s~G---~-~~id  252 (430)
                      ++++  .+++++++        ...++|+|++++++||||.+++  ++.+   + +++|+++|+|++++.-   . ....
T Consensus       176 ~~~~--~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~s  253 (496)
T PLN02376        176 SDNF--KLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVS  253 (496)
T ss_pred             CccC--cCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCccc
Confidence            2223  36776663        1357899999999999999999  4443   3 4799999999997632   2 1111


Q ss_pred             ---c------cc--cc--EEEeCCCccccCCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHH
Q 043610          253 ---V------TR--FG--VIYAGAQKNVGPSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMC  316 (430)
Q Consensus       253 ---l------~~--~d--~~~~s~~K~~gp~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~  316 (430)
                         +      .+  .+  +++.|++|.+|.+|  +|+++..+ .+.+.+...              ...+..+...++++
T Consensus       254 i~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~--------------~~~~~vs~~~Q~a~  319 (496)
T PLN02376        254 VAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKM--------------SSFGLVSSQTQLML  319 (496)
T ss_pred             HHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHH--------------hhcCCCCHHHHHHH
Confidence               1      11  13  34789999999888  99999854 443332110              11134566677777


Q ss_pred             HHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC-----ch--hHHHHHHHHH-
Q 043610          317 GLVFEYLLE-LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS-----DL--EAEFVKEAAK-  387 (430)
Q Consensus       317 ~~al~~l~~-~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~-----~~--~~~~~~~L~~-  387 (430)
                      ...|+.-.- ..-+...++++++.++.+.+.|.+ .|+...+  +  .+..-+.+.++..     ..  +.++.+.|.+ 
T Consensus       320 ~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~-~gi~~~~--~--~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~  394 (496)
T PLN02376        320 ASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKK-ADIACLT--S--NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDK  394 (496)
T ss_pred             HHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCcccC--C--CceEEEEEEchhhhccCCchhHHHHHHHHHHHc
Confidence            766642110 012455677888888999999986 5766543  1  1222344556431     11  1357777755 


Q ss_pred             cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          388 EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       388 ~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .||.+.+|..    ..|++||++.. .++++++..++.|++++.+
T Consensus       395 ~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~  438 (496)
T PLN02376        395 VKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSK  438 (496)
T ss_pred             CCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence            5999988753    25689999984 4578888888888887754

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.83  E-value=3.2e-18  Score=172.53  Aligned_cols=314  Identities=10%  Similarity=0.063  Sum_probs=202.3

Q ss_pred             CcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCC
Q 043610           81 LPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd  159 (430)
                      ..|.+++++.+.+.+|. +.+.|.   .+++.  ....+++++.+++++|.++  .++ ++ +|+.++..++.+++++||
T Consensus        13 ~~~~~~~~~~~a~~~~g~~~~~sr---~~yg~--~~~~~~LE~~lA~~~g~e~--al~-~~-sG~~a~~~~i~~l~~~GD   83 (392)
T PLN03227         13 SSPTLRQTALESLSHYGCGSCGPR---GFYGT--IDAHLELEQCMAEFLGTES--AIL-YS-DGASTTSSTVAAFAKRGD   83 (392)
T ss_pred             CCHHHHHHHHHHHHHhCCCCcccc---cccCC--hHHHHHHHHHHHHHhCCCc--EEE-ec-CcHHHHHHHHHHhCCCCC
Confidence            45689999888887653 222222   22221  2368899999999999974  444 43 456666688888899999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcccc-c-c-----------CCCccEEEEeecCCCccccC
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDAL-E-Q-----------NPDAKYLHICANETIHGVEF  225 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l-~-i-----------~~~~~lv~i~~~~t~tG~~~  225 (430)
                      +|++.+..|.+..  ...+..+ +++.++..+      ..+++.+ + +           .+++++|++..+.+++|.+.
T Consensus        84 ~Vl~~~~~h~s~~--~~~~l~~~~~~~~~~~d------~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~  155 (392)
T PLN03227         84 LLVVDRGVNEALL--VGVSLSRANVRWFRHND------MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA  155 (392)
T ss_pred             EEEEeccccHHHH--HHHHHcCCeEEEeCCCC------HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc
Confidence            9998776665542  1122223 333333211      1122221 1 2           24688999998999999999


Q ss_pred             C--CCccc-cCCCcEEEEeccCcCCCCc---------cc---cccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCC
Q 043610          226 K--EYPSA-KNSTGILVADMSSNFCSKP---------VD---VTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTP  290 (430)
Q Consensus       226 p--ei~~~-~~~g~~lvvD~a~s~G~~~---------id---l~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p  290 (430)
                      |  +|.++ +++|+++++|++|++|..-         ++   ....|+++.|.+|.+||.| |++..++++++.....  
T Consensus       156 ~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g-g~v~~~~~~~~~~~~~--  232 (392)
T PLN03227        156 PLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG-GMTVGSEEVVDHQRLS--  232 (392)
T ss_pred             CHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC-cEEecCHHHHHHHHHh--
Confidence            9  77776 6899999999999876431         11   2345899999999999887 7777888876543210  


Q ss_pred             ccccccchhhcCCCCCC-ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecC-------CCCCC
Q 043610          291 LMLDYKIHDENNSLYNT-PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP-------VEKSV  362 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T-~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~-------~~~~~  362 (430)
                               ..+.++++ .+....+++.++++.+.+   .+++.++..++.+++++.|++ .++..+.       .....
T Consensus       233 ---------~~~~~~~~~~~p~~~~aa~~al~~~~~---~~~~~~~l~~~~~~l~~~L~~-~~~~~~~~~rg~~~~~~~~  299 (392)
T PLN03227        233 ---------GSGYCFSASAPPFLAKADATATAGELA---GPQLLNRLHDSIANLYSTLTN-SSHPYALKLRNRLVITSDP  299 (392)
T ss_pred             ---------CcCccccCCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHh-cCCccccccccccccCCCC
Confidence                     01122232 233445555566655442   257788899999999999985 4443210       00111


Q ss_pred             CccceEEEEcCCCch---------hHHHHHHHHHcCCeecC-C------C--CCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDL---------EAEFVKEAAKEKMVQLK-G------H--RSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       363 rs~~iv~f~~~~~~~---------~~~~~~~L~~~Gi~~~~-g------~--~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      .++ ++.+.+.+...         ..++.++|.++|+.+.. +      .  .....+|++++..+|+|||+++++.|++
T Consensus       300 ~~~-i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~  378 (392)
T PLN03227        300 ISP-IIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGE  378 (392)
T ss_pred             CCC-EEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            243 56677653111         12678888899998742 2      1  1234699999999999999999999999


Q ss_pred             HHHh
Q 043610          425 FQAK  428 (430)
Q Consensus       425 ~~~~  428 (430)
                      .+++
T Consensus       379 ~~~~  382 (392)
T PLN03227        379 AVEA  382 (392)
T ss_pred             HHHH
Confidence            8764

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=99.83  E-value=2e-19  Score=173.71  Aligned_cols=322  Identities=16%  Similarity=0.130  Sum_probs=205.6

Q ss_pred             ecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHHHHHH
Q 043610           74 FAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        74 ~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~a~~~  149 (430)
                      ++.|-  .+.|+-|.+++++.....   ....   ..++....++.+.+++.+++++|.  .++++|++ |.|+.+++..
T Consensus        36 LgqGfp~~~~P~fv~ea~~~~~~~~---~~~q---Yt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlV-T~GA~~ai~~  108 (420)
T KOG0257|consen   36 LGQGFPDFPPPKFVTEAAKNAAKEP---STNQ---YTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLV-TAGANEAISS  108 (420)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHhccc---hhcc---ccccCCchHHHHHHHHHHHHHhccccCCcccEEE-ecCchHHHHH
Confidence            66665  578899999999877532   1111   112334456677888888888885  23337776 5789999999


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCC------CCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGK------AEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~------~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      .++.++++||+|+++++-+..+  ....+-.| .+++++...      ...|  .+|.++++  ++++||+|++|.++||
T Consensus       109 ~~~~l~~~GDeVii~eP~fd~Y--~~~~~maG~tpv~v~~~~~~g~~~s~~~--~~D~~~le~~~t~kTk~Ii~ntPhNP  184 (420)
T KOG0257|consen  109 ALLGLLNPGDEVIVFEPFFDCY--IPQVVMAGGTPVFVPLKPKEGNVSSSDW--TLDPEELESKITEKTKAIILNTPHNP  184 (420)
T ss_pred             HHHHHcCCCCEEEEecCcchhh--hhHHhhcCCcceeeccccccccccCccc--cCChHHHHhhccCCccEEEEeCCCCC
Confidence            9999999999999998765544  22344446 888887651      1122  46777887  8999999999999999


Q ss_pred             ccccCC--C---Cccc-cCCCcEEEEeccCcCCCC----cccc------ccccEEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          221 HGVEFK--E---YPSA-KNSTGILVADMSSNFCSK----PVDV------TRFGVIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~idl------~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      ||.+++  +   |+++ +++|.+++.|+++.+-..    .+.+      .+.-+-++|+.|.+|.+|  +|+++..+.++
T Consensus       185 tGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~  264 (420)
T KOG0257|consen  185 TGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLY  264 (420)
T ss_pred             cCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhh
Confidence            999999  3   5665 699999999998754321    1222      122378999999999999  99999955554


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH---Hhc--C-HHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL---ELG--G-LNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~---~~~--g-~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      ....+.          ..  ....+.+++.+.|...|++.-+   ..+  + ++.+.+.+++.++.|.+.|.+ .|+++.
T Consensus       265 ~~~~~v----------h~--~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~-lg~~v~  331 (420)
T KOG0257|consen  265 SALFPV----------HQ--NFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEE-LGLKVT  331 (420)
T ss_pred             hhHHHH----------hh--ccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHh-cCCccc
Confidence            432210          01  1123556666666666665322   012  2 344888999999999999997 698876


Q ss_pred             CCCCCCCccceEEEEcCCC-----c-----hhHHHHHHH-HHcCCeecCCCC--C-------CCeeEEeecCCCCHHHHH
Q 043610          357 PVEKSVRSFMNVPFTLEKS-----D-----LEAEFVKEA-AKEKMVQLKGHR--S-------VGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~~~-----~-----~~~~~~~~L-~~~Gi~~~~g~~--~-------~g~iRis~~~~~t~edv~  416 (430)
                      ..+.....  .+-|.++..     +     .+..+...| .+.|+...++..  +       .+.+|+.+.-  +++-++
T Consensus       332 ~p~gayyl--~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k--~~~~L~  407 (420)
T KOG0257|consen  332 GPEGAYYL--WADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK--ADETLR  407 (420)
T ss_pred             cCCCceEE--EEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHh--hHHHHH
Confidence            53332221  111221110     0     122456655 345776655321  1       1235555542  556666


Q ss_pred             HHHHHHH
Q 043610          417 KLVAFMK  423 (430)
Q Consensus       417 ~ll~~L~  423 (430)
                      ..++.|+
T Consensus       408 ~a~e~l~  414 (420)
T KOG0257|consen  408 KAIERLK  414 (420)
T ss_pred             HHHHHHh
Confidence            6666666

>PRK06855 aminotransferase; Validated

Probab=99.83  E-value=2.6e-18  Score=175.60  Aligned_cols=333  Identities=13%  Similarity=0.090  Sum_probs=203.5

Q ss_pred             CCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeC
Q 043610           69 DRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQG  141 (430)
Q Consensus        69 ~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~  141 (430)
                      ..++.++-|-     .++|+.+.+++.+.+.+....+.   ..   .....++.+.+.+.+++..|  ++++ +|++ ++
T Consensus        32 ~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y---~~---~~G~~~LReaia~~~~~~~g~~~~~~-~I~i-t~  103 (433)
T PRK06855         32 VKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGY---CP---TKGVLETREFLAELNNKRGGAQITPD-DIIF-FN  103 (433)
T ss_pred             ccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCC---CC---CCCCHHHHHHHHHHHHhccCCCCCHh-HEEE-cC
Confidence            3455555443     36788888888776532100111   11   11223333344444444445  4554 6776 57


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCccEEEEee
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICA  216 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~  216 (430)
                      |+++++..++. ++.|||.|++..+.|+++... .....| +++.++..++.+|  .+|+++++  +.  ++++++++++
T Consensus       104 G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~-~~~~~g~~~v~v~~~~~~~~--~~d~~~l~~~~~~~~~~~~i~l~~  179 (433)
T PRK06855        104 GLGDAIAKIYG-LLRREARVIGPSPAYSTHSSA-EAAHAGYPPVTYRLDPENNW--YPDLDDLENKVKYNPSIAGILLIN  179 (433)
T ss_pred             cHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHH-HHHhcCCeEEEEecccccCC--CCCHHHHHHHHhcCCCceEEEEEC
Confidence            89999998874 789999999888776654211 122335 6666766432223  47888887  43  5789999999


Q ss_pred             cCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---C-Cccccc----cc-cEEEeCCCccccCCc--cEEEEEc-
Q 043610          217 NETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---S-KPVDVT----RF-GVIYAGAQKNVGPSG--VTIVIVR-  278 (430)
Q Consensus       217 ~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~-~~idl~----~~-d~~~~s~~K~~gp~G--~g~l~v~-  278 (430)
                      ++||||.+++  +   |.++ +++|++++.|++++--   . .+..+.    +. .+++.|++|.++.+|  +||+++. 
T Consensus       180 P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~  259 (433)
T PRK06855        180 PDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYN  259 (433)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeC
Confidence            9999999999  3   4443 5899999999987522   1 111221    11 278899999999889  8998873 


Q ss_pred             ----HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCce
Q 043610          279 ----KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY  354 (430)
Q Consensus       279 ----~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~  354 (430)
                          +.+.+.+..    ....     . ....+++.+.+.++..+|+.-.-+..+++++++++++++.+.+.|.+..|+.
T Consensus       260 ~~~~~~~~~~~~~----~~~~-----~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~  329 (433)
T PRK06855        260 ADKDEVFKKYINS----ILNA-----K-MIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK  329 (433)
T ss_pred             CchhhHHHHHHHH----HHHh-----h-ccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence                211111110    0000     0 0112456677888877774210011367788888999999999998644655


Q ss_pred             ecCCCCCCCccceEEEEcCCCc---------------------------hhHHHHHH-HHHcCCeecCCCCC---CCeeE
Q 043610          355 KCPVEKSVRSFMNVPFTLEKSD---------------------------LEAEFVKE-AAKEKMVQLKGHRS---VGGMR  403 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~~~---------------------------~~~~~~~~-L~~~Gi~~~~g~~~---~g~iR  403 (430)
                      +..  +  .+...+.+.+++..                           .+.+++.. +.++||.+.+|...   ..++|
T Consensus       330 ~~~--p--~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~R  405 (433)
T PRK06855        330 VNR--T--NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFR  405 (433)
T ss_pred             ccC--C--CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceE
Confidence            432  1  12233445565310                           12256655 56789999888543   23599


Q ss_pred             EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          404 ASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       404 is~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ||+.. .+++++++.++.|+++++.
T Consensus       406 ls~~~-~~~~~i~~~~~~l~~~~~~  429 (433)
T PRK06855        406 VTLLE-RDEEKFEWIYQTLAEKIEE  429 (433)
T ss_pred             EEECC-CcHHHHHHHHHHHHHHHHH
Confidence            99986 4688898888888887753

>PRK10534 L-threonine aldolase; Provisional

Probab=99.83  E-value=7.8e-19  Score=173.26  Aligned_cols=300  Identities=12%  Similarity=0.056  Sum_probs=185.6

Q ss_pred             cCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc
Q 043610           75 AAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL  154 (430)
Q Consensus        75 ~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl  154 (430)
                      +.+|. +++.+++++.+....          ...++++  ....++++.|++++|.++   ++++ +|+++++...+..+
T Consensus         7 ~~~~~-p~~~~~~a~~~~~~~----------~~~Y~~~--~~~~~L~~~la~~~g~~~---~~v~-~~g~~a~~~~l~~~   69 (333)
T PRK10534          7 DTVTR-PSRAMLEAMMAAPVG----------DDVYGDD--PTVNALQDYAAELSGKEA---ALFL-PTGTQANLVALLSH   69 (333)
T ss_pred             ccCCC-CCHHHHHHHHhccCC----------CcccCCC--HHHHHHHHHHHHHhCCCe---EEEe-CchHHHHHHHHHHh
Confidence            34555 678999998764321          1122211  234588899999999975   3454 56788888777777


Q ss_pred             CCCCCcEEEEeCChh-HHHHHHHHHHhC--CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEeecCCCccc
Q 043610          155 CTPNDPVDYIVTGSW-GDKAFKEAQKFC--NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHICANETIHGV  223 (430)
Q Consensus       155 ~~~gd~vl~~~~g~~-~~~~~~~a~~~g--~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~tG~  223 (430)
                      +.+||+|++..+.+. .+.. ..+...+  ++..++..+  ++  .+|+++++  +.+      ++++|++++++  ||.
T Consensus        70 ~~~gd~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~--~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~  142 (333)
T PRK10534         70 CERGEEYIVGQAAHNYLYEA-GGAAVLGSIQPQPIDAAA--DG--TLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK  142 (333)
T ss_pred             cCCCCeeEEechhhhhHhcC-CchHHhcCceEEeecCCC--CC--CCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence            889999886544332 1110 0012333  334444322  22  46788876  555      68999999755  599


Q ss_pred             cCC--CCcc---c-cCCCcEEEEeccCcCCCC-----c-cccccc-cEEEeCCCccccCCccE-EEEEcHHHHhccCCCC
Q 043610          224 EFK--EYPS---A-KNSTGILVADMSSNFCSK-----P-VDVTRF-GVIYAGAQKNVGPSGVT-IVIVRKDLLGNAQDKT  289 (430)
Q Consensus       224 ~~p--ei~~---~-~~~g~~lvvD~a~s~G~~-----~-idl~~~-d~~~~s~~K~~gp~G~g-~l~v~~~~~~~~~~~~  289 (430)
                      ++|  +|.+   + +++++++++|+++.++..     . .++.+. |.++.+++|.+|.+ +| +++.++++++.+....
T Consensus       143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~-~G~~~~~~~~~i~~~~~~~  221 (333)
T PRK10534        143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP-VGSLLVGNRDYIKRARRWR  221 (333)
T ss_pred             ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc-ccceEEcCHHHHHHHHHHH
Confidence            999  5544   3 577999999998765421     1 112222 65556899999854 56 6777888887654211


Q ss_pred             CccccccchhhcCCCCCCcc--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          290 PLMLDYKIHDENNSLYNTPP--CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~--~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      +            .+.+..+  ...+.+...+|+..      .+..++..+.++++.++|.+ .|+.+.+  +  .++ .
T Consensus       222 ~------------~~~~~~~~~~~~~a~~~~~l~~~------~~~~~~~~~~r~~l~~~L~~-~g~~~~~--~--~~n-f  277 (333)
T PRK10534        222 K------------MTGGGMRQAGILAAAGLYALKHN------VARLQEDHDNAAWLAEQLRE-AGADVMR--Q--DTN-M  277 (333)
T ss_pred             H------------HhCCchhhHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHh-CCCccCC--C--Cce-E
Confidence            1            0111111  22233333344321      22333444567899999997 6887653  1  232 3


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.+++ ....++.+.|.++||.+.++.    .+|++.+..++++++++++++|++++.|
T Consensus       278 v~~~~~~-~~~~~~~~~l~~~gi~v~~~~----~~rl~~~~r~t~e~~~~~~~~l~~~~~~  333 (333)
T PRK10534        278 LFVRVGE-EQAAALGEYMRERNVLINASP----IVRLVTHLDVSREQLAEVVAHWRAFLAR  333 (333)
T ss_pred             EEEECCc-hhHHHHHHHHHHcCeeecCCc----eEEEEEEeCCCHHHHHHHHHHHHHHhcC
Confidence            3455653 123368888899999997753    4899987777999999999999998764

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.82  E-value=5.9e-19  Score=175.98  Aligned_cols=280  Identities=15%  Similarity=0.139  Sum_probs=191.1

Q ss_pred             HHHHHHHHHHHhC------CCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEec
Q 043610          117 IEKAESDLRALLN------IPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS  188 (430)
Q Consensus       117 ~~~~r~~la~l~g------~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~  188 (430)
                      ..++|+.++++++      .+++..+++ ++|+.+++..++..+ .++||.|++..+.+.+..  +.++..| +++.++.
T Consensus        46 ~~~lr~~ia~~~~~~~~~~~~~~~~i~~-~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~--~~~~~~g~~~~~~~~  122 (363)
T PF00155_consen   46 YPELREAIADFLGRRYGVPVDPEANILV-TSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYI--EAARLLGAEVIPVPL  122 (363)
T ss_dssp             HHHHHHHHHHHHHHHHTHHTTGGEGEEE-ESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHH--HHHHHTTSEEEEEEE
T ss_pred             hHHHHHHHHHHhhhccCcccccceEEEE-ecccccchhhhhhcccccccccceecCCcccccc--ccccccCceeeeccc
Confidence            3477788888888      444324555 577888888877777 779999999888877653  4566777 7777765


Q ss_pred             CCCCcCCCCCCccccc--cCC------CccEEEEeecCCCccccCC--CCcc---c-cCCCcEEEEeccCcCCCCc----
Q 043610          189 GKAEKYTKIPNFDALE--QNP------DAKYLHICANETIHGVEFK--EYPS---A-KNSTGILVADMSSNFCSKP----  250 (430)
Q Consensus       189 ~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p--ei~~---~-~~~g~~lvvD~a~s~G~~~----  250 (430)
                      ....++  .+|+++++  +++      ++++|++++++||||..++  ++.+   + +++|+++++|++++.....    
T Consensus       123 ~~~~~~--~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~  200 (363)
T PF00155_consen  123 DSENDF--HLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDF  200 (363)
T ss_dssp             EETTTT--EETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHT
T ss_pred             cccccc--cccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCcc
Confidence            322122  47777776  444      5789999999999999999  4444   3 5789999999998754432    


Q ss_pred             ----cccccc-c-EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH
Q 043610          251 ----VDVTRF-G-VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY  322 (430)
Q Consensus       251 ----idl~~~-d-~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~  322 (430)
                          ..++.. + +++.|++|.+|.+|  +|++++++++++.+..       +   ..    .+..+.....++..++..
T Consensus       201 ~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~-------~---~~----~~~~~~~~~~~~~~~l~~  266 (363)
T PF00155_consen  201 GPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRR-------F---QR----SGLSSSPMQAAAAAALSD  266 (363)
T ss_dssp             HHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHH-------H---HH----HTTSSHHHHHHHHHHHHH
T ss_pred             Ccccccccccccceeeeeccccccccccccccccchhhhhhhhhh-------c---cc----cccccchhhHHHHHhhhc
Confidence                112222 3 78999999999888  9999999888776431       0   00    011255555556655543


Q ss_pred             HHH-hcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--C
Q 043610          323 LLE-LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--S  398 (430)
Q Consensus       323 l~~-~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~  398 (430)
                      ... ..-++++.+++++.++++.+.|.+ .|+.+.+  +  .++..+...++. ..+.++.+.|.++ ||.+.+|..  .
T Consensus       267 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~~~~~~~--~--~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~pg~~~~~  340 (363)
T PF00155_consen  267 PELVEKWLEELRERLRENRDLLREALEE-IGITVLP--P--EAGFFLWVRLDP-NDAEELAQELLEEYGILVRPGSYFGV  340 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTSEEEH--H--SBSSEEEEEESH-HHHHHHHHHHHHHHTEEEEEGGGGTS
T ss_pred             ccccccccccchhhHHHHHHHHHHHHHH-hhhheee--c--cCccEEEEEccc-chHHHHHHHHHHhCCEEEEecCCCCC
Confidence            321 014678899999999999999987 4888764  1  133333334442 1123799999887 999887642  2


Q ss_pred             CCeeEEeecCCCCHHHHHHHHHHH
Q 043610          399 VGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       399 ~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      .+++||++ ...+++++++++++|
T Consensus       341 ~~~iRi~~-a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  341 PGYIRISL-ASHSEEDLEEALERL  363 (363)
T ss_dssp             TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred             CCEEEEEe-ccCCHHHHHHHHhhC
Confidence            56899999 667999999999876

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.82  E-value=2.7e-18  Score=177.57  Aligned_cols=299  Identities=14%  Similarity=0.079  Sum_probs=194.6

Q ss_pred             CcHHHHHHHHHHHHHHHHHhCC------------CCCcEEEEEeCcHHHHHHHHHhhc----CCC---------------
Q 043610          109 RGKEFKSIIEKAESDLRALLNI------------PQEYSVLFLQGGATTQFAAVPLNL----CTP---------------  157 (430)
Q Consensus       109 ~~~~~~~~~~~~r~~la~l~g~------------~~~~~vv~~~~gaT~a~~~~~~sl----~~~---------------  157 (430)
                      .++.+.++.+.+.++++++++.            ++...-+| ++|||+++..++...    +.+               
T Consensus       123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~-tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~  201 (522)
T TIGR03799       123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAF-CSGGTVANITALWVARNRLLKADGDFKGVAREGLFAA  201 (522)
T ss_pred             cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEE-cCchHHHHHHHHHHHHHHhccccccccccccccchhh
Confidence            4677778888999999999853            11112344 578899887654431    111               


Q ss_pred             -------CCcEEEEeCChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc--cC----CCccEEEEe--ecC
Q 043610          158 -------NDPVDYIVTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE--QN----PDAKYLHIC--ANE  218 (430)
Q Consensus       158 -------gd~vl~~~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i~----~~~~lv~i~--~~~  218 (430)
                             +..|++....|++.  .+.++..|    +++.+++++   .+ .+|+++|+  +.    .+++.++++  +.+
T Consensus       202 ~~~~~~~~~~v~~S~~~H~S~--~kaa~~lglg~~~v~~vp~d~---~g-~~d~~~L~~~i~~~~~~g~~~~~vvataGt  275 (522)
T TIGR03799       202 LKHYGYDGLAILVSERGHYSL--GKAADVLGIGRDNLIAIKTDA---NN-RIDVDALRDKCAELAEQNIKPLAIVGVAGT  275 (522)
T ss_pred             hhhccCCceEEEECCCchHHH--HHHHHHcCCCcccEEEEEeCC---CC-cCCHHHHHHHHHHHHHCCCCcEEEEEEecC
Confidence                   12344344456653  33444444    466677743   34 57888886  43    566777666  558


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc-----cc---cccEEEeCCCccc-cCCccEEEEEcH-HHHhcc
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD-----VT---RFGVIYAGAQKNV-GPSGVTIVIVRK-DLLGNA  285 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-----l~---~~d~~~~s~~K~~-gp~G~g~l~v~~-~~~~~~  285 (430)
                      |.||.+.|  +|+++ +++|++++||++++.+....+     ++   ..|++++++|||+ +|.|+|++++++ ++++.+
T Consensus       276 t~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~  355 (522)
T TIGR03799       276 TETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAI  355 (522)
T ss_pred             cCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHh
Confidence            89999999  89986 789999999999997766544     33   4589999999999 699999999975 454444


Q ss_pred             CCCCCccccccc--hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          286 QDKTPLMLDYKI--HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       286 ~~~~p~~~~~~~--~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      ... +.|+....  ........+|.+... ..+..+|+++.. .|++++.++..++++++.+.|.+.++++++. ++  .
T Consensus       356 ~~~-~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~-~G~~~ii~~~~~la~~l~~~L~~~~~~el~~-~p--~  429 (522)
T TIGR03799       356 EHH-AEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGR-KGYELLIDQSIEKAKYFADLIQQQPDFELVT-EP--E  429 (522)
T ss_pred             ccC-cchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhhCCCeEEec-CC--C
Confidence            332 22321000  000111224555443 457888998874 5899999999999999999999878999874 32  2


Q ss_pred             ccceEEEEcCCCch-------------------h---HHHHHHHHHcCCeecC-----CCC--CC--CeeEEeecC-CCC
Q 043610          364 SFMNVPFTLEKSDL-------------------E---AEFVKEAAKEKMVQLK-----GHR--SV--GGMRASIYN-AMP  411 (430)
Q Consensus       364 s~~iv~f~~~~~~~-------------------~---~~~~~~L~~~Gi~~~~-----g~~--~~--g~iRis~~~-~~t  411 (430)
                      . .+++|++.+.+.                   +   .++.+++.+.|.....     +.+  ..  -.+|+++.+ .+|
T Consensus       430 l-~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt  508 (522)
T TIGR03799       430 L-CLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTT  508 (522)
T ss_pred             c-cEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCC
Confidence            2 478898643111                   1   1355556666766332     111  11  259999988 567


Q ss_pred             HHHHHHHHHH
Q 043610          412 LAGVEKLVAF  421 (430)
Q Consensus       412 ~edv~~ll~~  421 (430)
                      ++||+.+++-
T Consensus       509 ~~~i~~~l~~  518 (522)
T TIGR03799       509 HEILQDILDE  518 (522)
T ss_pred             HHHHHHHHHH
Confidence            8999998764

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.82  E-value=9.5e-18  Score=170.29  Aligned_cols=329  Identities=12%  Similarity=0.161  Sum_probs=200.5

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHh------CCCCCcEEEE
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALL------NIPQEYSVLF  138 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~------g~~~~~~vv~  138 (430)
                      .+.++.++.|-  .++++.+.+++.+.+.+.. ......|..   .....    ++|+.+++++      +++++ +|++
T Consensus        33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~----~LR~aia~~~~~~~g~~~~~~-~I~i  104 (409)
T PRK07590         33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGP---EQGYD----FLREKIAENDYQARGCDISAD-EIFI  104 (409)
T ss_pred             CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCC---CCCCH----HHHHHHHHHHHHhcCCcCChh-hEEE
Confidence            34566776654  3467888998888765321 001111111   11122    4445555543      45665 6766


Q ss_pred             EeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-C-----------ceEEecCCCCcCCCCCCccccccC
Q 043610          139 LQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-N-----------PQVIWSGKAEKYTKIPNFDALEQN  206 (430)
Q Consensus       139 ~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~-----------~~~v~~~~~~~~g~~~d~~~l~i~  206 (430)
                       ++|+.+++..+ ..++.|||+|++..+++..+.  ..++..| +           ++.++...+  .+..+|.    ..
T Consensus       105 -t~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~--~~~~~~g~~~~~~~~~~~~~~~~v~~~~~--~~~~~d~----~~  174 (409)
T PRK07590        105 -SDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYV--DTNVMAGRTGEANEDGRYSGIVYLPCTAE--NNFVPEL----PE  174 (409)
T ss_pred             -CCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchH--HHHHHcCCcccccccccccceeEeecccc--cCCcccC----cc
Confidence             57899999885 456789999998887766543  3455566 4           555555321  1212221    13


Q ss_pred             CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC----CCCcccc---ccc-c--EEEeCCCccccCC
Q 043610          207 PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF----CSKPVDV---TRF-G--VIYAGAQKNVGPS  270 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~----G~~~idl---~~~-d--~~~~s~~K~~gp~  270 (430)
                      +++|+|++++++||||.+++  +   |.++ +++|++++.|++++-    +..+..+   +.. +  +++.|++|.+|.+
T Consensus       175 ~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~p  254 (409)
T PRK07590        175 EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFT  254 (409)
T ss_pred             cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCc
Confidence            67899999999999999999  3   4443 578999999998752    1112122   222 2  6689999999988


Q ss_pred             c--cEEEEEcHHHHhccCCC-CCccc-cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          271 G--VTIVIVRKDLLGNAQDK-TPLML-DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       271 G--~g~l~v~~~~~~~~~~~-~p~~~-~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                      |  +|++++++++++..... ..... .+.  ........+.+...+.++..+++.-. ...++++++++++.++.+.+.
T Consensus       255 GlRiG~~i~~~~li~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~q~a~~~~l~~~~-~~~~~~~~~~~~~~r~~l~~~  331 (409)
T PRK07590        255 GTRCAYTVVPKELKGKTSDGEGVSLNSLWN--RRQSTKFNGVSYIVQRAAEAVYSPEG-KAQIKELIDYYMENAKIIREG  331 (409)
T ss_pred             CceeEEEEcCHHHhhhccccchhhhHHHHH--HHHhhcccCcCHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHH
Confidence            8  89999999887632110 00000 000  00001113456667777776664210 113566788888889999999


Q ss_pred             HHccCCceecCCCCCCCccceEEEEcCCCchh-HHHHHHHH-HcCCeecCCCC--C--CCeeEEeecCCCCHHHHHHHHH
Q 043610          347 IDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLE-AEFVKEAA-KEKMVQLKGHR--S--VGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       347 l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~-~~~~~~L~-~~Gi~~~~g~~--~--~g~iRis~~~~~t~edv~~ll~  420 (430)
                      |.+ .|+.+.+  + ..+ ..+.+.+++ ..+ .++.+.|. ++||.+.+|..  .  .+++||++.  .+++++++.++
T Consensus       332 L~~-~~~~~~~--~-~g~-~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~l~  403 (409)
T PRK07590        332 LES-AGFEVYG--G-VNA-PYIWVKTPD-GMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF--GSRENVLEAME  403 (409)
T ss_pred             HHh-cCCceec--C-Ccc-eEEEEECCC-CCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc--CCHHHHHHHHH
Confidence            987 5765432  1 112 234567764 233 36887765 57999887642  1  358999964  47899999999


Q ss_pred             HHHHH
Q 043610          421 FMKDF  425 (430)
Q Consensus       421 ~L~~~  425 (430)
                      .|.++
T Consensus       404 rl~~~  408 (409)
T PRK07590        404 RIKKA  408 (409)
T ss_pred             HHHhh
Confidence            88765

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.82  E-value=1.4e-18  Score=171.33  Aligned_cols=261  Identities=13%  Similarity=0.062  Sum_probs=176.3

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK  196 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~  196 (430)
                      .++|+.+++++|.+++ ++++ ++|+++++.++... +.+| +|++..+.+.++  ...++..| ++..++         
T Consensus        50 ~~lr~~la~~~~~~~~-~i~~-t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~--~~~~~~~g~~~~~~~---------  114 (330)
T TIGR01140        50 DELRAAAAAYYGLPAA-SVLP-VNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEY--ARAWRAAGHEVVELP---------  114 (330)
T ss_pred             HHHHHHHHHHhCCChh-hEEE-CCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHH--HHHHHHcCCEEEEeC---------
Confidence            5888999999998765 6665 58899999986544 5677 677666554443  34455667 544332         


Q ss_pred             CCCccccc-cCCCccEEEEeecCCCccccCC--CC---ccc-cCCCcEEEEeccCcCCCCccccc------cccEEEeCC
Q 043610          197 IPNFDALE-QNPDAKYLHICANETIHGVEFK--EY---PSA-KNSTGILVADMSSNFCSKPVDVT------RFGVIYAGA  263 (430)
Q Consensus       197 ~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~G~~~idl~------~~d~~~~s~  263 (430)
                        |+++++ .-.++++|++++++||||.+++  ++   .++ +++|+++++|+++.-.....++.      +..+++.|+
T Consensus       115 --d~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~  192 (330)
T TIGR01140       115 --DLDRLPAALEELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSL  192 (330)
T ss_pred             --CHHHHHhhcccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEec
Confidence              445555 2256889999999999999999  44   443 57899999999975222211221      123889999


Q ss_pred             CccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          264 QKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       264 ~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      +|++|++|  +|++++++++++.+....+              ..+.+.+.+.++...++.   ....+.++++++++++
T Consensus       193 SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--------------~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~  255 (330)
T TIGR01140       193 TKFFGLAGLRLGFVVAHPALLARLREALG--------------PWTVNGPARAAGRAALAD---TAWQAATRARLAAERA  255 (330)
T ss_pred             chhhcCchhhhhheeCCHHHHHHHHhcCC--------------CCCchHHHHHHHHHHHhc---hHHHHHHHHHHHHHHH
Confidence            99999778  6999999998776533111              124455666666666642   2224677899999999


Q ss_pred             HHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCHHHHHH
Q 043610          342 LLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~  417 (430)
                      .+++.|++..++++.+   . .+ ..+.+.+++   ..++.++|.++||.+.+|...    .+++||+++.  ..++ ++
T Consensus       256 ~l~~~L~~~~~~~~~~---~-~~-~f~~~~~~~---~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~--~~~~-~~  324 (330)
T TIGR01140       256 RLAALLARLGGLEVVG---G-TA-LFLLVRTPD---AAALHEALARRGILIRDFDNFPGLDPRYLRFALPT--DEEN-DR  324 (330)
T ss_pred             HHHHHHHhCCCceECC---C-CC-eEEEEEcCC---HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC--HHHH-HH
Confidence            9999999732244432   1 12 223345442   347999999999998886532    3579999974  3355 88


Q ss_pred             HHHHHH
Q 043610          418 LVAFMK  423 (430)
Q Consensus       418 ll~~L~  423 (430)
                      ++.+|+
T Consensus       325 ~~~~l~  330 (330)
T TIGR01140       325 LEEALA  330 (330)
T ss_pred             HHHhhC
Confidence            888764

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.82  E-value=4.8e-18  Score=169.40  Aligned_cols=307  Identities=13%  Similarity=0.062  Sum_probs=196.1

Q ss_pred             CCCCceeecCC-C-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC---CCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAG-P-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN---IPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~g-p-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g---~~~~~~vv~~~~  141 (430)
                      .++..++++.| | .+.++.+.+++++....   ..   |...   ....++.+++.+.+.+.+|   ++++ +|++ ++
T Consensus        19 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~---Y~~~---~G~~~lr~~ia~~~~~~~~~~~~~~~-~I~i-t~   87 (357)
T TIGR03539        19 HPDGIVDLSVGTPVDPVPPLIRAALAAAADA---PG---YPQT---WGTPELREAIVDWLERRRGVPGLDPT-AVLP-VI   87 (357)
T ss_pred             CCCCeEEccCCCCCCCCCHHHHHHHHHHHhh---CC---CCcc---cCCHHHHHHHHHHHHHhcCCCCCCcC-eEEE-cc
Confidence            33456677665 2 34567777777654321   01   1111   1123344455566655544   5455 7776 57


Q ss_pred             cHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCC
Q 043610          142 GATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANET  219 (430)
Q Consensus       142 gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t  219 (430)
                      |+++++..++..+ +++||+|++..+++.+...  .++..| +++.++           +++.++ .+++++|++++++|
T Consensus        88 G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--~~~~~g~~~~~v~-----------~~~~l~-~~~~~~v~~~~p~N  153 (357)
T TIGR03539        88 GTKELVAWLPTLLGLGPGDTVVIPELAYPTYEV--GALLAGATPVAAD-----------DPTELD-PVGPDLIWLNSPGN  153 (357)
T ss_pred             ChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHH--HHHhcCCEEeccC-----------ChhhcC-ccCccEEEEeCCCC
Confidence            8999999988777 6899999988777766542  344556 443221           112222 35789999999999


Q ss_pred             CccccCC--C---Cccc-cCCCcEEEEeccCc-CC--CCc---cccc----cc--cEEEeCCCccccCCc--cEEEEEcH
Q 043610          220 IHGVEFK--E---YPSA-KNSTGILVADMSSN-FC--SKP---VDVT----RF--GVIYAGAQKNVGPSG--VTIVIVRK  279 (430)
Q Consensus       220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G--~~~---idl~----~~--d~~~~s~~K~~gp~G--~g~l~v~~  279 (430)
                      |||..++  +   |.++ +++|+++++|+++. +.  ..+   ++..    ..  -+++.|++|.+|.+|  +|+++.++
T Consensus       154 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~  233 (357)
T TIGR03539       154 PTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP  233 (357)
T ss_pred             CcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH
Confidence            9999999  3   4454 58899999999874 22  111   1110    11  278899999998778  79999888


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      ++++.+....          .  .....++.+.+.++..+|+..   ..++.++++++++++++.+.|.+ .|+.+.+  
T Consensus       234 ~~~~~~~~~~----------~--~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~L~~-~g~~~~~--  295 (357)
T TIGR03539       234 ALVAELLTVR----------K--HAGLMVPAPVQAAMVAALGDD---GHVAEQKARYAARRAQLKPALEK-AGFRIDH--  295 (357)
T ss_pred             HHHHHHHHHH----------h--hcccCCCHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHHHHHHHHH-cCCCCcC--
Confidence            8877542110          0  011345666777777777531   23567788888899999999987 6765442  


Q ss_pred             CCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      +  .++..+.+.++.  ...++.+.|.++||.+.+|..    ..+++|||++.  +++++++.++.|
T Consensus       296 p--~~~~~~~~~~~~--~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~--~~~~i~~~~~~l  356 (357)
T TIGR03539       296 S--EAGLYLWATRGE--DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA--TDERIAAAVARL  356 (357)
T ss_pred             C--CccEEEEEECCC--CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC--CHHHHHHHHHhh
Confidence            1  133333344432  233688889999999887642    23589999985  688899888765

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.82  E-value=5.1e-18  Score=167.38  Aligned_cols=261  Identities=12%  Similarity=0.060  Sum_probs=180.7

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK  196 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~  196 (430)
                      .++|+.+++++|.+   +|++ ++|+.+++..+..  +.+||+|++..+++..+.  ..++..| +++.++..       
T Consensus        52 ~~Lr~~ia~~~~~~---~I~i-t~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~--~~~~~~g~~~~~v~~~-------  116 (330)
T PRK05664         52 DGLEAAARAYYGAP---QLLP-VAGSQAAIQALPR--LRAPGRVGVLSPCYAEHA--HAWRRAGHQVRELDEA-------  116 (330)
T ss_pred             HHHHHHHHHHhCCC---CEEE-CcCHHHHHHHHHH--ccCCCEEEEcCCChHHHH--HHHHHcCCeEEEechh-------
Confidence            46789999999863   6776 5789999988753  478999998777765543  3566677 66655431       


Q ss_pred             CCCccccc-cCCCccEEEEeecCCCccccCC--CCccc----cCCCcEEEEeccCcCCCC--c-ccccccc--EEEeCCC
Q 043610          197 IPNFDALE-QNPDAKYLHICANETIHGVEFK--EYPSA----KNSTGILVADMSSNFCSK--P-VDVTRFG--VIYAGAQ  264 (430)
Q Consensus       197 ~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei~~~----~~~g~~lvvD~a~s~G~~--~-idl~~~d--~~~~s~~  264 (430)
                           +++ .-++++++++++++||||.+++  ++.++    +++|+++++|+++.-...  + ..+...+  +++.|++
T Consensus       117 -----~~~~~~~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfS  191 (330)
T PRK05664        117 -----EVEAALDSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFG  191 (330)
T ss_pred             -----hHhhhhcCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecc
Confidence                 222 1246889999999999999999  44442    478999999998753321  1 1222233  7889999


Q ss_pred             ccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          265 KNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       265 K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      |.+|.+|  +||++.++++++.+....              ...+.+...+.++..+|+...   ..+..++++.+.+++
T Consensus       192 K~~gl~GlRiG~~v~~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~~L~~~~---~~~~~~~~~~~~r~~  254 (330)
T PRK05664        192 KFFGLAGARLGFVLAEPALLRALAELL--------------GPWTVSGPTRWLAQAALADTP---WQRRQRERLLAASQR  254 (330)
T ss_pred             ccccCCCcceEEEEeCHHHHHHHHHhc--------------CCCCCCHHHHHHHHHHHhChH---HHHHHHHHHHHHHHH
Confidence            9999889  999999998887643211              012335566666777775321   245678888888999


Q ss_pred             HHHHHHccCCceecCCCCCCCccce-EEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHH
Q 043610          343 LYNVIDGSNGFYKCPVEKSVRSFMN-VPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       343 l~~~l~~~~G~~~~~~~~~~rs~~i-v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~  421 (430)
                      +.+.|++ .|+...      .+..+ +.+.++   ...++.+.|.++||.+.. ....+++|||++.  +.+++++++++
T Consensus       255 l~~~L~~-~~~~~~------~~~~~f~~~~~~---~~~~~~~~l~~~gi~v~~-f~~~~~iRis~~~--~~~~~~~l~~a  321 (330)
T PRK05664        255 LAALLRR-HGLTPA------GGCALFQWVRTE---DAAALHEFLARRGILTRL-FEQPASLRFGLPA--DEADWARLDQA  321 (330)
T ss_pred             HHHHHHH-CCCccc------CCcceEEEEecC---CHHHHHHHHHHCCeEEEE-CCCCCeEEEECCC--CHHHHHHHHHH
Confidence            9999987 565321      12222 223333   134788899999999853 2234689999985  68899999999


Q ss_pred             HHHHHHh
Q 043610          422 MKDFQAK  428 (430)
Q Consensus       422 L~~~~~~  428 (430)
                      |+++.+.
T Consensus       322 l~~~~~~  328 (330)
T PRK05664        322 LLAYRKE  328 (330)
T ss_pred             HHHHHhh
Confidence            9988654

>PRK05839 hypothetical protein; Provisional

Probab=99.82  E-value=7e-18  Score=169.25  Aligned_cols=313  Identities=13%  Similarity=0.127  Sum_probs=196.9

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeC
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLN--IPQEYSVLFLQG  141 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~  141 (430)
                      ...++.|+.|-  .+.++.+.+++.+....          ...+.  ....+..+.+.+.+++.+|  ++++ +|+++ +
T Consensus        23 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~----------~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~-~I~it-~   90 (374)
T PRK05839         23 EYKGLDLTIGEPQFETPKFIQDALKNNAHL----------LNKYPKSAGEESLREAQRGFFKRRFKIELKEN-ELIPT-F   90 (374)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHhhc----------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcc-eEEEe-c
Confidence            33566666544  34567788887765421          11111  1123444566666777767  4554 67664 7


Q ss_pred             cHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecC
Q 043610          142 GATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANE  218 (430)
Q Consensus       142 gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~  218 (430)
                      |+++++..++..++  ++||.|++..+++..+.  ..++..| ++..++..++  .+..+|.++.++ +++++|++++++
T Consensus        91 G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~--~~~~~~g~~v~~v~~~~~--~~~~~d~~~~~~-~~~k~v~i~nP~  165 (374)
T PRK05839         91 GTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYE--GAAIASRAKVLLMPLTKE--NDFTPSLNEKEL-QEVDLVILNSPN  165 (374)
T ss_pred             CcHHHHHHHHHHHhcCCCCCEEEECCCCchhhH--HHHHhcCCEEEEeecccc--cCCcCCcchhhh-ccccEEEEeCCC
Confidence            89999988877764  47888887666655432  3455678 8877877432  222344433323 579999999999


Q ss_pred             CCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cc--ccc------cccc--EEEeCCCccccCCc--cEEEE
Q 043610          219 TIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KP--VDV------TRFG--VIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       219 t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~--idl------~~~d--~~~~s~~K~~gp~G--~g~l~  276 (430)
                      ||||..++  +   |.++ +++|+++++|+++..-.    .+  .+.      .+.+  +++.|++|.+|.+|  +|+++
T Consensus       166 NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii  245 (374)
T PRK05839        166 NPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIA  245 (374)
T ss_pred             CCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEe
Confidence            99999999  3   3443 58899999999865211    11  111      1223  78899999999888  99999


Q ss_pred             EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      .++++++.+.....            ......+...+.++..++..   ..-++..++++++.++.+++.|    |+. .
T Consensus       246 ~~~~~~~~~~~~~~------------~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l----~~~-~  305 (374)
T PRK05839        246 GDASILKKYKAYRT------------YLGCASPLPLQKAAAVAWLD---DEHAEFFRNIYAKNLKLAREIL----GIT-I  305 (374)
T ss_pred             cCHHHHHHHHHHHh------------hcCCCCChHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHhc----CCC-C
Confidence            99888776432100            01123344556666655532   2235667777777777766654    332 1


Q ss_pred             CCCCCCCccceEEEEcCCCchhHHHHHHHH-HcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          357 PVEKSVRSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +     ....-+.+.+++   +.++.++|. ++||.+.+|..      ..+++|||+..  +++++++.++.|++++.
T Consensus       306 p-----~gg~fi~~~~~~---~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        306 P-----PATFYVWLPVDN---DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLEKALEIIKTYLE  373 (374)
T ss_pred             C-----CeeEEEEEeCCC---hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence            1     122223345542   347888885 58999888632      14689999974  68999999999998764

>PRK08175 aminotransferase; Validated

Probab=99.82  E-value=4.8e-18  Score=171.72  Aligned_cols=327  Identities=12%  Similarity=0.057  Sum_probs=204.4

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ga  143 (430)
                      .+.++.++.|-  ...++.+.+++.+.+.+....+   |..   .....+..+.+.+.+.+.+|.  +++.++++ ++|+
T Consensus        28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~---Y~~---~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~-t~G~  100 (395)
T PRK08175         28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHG---YST---SRGIPRLRRAISRWYQDRYDVDIDPESEAIV-TIGS  100 (395)
T ss_pred             CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCC---CCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEE-ccCc
Confidence            34556665532  2345667777766553211011   111   111233334444555544454  33324665 5789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c---CCCccEEEEeec
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q---NPDAKYLHICAN  217 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i---~~~~~lv~i~~~  217 (430)
                      ++++..++..+++|||+|++..+++....  ..++..| ++..++..++   +  .+.++++  +   .+++++|+++++
T Consensus       101 ~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~---~--~~~~~l~~~l~~~~~~~~~v~i~~p  173 (395)
T PRK08175        101 KEGLAHLMLATLDHGDTVLVPNPSYPIHI--YGAVIAGAQVRSVPLVEG---V--DFFNELERAIRESYPKPKMMILGFP  173 (395)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCCCcchH--HHHHHcCCeEEEEecccC---C--CcHHHHHHHHhhccCCceEEEEeCC
Confidence            99999998888999999998777765432  2244567 7777776431   1  1234554  3   357999999999


Q ss_pred             CCCccccCC-----CCccc-cCCCcEEEEeccCcCCC----Cccc---ccc-cc--EEEeCCCccccCCc--cEEEEEcH
Q 043610          218 ETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS----KPVD---VTR-FG--VIYAGAQKNVGPSG--VTIVIVRK  279 (430)
Q Consensus       218 ~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~----~~id---l~~-~d--~~~~s~~K~~gp~G--~g~l~v~~  279 (430)
                      +||||..++     +|.++ +++|+++++|+++....    .+..   +.. .|  +++.|++|.+|.+|  +|+++.++
T Consensus       174 ~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~  253 (395)
T PRK08175        174 SNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP  253 (395)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH
Confidence            999999999     34444 58999999999874211    1111   222 23  56799999999778  89999999


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      ++++.+..... +           ...+.+...+.++..+|+...  ..++.+++++++.++++++.|.+ .|+.+..  
T Consensus       254 ~l~~~~~~~~~-~-----------~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~--  316 (395)
T PRK08175        254 ELVSALARIKS-Y-----------HDYGTFTPLQVAAIAALEGDQ--QCVRDIAEQYKRRRDVLVKGLHE-AGWMVEM--  316 (395)
T ss_pred             HHHHHHHHHHh-h-----------cccCCCcHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHH-cCCcccC--
Confidence            88876432110 0           112333445555555664321  13667788888999999999987 5765432  


Q ss_pred             CCCCccceEEEEcCCCc--h-hHHHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          360 KSVRSFMNVPFTLEKSD--L-EAEFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~--~-~~~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      + . ....+.+.+++..  . +.+++.+| +++||.+.+|..    ..+++||++.  .+++.++..++.|++++++.
T Consensus       317 p-~-~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l~~~  390 (395)
T PRK08175        317 P-K-ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMFRAD  390 (395)
T ss_pred             C-C-EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhc
Confidence            1 1 2234556776421  1 23788766 568999887642    2357999996  37888999999999888764

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.81  E-value=5.2e-18  Score=185.41  Aligned_cols=289  Identities=12%  Similarity=0.006  Sum_probs=200.2

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCC--CcEEEEeCChhHHH--HHHHHHHhC-Cc
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPN--DPVDYIVTGSWGDK--AFKEAQKFC-NP  183 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~g--d~vl~~~~g~~~~~--~~~~a~~~g-~~  183 (430)
                      ++...+.+-+.+..+++++|.+.. ++.++ .++|.+.+++++++ ++++  ++|++.+..+.+..  |...++..| ++
T Consensus       116 sQG~Leal~~~Qt~la~LtG~~~a-naSl~-d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev  193 (954)
T PRK05367        116 SQGRLEALLNFQTMVADLTGLEIA-NASLL-DEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEV  193 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCChh-hcccc-ccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEE
Confidence            456678888999999999999875 66665 78999999988886 4554  88887776666543  444566778 77


Q ss_pred             eEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cE
Q 043610          184 QVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GV  258 (430)
Q Consensus       184 ~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~  258 (430)
                      ++++...        +   +. ++++ ..++.+..+.+|.+.|  +|+++ +++|++++||+.+.......+..++  |+
T Consensus       194 ~~~~~~~--------d---~~-~~~~-~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi  260 (954)
T PRK05367        194 VVGDAAK--------A---LD-HDDV-FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADI  260 (954)
T ss_pred             EEecCcc--------C---CC-cccE-EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCE
Confidence            7776521        1   11 2344 3456677889999999  78886 7899999999977444443466666  79


Q ss_pred             EEeCCCcc-----ccCCccEEEEEcHHHHhccCCCC-Cccccccc------hh---h--cCCCCCCccHHHHHHHHHH--
Q 043610          259 IYAGAQKN-----VGPSGVTIVIVRKDLLGNAQDKT-PLMLDYKI------HD---E--NNSLYNTPPCYCIYMCGLV--  319 (430)
Q Consensus       259 ~~~s~~K~-----~gp~G~g~l~v~~~~~~~~~~~~-p~~~~~~~------~~---~--~~~~~~T~~~~~~~a~~~a--  319 (430)
                      +++++|||     +|-||.||+++++++...+.+.. .+..|...      ..   +  -+...+|.|.....++.+.  
T Consensus       261 ~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a  340 (954)
T PRK05367        261 AVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMA  340 (954)
T ss_pred             EEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHH
Confidence            99999999     54226999999999877654321 11011000      00   0  0122357665543333222  


Q ss_pred             ---HHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC
Q 043610          320 ---FEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH  396 (430)
Q Consensus       320 ---l~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~  396 (430)
                         +.++. ..|++++.+|+..++++++++|++ .|+++..  +. .. ..++|.++.  ...++.++|.++||....  
T Consensus       341 ~~y~~~~g-~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~--~~-~f-~~~~~~~~~--~~~~i~~~l~~~gi~~~~--  410 (954)
T PRK05367        341 SMYAVYHG-PEGLKAIARRVHRLAAILAAGLRA-LGLEVVH--DS-FF-DTLTVEVGG--DAAAVLARALAAGINLRR--  410 (954)
T ss_pred             HHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHh-cCcccCC--CC-CC-CeEEEeCCC--CHHHHHHHHHHCCceecc--
Confidence               24454 359999999999999999999986 7888652  22 22 346677642  233799999999998732  


Q ss_pred             CCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          397 RSVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       397 ~~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      ...+.+|||++-++|++||++++++|.
T Consensus       411 ~~~~~l~is~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        411 VDDDHVGISLDETTTREDLAALLAVFG  437 (954)
T ss_pred             ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence            223579999999999999999999996

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.81  E-value=2.5e-18  Score=177.06  Aligned_cols=284  Identities=15%  Similarity=0.128  Sum_probs=186.7

Q ss_pred             HHHHHHHHHh----C----CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHH-HhC-CceEEec
Q 043610          119 KAESDLRALL----N----IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQ-KFC-NPQVIWS  188 (430)
Q Consensus       119 ~~r~~la~l~----g----~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~-~~g-~~~~v~~  188 (430)
                      ++|+.+++++    |    ++++ +|++ ++|+++++..++..+++|||.|++..+.+.+..  ..+. ..| +++.++.
T Consensus        90 ~LR~aiA~~l~~~~~~~~~v~~~-~Iii-t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~--~~~~~~~g~~~v~v~~  165 (468)
T PLN02450         90 AFKNALAEFMSEIRGNKVTFDPN-KLVL-TAGATSANETLMFCLAEPGDAFLLPTPYYPGFD--RDLKWRTGVEIVPIHC  165 (468)
T ss_pred             HHHHHHHHHHHHhhCCCCCcChH-HeEE-ccChHHHHHHHHHHhCCCCCEEEECCCCCCchH--HHHhhcCCcEEEEEec
Confidence            3445555554    4    4554 6766 588999999999999999999998777665532  2233 457 7777766


Q ss_pred             CCCCcCCCCCCccccc--cC------CCccEEEEeecCCCccccCC--CCcc---c-cCCCcEEEEeccCc---CCCCc-
Q 043610          189 GKAEKYTKIPNFDALE--QN------PDAKYLHICANETIHGVEFK--EYPS---A-KNSTGILVADMSSN---FCSKP-  250 (430)
Q Consensus       189 ~~~~~~g~~~d~~~l~--i~------~~~~lv~i~~~~t~tG~~~p--ei~~---~-~~~g~~lvvD~a~s---~G~~~-  250 (430)
                      ..+  .+..+++++++  +.      .++++|++|+++||||.+++  ++.+   + +++|+++|+|++++   +...+ 
T Consensus       166 ~~~--~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~  243 (468)
T PLN02450        166 SSS--NGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGF  243 (468)
T ss_pred             CCc--cCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCc
Confidence            432  23345666665  32      37899999999999999999  3433   3 57899999999976   32211 


Q ss_pred             ---ccc-c--------ccc--EEEeCCCccccCCc--cEEEEEcHHH-HhccCCCCCccccccchhhcCCCCCCccHHHH
Q 043610          251 ---VDV-T--------RFG--VIYAGAQKNVGPSG--VTIVIVRKDL-LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCI  313 (430)
Q Consensus       251 ---idl-~--------~~d--~~~~s~~K~~gp~G--~g~l~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~  313 (430)
                         +.+ .        ..+  +++.|++|.+|.+|  +|+++.+++. ++.+...              ...+..+.+.+
T Consensus       244 ~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~--------------~~~~~~s~~~Q  309 (468)
T PLN02450        244 VSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKM--------------SSFGLVSSQTQ  309 (468)
T ss_pred             ccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHH--------------hhcCCCCHHHH
Confidence               111 1        223  68899999999889  9999987554 3332110              01123466777


Q ss_pred             HHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC----ch-h-HHHHHHH-
Q 043610          314 YMCGLVFEYLL-ELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS----DL-E-AEFVKEA-  385 (430)
Q Consensus       314 ~a~~~al~~l~-~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~----~~-~-~~~~~~L-  385 (430)
                      .++..+|+.-. ...-++..++++++.++.+.+.|++ .|+.+.+  +  .+..-+.+.++..    .. + .++.++| 
T Consensus       310 ~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~-~gi~~~~--~--~~g~flwi~l~~~~~~~~~~~~~~l~~~ll  384 (468)
T PLN02450        310 YLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEA-AGIKCLK--S--NAGLFCWVDMRHLLKSNTFEAEMELWKKIV  384 (468)
T ss_pred             HHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcccC--C--CceEEEEEEchHhcCcCCchHHHHHHHHHH
Confidence            77777775310 0012566788899999999999987 5775442  1  1222344555421    11 1 2466666 


Q ss_pred             HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          386 AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       386 ~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +++||.+.+|..    ..|++||++.. .+++++++.++.|++++++
T Consensus       385 ~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~  430 (468)
T PLN02450        385 YEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVES  430 (468)
T ss_pred             HhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHh
Confidence            457999988753    25689999985 4578899999999888753

>PLN02590 probable tyrosine decarboxylase

Probab=99.81  E-value=1.1e-17  Score=172.84  Aligned_cols=343  Identities=13%  Similarity=0.034  Sum_probs=214.2

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC------cEEEEEe
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE------YSVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~------~~vv~~~  140 (430)
                      .-|+.+.+-+++.. ++.++..+.....+  ..+.    .+..++...++.+.+.++|++++|.|++      ..-+| +
T Consensus       129 ~hP~f~a~~~~~~~-~~~~lgd~l~sa~n--~~~~----~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~-~  200 (539)
T PLN02590        129 QSPSYFAYYASSTS-VAGFLGEMLNAGLS--VVGF----TWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVI-Q  200 (539)
T ss_pred             CCCCeeEeccCCCc-HHHHHHHHHHHhcc--cccC----CcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEE-c
Confidence            35556666666643 33444433332211  1111    1234677778888999999999999863      12344 5


Q ss_pred             CcHHHHHHHHHhhc----CC----C--CCcEEEEe-CChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc-
Q 043610          141 GGATTQFAAVPLNL----CT----P--NDPVDYIV-TGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE-  204 (430)
Q Consensus       141 ~gaT~a~~~~~~sl----~~----~--gd~vl~~~-~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~-  204 (430)
                      +|||+++..++...    .+    .  .+-+++.. ..|++.  .+.++-.|    .++.|+++..  .....|+++|+ 
T Consensus       201 sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv--~KAa~ilGlg~~~vr~Vp~d~~--~~~~md~~~L~~  276 (539)
T PLN02590        201 GTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSF--RKACLIGGIHEENIRLLKTDSS--TNYGMPPESLEE  276 (539)
T ss_pred             CchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHH--HHHHHHcCCCcccEEEEeCCCC--CCCcCCHHHHHH
Confidence            78999886554431    11    1  12233332 234542  23344344    4667776431  12257888886 


Q ss_pred             -cCC------CccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc--------ccccccEEEeCCCcc
Q 043610          205 -QNP------DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV--------DVTRFGVIYAGAQKN  266 (430)
Q Consensus       205 -i~~------~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--------dl~~~d~~~~s~~K~  266 (430)
                       |..      .+-+|+.+...|.+|.+-|  +|+++ +++|+|++||++++......        .++..|.+..++|||
T Consensus       277 ~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~  356 (539)
T PLN02590        277 AISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKW  356 (539)
T ss_pred             HHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhh
Confidence             432      2457888889999999999  89997 68999999999887544321        234458999999999


Q ss_pred             cc-CCccEEEEEcHH-HH-hccCCCCCccccccchh-------hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043610          267 VG-PSGVTIVIVRKD-LL-GNAQDKTPLMLDYKIHD-------ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN  336 (430)
Q Consensus       267 ~g-p~G~g~l~v~~~-~~-~~~~~~~p~~~~~~~~~-------~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~  336 (430)
                      ++ |.++|+++++++ .+ +... ..+.|+......       .......+.. +....+..+|+.+-. .|+.+..+++
T Consensus       357 l~~p~~cg~llvr~~~~l~~a~~-~~~~YL~~~~~~~~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~-~G~~~~i~~~  433 (539)
T PLN02590        357 LFANQTCSPLWVKDRYSLIDALK-TNPEYLEFKVSKKDTVVNYKDWQISLSRR-FRSLKLWMVLRLYGS-ENLRNFIRDH  433 (539)
T ss_pred             cCcCcCEEEEEecCHHHHHHHhh-cCHHHhCCcccccccCCCccccCCCCCCc-hHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence            96 999999999864 22 2221 223344221100       0001112223 234555667776654 4899999999


Q ss_pred             HHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc--------hhHHHHHHHHHcCCeecCCCCCC--CeeEEee
Q 043610          337 RKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD--------LEAEFVKEAAKEKMVQLKGHRSV--GGMRASI  406 (430)
Q Consensus       337 ~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~--------~~~~~~~~L~~~Gi~~~~g~~~~--g~iRis~  406 (430)
                      .++++++.+.|++..+|+++. ++   ...+|+|++.+.+        ...++.++|.+.|........-.  -.||+++
T Consensus       434 ~~lA~~~~~~l~~~~~fel~~-~~---~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i  509 (539)
T PLN02590        434 VNLAKHFEDYVAQDPSFEVVT-TR---YFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAV  509 (539)
T ss_pred             HHHHHHHHHHHhcCCCeEEec-CC---ceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEe
Confidence            999999999999877899874 22   2357999875421        11247777777787744322111  2699999


Q ss_pred             cCC-CCHHHHHHHHHHHHHHHHh
Q 043610          407 YNA-MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       407 ~~~-~t~edv~~ll~~L~~~~~~  428 (430)
                      .+. ++++||+.+++.|.+...+
T Consensus       510 ~n~~T~~~dv~~~~~~i~~~a~~  532 (539)
T PLN02590        510 GAPLTEEKHVTEAWQIIQKHASK  532 (539)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHH
Confidence            885 5699999999999987653

>PLN02880 tyrosine decarboxylase

Probab=99.81  E-value=2.4e-18  Score=177.36  Aligned_cols=344  Identities=14%  Similarity=0.046  Sum_probs=204.0

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEe
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEY------SVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~------~vv~~~  140 (430)
                      .-|+.+.+.+++..++ .++..+.....  +..+.+    +..++...++.+++.+.+++++|.|+++      .-++ +
T Consensus        81 ~hP~f~~~~~~~~~~~-~~lad~l~~~~--n~~~~~----~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~-t  152 (490)
T PLN02880         81 QSPNYFAYYPSNSSVA-GFLGEMLSAGL--NIVGFS----WITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVI-Q  152 (490)
T ss_pred             CCCCeeEeccCCCcHH-HHHHHHHHHhh--ccCCcc----cccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEE-c
Confidence            3466777777765444 44444433322  222221    1234566778889999999999998632      2344 5


Q ss_pred             CcHHHHHHHHHhhc----CC------CCCcEEEE-eCChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc-
Q 043610          141 GGATTQFAAVPLNL----CT------PNDPVDYI-VTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE-  204 (430)
Q Consensus       141 ~gaT~a~~~~~~sl----~~------~gd~vl~~-~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~-  204 (430)
                      +|||+++..++...    ++      ...-++++ +..|++.  .+.+.-+|    .++.|+.+.+  .....|+++|+ 
T Consensus       153 sggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv--~Kaa~~lGlg~~~v~~Vp~d~~--~~~~md~~~L~~  228 (490)
T PLN02880        153 GTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSAL--QKACQIAGIHPENCRLLKTDSS--TNYALAPELLSE  228 (490)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHH--HHHHHHcCCCHHHEEEeecCCC--cCCcCCHHHHHH
Confidence            88999986544331    11      11223333 2345542  23344445    3567777531  12257888876 


Q ss_pred             -cCC------CccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-----cc---ccccEEEeCCCcc
Q 043610          205 -QNP------DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV-----DV---TRFGVIYAGAQKN  266 (430)
Q Consensus       205 -i~~------~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i-----dl---~~~d~~~~s~~K~  266 (430)
                       +..      .+-+|+.+...|.+|.+.|  +|+++ +++|+|++||++++.+....     .+   ...|.++.++|||
T Consensus       229 ~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKw  308 (490)
T PLN02880        229 AISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKW  308 (490)
T ss_pred             HHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhh
Confidence             422      2457888888999999999  89996 78999999999998775532     23   3458999999999


Q ss_pred             cc-CCccEEEEEcHHH--HhccCCCCCccccccchhhcC---CCCCCccH---HHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610          267 VG-PSGVTIVIVRKDL--LGNAQDKTPLMLDYKIHDENN---SLYNTPPC---YCIYMCGLVFEYLLELGGLNEVEKMNR  337 (430)
Q Consensus       267 ~g-p~G~g~l~v~~~~--~~~~~~~~p~~~~~~~~~~~~---~~~~T~~~---~~~~a~~~al~~l~~~~g~~~v~~~~~  337 (430)
                      ++ |.|+|++++++..  ++.+. ..+.|+........+   ....+...   +....+..+|+.+-. .|+.+..++..
T Consensus       309 l~~P~~~g~llvr~~~~l~~~~~-~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~-~g~~~~i~~~~  386 (490)
T PLN02880        309 FLTNFDCSLLWVKDRNALIQSLS-TNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGV-ENLQSYIRNHI  386 (490)
T ss_pred             cCCCccEEEEEEeCHHHHHHHHc-cCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCH-HHHHHHHHHHH
Confidence            96 9999999998532  12221 122222110000000   00001100   111223334444321 24555555555


Q ss_pred             HHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchh--------HHHHHHHHHcCCeecCCC--CCCCeeEEeec
Q 043610          338 KKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLE--------AEFVKEAAKEKMVQLKGH--RSVGGMRASIY  407 (430)
Q Consensus       338 ~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~--------~~~~~~L~~~Gi~~~~g~--~~~g~iRis~~  407 (430)
                      ++++++.+.|++..+++++. ++  .. .+++|++++...+        .++.++|.+.|-+.....  ....++|++++
T Consensus       387 ~lA~~~~~~l~~~~~~el~~-~~--~~-~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~  462 (490)
T PLN02880        387 KLAKEFEQLVAQDSRFEVVT-PR--IF-SLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVG  462 (490)
T ss_pred             HHHHHHHHHHhcCCCEEEec-CC--ce-EEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEec
Confidence            99999999998877898874 22  23 4789998642111        246666766665533211  11237999999


Q ss_pred             CCCC-HHHHHHHHHHHHHHHHh
Q 043610          408 NAMP-LAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       408 ~~~t-~edv~~ll~~L~~~~~~  428 (430)
                      +++| ++|++++++.|+++.++
T Consensus       463 n~~tt~~di~~~~~~i~~~~~~  484 (490)
T PLN02880        463 APLTEERHVTAAWKVLQDEASK  484 (490)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHH
Confidence            9766 69999999999887653

>PLN02672 methionine S-methyltransferase

Probab=99.81  E-value=1.9e-17  Score=180.69  Aligned_cols=322  Identities=11%  Similarity=0.126  Sum_probs=209.0

Q ss_pred             CCceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC--cEEEEEeCcHH
Q 043610           69 DRVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE--YSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~--~~vv~~~~gaT  144 (430)
                      +.++.+..  .+.++|+.+++++.+.+.+..        .....++   ..+.+++.+++.+|.+.+  .+|++ ++|++
T Consensus       697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~~~--------~s~g~pd---lr~aLa~~la~~~Gv~~d~~e~IIv-t~Gs~  764 (1082)
T PLN02672        697 SSLIHMDVDESFLPVPSAVKASIFESFVRQN--------ISESETD---PRPSILQFIKSNYGFPTDSCTEFVY-GDTSL  764 (1082)
T ss_pred             CCEEEEeCCCCCCCCCHHHHHHHHHHHhhcC--------CCCCChH---HHHHHHHHHHHHhCcCCCCCCEEEE-eCCHH
Confidence            34555555  446789999999988764310        1111223   357888999999898643  25655 58899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecC-C
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANE-T  219 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~-t  219 (430)
                      +++..++..+++|||+|++..+.+..+.  ..++..| +++.++..++  .+..+|+++++  +.+ +.++|++++++ |
T Consensus       765 elL~lll~aLl~pGD~VLVp~PtY~~Y~--~~a~~~Ga~vv~Vpl~~e--~gf~lD~d~Le~al~~~~~~~I~L~nPnhN  840 (1082)
T PLN02672        765 ALFNKLVLCCVQEGGTLCFPAGSNGTYV--SAAKFLKANFRRIPTKSS--DGFKLTAKTLASTLETVKKPWVYISGPTIN  840 (1082)
T ss_pred             HHHHHHHHHHcCCCCEEEEeCCChHHHH--HHHHHcCCEEEEEecccc--cCCCCCHHHHHHHhccCCCCEEEEECcCCC
Confidence            9999999999999999998776655543  3466678 8888887532  24457777787  544 45689999997 9


Q ss_pred             CccccCC--CCcc---c-cCCCcEEEEeccCc---CCCCc---ccc-------cc----cc-EEEeCCCccccCCc--cE
Q 043610          220 IHGVEFK--EYPS---A-KNSTGILVADMSSN---FCSKP---VDV-------TR----FG-VIYAGAQKNVGPSG--VT  273 (430)
Q Consensus       220 ~tG~~~p--ei~~---~-~~~g~~lvvD~a~s---~G~~~---idl-------~~----~d-~~~~s~~K~~gp~G--~g  273 (430)
                      |||.+++  ++.+   + +++|+++++|++++   +...+   .++       +.    .. +++.|++|.++.+|  +|
T Consensus       841 PTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIG  920 (1082)
T PLN02672        841 PTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFG  920 (1082)
T ss_pred             CcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHhe
Confidence            9999999  4444   3 57899999999985   22111   111       11    12 56789999999889  99


Q ss_pred             EEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHHHHHHH
Q 043610          274 IVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE-----LGGLNEVEKMNRKKAELLYNVI  347 (430)
Q Consensus       274 ~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~-----~~g~~~v~~~~~~l~~~l~~~l  347 (430)
                      |+++++ ++++.+... .   .          ...+.....+++..++..+..     ...+.+.++.+++.++++.+.|
T Consensus       921 ylIap~~eLi~~l~~~-~---~----------~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L  986 (1082)
T PLN02672        921 FLALNDSVLIDAFHSA-P---G----------LSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETL  986 (1082)
T ss_pred             eEEeCCHHHHHHHHHh-h---h----------hcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999864 476654321 0   0          011111233444444432210     0124566777899999999999


Q ss_pred             HccCCceecCCCCCCCccceEEEEcCC----------C------chh-HHHHHHHHH-cCCeecCCCC--CCCeeEEeec
Q 043610          348 DGSNGFYKCPVEKSVRSFMNVPFTLEK----------S------DLE-AEFVKEAAK-EKMVQLKGHR--SVGGMRASIY  407 (430)
Q Consensus       348 ~~~~G~~~~~~~~~~rs~~iv~f~~~~----------~------~~~-~~~~~~L~~-~Gi~~~~g~~--~~g~iRis~~  407 (430)
                      .+ .|+.+.+  +  .+...+.+.++.          .      +.+ .+|.++|.+ .||.+.+|..  ..+++||+++
T Consensus       987 ~~-~Gi~v~~--P--eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa 1061 (1082)
T PLN02672        987 EA-CGWDVLE--P--QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA 1061 (1082)
T ss_pred             HH-CCCeEec--C--CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec
Confidence            97 6876543  1  122222222210          0      122 378888865 4999988743  3568999998


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 043610          408 NAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       408 ~~~t~edv~~ll~~L~~~~~  427 (430)
                      .  +++++++.++.|+++..
T Consensus      1062 ~--~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672       1062 L--EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred             C--CHHHHHHHHHHHHHHHH
Confidence            5  78899999999998754

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.81  E-value=1.8e-18  Score=174.06  Aligned_cols=277  Identities=12%  Similarity=0.064  Sum_probs=177.9

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HHH-HHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AFK-EAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~~-~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.+++++|.+.   .+++ +||+.++..++.+++++||+|++....+.+.. .+. .+++.| ++..+.      
T Consensus        63 ~~~Le~~lA~l~G~~~---al~~-~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~------  132 (386)
T PRK06767         63 VKLFEERMAVLEGGEE---ALAF-GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCD------  132 (386)
T ss_pred             hHHHHHHHHHHhCCCc---EEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeC------
Confidence            4578899999999753   3444 57789999999898999999987654433221 111 223334 322221      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCccc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNV  267 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~  267 (430)
                         ..|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+....++. ..|+++.|++|++
T Consensus       133 ---~~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l  209 (386)
T PRK06767        133 ---METEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYI  209 (386)
T ss_pred             ---CCCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCccee
Confidence               23556665  6789999999999999999999  78886 68899999999987554333332 2389999999999


Q ss_pred             cCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          268 GPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       268 gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      +..|   .|+++.+++.++......  ..         ...+..+.+..+.+..+|+      -+..+.++..+++.++.
T Consensus       210 ~g~g~~~gG~v~~~~~~i~~~~~~~--~~---------~~g~~~~~~~a~l~~~~L~------tl~~r~~~~~~~a~~la  272 (386)
T PRK06767        210 GGHGDVVAGVTICKTRALAEKIRPM--RK---------DIGGIMAPFDAWLLLRGLK------TLAVRMDRHCDNAEKIV  272 (386)
T ss_pred             cCCCCceeEEEEeChHHHHHHHHHH--HH---------HhCCCCCHHHHHHHHcCCC------cHHHHHHHHHHHHHHHH
Confidence            6545   488999988776531100  00         0112233333333322332      34567788889999999


Q ss_pred             HHHHccCCceecC-CCCC------CCccceEEEEcCCCchhH-HHHHHHHHcCCeecCC-------------CC------
Q 043610          345 NVIDGSNGFYKCP-VEKS------VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKG-------------HR------  397 (430)
Q Consensus       345 ~~l~~~~G~~~~~-~~~~------~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g-------------~~------  397 (430)
                      ++|.+.+++..+. +..+      ....++++|.+++...+. +|+++|+..++....|             +.      
T Consensus       273 ~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~  352 (386)
T PRK06767        273 SFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAEL  352 (386)
T ss_pred             HHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHH
Confidence            9999877776431 1100      112468999987422223 6888887655442211             10      


Q ss_pred             ------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          398 ------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       398 ------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                            ..+-||+|++.    ||++.|++-|+..+.
T Consensus       353 ~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~  384 (386)
T PRK06767        353 RQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALK  384 (386)
T ss_pred             HHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence                  13469999996    667777777766554

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.80  E-value=1.4e-17  Score=167.26  Aligned_cols=317  Identities=12%  Similarity=0.095  Sum_probs=203.2

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd  159 (430)
                      +.++-++++.+.+..    |.     ...++    ...+.++.+++++|++   .++++ +|+|+|+.+++.++ +++||
T Consensus        12 ~~~~e~~~~~~~l~~----~~-----~~~g~----~~~~le~~la~~~g~~---~~v~~-~sgt~al~lal~al~~~~Gd   74 (379)
T PRK11658         12 MGDEELAAVKEVLRS----GW-----ITTGP----KNQALEQAFCQLTGNQ---HAIAV-SSATAGMHITLMALGIGPGD   74 (379)
T ss_pred             CCHHHHHHHHHHHHc----CC-----ccCCH----hHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHcCCCCCC
Confidence            455667777776642    11     11122    3568899999999986   35555 78999999999998 78999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN  233 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~  233 (430)
                      +|++....+.+..  ..+...| +++.++...   .+..+|+++++  +++++++|+.+|   ++|...|  +|.++ ++
T Consensus        75 ~Viv~~~~~~~~~--~~~~~~G~~~v~vd~~~---~~~~~d~~~l~~~i~~~tkav~~~~---~~G~~~d~~~i~~~a~~  146 (379)
T PRK11658         75 EVITPSLTWVSTL--NMIVLLGATPVMVDVDR---DTLMVTPEAIEAAITPRTKAIIPVH---YAGAPADLDAIRAIGER  146 (379)
T ss_pred             EEEECCCcHHHHH--HHHHHcCCEEEEEecCC---CcCCcCHHHHHHhcccCCeEEEEeC---CCCCcCCHHHHHHHHHH
Confidence            9998777766542  3445668 888887743   22247888887  788999887665   4799988  78886 68


Q ss_pred             CCcEEEEeccCcCCCCcc--ccccc--cEEEeCCCccc-cCCccEEEEEc-HHHHhccCCCC--Ccccc-ccc--hhhc-
Q 043610          234 STGILVADMSSNFCSKPV--DVTRF--GVIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKT--PLMLD-YKI--HDEN-  301 (430)
Q Consensus       234 ~g~~lvvD~a~s~G~~~i--dl~~~--d~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~--p~~~~-~~~--~~~~-  301 (430)
                      +|+++++|++|++|....  ++..+  +++.++.+|++ ++.| |+++.+ +++.++++...  -...+ +..  .... 
T Consensus       147 ~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~  225 (379)
T PRK11658        147 YGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEG-GLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAP  225 (379)
T ss_pred             cCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCc-eEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCC
Confidence            999999999999987643  24444  46778888988 4555 555554 67666543210  00000 000  0000 


Q ss_pred             ---CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-CC-CCCccceEEEEcCCC-
Q 043610          302 ---NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EK-SVRSFMNVPFTLEKS-  375 (430)
Q Consensus       302 ---~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~-~~rs~~iv~f~~~~~-  375 (430)
                         ....|+-  +.+..+.+|+...+. .+++++.++.++++++++++|.+. ++..+.. .. ...+...+++.++.. 
T Consensus       226 ~~~~~~~G~n--~~~~~l~AAl~~~ql-~~l~~~~~~r~~~a~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (379)
T PRK11658        226 QAEVLTPGYK--YNLADINAAIALVQL-AKLEALNARRREIAARYLQALADL-PFQPLSLPAWPHQHAWHLFIIRVDEER  301 (379)
T ss_pred             cceeeccccc--cCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCC-CCccCcCCCCCCceeEEEEEEEECCcc
Confidence               0011221  112345555554442 378999999999999999999863 4333221 11 122334566666531 


Q ss_pred             -chhH-HHHHHHHHcCCeecCCC-------------C----------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          376 -DLEA-EFVKEAAKEKMVQLKGH-------------R----------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       376 -~~~~-~~~~~L~~~Gi~~~~g~-------------~----------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       +.+. ++.+.|+++||.....+             .          ....+.+-++...+++|+++++++|++++.
T Consensus       302 ~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~  378 (379)
T PRK11658        302 CGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIAG  378 (379)
T ss_pred             ccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence             2233 79999999998643110             0          012477777888999999999999999753

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.80  E-value=2.4e-17  Score=157.90  Aligned_cols=316  Identities=13%  Similarity=0.097  Sum_probs=216.4

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      .+.||.|++++.+.++.    |  +|+-...+.   +.++.+....++-.+-  .++ .++++ .|.--++..+++.+-+
T Consensus        37 f~~pp~i~~Al~~rvdh----G--vfGY~~~~~---~~~~ai~~w~~~r~~~~i~~e-~i~~~-p~VVpgi~~~I~~~T~  105 (388)
T COG1168          37 FPTPPEIIEALRERVDH----G--VFGYPYGSD---ELYAAIAHWFKQRHQWEIKPE-WIVFV-PGVVPGISLAIRALTK  105 (388)
T ss_pred             CCCCHHHHHHHHHHHhc----C--CCCCCCCCH---HHHHHHHHHHHHhcCCCCCcc-eEEEc-CcchHhHHHHHHHhCc
Confidence            67899999999998863    2  111112222   3556777888887775  343 56665 7899999999999999


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc---cCCCccEEEEeecCCCccccCC--CC--
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICANETIHGVEFK--EY--  228 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~~t~tG~~~p--ei--  228 (430)
                      |||.|++..+-|.  .++...+..| ++...+..++ +....+|+++|+   ..++++++++|+++||+|.+..  |+  
T Consensus       106 ~gd~Vvi~tPvY~--PF~~~i~~n~R~~i~~pL~~~-~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~  182 (388)
T COG1168         106 PGDGVVIQTPVYP--PFYNAIKLNGRKVIENPLVED-DGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRK  182 (388)
T ss_pred             CCCeeEecCCCch--HHHHHHhhcCcEEEecccccc-CCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHH
Confidence            9999997655443  3556666777 7777777643 233457999998   4667899999999999999999  44  


Q ss_pred             -ccc-cCCCcEEEEeccCc----CCCCccccc-------cccEEEeCCCccccCCc--cEEEEEcHH-HHhccCCCCCcc
Q 043610          229 -PSA-KNSTGILVADMSSN----FCSKPVDVT-------RFGVIYAGAQKNVGPSG--VTIVIVRKD-LLGNAQDKTPLM  292 (430)
Q Consensus       229 -~~~-~~~g~~lvvD~a~s----~G~~~idl~-------~~d~~~~s~~K~~gp~G--~g~l~v~~~-~~~~~~~~~p~~  292 (430)
                       .++ ++||+++|.|+.|+    .|+..+.+.       +.-+.+.|++|.|+.+|  ++.++++.+ +.++..+     
T Consensus       183 i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~-----  257 (388)
T COG1168         183 IAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLK-----  257 (388)
T ss_pred             HHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHH-----
Confidence             444 59999999999986    232333222       22377888999999888  777777644 4343111     


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEEEE
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~  371 (430)
                          ....  ...+.+|.+++.|..+|.+.-.  .-++++.+.++..++++.+.+.+. +++++..  ++  +--..-+.
T Consensus       258 ----~l~~--~~~~~~n~lg~~A~~aAY~~G~--~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~--p~--gTYL~WLD  325 (388)
T COG1168         258 ----RLKR--NGLHGPSALGIIATEAAYNQGE--PWLDELLEYLKDNRDYVADFLNKHLPGVKVTE--PQ--GTYLAWLD  325 (388)
T ss_pred             ----HHHH--hcCCCCchHHHHHHHHHHHhch--HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec--CC--Cceeeeee
Confidence                1111  1225789999999999998543  257899999999999999999985 3777653  21  11122233


Q ss_pred             cCCCchhH-HHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          372 LEKSDLEA-EFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       372 ~~~~~~~~-~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +..-+++. ++.+.| .+.+|...+|+.    ..|.+|+.+..  +.+-+++.++.|+..++
T Consensus       326 ~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac--pr~~L~eal~ri~~al~  385 (388)
T COG1168         326 CRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC--PRAILEEALERLKRALK  385 (388)
T ss_pred             ccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC--CHHHHHHHHHHHHHHHh
Confidence            33333444 677765 456888777653    24579999976  67777777777766554

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.80  E-value=5.1e-18  Score=169.56  Aligned_cols=271  Identities=16%  Similarity=0.107  Sum_probs=178.5

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH-H-HHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA-F-KEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~-~-~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.++++.  .+  +.+++ +||++|+..++.+++++||+|++..+++++... . ...++.| +++.++..+   
T Consensus        53 ~~~Le~~lA~l~--~~--~~v~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~---  124 (366)
T PRK07582         53 WRALEAALGELE--GA--EALVF-PSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAG---  124 (366)
T ss_pred             HHHHHHHHHHHc--CC--CEEEE-CCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCC---
Confidence            347778888888  33  34555 678899999999999999999988777766532 2 1234567 777666532   


Q ss_pred             CCCCCCccccccCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc--CCCCccccccccEEEeCCCccc-
Q 043610          194 YTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQKNV-  267 (430)
Q Consensus       194 ~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~K~~-  267 (430)
                      .+     +  .+.+++++|++++++|++|.+.|  +|.++ +++|++++||++++  .|..|+++. .|+++.|++||+ 
T Consensus       125 ~~-----~--~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~~g-~Divv~S~sK~l~  196 (366)
T PRK07582        125 MA-----E--AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLELG-ADLVVASDTKALT  196 (366)
T ss_pred             hH-----H--HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchhcC-CcEEEeccccccc
Confidence            11     0  23468999999999999999999  78886 68899999999864  677777753 489999999999 


Q ss_pred             cCCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          268 GPSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       268 gp~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      |++|  .|+++.+ +++++.+..       +..     ....+++....+.+...|+      -++.+.+++.+.+..+.
T Consensus       197 G~~g~~~G~v~~~~~~l~~~l~~-------~~~-----~~g~~~~~~~a~l~~r~l~------tl~~R~~~~~~na~~la  258 (366)
T PRK07582        197 GHSDLLLGYVAGRDPELMAAVER-------WRL-----LAGAIPGPFEAWLAHRSLG------TLGLRFARQCANALAVA  258 (366)
T ss_pred             CCCCeeEEEEEcCcHHHHHHHHH-------HHH-----HhCCCCCHHHHHHHHhccc------cHHHHHHHHHHHHHHHH
Confidence            6888  5888875 566554321       110     0112444444443333333      24566677888888999


Q ss_pred             HHHHccCCceec--CCCCCC-----------CccceEEEEcCCCchhHHHHHHHHHcCCeec---CCC------------
Q 043610          345 NVIDGSNGFYKC--PVEKSV-----------RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQL---KGH------------  396 (430)
Q Consensus       345 ~~l~~~~G~~~~--~~~~~~-----------rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~---~g~------------  396 (430)
                      ++|.+.+.+..+  |.-+++           ...++++|.+++   ..+..+.+.+.+++..   .|.            
T Consensus       259 ~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~---~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~  335 (366)
T PRK07582        259 ELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD---AAAAERFVAASRLVVAATSFGGVHTSADRRARWG  335 (366)
T ss_pred             HHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC---HHHHHHHHHhCCcceecccCCCccchhhhHHHcC
Confidence            999876554322  211111           134689999863   2244455555555431   111            


Q ss_pred             --CCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          397 --RSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       397 --~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                        ...+.||+|++..+.++.|+.|.++|+.
T Consensus       336 ~~~~~~liR~svGlE~~~dli~dl~~al~~  365 (366)
T PRK07582        336 DAVPEGFVRLSCGIEDTDDLVADLERALDA  365 (366)
T ss_pred             CCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence              1134699999987777778887777754

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.80  E-value=1.9e-17  Score=167.70  Aligned_cols=329  Identities=13%  Similarity=0.124  Sum_probs=194.0

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh---CCCCCcEEEEEeCcH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL---NIPQEYSVLFLQGGA  143 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~---g~~~~~~vv~~~~ga  143 (430)
                      +.++.++.|-  .++++.|.+++.+.+.+......    ...+.+.  .-..++|+.+++++   +++++ +|++ ++|+
T Consensus        33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~Y~p~--~g~~~lr~aia~~~~~~~~~~d-~I~i-t~Ga  104 (402)
T TIGR03542        33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEET----FRGYGPE--QGYPFLREAIAENDYRGRIDPE-EIFI-SDGA  104 (402)
T ss_pred             CCeEEcCCCCCCCCCCHHHHHHHHHHHhccccccc----ccCCCCC--CCCHHHHHHHHHHHHhcCCCHH-HEEE-CCCc
Confidence            4556666544  34678899998887654211000    0111111  11235566666655   57665 7776 4789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCC------------ceEEecCCCCcCCCCCCccccccCCCccE
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCN------------PQVIWSGKAEKYTKIPNFDALEQNPDAKY  211 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~------------~~~v~~~~~~~~g~~~d~~~l~i~~~~~l  211 (430)
                      ++++..+ ..++.+||+|++..+++..+.  ..++..|.            +..++..+.  .+..++   +...+++++
T Consensus       105 ~~al~~l-~~l~~~gd~Vlv~~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~v~~~~~--~~~~~~---~~~~~~~~~  176 (402)
T TIGR03542       105 KCDVFRL-QSLFGSDNTVAVQDPVYPAYV--DSNVMAGRAGVLDDDGRYSKITYLPCTKE--NNFIPD---LPEEPKIDI  176 (402)
T ss_pred             HHHHHHH-HHhcCCCCEEEEeCCCCcchH--HHHHHcCCccccccccccceEEEeecchh--hCCCCC---ccccCCceE
Confidence            9999885 566789999998887765542  34444442            222232211  111122   111257899


Q ss_pred             EEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---C-Ccccc---ccc-c--EEEeCCCccccCCc--cE
Q 043610          212 LHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---S-KPVDV---TRF-G--VIYAGAQKNVGPSG--VT  273 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~-~~idl---~~~-d--~~~~s~~K~~gp~G--~g  273 (430)
                      |++++++||||..++  +   |.++ +++|+++++|++++--   . .+..+   +.. +  +++.|++|.+|.+|  +|
T Consensus       177 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG  256 (402)
T TIGR03542       177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLG  256 (402)
T ss_pred             EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceE
Confidence            999999999999999  3   4443 5789999999987521   1 12222   222 2  66899999999889  89


Q ss_pred             EEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc
Q 043610          274 IVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF  353 (430)
Q Consensus       274 ~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~  353 (430)
                      +++++++++........  -.+..  .......+.+.+.+.++..+++.-. ..-+....+++++.++++.+.|++ .|+
T Consensus       257 ~~i~~~~l~~~~~~~~~--~~~~~--~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~L~~-~~~  330 (402)
T TIGR03542       257 WTVVPKELTYADGHSVI--QDWER--RQCTKFNGASYPVQRAAEAAYAGEG-LQPILEAISYYMENARILRKALEA-AGF  330 (402)
T ss_pred             EEEecHHHhhcchhhHH--HHHHH--HhhhcccCCCHHHHHHHHHHHcCcc-hhHHHHHHHHHHHHHHHHHHHHHh-cCc
Confidence            99999887622100000  00000  0001123456666666555553100 001334556777888889999986 576


Q ss_pred             eecCCCCCCCccceEEEEcCCCchhHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          354 YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       354 ~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .+.+   +..+ .-+.+.+++...+.++.+.|. ++||.+.+|..    ..+++||++..  +++++++.++.|++.
T Consensus       331 ~~~~---~~~~-~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~  401 (402)
T TIGR03542       331 KVYG---GEHA-PYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG--KRENIVEACERIKEA  401 (402)
T ss_pred             eecC---CCce-eEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHhh
Confidence            5432   1122 234567764212337888875 57999888642    14689999754  789999999888765

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.80  E-value=2.1e-17  Score=168.10  Aligned_cols=290  Identities=12%  Similarity=0.102  Sum_probs=179.8

Q ss_pred             HHHHHHHHHHHHHhC--CCCCcEEEEEeCcHHHHHHHHHhhcCC-----CCCcEEE-EeCChhHHHHHHHHHHh----C-
Q 043610          115 SIIEKAESDLRALLN--IPQEYSVLFLQGGATTQFAAVPLNLCT-----PNDPVDY-IVTGSWGDKAFKEAQKF----C-  181 (430)
Q Consensus       115 ~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT~a~~~~~~sl~~-----~gd~vl~-~~~g~~~~~~~~~a~~~----g-  181 (430)
                      ++.+.+.+.+++..|  ++++ +|++ ++|+++++..++..+++     +||.|++ ..+.+.++..  .++..    + 
T Consensus        78 ~LR~aia~~~~~~~g~~v~~~-~I~i-t~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~--~~~~~~~~~~~  153 (416)
T PRK09440         78 ELIEALAALLNERYGWNISPQ-NIAL-TNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYAD--AGLEEDLFVSY  153 (416)
T ss_pred             HHHHHHHHHHHHHhCCCCChh-hEEE-ccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHH--HhhccCceeec
Confidence            334445555555545  4555 6666 58899999999888874     5889988 4666665432  12111    1 


Q ss_pred             CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCcc---c
Q 043610          182 NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKPV---D  252 (430)
Q Consensus       182 ~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~i---d  252 (430)
                      ...+++...+ +++..+|++++++.++++++++++++||||.+++  +   |.++ +++|+++++|+++......+   +
T Consensus       154 ~~~~~~~~~~-~~~~~~d~~~l~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~  232 (416)
T PRK09440        154 RPNIELLPEG-QFKYHVDFEHLHIDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSE  232 (416)
T ss_pred             cccccccccc-ccccCCCHHHcccCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhh
Confidence            2222333211 1122367777765567899999999999999999  3   4443 57899999999986321111   1


Q ss_pred             ccc--cc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          253 VTR--FG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       253 l~~--~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                      ...  .+  +++.|++|. +.+|  +||++.++++++.+.....            ....+++.+.+.++..+|+.-.-.
T Consensus       233 ~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~~~~~~------------~~~~~~s~~~q~~~~~~l~~~~~~  299 (416)
T PRK09440        233 ATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEALSNMNG------------IISLAPGRLGPAIAAEMIESGDLL  299 (416)
T ss_pred             cCccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHHHHHHH------------HhccCCCcHHHHHHHHHhccchHH
Confidence            111  22  678999996 8778  8999999888776432110            111355667777777777421000


Q ss_pred             cCH-HHHHHHHHHHHHHHHHHHHccC---CceecCCCCCCCccceEEEEcCCC-chhHHHHHHHHHcCCeecCCCCC---
Q 043610          327 GGL-NEVEKMNRKKAELLYNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEKS-DLEAEFVKEAAKEKMVQLKGHRS---  398 (430)
Q Consensus       327 ~g~-~~v~~~~~~l~~~l~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~~-~~~~~~~~~L~~~Gi~~~~g~~~---  398 (430)
                      .-+ +.++++++++++.+++.|.+.+   ++.+..  + . ....+.+.+++. ..+.++.+.|.++||.+.+|...   
T Consensus       300 ~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~--p-~-gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~  375 (416)
T PRK09440        300 RLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHK--P-E-GAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPG  375 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEec--C-C-CceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCC
Confidence            001 2245666777777777776532   333221  1 1 222344566541 12347888898899998876321   


Q ss_pred             --------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          399 --------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       399 --------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                              .+++|||+..  ++++++++++.|++++++
T Consensus       376 ~~~~~~~~~~~iRis~~~--~~~~l~~~i~~l~~~~~~  411 (416)
T PRK09440        376 LDEDWPHAHQCIRMNYVQ--DDEEIEKGIAILAEEVEK  411 (416)
T ss_pred             CccccCCcCceEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence                    2479999974  689999999999988765

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.80  E-value=9.1e-17  Score=162.52  Aligned_cols=313  Identities=12%  Similarity=0.043  Sum_probs=203.9

Q ss_pred             CceeecCCC---CCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGP---ANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp---~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      ..++|+..-   -...|.+++++.+.+.+|. +.+.|..-     .......+++++.|++++|.++   .+++ ++|..
T Consensus       103 ~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~-----~G~~~~h~~LE~~LA~f~g~e~---all~-sSGy~  173 (476)
T PLN02955        103 KLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALI-----CGYTTYHRLLESSLADLKKKED---CLVC-PTGFA  173 (476)
T ss_pred             eEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCcc-----ccChHHHHHHHHHHHHHHCCCc---EEEE-CChHH
Confidence            356666633   2367789999998887763 22333221     1223466789999999999875   4555 67999


Q ss_pred             HHHHHHhhcC------------CCCCc-EEEEeCChhHHHHHHHHHHh----CCceEEecCCCCcCCCCCCccccc--c-
Q 043610          146 QFAAVPLNLC------------TPNDP-VDYIVTGSWGDKAFKEAQKF----CNPQVIWSGKAEKYTKIPNFDALE--Q-  205 (430)
Q Consensus       146 a~~~~~~sl~------------~~gd~-vl~~~~g~~~~~~~~~a~~~----g~~~~v~~~~~~~~g~~~d~~~l~--i-  205 (430)
                      |+..++..+.            ..++. +++.+..  .|.......++    |...++...    +   -|+++|+  + 
T Consensus       174 AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~--~HaSI~dG~~ls~~~~~a~~~~f~----H---ND~~~Le~~L~  244 (476)
T PLN02955        174 ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDAL--NHASIIDGVRLAERQGNVEVFVYR----H---CDMYHLNSLLS  244 (476)
T ss_pred             HHHHHHHHHhhccccccccccccCCCCcEEEEecc--chHHHHHHHHhccccCCceEEEeC----C---CCHHHHHHHHH
Confidence            9998887762            12333 2333432  22222223222    223333321    2   3556654  2 


Q ss_pred             --CCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------ccc-ccccEEEeCCCccccCC
Q 043610          206 --NPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VDV-TRFGVIYAGAQKNVGPS  270 (430)
Q Consensus       206 --~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------idl-~~~d~~~~s~~K~~gp~  270 (430)
                        ..+.++|++-.+.+..|.+.|  +|.++ +++|++++||++|++|..-         +.+ .+.|++++++.|.+|..
T Consensus       245 ~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~  324 (476)
T PLN02955        245 SCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH  324 (476)
T ss_pred             hCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc
Confidence              334567777778899999999  78887 5899999999999977542         222 35579999999999987


Q ss_pred             ccEEEEEcHHHHhccCCCCCccccccchhhcCCCCC-CccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          271 GVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYN-TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       271 G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      | ||+..+++.++.+......           ..++ ..+++...++.++++.+.+  + ...+++++++.+++++.   
T Consensus       325 G-Gfi~gs~~~~~~l~~~~~~-----------~ifStalpp~~aaa~laal~l~~~--~-~~~r~~L~~n~~~fr~~---  386 (476)
T PLN02955        325 G-GFIACSKKWKQLIQSRGRS-----------FIFSTAIPVPMAAAAYAAVVVARK--E-KWRRKAIWERVKEFKAL---  386 (476)
T ss_pred             C-ceeecHHHHHHHHHHhCCC-----------CeecccccHHHHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHh---
Confidence            8 8999998877664321111           1123 3445566667788887653  2 45778888888888873   


Q ss_pred             cCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC---CCCCC--CeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---GHRSV--GGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g~~~~--g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                       .|+.+       .++ |+++.+.+.....++.++|.++||.+..   .....  ..+||++...++++||++++++|++
T Consensus       387 -~G~~~-------~sP-I~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~  457 (476)
T PLN02955        387 -SGVDI-------SSP-IISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSS  457 (476)
T ss_pred             -cCCCC-------CCC-EEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHH
Confidence             35542       254 6777776522222688999999999643   11222  3699999999999999999999998


Q ss_pred             HHH
Q 043610          425 FQA  427 (430)
Q Consensus       425 ~~~  427 (430)
                      +..
T Consensus       458 ~~~  460 (476)
T PLN02955        458 CLD  460 (476)
T ss_pred             HHh
Confidence            754

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.80  E-value=1.2e-17  Score=167.82  Aligned_cols=316  Identities=12%  Similarity=0.065  Sum_probs=195.5

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd  159 (430)
                      +.++-++++.+.+..    ++    . ..++    ..++.|+.+++++|++.   .+++ +|+|+|+..++.++ +++||
T Consensus         8 ~~~~~~~~v~~~~~~----~~----~-~~g~----~~~~le~~la~~~g~~~---~v~~-~sgt~al~~~l~al~~~~Gd   70 (380)
T TIGR03588         8 IDQDDIDAVVEVLKS----DF----L-TQGP----TVPAFEEALAEYVGAKY---AVAF-NSATSALHIACLALGVGPGD   70 (380)
T ss_pred             CCHHHHHHHHHHHhc----CC----c-cCCh----hHHHHHHHHHHHHCCCe---EEEE-cCHHHHHHHHHHHcCCCCCC
Confidence            455667777766532    11    0 1122    24678899999999963   3454 57899999999998 78999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----CCccEEEEeecCCCccccCC--CCcc
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----PDAKYLHICANETIHGVEFK--EYPS  230 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~~~~lv~i~~~~t~tG~~~p--ei~~  230 (430)
                      +|++....+.+.  ...++..| +++.++..++  . ..+|+++++  ++    +++++|+++|   ++|...|  +|.+
T Consensus        71 ~Viv~~~~~~~~--~~~~~~~G~~~~~~~~~~~--~-~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~  142 (380)
T TIGR03588        71 RVWTTPITFVAT--ANCALYCGAKVDFVDIDPD--T-GNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAA  142 (380)
T ss_pred             EEEeCCcchHHH--HHHHHHcCCEEEEEecCCC--c-CCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHH
Confidence            999877666543  33455678 8888887432  2 247888887  66    7899988775   4798888  7877


Q ss_pred             c-cCCCcEEEEeccCcCCCCcccc---cc--c-cEEEeCCC--cccc-CCccEEEEE-cHHHHhccCCCCC--ccccccc
Q 043610          231 A-KNSTGILVADMSSNFCSKPVDV---TR--F-GVIYAGAQ--KNVG-PSGVTIVIV-RKDLLGNAQDKTP--LMLDYKI  297 (430)
Q Consensus       231 ~-~~~g~~lvvD~a~s~G~~~idl---~~--~-d~~~~s~~--K~~g-p~G~g~l~v-~~~~~~~~~~~~p--~~~~~~~  297 (430)
                      + +++|+++++|++|++|.. ++.   ..  + |+.++|+|  |+++ +.| |+++. ++++.++++....  ...+...
T Consensus       143 l~~~~~~~lI~D~a~a~g~~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~~~~~~~~~~~g~~~~~~~  220 (380)
T TIGR03588       143 LAKKHGLKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIITTAEG-GAVTTNDEELAERMRLLRSHGITKDPLL  220 (380)
T ss_pred             HHHHcCCEEEEECCCcccCc-cCCEeCCCccccceEEEecCCCCcccccCc-eEEEECCHHHHHHHHHHHHCCCCCCccc
Confidence            6 689999999999999975 222   12  3 78888877  9996 655 55554 5666655321000  0000000


Q ss_pred             h--hhcCCC---CCCc--cH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC-CCccceE
Q 043610          298 H--DENNSL---YNTP--PC-YCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS-VRSFMNV  368 (430)
Q Consensus       298 ~--~~~~~~---~~T~--~~-~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~-~rs~~iv  368 (430)
                      .  ...+..   .++.  |. ..-..+..++..+.   .++.+.++.+++.+++.+.|.+..++.+...... ..++...
T Consensus       221 ~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~---~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  297 (380)
T TIGR03588       221 FEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLK---KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLY  297 (380)
T ss_pred             ccccccCcceeeeeccccccCccHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEE
Confidence            0  000000   0000  00 01111112222232   3688889999999999999987555543321111 1223344


Q ss_pred             EEEcCC-CchhH-HHHHHHHHcCCeecCCC-------------C----------CCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          369 PFTLEK-SDLEA-EFVKEAAKEKMVQLKGH-------------R----------SVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       369 ~f~~~~-~~~~~-~~~~~L~~~Gi~~~~g~-------------~----------~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      ++.++. .+.+. ++.+.|.++||.+...+             .          ....+++.++.+.+++||++++++|+
T Consensus       298 ~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~  377 (380)
T TIGR03588       298 PILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLR  377 (380)
T ss_pred             EEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHH
Confidence            444542 12233 79999999998753211             0          01359999999999999999999999


Q ss_pred             HHH
Q 043610          424 DFQ  426 (430)
Q Consensus       424 ~~~  426 (430)
                      +++
T Consensus       378 ~~~  380 (380)
T TIGR03588       378 KVL  380 (380)
T ss_pred             HhC
Confidence            864

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.79  E-value=1.3e-17  Score=169.05  Aligned_cols=322  Identities=14%  Similarity=0.055  Sum_probs=194.2

Q ss_pred             CCceeecCCC---CCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C--CCCCcEEEE
Q 043610           69 DRVFNFAAGP---ANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N--IPQEYSVLF  138 (430)
Q Consensus        69 ~~~~l~~~gp---~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g--~~~~~~vv~  138 (430)
                      +.+++++.|.   ...+..+.+++.+.+.... ......|....   ...    +.|+.+++++    +  .+++ +|++
T Consensus        29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---G~~----~lR~aia~~~~~~~~~~~~~~-~v~~  100 (404)
T PTZ00376         29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIE---GLQ----SFIEAAQKLLFGEASYALAEK-RIAT  100 (404)
T ss_pred             cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCC---CCH----HHHHHHHHHhcCCCccccccC-eEEE
Confidence            5678888874   2344445555555542211 11111111111   122    3444444443    1  2444 6663


Q ss_pred             -EeCcHHHHHHHHHh---hcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c---CCC
Q 043610          139 -LQGGATTQFAAVPL---NLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q---NPD  208 (430)
Q Consensus       139 -~~~gaT~a~~~~~~---sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i---~~~  208 (430)
                       .+.|+++++..++.   .+++|||+|++.++.++++.  ..++..| +++.++..+++++  .+|++.++  +   .++
T Consensus       101 ~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~--~~~~~~G~~~~~v~l~~~~~~--~~d~~~l~~~~~~~~~~  176 (404)
T PTZ00376        101 VQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHV--NIFKSAGLNVKEYRYYDPKTK--GLDFDGMLEDLRTAPNG  176 (404)
T ss_pred             eeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHcCCceeeccccCcccC--CcCHHHHHHHHHhCCCC
Confidence             34688999887764   56789999998887776653  4566778 8888887322124  36777775  3   355


Q ss_pred             ccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-c--------ccccc-cc--EEEeCCCccccCC
Q 043610          209 AKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-P--------VDVTR-FG--VIYAGAQKNVGPS  270 (430)
Q Consensus       209 ~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-~--------idl~~-~d--~~~~s~~K~~gp~  270 (430)
                      ++++++++++||||..++  +   |.++ +++++++++|+++.--.. .        ..+.. .+  +++.|++|.+|++
T Consensus       177 ~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~  256 (404)
T PTZ00376        177 SVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLY  256 (404)
T ss_pred             CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCccccc
Confidence            778888999999999999  3   4443 588999999998742111 0        11111 12  7889999999988


Q ss_pred             c--cEEEE---EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--Hh--cCHHHHHHHHHHHHH
Q 043610          271 G--VTIVI---VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--EL--GGLNEVEKMNRKKAE  341 (430)
Q Consensus       271 G--~g~l~---v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~~--~g~~~v~~~~~~l~~  341 (430)
                      |  +||++   .++++++.+......+        .....++++...+.++..+|+.-.  +.  .-++.++++++++++
T Consensus       257 GlRvG~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~  328 (404)
T PTZ00376        257 GERIGALHIVCANKEEAANVLSQLKLI--------IRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQ  328 (404)
T ss_pred             ccccceEEEEeCCHHHHHHHHHHHHHH--------HhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9  88873   4666544321000000        001113445566777776664210  00  124556678889999


Q ss_pred             HHHHHHHccCCc----eecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610          342 LLYNVIDGSNGF----YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHRSVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       342 ~l~~~l~~~~G~----~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~~~g~iRis~~~~~t~edv~  416 (430)
                      .+.+.|++. ++    ....  +  .+.  +.+.++   .+.+++++|.++ ||.+.+|    +  |||++. .+.++++
T Consensus       329 ~l~~~L~~~-~~~~~~~~~~--p--~gg--~f~~~~---~~~~~~~~L~~~~~v~v~p~----~--Ris~~~-~~~~~~~  391 (404)
T PTZ00376        329 LLYDELKAL-GSPGDWEHII--N--QIG--MFSFTG---LTKEQVERLIEKYHIYLLDN----G--RISVAG-LTSKNVD  391 (404)
T ss_pred             HHHHHHHhc-CCCCcccccc--c--Cce--EEEecC---CCHHHHHHHHHhCCEeecCC----C--eEEEec-cCHHhHH
Confidence            999999873 43    2211  1  122  222232   234788888665 9998886    2  999964 6899999


Q ss_pred             HHHHHHHHHHH
Q 043610          417 KLVAFMKDFQA  427 (430)
Q Consensus       417 ~ll~~L~~~~~  427 (430)
                      ++++.|++++.
T Consensus       392 ~~~~~l~~~~~  402 (404)
T PTZ00376        392 YVAEAIHDVVR  402 (404)
T ss_pred             HHHHHHHHHHh
Confidence            99999999864

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.79  E-value=4.2e-17  Score=167.08  Aligned_cols=329  Identities=10%  Similarity=0.040  Sum_probs=207.8

Q ss_pred             ccCCCCCceeecCCCC---CCcH----HHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEE
Q 043610           64 QSGQEDRVFNFAAGPA---NLPE----KVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSV  136 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp~---~~~~----~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~v  136 (430)
                      +.....+++++..|..   ..++    .+.+++.+.+..    |...|..   +..    +.++|+.++++++..   ++
T Consensus        31 l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~----g~~~Y~~---~~g----~~~Lreaia~~~~~~---~v   96 (460)
T PRK13238         31 LAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMR----GDEAYAG---SRS----YYRLEDAVKDIFGYP---YT   96 (460)
T ss_pred             HHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHh----CCcccCC---CCC----HHHHHHHHHHHhCCC---cE
Confidence            4455667888877763   2222    356665555532    2211211   112    347778899999975   56


Q ss_pred             EEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC------CcCCCCCCccccc--cC-
Q 043610          137 LFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA------EKYTKIPNFDALE--QN-  206 (430)
Q Consensus       137 v~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~------~~~g~~~d~~~l~--i~-  206 (430)
                      ++ +.|+++|+..++..+++||| |++.. .+|.... ...+..| +++.++..+.      .++...+|+++|+  ++ 
T Consensus        97 v~-t~ggt~A~~~~~~all~pGD-Vii~~-p~~~~~~-~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~  172 (460)
T PRK13238         97 IP-THQGRAAEQILFPVLIKKGD-VVPSN-YHFDTTR-AHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEE  172 (460)
T ss_pred             EE-CCCHHHHHHHHHHHhCCCCC-EEccC-CcccchH-HHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhh
Confidence            65 47899999999999999999 66544 4443221 2234556 8888876431      1232248888887  55 


Q ss_pred             ---CCccEEEEeecCCCcc-ccCC-----CCccc-cCCCcEEEEeccCcCC-----------CCccccc-------c-cc
Q 043610          207 ---PDAKYLHICANETIHG-VEFK-----EYPSA-KNSTGILVADMSSNFC-----------SKPVDVT-------R-FG  257 (430)
Q Consensus       207 ---~~~~lv~i~~~~t~tG-~~~p-----ei~~~-~~~g~~lvvD~a~s~G-----------~~~idl~-------~-~d  257 (430)
                         +++++|++++++|++| ...+     +|.++ +++|++++.|+++.++           ....++.       . .|
T Consensus       173 ~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D  252 (460)
T PRK13238        173 VGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYAD  252 (460)
T ss_pred             cCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCc
Confidence               4799999999999998 7777     35554 5899999999987542           2233322       2 37


Q ss_pred             EEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610          258 VIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM  335 (430)
Q Consensus       258 ~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~  335 (430)
                      ++++|++|.+ +|.| |+++.+ +++.+.++.....+.+       ..++++++...+.|+..+|+...++    ...+.
T Consensus       253 ~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~~g-------~~t~~g~~~~~~~Ala~~l~e~~~~----~~~~~  320 (460)
T PRK13238        253 GLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILYEG-------FPTYGGLAGRDMEALAVGLYEGMDE----DYLAY  320 (460)
T ss_pred             EEEEecccCCCCcce-eEEEcChHHHHHHhhhcccccCC-------cccccCcHHHHHHHHHhhHHHhhCh----HHHHH
Confidence            8999999987 6888 999888 5777766442211111       1244566666778888788654322    22222


Q ss_pred             HHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC-------Cch-hHHHHHHH-HHcCCeecCCC-----C----
Q 043610          336 NRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK-------SDL-EAEFVKEA-AKEKMVQLKGH-----R----  397 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~-------~~~-~~~~~~~L-~~~Gi~~~~g~-----~----  397 (430)
                      ..+.+++|.+.|.+ .|+.+....   .+. -+.+.+..       .+. +.+|+.+| .+.||...++.     +    
T Consensus       321 ~~~~~~~l~~~L~~-~G~~~~~p~---Gg~-~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~  395 (460)
T PRK13238        321 RIGQVEYLGEGLEE-AGVPIQTPA---GGH-AVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKT  395 (460)
T ss_pred             HHHHHHHHHHHHHH-CCCCeEccC---Cce-EEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCC
Confidence            23346889999987 688776311   222 22233321       112 23688876 56799876532     1    


Q ss_pred             ------CCCeeEEeecC-CCCHHHHHHHHHHHHHHHH
Q 043610          398 ------SVGGMRASIYN-AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       398 ------~~g~iRis~~~-~~t~edv~~ll~~L~~~~~  427 (430)
                            ....+|+++.- --|.+.++.+.++|+++.+
T Consensus       396 ~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~  432 (460)
T PRK13238        396 GEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE  432 (460)
T ss_pred             ccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence                  13579999875 2378999999999998764

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.79  E-value=4.1e-17  Score=163.09  Aligned_cols=305  Identities=11%  Similarity=0.029  Sum_probs=192.6

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC---CCCCcEEEEEeCcHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN---IPQEYSVLFLQGGAT  144 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g---~~~~~~vv~~~~gaT  144 (430)
                      .+++++.|-  .+.++.+++++.+....   .+   |...   ....+..+.+.+.+.+..|   ++++ +|++ ++|++
T Consensus        28 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~---Y~~~---~G~~~lr~~ia~~l~~~~~~~~~~~~-~I~i-t~G~~   96 (364)
T PRK07865         28 GIVDLSVGTPVDPVPPVIQEALAAAADA---PG---YPTT---AGTPELREAIVGWLARRRGVTGLDPA-AVLP-VIGSK   96 (364)
T ss_pred             CEEEcCCCCCCCCCCHHHHHHHHHHHhh---CC---CCCc---cCCHHHHHHHHHHHHHHcCCCCCCcc-cEEE-ccChH
Confidence            356666553  23467777777654321   11   1111   1122333455555555545   4454 6665 58899


Q ss_pred             HHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCcc
Q 043610          145 TQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHG  222 (430)
Q Consensus       145 ~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG  222 (430)
                      +++..++..+ +++||+|++..+.+.++.  ..++..| ++..++           ++++++ .+++++|++++++||||
T Consensus        97 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~-----------~~~~l~-~~~~~~v~~~~p~NPtG  162 (364)
T PRK07865         97 ELVAWLPTLLGLGPGDVVVIPELAYPTYE--VGARLAGATVVRAD-----------SLTELG-PQRPALIWLNSPSNPTG  162 (364)
T ss_pred             HHHHHHHHHHcCCCCCEEEECCCCcccHH--HHHHhcCCEEEecC-----------ChhhCC-cccceEEEEcCCCCCCC
Confidence            9999877777 689999998776665543  2344566 543332           112222 25789999999999999


Q ss_pred             ccCC--C---Cccc-cCCCcEEEEeccCcCCCC---ccc-cc------ccc--EEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          223 VEFK--E---YPSA-KNSTGILVADMSSNFCSK---PVD-VT------RFG--VIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       223 ~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~id-l~------~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      .+++  +   |.++ +++|+++++|+++..-..   ++. +.      +.+  +++.|++|.+|.+|  +|+++.+++++
T Consensus       163 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~  242 (364)
T PRK07865        163 RVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALV  242 (364)
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHH
Confidence            9999  3   4443 578999999998763211   111 11      122  78899999998778  89999888887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+....          .  ....+.+...+.++..+|+..   ..++..++++++.++.+++.|.+ .|+.+..  +  
T Consensus       243 ~~~~~~~----------~--~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--  302 (364)
T PRK07865        243 AELLEVR----------K--HAGMMVPAPVQAAMVAALGDD---AHVREQRERYARRRAVLRPALEA-AGFRVDH--S--  302 (364)
T ss_pred             HHHHHHH----------H--hcCCCcCHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHH-cCCcccC--C--
Confidence            7643100          0  011244666777776666531   23567788888999999999987 5765432  1  


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      .+...+.+.++.  ...++.+.|.++||.+.+|..    ..+++||++..  +++++++.++.|+
T Consensus       303 ~~~~~~~~~~~~--~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~~~~~~l~  363 (364)
T PRK07865        303 EAGLYLWATRGE--DCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA--TDERIAAAVERLA  363 (364)
T ss_pred             CccEEEEEeCCC--CHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence            122223334432  223688889999999887642    24589999985  6899999998875

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.79  E-value=1.1e-17  Score=171.14  Aligned_cols=284  Identities=14%  Similarity=0.082  Sum_probs=182.2

Q ss_pred             HHHHHHHHHHhC----CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCC
Q 043610          118 EKAESDLRALLN----IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       118 ~~~r~~la~l~g----~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~  192 (430)
                      +.+.+.+.+++|    ++++ +|++ ++|++++++.++..++.|||.|++..+.+.+.. .....+.| +++.++....+
T Consensus       102 ~aiA~~l~~~~~~~~~v~p~-~Ivi-t~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~-~~~~~~~g~~vv~v~~~~~~  178 (447)
T PLN02607        102 QAMASFMEQIRGGKARFDPD-RIVL-TAGATAANELLTFILADPGDALLVPTPYYPGFD-RDLRWRTGVKIVPIHCDSSN  178 (447)
T ss_pred             HHHHHHHHHhcCCCCCcCHH-HeEE-cCChHHHHHHHHHHhCCCCCEEEEcCCCCcchH-HHHHhcCCcEEEEEeCCCCC
Confidence            344444444444    3454 6766 589999999999988999999998776554432 11222456 66666654322


Q ss_pred             cCCCCCCccccc--cC------CCccEEEEeecCCCccccCC--CCcc---c-cCCCcEEEEeccCcC---CCCcc-cc-
Q 043610          193 KYTKIPNFDALE--QN------PDAKYLHICANETIHGVEFK--EYPS---A-KNSTGILVADMSSNF---CSKPV-DV-  253 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~------~~~~lv~i~~~~t~tG~~~p--ei~~---~-~~~g~~lvvD~a~s~---G~~~i-dl-  253 (430)
                      ++  .+++++++  +.      .++|+|++++++||||.+++  ++.+   + +++++++|+|++++.   +..++ .+ 
T Consensus       179 ~f--~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~  256 (447)
T PLN02607        179 NF--QVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVA  256 (447)
T ss_pred             CC--cCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHH
Confidence            23  46777775  32      47899999999999999999  3444   3 588999999999863   22111 11 


Q ss_pred             --------cc-cc--EEEeCCCccccCCc--cEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHH
Q 043610          254 --------TR-FG--VIYAGAQKNVGPSG--VTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLV  319 (430)
Q Consensus       254 --------~~-~d--~~~~s~~K~~gp~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~a  319 (430)
                              .+ .+  .++.|++|.+|.+|  +|+++. ++++++.+...              ..++.++...+.++...
T Consensus       257 s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~--------------~~~~~~s~~~q~~~~~~  322 (447)
T PLN02607        257 EIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM--------------SSFTLVSSQTQHLLASM  322 (447)
T ss_pred             HHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHH--------------hhcCCCCHHHHHHHHHH
Confidence                    11 12  57799999999889  899987 45554433210              11123344556666656


Q ss_pred             HHH---HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC------chhHHHHHHHH-HcC
Q 043610          320 FEY---LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS------DLEAEFVKEAA-KEK  389 (430)
Q Consensus       320 l~~---l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~------~~~~~~~~~L~-~~G  389 (430)
                      |+.   +.  .-++..++++++.++.+.+.|++ .|+....   + .+..-+.+.+++.      ..+.++.++|. ++|
T Consensus       323 L~d~~~~~--~~l~~~r~~l~~~~~~~~~~L~~-~gi~~~~---~-~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~g  395 (447)
T PLN02607        323 LSDEEFTE--NYIRTNRERLRKRYEMIVQGLRR-AGIECLK---G-NAGLFCWMNLSPLLETPTREGELALWDSILREVK  395 (447)
T ss_pred             hCCchhHH--HHHHHHHHHHHHHHHHHHHHHHh-CCCCccc---C-CeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCC
Confidence            542   11  12466778888888999999986 6775432   1 1223344556421      11225776665 579


Q ss_pred             CeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          390 MVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       390 i~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      |.+.+|..    ..|++||++.. .++++++..++.|++++++
T Consensus       396 V~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~  437 (447)
T PLN02607        396 LNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDR  437 (447)
T ss_pred             EEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence            99988753    36799999984 4578888888888887754

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.79  E-value=3.5e-17  Score=165.64  Aligned_cols=329  Identities=11%  Similarity=0.057  Sum_probs=200.9

Q ss_pred             CCCCceeecCCC--CC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP--AN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-  ..   -+|.|++++.+.+..... .       .+. .+...++++++.++++++.+   .++++ +
T Consensus        29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~-~-------~~~-~~~~~~~~~~~~l~~~~~~~---~~~~~-~   95 (400)
T PTZ00125         29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTL-T-------SRA-FYNDVLGLAEKYITDLFGYD---KVLPM-N   95 (400)
T ss_pred             CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccc-c-------ccc-ccCHHHHHHHHHHHhCCCCC---EEEEe-C
Confidence            344455565543  22   488999999998764211 1       110 01346778889999888753   56665 7


Q ss_pred             cHHHHHHHHHhhcC----------CCCCcEEEEeCChhHHHHHHHHHHhCCceEE---ecCCCCcCCCCCCccccc--cC
Q 043610          142 GATTQFAAVPLNLC----------TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI---WSGKAEKYTKIPNFDALE--QN  206 (430)
Q Consensus       142 gaT~a~~~~~~sl~----------~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v---~~~~~~~~g~~~d~~~l~--i~  206 (430)
                      |||+|++.++....          ..+++|++.+.++++..+.............   +.......-...|+++++  +.
T Consensus        96 SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~  175 (400)
T PTZ00125         96 SGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQ  175 (400)
T ss_pred             CcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhC
Confidence            89999998887652          1346787777777665432222111111100   000000000123667777  44


Q ss_pred             -CCccEEEEeecCCCccccCC--C-Cc---cc-cCCCcEEEEeccCc-CCC--C--cccccc--ccEEEeCCCccccC--
Q 043610          207 -PDAKYLHICANETIHGVEFK--E-YP---SA-KNSTGILVADMSSN-FCS--K--PVDVTR--FGVIYAGAQKNVGP--  269 (430)
Q Consensus       207 -~~~~lv~i~~~~t~tG~~~p--e-i~---~~-~~~g~~lvvD~a~s-~G~--~--~idl~~--~d~~~~s~~K~~gp--  269 (430)
                       +++++|++..+++++|++.|  + +.   ++ +++|+++++|++|+ +|.  .  ..+...  .|++++  .|+++.  
T Consensus       176 ~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~--sK~l~~g~  253 (400)
T PTZ00125        176 DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLL--GKALSGGL  253 (400)
T ss_pred             CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEE--cccccCCC
Confidence             67999999888999999997  2 44   43 58999999999975 552  1  122222  266654  499953  


Q ss_pred             CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          270 SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       270 ~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      ..+|++++++++++.+....           ....+ +.+...+.++.++|+.+.+ ++   +.++.+++.++++++|.+
T Consensus       254 ~~ig~v~~~~~~~~~~~~~~-----------~~~t~-~~~~~~~~aa~~~l~~i~~-~~---~~~~~~~~~~~l~~~l~~  317 (400)
T PTZ00125        254 YPISAVLANDDVMLVIKPGE-----------HGSTY-GGNPLACAVAVEALEVLKE-EK---LAENAQRLGEVFRDGLKE  317 (400)
T ss_pred             cCcEEEEEcHHHHhhccCCC-----------CCCCC-CcCHHHHHHHHHHHHHHHh-cC---HHHHHHHHHHHHHHHHHH
Confidence            35899999999887653211           01122 3355667777888888763 33   455666677777777765


Q ss_pred             cCCceecCCCCCCCccceEEEEcCC-CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEK-SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~-~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ..+......... ....++.+.++. ..... ++.+.|.++||.+.++.  .+.|||+++..++++|++++++.|+++++
T Consensus       318 l~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~~~~~i~~~l~~l~~~l~  394 (400)
T PTZ00125        318 LLKKSPWVKEIR-GKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPTH--DNIIRFAPPLVITKEQLDQALEIIKKVLK  394 (400)
T ss_pred             HHhcCCCeEEEe-cccEEEEEEEccCcchHHHHHHHHHHHCCeEEeecC--CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence            312111100001 122344555543 12233 68889989999987642  35799999888999999999999999876


Q ss_pred             hh
Q 043610          428 KH  429 (430)
Q Consensus       428 ~~  429 (430)
                      +.
T Consensus       395 ~~  396 (400)
T PTZ00125        395 SF  396 (400)
T ss_pred             HH
Confidence            53

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.79  E-value=5.4e-18  Score=170.69  Aligned_cols=275  Identities=14%  Similarity=0.055  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|++.  .++ + ++|+.++.+++. ++++||+|++....+.+.  .|...+++.| +++.++.   
T Consensus        54 p~~~~le~~lA~l~g~~~--~v~-~-~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~---  125 (390)
T PRK08064         54 PTREALEDIIAELEGGTK--GFA-F-ASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM---  125 (390)
T ss_pred             hhHHHHHHHHHHHhCCCC--eEE-E-CCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC---
Confidence            345688999999999873  444 3 678889988775 778999999877655432  2334556678 6666643   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~  264 (430)
                            .|+++++  +++++++|++++++|+||.+.|  +|.++ +++|+++++|++++.+..  ++++ ..|+++.|+|
T Consensus       126 ------~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~~~-g~Divv~S~t  198 (390)
T PRK08064        126 ------TNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPLDL-GADVVLHSAT  198 (390)
T ss_pred             ------CCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCchhh-CCcEEEeecc
Confidence                  2456665  7889999999999999999999  78886 788999999999876643  4433 2489999999


Q ss_pred             ccc-cCCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          265 KNV-GPSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       265 K~~-gp~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      ||+ |+.|  .|+++++ +++++.+++...   .         +....+....+.   +++-+   .-+..+.++..+.+
T Consensus       199 K~~~G~~~~laG~~v~~~~~~~~~l~~~~~---~---------~g~~~~~~~a~l---~~~gl---~tl~~R~~~~~~~a  260 (390)
T PRK08064        199 KFLAGHSDVLAGLAVVKDEELAQKLYFLQN---S---------FGAVLGVQDCWL---VLRGL---KTLHVRLEHSSETA  260 (390)
T ss_pred             eeccCCccceeEEEEeCCHHHHHHHHHHHH---h---------cCCCCCHHHHHH---HHccc---CcHHHHHHHHHHHH
Confidence            999 5877  4878876 466655432110   0         001122222221   22211   12456667777777


Q ss_pred             HHHHHHHHccCCce-e-cCC---CC--------CCCccceEEEEcCCCchhHHHHHHHHHcCCe---ecCC---------
Q 043610          341 ELLYNVIDGSNGFY-K-CPV---EK--------SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMV---QLKG---------  395 (430)
Q Consensus       341 ~~l~~~l~~~~G~~-~-~~~---~~--------~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~---~~~g---------  395 (430)
                      ..+.+.|++...+. + ++.   .+        .....++++|.+.+  .+ ++.+.+...++.   ...|         
T Consensus       261 ~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--~~-~~~~f~~~l~l~~~~~s~G~~~sl~~~~  337 (390)
T PRK08064        261 NKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--EE-AVRQFVSHVKLPVFAVSLGAVESILSYP  337 (390)
T ss_pred             HHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--HH-HHHHHHHhCCcceEcccCCCCcceeECC
Confidence            77888887643221 1 110   00        01123588999863  22 333344444542   1111         


Q ss_pred             ----CC------------CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          396 ----HR------------SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       396 ----~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                          |.            ..+.||+|++.+++++.|+.|..+|+++
T Consensus       338 ~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~  383 (390)
T PRK08064        338 AKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV  383 (390)
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence                10            1356999999999999999999999875

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.78  E-value=1.6e-17  Score=167.75  Aligned_cols=274  Identities=14%  Similarity=0.093  Sum_probs=170.1

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +.+|+.+....+.++.+.+.+...     ..+   +..+.+..   ...+++++.+++++|++.  .+ ++ ++|+.++.
T Consensus        30 ~pi~~~~~~~~~~~~~~~~~~~~~-----~~~---~~y~r~~~---p~~~~Le~~lA~l~G~~~--~~-~~-~sG~~Ai~   94 (398)
T PRK07504         30 EALFLTQGFVYDTAEAAEARFKGE-----DPG---FIYSRYSN---PTVDMFEKRMCALEGAED--AR-AT-ASGMAAVT   94 (398)
T ss_pred             CCeECCCCccCCCHHHHHHHhccC-----cCC---ceeecCCC---chHHHHHHHHHHHhCCCe--ee-Ee-cCHHHHHH
Confidence            447887777666666655432111     111   11111111   224588899999999975  23 34 57899998


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHH--HHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKA--FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~--~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      .++.+++++||+|++....+.+..+  ...+++.| +++.+.         ..|+++++  ++++||+|++++++|++|.
T Consensus        95 ~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd---------~~d~e~l~~ai~~~tklV~lesp~NptG~  165 (398)
T PRK07504         95 AAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD---------GLDLDNWEKAVRPNTKVFFLESPTNPTLE  165 (398)
T ss_pred             HHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC---------CCCHHHHHHhcCcCceEEEEECCCCCCcE
Confidence            8888888999999987765554432  22344567 555442         24667776  7899999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCc--cccccccEEEeCCCccccCCc--c-EEEEEcHHHHhc-cCCCCCcccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKP--VDVTRFGVIYAGAQKNVGPSG--V-TIVIVRKDLLGN-AQDKTPLMLD  294 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~~d~~~~s~~K~~gp~G--~-g~l~v~~~~~~~-~~~~~p~~~~  294 (430)
                      +.|  +|.++ +++|+++++|++++.+...  +++ ..|+++.|++||+|.+|  + |+++.+++.++. +.       +
T Consensus       166 v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~-gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~-------~  237 (398)
T PRK07504        166 VIDIAAVAKIANQAGAKLVVDNVFATPLFQKPLEL-GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ-------D  237 (398)
T ss_pred             ecCHHHHHHHHHHcCCEEEEECCccccccCCchhh-CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH-------H
Confidence            999  78886 6889999999999866543  322 24899999999996445  5 456666665543 11       0


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCcee--cCC---CCCC-------
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYK--CPV---EKSV-------  362 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~--~~~---~~~~-------  362 (430)
                      +..  .   ...+++....+.+...|+      -+..+.++..+.+..+.++|++.+++.-  +|.   .+.+       
T Consensus       238 ~~~--~---~g~~~s~~~A~~~l~~L~------tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~  306 (398)
T PRK07504        238 YFR--H---TGPSLSPFNAWTLLKGLE------TLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQM  306 (398)
T ss_pred             HHH--H---hCCCCCHHHHHHHHhccc------hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhC
Confidence            000  0   112344444343334443      2456677777888889999987555431  121   1110       


Q ss_pred             -CccceEEEEcCCCchhH--HHHHHHH
Q 043610          363 -RSFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       363 -rs~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                       ...++++|.+.+ +.+.  +|++.|+
T Consensus       307 ~g~g~~~s~~~~~-~~~~~~~~~~~l~  332 (398)
T PRK07504        307 TGGSTLVAFELKG-GKEAAFRFLNALK  332 (398)
T ss_pred             CCCccEEEEEeCC-CHHHHHHHHHhCC
Confidence             124578999964 2222  4565553

>PRK05968 hypothetical protein; Provisional

Probab=99.78  E-value=1.5e-17  Score=167.34  Aligned_cols=276  Identities=12%  Similarity=0.022  Sum_probs=178.3

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.+++++|.+.  .+ ++ +||+.|+..++.++++|||+|++....+.+..  +...++..| +++.++.     
T Consensus        65 ~~~le~~lA~l~g~~~--av-~~-~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~-----  135 (389)
T PRK05968         65 VRAFEEMLAKLEGAED--AR-GF-ASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG-----  135 (389)
T ss_pred             HHHHHHHHHHHhCCCc--EE-EE-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC-----
Confidence            6688999999999974  44 44 56789999988888899999998776554422  333455567 6655532     


Q ss_pred             CCCCCCccccc-cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCccc
Q 043610          194 YTKIPNFDALE-QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKNV  267 (430)
Q Consensus       194 ~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~~  267 (430)
                          .|+++++ .-+++++|++.++.++++.+.|  +|.++ +++|+++++|++++.+..  ++++ ..|+++.|++|++
T Consensus       136 ----~d~~~l~~~i~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~~~-g~Divv~S~tK~l  210 (389)
T PRK05968        136 ----RDEEAVAKALPGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPITL-GVDLVIHSASKYL  210 (389)
T ss_pred             ----CCHHHHHHhcccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCchhc-CCcEEEeeccccc
Confidence                2556666 2267999999877777776666  67776 689999999999877643  4433 3489999999999


Q ss_pred             c-CCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          268 G-PSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       268 g-p~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      + |.+  .|+++.++++++++......+           ..+..+....+.+..+|+      .+..+.++..+.+.++.
T Consensus       211 ~g~~~~~gG~i~~~~~~~~~l~~~~~~~-----------~g~~~~~~~A~~~l~~L~------tl~~r~~~~~~~a~~la  273 (389)
T PRK05968        211 GGHSDTVAGVVAGSKEHIARINAEAYPY-----------LGAKLSPFEAWLLLRGLR------TLPLRMKAHEASALEIA  273 (389)
T ss_pred             cCCCCeEEEEEEECHHHHHHHHHHHHHh-----------CCCCCChHHHHHHHcccC------cHHHHHHHHHHHHHHHH
Confidence            5 644  588888888877643211001           112333333333333332      45677777778889999


Q ss_pred             HHHHccCCceec--CCCCC--C----CccceEEEEcCCCchhH-HHHHHHHHcCCeec---------CCC----------
Q 043610          345 NVIDGSNGFYKC--PVEKS--V----RSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL---------KGH----------  396 (430)
Q Consensus       345 ~~l~~~~G~~~~--~~~~~--~----rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~---------~g~----------  396 (430)
                      ++|++.+++..+  +.-++  .    ...++++|.+++ +.+. +|+++|+..++...         +..          
T Consensus       274 ~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~  352 (389)
T PRK05968        274 RRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPN  352 (389)
T ss_pred             HHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHH
Confidence            999876665433  21011  0    112478899874 3333 68888876553321         110          


Q ss_pred             ------CCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          397 ------RSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       397 ------~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                            ...+.||+|++..++++=++.+..+|+.
T Consensus       353 ~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~  386 (389)
T PRK05968        353 SAARFGVSPRSVRLHVGLEGTEALWADLEQALAA  386 (389)
T ss_pred             HHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence                  0135699999986665556666666654

>PRK07505 hypothetical protein; Provisional

Probab=99.78  E-value=2.2e-16  Score=160.00  Aligned_cols=310  Identities=13%  Similarity=0.079  Sum_probs=187.4

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc----C
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL----C  155 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl----~  155 (430)
                      --+|+|++++.+++.++...+.+    +.+.....+..+++++.|+++++. .  . ++++ ++++|+..++..+    .
T Consensus        60 ~~~p~v~~A~~~~l~~~g~~~~~----~~~~~~~~~~~~~l~~~la~~~~~-~--~-~~~~-sG~~a~~~ai~~~~~~~~  130 (402)
T PRK07505         60 DTHPAIIEGAVDALKRTGSLHLS----SSRTRVRSQILKDLEEALSELFGA-S--V-LTFT-SCSAAHLGILPLLASGHL  130 (402)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCC----ccchhhhhHHHHHHHHHHHHHhCC-C--E-EEEC-ChHHHHHHHHHHHHhccc
Confidence            34889999999998764211111    111112346778999999999987 2  4 4443 5678888665332    2


Q ss_pred             CCCCc-EEEEeCChhHHHH-HHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CC
Q 043610          156 TPNDP-VDYIVTGSWGDKA-FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EY  228 (430)
Q Consensus       156 ~~gd~-vl~~~~g~~~~~~-~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei  228 (430)
                      .+|+. +++.+..+.+.-. .....+.+ +++.++         ..|+++++  +.+++++++++++.+++|.+.|  +|
T Consensus       131 ~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~---------~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i  201 (402)
T PRK07505        131 TGGVPPHMVFDKNAHASLNILKGICADETEVETID---------HNDLDALEDICKTNKTVAYVADGVYSMGGIAPVKEL  201 (402)
T ss_pred             CCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeC---------CCCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHH
Confidence            33433 4444433333211 11111123 333332         14666776  5677899999999999999999  78


Q ss_pred             ccc-cCCCcEEEEeccCcCCCC-----c-----ccc--ccccEEEeCCCccccCCccEEEEE-cHHHHhccCCCCCcccc
Q 043610          229 PSA-KNSTGILVADMSSNFCSK-----P-----VDV--TRFGVIYAGAQKNVGPSGVTIVIV-RKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       229 ~~~-~~~g~~lvvD~a~s~G~~-----~-----idl--~~~d~~~~s~~K~~gp~G~g~l~v-~~~~~~~~~~~~p~~~~  294 (430)
                      .++ +++|+++++|++|+++..     .     ++.  .+..+++.|+.|.+|..| |++.+ ++++++.+......+  
T Consensus       202 ~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~~~~~~~~~--  278 (402)
T PRK07505        202 LRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG-GVIMLGDAEQIELILRYAGPL--  278 (402)
T ss_pred             HHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC-eEEEeCCHHHHHHHHHhCCCc--
Confidence            886 688999999999865311     1     121  122367789999998767 77765 667766543211100  


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                              ...++++...+.++.++++.+.+ ..+.+..++.++..+.+.+.+.. .      . ..... .+..+.+++
T Consensus       279 --------t~~~~~~~~a~aa~~a~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~-~------~-~g~~~-~i~~~~~~~  340 (402)
T PRK07505        279 --------AFSQSLNVAALGAILASAEIHLS-EELDQLQQKLQNNIALFDSLIPT-E------Q-SGSFL-PIRLIYIGD  340 (402)
T ss_pred             --------eeCCCCCHHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHHHHh-c------C-CCCCC-CEEEEEeCC
Confidence                    11245677788888888885543 35555555555554444333221 1      0 01112 222333332


Q ss_pred             CchhHHHHHHHHHcCCeecCCCC---C--CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          375 SDLEAEFVKEAAKEKMVQLKGHR---S--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       375 ~~~~~~~~~~L~~~Gi~~~~g~~---~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .....++.++|.++||.+.+...   .  ..+|||++...++++|++++++.|++++++
T Consensus       341 ~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~  399 (402)
T PRK07505        341 EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE  399 (402)
T ss_pred             HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence            11223688999999999765311   1  147999999999999999999999998865

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.78  E-value=3e-17  Score=169.28  Aligned_cols=335  Identities=13%  Similarity=0.118  Sum_probs=192.9

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHH-HHHHHh-CC--CC-CcEEEEEeCc
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAES-DLRALL-NI--PQ-EYSVLFLQGG  142 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~-~la~l~-g~--~~-~~~vv~~~~g  142 (430)
                      ++++++.|.  .+.|+.|.+ +.+.+..   ..   |....+.+++   .+++.+ .+++.. +.  ++ +.+|++ +.|
T Consensus       101 ~~i~l~~g~p~~~~~~~v~e-~~~~~~~---~~---Y~~~~g~~~l---reaia~~~~~~~~~~~~~~~~~~~I~v-T~G  169 (527)
T PRK09275        101 DAVSYVRDQLGFDADEFVYE-LVDGIIG---DN---YPVPDRMLKH---TEKIVKDYLRQEMCGGRPPKGEFDLFA-VEG  169 (527)
T ss_pred             HHHhhcCCCCCCCCCHHHHH-HHHHHhc---CC---CCCCCCCHHH---HHHHHHHHHHhhccCCCCCCCcCeEEE-eCC
Confidence            356666665  355667777 4454421   11   2222233333   334433 223322 21  22 226666 588


Q ss_pred             HHHHHHHHHhh-----cCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEec--CCCCcCCCCCCccccc--cCCCccEE
Q 043610          143 ATTQFAAVPLN-----LCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS--GKAEKYTKIPNFDALE--QNPDAKYL  212 (430)
Q Consensus       143 aT~a~~~~~~s-----l~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~--~~~~~~g~~~d~~~l~--i~~~~~lv  212 (430)
                      +++|+..++.+     ++.|||+|++..+.+..+.  ..++..| .++.++.  .++..|  .+|.++++  +++++|+|
T Consensus       170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~--~~~~l~g~~~~~v~v~~~~~~~f--~~d~~~l~~~~~~~tkai  245 (527)
T PRK09275        170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYL--EIPELPRYDLEVVHINADEENEW--QYPDSELEKLRDPSIKAL  245 (527)
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHH--HHHHHcCCCeEEEEeecCcccCC--CCCHHHHHhhcCCCCCEE
Confidence            99999988876     6799999998887766543  2333333 4444443  322223  57778887  68899999


Q ss_pred             EEeecCCCccccCC--C---Cccc-c--CCCcEEEEeccCcC-CCCcccc-ccc---cEEEeCCCccccCCc--cEEEEE
Q 043610          213 HICANETIHGVEFK--E---YPSA-K--NSTGILVADMSSNF-CSKPVDV-TRF---GVIYAGAQKNVGPSG--VTIVIV  277 (430)
Q Consensus       213 ~i~~~~t~tG~~~p--e---i~~~-~--~~g~~lvvD~a~s~-G~~~idl-~~~---d~~~~s~~K~~gp~G--~g~l~v  277 (430)
                      ++++++||||.+++  +   |.++ +  +++++++.|+++.- ......+ +.+   -+++.|++|.+|++|  +|+++.
T Consensus       246 ~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~  325 (527)
T PRK09275        246 FLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIAL  325 (527)
T ss_pred             EEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhc
Confidence            99999999999999  3   4443 2  46999999998752 2111111 112   278899999999999  899999


Q ss_pred             cHH-----HHhccC--------C------CCCccccccc-------hhhcCCCCCCccHHHHHHHH-----HHHHHHHHh
Q 043610          278 RKD-----LLGNAQ--------D------KTPLMLDYKI-------HDENNSLYNTPPCYCIYMCG-----LVFEYLLEL  326 (430)
Q Consensus       278 ~~~-----~~~~~~--------~------~~p~~~~~~~-------~~~~~~~~~T~~~~~~~a~~-----~al~~l~~~  326 (430)
                      +++     +++.+.        .      ..|.-+.+-+       ....... ..++.+.++++.     ++|+.-  +
T Consensus       326 ~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t-~~~s~p~Q~a~al~~~~all~~~--~  402 (527)
T PRK09275        326 HEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHT-AGLSTPQQVQMALFSLFALLDEE--D  402 (527)
T ss_pred             CchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHhCc--h
Confidence            876     443321        0      0010000000       0001111 344555555422     223321  1


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC----------------chhHHHHHHHH-HcC
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS----------------DLEAEFVKEAA-KEK  389 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~----------------~~~~~~~~~L~-~~G  389 (430)
                      ..++++.+.++++++.+++.|.    +.+. ..++ .+..-+.+.++..                ..+.+|+.+|. ++|
T Consensus       403 ~~~~~~~~~~~~Rr~~l~~~Lg----~~~~-~~~p-~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~g  476 (527)
T PRK09275        403 AYKKAMKDIIRRRYKALYEGLG----LPEP-EDPN-NAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETG  476 (527)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC----CCCc-CCCC-CeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCC
Confidence            2356778888888888888773    2221 1111 1212222333210                01236888775 569


Q ss_pred             CeecCCCCC---CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          390 MVQLKGHRS---VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       390 i~~~~g~~~---~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      |++.+|...   .+++|||+.+ .+++++.+..+.|++++.++
T Consensus       477 V~v~PG~~Fg~~~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y  518 (527)
T PRK09275        477 VVLLPGGGFGGPEWSVRVSLAN-LNEEDYAKIGKAIRKLLDEY  518 (527)
T ss_pred             EEEeCchhhCCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHH
Confidence            999987542   4579999973 46788888888888877653

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.78  E-value=1.3e-18  Score=168.93  Aligned_cols=217  Identities=14%  Similarity=0.107  Sum_probs=155.7

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..++++++.+++++|++.   ++++++|+|+++.+++.++++|||+|++..+.+.+..  ......| ++++++...+.+
T Consensus        59 g~i~~~~~~~A~~~ga~~---~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~--~~~~~~g~~~~~v~~~~~~~  133 (294)
T cd00615          59 GPIKEAQELAARAFGAKH---TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVI--NGLVLSGAVPVYLKPERNPY  133 (294)
T ss_pred             hHHHHHHHHHHHHhCCCC---EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHH--HHHHHCCCEEEEecCccCcc
Confidence            567899999999999863   4555688999999999999999999998888776642  2334457 777776543212


Q ss_pred             CC--CCCCccccc--c--CCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcC-----CCCcccccc--cc
Q 043610          194 YT--KIPNFDALE--Q--NPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNF-----CSKPVDVTR--FG  257 (430)
Q Consensus       194 ~g--~~~d~~~l~--i--~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~-----G~~~idl~~--~d  257 (430)
                      ++  ..+|+++++  +  .+++++|+++++ |++|.+.|  +|.++ +++|+++++|++|+.     +..+.+..+  .|
T Consensus       134 ~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~d  212 (294)
T cd00615         134 YGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGAD  212 (294)
T ss_pred             cCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCc
Confidence            21  246788887  4  367999999976 78999999  78886 789999999999874     233444333  37


Q ss_pred             EEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043610          258 VIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN  336 (430)
Q Consensus       258 ~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~  336 (430)
                      +++.|+||++ |+++.|+++++.+..... .       +...... ...++|+...+.++..+++++.. .|. +..++.
T Consensus       213 iv~~S~hK~l~g~~~~~~l~~~~~~~~~~-~-------~~~~~~~-~~ttsps~~~~asl~~a~~~~~~-~g~-~~~~~~  281 (294)
T cd00615         213 IVVQSTHKTLPALTQGSMIHVKGDLVNPD-R-------VNEALNL-HQSTSPSYLILASLDVARAMMAL-EGK-ELVEEL  281 (294)
T ss_pred             EEEEchhcccchHhHHHHHHhCCCcCCHH-H-------HHHHHHH-HCCCCcHHHHHHHHHHHHHHHHH-HhH-HHHHHH
Confidence            9999999999 477778887765532110 0       0000011 12368899999999999998764 354 467778


Q ss_pred             HHHHHHHHHHHH
Q 043610          337 RKKAELLYNVID  348 (430)
Q Consensus       337 ~~l~~~l~~~l~  348 (430)
                      .++.+.++++|.
T Consensus       282 ~~~~~~~r~~l~  293 (294)
T cd00615         282 IELALYARQEIN  293 (294)
T ss_pred             HHHHHHHHHHHh
Confidence            888888988875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.78  E-value=5e-17  Score=165.00  Aligned_cols=329  Identities=13%  Similarity=0.078  Sum_probs=203.7

Q ss_pred             CCCCceeecCC-----CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAG-----PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~g-----p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+++..|     -+-.+|.|++++.+.+....     .+....   ...+...++++.|+++++.+.+ +++++ +
T Consensus        34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-----~~~~~~---~~~~~~~~l~~~l~~~~~~~~~-~v~~~-~  103 (413)
T cd00610          34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLT-----HFSLGF---FYNEPAVELAELLLALTPEGLD-KVFFV-N  103 (413)
T ss_pred             CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCc-----CccCcc---cCCHHHHHHHHHHHHhCCCCCC-EEEEc-C
Confidence            34456666654     23367899999999885311     110100   1134567889999999997554 77775 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCCCc--CCCCCCccccc
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKAEK--YTKIPNFDALE  204 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~~~--~g~~~d~~~l~  204 (430)
                      |+++|+..++..+  ..++++|++.+.++.+....... ..+             .+..++...+..  .....|+++++
T Consensus       104 sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~  182 (413)
T cd00610         104 SGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALS-LTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALE  182 (413)
T ss_pred             cHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHH-hcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHH
Confidence            8999999988876  35788999888776664221111 111             122232211000  00112556665


Q ss_pred             --cCC---CccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCc
Q 043610          205 --QNP---DAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQK  265 (430)
Q Consensus       205 --i~~---~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K  265 (430)
                        +.+   ++++|++..+++++|...+      +|.++ +++|+++++|++++ +|..  ....+.+    |++  +++|
T Consensus       183 ~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~--t~sK  260 (413)
T cd00610         183 EALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLGK  260 (413)
T ss_pred             HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeE--EEcc
Confidence              433   5778888888888899875      24443 58999999999986 3211  1111111    444  5569


Q ss_pred             cccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          266 NVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       266 ~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      ++|. ..+|+++.++++++.+. .....        ...+ .+.+...+.++.++|+.+.+    +.+.++..++.++++
T Consensus       261 ~l~~g~~~g~~~~~~~~~~~~~-~~~~~--------~~~t-~~~~~~~~~a~~a~l~~l~~----~~~~~~~~~~~~~l~  326 (413)
T cd00610         261 GLGGGLPLGAVLGREEIMDAFP-AGPGL--------HGGT-FGGNPLACAAALAVLEVLEE----EGLLENAAELGEYLR  326 (413)
T ss_pred             cccCccccEEEEEcHHHHHhhc-cCCCC--------CCCC-CCcCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHH
Confidence            9963 33899999998887641 01100        0011 24556677888888988763    356788888888888


Q ss_pred             HHHHccCC-ceecCCCCCCCccceEEEEcCCC--------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610          345 NVIDGSNG-FYKCPVEKSVRSFMNVPFTLEKS--------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       345 ~~l~~~~G-~~~~~~~~~~rs~~iv~f~~~~~--------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv  415 (430)
                      +.|++... .... ......+ .++.+.+++.        ....++.+.|.++||.+.++.  .+.+|++++.+++++|+
T Consensus       327 ~~l~~~~~~~~~~-~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~--~~~lR~~~~~~~t~~~i  402 (413)
T cd00610         327 ERLRELAEKHPLV-GDVRGRG-LMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG--GNVIRLLPPLIITEEEI  402 (413)
T ss_pred             HHHHHHHhhCCcE-EEeecCc-eEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC--CCEEEEECCCcCCHHHH
Confidence            88876321 1111 1111123 4566666542        112368888999999988753  35799999999999999


Q ss_pred             HHHHHHHHHHH
Q 043610          416 EKLVAFMKDFQ  426 (430)
Q Consensus       416 ~~ll~~L~~~~  426 (430)
                      +++++.|++++
T Consensus       403 ~~~~~~l~~~l  413 (413)
T cd00610         403 DEGLDALDEAL  413 (413)
T ss_pred             HHHHHHHHHhC
Confidence            99999998753

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.77  E-value=5.2e-17  Score=163.12  Aligned_cols=237  Identities=13%  Similarity=0.084  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-H-HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-K-AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~-~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+++.|.+   +++++ +|+++++..++.++++|||+|++..+.+.+. . +...++..+ ++..+.      
T Consensus        54 ~~~L~~~lA~l~g~~---~~i~~-~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd------  123 (386)
T PRK08045         54 RDVVQRALAELEGGA---GAVLT-NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD------  123 (386)
T ss_pred             HHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC------
Confidence            447889999999964   46664 7899999999999999999999877666542 2 222233334 333321      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                         ..|+++++  +++++++|++++++||||.++|  +|.++ +++|+++++|+++..+..  |+++ ..|+++.|++||
T Consensus       124 ---~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl~~-gaDivv~S~tK~  199 (386)
T PRK08045        124 ---QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPLAL-GADLVLHSCTKY  199 (386)
T ss_pred             ---CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCchhh-CCCEEEeeccee
Confidence               24566676  6789999999999999999999  78886 678999999999876654  3333 238999999999


Q ss_pred             c-cCCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 V-GPSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~-gp~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      + |+.+  .|+++++ +++++.+..    +.      .  ....+.+....+.+..+|+      -++.+.+++.+.+..
T Consensus       200 l~G~~d~~~G~vi~~~~~~~~~l~~----~~------~--~~g~~~~p~~~~l~~rgl~------tl~~R~~~~~~na~~  261 (386)
T PRK08045        200 LNGHSDVVAGVVIAKDPDVVTELAW----WA------N--NIGVTGGAFDSYLLLRGLR------TLVPRMELAQRNAQA  261 (386)
T ss_pred             ccCCCCceeEEEEeCcHHHHHHHHH----HH------H--hcCCCCCHHHHHHHHhhhc------cHHHHHHHHHHHHHH
Confidence            9 5776  5767664 555554311    00      0  1123455555555555554      256677888888888


Q ss_pred             HHHHHHccCCcee--cCC---CCCC--------CccceEEEEcCCCchhH--HHHHHHH
Q 043610          343 LYNVIDGSNGFYK--CPV---EKSV--------RSFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       343 l~~~l~~~~G~~~--~~~---~~~~--------rs~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                      +.++|++.+.+.-  +|.   .+.+        ...++++|.+++ +.+.  +|+..|+
T Consensus       262 la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~  319 (386)
T PRK08045        262 IVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-DEQTLRRFLGGLS  319 (386)
T ss_pred             HHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhcc
Confidence            9999987554432  121   1110        124678899974 2222  4666654

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.77  E-value=9.6e-17  Score=161.12  Aligned_cols=315  Identities=11%  Similarity=0.069  Sum_probs=198.8

Q ss_pred             CCceeecCC----C-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           69 DRVFNFAAG----P-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        69 ~~~~l~~~g----p-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      ...++|..|    + +..++.|.+++.+.+.+....       ..+..  .....++++.+++++|.+   +++++ .|+
T Consensus        27 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-------~~~~~--~~~~~~l~~~la~~~g~~---~~~~~-~sg   93 (379)
T TIGR00707        27 KEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHV-------SNLYY--TEPQEELAEKLVEHSGAD---RVFFC-NSG   93 (379)
T ss_pred             CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccc-------ccccC--CHHHHHHHHHHHhhCCCC---EEEEe-CCc
Confidence            344555553    2 234589999999888653211       01111  244668889999999875   67775 688


Q ss_pred             HHHHHHHHhhc---CC----CCCcEEEEeCChhHHHHHHHHHHhC-CceE----EecCCCCcCCCC--CCccccc--cCC
Q 043610          144 TTQFAAVPLNL---CT----PNDPVDYIVTGSWGDKAFKEAQKFC-NPQV----IWSGKAEKYTKI--PNFDALE--QNP  207 (430)
Q Consensus       144 T~a~~~~~~sl---~~----~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~----v~~~~~~~~g~~--~d~~~l~--i~~  207 (430)
                      ++++..++..+   ..    +||+|++..+.+.++..  .+...+ ....    .+...  ++...  .|+++++  +++
T Consensus        94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~~~~  169 (379)
T TIGR00707        94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTM--GALSATGQPKYQKGFEPLVP--GFSYAPYNDIESLKKAIDD  169 (379)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccH--HHHHhcCChhhhccCCCCCC--CceeeCCCCHHHHHHHhhh
Confidence            99999877644   12    37899887766544321  121222 2111    11111  11111  1566676  677


Q ss_pred             CccEEEEeecCCCcccc-CC-----CCccc-cCCCcEEEEeccCc-CCCC----ccccccc--cEEEeCCCccccCCc--
Q 043610          208 DAKYLHICANETIHGVE-FK-----EYPSA-KNSTGILVADMSSN-FCSK----PVDVTRF--GVIYAGAQKNVGPSG--  271 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~~-~p-----ei~~~-~~~g~~lvvD~a~s-~G~~----~idl~~~--d~~~~s~~K~~gp~G--  271 (430)
                      ++++|++.++++++|.. .+     +|.++ +++|+++++|++++ +|..    +++....  |++  +++|.++ +|  
T Consensus       170 ~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~r  246 (379)
T TIGR00707       170 ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII--TLAKGLG-GGVP  246 (379)
T ss_pred             CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE--EEccccc-CCcc
Confidence            89999998888888875 33     34554 58999999999986 5432    1111112  444  4689998 45  


Q ss_pred             cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      +|+++.++++++.+.+...            ....+.+...+.++.++|+.+..    .+..++.++++++++++|.+. 
T Consensus       247 iG~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~aa~aaL~~~~~----~~~~~~~~~~~~~~~~~l~~~-  309 (379)
T TIGR00707       247 IGATLAKEEVAEAFTPGDH------------GSTFGGNPLACAAALAVLEVIEK----ERLLENVKEKGDYFKERLEEL-  309 (379)
T ss_pred             cEEEEEcHHHHhhhcCCCC------------CCCCCCCHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHHHH-
Confidence            8999999988776532110            01124577888889999987652    346778888888888888753 


Q ss_pred             CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +.... ..........+.+.+++ . ..++.+.|.++||.+.++.  .+++||+++..+++++++++++.|+++
T Consensus       310 ~~~~~-~~~~~~~g~~~~~~~~~-~-~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~  378 (379)
T TIGR00707       310 GKNYP-NKEVRGKGLMLGIELEA-P-CKDIVKKALEKGLLVNCAG--PKVLRFLPPLIITKEEIDEAVSALEEA  378 (379)
T ss_pred             HhhCC-CCccccCceEEEEEecC-c-HHHHHHHHHHCCcEEeeCC--CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence            33221 11111112345566653 2 3478889999999987642  357999998888999999999999875

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.77  E-value=2.8e-17  Score=164.73  Aligned_cols=238  Identities=11%  Similarity=0.050  Sum_probs=157.0

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH-H-HHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA-F-KEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~-~-~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.++++.+..   +++++ +|+++|+..++.+++++||+|++.++.|.+... . ...++.| ++..+..     
T Consensus        63 ~~~Le~~iA~le~~~---~~~~~-~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~-----  133 (394)
T PRK09028         63 HFAFQAAIVELEGGA---GTALY-PSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDP-----  133 (394)
T ss_pred             HHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECC-----
Confidence            347788999998764   46665 789999999999999999999988777645421 1 1234566 5544432     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~K~  266 (430)
                          .+.++++  ++++||+|++.+++|++|.+.|  +|+++ +++|+++++|++++.+.  .|+++ ..|+++.|++||
T Consensus       134 ----~~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~-GaDivv~S~tK~  208 (394)
T PRK09028        134 ----MIGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPFEM-GVDISIQAATKY  208 (394)
T ss_pred             ----CCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCcccc-CceEEEEeCCeE
Confidence                1224465  6889999999999999999999  78886 78999999999998773  45543 248999999999


Q ss_pred             c-cCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610          267 V-GPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       267 ~-gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l  343 (430)
                      + |+..  .|+++.+++..+.+..       +.   .  ....+++....+.+...|+      -+.-+.+++.+.+..+
T Consensus       209 l~Gh~d~~~G~~~~~~~~~~~l~~-------~~---~--~~G~~~~p~~a~l~~rgl~------TL~lR~~~~~~na~~l  270 (394)
T PRK09028        209 IVGHSDVMLGTATANEKHWDQLRE-------HS---Y--LMGQCTSPDDVYLAMRGLR------TLGVRLAQHEKNALKV  270 (394)
T ss_pred             ecCCCCEEEEEEECCHHHHHHHHH-------HH---H--hcCCCCCHHHHHHHHcccC------cHHHHHHHHHHHHHHH
Confidence            9 5744  4555556666544321       00   0  1123555555554444443      3567778888888899


Q ss_pred             HHHHHccCCceec--CC---CCC--------CCccceEEEEcCCCchhH--HHHHHHH
Q 043610          344 YNVIDGSNGFYKC--PV---EKS--------VRSFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       344 ~~~l~~~~G~~~~--~~---~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                      .++|++.+.+.-+  |-   .+.        ....++++|.+++.+.+.  +|++.|+
T Consensus       271 a~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~  328 (394)
T PRK09028        271 ANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQ  328 (394)
T ss_pred             HHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCC
Confidence            9999875443211  20   111        012468999997322222  4555553

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.77  E-value=4.5e-17  Score=164.05  Aligned_cols=276  Identities=16%  Similarity=0.108  Sum_probs=175.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   .++++ +|+++|+..++.+++++||+|++....+.+..  +...++..| +++.++.   
T Consensus        61 p~~~~le~~la~l~g~~---~~v~~-ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~---  133 (390)
T PRK08133         61 PTVTMFQERLAALEGAE---ACVAT-ASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL---  133 (390)
T ss_pred             hHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC---
Confidence            34668999999999986   35554 78999999999999999999987655443322  223445667 6665543   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~  264 (430)
                            .|.++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+.  .|+++ ..|+++.|++
T Consensus       134 ------~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl~~-g~Divv~S~s  206 (390)
T PRK08133        134 ------TDLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPLKL-GADVVIHSAT  206 (390)
T ss_pred             ------CCHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCchhh-CCcEEEeecc
Confidence                  2455665  6889999999999999999999  78886 78999999999986554  34333 2389999999


Q ss_pred             ccccCCc--c-EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          265 KNVGPSG--V-TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       265 K~~gp~G--~-g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      |++++.|  + |+++.+++.++.+..    +..     .   ...+++....+.+...++      .+..+.++..+.+.
T Consensus       207 K~~~g~g~~~GG~vv~~~~~~~~~~~----~~~-----~---~g~~~~~~~a~~~l~gl~------tl~~R~~~~~~~a~  268 (390)
T PRK08133        207 KYLDGQGRVLGGAVVGSKELMEEVFG----FLR-----T---AGPTLSPFNAWVFLKGLE------TLSLRMEAHSANAL  268 (390)
T ss_pred             eeecCCcceEeEEEEcCHHHHHHHHH----HHH-----H---hCCCCCHHHHHHHHcccc------hHHHHHHHHHHHHH
Confidence            9998767  4 666667776654321    000     0   111333333222222222      35566667777888


Q ss_pred             HHHHHHHccCCceec--CC--C-CC--------CCccceEEEEcCCCchhH--HHHHHHHHcCCe----------ecC--
Q 043610          342 LLYNVIDGSNGFYKC--PV--E-KS--------VRSFMNVPFTLEKSDLEA--EFVKEAAKEKMV----------QLK--  394 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~--~~--~-~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~~~Gi~----------~~~--  394 (430)
                      .+.++|.+.+++..+  |.  . +.        ....++++|.+.+ +.+.  +|++.|+--.+.          ..+  
T Consensus       269 ~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~-~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~  347 (390)
T PRK08133        269 ALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG-GREAAWRVIDATRLISITANLGDTKTTITHPAT  347 (390)
T ss_pred             HHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC-CHHHHHHHHHhCCcceEeccCCCcceeeecCCC
Confidence            888899876554422  11  1 00        1124689999964 2222  455555321111          011  


Q ss_pred             -CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          395 -GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       395 -g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       .+.            ..+-||+|++.    ||++.|++-|+..++
T Consensus       348 ~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~  389 (390)
T PRK08133        348 TTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA  389 (390)
T ss_pred             CCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence             110            13469999996    677777777776553

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.77  E-value=3.9e-17  Score=164.65  Aligned_cols=240  Identities=12%  Similarity=0.067  Sum_probs=157.1

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   +.+++ +||++|+..++.+++++||+|++..+.+.+..  +...+++.| ++..++    
T Consensus        64 p~~~~le~~lA~l~g~~---~~i~~-ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd----  135 (398)
T PRK08249         64 PTVQAFEEKVRILEGAE---AATAF-STGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE----  135 (398)
T ss_pred             hHHHHHHHHHHHHhCCC---eEEEe-CChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC----
Confidence            34568899999999975   34554 67899999999999999999998776655432  222344566 543332    


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCc
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQK  265 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K  265 (430)
                           ..|+++++  +++++++|++++++|+||.+.|  +|.++ +++|+++++|++++.+.....+. ..|+++.|++|
T Consensus       136 -----~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK  210 (398)
T PRK08249        136 -----TGDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATK  210 (398)
T ss_pred             -----CCCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCce
Confidence                 24667776  7889999999999999999999  78886 78999999999988554321121 34799999999


Q ss_pred             cccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          266 NVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       266 ~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++|+.|   .|+++.++++++.+..       +.   .  ....+++....+.+...++.      ++...++..+.+..
T Consensus       211 ~l~g~~~~~gG~vv~~~~l~~~l~~-------~~---~--~~g~~~s~~~a~l~l~~l~t------L~~R~~~~~~na~~  272 (398)
T PRK08249        211 FLSGHADALGGVVCGSKELMEQVYH-------YR---E--INGATMDPMSAYLILRGMKT------LKLRVRQQQESAMA  272 (398)
T ss_pred             ecCCCCCceEEEEECCHHHHHHHHH-------HH---H--hcCCCCCHHHHHHHHhCcch------HHHHHHHHHHHHHH
Confidence            997544   3667777777665421       10   0  11134455444444444443      34566777788888


Q ss_pred             HHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCCchhH--HHHHHHH
Q 043610          343 LYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       343 l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                      +.++|++.+.+.-  +|.   .+.        ....++++|.+++ +.+.  +|++.|+
T Consensus       273 la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~-~~~~~~~f~~~l~  330 (398)
T PRK08249        273 LAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG-GMDTVKRLLPKLR  330 (398)
T ss_pred             HHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC-CHHHHHHHHHhCC
Confidence            8888887444331  121   111        0134688999874 2221  4555553

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.77  E-value=5.1e-17  Score=167.30  Aligned_cols=283  Identities=13%  Similarity=0.102  Sum_probs=169.3

Q ss_pred             EEEEEeCcHHHHHHHHHhh-----cCCCCCcEEEEeCChhHHHHHHHHHH--hC-CceEEecCCCCcCC---CCCCcccc
Q 043610          135 SVLFLQGGATTQFAAVPLN-----LCTPNDPVDYIVTGSWGDKAFKEAQK--FC-NPQVIWSGKAEKYT---KIPNFDAL  203 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~s-----l~~~gd~vl~~~~g~~~~~~~~~a~~--~g-~~~~v~~~~~~~~g---~~~d~~~l  203 (430)
                      +|++ +.|+++|+..++.+     ++.|||+|++..+.+..+.  ..++.  +| +++.++..+....|   ..+|.+++
T Consensus       157 ~V~i-t~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~--~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l  233 (521)
T TIGR03801       157 DLFA-VEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYL--EIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKEL  233 (521)
T ss_pred             eEEE-eCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHH--HHHHHhcCCcEEEEeecccccccccccCCCCHHHH
Confidence            5665 58999999998877     6789999998887766543  23333  35 55555553321211   34677788


Q ss_pred             c--cCCCccEEEEeecCCCccccCC--C---Cccc-cC--CCcEEEEeccCc-CCCCcccc-ccc-c--EEEeCCCcccc
Q 043610          204 E--QNPDAKYLHICANETIHGVEFK--E---YPSA-KN--STGILVADMSSN-FCSKPVDV-TRF-G--VIYAGAQKNVG  268 (430)
Q Consensus       204 ~--i~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~--~g~~lvvD~a~s-~G~~~idl-~~~-d--~~~~s~~K~~g  268 (430)
                      +  +++++|+|++++++||||.+++  +   |.++ ++  +++++|.|++++ +......+ +.+ +  +++.|++|.+|
T Consensus       234 ~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg  313 (521)
T TIGR03801       234 EKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFG  313 (521)
T ss_pred             HHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhcc
Confidence            7  5789999999999999999999  3   4443 34  489999999875 22111121 112 2  78899999999


Q ss_pred             CCc--cEEEEEcHH-----HHhc--------cCCC------CCccccc----cch---hhcCCCCCCccHHHHH--HHHH
Q 043610          269 PSG--VTIVIVRKD-----LLGN--------AQDK------TPLMLDY----KIH---DENNSLYNTPPCYCIY--MCGL  318 (430)
Q Consensus       269 p~G--~g~l~v~~~-----~~~~--------~~~~------~p~~~~~----~~~---~~~~~~~~T~~~~~~~--a~~~  318 (430)
                      .+|  +|+++.+++     +++.        +.+.      .|.-+.+    -..   .....+.| .+.+.+.  ++-.
T Consensus       314 ~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g-~s~p~Q~q~al~a  392 (521)
T TIGR03801       314 ATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAG-LSTPQQVQMALFS  392 (521)
T ss_pred             CchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCC-CCcHHHHHHHHHH
Confidence            989  999998765     3321        1110      0100000    000   01112222 2333333  3222


Q ss_pred             HHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc----------------hhHHH
Q 043610          319 VFEYLLE-LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD----------------LEAEF  381 (430)
Q Consensus       319 al~~l~~-~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~----------------~~~~~  381 (430)
                      ++..+.. ...++++.++++++++.+++.|    |+.+. ..++ .+..-+.+.++...                .+.+|
T Consensus       393 ~~all~~~~~y~~~~~~~~~~R~~~l~~~L----g~~~~-~~~~-~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~  466 (521)
T TIGR03801       393 LFALMDKENAYKAETKDICRRREKLLFRGL----GLPLQ-EDPN-DVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDV  466 (521)
T ss_pred             HHHHhccchhHHHHHHHHHHHHHHHHHHhc----CCCCc-CCCC-CeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHH
Confidence            2222211 1245677788888888888777    33321 1111 12222334444210                12268


Q ss_pred             HHHHH-HcCCeecCCCCC---CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          382 VKEAA-KEKMVQLKGHRS---VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       382 ~~~L~-~~Gi~~~~g~~~---~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+|. ++||++.+|...   .+++|||+.+ .+++++.+..+.|++++.+
T Consensus       467 ~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~-l~~~~~~~~~~rl~~~~~~  516 (521)
T TIGR03801       467 LFRLAEETGIVLLPGGGFGGPEWSVRVSLAN-LNEYDYAEIGRAIRKILDE  516 (521)
T ss_pred             HHHHHHhCCEEEeCchhcCCCCCeEEEEecC-CCHHHHHHHHHHHHHHHHH
Confidence            87775 569999987532   4579999964 4688899998988888764

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.77  E-value=3.5e-17  Score=164.19  Aligned_cols=273  Identities=11%  Similarity=0.042  Sum_probs=175.5

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.+++++|.+   .++++ ++++.++.+++. ++++||+|++....+.+..  |...+++.| +++.++.     
T Consensus        49 ~~~le~~la~l~g~~---~~l~~-~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----  118 (378)
T TIGR01329        49 RTALESLLAKLDKAD---RAFAF-SSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT-----  118 (378)
T ss_pred             HHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-----
Confidence            568899999999984   34555 567889988665 7799999998766554432  333455677 6655543     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                          .|+++++  +++++++|+++++.|++|.+.|  +|.++ +++|+++++|++++.+..  ++++ ..|++++|++||
T Consensus       119 ----~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l~~-g~Di~v~S~tK~  193 (378)
T TIGR01329       119 ----TDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPLEL-GADIVYHSATKF  193 (378)
T ss_pred             ----CCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhc-CCcEEEEeccee
Confidence                2556676  7889999999999999999999  78886 789999999999876654  3433 348999999999


Q ss_pred             c-cCCc--cEEEEEcHHH-HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 V-GPSG--VTIVIVRKDL-LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~-gp~G--~g~l~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      + |+.|  .|+++++++. .+++.+    +.      ..  ...+.+....+.+...+      .-+..+.++..+.+..
T Consensus       194 l~G~~~~~~G~v~~~~~~~~~~~~~----~~------~~--~G~~~~~~~a~l~~~~l------~tl~~R~e~~~~na~~  255 (378)
T TIGR01329       194 LAGHSDVMAGVLAVKGEEIAKKVYF----LQ------NS--TGSGLAPFDCWLLLRGI------KTLAIRIEKQQENARA  255 (378)
T ss_pred             ccCCccceeEEEEeCcHHHHHHHHH----HH------Hh--cCCcCCHHHHHHHHccC------CCHHHHHHHHHHHHHH
Confidence            9 5777  7889886544 344321    00      00  01122222222111122      1456677777777777


Q ss_pred             HHHHHHccCCce--ecCC--C-C--------CCCccceEEEEcCCCchh-H-HHHHHHHHcCCeecCC------------
Q 043610          343 LYNVIDGSNGFY--KCPV--E-K--------SVRSFMNVPFTLEKSDLE-A-EFVKEAAKEKMVQLKG------------  395 (430)
Q Consensus       343 l~~~l~~~~G~~--~~~~--~-~--------~~rs~~iv~f~~~~~~~~-~-~~~~~L~~~Gi~~~~g------------  395 (430)
                      +.++|++.+.+.  .++.  + +        ......+++|.+.  +.+ . +|+..|+..++....|            
T Consensus       256 la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~--~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~  333 (378)
T TIGR01329       256 IAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG--SVALSKRLVEATKLFSITVSFGSVNSLISMPCFM  333 (378)
T ss_pred             HHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC--CHHHHHHHHHhCcCcccccCCCCCCceeeCCCcc
Confidence            888887643321  1110  0 0        0112358999994  333 3 6888886555443221            


Q ss_pred             -CC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          396 -HR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       396 -~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       +.            ..+-||+|++.    ||++.|++-|+..+++
T Consensus       334 ~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~  375 (378)
T TIGR01329       334 SHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVT  375 (378)
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence             10            13469999996    6777777777776653

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.77  E-value=6e-17  Score=162.08  Aligned_cols=275  Identities=11%  Similarity=-0.005  Sum_probs=177.0

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHH-HHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFK-EAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~-~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+++.|.+   +++++ +|+++|+..++.+++++||+|++.+..+.+. .+.. ..++.| ++..+...    
T Consensus        52 ~~~lE~~lA~l~g~~---~~~~~-~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~----  123 (377)
T TIGR01324        52 HFALQDAMCELEGGA---GCYLY-PSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL----  123 (377)
T ss_pred             HHHHHHHHHHHhCCC---cEEEE-CcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC----
Confidence            347789999999975   46665 6899999999999999999999777665443 2222 234456 54433221    


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                           +.++++  +++++|+|++.+++|++|.+.|  +|+++ +++|+++++|++|+.|..  |+++ ..|+++.|++||
T Consensus       124 -----~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl~~-gaDivv~S~tK~  197 (377)
T TIGR01324       124 -----IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPLEH-GVDISIQAGTKY  197 (377)
T ss_pred             -----CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCcccc-CceEEEecCcee
Confidence                 114565  6889999999999999999999  78886 789999999999998876  4433 348999999999


Q ss_pred             cc-CCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610          267 VG-PSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       267 ~g-p~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l  343 (430)
                      +| +.+  .|+++.+++.++.+..   ...         ....+.+....+.+...++-      +..+.+++.+.+..+
T Consensus       198 l~G~~d~~gG~v~~~~~~~~~l~~---~~~---------~~G~~l~p~~a~~~~rgl~t------l~~R~~~~~~~a~~l  259 (377)
T TIGR01324       198 LVGHSDIMIGTVVANARTWDQLRE---HSY---------LMGQMVDADDAYTTLRGLRT------LGVRLKQHQESSLAI  259 (377)
T ss_pred             ccCCCCceEEEEEeCHHHHHHHHH---HHH---------HhCCCCCHHHHHHHHhhhhh------HHHHHHHHHHHHHHH
Confidence            95 654  5778888877665321   000         01123444444544445542      345566777777778


Q ss_pred             HHHHHccCCce-ec-CC---CCC--------CCccceEEEEcCCCchhH--HHHHHHHHcCCeecCC---------C---
Q 043610          344 YNVIDGSNGFY-KC-PV---EKS--------VRSFMNVPFTLEKSDLEA--EFVKEAAKEKMVQLKG---------H---  396 (430)
Q Consensus       344 ~~~l~~~~G~~-~~-~~---~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~~~Gi~~~~g---------~---  396 (430)
                      .+.|++.+.+. ++ |.   .+.        ....++++|.+++.+.+.  +|++.|+--++....|         +   
T Consensus       260 a~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~  339 (377)
T TIGR01324       260 AKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPEL  339 (377)
T ss_pred             HHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCC
Confidence            88887644332 11 10   110        123578999997422222  5777765433321111         0   


Q ss_pred             ---------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          397 ---------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       397 ---------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                               ...+-||+|++.    ||.+.+++-|+..++
T Consensus       340 ~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~  375 (377)
T TIGR01324       340 GHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFE  375 (377)
T ss_pred             CHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHh
Confidence                     012359999996    566666666666554

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.77  E-value=8e-17  Score=163.75  Aligned_cols=151  Identities=12%  Similarity=0.058  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHH-HHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAF-KEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~-~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.++++.|...   .+++ +|||+|+++++.+++++||+|++....+.+. .+. ..+++.| ++++++.   
T Consensus        64 p~~~~le~~lA~l~g~~~---av~~-sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~---  136 (433)
T PRK08134         64 PTVAVLEERVAALEGGVG---AIAT-ASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP---  136 (433)
T ss_pred             hHHHHHHHHHHHHhCCCc---EEEe-CCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC---
Confidence            346789999999999863   4554 7899999999998889999998876655443 221 2235567 6666653   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCc
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQK  265 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K  265 (430)
                            -|+++++  ++++|++|++.++.|++|.+.|  +|+++ +++|+++++|++|+.+....+++ ..|+++.|+||
T Consensus       137 ------~d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK  210 (433)
T PRK08134        137 ------GDIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATK  210 (433)
T ss_pred             ------CCHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEecccc
Confidence                  1556776  7899999999999999999999  78886 78999999999999887655552 24899999999


Q ss_pred             cccCCc--cEEEEEc
Q 043610          266 NVGPSG--VTIVIVR  278 (430)
Q Consensus       266 ~~gp~G--~g~l~v~  278 (430)
                      |+|+.|  +|.+++.
T Consensus       211 ~l~g~g~~~gG~v~~  225 (433)
T PRK08134        211 FLGGHGTAIGGVLVD  225 (433)
T ss_pred             ccCCCCCceEEEEEe
Confidence            998777  6666653

>PRK04311 selenocysteine synthase; Provisional

Probab=99.77  E-value=2.9e-16  Score=160.25  Aligned_cols=327  Identities=15%  Similarity=0.119  Sum_probs=195.6

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ....+|..+.|-+++++.+++++.+.+..+.+.... +..+.++    +.++.+++.+++++|++.   .+++ ++++.|
T Consensus        84 atg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~-l~~g~~g----~r~~~~e~~lA~l~Gae~---a~vv-~sgtaA  154 (464)
T PRK04311         84 ATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYD-LATGKRG----SRDRALAALLCALTGAED---ALVV-NNNAAA  154 (464)
T ss_pred             CCccEEeccCCCCCCCHHHHHHHHHHHhcccccccc-hhhcccc----hHHHHHHHHHHHHhCCCe---EEEE-CCHHHH
Confidence            344566666788899999999999887543221110 0111222    346789999999999873   4555 678899


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChh--H--HHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSW--G--DKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~--~--~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      +..++.. +.+||+|++....++  +  .++.+..++.| +++.+...     + ..++++++  ++++|++|+++|.+|
T Consensus       155 l~l~l~~-l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~-----~-~t~~~dle~aI~~~TklV~~vh~sN  227 (464)
T PRK04311        155 VLLALNA-LAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT-----N-RTHLRDYEQAINENTALLLKVHTSN  227 (464)
T ss_pred             HHHHHHH-hCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC-----C-CCCHHHHHHhcCccCeEEEEEcCCC
Confidence            9987755 578999987654344  1  23333455677 76666542     1 23566776  789999999999988


Q ss_pred             C--cc--ccCC--CCccc-cCCCcEEEEeccCc-------C--CCCccccc-----cccEEEeCCCccccCCccEEEEEc
Q 043610          220 I--HG--VEFK--EYPSA-KNSTGILVADMSSN-------F--CSKPVDVT-----RFGVIYAGAQKNVGPSGVTIVIVR  278 (430)
Q Consensus       220 ~--tG--~~~p--ei~~~-~~~g~~lvvD~a~s-------~--G~~~idl~-----~~d~~~~s~~K~~gp~G~g~l~v~  278 (430)
                      +  +|  ...|  +|+++ +++|+++++|++++       +  +..| ++.     ..|++++|+|||+|.+..|+++++
T Consensus       228 ~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p-~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~  306 (464)
T PRK04311        228 YRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP-TVQELLAAGVDLVTFSGDKLLGGPQAGIIVGK  306 (464)
T ss_pred             ccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC-chhhHHhcCCcEEEecCcccccCCceEEEEEc
Confidence            6  45  4456  67776 78999999998532       1  1233 332     248999999999963357999999


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH-------hcC---HHHHHHHHHHHHHHHHHHHH
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE-------LGG---LNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~-------~~g---~~~v~~~~~~l~~~l~~~l~  348 (430)
                      +++++.+.. .|....+           ...-..+.++...|.....       .-+   +....+++.+.+..+.++|.
T Consensus       307 ~~li~~l~~-~~~~r~l-----------r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~  374 (464)
T PRK04311        307 KELIARLKK-HPLKRAL-----------RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALK  374 (464)
T ss_pred             HHHHHHHhh-chhHHHH-----------hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHH
Confidence            999876542 1110000           0111233444444442211       001   12222455556666777776


Q ss_pred             ccC--Cc--eecCC--------CCCCCccceEEEEcCCCchhH-HHHHHHHHcC--CeecCCCCCCCeeEEeecCCCCHH
Q 043610          349 GSN--GF--YKCPV--------EKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEK--MVQLKGHRSVGGMRASIYNAMPLA  413 (430)
Q Consensus       349 ~~~--G~--~~~~~--------~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~G--i~~~~g~~~~g~iRis~~~~~t~e  413 (430)
                      +..  ++  ++.+.        .|....+. +.+.+.....+. ++.++|++-.  |+..   ...+.+.+-+- ...++
T Consensus       375 ~~~~~~~~~~~~~~~~~~gggs~p~~~~~~-~~v~~~~~~~~~~~l~~~lr~~~~~i~~r---~~~~~~~ld~r-~~~~~  449 (464)
T PRK04311        375 AALGAAFAVEVVPSFSQVGGGSLPVDRLPS-AAVTLTPKDRSLEALAARLRLLPPPVIGR---IEDGRLLLDLR-TLEEE  449 (464)
T ss_pred             hccCCCeeEEEEEccCccCCCCCcCCCCCe-EEEEEeCCCCCHHHHHHHHhcCCCCEEEE---EECCEEEEEeC-cCCHH
Confidence            532  22  33321        12222222 333343223344 6888888643  3332   22345666654 34688


Q ss_pred             HHHHHHHHHHHHHH
Q 043610          414 GVEKLVAFMKDFQA  427 (430)
Q Consensus       414 dv~~ll~~L~~~~~  427 (430)
                      |++.+++.|++++.
T Consensus       450 ~~~~~~~~~~~~~~  463 (464)
T PRK04311        450 DEERLAAALLEALN  463 (464)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998764

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.77  E-value=4.6e-17  Score=174.36  Aligned_cols=302  Identities=13%  Similarity=0.046  Sum_probs=191.4

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC----C---CCC-cEEEEeCChhHHHHHHHHHHhC-
Q 043610          111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC----T---PND-PVDYIVTGSWGDKAFKEAQKFC-  181 (430)
Q Consensus       111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~----~---~gd-~vl~~~~g~~~~~~~~~a~~~g-  181 (430)
                      +...+++.+..+.+++++|.+.   +-+-.++++.|..+.++.+-    .   +++ ++++....+.++..  .+...| 
T Consensus       539 QG~lq~i~elq~~l~eLtGmd~---~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa--sa~~~Gi  613 (954)
T PRK12566        539 EGYRAMIDELEAWLCAITGFDA---ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA--SAQMAGM  613 (954)
T ss_pred             cCHHHHHHHHHHHHHHHHCCCe---EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH--HHHHCCC
Confidence            3467889999999999999974   44555678877766665531    1   333 44444433322222  245568 


Q ss_pred             CceEEecCCCCcCCCCCCccccc--cC---CCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc-
Q 043610          182 NPQVIWSGKAEKYTKIPNFDALE--QN---PDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD-  252 (430)
Q Consensus       182 ~~~~v~~~~~~~~g~~~d~~~l~--i~---~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-  252 (430)
                      +++.++.++   .| .+|+++|+  ++   +++.+|.++++++..+...|  +|+++ +++|+++++|+++..+...++ 
T Consensus       614 eVv~Vp~D~---~G-~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~  689 (954)
T PRK12566        614 RVVIVECDP---DG-NVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLAR  689 (954)
T ss_pred             EEEEeccCC---CC-CcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCC
Confidence            888887753   45 58999887  54   67888889998887666565  78886 789999999999998887766 


Q ss_pred             cccc--cEEEeCCCcccc-CCccEEEEEcH-HHHhccCCCCCcc--ccccchhhcCCCCCCc---cHHHHHHHHHHHHHH
Q 043610          253 VTRF--GVIYAGAQKNVG-PSGVTIVIVRK-DLLGNAQDKTPLM--LDYKIHDENNSLYNTP---PCYCIYMCGLVFEYL  323 (430)
Q Consensus       253 l~~~--d~~~~s~~K~~g-p~G~g~l~v~~-~~~~~~~~~~p~~--~~~~~~~~~~~~~~T~---~~~~~~a~~~al~~l  323 (430)
                      ..++  |++++++|||++ |.|.|..++.+ ...+.+.+..|.+  .+..   ....+.++.   ++.....+..++.++
T Consensus       690 Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~---G~~~r~ga~S~~~~gsa~~l~~A~~Yi  766 (954)
T PRK12566        690 PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVE---GPDPNNGAVSAAPWGSASILPISWMYI  766 (954)
T ss_pred             hhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCC---CCCCCCCceeecccchHHHHHHHHHHH
Confidence            3555  799999999996 99988888777 4444433322211  1110   010111322   122223345566666


Q ss_pred             HHhcCHHHHHHHH--HHHHHHHHHHHHccCCceecCCCCC-CC---ccceEEEEcCC-CchhH-HHHHHHHHcCCeecC-
Q 043610          324 LELGGLNEVEKMN--RKKAELLYNVIDGSNGFYKCPVEKS-VR---SFMNVPFTLEK-SDLEA-EFVKEAAKEKMVQLK-  394 (430)
Q Consensus       324 ~~~~g~~~v~~~~--~~l~~~l~~~l~~~~G~~~~~~~~~-~r---s~~iv~f~~~~-~~~~~-~~~~~L~~~Gi~~~~-  394 (430)
                      .. .|.+.++.+.  ..+++++.++|.+  ++.+.. .+. .+   ...+..+.+++ .+.+. ++.++|.+.||.... 
T Consensus       767 ~~-lG~eLk~aa~~ailnAnYla~rL~~--~~~v~~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~  842 (954)
T PRK12566        767 AM-MGPQLADASEVAILSANYLANQLGG--AFPVLY-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTM  842 (954)
T ss_pred             HH-HCHHHHHHHHHHHHHHHHHHHHhHh--hCCCCc-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEE
Confidence            53 4666333333  6688999999986  344432 211 11   11112222332 12333 699999998887421 


Q ss_pred             CCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          395 GHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       395 g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      -+...+.+||++.-+++++|+|+|+++|+.+.+.
T Consensus       843 ~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e  876 (954)
T PRK12566        843 SFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE  876 (954)
T ss_pred             eeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence            1112457999999999999999999999987653

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.76  E-value=8.2e-17  Score=162.69  Aligned_cols=242  Identities=10%  Similarity=0.016  Sum_probs=156.8

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-H-HHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-A-FKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~-~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..++++.+++++|.+   +++++ +||+.|+..++.+++++||+|++..+.+.+.. . ...++..| +++.++.     
T Consensus        66 ~~~Le~~iA~~~g~~---~~l~~-~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----  136 (400)
T PRK06234         66 STEVENKLALLEGGE---AAVVA-ASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT-----  136 (400)
T ss_pred             HHHHHHHHHHHhCCC---cEEEE-cCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC-----
Confidence            458889999999975   34554 78899999999888999999987665443322 1 12344567 6655543     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCC--CcEEEEeccCcCCCCccccc-cccEEEeCCCc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNS--TGILVADMSSNFCSKPVDVT-RFGVIYAGAQK  265 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~--g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K  265 (430)
                          .|+++++  +++++++|++++++|+||.+.|  +|.++ +++  |+++++|++++.+.....+. ..|+++.|++|
T Consensus       137 ----~d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK  212 (400)
T PRK06234        137 ----SNLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATK  212 (400)
T ss_pred             ----CCHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccc
Confidence                2566776  7889999999999999999999  78886 554  99999999988765422222 34899999999


Q ss_pred             cccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          266 NVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       266 ~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      +++.+|   .|+++.++++++.++..     ...   .  ....+.+....+.+...|+      -++.+.++..+.+.+
T Consensus       213 ~l~g~g~~~gG~v~~~~~~~~~l~~~-----~~~---~--~~g~~l~p~~a~l~~~~l~------tl~~r~~~~~~na~~  276 (400)
T PRK06234        213 YLNGHGDVIAGFVVGKEEFINQVKLF-----GIK---D--MTGSVIGPFEAFLIIRGMK------TLQIRMEKHCKNAMK  276 (400)
T ss_pred             cccCCCCceeEEEEecHHHHHHHHHH-----HHH---H--hcCCCCCHHHHHHHHhccC------cHHHHHHHHHHHHHH
Confidence            997555   49999998877654210     000   0  0112334333333333333      245666777788888


Q ss_pred             HHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCCchhH--HHHHHHHHc
Q 043610          343 LYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKSDLEA--EFVKEAAKE  388 (430)
Q Consensus       343 l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~~~  388 (430)
                      +.++|++.+.+.-  +|.   .+.        ....++++|.+++ +.+.  +|++.|+--
T Consensus       277 ~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~-~~~~~~~f~~~l~~~  336 (400)
T PRK06234        277 VAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG-GVEEGKVVMNNVKLA  336 (400)
T ss_pred             HHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhCCcc
Confidence            8888886443221  111   111        1234678999974 2222  577766543

>PLN02242 methionine gamma-lyase

Probab=99.76  E-value=8.7e-17  Score=163.01  Aligned_cols=282  Identities=14%  Similarity=0.045  Sum_probs=178.3

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH-H-HH-HHHhC-CceEEecCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA-F-KE-AQKFC-NPQVIWSGK  190 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~-~-~~-a~~~g-~~~~v~~~~  190 (430)
                      ...+++++.+++++|...   ++++ +||++|+..++.+++++||+|++..+.+.+... . .. .+..| +++.+.   
T Consensus        76 Pt~~~LE~~lA~l~g~~~---~l~~-~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d---  148 (418)
T PLN02242         76 PTVLNLGRQMAALEGTEA---AYCT-ASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD---  148 (418)
T ss_pred             hhHHHHHHHHHHHhCCCe---EEEE-ccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC---
Confidence            345688999999999874   4554 789999999999999999999876655443321 1 11 12245 433232   


Q ss_pred             CCcCCCCCCccccc--cCC-CccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc-cccccccEEEeCC
Q 043610          191 AEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP-VDVTRFGVIYAGA  263 (430)
Q Consensus       191 ~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~-idl~~~d~~~~s~  263 (430)
                            ..|+++++  +++ ++++|++++++|+||.+.|  +|.++ +++|+++++|.+++.+... .++ ..|+++.|+
T Consensus       149 ------~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~~~~-g~divv~S~  221 (418)
T PLN02242        149 ------ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSPARL-GADVVVHSI  221 (418)
T ss_pred             ------CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCHHHc-CCcEEEEeC
Confidence                  23667776  677 5999999999999999999  78886 6899999999998754432 222 247999999


Q ss_pred             CccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          264 QKNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       264 ~K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      +|+++..|   .|+++.++++++.+......         .....| ++...+.+...+..    ...+..+.+++.+.+
T Consensus       222 SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~---------~~~~~g-~~~~~~~A~l~~~~----l~tl~~r~~~~~~~a  287 (418)
T PLN02242        222 SKFISGGADIIAGAVCGPAELVNSMMDLHHG---------ALMLLG-PTMNPKVAFELSER----LPHLSLRMKEHCRRA  287 (418)
T ss_pred             ccccCCCCCceEEEEEcCHHHHHHHHHHhhh---------hhhccC-CCCCHHHHHHHHcC----CCcHHHHHHHHHHHH
Confidence            99997655   48888888887764321100         000112 22222233222222    123566777889999


Q ss_pred             HHHHHHHHccCCceecCCC----CC-----------CCccceEEEEcCCCchhHHHHHHHHHc----CCeecCC------
Q 043610          341 ELLYNVIDGSNGFYKCPVE----KS-----------VRSFMNVPFTLEKSDLEAEFVKEAAKE----KMVQLKG------  395 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~~~~~----~~-----------~rs~~iv~f~~~~~~~~~~~~~~L~~~----Gi~~~~g------  395 (430)
                      +++.++|.+ .++.+..+.    +.           .....+++|.+.+.....+|++.|+--    .+....|      
T Consensus       288 ~~la~~L~~-~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~  366 (418)
T PLN02242        288 MEYAKRMKE-LGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQNSTQFGFMAVSLGYYETLM  366 (418)
T ss_pred             HHHHHHHHh-CCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhhcccccceeeecCCCCCcee
Confidence            999999997 466665211    11           123467889986311111577766511    1111111      


Q ss_pred             -------CC------------CCCeeEEeecCCCCHH-HHHHHHHHHHHHHHhh
Q 043610          396 -------HR------------SVGGMRASIYNAMPLA-GVEKLVAFMKDFQAKH  429 (430)
Q Consensus       396 -------~~------------~~g~iRis~~~~~t~e-dv~~ll~~L~~~~~~~  429 (430)
                             +.            ..+-||+|++.    | |++.|++-|+..++++
T Consensus       367 ~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~~al~~~  416 (418)
T PLN02242        367 SCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFEKALSAM  416 (418)
T ss_pred             eCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHh
Confidence                   00            12469999996    5 3777777777776654

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.76  E-value=1.6e-16  Score=173.86  Aligned_cols=299  Identities=12%  Similarity=0.068  Sum_probs=183.7

Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc----CCCCC----cEEEEeCChhHHHHHHHHHHhC-C
Q 043610          112 EFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL----CTPND----PVDYIVTGSWGDKAFKEAQKFC-N  182 (430)
Q Consensus       112 ~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl----~~~gd----~vl~~~~g~~~~~~~~~a~~~g-~  182 (430)
                      ...+++.+..+++++++|.+   ++.+..++++.|..+.+..+    .++|+    .|++....|.+..  ..+...| +
T Consensus       539 G~l~~i~e~q~~l~eltG~d---~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp--~sa~~~G~~  613 (954)
T PRK05367        539 GYRELIDQLEAWLAEITGYD---AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNP--ASAVMAGMK  613 (954)
T ss_pred             HHHHHHHHHHHHHHHHHCCC---CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhH--HHHHHCCCE
Confidence            37789999999999999987   35665667777664433332    24565    3665555555543  2345668 8


Q ss_pred             ceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc-c
Q 043610          183 PQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD-V  253 (430)
Q Consensus       183 ~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-l  253 (430)
                      +++++...   .| .+|+++|+  +++   ++.+|+++++++..+...|  +|+++ +++|++++||+++..+...+. .
T Consensus       614 vv~v~~d~---~G-~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~p  689 (954)
T PRK05367        614 VVVVACDE---NG-NIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARP  689 (954)
T ss_pred             EEEECCCC---CC-CcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCCh
Confidence            88887753   34 57888886  543   4677888887776333466  78886 789999999999986654432 1


Q ss_pred             cc--ccEEEeCCCcccc-CCc-----cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHH---HHHHHHHHHHH
Q 043610          254 TR--FGVIYAGAQKNVG-PSG-----VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCY---CIYMCGLVFEY  322 (430)
Q Consensus       254 ~~--~d~~~~s~~K~~g-p~G-----~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~---~~~a~~~al~~  322 (430)
                      .+  .|++++++||||+ |.|     +|++++++++...    .|... ........ ..|+....   ....+..+..+
T Consensus       690 g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~----lpg~~-v~~~~~~~-~~g~v~ta~~g~al~~~~a~~y  763 (954)
T PRK05367        690 GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPF----LPGHP-VQIAGGET-GIGAVSAAPFGSASILPISWMY  763 (954)
T ss_pred             hhcCCCEEEecCcccCCCCcCCCCCceEEEeeccccccc----CCCCc-cCcCCCCC-CcCcchhHHHHHHHHHHHHHHH
Confidence            22  3899999999974 554     7799998654322    22111 00000000 11233222   12233334444


Q ss_pred             HHHh--cCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC--CCCccceEEEE-cCCC-chhH-HHHHHHHHcCCeecC-
Q 043610          323 LLEL--GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK--SVRSFMNVPFT-LEKS-DLEA-EFVKEAAKEKMVQLK-  394 (430)
Q Consensus       323 l~~~--~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~--~~rs~~iv~f~-~~~~-~~~~-~~~~~L~~~Gi~~~~-  394 (430)
                      +...  .|+.++.++...+++++.++|.+.  +++.-..+  ......++.+. ++.. +... ++.++|.+.|+.... 
T Consensus       764 i~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~  841 (954)
T PRK05367        764 IRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTM  841 (954)
T ss_pred             HHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeec
Confidence            4321  245555555559999999999863  44321111  11112233332 2211 2233 799999999997532 


Q ss_pred             CCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          395 GHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       395 g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .....+.+||++.-+++++|+|+|+++|+.+.+
T Consensus       842 ~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~  874 (954)
T PRK05367        842 SFPVAGTLMVEPTESESKAELDRFCDAMIAIRA  874 (954)
T ss_pred             CCccCCEEEEEeeecCCHHHHHHHHHHHHHHHH
Confidence            222256799999999999999999999988765

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.76  E-value=8.7e-17  Score=160.87  Aligned_cols=276  Identities=13%  Similarity=0.042  Sum_probs=178.6

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+++-|..   ..+++ +||+.|+++++.+++++||+|++....+.+.. .. +.++++| ++.++..     
T Consensus        64 ~~~le~~la~LEg~~---~a~~~-~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-----  134 (395)
T PRK08114         64 HFSLQEAMCELEGGA---GCALY-PCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP-----  134 (395)
T ss_pred             HHHHHHHHHHHhCCC---eEEEE-hHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-----
Confidence            346778888888875   34555 67999999999999999999987665543322 22 3355678 6665542     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCC--CcEEEEeccCcCCCCccccccc--cEEEeCCC
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNS--TGILVADMSSNFCSKPVDVTRF--GVIYAGAQ  264 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~--g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~  264 (430)
                          .|.++++  ++++||+|++.++.|++|.+.|  +|+++ +++  |++++||.+++.|.. ++..++  |+++.|+|
T Consensus       135 ----~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~GaDivv~S~t  209 (395)
T PRK08114        135 ----LIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGIDISIQAGT  209 (395)
T ss_pred             ----CCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCCcEEEEcCc
Confidence                2445666  7889999999999999999999  78886 565  599999999998876 677666  79999999


Q ss_pred             ccc-cCC--ccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          265 KNV-GPS--GVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       265 K~~-gp~--G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      ||+ |+.  +.|+++.+++..+.+...   +.         ......+....+.+...|+      -+.-+.+|+.+.+.
T Consensus       210 Kyl~Ghsdv~~G~v~~~~~~~~~l~~~---~~---------~~G~~~~p~~a~l~~rgl~------TL~lR~~~~~~na~  271 (395)
T PRK08114        210 KYLVGHSDAMIGTAVANARCWEQLREN---SY---------LMGQMVDADTAYMTSRGLR------TLGVRLRQHEESSL  271 (395)
T ss_pred             ccccCCCcceeEEEEcCHHHHHHHHHH---HH---------hccCCCCHHHHHHHHcCCC------cHHHHHHHHHHHHH
Confidence            999 564  578888887765543210   00         1122444444443333332      35567788888888


Q ss_pred             HHHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCC-chhH--HHHHHHHHcCCe---------ec---
Q 043610          342 LLYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKS-DLEA--EFVKEAAKEKMV---------QL---  393 (430)
Q Consensus       342 ~l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~-~~~~--~~~~~L~~~Gi~---------~~---  393 (430)
                      .+.++|++.+.+.-  +|-   .+.        .....+++|.+++. +.+.  +|++.|+--.+.         +.   
T Consensus       272 ~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~  351 (395)
T PRK08114        272 KVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGGFESLILANQ  351 (395)
T ss_pred             HHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCCccceeccCC
Confidence            99999987543321  121   111        12346899998742 1222  355554321111         11   


Q ss_pred             C---CC--------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          394 K---GH--------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       394 ~---g~--------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +   .+        ...+-||+|++.    ||++.|++-|+..+++
T Consensus       352 ~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~~  393 (395)
T PRK08114        352 PEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFAR  393 (395)
T ss_pred             chhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence            0   00        112469999996    6677777666665543

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.76  E-value=1.2e-16  Score=160.31  Aligned_cols=237  Identities=16%  Similarity=0.097  Sum_probs=154.2

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHH-HHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAF-KEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~-~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+++.|..   +++++ +|+++++.+++.+++++||+|++..+.+.+. ... ....+.| ++..+.      
T Consensus        55 ~~~Le~~lA~leg~e---~ivvt-~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd------  124 (388)
T PRK08861         55 RGLLEQTLSELESGK---GAVVT-NCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVD------  124 (388)
T ss_pred             HHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEEC------
Confidence            457889999999963   67765 7899999999999999999999776654432 222 2223345 444332      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~K~  266 (430)
                         ..|+++++  +++++++|++++++||||.++|  +|.++ +++|+++++|+++..+.  .|+++ ..|+++.|+|||
T Consensus       125 ---~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl~~-GaDivv~S~tK~  200 (388)
T PRK08861        125 ---QSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPLEL-GADFVIHSTTKY  200 (388)
T ss_pred             ---CCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCccc-CCCEEEeeccee
Confidence               24566776  6789999999999999999999  78876 68899999999988654  45554 358999999999


Q ss_pred             c-cCCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 V-GPSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~-gp~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      + |+.+  .|+++.++ ++.+++..       +.     .....+.+.+..+.+...|+      -+.-+.+++.+.+..
T Consensus       201 l~G~~d~~gG~i~~~~~~~~~~~~~-------~~-----~~~G~~~~p~~a~l~~rgl~------Tl~lR~~~~~~~a~~  262 (388)
T PRK08861        201 INGHSDVIGGVLITKTKEHAEELAW-------WG-----NCIGATGTPFDSYMTLRGIR------TLGARMRVHEESAQQ  262 (388)
T ss_pred             ccCCCcceeEEEEecHHHHHHHHHH-------HH-----hccCCCCChHHHHHHHhcCC------CHHHHHHHHHHHHHH
Confidence            9 5765  46666644 44333211       00     01223444444443333332      356677788888888


Q ss_pred             HHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCCchhH--HHHHHHH
Q 043610          343 LYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       343 l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                      +.++|++.+.+.-  +|.   .+.        ....++++|.+.+ +.+.  +|++.|+
T Consensus       263 ~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~~f~~~l~  320 (388)
T PRK08861        263 ILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG-SFEQLKVFVKALA  320 (388)
T ss_pred             HHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHhcCC
Confidence            8889987544321  121   110        1135688999974 2222  4555543

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.76  E-value=9.6e-17  Score=161.64  Aligned_cols=277  Identities=13%  Similarity=0.044  Sum_probs=175.3

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-H-HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-K-AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~-~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.+++++|.+.   .+++ +||+.|+..++.+++++||+|++....+.+. . +...+...| ++..++.     
T Consensus        61 ~~~le~~lA~l~g~~~---av~~-~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~-----  131 (391)
T TIGR01328        61 VSNLEGRIAFLEGTEA---AVAT-SSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM-----  131 (391)
T ss_pred             HHHHHHHHHHHhCCCc---EEEE-CCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC-----
Confidence            4588899999999874   3444 6789999999999889999998765433222 1 222344556 5554433     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCccc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNV  267 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~  267 (430)
                          .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+.....+. ..|+++.|++|++
T Consensus       132 ----~d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~l  207 (391)
T TIGR01328       132 ----AIPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYI  207 (391)
T ss_pred             ----CCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccc
Confidence                2456665  6889999999999999999999  78886 78999999999998765432222 2379999999999


Q ss_pred             cCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          268 GPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       268 gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      |.+|   .|+++.++++++.++...     .     .....+.++....+.+...|+      -+..+.++..+.+..+.
T Consensus       208 gg~g~~~gG~v~~~~~li~~l~~~~-----~-----~~~~g~~l~~~~a~l~l~~L~------tl~~r~~~~~~na~~la  271 (391)
T TIGR01328       208 GGHGDVVAGLICGKAELLQQIRMVG-----I-----KDMTGSVISPFDAWLILRGLK------TLNIRMKRHSENAMKVA  271 (391)
T ss_pred             cCCCCceEEEEEcCHHHHHHHHHHH-----H-----HhCCCCCCCcHHHHHHHhCcC------cHHHHHHHHHHHHHHHH
Confidence            7544   477888888877543100     0     000112333322222222332      34566777888888999


Q ss_pred             HHHHccCCceec--CC---CCCC--------CccceEEEEcCCCchhH--HHHHHHHHc--CCe--------ecC---CC
Q 043610          345 NVIDGSNGFYKC--PV---EKSV--------RSFMNVPFTLEKSDLEA--EFVKEAAKE--KMV--------QLK---GH  396 (430)
Q Consensus       345 ~~l~~~~G~~~~--~~---~~~~--------rs~~iv~f~~~~~~~~~--~~~~~L~~~--Gi~--------~~~---g~  396 (430)
                      ++|++.+++..+  |.   .+.+        ...++++|.+++ +.+.  +|++.|+--  +.-        ..+   .+
T Consensus       272 ~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~  350 (391)
T TIGR01328       272 EYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG-GFAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTH  350 (391)
T ss_pred             HHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHHhCCcceEecCCCCCcccCcCCCcccc
Confidence            999876554422  21   1111        124689999874 2222  455555321  110        001   01


Q ss_pred             C------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          397 R------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       397 ~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .            ..+-||+|++.    ||++.|++-|+..++
T Consensus       351 ~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~  389 (391)
T TIGR01328       351 AVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALD  389 (391)
T ss_pred             ccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence            0            13469999996    677777777776654

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK08354 putative aminotransferase; Provisional

Probab=99.76  E-value=8.5e-16  Score=150.32  Aligned_cols=287  Identities=14%  Similarity=0.102  Sum_probs=169.9

Q ss_pred             CceeecCCCCC-CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           70 RVFNFAAGPAN-LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        70 ~~~l~~~gp~~-~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      .++.|+.|..+ .|+.+++++.+.+..          .+. .+.    ...+|+.+++++|.    +|++ ++|+++++.
T Consensus         9 ~~i~l~~~~np~~p~~~~~a~~~~~~~----------~~~-yp~----~~~l~~~ia~~~~~----~I~v-t~G~~~al~   68 (311)
T PRK08354          9 GLIDFSASVNPYPPEWLDEMFERAKEI----------SGR-YTY----YEWLEEEFSKLFGE----PIVI-TAGITEALY   68 (311)
T ss_pred             ceeEecCCCCCCCCHHHHHHHHHHHHH----------hhc-CCC----hHHHHHHHHHHHCC----CEEE-CCCHHHHHH
Confidence            35555555322 257888888766532          111 122    23578899999982    5665 588999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCccccCC
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      .++. ++.+||+|++..+.+.++.  ..++..| ++..+          .+|++.++ .-.+++++++++++||||..++
T Consensus        69 ~~~~-~~~~gd~vlv~~P~y~~~~--~~~~~~g~~~~~~----------~~d~~~l~~~~~~~~~vi~~~P~NPTG~~~~  135 (311)
T PRK08354         69 LIGI-LALRDRKVIIPRHTYGEYE--RVARFFAARIIKG----------PNDPEKLEELVERNSVVFFCNPNNPDGKFYN  135 (311)
T ss_pred             HHHH-hhCCCCeEEEeCCCcHHHH--HHHHHcCCEEeec----------CCCHHHHHHhhcCCCEEEEecCCCCCCCccC
Confidence            8774 4458999998877766542  3556667 55322          14556665 2236788999999999999999


Q ss_pred             --CCc---cc-cCCCcEEEEeccCcCCC-Cccccc-cccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCcccccc
Q 043610          227 --EYP---SA-KNSTGILVADMSSNFCS-KPVDVT-RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYK  296 (430)
Q Consensus       227 --ei~---~~-~~~g~~lvvD~a~s~G~-~~idl~-~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~  296 (430)
                        ++.   ++ +++|+++++|+++.-.. ...... +.-+++.|++|.+|.+|  +|++++-.+.+....          
T Consensus       136 ~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRiG~~v~~~~~l~~~~----------  205 (311)
T PRK08354        136 FKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVKGFEEAFRSVR----------  205 (311)
T ss_pred             HHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccceeeeeeehHHHHHHcC----------
Confidence              443   33 57899999999874221 111111 11277899999999889  798887333322211          


Q ss_pred             chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc
Q 043610          297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       297 ~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~  376 (430)
                             ...+.+...+.++...++     .+.+.+.+.    .+.+++..+...+.-..  .+  .++. +.+.+++  
T Consensus       206 -------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~~~~~~~~l~~~l~~--~~--~~~~-~~~~~~~--  262 (311)
T PRK08354        206 -------MPWSIGSTGYAFLEFLIE-----DDFEHLRKT----MPLIWREKERFEKALYV--KS--DANF-FIKDVGD--  262 (311)
T ss_pred             -------CCccCCHHHHHHHHHHHH-----hHHHHHHHH----HHHHHHHHHHHHHhcCC--CC--CCcE-EEEECCC--
Confidence                   011233333333322222     122322222    22222222211011111  11  1222 2234432  


Q ss_pred             hhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          377 LEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       377 ~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       +.++.+.|.++||.+.+|..  ..+++||+++   ..++.++++++|+++.
T Consensus       263 -~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~~  310 (311)
T PRK08354        263 -AEKFVEFLKRNGILVRDCTSFGLPGYIRFSVR---DREENEKLIRALREWR  310 (311)
T ss_pred             -HHHHHHHHHHCCeEEEecccCCCCCeEEEEeC---CHHHHHHHHHHHHHhh
Confidence             34799999999999988643  2468999998   5888999999998863

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.76  E-value=1.1e-16  Score=160.68  Aligned_cols=275  Identities=14%  Similarity=0.058  Sum_probs=172.7

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.++++.|.+   +++++ +|+++|+..++.+++++||+|++..+.+.+..  +.......+ ++..+.      
T Consensus        53 ~~~le~~lA~l~g~~---~v~~~-~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d------  122 (382)
T TIGR02080        53 RDLLQQALAELEGGA---GAVVT-NTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVD------  122 (382)
T ss_pred             HHHHHHHHHHHhCCC---cEEEE-cCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEEC------
Confidence            447788999999953   56664 78999999999999999999987766654322  212222233 332221      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                         ..|+++++  +++++|+|++++++|+||.+.|  +|.++ +++|+++++|++++.+..  ++++ ..|+++.|++||
T Consensus       123 ---~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl~~-gaDivv~S~sK~  198 (382)
T TIGR02080       123 ---QGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPLAL-GADLVLHSCTKY  198 (382)
T ss_pred             ---CCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCchhh-CCCEEEeeccee
Confidence               13556676  6788999999999999999999  78886 688999999999876653  3332 238999999999


Q ss_pred             c-cCCc--cEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 V-GPSG--VTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~-gp~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      + |+.|  .|++.+ ++++.+++..    +.+        ....+.+....+.+...++      -+..+.++..+.+..
T Consensus       199 l~G~~~~~~G~i~~~~~~~~~~l~~----~~~--------~~g~~~sp~~a~l~lr~l~------tl~~R~~~~~~na~~  260 (382)
T TIGR02080       199 LNGHSDVIAGAVIAKDPQVAEELAW----WAN--------NLGVTGGAFDSYLTLRGLR------TLVARMRLQQRNAQA  260 (382)
T ss_pred             ccCCCCceeEEEEeCCHHHHHHHHH----HHH--------ccCCCCCHHHHHHHHcccc------hHHHHHHHHHHHHHH
Confidence            9 5776  677666 4556554321    000        1112344443333333333      245556777788888


Q ss_pred             HHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCCchhH--HHHHHHHHcCCeec----------C---
Q 043610          343 LYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKSDLEA--EFVKEAAKEKMVQL----------K---  394 (430)
Q Consensus       343 l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~~~Gi~~~----------~---  394 (430)
                      +.++|++.+.+..  +|.   .+.        ....++++|.+++ +.+.  +|++.|+--.+...          +   
T Consensus       261 ~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~  339 (382)
T TIGR02080       261 IVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG-GEQTVRRFLGGLSLFTLAESLGGVESLIAHPATM  339 (382)
T ss_pred             HHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC-cHHHHHHHHHcCCcceEeccCCCCcceeECCCcc
Confidence            8888886443331  121   110        1234689999974 2222  45555542111110          1   


Q ss_pred             CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          395 GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       395 g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.            ..+-||+|++.    ||++.+++-|+..+++
T Consensus       340 ~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~~  381 (382)
T TIGR02080       340 THAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLRA  381 (382)
T ss_pred             CcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence            110            13469999995    7788888877776653

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.76  E-value=3.3e-16  Score=158.61  Aligned_cols=307  Identities=11%  Similarity=0.078  Sum_probs=194.1

Q ss_pred             cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC-----
Q 043610           82 PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT-----  156 (430)
Q Consensus        82 ~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~-----  156 (430)
                      .|.|.+++.+.+.++.. +.    ....    .....++++.|+++++.+   .++++ +|||+|++.++..+..     
T Consensus        59 ~~~i~~a~~~~~~~~~~-~~----~~~~----~~~~~~l~~~l~~~~~~~---~~~~~-~SGs~A~e~al~~a~~~~~~~  125 (401)
T PRK00854         59 HPKILAAMVEQAGRLTL-TS----RAFR----NDQLAPLYEELAALTGSH---KVLPM-NSGAEAVETAIKAVRKWGYEV  125 (401)
T ss_pred             CHHHHHHHHHHHhhccc-cc----cccC----CHHHHHHHHHHHhhCCCC---EEEEe-CCcHHHHHHHHHHHHHHHHhc
Confidence            88999999999875321 11    0011    134567888899998863   67776 7899999988776621     


Q ss_pred             ----CC-CcEEEEeCChhHHHHHHHHHHhC-CceE---EecCCCCcCC--CCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          157 ----PN-DPVDYIVTGSWGDKAFKEAQKFC-NPQV---IWSGKAEKYT--KIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       157 ----~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~---v~~~~~~~~g--~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                          +| ++|+++...+.|.-.  .+...+ ....   .....+ +..  ...|+++++  +.+++++|++.++.+++|.
T Consensus       126 ~g~~~~~~~vi~~~~~~HG~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~  202 (401)
T PRK00854        126 KGVPEGQAEIIVCADNFHGRTL--SIVGFSTDPDARGGFGPFTP-GFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGV  202 (401)
T ss_pred             cCCCCCCceEEEECCCcCCccH--HHHhccCCccccccCCCCCC-CeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCC
Confidence                23 577777766555311  111111 1100   000000 000  013566776  6788999999999999999


Q ss_pred             cCC---CCcc---c-cCCCcEEEEeccCc-CCCCcc----cccc--ccEEEeCCCccccCC--ccEEEEEcHHHHhccCC
Q 043610          224 EFK---EYPS---A-KNSTGILVADMSSN-FCSKPV----DVTR--FGVIYAGAQKNVGPS--GVTIVIVRKDLLGNAQD  287 (430)
Q Consensus       224 ~~p---ei~~---~-~~~g~~lvvD~a~s-~G~~~i----dl~~--~d~~~~s~~K~~gp~--G~g~l~v~~~~~~~~~~  287 (430)
                      +.|   .+.+   + +++|+++++|++|+ +|....    +...  .|+++.  .|+++-.  -+|+++.++++++.+.+
T Consensus       203 ~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~--~K~l~gg~~~ig~v~~~~~~~~~l~~  280 (401)
T PRK00854        203 IIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLI--GKALSGGFYPVSAVLSNSEVLGVLKP  280 (401)
T ss_pred             cCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEe--cccccCCccCeEEEEEcHHHHhcccC
Confidence            997   2444   3 58999999999988 665431    1111  266665  4999421  26888889988775432


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..           .+.++ +.+...++++.++|+.+.+    +.+.++.+++++++++.|++ .+..... ...... .+
T Consensus       281 ~~-----------~~~t~-~~~~~~~aa~~a~L~~l~~----~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~~g~g-~~  341 (401)
T PRK00854        281 GQ-----------HGSTF-GGNPLACAVARAALKVLTE----EGMIENAAEMGAYFLEGLRS-IRSNIVR-EVRGRG-LM  341 (401)
T ss_pred             CC-----------CCCCC-CcCHHHHHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHh-hccCceE-EEeccc-eE
Confidence            10           11122 3466778888889987653    23568888888999999986 4433211 111122 34


Q ss_pred             EEEEcCCCc-hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          368 VPFTLEKSD-LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       368 v~f~~~~~~-~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +.+.+.+.. ...++.+.|.++||.+...  ..+.+|++++..++++||+++++.|++++.
T Consensus       342 ~~i~~~~~~~~~~~~~~~L~~~GV~v~~~--~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~  400 (401)
T PRK00854        342 LAVELEPEAGGARQYCEALKERGLLAKDT--HDHTIRLAPPLVITREQVDWALEQIAKVLA  400 (401)
T ss_pred             EEEEEecCchhHHHHHHHHHHCCeEEecC--CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence            445443212 2337999999999998542  135799999989999999999999998764

>PRK06460 hypothetical protein; Provisional

Probab=99.75  E-value=8.9e-17  Score=161.10  Aligned_cols=277  Identities=13%  Similarity=0.076  Sum_probs=172.1

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChh-HHH-HHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSW-GDK-AFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~-~~~-~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+.  .+++  +||++++..++.++++|||+|++..+.+. .+. +...++..| ++..++..+ 
T Consensus        45 p~~~~L~~~lA~l~g~~~--~v~~--~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~-  119 (376)
T PRK06460         45 PTVLELTKKIVELENAEM--GVAF--SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGS-  119 (376)
T ss_pred             ccHHHHHHHHHHHhCCCc--EEEe--CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCC-
Confidence            445688999999999964  5554  56789999999999999999987654321 121 234456677 665554321 


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccc-ccccEEEeCCCc
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDV-TRFGVIYAGAQK  265 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl-~~~d~~~~s~~K  265 (430)
                              .+.++  +++++++|++++++||||.+.|  +|.++ +++|+++++|++++.+.....+ ...|+++.|++|
T Consensus       120 --------~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK  191 (376)
T PRK06460        120 --------DNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPLELGADIVVHSASK  191 (376)
T ss_pred             --------HHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChhhcCCCEEEeecce
Confidence                    12233  4678999999999999999999  78886 6889999999998755321112 124799999999


Q ss_pred             ccc-CCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          266 NVG-PSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       266 ~~g-p~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++| +.|  .|+++.++++++.+....          ..  ...+.+....+.+...++      .++.+.+++.+.+++
T Consensus       192 ~l~G~~~~~~G~~~~~~~l~~~l~~~~----------~~--~g~~~~~~~a~~~l~~~~------~l~~r~~~~~~n~~~  253 (376)
T PRK06460        192 FLAGHNDVIAGLAAGYGKLLNVIDQMR----------RT--LGTSLDPHAAYLTLRGIK------TLKIRMDVINRNAEQ  253 (376)
T ss_pred             eccCCCCceEEEEecCHHHHHHHHHHH----------Hh--cCCCCCHHHHHHHHhchh------hHHHHHHHHHHHHHH
Confidence            996 443  688888888876643210          00  111223222222222333      245677788888899


Q ss_pred             HHHHHHccCCceec--CC---CCC--------CCccceEEEEcCCCchhH--HHHHHHHH--c-----CCe---ecC---
Q 043610          343 LYNVIDGSNGFYKC--PV---EKS--------VRSFMNVPFTLEKSDLEA--EFVKEAAK--E-----KMV---QLK---  394 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~~---~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~~--~-----Gi~---~~~---  394 (430)
                      +.++|++.+.+.-+  |.   .+.        ....++++|.+.+ +.+.  +|++.|+-  .     |+-   ..+   
T Consensus       254 l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~-~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~  332 (376)
T PRK06460        254 IAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG-GQESALKVMKSLKLIIPAQTLGGVNSVISHPATM  332 (376)
T ss_pred             HHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC-cHHHHHHHHHhCCcceeccCCCCCceEEeCcccc
Confidence            99999875443211  10   110        1234678999874 2222  45555431  1     111   011   


Q ss_pred             CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          395 GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       395 g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .++            ..+-||+|++.    ||.+.|++-|+..++
T Consensus       333 ~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~  373 (376)
T PRK06460        333 SHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALS  373 (376)
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence            111            13469999996    667777766666654

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.75  E-value=5.5e-16  Score=157.80  Aligned_cols=202  Identities=14%  Similarity=0.147  Sum_probs=139.1

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      ...+|.++.|-+++++.|++++.+.+..+.+.... +..+.+    .+.++.+++.+++++|+++  . +++ +|++.|+
T Consensus        80 tg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~-l~~g~~----g~r~~~le~~lA~l~gae~--a-lvv-~sg~aAi  150 (454)
T TIGR00474        80 TGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYD-LETGKR----GSRYSHVEGLLCELTGAED--A-LVV-NNNAAAV  150 (454)
T ss_pred             CCcEEeccCCCCCCCHHHHHHHHHHHhcccchhcc-cccccc----chHHHHHHHHHHHHhCCCc--E-EEE-CCHHHHH
Confidence            34577777888999999999999988654321110 011122    2446789999999999974  3 444 6788999


Q ss_pred             HHHHhhcCCCCCcEEEEeCCh--hH--HHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          148 AAVPLNLCTPNDPVDYIVTGS--WG--DKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~--~~--~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      .+++. .+.+||+|++.+..+  ++  .+..+..++.| +++.+...     + ..++++++  ++++|++|++.|.+|+
T Consensus       151 ~l~l~-~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~-----~-~~~l~dle~aI~~~T~lv~~~h~sN~  223 (454)
T TIGR00474       151 LLALN-TLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT-----N-RTHLKDYEDAITENTALLLKVHTSNY  223 (454)
T ss_pred             HHHHH-HhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC-----C-CCCHHHHHHhcCcCCEEEEEEccCcc
Confidence            88874 468899998765332  22  12223455667 66655432     1 24566776  7899999999999887


Q ss_pred             c--c--ccCC--CCccc-cCCCcEEEEeccCc---------CCCCcc--cccc--ccEEEeCCCcccc-CCccEEEEEcH
Q 043610          221 H--G--VEFK--EYPSA-KNSTGILVADMSSN---------FCSKPV--DVTR--FGVIYAGAQKNVG-PSGVTIVIVRK  279 (430)
Q Consensus       221 t--G--~~~p--ei~~~-~~~g~~lvvD~a~s---------~G~~~i--dl~~--~d~~~~s~~K~~g-p~G~g~l~v~~  279 (430)
                      +  |  ...|  +|+++ +++|+++++|.++.         ++..|.  +..+  .|++++|+|||+| | ..|++++++
T Consensus       224 ~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~G~i~g~~  302 (454)
T TIGR00474       224 RIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QAGIIVGKK  302 (454)
T ss_pred             cccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eEEEEEECH
Confidence            4  6  4667  78886 78999999998632         223332  2222  3899999999995 6 469999999


Q ss_pred             HHHhccC
Q 043610          280 DLLGNAQ  286 (430)
Q Consensus       280 ~~~~~~~  286 (430)
                      ++++.+.
T Consensus       303 ~~i~~l~  309 (454)
T TIGR00474       303 ELIERLK  309 (454)
T ss_pred             HHHHhhh
Confidence            9887654

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.75  E-value=2.3e-16  Score=159.32  Aligned_cols=237  Identities=15%  Similarity=0.045  Sum_probs=153.3

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.|+++.|.+.  .+ ++ +||++++..++.++++|||+|++..+.+.+..  +...++..| ++..++.     
T Consensus        62 ~~~Le~~lA~l~g~~~--~v-~~-~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~-----  132 (405)
T PRK08776         62 RDLLGEALAELEGGAG--GV-IT-ATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL-----  132 (405)
T ss_pred             HHHHHHHHHHHhCCCc--eE-EE-cCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC-----
Confidence            4567899999999853  44 44 56799999999999999999987665544321  222234445 4433321     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                          .|+++++  +++++++|++++++||||.+.|  +|.++ +++|+++++|++++.+..  |+++ ..|+++.|++|+
T Consensus       133 ----~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl~~-gaDivv~S~tK~  207 (405)
T PRK08776        133 ----TDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPLEF-GADLVLHSTTKY  207 (405)
T ss_pred             ----CCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcccc-cCCEEEecCcee
Confidence                3556665  6789999999999999999999  78886 688999999999876643  4432 237999999999


Q ss_pred             cc-CCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VG-PSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~g-p~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++ +.+  .|+++.+ +++.+++..       +.   .  ....+++....+.+...++.      ++.+.++..+.+..
T Consensus       208 l~g~~~~~~G~vv~~~~~l~~~l~~-------~~---~--~~g~~~s~~~a~l~~~gl~t------l~~r~~~~~~na~~  269 (405)
T PRK08776        208 INGHSDVVGGAVVARDAELHQQLVW-------WA---N--ALGLTGSPFDAFLTLRGLRT------LDARLRVHQENADA  269 (405)
T ss_pred             ecCCCCceEEEEEeCCHHHHHHHHH-------HH---H--hcCCCCCHHHHHHHHhhhCc------HHHHHHHHHHHHHH
Confidence            95 654  4766664 555444311       00   0  01123455555554444443      46677888888889


Q ss_pred             HHHHHHccCCceec--CCCCC-----------CCccceEEEEcCCCchhH--HHHHHHH
Q 043610          343 LYNVIDGSNGFYKC--PVEKS-----------VRSFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~~~~~-----------~rs~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                      +.++|++.+.+.-+  |.-++           ....++++|.+++ +.+.  +|++.|+
T Consensus       270 la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~  327 (405)
T PRK08776        270 IAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG-GEAAVRAFVDGLR  327 (405)
T ss_pred             HHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC-CHHHHHHHHHhCC
Confidence            99999875443321  11111           1234688999974 3222  4655554

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.75  E-value=1.3e-16  Score=161.22  Aligned_cols=322  Identities=13%  Similarity=0.053  Sum_probs=189.8

Q ss_pred             CCceeecCC----C-CCCc--HHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEE-EE
Q 043610           69 DRVFNFAAG----P-ANLP--EKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSV-LF  138 (430)
Q Consensus        69 ~~~~l~~~g----p-~~~~--~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~v-v~  138 (430)
                      +.+++++.|    | ..+|  +.+.+++.+.+.+....+   |......+++   .+.+.+.+....+.  +++ +| ++
T Consensus        26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~---Y~~~~G~~~l---R~aia~~~~~~~~~~~~~~-~i~v~   98 (396)
T PRK09257         26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKN---YLPIEGLAAY---RQAVQELLFGADSPALAAG-RVATV   98 (396)
T ss_pred             cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCC---cCCCCCCHHH---HHHHHHHhcCCCCcccccC-eEEEE
Confidence            456888887    3 1233  677777766543211011   1111112222   23333333333222  344 55 34


Q ss_pred             EeCcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC---CCcc
Q 043610          139 LQGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN---PDAK  210 (430)
Q Consensus       139 ~~~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~---~~~~  210 (430)
                      +|+|+++|+..++..+  +.|||+|++.++++.++.  ..++..| +++.++...++++  .+|+++++  +.   ++++
T Consensus        99 iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~--~~~~~~g~~~v~v~~~~~~~~--~~d~~~l~~~~~~~~~~~~  174 (396)
T PRK09257         99 QTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHR--AIFEAAGLEVKTYPYYDAATK--GLDFDAMLADLSQAPAGDV  174 (396)
T ss_pred             ecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHH--HHHHHcCCcEEEEeccccccC--ccCHHHHHHHHHhCCCCCE
Confidence            5689999999987655  489999998887776653  3566678 8888876321124  47888876  32   4466


Q ss_pred             EEEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCCc-----cc---cccc-c--EEEeCCCccccCCc--
Q 043610          211 YLHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSKP-----VD---VTRF-G--VIYAGAQKNVGPSG--  271 (430)
Q Consensus       211 lv~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~~-----id---l~~~-d--~~~~s~~K~~gp~G--  271 (430)
                      ++++++++||||..++     +|.++ +++|++++.|.++.--...     ..   +... +  +++.|++|.++++|  
T Consensus       175 ~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlR  254 (396)
T PRK09257        175 VLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGER  254 (396)
T ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCcccccc
Confidence            7777999999999999     34554 5899999999986522111     11   1111 2  67899999999989  


Q ss_pred             cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHHHHHHH
Q 043610          272 VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       272 ~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l~~~l~  344 (430)
                      +||+++   +++.+..+...      .....  ....++++...+.++...|+.-  .+  ...++.++++++++++.+.
T Consensus       255 iG~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~  326 (396)
T PRK09257        255 VGALSVVAEDAEEADRVLSQ------LKATI--RTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLV  326 (396)
T ss_pred             ceeEEEEeCCHHHHHHHHHH------HHHHh--hhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888873   33433221000      00000  0112345666666666665421  00  1135678889999999999


Q ss_pred             HHHHccC---CceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610          345 NVIDGSN---GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       345 ~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~  420 (430)
                      +.|++..   ++.+..  +  .....+.+.+     +.+++.+| .++||.+.+.    +  ||+++. .++++++++++
T Consensus       327 ~~L~~~~~~~~~~~~~--p--~gg~~~w~~l-----~~~~~~~l~~~~~V~~~p~----~--ri~~~~-~~~~~i~~~~~  390 (396)
T PRK09257        327 EALKAKGPSRDFDFIA--R--QRGMFSYSGL-----TPEQVDRLREEFGVYAVGS----G--RINVAG-LNESNIDYVAE  390 (396)
T ss_pred             HHHHhcCCCCCccccc--c--cceEEEecCC-----CHHHHHHHHHcCCEEEcCC----C--eEEEee-CCHHHHHHHHH
Confidence            9998732   132221  1  1222222222     33455555 6679988752    2  999964 68899999999


Q ss_pred             HHHHH
Q 043610          421 FMKDF  425 (430)
Q Consensus       421 ~L~~~  425 (430)
                      .|+++
T Consensus       391 ~i~~~  395 (396)
T PRK09257        391 AIAAV  395 (396)
T ss_pred             HHHhh
Confidence            99875

>PLN02263 serine decarboxylase

Probab=99.75  E-value=1.3e-15  Score=154.03  Aligned_cols=288  Identities=11%  Similarity=0.031  Sum_probs=196.5

Q ss_pred             HHHHHHHHHHHHHHHHhCCCC-CcEEEEEeCcHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEe
Q 043610          112 EFKSIIEKAESDLRALLNIPQ-EYSVLFLQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIW  187 (430)
Q Consensus       112 ~~~~~~~~~r~~la~l~g~~~-~~~vv~~~~gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~  187 (430)
                      ...++..++-+.+++++|.++ ++.-++ ++|||+++..++...=  .+...+++.+..|++.  .+.++-+| +++.|+
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~v-tsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv--~KAa~llgi~~~~Vp  206 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYI-TNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRMECVKVD  206 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEE-eCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHH--HHHHHhcCCcceEec
Confidence            456777899999999999976 333455 5889999987655531  1222333344456653  34555678 888888


Q ss_pred             cCCCCcCCCCCCccccc--cCCC---ccEEEEeecCCCccccCC--CCccc-cCCCc-----EEEEeccCcCCCCc----
Q 043610          188 SGKAEKYTKIPNFDALE--QNPD---AKYLHICANETIHGVEFK--EYPSA-KNSTG-----ILVADMSSNFCSKP----  250 (430)
Q Consensus       188 ~~~~~~~g~~~d~~~l~--i~~~---~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~-----~lvvD~a~s~G~~~----  250 (430)
                      +.+   .+ .+|+++|+  +..+   +-+|+.+...|++|.+-|  +|.++ +++|+     |++|||+.+....|    
T Consensus       207 ~d~---~g-~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~  282 (470)
T PLN02263        207 TLV---SG-EIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKR  282 (470)
T ss_pred             cCC---CC-cCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccc
Confidence            753   34 58998886  5333   456778889999999999  78886 56665     99999987644443    


Q ss_pred             ---ccccc-ccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH
Q 043610          251 ---VDVTR-FGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE  325 (430)
Q Consensus       251 ---idl~~-~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~  325 (430)
                         +|+.. .|.+..++|||++ |.|+|+++++++.++.... .+.|+....    ....|+.+......+..+|+.+-.
T Consensus       283 ~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~-~~~Yl~~~d----~ti~gSR~g~~al~lW~~L~~~G~  357 (470)
T PLN02263        283 APKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRD----ATIMGSRNGHAPIFLWYTLNRKGY  357 (470)
T ss_pred             ccccCCCcCccEEEECCccccCCCcCEEEEEEehhhHhhhcc-ChHhhCCCC----CCcCCCCCcHHHHHHHHHHHHhCH
Confidence               23322 4789999999997 9999999999876644322 233442211    122356565445666677776653


Q ss_pred             hcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEe
Q 043610          326 LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRAS  405 (430)
Q Consensus       326 ~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis  405 (430)
                       .|+.+..+++.++++++.++|++ .|+..+. ++  .+ .+++|.-+.   + +.    ..+|+....   ....+++.
T Consensus       358 -~G~~~~i~~~~~~A~~l~~~l~~-~g~~~~~-~p--~s-~~V~f~~p~---~-~~----~~~gW~L~~---~~~~~Hiv  420 (470)
T PLN02263        358 -RGFQKEVQKCLRNAHYLKDRLRE-AGISAML-NE--LS-STVVFERPK---D-EE----FVRRWQLAC---QGNIAHVV  420 (470)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHh-CCCeEEe-CC--Cc-eEEEEecCc---h-HH----hhcceEEcc---CCCcEEEE
Confidence             48999999999999999999997 5887663 33  23 356776542   1 11    124554432   12359999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHHh
Q 043610          406 IYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       406 ~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++...+.+.+|+|++.|++..+.
T Consensus       421 vmphv~~~~id~fi~DL~~~~~~  443 (470)
T PLN02263        421 VMPSVTIEKLDYFLKELVEKRST  443 (470)
T ss_pred             EcCCCCHHHHHHHHHHHHHHHhh
Confidence            99988999999999999987653

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=99.75  E-value=2e-16  Score=146.61  Aligned_cols=351  Identities=12%  Similarity=0.133  Sum_probs=242.9

Q ss_pred             ccccCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCC--cHHHHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 043610           62 QIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHR--GKEFKSIIEKAESDLRALLNIPQEYSVLFL  139 (430)
Q Consensus        62 ~~~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~~~r~~la~l~g~~~~~~vv~~  139 (430)
                      |-.+-..+.+|+.+-.-+.+|..+.+.+.++++.|...+.    -+|.  ...|...=+.+-..++.+.|+..+ ||.++
T Consensus        60 sLv~~d~~~iYlcGNSLGLmPK~t~~~~~~eLDkWak~av----~gH~~GkvPW~~~De~il~l~~~iVGA~e~-Evavm  134 (465)
T KOG3846|consen   60 SLVSDDKPVIYLCGNSLGLMPKSTRNSINAELDKWAKCAV----EGHFKGKVPWVSIDEPILPLLAPIVGAQEN-EVAVM  134 (465)
T ss_pred             cccCCCCCeEEEeccccccCchhhHhHHHHHHHHHHhhhh----hcccccccceeecchhhhhhhhhhccCCch-hhhhH
Confidence            4344555567887777788999999999999999865443    1232  234555556778899999999876 88887


Q ss_pred             eCcHHHHHHHHHhhcCCCCC--cEEEEeCChh-HHH--HHHHHHHhC-Cc----eEEecCCCCcCCCCCCccc-cc-c--
Q 043610          140 QGGATTQFAAVPLNLCTPND--PVDYIVTGSW-GDK--AFKEAQKFC-NP----QVIWSGKAEKYTKIPNFDA-LE-Q--  205 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl~~~gd--~vl~~~~g~~-~~~--~~~~a~~~g-~~----~~v~~~~~~~~g~~~d~~~-l~-i--  205 (430)
                       ++-|-.++.++.++.+|-.  .-+.++...| ++.  .....+..| .+    +.+...+.   .+.+-.++ |+ |  
T Consensus       135 -NsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREG---EetlRteDILd~IEk  210 (465)
T KOG3846|consen  135 -NSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREG---EETLRTEDILDTIEK  210 (465)
T ss_pred             -hhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccccc---ccchhHHHHHHHHHh
Confidence             6888889999999987632  2233454443 222  122334445 22    12222221   11222233 22 2  


Q ss_pred             -CCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc--cCCccEEEEE
Q 043610          206 -NPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV--GPSGVTIVIV  277 (430)
Q Consensus       206 -~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~--gp~G~g~l~v  277 (430)
                       .+...+|+++.++..||..+|  .|... +.+|+++=.|-+|++|-.|+-+.+|  ||...+++|.+  |+-|+|.+++
T Consensus       211 ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFv  290 (465)
T KOG3846|consen  211 NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFV  290 (465)
T ss_pred             cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeee
Confidence             345789999999999999999  67776 5889999999999999999999998  58999999999  5888999999


Q ss_pred             cHHHHhccCCCCCccccccc----------hhh---cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          278 RKDLLGNAQDKTPLMLDYKI----------HDE---NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       278 ~~~~~~~~~~~~p~~~~~~~----------~~~---~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      .++......+..-.+++...          ...   -|.+...|++....++..+|+... +..++++++|..-|..++.
T Consensus       291 Hekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~-q~~~~~lRkrS~lLTgYle  369 (465)
T KOG3846|consen  291 HEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFA-QFNINELRKRSLLLTGYLE  369 (465)
T ss_pred             ehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHH-HhhHHHHhhhhhhHHhHHH
Confidence            98887654332222221111          001   133445788889999999999665 5579999999999999999


Q ss_pred             HHHHccCCce-----------ecC-CCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecC-CCC
Q 043610          345 NVIDGSNGFY-----------KCP-VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYN-AMP  411 (430)
Q Consensus       345 ~~l~~~~G~~-----------~~~-~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~-~~t  411 (430)
                      ..++...|..           ++. ..-..|. ..+++.+.. . .+++.+.|.++|+++-.  |..+.||+.+.. ||+
T Consensus       370 yL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erG-cQLsl~Fss-p-~~~vfqeL~krGv~~Dk--R~PNvIRvAPvpLYN~  444 (465)
T KOG3846|consen  370 YLLKASKGYKHPLRTEKLFFTIITPTSTDERG-CQLSLYFSS-P-TPKVFQELHKRGVIGDK--RRPNVIRVAPVPLYNT  444 (465)
T ss_pred             HHHHHhcccCchhhhcceeEEEeCCccccccc-ceEEEEeCC-C-chHHHHHHHHcCeeccc--cCCCceEeecchhhcc
Confidence            8888655543           221 1223343 234444432 1 23688999999998643  556789999776 999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 043610          412 LAGVEKLVAFMKDFQA  427 (430)
Q Consensus       412 ~edv~~ll~~L~~~~~  427 (430)
                      ..||.+++.+|.+++.
T Consensus       445 f~Dvy~f~n~L~e~~d  460 (465)
T KOG3846|consen  445 FSDVYIFVNALNEAMD  460 (465)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998865

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.74  E-value=9.7e-17  Score=160.65  Aligned_cols=275  Identities=16%  Similarity=0.106  Sum_probs=176.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   ..+++ +||++|+..++.+++++||+|++....+.+..  +...++..| ++..++.   
T Consensus        40 p~~~~le~~la~l~g~~---~a~~~-~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~---  112 (369)
T cd00614          40 PTVDALEKKLAALEGGE---AALAF-SSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP---  112 (369)
T ss_pred             hhHHHHHHHHHHHHCCC---CEEEE-cCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC---
Confidence            34568889999999975   34554 67899999999999999999987665554432  122344556 5554432   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~  264 (430)
                            .|+++++  +++++++|++.++.|++|.+.|  +|.++ +++|+++++|++++.+..  ++++ ..|+++.|++
T Consensus       113 ------~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~~~~~-g~Divv~S~t  185 (369)
T cd00614         113 ------DDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQRPLEL-GADIVVHSAT  185 (369)
T ss_pred             ------CCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCChhhh-CCcEEEeccc
Confidence                  2356665  6778999999999999999999  78886 789999999999887754  3332 2489999999


Q ss_pred             ccccCCc---cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          265 KNVGPSG---VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       265 K~~gp~G---~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      |++|..|   .|+++.++ ++++.+....          .  ...++.+....+.+..+|+      .+....++..+.+
T Consensus       186 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~----------~--~~g~~~~p~~a~~~l~~l~------tl~~r~~~~~~na  247 (369)
T cd00614         186 KYIGGHSDVIAGVVVGSGEALIQRLRFLR----------L--ALGTILSPFDAWLLLRGLK------TLPLRMERHSENA  247 (369)
T ss_pred             eeccCCCCceEEEEEeCcHHHHHHHHHHH----------H--hhCCCCCHHHHHHHHcCCC------CHHHHHHHHHHHH
Confidence            9996444   68888877 6666543210          0  0112344443333333332      3566778888889


Q ss_pred             HHHHHHHHccCCceec--CC---CCC--------CCccceEEEEcCCCchhH--HHHHHHHHcCCe---------e-cC-
Q 043610          341 ELLYNVIDGSNGFYKC--PV---EKS--------VRSFMNVPFTLEKSDLEA--EFVKEAAKEKMV---------Q-LK-  394 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~~--~~---~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~~~Gi~---------~-~~-  394 (430)
                      .++.++|.+..++..+  |.   .+.        .....+++|.+++ +.+.  +|++.|+--.+.         + .+ 
T Consensus       248 ~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~  326 (369)
T cd00614         248 LKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-GLEAAKKFLNALKLFSLAVSLGGVESLVEHPA  326 (369)
T ss_pred             HHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-CHHHHHHHHHcCCcceEcccCCCCceeeeCCc
Confidence            9999999875444321  21   110        1134678899863 2121  344444321111         0 01 


Q ss_pred             --CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          395 --GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       395 --g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                        .+.            ..+-||+|++.    ||++.|++-|+..+
T Consensus       327 ~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al  368 (369)
T cd00614         327 SMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL  368 (369)
T ss_pred             ccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence              110            12469999996    78888888877654

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.74  E-value=1.5e-16  Score=161.69  Aligned_cols=149  Identities=15%  Similarity=0.064  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.++++.|.+.   .+++ +||+.|+..++.+++++||+|++....+.+.  .+...+++.| +++.++.     
T Consensus        66 ~~~Le~~lA~leg~~~---al~~-~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~-----  136 (431)
T PRK08248         66 TDVFEKRIAALEGGIG---ALAV-SSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP-----  136 (431)
T ss_pred             HHHHHHHHHHHhCCCc---EEEE-CCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC-----
Confidence            4578899999999753   4554 7899999999999999999999876554332  2334456677 6665543     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCccc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNV  267 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~  267 (430)
                          .|+++++  +++++++|++++++||||.+.|  +|.++ +++|+++++|++++.+....+++ ..|+++.|+|||+
T Consensus       137 ----~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~l  212 (431)
T PRK08248        137 ----SDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFI  212 (431)
T ss_pred             ----CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCcccc
Confidence                2556666  6789999999999999999999  78886 78899999999987544332332 2489999999999


Q ss_pred             cCCc--cEEEEEc
Q 043610          268 GPSG--VTIVIVR  278 (430)
Q Consensus       268 gp~G--~g~l~v~  278 (430)
                      |++|  +|.+++.
T Consensus       213 gg~g~~~Gg~v~~  225 (431)
T PRK08248        213 GGHGTSIGGVIVD  225 (431)
T ss_pred             CCCCCceEEEEEe
Confidence            8667  7777774

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.74  E-value=2.9e-16  Score=159.81  Aligned_cols=306  Identities=17%  Similarity=0.063  Sum_probs=208.4

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .++.+....++..+++.+.+.+...+..-  .+     -...++....+-+++-..+++++|.+.+..-.| |+|+|+++
T Consensus        61 ~p~~~~~~~~~~~~~~~a~~~~~~~~~~n--l~-----d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~-t~GgTean  132 (460)
T COG0076          61 HPRANLAGFCPTRVPPVAAELLVSALNKN--LG-----DPDESPAAAELEERVVNMLSDLLGAPEEASGTF-TSGGTEAN  132 (460)
T ss_pred             CcceEEEccCCCCCHHHHHHHHHHHHhhc--CC-----CcccChhHHHHHHHHHHHHHHHhCCCCCCceEE-EcChHHHH
Confidence            56667788888888888888888877531  11     123456777888899999999999975434455 57899999


Q ss_pred             HHHHhhc---CC--CC--------C-cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCcc
Q 043610          148 AAVPLNL---CT--PN--------D-PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAK  210 (430)
Q Consensus       148 ~~~~~sl---~~--~g--------d-~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~  210 (430)
                      ...+...   ..  .+        . +|++....||+  |.+.+.-+| +.+.++..+.   ...+|+++++  +++++.
T Consensus       133 ~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s--~~Kaa~~lG~~~~~v~~~~~---~~~id~~~l~~~i~~~t~  207 (460)
T COG0076         133 LLALLAARERWRKRALAESGKPGGKPNIVCSETAHFS--FEKAARYLGLGLRRVPTVPT---DYRIDVDALEEAIDENTI  207 (460)
T ss_pred             HHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhH--HHHHHHHhCCCceeEEeccC---ccccCHHHHHHHHHhhcc
Confidence            8655442   11  11        1 45555556776  445566678 8888877542   2357888887  677766


Q ss_pred             E--EEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc---------ccccccEEEeCCCcccc-CCccEEE
Q 043610          211 Y--LHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV---------DVTRFGVIYAGAQKNVG-PSGVTIV  275 (430)
Q Consensus       211 l--v~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i---------dl~~~d~~~~s~~K~~g-p~G~g~l  275 (430)
                      .  |+.+...|.+|.+-|  +|+++ ++++++++||++.+....|+         .++..|.++.++|||+. |.|+|++
T Consensus       208 ~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~i  287 (460)
T COG0076         208 GGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVV  287 (460)
T ss_pred             CceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEE
Confidence            5  888889999999999  89997 68999999999887555542         23334689999999995 9999999


Q ss_pred             EEcHH-HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCce
Q 043610          276 IVRKD-LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY  354 (430)
Q Consensus       276 ~v~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~  354 (430)
                      +++++ .+.+.....+.|+... ...+....+|.+.....++-..|+.+- .+|+.++.+++.++++++.+.|++...++
T Consensus       288 l~rd~e~l~~~~~~~~~yl~~~-~~~~~ti~~sr~~~~~~~~~~~l~~lG-~eGy~~l~~~~~~~a~~la~~l~~~~~~e  365 (460)
T COG0076         288 LFRDEEALRRILIFADYYLPGG-GIPNFTILGSRPGRQALALYANLRRLG-REGYRKLLDRTLELARYLAEELEKLGDFE  365 (460)
T ss_pred             EEECHHHhhhhhhcccccCCCC-CcCceeEeeccchHHHHHHHHHHHHhC-HhHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence            99876 4443221122232210 111112235666656666667777664 35899999999999999999999854488


Q ss_pred             ecCCCCCCCccceEEEEcCCCch-hHHHHHHHHHcCCee
Q 043610          355 KCPVEKSVRSFMNVPFTLEKSDL-EAEFVKEAAKEKMVQ  392 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~~~~-~~~~~~~L~~~Gi~~  392 (430)
                      ++. ++  .. .+|+|++++... ..+....+++.|..+
T Consensus       366 ~~~-~p--~l-~~V~fr~~~~~~~~~~~~~~~~~~gw~v  400 (460)
T COG0076         366 LVN-EP--EL-PIVAFRLKDDEDTLADLSERLDRRGWQV  400 (460)
T ss_pred             eec-CC--cc-ceEEEEcCCcccchhchHHHHHhcCcee
Confidence            863 33  34 378999865221 224555666666654

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.74  E-value=3.9e-16  Score=157.84  Aligned_cols=208  Identities=12%  Similarity=0.035  Sum_probs=139.8

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH--HHH-HHHHHhC-CceEEecCCCC
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD--KAF-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~--~~~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      .+++++.+++++|++.   .+++ +||+.|+..++.++++|||+|++..+. |+.  .+. ..++..| +++.++.    
T Consensus        67 ~~~le~~lA~l~g~~~---~i~~-~sG~~Al~~~l~~ll~~Gd~Viv~~~~-y~~t~~~~~~~~~~~G~~v~~vd~----  137 (403)
T PRK07503         67 LALLEQRMASLEGGEA---AVAL-ASGMGAITATLWTLLRPGDEVIVDQTL-YGCTFAFLHHGLGEFGVTVRHVDL----  137 (403)
T ss_pred             HHHHHHHHHHHhCCCc---EEEE-cCHHHHHHHHHHHHcCCCCEEEEccCc-cchHHHHHHHHHhhCCEEEEEeCC----
Confidence            5688899999999864   3444 678999999998888999999876543 332  122 2344567 5555543    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKN  266 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~  266 (430)
                           .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+.....+. ..|+++.|++|+
T Consensus       138 -----~d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~  212 (403)
T PRK07503        138 -----TDPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKY  212 (403)
T ss_pred             -----CCHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEcccccc
Confidence                 2556676  6789999999999999999999  78886 68999999999998654322222 237999999999


Q ss_pred             ccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610          267 VGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       267 ~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l  343 (430)
                      +|..|   .|+++.+++++++++..     .+.     ......++....+.+...|+      -++.+.++..+.+..+
T Consensus       213 l~g~gd~~gG~v~~~~~l~~~l~~~-----~~~-----~~~g~~~s~~~a~l~l~~L~------tl~~r~~~~~~na~~~  276 (403)
T PRK07503        213 LGGHGDITAGLVVGGKALADRIRLE-----GLK-----DMTGAVMSPFDAFLLMRGLK------TLALRMDRHCASAQAV  276 (403)
T ss_pred             ccCCCceeEEEEEcCHHHHHHHHhh-----hHH-----hCcCCCCCHHHHHHHHcCcc------hHHHHHHHHHHHHHHH
Confidence            97555   68888888877664310     000     01112334333333333333      2345556666778888


Q ss_pred             HHHHHccCCce
Q 043610          344 YNVIDGSNGFY  354 (430)
Q Consensus       344 ~~~l~~~~G~~  354 (430)
                      .++|.+.+.+.
T Consensus       277 a~~L~~~p~v~  287 (403)
T PRK07503        277 AEWLARHPAVE  287 (403)
T ss_pred             HHHHHhCCCcc
Confidence            88888754443

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.73  E-value=1.6e-16  Score=159.90  Aligned_cols=275  Identities=15%  Similarity=0.067  Sum_probs=170.1

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-H-HHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-A-FKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~-~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.+++++|.+.  .++ + +|+++|+.+++.+++++||+|++..+.+.+.. . ....++.| ++..++      
T Consensus        63 ~~~Le~~lA~~~g~~~--~i~-~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d------  132 (388)
T PRK07811         63 RTALEEQLAALEGGAY--GRA-F-SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVD------  132 (388)
T ss_pred             HHHHHHHHHHHhCCCc--eEE-e-CCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeC------
Confidence            5588899999999975  344 3 56799999999999999999987665544322 1 11122234 333222      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCccc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNV  267 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~  267 (430)
                         ..|+++++  +++++|+|++++++|++|.+.|  +|.++ +++|+++++|++++.+.....+. ..|++++|++|++
T Consensus       133 ---~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l  209 (388)
T PRK07811        133 ---LSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYI  209 (388)
T ss_pred             ---CCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCchhhCCcEEEecCceee
Confidence               24667776  6889999999999999999999  78886 68999999999988775422222 3489999999999


Q ss_pred             c-CCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610          268 G-PSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       268 g-p~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l  343 (430)
                      + +.+  .|+++++ +++.+.+..    +.       . ....+.+....+   .+++-+.   -+..+.++..+.+..+
T Consensus       210 ~g~~~~~gG~vv~~~~~l~~~~~~----~~-------~-~~g~~~s~~~a~---l~~~~L~---tl~~R~~~~~~na~~l  271 (388)
T PRK07811        210 GGHSDVVGGALVTNDEELDEAFAF----LQ-------N-GAGAVPGPFDAY---LTLRGLK---TLAVRMDRHSENAEAV  271 (388)
T ss_pred             cCCCCcEEEEEEECCHHHHHHHHH----HH-------H-hcCCCCCHHHHH---HHHhccC---cHHHHHHHHHHHHHHH
Confidence            6 543  4878876 444443311    00       0 011122222222   2222222   3566677778888899


Q ss_pred             HHHHHccCCceec--CCCCCC-----------CccceEEEEcCCCchhH--HHHHHHHHcCCe----------ecC---C
Q 043610          344 YNVIDGSNGFYKC--PVEKSV-----------RSFMNVPFTLEKSDLEA--EFVKEAAKEKMV----------QLK---G  395 (430)
Q Consensus       344 ~~~l~~~~G~~~~--~~~~~~-----------rs~~iv~f~~~~~~~~~--~~~~~L~~~Gi~----------~~~---g  395 (430)
                      .++|++.+++..+  |.-+++           ...++++|.+++ +.+.  +|++.|+--.+.          ..+   .
T Consensus       272 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~  350 (388)
T PRK07811        272 AEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG-GEEAARDFCARTKVFTLAESLGGVESLIEHPSAMT  350 (388)
T ss_pred             HHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC-CHHHHHHHHHhCCcceeeccCCCCcceEeCCcccC
Confidence            9999876655422  211110           134689999974 2222  455555321111          001   1


Q ss_pred             CC---------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          396 HR---------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       396 ~~---------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +.         ..+-||+|++.    ||.+.+++-|+..+.
T Consensus       351 ~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~  387 (388)
T PRK07811        351 HASTAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG  387 (388)
T ss_pred             cccCCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence            11         13469999996    566666666665543

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.73  E-value=1.4e-15  Score=153.90  Aligned_cols=325  Identities=12%  Similarity=0.014  Sum_probs=199.9

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCC-CcEEEEEe
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQ-EYSVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~-~~~vv~~~  140 (430)
                      ..++.+.|..|-     +.-+|.+.+++.+.+.+... ...     .+..   ....++.+.|+++++.+. + +++++ 
T Consensus        41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~-~~~-----~~~~---~~~~~la~~l~~~~~~~~~~-~v~~~-  109 (398)
T PRK03244         41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGH-VSN-----LFAT---EPQIALAERLVELLGAPEGG-RVFFC-  109 (398)
T ss_pred             CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccC-ccC-----ccCC---HHHHHHHHHHHHhCCCCCCC-EEEEe-
Confidence            344556665431     22378999999998875321 111     1111   122477888889888642 3 67765 


Q ss_pred             CcHHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHH-hC-CceEEecCC-CCcCCCC--CCccccc--cCCCccEE
Q 043610          141 GGATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQK-FC-NPQVIWSGK-AEKYTKI--PNFDALE--QNPDAKYL  212 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~-~g-~~~~v~~~~-~~~~g~~--~d~~~l~--i~~~~~lv  212 (430)
                      +|+++|+..++.....+| ++++.++.++.+....  +.. .| ......... ..+....  .|+++++  +.+++++|
T Consensus       110 ~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~av  187 (398)
T PRK03244        110 NSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMG--ALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAV  187 (398)
T ss_pred             CchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHH--HHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEE
Confidence            789999999887654455 4555555555443211  111 12 111000000 0000001  2556676  56789999


Q ss_pred             EEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC--Ccc--ccccc--cEEEeCCCccccC-CccEEEEE
Q 043610          213 HICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS--KPV--DVTRF--GVIYAGAQKNVGP-SGVTIVIV  277 (430)
Q Consensus       213 ~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~--~~i--dl~~~--d~~~~s~~K~~gp-~G~g~l~v  277 (430)
                      ++..+.+++|.+.|      +|.++ +++|+++++|++++ +|-  ..+  ....+  |++  +++|++|+ ..+|++++
T Consensus       188 iiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~--t~sK~l~~G~~ig~~~~  265 (398)
T PRK03244        188 FLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV--TLAKGLGGGLPIGACLA  265 (398)
T ss_pred             EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEE--EEchhhhCCcccEEEEE
Confidence            99999999999998      24443 58999999999975 331  111  22222  554  55799972 22899999


Q ss_pred             cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecC
Q 043610          278 RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP  357 (430)
Q Consensus       278 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~  357 (430)
                      ++++++.+.+.   .        ...+ +..|...+.++.++|+.+.+    ++..++.+++.+++++.|++ .++..+.
T Consensus       266 ~~~~~~~~~~~---~--------~~~t-~~~~~~~~aaa~a~l~~~~~----~~~~~~~~~~~~~l~~~L~~-~~~~~~~  328 (398)
T PRK03244        266 FGPAADLLTPG---L--------HGST-FGGNPVACAAALAVLDTIAS----EGLLENAERLGEQLRAGIEA-LGHPLVD  328 (398)
T ss_pred             cHHHHhhccCC---C--------CcCC-CCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHh-cCCCcee
Confidence            99887654321   0        0112 23456677888888886653    35678888889999999986 4442221


Q ss_pred             CCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          358 VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       358 ~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       .-..+. .++.+.++. ....++.++|.++||.+.+..  .+.||++++..++++||+++++.|++++++
T Consensus       329 -~v~g~g-~~~~i~~~~-~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~  394 (398)
T PRK03244        329 -HVRGRG-LLLGIVLTA-PVAKAVEAAAREAGFLVNAVA--PDVIRLAPPLIITDAQVDAFVAALPAILDA  394 (398)
T ss_pred             -eEeecc-EEEEEEEec-cHHHHHHHHHHHCCeEEeecC--CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence             111123 345566653 223368889999999986521  257999999889999999999999998864

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.73  E-value=1.6e-15  Score=155.59  Aligned_cols=330  Identities=15%  Similarity=0.124  Sum_probs=214.5

Q ss_pred             CCceeecCCCC---CCcHHHHHHHH-HHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCc
Q 043610           69 DRVFNFAAGPA---NLPEKVLLKAQ-SELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGG  142 (430)
Q Consensus        69 ~~~~l~~~gp~---~~~~~V~~a~~-~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~g  142 (430)
                      +..+.|..|-.   ..|....+... ..+.+......   ........+..+.+.+.+.++.-.|.  .++ +|++ |+|
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~---~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~-~Iii-T~G  163 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLA---LQYGPTAGLPELREAIAAYLLARRGISCEPE-QIVI-TSG  163 (459)
T ss_pred             CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhh---hcCCCCCCcHHHHHHHHHHHHHhcCCccCcC-eEEE-eCC
Confidence            66777877642   23544444333 33322111101   01111234555555666666655565  344 6776 488


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEEEEe-ec
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHIC-AN  217 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~-~~  217 (430)
                      +++|++++...+++|||.|++=+++|++.  ....+.+| ++..|+.++   .|  +|+++++  + +.++|+++++ ..
T Consensus       164 ~q~al~l~~~~l~~pGd~v~vE~PtY~~~--~~~~~~~g~~~~~vp~d~---~G--~~~e~le~~~~~~~~k~~y~~P~~  236 (459)
T COG1167         164 AQQALDLLLRLLLDPGDTVLVEDPTYPGA--LQALEALGARVIPVPVDE---DG--IDPEALEEALAQWKPKAVYVTPTF  236 (459)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEcCCCcHHH--HHHHHHcCCcEEecCCCC---CC--CCHHHHHHHHhhcCCcEEEECCCC
Confidence            99999999999999999999766677664  45677788 888888753   34  7889888  2 3367877664 56


Q ss_pred             CCCccccCC-----CCccc-cCCCcEEEEeccCcCCC---Ccc-cccccc-----EEEeCCCccccC-CccEEEEEcHHH
Q 043610          218 ETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS---KPV-DVTRFG-----VIYAGAQKNVGP-SGVTIVIVRKDL  281 (430)
Q Consensus       218 ~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~---~~i-dl~~~d-----~~~~s~~K~~gp-~G~g~l~v~~~~  281 (430)
                      +||||..++     +|.++ +++|+++|=|.+++.-.   .|. .+..+|     ++++|++|.+.| -.+||+++++++
T Consensus       237 qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~  316 (459)
T COG1167         237 QNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPEL  316 (459)
T ss_pred             CCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHH
Confidence            999999999     35554 59999999999865322   222 244443     788999999986 339999999998


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH--HHHhcCHHHHHHHHHHHHHHHHHHHHccCC-ceecCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY--LLELGGLNEVEKMNRKKAELLYNVIDGSNG-FYKCPV  358 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~--l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-~~~~~~  358 (430)
                      ++.+..       .+.     ....+++...+.++..-+..  ..  ..+..+++.+++.++.+.++|.+..+ ...+. 
T Consensus       317 ~~~~~~-------~k~-----~~~~~~s~~~Q~~la~~l~~G~~~--~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~-  381 (459)
T COG1167         317 IEKLLR-------LKQ-----AADLGPSSLSQAALAAFLLSGHYD--RHLRRLRREYARRRDALLEALAEYLPELATWT-  381 (459)
T ss_pred             HHHHHH-------HHH-----HhcCCCChHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHHHHHHHHHHHhCCCCeeee-
Confidence            776321       100     11124455555555544431  11  13677888888999999999998543 11111 


Q ss_pred             CCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecC-CCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          359 EKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLK-GHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~-g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .+  .+.+.+.+.+++. .+. ++.+++.++|+.+.+ |..      ..+++|+|+.. .+++++++.+..|.+.++++
T Consensus       382 ~p--~gG~flwl~l~~~-~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~  456 (459)
T COG1167         382 RP--EGGLFLWLELPEG-IDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREA  456 (459)
T ss_pred             cC--CceEEEEEEcCCC-CCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Confidence            11  2335567788863 344 799999999999877 542      13379999985 55899999999988887654

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.73  E-value=1.1e-15  Score=154.44  Aligned_cols=319  Identities=12%  Similarity=0.068  Sum_probs=194.7

Q ss_pred             CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-.     --.|.|.+++.+.+.+....  +. ...      .....++.+.|+++.+.  + .++++ +|
T Consensus        39 G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~--~~-~~~------~~~~~~l~~~l~~~~~~--~-~~~~~-~S  105 (396)
T PRK04073         39 GNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLT--SR-AFH------SDQLGPWYEKVAKLTGK--D-MVLPM-NT  105 (396)
T ss_pred             CCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccc--cc-ccC------CHHHHHHHHHHHhcCCC--C-eEEEc-CC
Confidence            344445555432     25789999999988653211  00 011      12334667777777764  2 67765 78


Q ss_pred             HHHHHHHHHhhcC---------CCC-CcEEEEeCChhHHHHHHHHHHh-CCceE----EecCCCCcCCCCCCccccc--c
Q 043610          143 ATTQFAAVPLNLC---------TPN-DPVDYIVTGSWGDKAFKEAQKF-CNPQV----IWSGKAEKYTKIPNFDALE--Q  205 (430)
Q Consensus       143 aT~a~~~~~~sl~---------~~g-d~vl~~~~g~~~~~~~~~a~~~-g~~~~----v~~~~~~~~g~~~d~~~l~--i  205 (430)
                      |++|++.++....         ++| ++|+.+..++.|.-.  .+... +....    .+...+-..-...|+++++  +
T Consensus       106 GseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i  183 (396)
T PRK04073        106 GAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTM--AAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAI  183 (396)
T ss_pred             hHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCH--HHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhc
Confidence            9999998766531         134 567766655554311  11111 11100    0000000000012556665  6


Q ss_pred             CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC----ccccccc--cEEEeCCCccccCCc
Q 043610          206 NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK----PVDVTRF--GVIYAGAQKNVGPSG  271 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~----~idl~~~--d~~~~s~~K~~gp~G  271 (430)
                      ++++++|++..+++++|.+.|      +|.++ +++|+++++|++|+ +|..    .++....  |+++  ++|.+|..|
T Consensus       184 ~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~--~sK~lg~gg  261 (396)
T PRK04073        184 TPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYI--LGKALGGGV  261 (396)
T ss_pred             ccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEE--ecccccCCC
Confidence            778999999999999999988      24443 58999999999987 5421    1122222  5554  479997544


Q ss_pred             --cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          272 --VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       272 --~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                        +|++..++++++.+.+..           ...+ .+.|...++++.++|+.+.+    +.+.++.+++++++++.|++
T Consensus       262 ~~ig~~~~~~~i~~~~~~~~-----------~~~t-~~~~~~~~aaa~aaL~~~~~----~~l~~~~~~~~~~l~~~L~~  325 (396)
T PRK04073        262 FPISCVAANRDILGVFTPGS-----------HGST-FGGNPLACAVSIAALEVLEE----EKLPERSLELGEYFKEQLKE  325 (396)
T ss_pred             CcceEEEEcHHHHhhhcCCC-----------CCCC-CCCCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHh
Confidence              899999999877643210           0112 23466777888889987753    24567778889999999986


Q ss_pred             cCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       .+...+. +...+.. .+.+.++.  ...++.++|.++||.+.+..  .+.|||++..+++++|+++++++|++++
T Consensus       326 -l~~~~i~-~~~~~g~-~~~~~~~~--~~~~~~~~l~~~Gv~~~~~~--~~~iRi~p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        326 -IDNPMIK-EVRGRGL-FIGVELNE--PARPYCEALKEEGLLCKETH--ETVIRFAPPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             -hcCCccc-ceecceE-EEEEEecc--hHHHHHHHHHHCCeEEecCC--CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence             3332221 1111222 24455542  23478889999999986421  2579999988999999999999999875

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.73  E-value=3.3e-16  Score=159.22  Aligned_cols=289  Identities=11%  Similarity=0.067  Sum_probs=177.4

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+.+++.++++.|++.  . +++ +|+++|+.+++.+++++||+|++....+.+.  .+.+..++.| ++++++. . 
T Consensus        69 pt~~~le~~la~l~g~~~--~-v~f-sSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~-  142 (437)
T PRK05613         69 PTVEALENRIASLEGGVH--A-VAF-ASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN-P-  142 (437)
T ss_pred             hHHHHHHHHHHHHhCCCe--E-EEe-CCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC-C-
Confidence            446688999999999852  4 444 4678999998999889999998765444443  2334556778 7766651 1 


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~  264 (430)
                            .|+++++  ++++|++|++.++.|++|.+.|  +|+++ +++|+++++|++++.|..  ++++ ..|++++|+|
T Consensus       143 ------~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~-GaDivv~S~~  215 (437)
T PRK05613        143 ------DDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLEL-GADVVVASLT  215 (437)
T ss_pred             ------CCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccccChHHh-CCCEEEeecc
Confidence                  2566776  7899999999899999999999  78886 789999999999988754  3322 2389999999


Q ss_pred             ccccCCc--cEEEEE-cHHHH-hc------cCCC--CCc-------cccccc-------hh-hcCCCCCCccHHHHHHHH
Q 043610          265 KNVGPSG--VTIVIV-RKDLL-GN------AQDK--TPL-------MLDYKI-------HD-ENNSLYNTPPCYCIYMCG  317 (430)
Q Consensus       265 K~~gp~G--~g~l~v-~~~~~-~~------~~~~--~p~-------~~~~~~-------~~-~~~~~~~T~~~~~~~a~~  317 (430)
                      |++|+.|  +|.+++ +++.. ..      +.+.  .|.       ..++..       .. ......++.+....+.+.
T Consensus       216 K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~  295 (437)
T PRK05613        216 KFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTA  295 (437)
T ss_pred             ceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence            9998655  566666 33211 00      0000  000       000000       00 000122344444444333


Q ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CC--C-CC---------CCccceEEEEcCCCchhH--HH
Q 043610          318 LVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PV--E-KS---------VRSFMNVPFTLEKSDLEA--EF  381 (430)
Q Consensus       318 ~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~--~-~~---------~rs~~iv~f~~~~~~~~~--~~  381 (430)
                      ..|+      -+..+.+++.+.+..+.++|++.+.+..+  |.  + +.         .....+++|.+++ +.+.  +|
T Consensus       296 rgl~------TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~f  368 (437)
T PRK05613        296 QGLD------TLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKG-GKDEAWAF  368 (437)
T ss_pred             cccC------cHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecC-CHHHHHHH
Confidence            3332      35677788888889999999976554321  21  1 10         1124589999964 2222  46


Q ss_pred             HHHHHHcCCee----------cC---CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          382 VKEAAKEKMVQ----------LK---GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       382 ~~~L~~~Gi~~----------~~---g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ++.|+--.+..          .+   .+.            ..+-||+|++.    ||++.+++-|+..++
T Consensus       369 ~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~dLi~Dl~~Al~  435 (437)
T PRK05613        369 IDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI----EDIDDIIADLEGGFA  435 (437)
T ss_pred             HHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence            66554211110          01   110            13469999996    667777777766654

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.72  E-value=3.2e-16  Score=155.48  Aligned_cols=331  Identities=17%  Similarity=0.191  Sum_probs=193.4

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHH-HHHHHHHHHHHHhCCCCC-cEEEEEeCcHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKS-IIEKAESDLRALLNIPQE-YSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~r~~la~l~g~~~~-~~vv~~~~gaT~  145 (430)
                      +.+.+++.|....+++.|++++...+.+-...|... ...+.+.++.+ +.+-+.+.++++||+.++ ..+-+-.-|++.
T Consensus        19 q~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg-~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~   97 (399)
T PF00464_consen   19 QRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPG-KRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQ   97 (399)
T ss_dssp             HHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETT-EESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHH
T ss_pred             HhcCccccCcccccCHHHHHHhCCcceeeccccCCC-cccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchH
Confidence            445788889998899999999988876533333211 13334455544 444568888999999743 223444568999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCC---hhHHHHHHHH------HHhCCceEEecCCCCcCCCCCCccccc-c--CCCccEEE
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTG---SWGDKAFKEA------QKFCNPQVIWSGKAEKYTKIPNFDALE-Q--NPDAKYLH  213 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g---~~~~~~~~~a------~~~g~~~~v~~~~~~~~g~~~d~~~l~-i--~~~~~lv~  213 (430)
                      |+.+++.++++|||+|+.+...   |.++......      -++-+...++++++  . ..+|.|+++ +  ..++|+|+
T Consensus        98 An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~--~-~~ID~d~l~~~a~~~kPklIi  174 (399)
T PF00464_consen   98 ANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD--T-GLIDYDELEKLAKEHKPKLII  174 (399)
T ss_dssp             HHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT--T-SSB-HHHHHHHHHHH--SEEE
T ss_pred             HHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC--C-CeECHHHHHHHHhhcCCCEEE
Confidence            9999999999999999988744   3333221111      11113444455431  3 368998887 2  45789888


Q ss_pred             EeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC-----CCccccccccEEEeCCCccc-cCCccEEEEEc------
Q 043610          214 ICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC-----SKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVR------  278 (430)
Q Consensus       214 i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G-----~~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~------  278 (430)
                      +.....  -..+|  ++.++ .+.|+++++|++|-.|     ..|-.+...|++++|.||.| ||.| |+++.+      
T Consensus       175 ~G~S~y--~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrg-giI~~~~~~~~~  251 (399)
T PF00464_consen  175 CGASSY--PRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRG-GIILTNKGSKNV  251 (399)
T ss_dssp             EE-SST--SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS--EEEEES-SEEEE
T ss_pred             ECchhc--cCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCc-eEEEEcCCcccc
Confidence            875332  33344  56666 5789999999999654     34444555799999999999 8999 999888      


Q ss_pred             --------HHHHhccCC-CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          279 --------KDLLGNAQD-KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       279 --------~~~~~~~~~-~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                              +++.++++. ..|            ...+.|-...+.++..+|.+..+. .+.+-.++..+.++.|.+.|.+
T Consensus       252 ~~~~~~~~~~l~~~I~~avfP------------~~qg~~h~~~iaalAval~ea~~~-~fk~Ya~qVv~NAk~La~~L~~  318 (399)
T PF00464_consen  252 DKKGKEIDEELAEKIDSAVFP------------GLQGGPHMHRIAALAVALKEALSP-EFKEYAKQVVKNAKALAEALQE  318 (399)
T ss_dssp             -TTS-EEEHHHHHHHHHHHTT------------TT-SS--HHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccHHHHHHHhccccCC------------CcccCcchhHHHHHHHHHhcccCH-HHHHHHHHHHHHHHHHHHHHhh
Confidence                    444444321 011            122456666778888888765422 3567778888888999999997


Q ss_pred             cCCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCee----cCCCCC---CCeeEEeecC----CCCHHHHHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQ----LKGHRS---VGGMRASIYN----AMPLAGVEK  417 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~----~~g~~~---~g~iRis~~~----~~t~edv~~  417 (430)
                       .|+.++. . ...+ +.+.+.+...+.+. +..+.|.+.||.+    .|+..+   ..+|||+...    -..++|++.
T Consensus       319 -~G~~v~~-g-gTd~-H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~  394 (399)
T PF00464_consen  319 -RGFKVVT-G-GTDN-HQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKE  394 (399)
T ss_dssp             -TT-EEGG-G-S-SS-SEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHH
T ss_pred             -CCcEEEE-C-CCCC-CeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHH
Confidence             8999974 1 1223 45667775434454 5777889999985    333322   3479999654    346888888


Q ss_pred             HHHHH
Q 043610          418 LVAFM  422 (430)
Q Consensus       418 ll~~L  422 (430)
                      +.+.|
T Consensus       395 iA~~I  399 (399)
T PF00464_consen  395 IAELI  399 (399)
T ss_dssp             HHHHH
T ss_pred             HHhhC
Confidence            87654

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.72  E-value=4.3e-16  Score=156.48  Aligned_cols=273  Identities=14%  Similarity=0.102  Sum_probs=172.9

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-H-HHHHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-K-AFKEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~-~~~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+++++.+++++|++   .++++ +||++|+..++.+++++||+|++....+.+. . +...+++.| ++..++.    
T Consensus        55 ~~~~le~~la~l~g~~---~~~~~-~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~----  126 (380)
T TIGR01325        55 TVAAFEERIAALEGAE---RAVAT-ATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP----  126 (380)
T ss_pred             hHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC----
Confidence            3568889999999985   35554 7899999999998889999988754332221 1 223455667 6655543    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC--CCccccccccEEEeCCCc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC--SKPVDVTRFGVIYAGAQK  265 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G--~~~idl~~~d~~~~s~~K  265 (430)
                           .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+  ..++++ ..|+++.|++|
T Consensus       127 -----~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl~~-g~Divv~S~sK  200 (380)
T TIGR01325       127 -----TDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPLKL-GADVVVYSATK  200 (380)
T ss_pred             -----CCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhh-CCCEEEeeccc
Confidence                 2456665  6788999999999999999999  78886 7889999999998643  345443 24899999999


Q ss_pred             cccCCc--c-EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          266 NVGPSG--V-TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       266 ~~gp~G--~-g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      +++..|  + |+++.++++++.+...    .      .  ....+.+....+.+...++      .++.+.++..+.+..
T Consensus       201 ~l~g~g~~~gG~vv~~~~~~~~l~~~----~------~--~~g~~~~p~~a~~~l~~l~------tl~~r~~~~~~~a~~  262 (380)
T TIGR01325       201 HIDGQGRVMGGVIAGSEELMAEVAVY----L------R--HTGPAMSPFNAWVLLKGLE------TLSLRMQKQFDSALA  262 (380)
T ss_pred             eecCCCCeEEEEEEeCHHHHHHHHHH----H------H--hhCCCCCHHHHHHHHhccC------cHHHHHHHHHHHHHH
Confidence            997555  3 7777788876653210    0      0  0112333333333333333      345667777788888


Q ss_pred             HHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCCchhH-HHHHHHHHcCCe----------ecC---C
Q 043610          343 LYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMV----------QLK---G  395 (430)
Q Consensus       343 l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~----------~~~---g  395 (430)
                      +.+.|++.+++..  +|.   .+.        ....++++|.+++ .... +|++.|+--.+.          ..+   .
T Consensus       263 la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~-~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~  341 (380)
T TIGR01325       263 IAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD-RAAAWKVLDAVELVSITNNLGDAKSTITHPATTT  341 (380)
T ss_pred             HHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-HHHHHHHHHcCCcceEcccCCCCCeeeeCCCccC
Confidence            8888887544432  221   111        0124688999873 1111 466655321111          101   1


Q ss_pred             CC------------CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          396 HR------------SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       396 ~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +.            ..+-||+|++.    ||.+.+++-|++.
T Consensus       342 ~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~a  379 (380)
T TIGR01325       342 HGRMQPEERAAAGIGDGLVRLSVGL----EDVDDLIADLKRA  379 (380)
T ss_pred             cccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHhh
Confidence            11            13469999996    6777777666553

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.72  E-value=4.3e-16  Score=157.35  Aligned_cols=274  Identities=11%  Similarity=0.049  Sum_probs=177.1

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-H-HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-K-AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~-~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.++++.|.+   +++++ +||+.|+..++.+++++||+|++....+-+. . +...+++.| +++.++.     
T Consensus        72 ~~~le~~lA~l~g~~---~al~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~-----  142 (403)
T PRK07810         72 VSMFEERLRLIEGAE---ACFAT-ASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG-----  142 (403)
T ss_pred             HHHHHHHHHHHhCCC---cEEEE-CChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC-----
Confidence            458889999999976   34554 7899999999989999999998765322121 1 223455667 6665542     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                          .|+++++  +++++++|++.+++|++|.+.|  +|+++ +++|+++++|++++.+..  ++++ ..|+++.|++|+
T Consensus       143 ----~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~~~-gaDivv~S~tK~  217 (403)
T PRK07810        143 ----EDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGLPL-GADVVVYSGTKH  217 (403)
T ss_pred             ----CCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChhhc-CCcEEEccCCce
Confidence                3556676  6889999999999999999999  78886 789999999999987654  4433 248999999999


Q ss_pred             ccCCc---cEEEEEcHHHHhc-cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VGPSG---VTIVIVRKDLLGN-AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~gp~G---~g~l~v~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++..|   .|+++.+++.+.. ++.    +.      .  ....+++....+.+...|+      -++.+.++..+.+.+
T Consensus       218 l~g~g~~~gG~v~~~~~~~~~~l~~----~~------~--~~g~~~s~~~a~l~l~~L~------tl~~R~~~~~~~a~~  279 (403)
T PRK07810        218 IDGQGRVLGGAILGDREYIDGPVQK----LM------R--HTGPALSAFNAWVLLKGLE------TLALRVRHSNASALR  279 (403)
T ss_pred             ecCCcCceeEEEEeChHHHHHHHHH----HH------H--HhCCCCCHHHHHHHHhccC------cHHHHHHHHHHHHHH
Confidence            97666   4888888776542 211    00      0  0112445555554444444      356677777888888


Q ss_pred             HHHHHHccCCceec--CCCCCC-----------CccceEEEEcCCC---chhH--HHHHHHHHc----------CCeecC
Q 043610          343 LYNVIDGSNGFYKC--PVEKSV-----------RSFMNVPFTLEKS---DLEA--EFVKEAAKE----------KMVQLK  394 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~~~~~~-----------rs~~iv~f~~~~~---~~~~--~~~~~L~~~----------Gi~~~~  394 (430)
                      +.++|++.+++..+  |.-+++           ....+++|.+.+.   +.+.  +|++.|+--          .++..+
T Consensus       280 ~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p  359 (403)
T PRK07810        280 IAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHP  359 (403)
T ss_pred             HHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCC
Confidence            88899875554322  211111           2345788998641   1111  355544311          111112


Q ss_pred             C---CC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          395 G---HR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       395 g---~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .   ++            ..+-+|+|++.    ||++.+++-|+..+
T Consensus       360 ~~~~h~~~~~~~~~~~gi~~~lvR~svGl----E~~~dli~dl~~Al  402 (403)
T PRK07810        360 ATTTHRAMGPEGRAAIGLGDGVVRLSVGL----EDTDDLIADLDRAL  402 (403)
T ss_pred             CccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence            1   11            12369999996    77777777776643

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.71  E-value=6.3e-16  Score=157.12  Aligned_cols=252  Identities=15%  Similarity=0.084  Sum_probs=156.1

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+.+++.++++.|.+.   .+++ +||+.|+.+++.+++++||+|++....+.+.. +. ..+++.| +++.+. .   
T Consensus        70 ~~~~Le~~lA~l~g~~~---av~~-sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d---  141 (436)
T PRK07812         70 TQDVVEQRIAALEGGVA---ALLL-ASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D---  141 (436)
T ss_pred             hHHHHHHHHHHHhCCCe---EEEE-ccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C---
Confidence            35588899999999863   4554 68899999999999999999987665443322 22 2234456 555443 1   


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKN  266 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~  266 (430)
                          ..|+++++  +++++++|++.++.|++|.+.|  +|.++ +++|++++||++++.+.....++ ..|+++.|+|||
T Consensus       142 ----~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~  217 (436)
T PRK07812        142 ----PDDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKY  217 (436)
T ss_pred             ----CCCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccc
Confidence                12566666  7899999999999999999999  78886 78999999999998765433332 248999999999


Q ss_pred             ccCCc--cEEEEEcHHHHhccCC-------CCCccccc------------cchhh-cCCCCCCccHHHHHHHHHHHHHHH
Q 043610          267 VGPSG--VTIVIVRKDLLGNAQD-------KTPLMLDY------------KIHDE-NNSLYNTPPCYCIYMCGLVFEYLL  324 (430)
Q Consensus       267 ~gp~G--~g~l~v~~~~~~~~~~-------~~p~~~~~------------~~~~~-~~~~~~T~~~~~~~a~~~al~~l~  324 (430)
                      +|+.|  +|.+++..+.......       ..|.+.+.            +.... .......++....+.+   ++-+ 
T Consensus       218 lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~---~rgl-  293 (436)
T PRK07812        218 LGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLI---AQGL-  293 (436)
T ss_pred             cCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHH---hcCc-
Confidence            98666  6777774332111000       01111110            00000 0011123333333322   2222 


Q ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CC--C-CC---------CCccceEEEEcCCCchhH--HHHHHHH
Q 043610          325 ELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PV--E-KS---------VRSFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       325 ~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~--~-~~---------~rs~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                        .-+..+.++..+.+..+.++|++.+++..+  |.  + +.         ....++++|.+.+ +.+.  +|++.|+
T Consensus       294 --~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~f~~~l~  368 (436)
T PRK07812        294 --ETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAG-GVEAGKAFVNALT  368 (436)
T ss_pred             --CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-CHHHHHHHHHhCC
Confidence              246777888888889999999986554322  20  1 10         1134689999864 2222  4666554

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.71  E-value=6.5e-16  Score=155.22  Aligned_cols=273  Identities=14%  Similarity=0.111  Sum_probs=169.2

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHHHHHHhC-CceEEecCCCCcC
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFKEAQKFC-NPQVIWSGKAEKY  194 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~~a~~~g-~~~~v~~~~~~~~  194 (430)
                      .+++++.+++++|.+   +++++ +||+.|+..++.+++++||+|++....+.+. .+.+..+..| +++.+.       
T Consensus        55 ~~~lE~~lA~l~g~~---~~l~~-~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-------  123 (385)
T PRK08574         55 LRPLEEALAKLEGGV---DALAF-NSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-------  123 (385)
T ss_pred             HHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-------
Confidence            457889999999975   34554 6899999999999999999999876655543 2222233445 443321       


Q ss_pred             CCCCCccccc--cCC-CccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          195 TKIPNFDALE--QNP-DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       195 g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                         +|+++++  +++ ++++|++.+++|+||.+.|  +|.++ +++|+++++|++++.|..  +++. ..|+++.|++||
T Consensus       124 ---~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~-GaDivv~S~sK~  199 (385)
T PRK08574        124 ---PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPLRH-GADFVVHSLTKY  199 (385)
T ss_pred             ---CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChhhh-CCcEEEeeCcee
Confidence               3456666  676 8999999999999999999  78876 789999999999987743  3332 248999999999


Q ss_pred             cc-CCc-c-EEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VG-PSG-V-TIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~g-p~G-~-g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++ +.. + |.+++ ++++.+++..       +.   .  ....+++....+.+...|+      -+..+.++..+.+.+
T Consensus       200 l~g~~d~~gG~vi~~~~~~~~~~~~-------~~---~--~~g~~~~p~~a~l~l~~l~------tL~~R~~~~~~na~~  261 (385)
T PRK08574        200 IAGHNDVVGGVAVAWSGEFLEELWE-------WR---R--RLGTIMQPFEAYLVLRGLK------TLEVRFERQCRNAMA  261 (385)
T ss_pred             ecCCCCceeEEEEECcHHHHHHHHH-------HH---H--hcCCCCCHHHHHHHHcccC------cHHHHHHHHHHHHHH
Confidence            95 543 2 54555 4555554321       10   0  0112333333333333333      245666777778888


Q ss_pred             HHHHHHccCCcee--cCC--CCCC----------C-ccceEEEEcCCCchhH--HHHHHHHHc--CCe-------e-cC-
Q 043610          343 LYNVIDGSNGFYK--CPV--EKSV----------R-SFMNVPFTLEKSDLEA--EFVKEAAKE--KMV-------Q-LK-  394 (430)
Q Consensus       343 l~~~l~~~~G~~~--~~~--~~~~----------r-s~~iv~f~~~~~~~~~--~~~~~L~~~--Gi~-------~-~~-  394 (430)
                      +.++|++.+.+.-  +|.  +.+.          . ...+++|.+++ +.+.  +|++.|+--  +.-       + .+ 
T Consensus       262 la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~-~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~~~  340 (385)
T PRK08574        262 IAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG-GRDAVLKFLRSLKLIKPSPSLGGVESLATYPV  340 (385)
T ss_pred             HHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC-CHHHHHHHHHcCCcceEccCCCCCcceeeCCC
Confidence            8889987554431  121  1110          1 34578899974 2222  455554321  110       0 01 


Q ss_pred             --CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          395 --GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       395 --g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                        .+.            ..+-||+|++.    ||++.|++-|...++
T Consensus       341 ~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~  383 (385)
T PRK08574        341 KSAASPIPEEDRKALGITEDLVRLSVGL----EDVEDLIEDLDQALG  383 (385)
T ss_pred             cCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence              110            12469999996    667777777666554

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.71  E-value=6.3e-15  Score=147.70  Aligned_cols=314  Identities=11%  Similarity=0.064  Sum_probs=188.7

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd  159 (430)
                      +.++.++++.+.+..    |+    ....    ....++.++.+++++|.+   +++++ +|+|+|+..++.++ ++|||
T Consensus         9 ~~~~e~~a~~~~~~~----~~----~~~~----g~~~~~~e~~la~~~g~~---~~v~~-~sgt~aL~~~l~al~~~pGd   72 (376)
T TIGR02379         9 VTGQELEYIAEAISE----GK----LSGD----GPFSRRCETWLENRTGTK---KALLT-PSCTAALEMAALLLDIQPGD   72 (376)
T ss_pred             CCHHHHHHHHHHHHc----CC----ccCC----cHHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHcCCCCcC
Confidence            566778888776642    11    1001    134567888899999875   56665 78999999988887 78999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN  233 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~  233 (430)
                      +|++....+.+..  ..+...| +++.++..+   .+..+|+++++  +++++++|+.+|   ++|...|  +|.++ ++
T Consensus        73 ~Viv~~~t~~~~~--~~~~~~G~~~v~vd~d~---~~~~~d~~~le~~i~~~tk~Iip~~---~~G~~~d~~~I~~la~~  144 (376)
T TIGR02379        73 EVIMPSYTFVSTA--NAFVLRGAKIVFVDIRP---DTMNIDETLIESAITHRTKAIVPVH---YAGVACDMDTIMALANK  144 (376)
T ss_pred             EEEECCCCcHHHH--HHHHHcCCEEEEEecCC---CcCCCCHHHHHHhcCcCceEEEEeC---CCCCccCHHHHHHHHHH
Confidence            9998776665532  3345667 888888753   22357888887  788999987654   5799888  78886 68


Q ss_pred             CCcEEEEeccCcCCCCc--cccccc-cEEEeCCC--ccc--cCCccEEEEEc-HHHHhccCCCC-----C-ccccccc--
Q 043610          234 STGILVADMSSNFCSKP--VDVTRF-GVIYAGAQ--KNV--GPSGVTIVIVR-KDLLGNAQDKT-----P-LMLDYKI--  297 (430)
Q Consensus       234 ~g~~lvvD~a~s~G~~~--idl~~~-d~~~~s~~--K~~--gp~G~g~l~v~-~~~~~~~~~~~-----p-~~~~~~~--  297 (430)
                      +|++++.|++|++|..-  ..+..+ |+.++|+|  |.+  |+.| |+++.+ +++.++++...     . .......  
T Consensus       145 ~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~l~~g~~g-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  223 (376)
T TIGR02379       145 HQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETKNYTSGGEG-GALLINDQAFIERAEIIREKGTNRSQFFRGEVDK  223 (376)
T ss_pred             CCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCCcCcccCCc-eEEEECCHHHHHHHHHHHHhCCCCccccccCCCc
Confidence            99999999999998741  112222 45566655  445  3455 766665 67766643210     0 0000000  


Q ss_pred             --hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC--C-ceecCCCCC-CCccceEEEE
Q 043610          298 --HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN--G-FYKCPVEKS-VRSFMNVPFT  371 (430)
Q Consensus       298 --~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~--G-~~~~~~~~~-~rs~~iv~f~  371 (430)
                        ...-+.. +-++-.....+...|+.      +++..++.++..++..+.|.+..  + +.+....+. ..+...+++.
T Consensus       224 ~~~~~~g~n-~~~~~~~Aa~g~~qL~~------l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~  296 (376)
T TIGR02379       224 YTWRDIGSS-YLPSELQAAYLWAQLEQ------ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIK  296 (376)
T ss_pred             ceeeeeccc-CCccHHHHHHHHHHHHH------hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEE
Confidence              0000100 01111111111122332      45666777777777777876532  2 222211111 1222345556


Q ss_pred             cCCCchhHHHHHHHHHcCCeecCCC----C----------C----------CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          372 LEKSDLEAEFVKEAAKEKMVQLKGH----R----------S----------VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~~~~g~----~----------~----------~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +++.....++.+.|+++||....++    .          .          ...+.+-++...+++|+++++++|++++
T Consensus       297 ~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~  375 (376)
T TIGR02379       297 LKDEDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL  375 (376)
T ss_pred             ECCcCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence            6542112379999999999753211    0          0          1247788888899999999999999874

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.71  E-value=1.5e-15  Score=146.21  Aligned_cols=332  Identities=17%  Similarity=0.170  Sum_probs=220.9

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHH-HHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIE-KAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~-~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +...+.+.+.---.++.|++++-..+.+-...|... .....+-++.+.+| .+.+..+++||++-. +|-  +-||+.|
T Consensus        25 q~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPg-kRyYgGce~VD~vE~laierak~LFga~~a-nVQ--PhSGs~A  100 (413)
T COG0112          25 QREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPG-KRYYGGCEYVDEVEELAIERAKKLFGAEYA-NVQ--PHSGSQA  100 (413)
T ss_pred             HhhceeeeeccccCCHHHHHHHhhhhhhccccCCCC-ccccCCCeeHHHHHHHHHHHHHHHhCCCcc-ccC--CCCchHH
Confidence            346778888888889999999999887644444411 12222445555555 457788889999853 443  4578999


Q ss_pred             HHHHHhhcCCCCCcEEEEeC---ChhHHHHHHHHHHhC---CceEEecCCCCcCCCCCCccccc---cCCCccEEEEeec
Q 043610          147 FAAVPLNLCTPNDPVDYIVT---GSWGDKAFKEAQKFC---NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICAN  217 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~---g~~~~~~~~~a~~~g---~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~  217 (430)
                      +.+++.++++|||.++-++-   ||.++.+  -.-..|   +.+..+++.  +. ..+|.|+++   ...++|+|+.-. 
T Consensus       101 N~av~~All~pGDtimgm~l~~GGHltHg~--~v~~sG~~~~~v~Y~vd~--et-~~IDyD~~~k~a~e~kPK~ii~G~-  174 (413)
T COG0112         101 NQAVYLALLQPGDTIMGLDLSHGGHLTHGS--PVNFSGKLFNVVSYGVDP--ET-GLIDYDEVEKLAKEVKPKLIIAGG-  174 (413)
T ss_pred             HHHHHHHHcCCCCeEecccCCCCCcccCCC--CCCccceeEEeEeccccc--cc-CccCHHHHHHHHHHhCCCEEEECc-
Confidence            99999999999999986543   3333310  000113   222333332  23 368999887   356788877753 


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCC-----CccccccccEEEeCCCccc-cCCccEEEEEcH-HHHhccCC
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS-----KPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRK-DLLGNAQD  287 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~-----~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~-~~~~~~~~  287 (430)
                       +..-..+|  ++.++ .+.|+++++|++|-.|-     .|-++...|+++.+.||.| ||.| |++..++ ++.++++.
T Consensus       175 -SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~  252 (413)
T COG0112         175 -SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPRG-GIILTNDEELAKKINS  252 (413)
T ss_pred             -cccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhh
Confidence             33344555  56676 58999999999986553     4545656799999999999 8999 8888875 66666553


Q ss_pred             -CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          288 -KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       288 -~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                       ..|..            .|.|-...+++...||.+..+ -+++.-.+...+.++.|.++|.+ .|++++.  ....+ +
T Consensus       253 aVFPg~------------qggpl~HviAakaVa~~Eal~-p~fk~Ya~qVv~NAkaLAe~l~~-~G~~vvs--GgTdn-H  315 (413)
T COG0112         253 AVFPGL------------QGGPLMHVIAAKAVAFKEALE-PEFKEYAKQVVKNAKALAEALKE-RGFKVVS--GGTDN-H  315 (413)
T ss_pred             hcCCcc------------CCChHHHHHHHHHHHHHHHcC-hhHHHHHHHHHHHHHHHHHHHHH-cCCeEec--CCccc-e
Confidence             22321            245666677777777776653 46788888888999999999996 8999875  11123 3


Q ss_pred             eEEEEcCCCchhH-HHHHHHHHcCCeecC----CC-C---CCCeeEEeecCCC----CHHHHHHHHHHHHHHHHh
Q 043610          367 NVPFTLEKSDLEA-EFVKEAAKEKMVQLK----GH-R---SVGGMRASIYNAM----PLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       367 iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~----g~-~---~~g~iRis~~~~~----t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+.+.+.+... +.-..|.+.||.+-.    .. .   ...+|||+.-.-+    .++|++++.+.|.+++..
T Consensus       316 l~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~  390 (413)
T COG0112         316 LVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG  390 (413)
T ss_pred             EEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence            4555655324444 455667888998632    21 1   1347999965433    588999999999887753

>PLN02509 cystathionine beta-lyase

Probab=99.71  E-value=1.1e-15  Score=156.09  Aligned_cols=275  Identities=12%  Similarity=0.056  Sum_probs=172.7

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+++++.++++.|.+   .++++ +|++.++.+++ .++++||+|++....+.+.. +. ....+.| +++.++.    
T Consensus       134 t~~aLE~~lA~leg~e---~ai~~-~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~----  204 (464)
T PLN02509        134 TRDALESLLAKLDKAD---RAFCF-TSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT----  204 (464)
T ss_pred             HHHHHHHHHHHHhCCC---EEEEe-CcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC----
Confidence            4678889999999865   34554 56788886654 57899999998776655532 22 2344567 5554432    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKN  266 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~  266 (430)
                           .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+.....+. ..|++++|++||
T Consensus       205 -----~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~  279 (464)
T PLN02509        205 -----TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKF  279 (464)
T ss_pred             -----CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCccc
Confidence                 3456666  7889999999999999999988  78886 68999999999988775432222 248999999999


Q ss_pred             cc-CCc--cEEEEEcHHHH-hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VG-PSG--VTIVIVRKDLL-GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~g-p~G--~g~l~v~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++ +.+  .|+++++++.+ +.+..     +      .+ ......+....+.+...|+      -++.+.++..+.+.+
T Consensus       280 l~G~gdv~gG~v~~~~~~l~~~~~~-----~------~~-~~g~~l~p~~A~l~lr~L~------tL~~R~~r~~~nA~~  341 (464)
T PLN02509        280 IAGHSDVMAGVLAVKGEKLAKEVYF-----L------QN-SEGSGLAPFDCWLCLRGIK------TMALRIEKQQENARK  341 (464)
T ss_pred             ccCCCccceeEEEeccHHHHHHHHH-----H------HH-hcCCCcCHHHHHHHHhhhh------hHHHHHHHHHHHHHH
Confidence            94 665  68888765432 22110     0      00 0111233333333333443      246678888888999


Q ss_pred             HHHHHHccCCcee--cCC---CCCC--------CccceEEEEcCCCchhH--HHHHHHHHcCCe---------e-cC---
Q 043610          343 LYNVIDGSNGFYK--CPV---EKSV--------RSFMNVPFTLEKSDLEA--EFVKEAAKEKMV---------Q-LK---  394 (430)
Q Consensus       343 l~~~l~~~~G~~~--~~~---~~~~--------rs~~iv~f~~~~~~~~~--~~~~~L~~~Gi~---------~-~~---  394 (430)
                      +.+.|++.+.+.-  +|.   .+.+        ...++++|.+.  +.+.  +|++.|+--.+.         + .+   
T Consensus       342 la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~--~~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~  419 (464)
T PLN02509        342 IAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG--SVALSKHLVETTKYFSIAVSFGSVKSLISMPCFM  419 (464)
T ss_pred             HHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC--CHHHHHHHHHcCCcceEcccCCCCCceeeCCccc
Confidence            9999987555431  121   1110        12467889883  2222  455554311111         0 01   


Q ss_pred             CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          395 GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       395 g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.            ..|-||+|++.    ||++.|++-|+..++.
T Consensus       420 sh~~~~~~~~~~~Gi~~~liRlSvGl----E~~~DLi~Dl~~Al~~  461 (464)
T PLN02509        420 SHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFRT  461 (464)
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHcc
Confidence            111            13469999996    6788888777776653

>PRK05939 hypothetical protein; Provisional

Probab=99.71  E-value=1.2e-15  Score=153.85  Aligned_cols=288  Identities=10%  Similarity=0.015  Sum_probs=175.1

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCc
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+++++.++++.|...  . +++ ++|+.|+..++.++++|||+|++....+.+.. +....++.| +++.++.     
T Consensus        48 ~~~~lE~~la~leg~~~--~-v~~-ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-----  118 (397)
T PRK05939         48 TTAALEAKITKMEGGVG--T-VCF-ATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-----  118 (397)
T ss_pred             HHHHHHHHHHHHhCCCe--E-EEe-CCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-----
Confidence            35588899999999874  3 444 56799999999999999999987665443332 234455677 6665543     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccccc--ccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTR--FGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~--~d~~~~s~~K~  266 (430)
                          .|+++++  ++++|++|++.+++|++|.+.|  +|.++ +++|+++++|++++.+.. ++..+  .|+++.|++|+
T Consensus       119 ----~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~-~~~~~~gaDivv~S~sK~  193 (397)
T PRK05939        119 ----TDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL-FRPKDVGASLVINSLSKY  193 (397)
T ss_pred             ----CCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc-cCccccCCEEEEecCeec
Confidence                3566776  7889999999999999999999  78886 789999999999876642 33333  47999999999


Q ss_pred             ccCCc--cEEEEEcHHHHhccC--CCCCcccccc-----c-hhhc---CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHH
Q 043610          267 VGPSG--VTIVIVRKDLLGNAQ--DKTPLMLDYK-----I-HDEN---NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVE  333 (430)
Q Consensus       267 ~gp~G--~g~l~v~~~~~~~~~--~~~p~~~~~~-----~-~~~~---~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~  333 (430)
                      ++..|  +|.+++.+...+...  .....+.++.     . ....   .....+++....+.+...|+      -+..+.
T Consensus       194 ~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~------tl~~R~  267 (397)
T PRK05939        194 IAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAE------TLALRV  267 (397)
T ss_pred             ccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcC------cHHHHH
Confidence            97556  566655422211100  0000000000     0 0000   01222444444443333333      355666


Q ss_pred             HHHHHHHHHHHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCCchhH-HHHHHHHH--cCCe------
Q 043610          334 KMNRKKAELLYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKSDLEA-EFVKEAAK--EKMV------  391 (430)
Q Consensus       334 ~~~~~l~~~l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~~~~~-~~~~~L~~--~Gi~------  391 (430)
                      +++.+.+..+.++|++.+.+.-  +|.   .+.        .....+++|.+.+.+ .. +|+++|+-  .+.-      
T Consensus       268 ~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~-~~~~f~~~l~l~~~~~s~G~~~s  346 (397)
T PRK05939        268 DRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGI-DCFDFLNRLKLVIKATHLGDTRT  346 (397)
T ss_pred             HHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHH-HHHHHHHhCCcceEccCCCCCCe
Confidence            7777788889999987543321  121   110        123467889987422 22 46655532  1110      


Q ss_pred             -ec-C---CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          392 -QL-K---GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       392 -~~-~---g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       +. +   .+.            ..+-||+|++.    ||++.|++-|+..+++
T Consensus       347 l~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl----Ed~~dLi~dl~~Al~~  396 (397)
T PRK05939        347 LVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI----EDEADLIADFEQALDA  396 (397)
T ss_pred             eeecCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHhc
Confidence             10 0   010            13469999996    6788888887777654

>PLN02397 aspartate transaminase

Probab=99.69  E-value=3.1e-15  Score=152.44  Aligned_cols=255  Identities=14%  Similarity=0.107  Sum_probs=158.7

Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c---CCCccEEEEeec
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q---NPDAKYLHICAN  217 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i---~~~~~lv~i~~~  217 (430)
                      +.++...+..++.|||+|++.++.+..+.  ..++..| +++.++...++++  .+|++.++  +   .+++++++++++
T Consensus       128 a~~l~~~~~~~~~pGd~Vlv~~P~y~~y~--~~~~~~g~~~~~v~l~~~~~~--~~d~~~l~~~l~~~~~~~~~i~~~~P  203 (423)
T PLN02397        128 SLRLGAEFLARFYPGSTIYIPNPTWGNHH--NIFRDAGVPVRTYRYYDPKTR--GLDFDGLLEDLKAAPDGSFVLLHACA  203 (423)
T ss_pred             HHHHHHHHHHHhCCCCEEEEeCCCchhHH--HHHHHcCCeEEEeecccCcCC--ccCHHHHHHHHHhCCCCCEEEEeCCC
Confidence            33444445555579999998887766543  3456667 8888876321123  36777654  3   367889999999


Q ss_pred             CCCccccCC--C---Cccc-cCCCcEEEEeccCc-C--CC-----Ccc-ccccc-c--EEEeCCCccccCCc--cEEEE-
Q 043610          218 ETIHGVEFK--E---YPSA-KNSTGILVADMSSN-F--CS-----KPV-DVTRF-G--VIYAGAQKNVGPSG--VTIVI-  276 (430)
Q Consensus       218 ~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~--G~-----~~i-dl~~~-d--~~~~s~~K~~gp~G--~g~l~-  276 (430)
                      +||||.+++  +   |.++ +++|++++.|+++. +  +.     .++ .+... +  +++.|++|.+|++|  +||++ 
T Consensus       204 ~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~  283 (423)
T PLN02397        204 HNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSV  283 (423)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEE
Confidence            999999999  3   4443 57899999999864 2  21     011 11111 2  67889999999999  88885 


Q ss_pred             -E-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HHh--cCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          277 -V-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LEL--GGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       277 -v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~~--~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                       + +++.++.+....   ...     .......++...+.++..+|+.-  .+.  ..++.++++++++++.+++.|++ 
T Consensus       284 ~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~-  354 (423)
T PLN02397        284 VCKSADVAVRVKSQL---KLI-----ARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEA-  354 (423)
T ss_pred             EeCCHHHHHHHHHHH---HHH-----HhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence             4 455443211000   000     00112234556666666666421  000  12567888999999999999997 


Q ss_pred             CC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          351 NG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       351 ~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .|    +.+..  +  .. +.+. .++   .+.+++++| +++||.+.++     + ||++.+ .++++++.+++.|+++
T Consensus       355 ~~~~~~~~~~~--p--~g-g~fl-~~~---l~~~~~~~Ll~~~~V~v~~~-----~-Ri~~~~-~~~~~i~~~~~~i~~~  418 (423)
T PLN02397        355 RGSPGDWSHIT--K--QI-GMFS-FTG---LNKEQVDRMTKEYHIYMTRD-----G-RISMAG-LSSKNVPYLADAIHAV  418 (423)
T ss_pred             cCCCCCCCccc--C--Cc-eEEE-ecC---CCHHHHHHHHHhCCEEECCC-----C-eEEEee-CCHHHHHHHHHHHHHH
Confidence            45    43321  1  12 2222 222   234588887 5669998632     2 999963 5789999999999998


Q ss_pred             HH
Q 043610          426 QA  427 (430)
Q Consensus       426 ~~  427 (430)
                      +.
T Consensus       419 ~~  420 (423)
T PLN02397        419 VT  420 (423)
T ss_pred             Hh
Confidence            75

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.69  E-value=1.4e-15  Score=152.05  Aligned_cols=271  Identities=15%  Similarity=0.114  Sum_probs=169.3

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.++++.|++.  . +++ +||++++..++ +++++||+|++..+.+.+..  +....++.| +++.++.     
T Consensus        54 ~~~le~~la~l~g~~~--~-~~~-~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~-----  123 (366)
T PRK08247         54 RGVLEQAIADLEGGDQ--G-FAC-SSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT-----  123 (366)
T ss_pred             HHHHHHHHHHHhCCCc--E-EEE-cCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC-----
Confidence            4588899999999974  3 444 67899999765 67789999998776654421  222344567 5554432     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~K~  266 (430)
                          .|+++++  +++++++|++++++||+|...+  +|.++ +++|+++++|++++.+.  .|++. ..|+++.|++|+
T Consensus       124 ----~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~~~-g~di~i~S~sK~  198 (366)
T PRK08247        124 ----ASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPLEE-GADIVIHSATKY  198 (366)
T ss_pred             ----CCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCchhc-CCcEEEeeccee
Confidence                3566776  6789999999999999998888  78886 68999999999985443  33321 248999999999


Q ss_pred             cc-CCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VG-PSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~g-p~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++ +.+  .|+++.+ +++.+.+..       +.   .  ......+.+..+.+..+|+      -+....++.++.++.
T Consensus       199 ~~g~~d~~~G~iv~~~~~l~~~~~~-------~~---~--~~g~~~s~~~a~l~~~~l~------tl~~r~~~~~~~a~~  260 (366)
T PRK08247        199 LGGHNDVLAGLVVAKGQELCERLAY-------YQ---N--AAGAVLSPFDSWLLIRGMK------TLALRMRQHEENAKA  260 (366)
T ss_pred             ccCCCceeeeEEecChHHHHHHHHH-------HH---H--hcCCCCChHHHHHHHhccC------cHHHHHHHHHHHHHH
Confidence            96 444  4666665 455544321       00   0  0112333344444444443      234556677888899


Q ss_pred             HHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHH----------cCCeecCCC---C------------
Q 043610          343 LYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAK----------EKMVQLKGH---R------------  397 (430)
Q Consensus       343 l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~----------~Gi~~~~g~---~------------  397 (430)
                      +.++|++.+++..+. .|. . .+.++|.+++.....+|++.|.-          ++++..++.   .            
T Consensus       261 l~~~L~~~p~v~~v~-~P~-~-gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi  337 (366)
T PRK08247        261 IAAFLNEQPGVTDVL-YPG-R-GGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGV  337 (366)
T ss_pred             HHHHHHhCCCeeEEe-cCC-c-CcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCC
Confidence            999999766765421 121 1 35678887531111134444331          122223321   0            


Q ss_pred             CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          398 SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       398 ~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ..+-+|+|++.    ||++.+++-|+..++
T Consensus       338 ~~~~~R~svGl----E~~~dl~~dl~~al~  363 (366)
T PRK08247        338 CNRLLRFSVGI----ENVEDLIADLKQAFK  363 (366)
T ss_pred             CCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence            12369999996    666666666666554

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.69  E-value=5.3e-15  Score=135.06  Aligned_cols=336  Identities=16%  Similarity=0.115  Sum_probs=214.0

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccC--CCcHH-HHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMS--HRGKE-FKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~--~~~~~-~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ..+|.+|=.  +.++++.++++.++     +.|.|+-...  .+-.+ -.-.+....+.|++++|.+   ++=+ |.|+-
T Consensus        16 ~~iNv~PiQrGGiLt~eArkal~E~-----gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D---~~R~-t~GAR   86 (382)
T COG1103          16 GFINVNPIQRGGILTEEARKALLEW-----GDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD---EVRV-TAGAR   86 (382)
T ss_pred             CccccChhhccCcCCHHHHHHHHHh-----cCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCc---eeee-cccch
Confidence            345555522  46788888887764     3466654332  11111 1223446667799999997   3444 58999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcccc----c-c-C---CCccEEEE
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDAL----E-Q-N---PDAKYLHI  214 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l----~-i-~---~~~~lv~i  214 (430)
                      ++=.+++.+++++||-|++-.+.+|..  +-.|++.| .+..|+...-.++  .++++.+    + . +   +.+.+..+
T Consensus        87 e~KfavMhal~~~gd~vV~D~~aHYtt--yvAAEragl~v~eVp~tg~Pey--~i~~e~y~~viee~~~~~g~~~~lall  162 (382)
T COG1103          87 EAKFAVMHALCKEGDWVVVDSLAHYTT--YVAAERAGLNVAEVPNTGYPEY--KITPEGYAEVIEEVKDEGGDPPALALL  162 (382)
T ss_pred             hhHHHHHHHhccCCCEEEEcCcchHHH--HHHHHhcCCeEEecCCCCCCce--EecHHHHHHHHHHHHhccCCCceEEEE
Confidence            999999999999999887655566654  33577888 8887875321112  3455543    2 1 1   34789999


Q ss_pred             eecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCc-cEEEEEcHHHHhccCCC
Q 043610          215 CANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSG-VTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       215 ~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G-~g~l~v~~~~~~~~~~~  288 (430)
                      +|++...|.+.|  +++.+ +++|+.+++.+++..|-+|++....  ||+++|+||..+-.| +|+|-.+++.-+.+...
T Consensus       163 Th~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~  242 (382)
T COG1103         163 THVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRR  242 (382)
T ss_pred             eccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhh
Confidence            999999999999  78886 7999999999999999999998877  799999999996444 89999999887663221


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      ...++.-+.. +  ...-|.--+.+..+.++|-+..+.   -..++..-+.++++.+.+.++-|+..+...|.+.-  .+
T Consensus       243 Sg~~~~~KEv-e--llGCT~rGapivTlmASfP~V~eR---VkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~Hd--Lm  314 (382)
T COG1103         243 SGRAFPKKEV-E--LLGCTVRGAPIVTLMASFPHVVER---VKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHD--LM  314 (382)
T ss_pred             ccccccccee-e--eecccccCchHHHHHhcCHHHHHH---HHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccc--ee
Confidence            1111111100 0  000121122333444444433221   12333444556788889988656877764443222  34


Q ss_pred             EEEcCCCc-hhH-------HHHHHHHHcCCeec-CCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          369 PFTLEKSD-LEA-------EFVKEAAKEKMVQL-KGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       369 ~f~~~~~~-~~~-------~~~~~L~~~Gi~~~-~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      -|.-|... +.+       =+.+.|++.||... +|.  -.++.+|.++ .++|+++..++++++++.+.
T Consensus       315 ~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~--Tk~~K~svyG-l~~Eqve~V~~afkeI~eky  381 (382)
T COG1103         315 KFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQ--TKYFKLSVYG-LSWEQVEYVVDAFKEIAEKY  381 (382)
T ss_pred             eecCchHHHHHHhCcCCceeeHHHHHhcCccccccCc--eeEEEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence            45555210 010       15667777777632 332  1268999875 67999999999999998754

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.69  E-value=1.4e-14  Score=146.25  Aligned_cols=321  Identities=10%  Similarity=0.073  Sum_probs=191.1

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-     +--+|.|.+++.+.+.+....+.    . ...    ....++.+.|+++.+.  + +++++ +|
T Consensus        30 G~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~----~-~~~----~~~~~la~~l~~~~~~--~-~v~~~-~s   96 (389)
T PRK01278         30 GERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSN----L-YRI----PEQERLAERLVENSFA--D-KVFFT-NS   96 (389)
T ss_pred             CCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCcccc----c-cCC----hHHHHHHHHHHhhCCC--C-EEEEc-CC
Confidence            34455554432     33478999999998865222111    0 111    2234566777777643  3 67775 78


Q ss_pred             HHHHHHHHHhhc----CCCCC----cEEEEeCChhHHHHHHHHHHh-CCceEEecCCC--CcCC--CCCCccccc--cCC
Q 043610          143 ATTQFAAVPLNL----CTPND----PVDYIVTGSWGDKAFKEAQKF-CNPQVIWSGKA--EKYT--KIPNFDALE--QNP  207 (430)
Q Consensus       143 aT~a~~~~~~sl----~~~gd----~vl~~~~g~~~~~~~~~a~~~-g~~~~v~~~~~--~~~g--~~~d~~~l~--i~~  207 (430)
                      |++|++.++...    ..+||    +|++++.++.+...  .+... +.........+  .++.  ..+|+++++  +++
T Consensus        97 GseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  174 (389)
T PRK01278         97 GAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTL--ATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP  174 (389)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcH--HHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC
Confidence            999999887664    34565    78877777665421  11122 22211110000  0011  114666776  677


Q ss_pred             CccEEEEeecCCCccc-cCC-----CCccc-cCCCcEEEEeccCc-CCCC----ccccccc--cEEEeCCCccccCCc--
Q 043610          208 DAKYLHICANETIHGV-EFK-----EYPSA-KNSTGILVADMSSN-FCSK----PVDVTRF--GVIYAGAQKNVGPSG--  271 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~-~~p-----ei~~~-~~~g~~lvvD~a~s-~G~~----~idl~~~--d~~~~s~~K~~gp~G--  271 (430)
                      ++++|++..+++++|. ..+     +|.++ +++|+++++|++|+ +|..    ..+...+  |+  .+..|.++ .|  
T Consensus       175 ~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi--~t~sK~l~-~G~~  251 (389)
T PRK01278        175 NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDI--MAVAKGIG-GGFP  251 (389)
T ss_pred             CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCE--EEEehhcc-CCcc
Confidence            8999999988888884 444     35554 58999999999987 4321    1111112  43  46789997 35  


Q ss_pred             cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      +|+++.++++.+.+....           ...+ ++.|...+.++.++|+.+.+    +...++.+++.+++++.+++..
T Consensus       252 ig~~~~~~~~~~~~~~~~-----------~~~t-~~~~~~~~aaa~a~l~~l~~----~~~~~~~~~~~~~l~~~l~~l~  315 (389)
T PRK01278        252 LGACLATEEAAKGMTPGT-----------HGST-YGGNPLAMAVGNAVLDVILA----PGFLDNVQRMGLYLKQKLEGLV  315 (389)
T ss_pred             eEEEEEcHHHHhccCCCC-----------CCCC-CCccHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHHHHHHHHH
Confidence            899999988876543210           1112 24567788888888987753    2344555555566666655421


Q ss_pred             -Cce-ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          352 -GFY-KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       352 -G~~-~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       ... ++. +..... ..+.+.++.  ...+|.++|.++||.+.++.  .+.+||++...+++++++++++.|++++++
T Consensus       316 ~~~~~~~~-~v~g~G-~~~~i~~~~--~~~~~~~~l~~~GV~~~p~~--~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        316 DRFPDVIE-EVRGKG-LLLGLKCVV--PNRDLVQALRDEGLLTVGAG--DNVVRLLPPLIITEEEIDEALERLERAAES  388 (389)
T ss_pred             hhCCCcee-eEeccc-EEEEEEEec--CHHHHHHHHHHCCeEEeecC--CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence             011 111 100112 223344432  23379999998999988753  357999998788999999999999998764

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.69  E-value=1e-14  Score=147.33  Aligned_cols=320  Identities=12%  Similarity=0.053  Sum_probs=192.0

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +.-.+.|.+++.+.+.+... .     ...+.   ....+++.+.|+++.+.  + +++++ +
T Consensus        37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~-~-----~~~~~---~~~~~~la~~l~~~~~~--~-~v~~~-~  103 (396)
T PRK02627         37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIH-T-----SNLYY---IEPQEELAEKLVELSGM--D-KVFFC-N  103 (396)
T ss_pred             CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccc-c-----ccccC---CHHHHHHHHHHHhhcCC--C-EEEEC-C
Confidence            344455565532     22357899999888754211 0     11111   23445777888888765  3 67775 7


Q ss_pred             cHHHHHHHHHhhcCCCC-------CcEEEEeCChhHHHHHHHHHHh-CCceE----EecCCCCcCCC--CCCccccc--c
Q 043610          142 GATTQFAAVPLNLCTPN-------DPVDYIVTGSWGDKAFKEAQKF-CNPQV----IWSGKAEKYTK--IPNFDALE--Q  205 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~g-------d~vl~~~~g~~~~~~~~~a~~~-g~~~~----v~~~~~~~~g~--~~d~~~l~--i  205 (430)
                      |+++|+++++..+...+       +++++...++.+....  +... +....    .+...  ++-.  ..|+++++  +
T Consensus       104 gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i  179 (396)
T PRK02627        104 SGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLA--TLSATGQPKYQEGFEPLVE--GFIYVPFNDIEALKAAI  179 (396)
T ss_pred             CcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHH--HHHhcCCccccccCCCCCC--CceEeCCCCHHHHHHhc
Confidence            89999999888553222       5677776665553221  1111 21110    11100  0100  12666776  6


Q ss_pred             CCCccEEEEeecCCCccc-cCC-----CCccc-cCCCcEEEEeccCc-CCCC--c--cccccc--cEEEeCCCccccCCc
Q 043610          206 NPDAKYLHICANETIHGV-EFK-----EYPSA-KNSTGILVADMSSN-FCSK--P--VDVTRF--GVIYAGAQKNVGPSG  271 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~-~~p-----ei~~~-~~~g~~lvvD~a~s-~G~~--~--idl~~~--d~~~~s~~K~~gp~G  271 (430)
                      .+++++|++..+++++|. ..+     +|.++ +++|+++++|++++ +|..  .  ++....  |++  +++|.+| +|
T Consensus       180 ~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~~~-~G  256 (396)
T PRK02627        180 TDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIM--TLAKGLG-GG  256 (396)
T ss_pred             CCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEE--EEcchhh-CC
Confidence            788999999999999994 444     35554 58999999999976 5421  1  111111  444  5779998 46


Q ss_pred             --cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          272 --VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       272 --~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                        +|++++++++++.+....           .... .+.+...++++.++|+.+.+    +...++.+++.+++++.|.+
T Consensus       257 ~rig~~~~~~~~~~~~~~~~-----------~~~t-~~~~~~~~~aa~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~  320 (396)
T PRK02627        257 VPIGAVLAKEKVADVFTPGD-----------HGST-FGGNPLACAAALAVIEIIEE----EGLLENAAEVGEYLRAKLRE  320 (396)
T ss_pred             cccEEEEEcHHHHhccCCCC-----------CCCC-CCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHH
Confidence              899999988876543210           0111 24566788888888887653    23455666666666666654


Q ss_pred             cC-CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          350 SN-GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       350 ~~-G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .. .+..+. .....+ ..+.+.++.  ...++.++|.++||.+.++.  .+.+||++....++++++++++.|++++++
T Consensus       321 ~~~~~~~~~-~~~~~g-~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~  394 (396)
T PRK02627        321 LLEKYPGIK-EVRGLG-LMIGIELDR--PAAEIVKKALEKGLLINVTG--DNVLRLLPPLIISKEEIDEAVDRLEEVLKE  394 (396)
T ss_pred             HHHhCCCee-eeccCc-EEEEEEecC--cHHHHHHHHHHCCeEEeecC--CCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence            21 111110 111112 234455532  23479999988999987642  357999998788999999999999998875

>PLN02368 alanine transaminase

Probab=99.69  E-value=1.7e-15  Score=153.08  Aligned_cols=222  Identities=10%  Similarity=0.057  Sum_probs=151.5

Q ss_pred             HHHHHHHHHHHHhCC--CCCcEEEEEeCcHHHHHHHHHhhcC-CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC
Q 043610          116 IIEKAESDLRALLNI--PQEYSVLFLQGGATTQFAAVPLNLC-TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       116 ~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~a~~~~~~sl~-~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~  191 (430)
                      +.+.+.+.+.+..|.  +++ +|++ ++|+++++..++..++ +|||+|++..+++..+.  ..++..| +++.++..++
T Consensus       112 LR~aia~~~~~~~g~~~~~~-~I~i-t~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~--~~~~~~g~~~v~v~~~~~  187 (407)
T PLN02368        112 VRKEVAEFIERRDGYPSDPE-LIFL-TDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS--ATISLLGGTLVPYYLEES  187 (407)
T ss_pred             HHHHHHHHHHHhcCCCCChh-hEEE-cccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH--HHHHHcCCEEEEEecccc
Confidence            334444555444464  454 6766 5789999999999887 79999998888776653  3455667 7777777543


Q ss_pred             CcCCCCCCccccc--cCC------CccEEEEeecCCCccccCC--CC---ccc-cCCCcEEEEeccCcC----CCCc-cc
Q 043610          192 EKYTKIPNFDALE--QNP------DAKYLHICANETIHGVEFK--EY---PSA-KNSTGILVADMSSNF----CSKP-VD  252 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~----G~~~-id  252 (430)
                      .+|  .+|+++++  +++      ++|++++++++||||.+++  ++   .++ +++|++++.|+++..    +..+ ..
T Consensus       188 ~~~--~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s  265 (407)
T PLN02368        188 ENW--GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFIS  265 (407)
T ss_pred             cCC--CCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccc
Confidence            234  47888886  443      6899999999999999999  44   343 578999999998753    2111 11


Q ss_pred             -------cc----ccc--EEEeCCCccc-cCCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHH
Q 043610          253 -------VT----RFG--VIYAGAQKNV-GPSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCI  313 (430)
Q Consensus       253 -------l~----~~d--~~~~s~~K~~-gp~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~  313 (430)
                             +.    +.+  +++.|++|.+ |++|  +||+++   ++++++.+....             ....++|.+.+
T Consensus       266 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-------------~~~~~~~~~~Q  332 (407)
T PLN02368        266 AKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-------------SIALSPNVSGQ  332 (407)
T ss_pred             HHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-------------cccCCCCcHHH
Confidence                   11    122  6789999999 8889  888884   777777643210             01124677788


Q ss_pred             HHHHHHHHHH-------HH-hcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          314 YMCGLVFEYL-------LE-LGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       314 ~a~~~al~~l-------~~-~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      +++.++|+.-       .. ....+++.+.++++++.+.+.|.+..|+.+.
T Consensus       333 ~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~  383 (407)
T PLN02368        333 IFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCN  383 (407)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeC
Confidence            8888887411       00 0013456788899999999999986687664

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.69  E-value=3.1e-14  Score=142.93  Aligned_cols=296  Identities=10%  Similarity=0.031  Sum_probs=179.5

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..++.++.+++++|.+   +++++ +|+|+|+.+++..+ +++||+|++....+.+.  ...++..| +++.++..+   
T Consensus        32 ~~~~~e~~la~~~g~~---~~v~~-~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~--~~~~~~~G~~~v~~d~d~---  102 (375)
T PRK11706         32 FTRRCQQWLEQRFGSA---KVLLT-PSCTAALEMAALLLDIQPGDEVIMPSYTFVST--ANAFVLRGAKIVFVDIRP---  102 (375)
T ss_pred             HHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHhCCCCCCEEEECCCCcHHH--HHHHHHcCCEEEEEecCC---
Confidence            3567778899999985   57775 78999999877766 68999999877666554  23455668 888787753   


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc--cccccc-cEEEeCCC-
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP--VDVTRF-GVIYAGAQ-  264 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~~-d~~~~s~~-  264 (430)
                      .+..+|+++++  +++++++|+++|   ++|...+  +|.++ +++|++++.|++|++|...  ..+..+ |+-++|+| 
T Consensus       103 ~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~  179 (375)
T PRK11706        103 DTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHE  179 (375)
T ss_pred             CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCC
Confidence            23357888887  788999999875   4798888  78776 6899999999999999741  112222 56667777 


Q ss_pred             -ccccCCccEEEEE-cHHHHhccCCCC------CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043610          265 -KNVGPSGVTIVIV-RKDLLGNAQDKT------PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN  336 (430)
Q Consensus       265 -K~~gp~G~g~l~v-~~~~~~~~~~~~------p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~  336 (430)
                       |.+++..-|.+++ ++++.+++....      ..++............|+..-..-..+...+..+.   .++.+.++.
T Consensus       180 ~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~---~l~~~~~~R  256 (375)
T PRK11706        180 TKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLE---AADRINQRR  256 (375)
T ss_pred             CccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHH---HHHHHHHHH
Confidence             9997521243444 456655432100      00000000000000011111111111222223232   257777888


Q ss_pred             HHHHHHHHHHHHccC--C-ceecCCCCC-CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC----------------
Q 043610          337 RKKAELLYNVIDGSN--G-FYKCPVEKS-VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH----------------  396 (430)
Q Consensus       337 ~~l~~~l~~~l~~~~--G-~~~~~~~~~-~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~----------------  396 (430)
                      +++.++.++.|.+..  | +.+....+. ..+...+.+.+++.....++.+.|.++||.....+                
T Consensus       257 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~  336 (375)
T PRK11706        257 LALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFH  336 (375)
T ss_pred             HHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCC
Confidence            888888888887643  2 332211111 11223444555532222379999999999742111                


Q ss_pred             C--------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          397 R--------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       397 ~--------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .        ....+-+-++...+++|++.++++|++++
T Consensus       337 ~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~  374 (375)
T PRK11706        337 GEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF  374 (375)
T ss_pred             CCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence            0        01247777888889999999999999875

>PRK07049 methionine gamma-lyase; Validated

Probab=99.69  E-value=1.8e-15  Score=153.97  Aligned_cols=275  Identities=15%  Similarity=0.081  Sum_probs=174.2

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHH--HHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAF--KEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~--~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+++.|.+   +++++ +||++|+..++.+++++||+|++..+.+.+....  ..++..| +++.+..     
T Consensus        85 ~~~Le~~lA~leg~~---~~iv~-~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~-----  155 (427)
T PRK07049         85 SEIVEDRLAVYEGAE---SAALF-SSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD-----  155 (427)
T ss_pred             HHHHHHHHHHHhCCC---cEEEE-ccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC-----
Confidence            347889999999965   35555 6788999999999999999998876665554321  2234567 5444432     


Q ss_pred             CCCCCCccccc--c-----CCCccEEEEeecCCCccccCC--CCccc-cC------CCcEEEEeccCcCC--CCcccccc
Q 043610          194 YTKIPNFDALE--Q-----NPDAKYLHICANETIHGVEFK--EYPSA-KN------STGILVADMSSNFC--SKPVDVTR  255 (430)
Q Consensus       194 ~g~~~d~~~l~--i-----~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~------~g~~lvvD~a~s~G--~~~idl~~  255 (430)
                       +  .|.++++  +     .+++++|++++++||||.+.|  +|.++ +.      +++++++|.+..-.  ..|++. .
T Consensus       156 -~--~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~-g  231 (427)
T PRK07049        156 -G--LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEH-G  231 (427)
T ss_pred             -C--CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCcccc-C
Confidence             1  2334443  2     367999999999999999999  56664 22      68999999985322  233332 2


Q ss_pred             ccEEEeCCCcccc-CCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610          256 FGVIYAGAQKNVG-PSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV  332 (430)
Q Consensus       256 ~d~~~~s~~K~~g-p~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v  332 (430)
                      .|+++.|++|++| .+|  +|+++.++++++.+....          .  ...++.+....+.+...|+.      +..+
T Consensus       232 ~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~----------~--~~g~~ls~~~a~l~~r~L~t------l~~R  293 (427)
T PRK07049        232 ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALR----------S--AIGTQLDPHSCWMLGRSLET------LVLR  293 (427)
T ss_pred             CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHH----------H--hcCCCCCHHHHHHHHcCCCh------HHHH
Confidence            3799999999996 677  788888888776543210          0  11235566666666555543      3455


Q ss_pred             HHHHHHHHHHHHHHHHccCCceec--C-CC-CCC-----------CccceEEEEcCCCchhH--HHHHHHHHcCCe----
Q 043610          333 EKMNRKKAELLYNVIDGSNGFYKC--P-VE-KSV-----------RSFMNVPFTLEKSDLEA--EFVKEAAKEKMV----  391 (430)
Q Consensus       333 ~~~~~~l~~~l~~~l~~~~G~~~~--~-~~-~~~-----------rs~~iv~f~~~~~~~~~--~~~~~L~~~Gi~----  391 (430)
                      .++..+.+..+.++|++.+++.-+  | .- +++           ...++++|.+.+ +.+.  +|++.|+--.+.    
T Consensus       294 ~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~l~~~~~slG  372 (427)
T PRK07049        294 MERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKG-GQAAAFRFLNALQIFKLAVSLG  372 (427)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcC-CHHHHHHHHHcCcccEEcccCC
Confidence            666678888899999876554321  2 10 111           124588999864 2222  466655421111    


Q ss_pred             ------ecC---CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          392 ------QLK---GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       392 ------~~~---g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                            ..+   .+.            ..+-||+|++.    ||++.|++-|++.++
T Consensus       373 ~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~  425 (427)
T PRK07049        373 GTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI----EHPDDLIADLAQALD  425 (427)
T ss_pred             CCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence                  001   110            13469999996    777777777777664

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.68  E-value=4.8e-15  Score=150.69  Aligned_cols=151  Identities=13%  Similarity=0.039  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-H-HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-K-AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~-~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.|++++|.+   ..+++ +||++|+..++.+++++||+|++....+.+. . +...++..| +++.++.     
T Consensus        59 ~~~le~~lA~l~g~~---~~v~~-~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~-----  129 (418)
T TIGR01326        59 TDVLEQRIAALEGGV---AALAV-ASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP-----  129 (418)
T ss_pred             HHHHHHHHHHHhCCC---eEEEE-ccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC-----
Confidence            468899999999974   45554 7899999999999889999998776554332 1 223455667 6655542     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCccc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNV  267 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~  267 (430)
                          .|+++++  +++++++|++.+++|++|.+.|  +|.++ +++|+++++|++++.+.....+. ..|+++.|++|++
T Consensus       130 ----~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l  205 (418)
T TIGR01326       130 ----DDPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYI  205 (418)
T ss_pred             ----CCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccc
Confidence                2556676  6789999999999999999999  78886 68999999999998664322221 2489999999999


Q ss_pred             cCCc--cEEEEEcHH
Q 043610          268 GPSG--VTIVIVRKD  280 (430)
Q Consensus       268 gp~G--~g~l~v~~~  280 (430)
                      |++|  +|+++++++
T Consensus       206 ~g~G~~lGg~v~~~~  220 (418)
T TIGR01326       206 GGHGTAIGGVIVDGG  220 (418)
T ss_pred             cCCccceEEEEEecc
Confidence            8777  888888653

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.68  E-value=3.2e-16  Score=138.09  Aligned_cols=157  Identities=25%  Similarity=0.231  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT  195 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g  195 (430)
                      ++++++.++++++.+.+ +++++ .|+|+|+..++.++.+++++|++..+.+++..| ..++..| +++.++....  ..
T Consensus         2 ~~~~~~~l~~~~~~~~~-~~~~~-~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~--~~   76 (170)
T cd01494           2 LEELEEKLARLLQPGND-KAVFV-PSGTGANEAALLALLGPGDEVIVDANGHGSRYW-VAAELAGAKPVPVPVDDA--GY   76 (170)
T ss_pred             HHHHHHHHHHHcCCCCC-cEEEe-CCcHHHHHHHHHHhCCCCCEEEEeecccceehh-hHHHhcCCEEEEeccCCC--Cc
Confidence            46889999999975444 67776 589999999999998889999988888887765 4556667 7777765431  11


Q ss_pred             CCCCccccc---cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc---cccc--ccEEEeCCC
Q 043610          196 KIPNFDALE---QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV---DVTR--FGVIYAGAQ  264 (430)
Q Consensus       196 ~~~d~~~l~---i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i---dl~~--~d~~~~s~~  264 (430)
                      ...+.+.++   ..+++++++++++++++|...|  +|.++ +++|+++++|+++..+..+.   +...  .|+++.|+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~  156 (170)
T cd01494          77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLH  156 (170)
T ss_pred             cchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcc
Confidence            122222332   4678999999999999999998  78886 68999999999999887764   3333  479999999


Q ss_pred             ccccCCccEEEEEc
Q 043610          265 KNVGPSGVTIVIVR  278 (430)
Q Consensus       265 K~~gp~G~g~l~v~  278 (430)
                      ||+|++|+|+++++
T Consensus       157 K~~~~~~~G~l~~~  170 (170)
T cd01494         157 KNLGGEGGGVVIVK  170 (170)
T ss_pred             cccCCCceEEEEeC
Confidence            99987899999875

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.68  E-value=2.6e-15  Score=150.54  Aligned_cols=272  Identities=14%  Similarity=0.078  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+++++.++++.|.+.  . +++ ++|+.++..++ ++++|||+|++....+.+..  +.+.+++.| +++.++.    
T Consensus        51 ~~~~Le~~lA~l~g~~~--~-~~~-~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~----  121 (377)
T PRK07671         51 TRAALEELIAVLEGGHA--G-FAF-GSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT----  121 (377)
T ss_pred             HHHHHHHHHHHHhCCCc--e-EEe-CCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC----
Confidence            35688899999999864  4 444 67788887754 57799999998766544221  223344567 6555532    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCCc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQK  265 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~K  265 (430)
                           .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+.  .++++ ..|+++.|++|
T Consensus       122 -----~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p~~~-g~Divv~S~sK  195 (377)
T PRK07671        122 -----SNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSPISL-GADIVLHSATK  195 (377)
T ss_pred             -----CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCChhhh-CCeEEEecCcc
Confidence                 3566776  7889999999999999999999  78886 68999999999987443  34433 23899999999


Q ss_pred             ccc-CCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          266 NVG-PSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       266 ~~g-p~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      |+| +.+  .|+++++ +++.+.+..    +.+        ...++.+....+.+...++      -+....++..+.+.
T Consensus       196 ~l~G~~~~~~G~~v~~~~~l~~~~~~----~~~--------~~g~~~~~~~a~l~~~~l~------tl~~R~~~~~~na~  257 (377)
T PRK07671        196 YLGGHSDVVAGLVVVNSPELAEDLHF----VQN--------STGGILGPQDSWLLLRGLK------TLGIRMEEHETNSR  257 (377)
T ss_pred             cccCCccceeEEEEeCcHHHHHHHHH----HHH--------hhcCCCCHHHHHHHHcCcC------hHHHHHHHHHHHHH
Confidence            995 654  4666664 455554321    000        0113344433333332332      24456677777788


Q ss_pred             HHHHHHHccCCceec--CCCCC-----------CCccceEEEEcCCCchhH--HHHHHHHH--cCCe--------ecC--
Q 043610          342 LLYNVIDGSNGFYKC--PVEKS-----------VRSFMNVPFTLEKSDLEA--EFVKEAAK--EKMV--------QLK--  394 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~--~~~~~-----------~rs~~iv~f~~~~~~~~~--~~~~~L~~--~Gi~--------~~~--  394 (430)
                      .+.++|++.+++..+  |.-+.           .....+++|.+.  +.+.  +|+..|+-  .+.-        ..+  
T Consensus       258 ~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~--~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~  335 (377)
T PRK07671        258 AIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG--SEETANKVLERLQYFTLAESLGAVESLISIPSQ  335 (377)
T ss_pred             HHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC--CHHHHHHHHHhCCcceEccCCCCCCeEeECCCc
Confidence            888888875554322  11011           112468889883  2222  45555532  1111        111  


Q ss_pred             -CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          395 -GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       395 -g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       .+.            ..+-||+|++.    ||.+.+++-|+..+
T Consensus       336 ~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al  376 (377)
T PRK07671        336 MTHASIPADRRKELGITDGLIRISVGI----EDGEDLIEDLAQAL  376 (377)
T ss_pred             cccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHh
Confidence             110            13469999996    67777777776654

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.68  E-value=3.8e-15  Score=149.18  Aligned_cols=206  Identities=11%  Similarity=0.037  Sum_probs=142.1

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH-H-HHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA-F-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~-~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+.+++.++.+-+.+.  . +++ +||++|+..++.++++|||+|++..+.+.+... . +.++++| ++..+...   
T Consensus        65 t~~~Le~~la~le~~~~--~-v~~-sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~---  137 (395)
T PRK05967         65 TTDALCKAIDALEGSAG--T-ILV-PSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE---  137 (395)
T ss_pred             HHHHHHHHHHHHhCCCC--E-EEE-CcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC---
Confidence            34467788888877653  3 444 568999999999999999999998887776542 2 3456778 66665321   


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC--CCccccccccEEEeCCCc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC--SKPVDVTRFGVIYAGAQK  265 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G--~~~idl~~~d~~~~s~~K  265 (430)
                            +.++++  ++++||+|++.+++|+++.+.|  +|+++ +++|++++||++++.+  ..|+++ ..|+++.|.+|
T Consensus       138 ------~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~pl~~-GaDivv~S~tK  210 (395)
T PRK05967        138 ------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRPLDF-GVDISIHAATK  210 (395)
T ss_pred             ------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecChhHc-CCCEEEEeccc
Confidence                  224465  6889999999999999999999  78886 7899999999998755  345554 34899999999


Q ss_pred             cccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          266 NVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       266 ~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      +++..|   .|++..++++.+.+..       +   ..  ....+.+....+.+...|+      -+.-+.+++.+.+..
T Consensus       211 y~~Gh~d~~~G~v~~~~~~~~~l~~-------~---~~--~~G~~~~p~da~l~~rgl~------Tl~lR~~~~~~na~~  272 (395)
T PRK05967        211 YPSGHSDILLGTVSANEKCWPQLLE-------A---HG--TLGLCAGPDDTYQILRGLR------TMGIRLEHHRKSALE  272 (395)
T ss_pred             ccCCCCCeeEEEEEcCHHHHHHHHH-------H---HH--HcCCCCCHHHHHHHHcCcc------cHHHHHHHHHHHHHH
Confidence            985433   6766667766554311       0   00  1223455555444433333      345667777777888


Q ss_pred             HHHHHHccCCc
Q 043610          343 LYNVIDGSNGF  353 (430)
Q Consensus       343 l~~~l~~~~G~  353 (430)
                      +.++|++.+.+
T Consensus       273 lA~~L~~hp~v  283 (395)
T PRK05967        273 IARWLEGRPDV  283 (395)
T ss_pred             HHHHHHhCCCC
Confidence            88888875443

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.68  E-value=4.7e-15  Score=149.48  Aligned_cols=274  Identities=10%  Similarity=-0.020  Sum_probs=168.9

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.+++++|.+   +++++ +|+++|+.+++.++++|||+|++..+.+.+..  +...++..| +++.++..    
T Consensus        67 ~~~Le~~lA~l~g~~---~~l~~-~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~----  138 (394)
T PRK07050         67 SLALAQRLAEIEGGR---HALLQ-PSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL----  138 (394)
T ss_pred             HHHHHHHHHHHhCCC---eEEEe-ccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC----
Confidence            468889999999964   57765 78999999999999999999998776554432  212455667 66655431    


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                           +.++++  +++++|+|++++++|++|...|  +|.++ +++|+++++|++++.|..  ++++. .|+++.|.+|+
T Consensus       139 -----~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~G-aDi~v~S~tK~  212 (394)
T PRK07050        139 -----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFKPFEHG-VDISVQALTKY  212 (394)
T ss_pred             -----CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccCHHHcC-CeEEEEECCce
Confidence                 223455  6889999999999999998888  78886 689999999999988763  34442 37999999999


Q ss_pred             cc-CCc--cEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VG-PSG--VTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~g-p~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++ ..+  .|.++. ++++.++++.       +.   .  ...++.+.+..+.+...|+      .+..+.++..+.+..
T Consensus       213 ~~g~~~~~gG~v~~~~~~~~~~~~~-------~~---~--~~G~~~~~~~a~l~lr~l~------tl~~Rl~~~~~~a~~  274 (394)
T PRK07050        213 QSGGSDVLMGATITADAELHAKLKL-------AR---M--RLGIGVSADDCSLVLRGLP------SLQVRLAAHDRSALE  274 (394)
T ss_pred             ecCCCCeeEEEEEECCHHHHHHHHH-------HH---H--hcCCCCCHHHHHHHHcCCC------cHHHHHHHHHHHHHH
Confidence            94 443  465555 4566555421       10   0  0112333333222222222      344455555666667


Q ss_pred             HHHHHHccCCceec--C-C-C-CC--------CCccceEEEEcCCC--chhH-HHHHHHHHcCCeecCC-----------
Q 043610          343 LYNVIDGSNGFYKC--P-V-E-KS--------VRSFMNVPFTLEKS--DLEA-EFVKEAAKEKMVQLKG-----------  395 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~-~-~-~~--------~rs~~iv~f~~~~~--~~~~-~~~~~L~~~Gi~~~~g-----------  395 (430)
                      +.++|++.+++..+  + . + +.        ....++++|.+.+.  ..+. +|++.|+.-++....|           
T Consensus       275 la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~  354 (394)
T PRK07050        275 VAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDV  354 (394)
T ss_pred             HHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCcc
Confidence            77777765443321  1 0 0 00        12346788888642  1122 5777776554432111           


Q ss_pred             -CC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          396 -HR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       396 -~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       +.       ..+-||+|++.    ||++.+++-|+..+
T Consensus       355 ~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al  389 (394)
T PRK07050        355 ASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQAL  389 (394)
T ss_pred             cccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHH
Confidence             10       12469999997    45555555554443

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.68  E-value=4e-15  Score=151.21  Aligned_cols=287  Identities=11%  Similarity=0.051  Sum_probs=170.2

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH-HH-HHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA-FK-EAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~-~~-~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.|+++.|.+.   .+++ +||++|+..++.+++++||+|++....+.+... .. .....| ++..++      
T Consensus        60 ~~~Le~~lA~l~g~~~---~l~~-ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d------  129 (425)
T PRK06084         60 NDVLEQRVAALEGGVG---ALAV-ASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA------  129 (425)
T ss_pred             HHHHHHHHHHHhCCCc---eeEe-hhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC------
Confidence            4578899999999753   3444 688999999999999999999877655443221 11 111234 332222      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCccc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNV  267 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~  267 (430)
                         ..|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+...-.++ ..|+++.|++||+
T Consensus       130 ---~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l  206 (425)
T PRK06084        130 ---HDDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYI  206 (425)
T ss_pred             ---CCCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcc
Confidence               23667776  6789999999999999999999  78886 68999999999998765432222 2489999999999


Q ss_pred             cCCc--cEEEEEc-HHH--Hh---c---cCCCCCccccccchh---------h-----cCCCCCCccHHHHHHHHHHHHH
Q 043610          268 GPSG--VTIVIVR-KDL--LG---N---AQDKTPLMLDYKIHD---------E-----NNSLYNTPPCYCIYMCGLVFEY  322 (430)
Q Consensus       268 gp~G--~g~l~v~-~~~--~~---~---~~~~~p~~~~~~~~~---------~-----~~~~~~T~~~~~~~a~~~al~~  322 (430)
                      |..|  +|.+++. +..  .+   .   .....|.|++.....         +     ........+....+   ..++-
T Consensus       207 ~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~---l~lrg  283 (425)
T PRK06084        207 GGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAF---LILQG  283 (425)
T ss_pred             cccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHH---HHHcC
Confidence            6434  5655653 321  11   1   111122232210000         0     00011223333222   22222


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CCCCCC-----------C-ccceEEEEcCCCchhH--HHHHHHH
Q 043610          323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PVEKSV-----------R-SFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~~~~~-----------r-s~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                      +   ..++.+.++..+.+..+.+.|++.+++..+  |.-+++           . ..++++|.+.+ +.+.  +|++.|+
T Consensus       284 l---~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~-~~~~~~~f~~~l~  359 (425)
T PRK06084        284 L---ETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKG-GQAAGARFIDALK  359 (425)
T ss_pred             c---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecC-CHHHHHHHHHhCC
Confidence            2   246778888888889999999986554322  211110           1 24589999874 2222  4666554


Q ss_pred             HcCCe----------ecC---CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          387 KEKMV----------QLK---GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       387 ~~Gi~----------~~~---g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      --.+.          ..+   .+.            ..+.||+|++.    ||.+.|++-|+..++
T Consensus       360 l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----Ed~~dLi~dl~~Al~  421 (425)
T PRK06084        360 LVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI----EHIDDIIADLAQALD  421 (425)
T ss_pred             cceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence            21111          101   111            13469999996    666666666666554

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.67  E-value=7e-15  Score=149.66  Aligned_cols=149  Identities=15%  Similarity=0.025  Sum_probs=111.7

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.++++.|.+.   .+++ +||+.|+.+++.++++|||+|++....+.+..  +...+++.| +++.++.     
T Consensus        65 ~~~le~~lA~l~g~~~---al~~-~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~-----  135 (427)
T PRK05994         65 NAVLEERVAALEGGTA---ALAV-ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA-----  135 (427)
T ss_pred             HHHHHHHHHHHhCCCc---EEEE-cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC-----
Confidence            4578899999999863   3444 78999999999999999999998776654432  222345667 6555432     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCccc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNV  267 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~  267 (430)
                          .|+++++  +++++++|++.+++|++|.+.|  +|.++ +++|+++++|++++.+.....++ ..|+++.|++|++
T Consensus       136 ----~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~l  211 (427)
T PRK05994        136 ----DDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFL  211 (427)
T ss_pred             ----CCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCcccc
Confidence                2556666  7889999999999999999999  78886 78999999999998665322222 3489999999999


Q ss_pred             cCCc--cEEEEEc
Q 043610          268 GPSG--VTIVIVR  278 (430)
Q Consensus       268 gp~G--~g~l~v~  278 (430)
                      |.+|  +|.+++.
T Consensus       212 gg~~~~~gG~v~~  224 (427)
T PRK05994        212 GGHGNSMGGIIVD  224 (427)
T ss_pred             CCCCCcEEEEEEe
Confidence            7444  6666663

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.67  E-value=4.3e-15  Score=149.06  Aligned_cols=275  Identities=15%  Similarity=0.029  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.++++.|.+.  . +++ +||+.|+.+++ ++++|||+|++..+.+.+..  +...+++.| +++.++      
T Consensus        52 ~~~Le~~la~l~g~~~--a-l~~-~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd------  120 (380)
T PRK06176         52 RFALEELIADLEGGVK--G-FAF-ASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIID------  120 (380)
T ss_pred             HHHHHHHHHHHhCCCC--E-EEE-CCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcC------
Confidence            4578899999999764  3 444 67889998765 56799999998665543321  223345566 544332      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K~  266 (430)
                         ..|+++++  +++++++|++.+++|++|.+.|  +|.++ +++|+++++|++++.+..  |+++ ..|++++|++|+
T Consensus       121 ---~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~~~-gaDivv~S~tK~  196 (380)
T PRK06176        121 ---TSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLL-GADIVVHSGTKY  196 (380)
T ss_pred             ---CCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCcccc-CCCEEEecCcee
Confidence               23566776  6889999999999999999999  78886 789999999999886543  4433 348999999999


Q ss_pred             cc-CCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VG-PSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~g-p~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++ +..  .|+++.++ ++.+++..    +.      ..  ...+.+....+.+...++      .+..+.++..+.+..
T Consensus       197 l~g~~d~~gG~vv~~~~~~~~~~~~----~~------~~--~G~~~~~~~~~l~~~gl~------tl~~R~~~~~~~a~~  258 (380)
T PRK06176        197 LGGHSDVVAGLVTTNNEALAQEIAF----FQ------NA--IGGVLGPQDSWLLQRGIK------TLGLRMEAHQKNALC  258 (380)
T ss_pred             ccCCccceeeEEEecHHHHHHHHHH----HH------HH--hcCCCCHHHHHHHHhccC------cHHHHHHHHHHHHHH
Confidence            95 543  46666654 44343211    00      00  011222222222222221      334555556666677


Q ss_pred             HHHHHHccCCceec--CC--C-CC--------CCccceEEEEcCCCchhHHHHHHHHHcCCe----------ecC---CC
Q 043610          343 LYNVIDGSNGFYKC--PV--E-KS--------VRSFMNVPFTLEKSDLEAEFVKEAAKEKMV----------QLK---GH  396 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~~--~-~~--------~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~----------~~~---g~  396 (430)
                      +.+.|++.+.+.-+  +.  . +.        .....+++|.+.+...-.+|++.|+--.+.          ..+   .+
T Consensus       259 la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~  338 (380)
T PRK06176        259 VAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGESLGGVESLVGIPAFMTH  338 (380)
T ss_pred             HHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEccCCCCCCceeeCCccccc
Confidence            77777764433211  11  0 10        013467889986411111455544321111          111   11


Q ss_pred             C------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          397 R------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       397 ~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .            ..+-||+|++.    ||++.|++-|+..+++
T Consensus       339 ~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~~  378 (380)
T PRK06176        339 ACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFAK  378 (380)
T ss_pred             ccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence            1            13469999996    6777777777776654

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.67  E-value=1.9e-14  Score=155.38  Aligned_cols=300  Identities=11%  Similarity=0.047  Sum_probs=187.2

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-C-------CCCCcEEEEeCChhHHHHHHHHHHhC-
Q 043610          111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-C-------TPNDPVDYIVTGSWGDKAFKEAQKFC-  181 (430)
Q Consensus       111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~-------~~gd~vl~~~~g~~~~~~~~~a~~~g-  181 (430)
                      +...+++.+...+|++++|.+.   +-+..++++.|..+.++.+ .       ...+.|++...-+...+.  .++..| 
T Consensus       526 qG~lq~i~elq~~l~eltGmd~---~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--sa~~~G~  600 (939)
T TIGR00461       526 EGYQELIAQLEKWLCSITGFDA---ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--SAAMAGM  600 (939)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCC---cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--HHHHCCC
Confidence            3478999999999999999984   3344567776665433332 1       112345544443422221  255668 


Q ss_pred             CceEEecCCCCcCCCCCCccccc--cC---CCccEEEEeecCCCccccCC---CCccc-cCCCcEEEEeccCcCCCCcc-
Q 043610          182 NPQVIWSGKAEKYTKIPNFDALE--QN---PDAKYLHICANETIHGVEFK---EYPSA-KNSTGILVADMSSNFCSKPV-  251 (430)
Q Consensus       182 ~~~~v~~~~~~~~g~~~d~~~l~--i~---~~~~lv~i~~~~t~tG~~~p---ei~~~-~~~g~~lvvD~a~s~G~~~i-  251 (430)
                      ++++++.++   .| .+|+++|+  ++   +++++|++++++| +|.+.|   +|+++ +++|+++++|+++..+...+ 
T Consensus       601 ~Vv~V~~d~---~G-~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~  675 (939)
T TIGR00461       601 QVVPVNCDQ---DG-NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLT  675 (939)
T ss_pred             EEEEeccCC---CC-CcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCC
Confidence            888887642   45 57999987  55   5899999999998 688877   67776 78899999999997654432 


Q ss_pred             ccccc--cEEEeCCCcccc-CCc-----cEEEEEcHHHHhccCCCCCc--cccccchhhc--CCCC--CCccHHHHHHHH
Q 043610          252 DVTRF--GVIYAGAQKNVG-PSG-----VTIVIVRKDLLGNAQDKTPL--MLDYKIHDEN--NSLY--NTPPCYCIYMCG  317 (430)
Q Consensus       252 dl~~~--d~~~~s~~K~~g-p~G-----~g~l~v~~~~~~~~~~~~p~--~~~~~~~~~~--~~~~--~T~~~~~~~a~~  317 (430)
                      +..++  |+++++.||+++ |.|     +|++++++++...+.. ...  ..+... .+.  +...  .+-+......+.
T Consensus       676 ~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg-~~v~~t~d~~g-req~Iga~s~~~~g~a~~~l~a~  753 (939)
T TIGR00461       676 SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPK-HDVVSMITGIG-GSKSIGSVSAAPYGSASILPISW  753 (939)
T ss_pred             CccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCC-CcccccccCCC-CccccccccccccCcHHHHHHHH
Confidence            33444  899999999774 655     6999999875433211 100  001100 010  1111  122222333344


Q ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC----chhH-HHHHHHHHcCCee
Q 043610          318 LVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS----DLEA-EFVKEAAKEKMVQ  392 (430)
Q Consensus       318 ~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~----~~~~-~~~~~L~~~Gi~~  392 (430)
                      ..|..+-. .|+.++.+....+++++.++|.+  +++++-..+......-++|.+++.    +... ++.++|.+.|+..
T Consensus       754 ~yi~~lG~-~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~ha  830 (939)
T TIGR00461       754 MYIKMMGN-EGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHA  830 (939)
T ss_pred             HHHHHHCH-HHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeec
Confidence            45555543 47889999999999999999986  555542111111123466666521    2333 7999999999974


Q ss_pred             cC-CCCCCCe--eEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          393 LK-GHRSVGG--MRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       393 ~~-g~~~~g~--iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .. ++...+.  ||.+-  ..+.+|+|+++++|..+.+
T Consensus       831 pt~~~pv~g~lmiepTE--~eskeelD~f~~al~~I~~  866 (939)
T TIGR00461       831 PTLSFPVPGTLMVEPTE--SESLEELDRFCDAMIAIKE  866 (939)
T ss_pred             cccCCccCCeEEEEeec--cCCHHHHHHHHHHHHHHHH
Confidence            22 1112333  45544  6689999999999987754

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.66  E-value=4.8e-15  Score=141.79  Aligned_cols=305  Identities=16%  Similarity=0.076  Sum_probs=185.8

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCC
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND  159 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd  159 (430)
                      ...+.++++|.+.-    ..+.++|.    ..   +..+++++.+++++|. .  .++|+ .|||.++..++.+.++||+
T Consensus        11 g~~~~m~eam~~a~----~~~~~~YG----~D---~~~~~~e~~~ae~~g~-~--a~~Fv-~sGT~aN~lal~~~~~~~~   75 (342)
T COG2008          11 GPTPEMREALAAAN----AVGDDVYG----ED---PTTNALEQRIAELFGK-E--AALFV-PSGTQANQLALAAHCQPGE   75 (342)
T ss_pred             CCCHHHHHHHHhcc----ccCCCCCC----CC---HHHHHHHHHHHHHhCC-c--eEEEe-cCccHHHHHHHHHhcCCCC
Confidence            34568888887642    12333221    22   3456888999999999 3  68887 5789999999999999999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc--cC-------CCccEEEEeecCCCccccCC--CC
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QN-------PDAKYLHICANETIHGVEFK--EY  228 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~-------~~~~lv~i~~~~t~tG~~~p--ei  228 (430)
                      .|++-...|....-.-..+.++....++..+. +.| .+++++++  +.       +...++.+++ .|.-|+++|  +|
T Consensus        76 ~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g-~~G-klt~e~v~~~i~~~d~~~~~~~~~~~e~~-~te~GtVy~l~el  152 (342)
T COG2008          76 SVICHETAHIYTDECGAPEFFGGGQKLPIVPG-ADG-KLTPEDVEAAIRPDDIHHAPTPLAVLENT-ATEGGTVYPLDEL  152 (342)
T ss_pred             eEEEeccccceecccCcHHHHcCCceeccCCC-CCC-CcCHHHHHHhhcCCCcccCCCceEEEeec-cCCCceecCHHHH
Confidence            99876555432110011223332223332221 245 57888876  32       1234444443 447799999  55


Q ss_pred             cc---c-cCCCcEEEEecc---CcCCCCccccccc----cEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCcccccc
Q 043610          229 PS---A-KNSTGILVADMS---SNFCSKPVDVTRF----GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYK  296 (430)
Q Consensus       229 ~~---~-~~~g~~lvvD~a---~s~G~~~idl~~~----d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~  296 (430)
                      .+   + +++|+.+++||+   .+.-...++..+|    |+++++++|.+| |.| ++++.+++++++.+.+.       
T Consensus       153 ~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~g-Aiv~gn~~~~~~a~~~r-------  224 (342)
T COG2008         153 EAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVG-AIVFGNRDFAKRARRWR-------  224 (342)
T ss_pred             HHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceee-eEEEcCHHHHHHHHHHH-------
Confidence            44   3 699999999996   2222222444444    899999999998 555 89999999988743211       


Q ss_pred             chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc
Q 043610          297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       297 ~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~  376 (430)
                      .  ..|   |-..-..++++  +.....+..-+.....|-.+++.+|.+.+.+.+|+.+.. +  ..+++ +.+.++.  
T Consensus       225 K--~~G---gl~~k~r~laA--~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~-~--~~tN~-vf~~l~~--  291 (342)
T COG2008         225 K--RAG---GLMRKARFLAA--QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAF-P--VETNM-VFVRLPE--  291 (342)
T ss_pred             H--Hhc---ccHhhhhHHHH--HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceecc-C--CcccE-EEEECCh--
Confidence            0  011   11122222222  222222222244555666678899999999767998864 1  23443 3345553  


Q ss_pred             hhHHHHHHHHHcCCeecCCCC--CC-CeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          377 LEAEFVKEAAKEKMVQLKGHR--SV-GGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       377 ~~~~~~~~L~~~Gi~~~~g~~--~~-g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                         ...+.|...|+....|..  .. ..+|+..++.++++||++++..++.++
T Consensus       292 ---~~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         292 ---SAIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             ---HHHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence               223555555555433221  11 259999999999999999999999875

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.66  E-value=7.4e-15  Score=146.45  Aligned_cols=271  Identities=13%  Similarity=0.071  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHHHHHHhCCceEEecCCCCcCC
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFKEAQKFCNPQVIWSGKAEKYT  195 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~~a~~~g~~~~v~~~~~~~~g  195 (430)
                      .+++++.++++.|..   .++++ +|+++|+.+++ .++++||+|++....+-+. .+.......+.+.   .    .+ 
T Consensus        56 ~~~le~~lA~leg~~---~~v~~-~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~---~----~~-  122 (364)
T PRK07269         56 RAKLEETLAAIESAD---YALAT-SSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFH---F----TY-  122 (364)
T ss_pred             HHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEE---E----Ee-
Confidence            447789999999865   56665 78999999887 4679999999765443222 2222221222111   1    02 


Q ss_pred             CCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCCcccc
Q 043610          196 KIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQKNVG  268 (430)
Q Consensus       196 ~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~K~~g  268 (430)
                       ..|+++++  ++++||+|++++++||+|.+.|  +|.++ +++|+++++|++++.+.  .|++. ..|+++.|++|+++
T Consensus       123 -~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~pl~~-gaDivv~S~tK~l~  200 (364)
T PRK07269        123 -ANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRPIEL-GADIVLHSATKYLS  200 (364)
T ss_pred             -cCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCchhh-CCcEEEecCceecc
Confidence             24667776  7899999999999999999999  78886 78999999999965443  33322 23899999999995


Q ss_pred             -CCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          269 -PSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       269 -p~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                       +..  .|+++.+ +++.+++..    +..        ....+.+....+.+...|+      -++.+.++..+.+.++.
T Consensus       201 g~~d~~gG~v~~~~~~l~~~~~~----~~~--------~~G~~~s~~~a~l~~~~L~------tL~~r~~~~~~na~~~a  262 (364)
T PRK07269        201 GHNDVLAGVVVTNDLELYEKLFY----NLN--------TTGAVLSPFDSYLLMRGLK------TLSLRMERSTANAQEVV  262 (364)
T ss_pred             CCCcccceEEEeCcHHHHHHHHH----HHH--------HhCCCCCHHHHHHHHcCCC------cHHHHHHHHHHHHHHHH
Confidence             433  3666664 455554321    110        0112334433333333332      36778888899999999


Q ss_pred             HHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc----------CCeecCCC---C------------CC
Q 043610          345 NVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE----------KMVQLKGH---R------------SV  399 (430)
Q Consensus       345 ~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~----------Gi~~~~g~---~------------~~  399 (430)
                      ++|++.+++..+- -|. . .++++|.+.+.....+|+..|+--          +++..+..   .            ..
T Consensus       263 ~~L~~~p~v~~v~-ypg-~-gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~  339 (364)
T PRK07269        263 AFLKKSPAVKEVL-YTG-K-GGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTD  339 (364)
T ss_pred             HHHHhCCCccEEe-CCC-c-CcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCC
Confidence            9998755543221 121 2 367888885311111455544321          11222211   0            13


Q ss_pred             CeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          400 GGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       400 g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +-||+|++.    ||++.+++-|++.++
T Consensus       340 ~liRlsvGl----E~~~dli~dl~~al~  363 (364)
T PRK07269        340 DLLRLSIGI----EDARDLIADLKQALE  363 (364)
T ss_pred             CeEEEEecc----CCHHHHHHHHHHHhc
Confidence            469999996    677777777776553

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.66  E-value=2.5e-14  Score=132.06  Aligned_cols=323  Identities=15%  Similarity=0.170  Sum_probs=213.7

Q ss_pred             cCCCCCceeecCCC---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           65 SGQEDRVFNFAAGP---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        65 ~~~~~~~~l~~~gp---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      .-..+.++||.+.-   -.-.|+++++.+..++.+.....|+--    --...++...+++.+|++.+..+  -++.  .
T Consensus        63 ~G~~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrf----IcGtq~iHk~LE~kiAqfh~rED--~ily--p  134 (417)
T KOG1359|consen   63 KGSDKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRF----ICGTQDIHKLLESKIAQFHGRED--TILY--P  134 (417)
T ss_pred             eccccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeE----EecchHHHHHHHHHHHHHhCCCc--eEEe--c
Confidence            34445688887744   235668999999988775322222111    12335677788999999999875  4444  4


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHHHHHHhCCceEEecCCCCcCCCCCCccc-c-c-cCCCccEEEEeec
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFKEAQKFCNPQVIWSGKAEKYTKIPNFDA-L-E-QNPDAKYLHICAN  217 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~-l-~-i~~~~~lv~i~~~  217 (430)
                      +...|+..++.+++.|.|.|+.=+-.+-+. .-+..+++++++.            ..+++. + + -.-+.|+|.-..+
T Consensus       135 scfdANag~feail~pedAvfSDeLNhASIIdGirLckry~h~d------------v~~l~~~l~~a~k~r~klv~TDg~  202 (417)
T KOG1359|consen  135 SCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKRYRHVD------------VFDLEHCLISACKMRLKLVVTDGV  202 (417)
T ss_pred             cccccchHHHHHhcChhhhhhccccccchhhhhhHHHhhhccch------------hHHHHHHHHHhhhheEEEEEecce
Confidence            678999999999888888765311112111 1123455554321            112221 1 1 1235677777777


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCCC---------ccc-cccccEEEeCCCcccc-CCccEEEEEcHHHHh
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK---------PVD-VTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLG  283 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~---------~id-l~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~  283 (430)
                      -+..|-+.|  +|+++ +++|+++++|+.|+-|..         .+. +.+.|++.++..|.+| -.| ||...++.+++
T Consensus       203 FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttgp~~li~  281 (417)
T KOG1359|consen  203 FSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTGPKPLIS  281 (417)
T ss_pred             eccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCccCChhHHH
Confidence            888999999  89998 699999999999875432         233 3456899999999996 778 99999999887


Q ss_pred             ccCCC-CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          284 NAQDK-TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       284 ~~~~~-~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      .++.. .|+.|.           ++.|...+-...++++.+.   .-.....+.+...+++++..+. .|+++...    
T Consensus       282 llrqr~RpylFS-----------nslppavV~~a~ka~dllm---~s~~~i~~~~a~~qrfr~~me~-aGftIsg~----  342 (417)
T KOG1359|consen  282 LLRQRSRPYLFS-----------NSLPPAVVGMAAKAYDLLM---VSSKEIQSRQANTQRFREFMEA-AGFTISGA----  342 (417)
T ss_pred             HHHhcCCceeec-----------CCCChhhhhhhHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHh-cCceecCC----
Confidence            76542 343332           3445444455566777654   2356677778888899999885 79988642    


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecC---CCCCCC--eeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---GHRSVG--GMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g~~~~g--~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       +..|.++-+.+..+..++.+.|.+.||.+..   .....|  .||+.+...+|+||||++++++.++.+-
T Consensus       343 -~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~  412 (417)
T KOG1359|consen  343 -SHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF  412 (417)
T ss_pred             -CCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence             2234556665533333678888889998642   112223  6999999999999999999999987653

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.65  E-value=5e-14  Score=142.72  Aligned_cols=316  Identities=13%  Similarity=0.106  Sum_probs=192.6

Q ss_pred             CCCCceeecCCCC--C---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPA--N---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~--~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+++..|-.  .   ..|.|++++.+.+.+... +.      ..  -......++.+.|+++++.+   .++++ +
T Consensus        35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~-~~------~~--~~~~~~~~l~~~l~~~~~~~---~~~~~-~  101 (401)
T TIGR01885        35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTL-SS------RA--FYNDVFGEFAEYVTKLFGYD---KVLPM-N  101 (401)
T ss_pred             CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccc-cc------cc--cCCHHHHHHHHHHHhhcCCC---EEEEe-C
Confidence            3445556655432  2   379999999998865321 10      00  02245567888899998753   56665 7


Q ss_pred             cHHHHHHHHHhhc---------CCCCCcEEEEeCChhHHH-HHHHHHHhCCc-----------eEEecCCCCcCCCCCCc
Q 043610          142 GATTQFAAVPLNL---------CTPNDPVDYIVTGSWGDK-AFKEAQKFCNP-----------QVIWSGKAEKYTKIPNF  200 (430)
Q Consensus       142 gaT~a~~~~~~sl---------~~~gd~vl~~~~g~~~~~-~~~~a~~~g~~-----------~~v~~~~~~~~g~~~d~  200 (430)
                      ||++|++.++...         ..+|+.+++...+.|... +.... ..+..           .++..    ++   .|+
T Consensus       102 SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~---~d~  173 (401)
T TIGR01885       102 TGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAIS-MSTDPDSRTNFGPYVPGFKKI----PY---NNL  173 (401)
T ss_pred             ccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHh-CcCCcccccccCCCCCCceEe----CC---CCH
Confidence            8999999887763         123455555554443211 11111 11110           01111    11   245


Q ss_pred             cccc--c---CCCccEEEEeecCCCccccCC-C--Cc---cc-cCCCcEEEEeccCc-CC--CCc--cccccc--cEEEe
Q 043610          201 DALE--Q---NPDAKYLHICANETIHGVEFK-E--YP---SA-KNSTGILVADMSSN-FC--SKP--VDVTRF--GVIYA  261 (430)
Q Consensus       201 ~~l~--i---~~~~~lv~i~~~~t~tG~~~p-e--i~---~~-~~~g~~lvvD~a~s-~G--~~~--idl~~~--d~~~~  261 (430)
                      ++++  +   .+++.+|++-.+.+++|...| +  +.   ++ +++|+++++|++|. +|  ...  .+...+  |+++.
T Consensus       174 ~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~  253 (401)
T TIGR01885       174 EALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLL  253 (401)
T ss_pred             HHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEe
Confidence            5665  3   245677777777888899987 2  44   43 58999999999964 43  122  122222  56654


Q ss_pred             CCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610          262 GAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK  339 (430)
Q Consensus       262 s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l  339 (430)
                        .|.++-.|  +|+++.++++++.+...   ..        ..+ .+.+...+.++.++|+.+.+ .   .+.++.+++
T Consensus       254 --gK~l~~g~~~ig~v~~~~~i~~~~~~~---~~--------~~t-~~~~p~~~~aa~a~L~~i~~-~---~l~~~~~~~  315 (401)
T TIGR01885       254 --GKALSGGVYPVSAVLADDDVMLTIKPG---EH--------GST-YGGNPLACAVAVAALEVLEE-E---KLAENAEKL  315 (401)
T ss_pred             --eccccCCCCCcEEEEEcHHHHhhccCC---CC--------CCC-CCCCHHHHHHHHHHHHHHHh-c---cHHHHHHHH
Confidence              49995322  78888898887654321   10        112 23456778888889987763 2   456788888


Q ss_pred             HHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc--hh-HHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610          340 AELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD--LE-AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       340 ~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~--~~-~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~  416 (430)
                      .+++++.|++ .+..++. +..... .++.+.+++..  .. .++.++|.++||.+.+..  .+.+||+++..++++||+
T Consensus       316 ~~~~~~~L~~-l~~~~~~-~~~g~g-~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~~lRi~p~l~~t~~~i~  390 (401)
T TIGR01885       316 GEIFRDQLKK-LPKPIIT-EVRGRG-LLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTH--GNIIRLAPPLVITEEQLD  390 (401)
T ss_pred             HHHHHHHHHh-ccCCcee-EEeecC-eeEEEEeccCcchhHHHHHHHHHHhCCEEEEecC--CCEEEEeCCccCCHHHHH
Confidence            9999999987 4433321 111123 34444554321  12 378999999999986532  357999999899999999


Q ss_pred             HHHHHHHHHH
Q 043610          417 KLVAFMKDFQ  426 (430)
Q Consensus       417 ~ll~~L~~~~  426 (430)
                      +++++|++++
T Consensus       391 ~~l~~l~~~l  400 (401)
T TIGR01885       391 EGLEIIKKVI  400 (401)
T ss_pred             HHHHHHHHHh
Confidence            9999999875

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.65  E-value=4.2e-14  Score=141.99  Aligned_cols=320  Identities=13%  Similarity=0.062  Sum_probs=186.6

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+++..|-     +--+|.|++++.+.+.+....  +.  ..  .   .+..+++.+.+++..+.  + .++++ +|
T Consensus        28 G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~--~~--~---~~~~~~la~~l~~~~~~--~-~~~~~-~s   94 (377)
T PRK02936         28 GKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHV--SN--LF--T---NSLQEEVASLLAENSAG--D-LVFFC-NS   94 (377)
T ss_pred             CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcccc--cc--cc--C---CHHHHHHHHHHHhcCCC--C-EEEEe-CC
Confidence            34455555543     345789999999988753211  10  00  1   12333444555544432  2 56665 78


Q ss_pred             HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhCC-ce---EEecCCCCcCCCCCCccccc--cCCCccEEEE
Q 043610          143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFCN-PQ---VIWSGKAEKYTKIPNFDALE--QNPDAKYLHI  214 (430)
Q Consensus       143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g~-~~---~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i  214 (430)
                      |++|++.++...  ...+++|++++.++.+.-..... ..+. ..   ..+...+..+-...|+++++  +.+++++|++
T Consensus        95 G~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~  173 (377)
T PRK02936         95 GAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMS-ATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVML  173 (377)
T ss_pred             cHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhh-ccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEE
Confidence            999999887743  22335677777666543211111 1121 10   00110000000012556676  6778999999


Q ss_pred             eecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC--Cccccccc----cEEEeCCCccccCCc--cEEEEEc
Q 043610          215 CANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS--KPVDVTRF----GVIYAGAQKNVGPSG--VTIVIVR  278 (430)
Q Consensus       215 ~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~--~~idl~~~----d~~~~s~~K~~gp~G--~g~l~v~  278 (430)
                      ..+.+..|...+      +|.++ +++|+++++|++|. +|.  .++....+    |+  .+++|.+| .|  +|+++.+
T Consensus       174 e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di--~t~sK~l~-~G~~ig~v~~~  250 (377)
T PRK02936        174 EVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDI--VTVAKGLG-NGIPVGAMIGK  250 (377)
T ss_pred             ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcE--EEEccccc-CCCccEEEEEc
Confidence            888888887743      34454 58999999999975 332  12222112    44  36899998 46  7889888


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-CceecC
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYKCP  357 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~~~  357 (430)
                      +++.+......           ...+ ++.|...+.++.++|+.+...    ...++.+++.+++++.|.+.. ++..+.
T Consensus       251 ~~~~~~~~~~~-----------~~~t-~~~~~~~~aaa~a~l~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~  314 (377)
T PRK02936        251 KELGTAFGPGS-----------HGST-FGGNPLAMAAAKEVLQVIKQP----SFLEEVQEKGEYFLQKLQEELEHLECVK  314 (377)
T ss_pred             HHHHhhccCCC-----------CCCC-CCCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence            88876542210           1112 245777888899999876432    344555666666666666421 222211


Q ss_pred             CCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          358 VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       358 ~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       .-...+ .++.+.+++ . ..++.+.|.++||.+.++.  .+.+||++....++++++++++.|++++
T Consensus       315 -~v~~~g-~~~~i~~~~-~-~~~~~~~l~~~gv~v~~~g--~~~lRi~p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        315 -NIRGKG-LMIGIECTE-E-VAPVIEQLREEGLLVLSAG--PNVIRLLPPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             -eEeecc-eEEEEEecc-h-HHHHHHHHHHCCeEEecCC--CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence             000122 345566654 2 3368888999999987642  3579999988889999999999998753

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.64  E-value=5e-14  Score=143.71  Aligned_cols=292  Identities=15%  Similarity=0.147  Sum_probs=179.0

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc---------CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEE
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL---------CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVI  186 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl---------~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v  186 (430)
                      .++.++.+++++|.+   +++++ +|+|+|+..++..+         ++|||+|++....+.+..  ......| +++.+
T Consensus        65 ~~~fe~~lA~~~g~~---~~v~~-~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~--~~v~~~G~~pv~v  138 (438)
T PRK15407         65 NDAFEKKLAEFLGVR---YALLV-NSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTV--NPIIQNGLVPVFV  138 (438)
T ss_pred             HHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHH--HHHHHcCCEEEEE
Confidence            457889999999985   46665 78999999887765         478999998776655432  2344567 77777


Q ss_pred             ecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc--cccc-cE
Q 043610          187 WSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD--VTRF-GV  258 (430)
Q Consensus       187 ~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id--l~~~-d~  258 (430)
                      +.... .+  .+|++.++  +++++++|+++|.   .|...+  +|.++ +++|+++++|++|++|+..-+  +..+ |+
T Consensus       139 dvd~~-~~--~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~  212 (438)
T PRK15407        139 DVELP-TY--NIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDI  212 (438)
T ss_pred             ecCCC-cC--CcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCce
Confidence            66421 12  46888887  7889999999874   577667  67776 689999999999999987533  3333 45


Q ss_pred             EEeCC--Ccccc-CCccEEEEEcHHHHhc-cCCCCCccccccch-------------------------hhcC---CCCC
Q 043610          259 IYAGA--QKNVG-PSGVTIVIVRKDLLGN-AQDKTPLMLDYKIH-------------------------DENN---SLYN  306 (430)
Q Consensus       259 ~~~s~--~K~~g-p~G~g~l~v~~~~~~~-~~~~~p~~~~~~~~-------------------------~~~~---~~~~  306 (430)
                      .++|+  .|.+. -.| |+++.+++.+.. +..    +.+++..                         .+..   ...|
T Consensus       213 ~~fSf~~~k~~~~geG-G~l~t~d~~l~~~~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  287 (438)
T PRK15407        213 ATLSFYPAHHITMGEG-GAVFTNDPLLKKIIES----FRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLG  287 (438)
T ss_pred             EEEeCCCCCCccccCc-eEEEECCHHHHHHHHH----HHHhCcccccccccccccccccccccccccccccccccccccc
Confidence            55554  46563 446 888887654432 211    0001000                         0000   0011


Q ss_pred             CccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-CC-CCCccceEEEEcCCC-chh-HHHH
Q 043610          307 TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EK-SVRSFMNVPFTLEKS-DLE-AEFV  382 (430)
Q Consensus       307 T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~-~~rs~~iv~f~~~~~-~~~-~~~~  382 (430)
                      .---..-+.++.++..+.   -+++..++.++.++++.+.|.+..|....+. .+ ...+...+++.+++. +.+ .+++
T Consensus       288 ~n~rmsel~AAig~~qL~---~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~  364 (438)
T PRK15407        288 YNLKITDMQAAIGLAQLE---KLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELV  364 (438)
T ss_pred             cccCccHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHH
Confidence            000011122233334343   3678888888888999999986444322221 11 122223445555431 222 3799


Q ss_pred             HHHHHcCCeecCCC---------------C-C----------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          383 KEAAKEKMVQLKGH---------------R-S----------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       383 ~~L~~~Gi~~~~g~---------------~-~----------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.|.++||.....+               . .          ...+-+-++...+++|+++++++|+++++.
T Consensus       365 ~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~~  436 (438)
T PRK15407        365 KYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFGL  436 (438)
T ss_pred             HHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence            99999998642111               0 0          113555566678999999999999998763

>PRK08637 hypothetical protein; Provisional

Probab=99.64  E-value=2.4e-14  Score=144.36  Aligned_cols=272  Identities=12%  Similarity=-0.028  Sum_probs=164.6

Q ss_pred             EEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----C
Q 043610          135 SVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----P  207 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~  207 (430)
                      +|++ ++|+++++..++..+++|||+|++..+.+..+. .......| +++.++...+ ++  .+|+++++  ++    +
T Consensus        71 ~I~i-t~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~-~~~~~~~g~~vv~v~~~~~-~~--~~d~~~l~~~~~~~~~~  145 (388)
T PRK08637         71 LPIV-TNALTHGLSLVADLFVDQGDTVLLPDHNWGNYK-LTFNTRRGAEIVTYPIFDE-DG--GFDTDALKEALQAAYNK  145 (388)
T ss_pred             eeeE-ccchHHHHHHHHHHhcCCCCEEEEcCCCCccHH-HHHHHhcCCEEEEecccCC-CC--cCCHHHHHHHHHhhccC
Confidence            5555 588999999999998899999998777655432 11123457 7777776321 23  36888876  43    4


Q ss_pred             CccEEEEeecCCCccccCC--C---Cccc-c-----CCCcEEEEeccCc-C--CCCc-cc----c-cccc-E---EEeCC
Q 043610          208 DAKYLHICANETIHGVEFK--E---YPSA-K-----NSTGILVADMSSN-F--CSKP-VD----V-TRFG-V---IYAGA  263 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~~~p--e---i~~~-~-----~~g~~lvvD~a~s-~--G~~~-id----l-~~~d-~---~~~s~  263 (430)
                      ..+++++++++||||..++  +   |.++ +     +++++++.|+++. +  ...+ ..    + +..+ +   .+.|+
T Consensus       146 ~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~  225 (388)
T PRK08637        146 GKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGA  225 (388)
T ss_pred             CCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccc
Confidence            5566788889999999999  3   4442 2     2899999999864 2  2111 11    1 1122 3   23599


Q ss_pred             CccccCCc--cEEEEEc------HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610          264 QKNVGPSG--VTIVIVR------KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM  335 (430)
Q Consensus       264 ~K~~gp~G--~g~l~v~------~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~  335 (430)
                      +|.++.+|  +|++++.      +++++.+.......        ........|...+.++..+|+.-.-...+....++
T Consensus       226 SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~  297 (388)
T PRK08637        226 TKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGL--------IRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQI  297 (388)
T ss_pred             cccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHH--------hhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99998888  8998864      45554432100000        00111245666777777777420000012344455


Q ss_pred             HHHHHHHHHHHHHccC---CceecCCCCCCCccceEEEEcCCCchh-HHHHHHHH-HcCCeecCCCCCCCeeEEeecCCC
Q 043610          336 NRKKAELLYNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEKSDLE-AEFVKEAA-KEKMVQLKGHRSVGGMRASIYNAM  410 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~~~~~-~~~~~~L~-~~Gi~~~~g~~~~g~iRis~~~~~  410 (430)
                      +++..+.+.+.|.+..   ++.+.+  +  .+...+.+.+++  .+ .+|+++|. ++||.+...  ..+++||+++. .
T Consensus       298 ~~~r~~~~~~~l~~~~~~~~~~~~~--~--~~g~~~~~~l~~--~~~~~l~~~l~~~~gv~~~~~--~~~~iRi~~~~-~  368 (388)
T PRK08637        298 LKERYEKTKEVLYDGKYDDAWQAYP--F--NSGYFMCLKLKG--VDAEELRVHLLEKYGIGTIAL--NETDLRIAFSC-V  368 (388)
T ss_pred             HHHHHHHHHHHHHhhCCCCCccccc--c--cceEEEEecCCh--HHHHHHHHHHhhhcceEEEec--cCCceEEEeec-C
Confidence            6666677777776421   344332  1  122333445552  33 37888884 679887642  24579999985 5


Q ss_pred             CHHHHHHHHHHHHHHHHh
Q 043610          411 PLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       411 t~edv~~ll~~L~~~~~~  428 (430)
                      ++++++..++.|+++++.
T Consensus       369 ~~~~i~~~~~~l~~~~~~  386 (388)
T PRK08637        369 EEEDIPELFDSIYKAIKD  386 (388)
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            688999999988887753

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.64  E-value=3e-14  Score=136.39  Aligned_cols=316  Identities=14%  Similarity=0.108  Sum_probs=211.7

Q ss_pred             ecCCCCCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHh
Q 043610           74 FAAGPANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPL  152 (430)
Q Consensus        74 ~~~gp~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~  152 (430)
                      ++-|.+ -.|+|+++|.+.++++. |.|.+..-.+| ++    ...++++.||++.+.+.  -.+|  +|-.-|+...+.
T Consensus       180 DYLgms-~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~-s~----~hv~LE~eLA~LHqK~a--ALlF--sSCfVANDstLf  249 (570)
T KOG1360|consen  180 DYLGMS-RHPEVLDAMHDTLDRHGAGAGGTRNISGH-SK----HHVRLEAELADLHQKEA--ALLF--SSCFVANDSTLF  249 (570)
T ss_pred             cccccc-CChHHHHHHHHHHHHcCCCcCCccccCCC-Cc----hhhhHHHHHHHHhcCcc--eeee--eeeeeccchHHH
Confidence            333444 35689999999997753 23332221222 12    23378899999999876  3444  355777777777


Q ss_pred             hcC--CCCCcEEEEeCChhHHHHHHHHHHh-CCceEEecCCCCcCCCCCCccccc-----cCC-CccEEEEeecCCCccc
Q 043610          153 NLC--TPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVIWSGKAEKYTKIPNFDALE-----QNP-DAKYLHICANETIHGV  223 (430)
Q Consensus       153 sl~--~~gd~vl~~~~g~~~~~~~~~a~~~-g~~~~v~~~~~~~~g~~~d~~~l~-----i~~-~~~lv~i~~~~t~tG~  223 (430)
                      .+.  -||-++. .+.+..  ......-++ +....|-.     .   -|+++|+     ..+ -+|+|.+-.+++.+|.
T Consensus       250 tLak~lpgcei~-SD~gNH--ASMI~GIrns~v~K~IFr-----H---ND~~hL~~lL~~~~~svPKivAFEtVhSM~Ga  318 (570)
T KOG1360|consen  250 TLAKKLPGCEIF-SDEGNH--ASMIQGIRNSRVPKHIFR-----H---NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGA  318 (570)
T ss_pred             HHHHHCCCcEEe-ccccch--HHHHHHhhhcCCcceeec-----c---CCHHHHHHHHHhCCCCCCceEEEeeeeccCCC
Confidence            664  3676554 343322  111122233 32223322     1   2455554     222 3799999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCc----------cccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCC
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKP----------VDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTP  290 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~----------idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p  290 (430)
                      +-|  ||+++ +++|++.++|++|++|-.-          =-+.+.|++.++..|.||--| ||+..+.++++.++...+
T Consensus       319 vcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG-GYIAat~~LvDmiRSyAa  397 (570)
T KOG1360|consen  319 VCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG-GYIAATRKLVDMIRSYAA  397 (570)
T ss_pred             cCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc-ceehhhhhHHHHHHHhcC
Confidence            999  89997 7999999999999877541          115667899999999999778 999999999987655333


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                      .+.          ...+.|...+.++.+++++++.++|...++ .+++...++++.|.+ .|+.+++ .   .| +|+++
T Consensus       398 GFI----------FTTSLPP~vl~GAleaVr~lk~~eg~~lR~-~hqrnv~~~kq~l~~-~GiPVi~-~---pS-HIiPv  460 (570)
T KOG1360|consen  398 GFI----------FTTSLPPMVLAGALEAVRILKSEEGRVLRR-QHQRNVKYVKQLLME-LGIPVIP-N---PS-HIIPV  460 (570)
T ss_pred             ceE----------EecCCChHHHHhHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHH-cCCcccC-C---Cc-ceeee
Confidence            211          112456667778888999887665655444 445566899999997 7998764 2   24 58888


Q ss_pred             EcCCCchhHHHHHHH-HHcCCeecC-CC--CCCC--eeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          371 TLEKSDLEAEFVKEA-AKEKMVQLK-GH--RSVG--GMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       371 ~~~~~~~~~~~~~~L-~~~Gi~~~~-g~--~~~g--~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+..+..++...| .++||++-. .+  ...|  .+||.+...+|++-++.|+++|.+.+..
T Consensus       461 ~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~  524 (570)
T KOG1360|consen  461 RVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNE  524 (570)
T ss_pred             eccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            887654444677765 567988521 11  1223  5999999999999999999999988764

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.63  E-value=3.4e-14  Score=143.84  Aligned_cols=287  Identities=14%  Similarity=0.121  Sum_probs=176.0

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HHHH-HHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AFKE-AQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~~~-a~~~g-~~~~v~~~~~~~  193 (430)
                      .+..++.++++.|...   .+++ +||+.|+.+++.+++++||+|++....|.+.. +... .++.| ++..+..     
T Consensus        63 v~~lE~~la~leg~~~---av~~-~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~-----  133 (432)
T PRK06702         63 LAAFEQKLAELEGGVG---AVAT-ASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP-----  133 (432)
T ss_pred             HHHHHHHHHHHhCCCc---EEEE-CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC-----
Confidence            5578899999999863   4554 78999999999999999999998766554432 2222 45678 6665532     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC--CCccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC--SKPVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G--~~~idl~~~d~~~~s~~K~  266 (430)
                         ..|+++++  ++++||+|++.++.||++.+.|  +|+++ +++|+++++|++.+..  ..|++. ..|+++.|..||
T Consensus       134 ---~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~-GADIvv~S~TKy  209 (432)
T PRK06702        134 ---NLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEH-GANIIVHSTTKY  209 (432)
T ss_pred             ---CCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhc-CCCEEEEccccc
Confidence               24667787  7999999999999999999999  78887 7999999999986533  223333 137999999999


Q ss_pred             c-cCCc-cEEEEE-cHHH--H-----hccCCCCCcc----c-ccc-------chhh-cCCCCCCccHHHHHHHHHHHHHH
Q 043610          267 V-GPSG-VTIVIV-RKDL--L-----GNAQDKTPLM----L-DYK-------IHDE-NNSLYNTPPCYCIYMCGLVFEYL  323 (430)
Q Consensus       267 ~-gp~G-~g~l~v-~~~~--~-----~~~~~~~p~~----~-~~~-------~~~~-~~~~~~T~~~~~~~a~~~al~~l  323 (430)
                      + |..+ +|.+.+ +..+  .     +...+..+.+    . .+.       .... ...+..+++.+..+.+...|+  
T Consensus       210 ~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~--  287 (432)
T PRK06702        210 IDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLE--  287 (432)
T ss_pred             cCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccC--
Confidence            9 4433 554444 2211  0     0000000000    0 000       0000 001123445544444444443  


Q ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CCCCC------------CCccceEEEEcCCCchhH--HHHHHHHH
Q 043610          324 LELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PVEKS------------VRSFMNVPFTLEKSDLEA--EFVKEAAK  387 (430)
Q Consensus       324 ~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~~~~------------~rs~~iv~f~~~~~~~~~--~~~~~L~~  387 (430)
                          -++.+.++..+.+..+.++|++.+.+..+  |.-+.            ....++++|.+++ +.+.  +|++.|+-
T Consensus       288 ----Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~-~~~~~~~f~~~l~l  362 (432)
T PRK06702        288 ----TLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKG-GLEAAKEFIANVKL  362 (432)
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-CHHHHHHHHHhCcc
Confidence                35677788888999999999976554422  21111            1134689999974 2222  46665542


Q ss_pred             cCCe----------ecC---CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          388 EKMV----------QLK---GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       388 ~Gi~----------~~~---g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      -.+.          ..+   .+.            ..+.||+|++.    ||+|.|++-|+..++
T Consensus       363 ~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl----Ed~eDLi~Dl~~Al~  423 (432)
T PRK06702        363 ATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----EDVSDIIADLEAALV  423 (432)
T ss_pred             ceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence            1111          101   111            13469999996    777777777777665

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.62  E-value=8.1e-14  Score=141.21  Aligned_cols=285  Identities=11%  Similarity=0.072  Sum_probs=182.4

Q ss_pred             HHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhH-HHHHHHHHHhC-CceEEecCCCC----
Q 043610          119 KAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWG-DKAFKEAQKFC-NPQVIWSGKAE----  192 (430)
Q Consensus       119 ~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~-~~~~~~a~~~g-~~~~v~~~~~~----  192 (430)
                      ++++.+++++|.+   +++++ .|+|.|+..++..+++|||.|+  .+.+|. +.  ......| +++.++..+..    
T Consensus        57 ~Leeaia~~~g~~---~vv~t-~~Gt~Al~la~~al~~pGD~V~--~~~~f~~~~--~~i~~~Ga~pv~v~i~~~~~~~~  128 (431)
T cd00617          57 DLEDAVQDLFGFK---HIIPT-HQGRGAENILFSILLKPGRTVP--SNMHFDTTR--GHIEANGAVPVDLVIDEAHDAQE  128 (431)
T ss_pred             HHHHHHHHHHCCC---eEEEc-CCHHHHHHHHHHHhCCCCCEEc--cCCcccchH--HHHHhCCCEeEEEeccccccccc
Confidence            7778899999986   56665 7899999999999999999763  344443 32  2334456 88877775321    


Q ss_pred             --cCCCCCCccccc--cCCC----ccEEEEeecCCCc-cccCC--C---Cccc-cCCCcEEEEeccCcCC----------
Q 043610          193 --KYTKIPNFDALE--QNPD----AKYLHICANETIH-GVEFK--E---YPSA-KNSTGILVADMSSNFC----------  247 (430)
Q Consensus       193 --~~g~~~d~~~l~--i~~~----~~lv~i~~~~t~t-G~~~p--e---i~~~-~~~g~~lvvD~a~s~G----------  247 (430)
                        ++...+|++.|+  ++++    +++|+++.++|++ |...+  +   |.++ +++|++++.|+++.++          
T Consensus       129 ~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~  208 (431)
T cd00617         129 LIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREE  208 (431)
T ss_pred             ccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccc
Confidence              132347888887  6654    8899999999998 89987  3   4554 6899999999997643          


Q ss_pred             -CCccccc-------cc-cEEEeCCCcccc-CCccEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHH
Q 043610          248 -SKPVDVT-------RF-GVIYAGAQKNVG-PSGVTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMC  316 (430)
Q Consensus       248 -~~~idl~-------~~-d~~~~s~~K~~g-p~G~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~  316 (430)
                       .....+.       .+ |.+..|++|-.+ +.| |+++.++ ++.++++....   .    .+....+|..+.-.+.++
T Consensus       209 g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~~~~~~~~---~----~~~~~~~gG~~~r~~~A~  280 (431)
T cd00617         209 GYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEEARQRVV---L----YEGFVTYGGMAGRDMEAL  280 (431)
T ss_pred             cccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHHHHHHhcc---c----cCCccccccccHHHHHHH
Confidence             2222221       22 688999999885 766 8888886 57776542110   0    011123344555555555


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC-------CchhH-HHHHHH-HH
Q 043610          317 GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK-------SDLEA-EFVKEA-AK  387 (430)
Q Consensus       317 ~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~-------~~~~~-~~~~~L-~~  387 (430)
                      ..+|+...   ..+.+.+++. .++++.+.|.+ .|+.+..  | .-+ +.+.+.++.       .+.+. +|+.+| .+
T Consensus       281 A~gL~e~~---~~~~l~~~~~-~r~~l~~~L~~-~G~~v~~--P-~Gg-h~v~~d~~~~~~~~~~~~~~~~~la~~L~~e  351 (431)
T cd00617         281 AQGLREAV---EEDYLRHRVE-QVRYLGDRLDE-AGVPIVE--P-AGG-HAVFIDAREFLPHIPQEQFPAQALAAELYLE  351 (431)
T ss_pred             HHHHHhcc---cHHHHHHHHH-HHHHHHHHHHH-CCCCccC--C-Ccc-eEEEEEhHHhcCCCCcccCcHHHHHHHHHHH
Confidence            55665321   1344555555 44889999997 6886652  2 112 233344331       11123 688665 56


Q ss_pred             cCCeecC-CC----C----------CCCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          388 EKMVQLK-GH----R----------SVGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       388 ~Gi~~~~-g~----~----------~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                      .||.... |.    +          ....+|+++-- -.|.++++.+.++|.++.++
T Consensus       352 ~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~  408 (431)
T cd00617         352 AGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER  408 (431)
T ss_pred             cCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence            6888532 21    0          13469999765 35899999999999998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.62  E-value=1e-13  Score=138.62  Aligned_cols=288  Identities=15%  Similarity=0.124  Sum_probs=179.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~  192 (430)
                      ...++.++.+++++|..   .++.+ +|+|.|+.+++.++ +++||+|++....+.+.  .......| +++.+.+.+  
T Consensus        25 ~~~~~fE~~~a~~~g~~---~~~~~-~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~--~~ai~~~G~~pv~~Di~~--   96 (363)
T PF01041_consen   25 PYVEEFEKEFAEYFGVK---YAVAV-SSGTSALHLALRALGLGPGDEVIVPAYTFPAT--ASAILWAGAEPVFVDIDP--   96 (363)
T ss_dssp             HHHHHHHHHHHHHHTSS---EEEEE-SSHHHHHHHHHHHTTGGTTSEEEEESSS-THH--HHHHHHTT-EEEEE-BET--
T ss_pred             HHHHHHHHHHHHHhCCC---eEEEe-CChhHHHHHHHHhcCCCcCceEecCCCcchHH--HHHHHHhccEEEEEeccC--
Confidence            35668889999999976   56665 78999999999998 47999999876665543  23455678 888888864  


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc--ccccc-cEEEeC--
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV--DVTRF-GVIYAG--  262 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--dl~~~-d~~~~s--  262 (430)
                       ....+|++.++  +++++++|+++|.   -|...|  +|.++ +++|+++|-|++|++|...-  .+..+ |+.++|  
T Consensus        97 -~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~  172 (363)
T PF01041_consen   97 -ETLNIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFH  172 (363)
T ss_dssp             -TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESS
T ss_pred             -CcCCcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCC
Confidence             22358899888  7999999999874   366667  67775 68999999999999997531  12233 455555  


Q ss_pred             CCcccc-CCccEEEEEcH-HHHhccCCCCCccccccc--h-hhcCCC-CC---CccHHHHHHHHHHHHHHHHhcCHHHHH
Q 043610          263 AQKNVG-PSGVTIVIVRK-DLLGNAQDKTPLMLDYKI--H-DENNSL-YN---TPPCYCIYMCGLVFEYLLELGGLNEVE  333 (430)
Q Consensus       263 ~~K~~g-p~G~g~l~v~~-~~~~~~~~~~p~~~~~~~--~-~~~~~~-~~---T~~~~~~~a~~~al~~l~~~~g~~~v~  333 (430)
                      ..|.+. .-| |+++.++ ++.+++.....  .+...  . ...... +|   -++-   ..+..++..+.   -+++..
T Consensus       173 ~~K~i~~geG-G~v~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~g~n~rm~~---~~AAigl~QL~---~L~~~~  243 (363)
T PF01041_consen  173 PTKIITTGEG-GAVVTNDPELAERARALRN--HGRSRDAFRRYRHELPPGYNFRMSE---LQAAIGLAQLK---RLDEII  243 (363)
T ss_dssp             TTSSS-SSS--EEEEESTHHHHHHHHHHTB--TTEETSECSTTEESSSS--B-B-BH---HHHHHHHHHHH---THHHHH
T ss_pred             CCCCCcCCCC-eeEEecHHHHHHHhhhhhc--cCcCccccccccccccCCcccccHH---HHHHHHHHHHH---HhhhhH
Confidence            469994 545 7788865 44444321000  00000  0 000000 11   1111   11222233333   367888


Q ss_pred             HHHHHHHHHHHHHHHccCCceecCCCC-CC-CccceEEEEcCCCc--hhHHHHHHHHHcCCeecCCCC----------C-
Q 043610          334 KMNRKKAELLYNVIDGSNGFYKCPVEK-SV-RSFMNVPFTLEKSD--LEAEFVKEAAKEKMVQLKGHR----------S-  398 (430)
Q Consensus       334 ~~~~~l~~~l~~~l~~~~G~~~~~~~~-~~-rs~~iv~f~~~~~~--~~~~~~~~L~~~Gi~~~~g~~----------~-  398 (430)
                      ++.+++.+++.+.|.+..++...+..+ .. .+...+++.+++..  ...++++.|.++||.....+.          . 
T Consensus       244 ~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~  323 (363)
T PF01041_consen  244 ARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSY  323 (363)
T ss_dssp             HHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTG
T ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhc
Confidence            888899999999999877765543222 21 34456777777531  123799999999998543220          0 


Q ss_pred             ---------------CCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          399 ---------------VGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       399 ---------------~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                                     ...+.+-++...+++|+++++++|+
T Consensus       324 ~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir  363 (363)
T PF01041_consen  324 PYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR  363 (363)
T ss_dssp             EEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred             CccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence                           1258888999999999999999886

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.62  E-value=3.6e-13  Score=132.58  Aligned_cols=314  Identities=15%  Similarity=0.148  Sum_probs=199.8

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd  159 (430)
                      +.+.-++++.+.+..    |+    ... +    ...++.++.+++++|+..   .+.+ +|+|.|+.+++.++ ++|||
T Consensus        13 i~~~e~~~v~~vl~s----g~----i~~-G----~~v~~FE~~~ae~~G~k~---ava~-~sgT~AL~laL~al~ig~GD   75 (374)
T COG0399          13 IGEEELAAVQEVLKS----GW----LTG-G----PFVRRFEQAFAEYLGVKY---AVAV-SSGTAALHLALLALAIGPGD   75 (374)
T ss_pred             cchHHHHHHHHHHHc----CC----eec-C----hHHHHHHHHHHHHhCCCe---EEEe-cChHHHHHHHHHhcCCCCCC
Confidence            556777777777753    21    111 2    234477789999999984   4555 78999999999966 59999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN  233 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~  233 (430)
                      +|++....+...  .......| +++++.++.+   ...+|++.++  |+++||+|+.+|-   -|..-|  .|.++ ++
T Consensus        76 eVI~ps~TfvAT--an~i~~~Ga~PVFvDid~~---T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~  147 (374)
T COG0399          76 EVIVPSFTFVAT--ANAVLLVGAKPVFVDIDPD---TLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKR  147 (374)
T ss_pred             EEEecCCchHHH--HHHHHHcCCeEEEEecCCc---ccCCCHHHHHHHcccCCeEEEEehh---ccCCCCHHHHHHHHHH
Confidence            999776655543  23344567 9999998642   2358999998  8999999999873   366667  67776 69


Q ss_pred             CCcEEEEeccCcCCCCcc--ccccc---cEEEeCCCcccc-CCccEEEEEc-HHHHhccCC-----CCCccccccch-hh
Q 043610          234 STGILVADMSSNFCSKPV--DVTRF---GVIYAGAQKNVG-PSGVTIVIVR-KDLLGNAQD-----KTPLMLDYKIH-DE  300 (430)
Q Consensus       234 ~g~~lvvD~a~s~G~~~i--dl~~~---d~~~~s~~K~~g-p~G~g~l~v~-~~~~~~~~~-----~~p~~~~~~~~-~~  300 (430)
                      +|++++-|++|++|+.--  .+-.+   ..+.+-+.|.+. --| |.+..+ +++.++++.     ..... +++.. ..
T Consensus       148 ~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEG-Gav~tnd~ela~k~~~lr~hG~~~~~-~~~y~~~~  225 (374)
T COG0399         148 HGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEG-GAVVTNDEELAEKARSLRNHGLSRDA-VFKYLHEE  225 (374)
T ss_pred             cCCeEEEEcchhccCeecCcccccccceEEEEecCCCCccccCc-eEEEeCCHHHHHHHHHHHHhCcCCCc-cccceeee
Confidence            999999999999998632  12223   356677889885 345 666665 455555431     00000 00000 00


Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC-CccceEEEEcCCCchhH
Q 043610          301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV-RSFMNVPFTLEKSDLEA  379 (430)
Q Consensus       301 ~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~-rs~~iv~f~~~~~~~~~  379 (430)
                      -|.   --....+.++. .+..+.   .+++..++-+++.++..+.|++..++.+...++.. .+.....+.+++.+.+.
T Consensus       226 ~G~---N~rm~~iqAAi-gl~QL~---~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R  298 (374)
T COG0399         226 LGY---NYRLTEIQAAI-GLAQLE---RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISR  298 (374)
T ss_pred             ccc---ccCHHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCH
Confidence            011   11112222211 222232   46788888888888999999875455443222222 33344555666432333


Q ss_pred             -HHHHHHHHcCCee----cC----------CC---C--------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          380 -EFVKEAAKEKMVQ----LK----------GH---R--------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       380 -~~~~~L~~~Gi~~----~~----------g~---~--------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       ++++.|+++||..    .+          +.   .        ....+++-++...+++|+++++++|++++.+
T Consensus       299 ~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~  373 (374)
T COG0399         299 DALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS  373 (374)
T ss_pred             HHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence             6999999997652    11          00   0        1236899999999999999999999998764

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.61  E-value=3.7e-13  Score=136.46  Aligned_cols=323  Identities=12%  Similarity=0.061  Sum_probs=190.6

Q ss_pred             CCCCceeecCC-----CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAG-----PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~g-----p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.++|..|     -+--+|.|++++.+.+.+....+.    . ...    ....++.+.|+++++.  + .++++ +
T Consensus        38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~----~-~~~----~~~~~l~~~l~~~~~~--~-~~~~~-~  104 (403)
T PRK05093         38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISN----V-FTN----EPALRLAKKLIDATFA--E-RVFFA-N  104 (403)
T ss_pred             CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccC----c-cCC----HHHHHHHHHHHhhCCC--C-EEEEe-C
Confidence            34455666554     244688999999998865321110    0 011    2234677777777654  2 67776 6


Q ss_pred             cHHHHHHHHHhhc--C-----CC-CCcEEEEeCChhHHHHHHHHHHh-CCceEE----ecCCCCcCCCCCCccccc--cC
Q 043610          142 GATTQFAAVPLNL--C-----TP-NDPVDYIVTGSWGDKAFKEAQKF-CNPQVI----WSGKAEKYTKIPNFDALE--QN  206 (430)
Q Consensus       142 gaT~a~~~~~~sl--~-----~~-gd~vl~~~~g~~~~~~~~~a~~~-g~~~~v----~~~~~~~~g~~~d~~~l~--i~  206 (430)
                      ||++|++.++.-.  .     .. .+.++.++.++.|.-+.  +... +.....    +.......-...|+++++  +.
T Consensus       105 sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~  182 (403)
T PRK05093        105 SGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLF--TVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVID  182 (403)
T ss_pred             chHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhh--hHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhc
Confidence            8999999887632  1     12 34566666555553221  1111 111000    000000000012556666  56


Q ss_pred             CCccEEEEeecCCCccccC--C-----CCccc-cCCCcEEEEeccCc-CCCC--cc--cccc--ccEEEeCCCccccCCc
Q 043610          207 PDAKYLHICANETIHGVEF--K-----EYPSA-KNSTGILVADMSSN-FCSK--PV--DVTR--FGVIYAGAQKNVGPSG  271 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~--p-----ei~~~-~~~g~~lvvD~a~s-~G~~--~i--dl~~--~d~~~~s~~K~~gp~G  271 (430)
                      +++++|++.- .+++|...  +     +|.++ +++|+++++|++|+ +|..  ..  ....  .|  +.+++|.+| +|
T Consensus       183 ~~~aaiiiep-~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd--i~s~sK~l~-~G  258 (403)
T PRK05093        183 DHTCAVVVEP-IQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPD--ILTSAKALG-GG  258 (403)
T ss_pred             CCeEEEEEec-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCC--EEEeccccc-CC
Confidence            7888888874 44554443  3     35554 68999999999976 3321  11  1111  14  346789998 47


Q ss_pred             --cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          272 --VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       272 --~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                        +|+++.++++++.+....           .+.++ ..+...++++.++|+.+..    ++..++.+++++++++.|.+
T Consensus       259 ~rig~vv~~~~i~~~l~~~~-----------~~~t~-~~~~~~~~aa~a~L~~~~~----~~~~~~~~~~~~~l~~~L~~  322 (403)
T PRK05093        259 FPIGAMLTTAEIASHFKVGT-----------HGSTY-GGNPLACAVAEAVFDIINT----PEVLEGVKARRQRFVDGLQK  322 (403)
T ss_pred             cceEEEEEcHHHHhhcCCCC-----------CCCCC-CCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHH
Confidence              899999999877643210           01122 3456678888888987642    34567888888999999986


Q ss_pred             cCCceecC-CCCCCCccceEEEEcCCCc--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          350 SNGFYKCP-VEKSVRSFMNVPFTLEKSD--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       350 ~~G~~~~~-~~~~~rs~~iv~f~~~~~~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       .+..... .+....+ ..+.+.+++..  ...+|...|.++||.+.++.  .+.+|+++...+++++++++++.|++++
T Consensus       323 -~~~~~~~~~~~~~~G-~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g--~~~lRl~~~~~~~~~~i~~~~~~l~~~l  398 (403)
T PRK05093        323 -INQKYGVFSEIRGMG-LLIGAELKPQYKGRARDFLNAAAEEGVMVLVAG--PDVLRFAPSLVIEEADIDEGLARFEKAV  398 (403)
T ss_pred             -HHhhCCCeEeEeeCc-eEEEEEecCcchhHHHHHHHHHHHCCeEEecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence             3322110 0111112 33445554311  23378999989999987632  2579999988889999999999999987


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      .+
T Consensus       399 ~~  400 (403)
T PRK05093        399 AK  400 (403)
T ss_pred             HH
Confidence            64

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.60  E-value=2.7e-13  Score=137.28  Aligned_cols=290  Identities=14%  Similarity=0.100  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH-HHHHHHHhhcC--C-CCCcEEEEeCChhHHHHHHHHHHhC-CceEE
Q 043610          112 EFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT-TQFAAVPLNLC--T-PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVI  186 (430)
Q Consensus       112 ~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT-~a~~~~~~sl~--~-~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v  186 (430)
                      -...+.++.++.+++++|+++-...+++ +++| .++.+++.++-  + +||+|++....+.+.  .+.+...| +++.+
T Consensus       102 ~~~~l~~~~e~~~~~~~G~~~~~~a~~v-~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~--~kAi~~~G~~pv~V  178 (444)
T TIGR03531       102 LLYKLTNKLVKDFLKLLGLRSIKSAFVV-PLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSC--IKAISTAGFEPRVI  178 (444)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCCEEEEE-CCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHH--HHHHHHcCCeEEEe
Confidence            3456778899999999999843235555 6788 67777766652  2 589999887765553  23445567 88888


Q ss_pred             ecC-CCCcCCCCCCccccc--cCC---CccEEEEeecCC-CccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-----
Q 043610          187 WSG-KAEKYTKIPNFDALE--QNP---DAKYLHICANET-IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV-----  251 (430)
Q Consensus       187 ~~~-~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~~t-~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i-----  251 (430)
                      +.. ++  ....+|+++++  +++   ++.+++++.+++ ..|...|  +|.++ +++|+++++|++++++...+     
T Consensus       179 d~~~d~--~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~  256 (444)
T TIGR03531       179 ETVLDG--DELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELIN  256 (444)
T ss_pred             eeeecC--cCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhh
Confidence            852 22  23357888887  665   344444433321 1124444  67776 69999999999999765321     


Q ss_pred             ---ccccccEEEeCCCcccc-CCccEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          252 ---DVTRFGVIYAGAQKNVG-PSGVTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       252 ---dl~~~d~~~~s~~K~~g-p~G~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                         +....|++++++||++. |.+.|+++. ++++++.+...   |.        +..   .+.+.+.+...++. +. .
T Consensus       257 ~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~---y~--------g~~---~~s~~~~~~~~ll~-~G-~  320 (444)
T TIGR03531       257 KAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKS---YP--------GRA---SASPSLDVLITLLS-LG-S  320 (444)
T ss_pred             ccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHh---cc--------CCC---CChHHHHHHHHHHH-hC-H
Confidence               12235889999999997 666566667 46666654321   10        111   22233333333333 22 2


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcc---CCceecCCCCCCCccceEEEEcCCC-chhH-HHHHHHHHcCCee----cCCC-
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKS-DLEA-EFVKEAAKEKMVQ----LKGH-  396 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~-~~~~-~~~~~L~~~Gi~~----~~g~-  396 (430)
                      .|++++.++..++++++.+.|.+.   .|..++.. +.  .+.-+.+.+... +.+. .+-.+|-..+|..    .+|. 
T Consensus       321 ~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~-~~--n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~  397 (444)
T TIGR03531       321 KGYLELLKERKEMYKYLKELLQKLAERHGERLLDT-PE--NPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDS  397 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecC-CC--CceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCc
Confidence            478899999999999999998873   35666531 11  122233343310 1223 5777887766531    1221 


Q ss_pred             CCCC-----------------eeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          397 RSVG-----------------GMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       397 ~~~g-----------------~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ...|                 ++-+....-++.+|||.+++.|++.
T Consensus       398 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~  443 (444)
T TIGR03531       398 KTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS  443 (444)
T ss_pred             eEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence            0112                 2333333345899999999999875

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.60  E-value=4.8e-13  Score=135.31  Aligned_cols=322  Identities=11%  Similarity=0.095  Sum_probs=192.5

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+.+.+....+..   ..      .+...++.+.|+++++.  + .++|+ +
T Consensus        33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~---~~------~~~~~~la~~L~~~~~~--~-~~~f~-~   99 (397)
T TIGR03246        33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNG---YT------NEPVLRLAKKLVDATFA--D-KVFFC-N   99 (397)
T ss_pred             CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCc---cC------CHHHHHHHHHHHhhCCC--C-EEEEe-C
Confidence            344555555542     334889999999998763222211   11      12345777888888764  2 67776 7


Q ss_pred             cHHHHHHHHHhhcC-------CC-CCcEEEEeCChhHHHHHHHHHHh-CCceEE----ecCCCCcCCCCCCccccc--cC
Q 043610          142 GATTQFAAVPLNLC-------TP-NDPVDYIVTGSWGDKAFKEAQKF-CNPQVI----WSGKAEKYTKIPNFDALE--QN  206 (430)
Q Consensus       142 gaT~a~~~~~~sl~-------~~-gd~vl~~~~g~~~~~~~~~a~~~-g~~~~v----~~~~~~~~g~~~d~~~l~--i~  206 (430)
                      ||++|++.++....       ++ .++++..+.++.|.-.  .+... +....-    +.......-.-.|+++++  +.
T Consensus       100 SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~  177 (397)
T TIGR03246       100 SGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTL--FTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALIS  177 (397)
T ss_pred             CcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccH--HHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhc
Confidence            89999998877541       12 3456666655554321  11111 211000    000000000013566676  66


Q ss_pred             CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------ccccccccEEEeCCCccccCCc
Q 043610          207 PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTRFGVIYAGAQKNVGPSG  271 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~~d~~~~s~~K~~gp~G  271 (430)
                      +++++|++..+++..|+..+      +|.++ +++|+++++|++|. +|-.       ..++ ..|++  +..|.+| .|
T Consensus       178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~--t~~K~lg-gG  253 (397)
T TIGR03246       178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDIL--TSAKALG-GG  253 (397)
T ss_pred             cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCC-CCCEE--Eeehhhh-CC
Confidence            78888998877777787754      35554 69999999999973 3211       1112 12554  6789995 24


Q ss_pred             --cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          272 --VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       272 --~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                        +|++..++++.+.+...           ....++ +.+...+.++.++|+.+.+    +++.++.+++.+++++.|++
T Consensus       254 ~pigav~~~~~i~~~~~~~-----------~~~~t~-~~~p~~~aaa~a~l~~~~~----~~l~~~~~~~~~~l~~~L~~  317 (397)
T TIGR03246       254 FPIGAMLTTTEIAAHLKVG-----------THGTTY-GGNPLACAVAGKVLDLVNT----PELLAGVKQRHDLFVDGLEK  317 (397)
T ss_pred             cceeEEEEcHHHHHhccCC-----------CcCCCC-CCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHH
Confidence              78888898887654211           011222 3455667778888887642    45778888889999998886


Q ss_pred             cCC--ceecCCCCCCCccceEEEEcCCC--chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          350 SNG--FYKCPVEKSVRSFMNVPFTLEKS--DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       350 ~~G--~~~~~~~~~~rs~~iv~f~~~~~--~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                       .+  +.++. +-.... .++.+.+.+.  ....++.+.|.++|+++....  .+.+|+++...++++||+++++.|+++
T Consensus       318 -l~~~~~~~~-~vrg~G-~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~~lR~~p~~~~t~~~i~~~~~~l~~~  392 (397)
T TIGR03246       318 -INARYNVFS-EIRGKG-LLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAG--PNVVRFAPSLVISDDDIDEGLARFERA  392 (397)
T ss_pred             -HHhcCCCeE-eeecCc-eEEEEEEcCchhhHHHHHHHHHHHCCeEEeecC--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence             33  21111 111112 2334444321  123368889999999976421  257999999999999999999999998


Q ss_pred             HHh
Q 043610          426 QAK  428 (430)
Q Consensus       426 ~~~  428 (430)
                      +.+
T Consensus       393 l~~  395 (397)
T TIGR03246       393 IEQ  395 (397)
T ss_pred             HHH
Confidence            764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.59  E-value=3.6e-13  Score=135.20  Aligned_cols=304  Identities=11%  Similarity=0.045  Sum_probs=176.6

Q ss_pred             cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCCC
Q 043610           82 PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPND  159 (430)
Q Consensus        82 ~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~gd  159 (430)
                      .|.|++++.+.+.......         +.    ...+.++.+++.+....+ .++++++|+|+++..++...  ..+++
T Consensus        46 ~p~v~~a~~~~~~~~~~~~---------~~----~~~~~~~~la~~l~~~~~-~~~~~~~SGseA~~~Al~~ar~~~~~~  111 (375)
T PRK04260         46 HPQVQQALQKQAGLIWHSP---------NL----YLNSLQEEVAQKLIGDKD-YLAFFCNSGAEANEAAIKIARKATGKQ  111 (375)
T ss_pred             CHHHHHHHHHHHHhcCccc---------Cc----cCCHHHHHHHHHHhcCcC-CEEEEcCccHHHHHHHHHHHHHhcCCC
Confidence            7789999999886532110         00    122455666665543333 34444589999999776654  24466


Q ss_pred             cEEEEeCChhHHHHHHHHHHhC-CceE--EecC-CCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC------C
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFC-NPQV--IWSG-KAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK------E  227 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~--v~~~-~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p------e  227 (430)
                      +|++.+.++.+.-+. .....+ ....  .... ....+....|++.++  +.+++.+|++..+++++|+..+      +
T Consensus       112 ~vv~~~~~yHg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~l~~  190 (375)
T PRK04260        112 EIITFQNSFHGRTFG-SMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDFVKA  190 (375)
T ss_pred             eEEEECCCcCcccHH-HHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHHHHH
Confidence            777776665543211 111111 1100  0000 000011123566666  5677889999999999999876      2


Q ss_pred             Cccc-cCCCcEEEEeccCc-CCCC--ccc--ccc--ccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccc
Q 043610          228 YPSA-KNSTGILVADMSSN-FCSK--PVD--VTR--FGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKI  297 (430)
Q Consensus       228 i~~~-~~~g~~lvvD~a~s-~G~~--~id--l~~--~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~  297 (430)
                      +.++ +++|+++++|+++. +|..  ...  ...  -|++  +++|.+|+ |  +|++++++++.+.+....        
T Consensus       191 ~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~-G~~ig~~~~~~~~~~~~~~~~--------  259 (375)
T PRK04260        191 LADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLAN-GVPVGAMLAKSSLGGAFGYGS--------  259 (375)
T ss_pred             HHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEE--EecccccC-CcceEEEEEcHHHHhhcCCCC--------
Confidence            4443 58999999999974 3321  111  111  2443  78999974 4  799999988866542100        


Q ss_pred             hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC-ceecCCCCCCCccceEEEEcCCCc
Q 043610          298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG-FYKCPVEKSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-~~~~~~~~~~rs~~iv~f~~~~~~  376 (430)
                         ...+ .+.+...+.++.++|+.+....-++.+++..+.+++.+.+.+.+ .+ +..+.    ..+ ..+.+.++.  
T Consensus       260 ---~~~t-~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~----~~g-~~~~~~~~~--  327 (375)
T PRK04260        260 ---HGST-FGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQD-KETVTTVR----GLG-YMIGIETTA--  327 (375)
T ss_pred             ---CCCC-CCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEEe----ccc-eEEEEEecC--
Confidence               0112 23455677778888877653322344555555555555555443 22 11110    122 234455432  


Q ss_pred             hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          377 LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       377 ~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ...++.++|.++||.+.+..  .+.+|++++..++++|++++++.|+++
T Consensus       328 ~~~~~~~~l~~~Gi~v~~~~--~~~lR~~~~~~~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        328 DLSQLVEAARDKGLIVLTAG--TNVIRLLPPLTLTKEEIEQGIAILSEV  374 (375)
T ss_pred             cHHHHHHHHHhCCCEEecCC--CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence            12378999999999986532  257999999899999999999999875

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=99.56  E-value=4.5e-13  Score=129.06  Aligned_cols=269  Identities=16%  Similarity=0.111  Sum_probs=178.3

Q ss_pred             CCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHH-HHhC-CceEEecCCCCcCCCCCCccccc----
Q 043610          131 PQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEA-QKFC-NPQVIWSGKAEKYTKIPNFDALE----  204 (430)
Q Consensus       131 ~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a-~~~g-~~~~v~~~~~~~~g~~~d~~~l~----  204 (430)
                      +++ .+++ ++|+|.+++.+..-+..|||..++..+-+.|  |-..+ -+.| +++.|....  ..|..++.+++|    
T Consensus       145 dP~-~~Vv-~~G~T~ane~l~fcLadpgdafLvPtPyY~g--fdrdl~~rTgveivpv~c~S--s~~f~itv~alE~A~~  218 (471)
T KOG0256|consen  145 DPE-RVVV-TNGATSANETLMFCLADPGDAFLVPTPYYPG--FDRDLRWRTGVEIVPVHCSS--SNGFQITVEALEAALN  218 (471)
T ss_pred             Ccc-ceEE-ecccchhhHHHHHHhcCCCceeeecCCCCCc--ccccceeccCceEEEEEeec--CCCccccHHHHHHHHH
Confidence            454 5665 5899999999888888999999976543333  21122 2446 666666544  245567877765    


Q ss_pred             ----cCCCccEEEEeecCCCccccCC--CCccc----cCCCcEEEEeccCcCC---CCcc-c-------cc-ccc--EEE
Q 043610          205 ----QNPDAKYLHICANETIHGVEFK--EYPSA----KNSTGILVADMSSNFC---SKPV-D-------VT-RFG--VIY  260 (430)
Q Consensus       205 ----i~~~~~lv~i~~~~t~tG~~~p--ei~~~----~~~g~~lvvD~a~s~G---~~~i-d-------l~-~~d--~~~  260 (430)
                          .+-++|.|++++++||-|+.++  ++..+    .++++.+|+|++++..   ...+ .       .+ +.|  -++
T Consensus       219 ~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHiv  298 (471)
T KOG0256|consen  219 QARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIV  298 (471)
T ss_pred             HHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEE
Confidence                2457899999999999999999  45442    5899999999987632   2111 1       11 123  488


Q ss_pred             eCCCccccCCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH--HHHHhcCHHHHHHH
Q 043610          261 AGAQKNVGPSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE--YLLELGGLNEVEKM  335 (430)
Q Consensus       261 ~s~~K~~gp~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~--~l~~~~g~~~v~~~  335 (430)
                      .|.+|-+|.+|  +|.+|-.. +......+              -+.+|..+...++.+..-|.  +.. +..+.+..+|
T Consensus       299 yslSKD~GlpGfRvGviYS~ne~VvsaA~k--------------mssf~~vSs~tQ~~la~LLSD~~f~-~~yl~en~~R  363 (471)
T KOG0256|consen  299 YSLSKDFGLPGFRVGVIYSNNEDVVSAATK--------------MSSFGLVSSQTQYLLASLLSDEEFT-REYLRENNKR  363 (471)
T ss_pred             EEeccccCCCceEEEEEEecChHHHHHHHH--------------HhhccCCcHHHHHHHHHHhchHHHH-HHHHHHHHHH
Confidence            99999999989  88888754 44433222              12234455566666655552  222 2367888999


Q ss_pred             HHHHHHHHHHHHHccCCceecCCCCCCCccceEEE-Ec----CCCchhH--HHHHHHHHc-CCeecCCCC----CCCeeE
Q 043610          336 NRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF-TL----EKSDLEA--EFVKEAAKE-KMVQLKGHR----SVGGMR  403 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f-~~----~~~~~~~--~~~~~L~~~-Gi~~~~g~~----~~g~iR  403 (430)
                      ++..-+++.++|++ .|+..+.     +..+.+++ .+    +....+.  ++.+++.++ ++.+.+|.-    ..|++|
T Consensus       364 l~~rh~~~~~gLk~-lgI~cl~-----s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFR  437 (471)
T KOG0256|consen  364 LRIRHRYIVEGLKA-LGIPCLK-----SNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFR  437 (471)
T ss_pred             HHHHHHHHHhhHHh-cCCceee-----cCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEE
Confidence            99999999999996 8888774     23345553 22    2222233  566776665 999888852    478999


Q ss_pred             EeecCCCCHHHHHHHHHHHHHHHH
Q 043610          404 ASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       404 is~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +++.+ +.++.++-.++.|+.++.
T Consensus       438 vcFAn-~~~~t~~~am~Ri~~~~~  460 (471)
T KOG0256|consen  438 VCFAN-MSEETLEVAMRRLKQFLD  460 (471)
T ss_pred             EEecc-CCHHHHHHHHHHHHHHHH
Confidence            99975 445666667777777654

>PLN02624 ornithine-delta-aminotransferase

Probab=99.56  E-value=7.8e-13  Score=136.49  Aligned_cols=323  Identities=11%  Similarity=0.089  Sum_probs=186.3

Q ss_pred             CCCCceeecCCCC--CC---cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPA--NL---PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~--~~---~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.|..|-.  .+   .|.|++++.+.+.+.. .+++.  ..      .+...++.+.|+++++.+   .++|+ +
T Consensus        73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~-~~~~~--~~------~~~~~~la~~L~~~~~~~---~~~f~-~  139 (474)
T PLN02624         73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLT-LSSRA--FY------NDKFPEFAEYLTSMFGYD---MVLPM-N  139 (474)
T ss_pred             CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcC-Ccccc--cC------CHHHHHHHHHHHhhcCCC---eEEEe-C
Confidence            3444555655543  33   8999999999987521 11110  11      133446777788887642   67776 7


Q ss_pred             cHHHHHHHHHhhcC-----C---C-CCc-EEEEeCChhHHHHHHHHHHhCCce-EE---ecCCC---CcCCCCCCccccc
Q 043610          142 GATTQFAAVPLNLC-----T---P-NDP-VDYIVTGSWGDKAFKEAQKFCNPQ-VI---WSGKA---EKYTKIPNFDALE  204 (430)
Q Consensus       142 gaT~a~~~~~~sl~-----~---~-gd~-vl~~~~g~~~~~~~~~a~~~g~~~-~v---~~~~~---~~~g~~~d~~~l~  204 (430)
                      ||++|++.++.-..     +   + ++. ++....++.|.-..... ..+... .-   +....   .++   .|+++++
T Consensus       140 SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~  215 (474)
T PLN02624        140 TGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAIS-MSCDNEATRGFGPLLPGHLKVDF---GDLDALE  215 (474)
T ss_pred             ChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhh-cCCCccccccCCCCCCCceEeCC---CCHHHHH
Confidence            89999998765211     1   1 333 44444334332111111 111110 00   00000   001   1345554


Q ss_pred             --cC---CCccEEEEeecCCCccccCC-C--Ccc---c-cCCCcEEEEeccCc-CCC----Cccccccc--cEEEeCCCc
Q 043610          205 --QN---PDAKYLHICANETIHGVEFK-E--YPS---A-KNSTGILVADMSSN-FCS----KPVDVTRF--GVIYAGAQK  265 (430)
Q Consensus       205 --i~---~~~~lv~i~~~~t~tG~~~p-e--i~~---~-~~~g~~lvvD~a~s-~G~----~~idl~~~--d~~~~s~~K  265 (430)
                        +.   +++.+|++..+.+++|.+.| +  +.+   + +++|+++++|++|. +|.    ..++....  |+++.  .|
T Consensus       216 ~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~l--sK  293 (474)
T PLN02624        216 KIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVIL--GK  293 (474)
T ss_pred             HHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEe--cc
Confidence              32   56788999889999999988 2  444   3 58999999999987 442    11222222  66665  59


Q ss_pred             cccC--CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610          266 NVGP--SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       266 ~~gp--~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l  343 (430)
                      .+|-  .-+|.+++++++++...+.           ..+.++ +.+...+.++.++|+.+.+ .   .+.++..++.+++
T Consensus       294 ~lggG~~pigav~~~~~i~~~~~~~-----------~~~~T~-~g~pl~~aaa~aaLe~l~~-~---~l~~~~~~~~~~l  357 (474)
T PLN02624        294 ALGGGVIPVSAVLADKDVMLCIKPG-----------EHGSTF-GGNPLASAVAMAALQVVQD-E---KLAERSAKLGQEL  357 (474)
T ss_pred             cccCCCCcceeeeecHHHHhHhccC-----------CcCCCC-CCCHHHHHHHHHHHHHHHh-c---hHHHHHHHHHHHH
Confidence            9963  2378888888876653221           011222 3566778888889987753 2   3555666666777


Q ss_pred             HHHHHccC-Cce-ecCCCCCCCccceEEEEcCCC----chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHH
Q 043610          344 YNVIDGSN-GFY-KCPVEKSVRSFMNVPFTLEKS----DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       344 ~~~l~~~~-G~~-~~~~~~~~rs~~iv~f~~~~~----~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~  417 (430)
                      ++.|.+.. .+. .+. +...+. .++.+.+...    ....++.+.|.++||++.++.  .+.|||++...++++||++
T Consensus       358 ~~~L~~l~~~~~~~i~-~vrg~G-~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~--~~~lR~~p~l~~t~e~id~  433 (474)
T PLN02624        358 RDQLQKIQKQFPKLIK-EVRGRG-LLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH--DTIIRLAPPLSISEDELQE  433 (474)
T ss_pred             HHHHHHHHHhCCCceE-EEEeeE-EEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC--CCEEEEECCccCCHHHHHH
Confidence            77666521 111 110 000122 2344444421    112268888999999987642  3579999988999999999


Q ss_pred             HHHHHHHHHHh
Q 043610          418 LVAFMKDFQAK  428 (430)
Q Consensus       418 ll~~L~~~~~~  428 (430)
                      +++.|+++++.
T Consensus       434 ~l~~L~~~l~~  444 (474)
T PLN02624        434 CSKALSDVLEH  444 (474)
T ss_pred             HHHHHHHHHHH
Confidence            99999998764

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.55  E-value=4.5e-13  Score=133.88  Aligned_cols=285  Identities=19%  Similarity=0.160  Sum_probs=173.2

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCC------CcEEEEEeCc
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQ------EYSVLFLQGG  142 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~------~~~vv~~~~g  142 (430)
                      ++.+.+-+++ +.+..++..+.....+.+  +.    ....++.+.++..++-+.+++++|.|.      +..-++ ++|
T Consensus        40 P~~~~~~~~~-~~~~~i~~~~l~~~~n~n--~~----~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~-t~G  111 (373)
T PF00282_consen   40 PRFFGFVPGG-PSPASILADLLASALNQN--GF----TWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVF-TSG  111 (373)
T ss_dssp             TTBESSSHT---CHHHHHHHHHHHHHT-B--TT----STTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEE-ESS
T ss_pred             hhHhhhccCC-ccHHHHHHHHHHhhhccc--cc----ccccccccccchHHHHHHHHHHhCCcccccccCCCceeE-ecc
Confidence            4566665555 345555555444433321  11    122367888888999999999999982      113444 578


Q ss_pred             HHHHHHHHHhhc----C----CCC-----CcEEEEeC-ChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c
Q 043610          143 ATTQFAAVPLNL----C----TPN-----DPVDYIVT-GSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q  205 (430)
Q Consensus       143 aT~a~~~~~~sl----~----~~g-----d~vl~~~~-g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i  205 (430)
                      +|+++...+...    .    ..|     +.++++.. .|++.  .+.+.-+| .++.|+.++   .+ ..|+++|+  +
T Consensus       112 gt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~--~Kaa~~lGlg~~~I~~~~---~~-~md~~~L~~~l  185 (373)
T PF00282_consen  112 GTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSI--EKAARILGLGVRKIPTDE---DG-RMDIEALEKAL  185 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THH--HHHHHHTTSEEEEE-BBT---TS-SB-HHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHH--HHhcceeeeEEEEecCCc---ch-hhhHHHhhhhh
Confidence            999987654432    1    012     23444443 56653  34555668 788888764   23 46877775  2


Q ss_pred             C----C-C-ccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--c------cccccccEEEeCCCcccc
Q 043610          206 N----P-D-AKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--P------VDVTRFGVIYAGAQKNVG  268 (430)
Q Consensus       206 ~----~-~-~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~------idl~~~d~~~~s~~K~~g  268 (430)
                      .    . . +-+|+.+...|.+|.+-|  +|.++ +++++|++||++++....  |      ..++..|.+..++|||++
T Consensus       186 ~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~  265 (373)
T PF00282_consen  186 EKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLG  265 (373)
T ss_dssp             HHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS
T ss_pred             cccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhc
Confidence            1    1 2 236777889999999988  78887 689999999998764222  1      124555899999999997


Q ss_pred             -CCccEEEEEcHH-HHhccCCCCCccccccc-----h--hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610          269 -PSGVTIVIVRKD-LLGNAQDKTPLMLDYKI-----H--DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK  339 (430)
Q Consensus       269 -p~G~g~l~v~~~-~~~~~~~~~p~~~~~~~-----~--~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l  339 (430)
                       |.++|+++++++ .+.......+.|+....     .  .......++. -+....+..+|+.+-. .|+.+..++..++
T Consensus       266 ~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~-~G~~~~i~~~~~~  343 (373)
T PF00282_consen  266 VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGR-EGYRERIRRCIEL  343 (373)
T ss_dssp             -SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred             CCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCH-HHHHHHHHHHHHH
Confidence             999999999875 33332211223332100     0  0001112344 2344555566666553 4899999999999


Q ss_pred             HHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          340 AELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       340 ~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                      ++++++.|++..+++++. ++   ...+|+|+++
T Consensus       344 a~~l~~~l~~~~~~el~~-~~---~~~~vcFr~k  373 (373)
T PF00282_consen  344 ARYLADRLRKDPRFELVN-EP---DLNIVCFRYK  373 (373)
T ss_dssp             HHHHHHHHHTSTTEEESS-TT---SSSEEEEEES
T ss_pred             HHHHHHHHHhCCCEEEEc-CC---CceEEEEEeC
Confidence            999999999877888873 22   3357999863

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.54  E-value=7.2e-14  Score=139.35  Aligned_cols=259  Identities=17%  Similarity=0.138  Sum_probs=162.3

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+.++++.+|++||++   +.+|+++|+|.++.+++.++++|||.|++-.+.|-+..  ......| .++++... ..+
T Consensus        66 G~I~eAe~~aA~~fGAd---~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~--~alil~ga~Pvyi~p~-~~~  139 (417)
T PF01276_consen   66 GIIKEAEELAARAFGAD---KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY--NALILSGAIPVYIPPE-DNE  139 (417)
T ss_dssp             THHHHHHHHHHHHHTES---EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH--HHHHHHTEEEEEEEEE-E-T
T ss_pred             cHHHHHHHHHHHhcCCC---eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH--HHHHHcCCeEEEecCC-ccc
Confidence            57889999999999998   56788899999999999999999999999888876632  2233346 78777664 223


Q ss_pred             CC--CCCCc-----cccc--c--CCCccE---EEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcC--CCCccccc
Q 043610          194 YT--KIPNF-----DALE--Q--NPDAKY---LHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNF--CSKPVDVT  254 (430)
Q Consensus       194 ~g--~~~d~-----~~l~--i--~~~~~l---v~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~--G~~~idl~  254 (430)
                      +|  ..+++     +.++  +  .|+.+.   |++++ .|..|++.|  +|.++ +++++.++||++|..  +..++.-+
T Consensus       140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~-PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~  218 (417)
T PF01276_consen  140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTS-PTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRS  218 (417)
T ss_dssp             TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEES-S-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTT
T ss_pred             cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeC-CCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccc
Confidence            44  12444     3443  2  466554   88876 677899999  78885 789999999998752  22232211


Q ss_pred             c----cc-------EEEeCCCccc-cCCccEEEEEcHHH-Hhc--cCCCCCccccccchhhcCCCCCCccHHHHHHHHHH
Q 043610          255 R----FG-------VIYAGAQKNV-GPSGVTIVIVRKDL-LGN--AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLV  319 (430)
Q Consensus       255 ~----~d-------~~~~s~~K~~-gp~G~g~l~v~~~~-~~~--~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~a  319 (430)
                      .    .|       +++-|.||.+ +.+..+++.++.+. ++.  ++.    ++..       ....+|++..+..+..|
T Consensus       219 a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~----~l~~-------~~TTSPSY~lmASlD~a  287 (417)
T PF01276_consen  219 ALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNE----ALSM-------HQTTSPSYPLMASLDVA  287 (417)
T ss_dssp             CSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHH----HHHH-------HS-SS--HHHHHHHHHH
T ss_pred             hhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHH----HHHH-------HcCCChHHHHHHHHHHH
Confidence            1    26       9999999999 49999999998764 321  110    1110       01146788888888888


Q ss_pred             HHHH-HHhcCHHHHHHHHHHHHHHHHHHH---HccCCceecCC---CCC----------------------CCccceEEE
Q 043610          320 FEYL-LELGGLNEVEKMNRKKAELLYNVI---DGSNGFYKCPV---EKS----------------------VRSFMNVPF  370 (430)
Q Consensus       320 l~~l-~~~~g~~~v~~~~~~l~~~l~~~l---~~~~G~~~~~~---~~~----------------------~rs~~iv~f  370 (430)
                      .+++ ... | ++..++..+++..+|+.|   .+..+++++..   ...                      ..-|+-+++
T Consensus       288 ~~~m~~~~-G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti  365 (417)
T PF01276_consen  288 RAQMEEEE-G-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTI  365 (417)
T ss_dssp             HHHHSHHH-H-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEE
T ss_pred             HHHHhhhh-h-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEE
Confidence            8877 432 3 566777777778888888   44556666531   110                      012445666


Q ss_pred             EcCC---------CchhH-HHHHHHHHcCCeec
Q 043610          371 TLEK---------SDLEA-EFVKEAAKEKMVQL  393 (430)
Q Consensus       371 ~~~~---------~~~~~-~~~~~L~~~Gi~~~  393 (430)
                      .+|+         .+.+. .+.+.|+++||.+-
T Consensus       366 ~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~E  398 (417)
T PF01276_consen  366 NTPGIDADGELSELGIPGYIVEKYLREHGIQVE  398 (417)
T ss_dssp             E-STBETTSSB-SS---HHHHHHHHHHTTEE-S
T ss_pred             EccCcCcCCcccccCCCHHHHHHHHHHcCCEEE
Confidence            6642         23455 57778888898864

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK15029 arginine decarboxylase; Provisional

Probab=99.53  E-value=2.1e-12  Score=137.69  Aligned_cols=294  Identities=11%  Similarity=-0.003  Sum_probs=186.8

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+.++++..|++||++.   ..|+++|+|.++.+++++++++||.|++-.+.|-|..  ......| .++++.... ++
T Consensus       205 G~I~eAq~~aA~~fgA~~---t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~--~al~L~ga~Pvyl~P~~-~~  278 (755)
T PRK15029        205 GAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE--QGLILTGAKPVYMVPSR-NR  278 (755)
T ss_pred             cHHHHHHHHHHHHhCCCc---EEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH--HHHHHcCCeEEEecccc-cc
Confidence            567899999999999974   5677799999999999999999999999888876531  2222346 777775432 23


Q ss_pred             CCC--CCC-----ccccc--c--CCCcc--------EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcC--CC-
Q 043610          194 YTK--IPN-----FDALE--Q--NPDAK--------YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNF--CS-  248 (430)
Q Consensus       194 ~g~--~~d-----~~~l~--i--~~~~~--------lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~--G~-  248 (430)
                      +|-  .++     ++.++  +  .|+++        +|++++ .|..|++.|  +|.++ +++++.++||++|..  +. 
T Consensus       279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~-PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~  357 (755)
T PRK15029        279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN-CTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN  357 (755)
T ss_pred             cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEEC-CCCcceeeCHHHHHHHHHhcCCeEEEECccccccccC
Confidence            441  233     44444  2  45555        888876 677899999  78775 789999999998752  11 


Q ss_pred             --Cc--ccc-------cccc-EEEeCCCccc-cCCccEEEEEcHH--HHhccCCCCCccccccchhhcCCCCCCccHHHH
Q 043610          249 --KP--VDV-------TRFG-VIYAGAQKNV-GPSGVTIVIVRKD--LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCI  313 (430)
Q Consensus       249 --~~--idl-------~~~d-~~~~s~~K~~-gp~G~g~l~v~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~  313 (430)
                        .|  --+       ...| +++-|.||.+ +.+..+++.++.+  .++.-  ....++..       ....+|++..+
T Consensus       358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~--r~~~~l~~-------~qSTSPSY~Lm  428 (755)
T PRK15029        358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFS--RFNQAYMM-------HATTSPLYAIC  428 (755)
T ss_pred             ccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHH--HHHHHHHH-------HcCCCcHHHHH
Confidence              12  112       2236 8999999999 4888899888543  22210  00001100       01146777788


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC-----------------------------------------
Q 043610          314 YMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG-----------------------------------------  352 (430)
Q Consensus       314 ~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-----------------------------------------  352 (430)
                      +.+..|-+++....| +...++..+++..+++.+.+..+                                         
T Consensus       429 ASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  507 (755)
T PRK15029        429 ASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQ  507 (755)
T ss_pred             HHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhcccc
Confidence            888888887763224 55667777777788888865433                                         


Q ss_pred             -ceecCCCCC------------CCccceEEEEcCCCch---------hH-HHHHHHHHcCCeecCCCCCCCeeEEeecCC
Q 043610          353 -FYKCPVEKS------------VRSFMNVPFTLEKSDL---------EA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNA  409 (430)
Q Consensus       353 -~~~~~~~~~------------~rs~~iv~f~~~~~~~---------~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~  409 (430)
                       +.++..+.+            ..-++-+++.+++.+.         .+ ++.+.|.++||.+-...  ...+=+=+...
T Consensus       508 ~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~--~~~vL~l~s~g  585 (755)
T PRK15029        508 DCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT--DFQIMFLFSMG  585 (755)
T ss_pred             ceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC--CCeEEEEeCCC
Confidence             222210000            0123445565543222         22 57778888899874321  11233333445


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 043610          410 MPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       410 ~t~edv~~ll~~L~~~~~  427 (430)
                      ++++++++|+++|+++.+
T Consensus       586 ~t~~~~~~L~~aL~~~~~  603 (755)
T PRK15029        586 VTRGKWGTLVNTLCSFKR  603 (755)
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            699999999999998744

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.53  E-value=9.8e-13  Score=131.70  Aligned_cols=272  Identities=16%  Similarity=0.151  Sum_probs=163.3

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH--HHH-HHHHHhC-CceEEecCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD--KAF-KEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~--~~~-~~a~~~g-~~~~v~~~~~  191 (430)
                      ..++.++.++++.|.+.   .+++ +||+.|+.+++.+++++||+|++... .|+.  .+. ....+.| ++.++...+ 
T Consensus        65 ~~~~lE~~la~leg~~~---av~~-sSG~aAi~~al~all~~GD~Vl~~~~-~yg~t~~~~~~~~~~~Gi~v~fvd~~~-  138 (384)
T PRK06434         65 TVQAFEEKYAVLENAEH---ALSF-SSGMGAITSAILSLIKKGKRILSISD-LYGQTFYFFNKVLKTLGIHVDYIDTDR-  138 (384)
T ss_pred             hHHHHHHHHHHHhCCCc---EEEe-CCHHHHHHHHHHHHhCCCCEEEEecC-ccchHHHHHHHHHHhcCcEEEEECCCC-
Confidence            34577788999999863   4554 68899999999999999999987543 3332  222 3445567 766665421 


Q ss_pred             CcCCCCCCccccccCC-CccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCc
Q 043610          192 EKYTKIPNFDALEQNP-DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQK  265 (430)
Q Consensus       192 ~~~g~~~d~~~l~i~~-~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K  265 (430)
                              .+.+++++ ++++|++.++.|+++.+.|  +|+++ ++++  ++||++++.+..  |++. ..|++++|.+|
T Consensus       139 --------~~~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl~~-gaDivv~S~tK  207 (384)
T PRK06434        139 --------LNSLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPLDL-GADVVIHSATK  207 (384)
T ss_pred             --------hhheeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCchhc-CCCEEEeeccc
Confidence                    12233444 6999999999999999999  78886 6777  567999754433  4543 24899999999


Q ss_pred             cc-cCCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          266 NV-GPSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       266 ~~-gp~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      ++ |+.+  -|.++.++ ++.+++..       +.   .  ......+...   +...++.+   .-++.+.++..+.+.
T Consensus       208 ~i~G~~d~~gG~vv~~~~~~~~~~~~-------~~---~--~~G~~~~~~~---A~l~~~gL---~tL~~R~~r~~~~a~  269 (384)
T PRK06434        208 YISGHSDVVMGVAGTNNKSIFNNLVE-------RR---K--TLGSNPDPIQ---AYLALRGL---KTLGLRMEKHNKNGM  269 (384)
T ss_pred             ccCCCCCceEEEEecCcHHHHHHHHH-------HH---H--hcCCCCCHHH---HHHHHhCC---CcHHHHHHHHHHHHH
Confidence            99 4653  35555543 44333211       00   0  0111222222   22222322   246788888899999


Q ss_pred             HHHHHHHccCCceec--CC----CC-CCCccceEEEEcCCCchhH-HHHHHHHH--cCCe-------e-cC---CCC---
Q 043610          342 LLYNVIDGSNGFYKC--PV----EK-SVRSFMNVPFTLEKSDLEA-EFVKEAAK--EKMV-------Q-LK---GHR---  397 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~--~~----~~-~~rs~~iv~f~~~~~~~~~-~~~~~L~~--~Gi~-------~-~~---g~~---  397 (430)
                      .+.++|++.+.+.-+  |.    .. -....++++|.+++ .... +|++.|+-  .++-       + .+   .+.   
T Consensus       270 ~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~  348 (384)
T PRK06434        270 ELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLS  348 (384)
T ss_pred             HHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC-HHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCC
Confidence            999999875443211  10    00 01134678999874 1111 45555431  1110       0 01   111   


Q ss_pred             ---------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          398 ---------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       398 ---------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                               ..+-||+|++.    ||++.|++-|++.++
T Consensus       349 ~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~  383 (384)
T PRK06434        349 PEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS  383 (384)
T ss_pred             HHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence                     13469999996    677777777776654

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.53  E-value=2.3e-12  Score=130.71  Aligned_cols=309  Identities=9%  Similarity=0.010  Sum_probs=183.9

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-----
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-----  155 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-----  155 (430)
                      -+|.|.+++.+.+.+....+.     ....    +...++.+.|+++++.  + +++++ +||++|++.++...-     
T Consensus        56 ~~p~v~~A~~~~~~~~~~~~~-----~~~~----~~~~~la~~l~~~~~~--~-~v~~~-~sGseA~e~Alk~ar~~~~~  122 (406)
T PRK12381         56 AHPALREALNEQASKFWHTGN-----GYTN----EPVLRLAKKLIDATFA--D-RVFFC-NSGAEANEAALKLARKYAHD  122 (406)
T ss_pred             CCHHHHHHHHHHHhhcccccC-----ccCC----HHHHHHHHHHHhhCCC--C-eEEEc-CCcHHHHHHHHHHHHHHHhh
Confidence            378999999998865322111     0111    2234677788887653  3 67775 789999998876531     


Q ss_pred             ---CCCCcEEEEeCChhHHHHHHHHHHh-CCceEE----ecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc-c
Q 043610          156 ---TPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI----WSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV-E  224 (430)
Q Consensus       156 ---~~gd~vl~~~~g~~~~~~~~~a~~~-g~~~~v----~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~-~  224 (430)
                         ..+.+|+.++.++.|.-.  .+... +.....    +...+...-...|+++++  +.+++++|++. +.+++|- .
T Consensus       123 ~~~~~r~~ii~~~~~yHG~t~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiE-Pv~~~gg~~  199 (406)
T PRK12381        123 RYGSHKSGIVAFKNAFHGRTL--FTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVE-PIQGEGGVI  199 (406)
T ss_pred             cCCCCCCeEEEECCCcCCcch--hHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEEe-CCcCCCCCc
Confidence               134567767766655321  11122 221110    000000000123556666  56678888875 5555554 4


Q ss_pred             C-C-----CCccc-cCCCcEEEEeccCc-CCCC--cccccc----ccEEEeCCCccccCCc--cEEEEEcHHHHhccCCC
Q 043610          225 F-K-----EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR----FGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       225 ~-p-----ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~----~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~  288 (430)
                      . |     +|.++ +++|+++++|++|. +|..  .+-...    .|+  .+..|.+| .|  +|++..++++++.+.+.
T Consensus       200 ~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~-gG~~ig~~~~~~~~~~~~~~~  276 (406)
T PRK12381        200 PADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDV--LTTAKALG-GGFPIGAMLTTEKCASVMTVG  276 (406)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCE--EEehhhhh-CCCceEEEEEcHHHHhhcCCC
Confidence            3 3     35554 58999999999974 4321  111111    244  57789996 25  78899999987764321


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCCccce
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMN  367 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~i  367 (430)
                      .           ...+ ++.+...+.++.++|+.+.+    +++.++.+++.+++++.|.+.. .+.++. +..... ..
T Consensus       277 ~-----------~~~t-~~~~pl~~aaa~a~l~~l~~----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~vrg~G-l~  338 (406)
T PRK12381        277 T-----------HGTT-YGGNPLASAVAGKVLELINT----PEMLNGVKQRHDWFVERLNTINARYGLFS-EIRGLG-LL  338 (406)
T ss_pred             C-----------CCCC-CCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCEE-EEecCe-EE
Confidence            0           0112 24566778888888887652    3578888888999999888631 121111 111112 23


Q ss_pred             EEEEcCCC--chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          368 VPFTLEKS--DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       368 v~f~~~~~--~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.+++.  .....+.+.|.++||.+....  .+.+|+++...++++||+++++.|++++++
T Consensus       339 ~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g--~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~  399 (406)
T PRK12381        339 IGCVLNAEYAGKAKQISQEAAKAGVMVLIAG--PNVVRFAPALNISEEEITTGLDRFARACER  399 (406)
T ss_pred             EEEEecCchhhHHHHHHHHHHHCCcEEeeCC--CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence            44555431  122368888899999986421  247999999889999999999999988764

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.51  E-value=4e-12  Score=129.67  Aligned_cols=331  Identities=9%  Similarity=-0.000  Sum_probs=187.3

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+++.+......    .+...    +...++.+.|.+++...-+ .++|. +
T Consensus        40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----~~~~~----~~~~~la~~l~~~~p~~~~-~v~f~-~  109 (423)
T PRK05964         40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIF----AGFTH----EPAERLAQRLVALTPGGLD-HVFFS-D  109 (423)
T ss_pred             CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccc----cccCC----HHHHHHHHHHHHhCCCCCC-EEEEe-C
Confidence            344455555542     33478999999998864211000    00111    2233556667777642223 67765 7


Q ss_pred             cHHHHHHHHHhhc--C-----CCC-CcEEEEeCChhHHHHHHHHHHh-CC-------------ceEEecCCCCcCCCCCC
Q 043610          142 GATTQFAAVPLNL--C-----TPN-DPVDYIVTGSWGDKAFKEAQKF-CN-------------PQVIWSGKAEKYTKIPN  199 (430)
Q Consensus       142 gaT~a~~~~~~sl--~-----~~g-d~vl~~~~g~~~~~~~~~a~~~-g~-------------~~~v~~~~~~~~g~~~d  199 (430)
                      ||+||++.++.-.  .     .+| .+|+.+..++.|....  +... +.             +..++....  .....+
T Consensus       110 sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~--~ls~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~~~~  185 (423)
T PRK05964        110 SGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIG--TMSVGDRGGMHALYTPLLFEQVTAPFPPD--GYEQAT  185 (423)
T ss_pred             CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHH--HHhcCCCccccccccCcCCCCEEeCCCcc--hhHHHH
Confidence            8999999876542  1     123 4677777666553211  1111 11             111111100  000001


Q ss_pred             ccccc--c---CCCccEEEEee-cCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c--cccc--cccEE
Q 043610          200 FDALE--Q---NPDAKYLHICA-NETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P--VDVT--RFGVI  259 (430)
Q Consensus       200 ~~~l~--i---~~~~~lv~i~~-~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~--idl~--~~d~~  259 (430)
                      +++++  +   .+++.+|++-- +....|+..+      +|.++ +++|+++++|++|. +|-.  .  .+..  ..|++
T Consensus       186 ~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~  265 (423)
T PRK05964        186 LDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIM  265 (423)
T ss_pred             HHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCee
Confidence            34444  3   23455666643 3666788875      34454 58999999999985 5421  1  1111  12555


Q ss_pred             EeCCCcccc-C-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610          260 YAGAQKNVG-P-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR  337 (430)
Q Consensus       260 ~~s~~K~~g-p-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~  337 (430)
                      +  ..|+++ . ..+|.++.++++.+......+    .... ..+.+ ++.|..++.++.++++.+.+    +.+.++..
T Consensus       266 ~--~~K~l~gG~~p~~av~~~~~i~~~~~~~~~----~~~~-~~~~T-~~~np~~~aaa~a~l~~l~~----~~~~~~~~  333 (423)
T PRK05964        266 C--LSKGLTGGYLPLAATLCTAEIFEAFYSDDR----AKAF-MHSPS-YTANPLACAAANASLDLFED----EPVLERVA  333 (423)
T ss_pred             e--eehhhhcCcccceEEEEcHHHHHhhhcCCc----cccc-ccCCC-CCcCHHHHHHHHHHHHHHHh----cCHHHHHH
Confidence            4  459994 3 347889999998776432100    0000 00111 23577788888889997764    24667888


Q ss_pred             HHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc---hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHH
Q 043610          338 KKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD---LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAG  414 (430)
Q Consensus       338 ~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~---~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~ed  414 (430)
                      ++.+++++.|++..++..+. +....+ .++.+.+.+..   ...++.+.|.++||++.+.   .+.+|+++..++|++|
T Consensus       334 ~~g~~l~~~l~~l~~~~~i~-~vrg~G-l~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~---~~~lR~~p~l~~t~ed  408 (423)
T PRK05964        334 ALSAGLAEGLEPFRDLPGVA-DVRVLG-AIGAVELDRPVLERDGPALRAFALERGVLLRPL---GNTIYLMPPYIITAEE  408 (423)
T ss_pred             HHHHHHHHHHHhhccCCCeE-Eeeccc-EEEEEEeccCcchhHHHHHHHHHHHCCeEEEec---CCEEEEeCCcccCHHH
Confidence            88888888887642332211 111122 34556665422   1236888899999998642   1469999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 043610          415 VEKLVAFMKDFQAK  428 (430)
Q Consensus       415 v~~ll~~L~~~~~~  428 (430)
                      ||+++++|+++++.
T Consensus       409 Id~~v~~l~~al~~  422 (423)
T PRK05964        409 LDRITDAIVEVADE  422 (423)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998764

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.47  E-value=7.9e-12  Score=132.11  Aligned_cols=298  Identities=13%  Similarity=0.076  Sum_probs=186.1

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHH-HHHhC-CceEEecCCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKE-AQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~-a~~~g-~~~~v~~~~~~  192 (430)
                      ..+.++++..|++||++.   ..|+++|+|.++.+++.+++++||.|++-.|.|-|.  +.- ....| .++++...-+ 
T Consensus       174 G~i~eAq~~AA~~fgAd~---tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv--~hgaLiLsGa~PVYl~P~~n-  247 (720)
T PRK13578        174 GAAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSN--HHGALIQAGATPVYLETARN-  247 (720)
T ss_pred             hHHHHHHHHHHHHhCCCc---eEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHH--HHHHHHHcCCeEEEeecccc-
Confidence            567799999999999974   566779999999999999999999999888887652  121 22346 7777765432 


Q ss_pred             cCCC--CCCccc-----cc--c--C-CC-------ccEEEEeecCCCccccCC--CCccc--cCCCcEEEEeccCc--CC
Q 043610          193 KYTK--IPNFDA-----LE--Q--N-PD-------AKYLHICANETIHGVEFK--EYPSA--KNSTGILVADMSSN--FC  247 (430)
Q Consensus       193 ~~g~--~~d~~~-----l~--i--~-~~-------~~lv~i~~~~t~tG~~~p--ei~~~--~~~g~~lvvD~a~s--~G  247 (430)
                      ++|-  .++.++     ++  +  . ++       .+++++++ .|..|++.+  +|.+.  +.++ .+++|+++.  ++
T Consensus       248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~-pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~  325 (720)
T PRK13578        248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQL-GTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQ  325 (720)
T ss_pred             ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEEC-CCCcceeecHHHHHHHhhccCC-cEEEeCcchhhhc
Confidence            3551  244444     43  2  2 22       57888875 677899999  77774  4667 899999864  22


Q ss_pred             CCcc--c-----cc-ccc----EEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCC--CCCccHHH
Q 043610          248 SKPV--D-----VT-RFG----VIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSL--YNTPPCYC  312 (430)
Q Consensus       248 ~~~i--d-----l~-~~d----~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~T~~~~~  312 (430)
                      ..|.  +     ++ ..|    +++-|.||.+ +.+..+++.++.+.++--..    +.+.....+....  ..+|+++.
T Consensus       326 F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~----~v~~~r~~~al~m~qSTSPsY~L  401 (720)
T PRK13578        326 FIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQAR----YCPHKRLNNAFMLHASTSPFYPL  401 (720)
T ss_pred             cCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccc----cCCHHHHHHHHHHHcCCChHHHH
Confidence            2231  1     11 125    8999999999 58888999887655431000    1111111111111  13566777


Q ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HccCCceecCCC-------------------------C--C---
Q 043610          313 IYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI-DGSNGFYKCPVE-------------------------K--S---  361 (430)
Q Consensus       313 ~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l-~~~~G~~~~~~~-------------------------~--~---  361 (430)
                      ++++..+-.++....| +...++..+++..+|+.| +...+++++..+                         +  .   
T Consensus       402 mASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whg  480 (720)
T PRK13578        402 FAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHG  480 (720)
T ss_pred             HHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccc
Confidence            7777777776654334 556677777778888888 444566654100                         0  0   


Q ss_pred             ---------CCccceEEEEcCCCc----------hhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHH
Q 043610          362 ---------VRSFMNVPFTLEKSD----------LEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       362 ---------~rs~~iv~f~~~~~~----------~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~  421 (430)
                               ..-++-+++..++..          ... .+.+.|.++||+.-...  ...+=+=+...++++++++|+++
T Consensus       481 f~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d--~~~vL~l~s~g~t~~~~~~Lv~a  558 (720)
T PRK13578        481 FEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD--LNSILFLLTPAEDMAKLQQLVAM  558 (720)
T ss_pred             cccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHH
Confidence                     012334455544311          114 67788878899864321  12233333334599999999999


Q ss_pred             HHHHHH
Q 043610          422 MKDFQA  427 (430)
Q Consensus       422 L~~~~~  427 (430)
                      |.++.+
T Consensus       559 L~~f~~  564 (720)
T PRK13578        559 LARFEK  564 (720)
T ss_pred             HHHHHH
Confidence            998743

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.47  E-value=1.3e-11  Score=120.64  Aligned_cols=320  Identities=14%  Similarity=0.109  Sum_probs=193.0

Q ss_pred             CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHH-HHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEF-KSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~-~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      .++.+.|.+|-+     --+|.++++++++.+..+.          .+.-| .+...++.+.|.++.+ ..| .|+|. +
T Consensus        41 G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h----------~sn~~~~~~~~~la~~L~~~s~-~~d-~vff~-N  107 (404)
T COG4992          41 GREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH----------VSNLFYNEPQAELAEKLVELSP-FAD-RVFFC-N  107 (404)
T ss_pred             CCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh----------cccccCChHHHHHHHHHHhhCc-ccc-EEEEc-C
Confidence            444555666653     3588999999998876332          22211 1333466677777776 343 67665 7


Q ss_pred             cHHHHHHHHHhhc--C-C-C-CCcEEEEeCChhHHHHHHHHHHhCCceEE----ecCCC---CcCCCCCCccccc--cCC
Q 043610          142 GATTQFAAVPLNL--C-T-P-NDPVDYIVTGSWGDKAFKEAQKFCNPQVI----WSGKA---EKYTKIPNFDALE--QNP  207 (430)
Q Consensus       142 gaT~a~~~~~~sl--~-~-~-gd~vl~~~~g~~~~~~~~~a~~~g~~~~v----~~~~~---~~~g~~~d~~~l~--i~~  207 (430)
                      |||||+++++.-.  . . + ..+++.+.+++.|.-... ....++..+-    |..+.   -+++   |+++++  +++
T Consensus       108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~ga-lS~t~~~ky~~~F~Pl~~g~~~vpfn---Di~al~~ai~~  183 (404)
T COG4992         108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGA-LSATGQPKYRKGFGPLLPGFRHVPFN---DIEALEAAIDE  183 (404)
T ss_pred             CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCcccee-eeccCChhhccCCCCCCCCceecCCC---CHHHHHHHhcc
Confidence            8999999886653  2 2 2 236666666654421100 0000111111    11000   0122   446676  788


Q ss_pred             CccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCcCCCC---ccccc--cc--cEEEeCCCcccc--CCc
Q 043610          208 DAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSNFCSK---PVDVT--RF--GVIYAGAQKNVG--PSG  271 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s~G~~---~idl~--~~--d~~~~s~~K~~g--p~G  271 (430)
                      +|..|++=-.....|++.+  +    +.++ .++|+++|+|++|.--..   -+-.+  ..  |++  +.-|.+|  .| 
T Consensus       184 ~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~--tlaK~LgGG~P-  260 (404)
T COG4992         184 DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDIL--TLAKALGGGFP-  260 (404)
T ss_pred             CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEE--EeeccccCCcc-
Confidence            9999999878888899988  2    4444 599999999999973221   11111  11  444  4568883  22 


Q ss_pred             cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      +|.++.++...+.+.   |.        ..++++| -|..+.++..++|+.+.+    +.+.++.+++.+++.+.|.+..
T Consensus       261 igA~la~~~~~~~~~---~G--------~HgSTfG-GNpLacAv~~a~l~~l~~----e~ll~~v~~~g~~~~~~L~~l~  324 (404)
T COG4992         261 IGAMLATEEIASAFT---PG--------DHGSTFG-GNPLACAVALAVLEVLLE----EGLLENVREKGEYLLQRLRELK  324 (404)
T ss_pred             ceeeEEchhhhhcCC---CC--------cccCCCC-cCHHHHHHHHHHHHHHcc----hhHHHHHHHHHHHHHHHHHHHh
Confidence            677777755444322   21        1234543 366677778889998764    4566667777777777777632


Q ss_pred             -CceecCCCCCCCccc-eEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          352 -GFYKCPVEKSVRSFM-NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       352 -G~~~~~~~~~~rs~~-iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       .+.++   .+.|.-+ .+-+.+.+.....++++.|.++|+.+....  ...+|+.+-...++||++..+++|++.+++
T Consensus       325 ~~~~~v---~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~--~~ViR~~PpL~i~~eei~~~~~~l~~~l~~  398 (404)
T COG4992         325 RRYPLV---KEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAG--PNVIRFLPPLVITEEEIDEALDALERALAA  398 (404)
T ss_pred             hcCCce---eeeecceeEEEEEecCcccHHHHHHHHHHCCeEEecCC--CCeEEecCCccCCHHHHHHHHHHHHHHHHH
Confidence             12222   2234332 233455431112379999999999987633  237999999999999999999999998875

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.47  E-value=2.9e-11  Score=122.81  Aligned_cols=331  Identities=11%  Similarity=0.060  Sum_probs=183.6

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEE
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFL  139 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~  139 (430)
                      ..++.+.+..|-     +--+|.|.+++.+++.+....  ..  ....    .+...++.+.|++++..+  .++.++|+
T Consensus        33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~--~~--~~~~----~~~~~~lae~l~~~~~~~~~~~~~~~f~  104 (412)
T TIGR02407        33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGII--HS--LDMA----TEAKREFLETFNEIILKPRGLDYKVQFP  104 (412)
T ss_pred             CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccce--ec--cccC----cHHHHHHHHHHHHhccCccCCCceEEEe
Confidence            344455555543     234789999999988641100  00  0000    122334555565654222  11246665


Q ss_pred             eCcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHH------H--hCC--ceEEecCCCCcCC--CCCCccccc-
Q 043610          140 QGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQ------K--FCN--PQVIWSGKAEKYT--KIPNFDALE-  204 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~------~--~g~--~~~v~~~~~~~~g--~~~d~~~l~-  204 (430)
                      ++||+||++.++.-.  .....+|+.+..++.|.-..-...      +  .+.  ..++....+ ++.  ..-+++.++ 
T Consensus       105 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~  183 (412)
T TIGR02407       105 GPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYD-GYLGGDVDTIAYFEK  183 (412)
T ss_pred             CCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCC-CccccchhHHHHHHH
Confidence            578999999876643  233456777777766642111110      0  110  011111100 000  001123344 


Q ss_pred             -cC------CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC----cccccc--ccEEEeCC
Q 043610          205 -QN------PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK----PVDVTR--FGVIYAGA  263 (430)
Q Consensus       205 -i~------~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~----~idl~~--~d~~~~s~  263 (430)
                       +.      +++.+|++--+.+..|++.+      +|.++ +++|+++|+|+++. +|-.    ..+...  -|+++.  
T Consensus       184 ~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~--  261 (412)
T TIGR02407       184 LLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCL--  261 (412)
T ss_pred             HHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEe--
Confidence             32      34567777666777888665      35554 68999999999986 4421    112112  266654  


Q ss_pred             CccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHH
Q 043610          264 QKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY-LLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       264 ~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~-l~~~~g~~~v~~~~~~l~  340 (430)
                      .|++|+.|  +|++++++++ +...+   ..        ...+ ++.|..+..++.++|+. +. +   +.+.++.+++.
T Consensus       262 ~K~lg~~G~pigav~~~~~~-~~~~~---~~--------~~~T-~~gnpl~~aaa~a~l~~~i~-~---~~l~~~~~~~g  324 (412)
T TIGR02407       262 SKSISGYGLPLALTLIKPEL-DVWKP---GE--------HNGT-FRGNNLAFVTATAALEYYWS-D---DAFEKAVQRKS  324 (412)
T ss_pred             chhccCCccceeEEEEchhh-hccCC---Cc--------cCCC-CCccHHHHHHHHHHHHHHhc-c---cHHHHHHHHHH
Confidence            59998767  8999998875 43211   00        1112 23455666677788884 43 2   35566667777


Q ss_pred             HHHHHHHHccC-Cce-ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610          341 ELLYNVIDGSN-GFY-KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       341 ~~l~~~l~~~~-G~~-~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l  418 (430)
                      +++++++++.. .+. .. .+..... ..+.+.+++.....++.+.+.++||.+.+.....+.||+++...++++|++++
T Consensus       325 ~~l~~~l~~l~~~~~~~~-~~vrg~G-l~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~  402 (412)
T TIGR02407       325 EIIQERLDRIVAEYPELI-KQVRGRG-LMQGIECGDGDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQG  402 (412)
T ss_pred             HHHHHHHHHHHhhCCCce-Eeeecce-eEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHH
Confidence            77777666421 011 11 1111122 34556776422233688889999999865322234799999999999999999


Q ss_pred             HHHHHHHHH
Q 043610          419 VAFMKDFQA  427 (430)
Q Consensus       419 l~~L~~~~~  427 (430)
                      ++.|++.++
T Consensus       403 ~~~l~~~l~  411 (412)
T TIGR02407       403 LDILEQAVE  411 (412)
T ss_pred             HHHHHHHHh
Confidence            999999875

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.46  E-value=1.2e-11  Score=126.17  Aligned_cols=326  Identities=13%  Similarity=0.087  Sum_probs=186.3

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +-.+|.|++++.+++.+.    .. +.  ...    ....++++.|++++... + +|+++ +
T Consensus        46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~----~~-~~--~~~----~~~~~lae~l~~~~~~~-~-~v~~~-~  111 (423)
T TIGR00713        46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG----TS-YG--APT----EAEILLAKEIISRVPSV-E-MVRFV-N  111 (423)
T ss_pred             CCCEEEEccccccccccCCCCHHHHHHHHHHHHhC----Cc-CC--CCC----HHHHHHHHHHHHhCCcc-c-EEEEe-C
Confidence            344455555553     245789999999988641    10 11  111    23346777888877644 3 77765 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCC--CCcCC---C---CCCccccc--cC-
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGK--AEKYT---K---IPNFDALE--QN-  206 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~--~~~~g---~---~~d~~~l~--i~-  206 (430)
                      ||++|++.++...  ...+++|+....++.+.. +.......+ .....+...  .....   .   ..|+++++  +. 
T Consensus       112 sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~  191 (423)
T TIGR00713       112 SGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEE  191 (423)
T ss_pred             CHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHH
Confidence            8999999876642  234578888877766632 111100011 110000000  00000   0   01455665  33 


Q ss_pred             --CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC-Cc-----cccccccEEEeCCCccccCC
Q 043610          207 --PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS-KP-----VDVTRFGVIYAGAQKNVGPS  270 (430)
Q Consensus       207 --~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~-~~-----idl~~~d~~~~s~~K~~gp~  270 (430)
                        +++++|++..+.+.+|.+.+      +|.++ +++|+++++|++|. +.. ..     .++ .-|+  .++.|.+| .
T Consensus       192 ~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~-~pDi--~t~sK~l~-~  267 (423)
T TIGR00713       192 YGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGV-EPDL--TTLGKIIG-G  267 (423)
T ss_pred             cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCC-Ccch--hhhhhhhc-C
Confidence              56788888545555898877      24444 58999999999985 211 01     111 1143  36899997 4


Q ss_pred             c--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          271 G--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       271 G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      |  +|+++.++++++.+.+....+.        +.+ +..+...+.++.++|+.+.+..-++.+.+....+++.+++.+.
T Consensus       268 G~pig~v~~~~~i~~~~~~~~~~~~--------~~T-~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~  338 (423)
T TIGR00713       268 GLPVGAFGGRREIMERLAPEGPVYQ--------AGT-LSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLE  338 (423)
T ss_pred             CCceeeeeEHHHHHHhhCcCCCeee--------ccC-CCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            5  7999999998876532111110        112 2456777888888999876432346666666667676776666


Q ss_pred             ccCCceecCCCCCCCccceEEEEcCCC-----------chh--HHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610          349 GSNGFYKCPVEKSVRSFMNVPFTLEKS-----------DLE--AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       349 ~~~G~~~~~~~~~~rs~~iv~f~~~~~-----------~~~--~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv  415 (430)
                      + .++....   ..+.. .+.+.+...           +..  ..+.+.|.++||.+..+  ..+.+|+++.  ++++|+
T Consensus       339 ~-~~~~~~v---~~~g~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~--~~~~~~l~~~--~t~~~i  409 (423)
T TIGR00713       339 D-TGIPHTV---NRVGS-MFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPS--QFEACFLSAA--HTEEDI  409 (423)
T ss_pred             h-cCCCeEE---Eeecc-EEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecC--CccceeeECC--CCHHHH
Confidence            5 3443211   01222 233333210           001  14777888899987542  1235888875  599999


Q ss_pred             HHHHHHHHHHHHh
Q 043610          416 EKLVAFMKDFQAK  428 (430)
Q Consensus       416 ~~ll~~L~~~~~~  428 (430)
                      +++++.|++++++
T Consensus       410 ~~~~~~l~~~l~~  422 (423)
T TIGR00713       410 ENTIEAAEEVFAE  422 (423)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998764

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.45  E-value=4.6e-11  Score=121.87  Aligned_cols=332  Identities=12%  Similarity=0.079  Sum_probs=181.9

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCC--CcEEEEE
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQ--EYSVLFL  139 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~--~~~vv~~  139 (430)
                      +.++.+.+..|-     +--+|.|.+++++++.+......    .....    ....++.+.|.+++..+.  ++.++|+
T Consensus        37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~~~~~----~~~~~lae~l~~~~~~~~~~~~~~~f~  108 (425)
T PRK09264         37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHG----LDMHT----TAKREFLETFEETILKPRGLDYKVQFT  108 (425)
T ss_pred             CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccc----cccCc----HHHHHHHHHHHHhhcCCcCCCceEEEe
Confidence            444555565553     23478999999998864110000    00011    223345555656543331  2256665


Q ss_pred             eCcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHH------H--hC----CceEEecCCCCcC-CCCCCccccc
Q 043610          140 QGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQ------K--FC----NPQVIWSGKAEKY-TKIPNFDALE  204 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~------~--~g----~~~~v~~~~~~~~-g~~~d~~~l~  204 (430)
                      ++||+||++.++.-.  .....+|+.+..++.|.-..-...      +  .+    .+..++...  .. ...-|+++++
T Consensus       109 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~~l~  186 (425)
T PRK09264        109 GPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDG--YFGGDVDTLAYLE  186 (425)
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCC--ccccchhHHHHHH
Confidence            578999999876543  233456776766665532111110      0  01    111122110  00 0001334454


Q ss_pred             --cC------CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC---C-ccccc--cccEEEeC
Q 043610          205 --QN------PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS---K-PVDVT--RFGVIYAG  262 (430)
Q Consensus       205 --i~------~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~---~-~idl~--~~d~~~~s  262 (430)
                        +.      +++.+|++--+....|++.+      +|.++ +++|+++|+|++|. +|-   . ..+..  +-|++++ 
T Consensus       187 ~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~-  265 (425)
T PRK09264        187 KLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTL-  265 (425)
T ss_pred             HHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEe-
Confidence              32      24556666556666677654      35554 58999999999985 331   1 11111  1266655 


Q ss_pred             CCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          263 AQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       263 ~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                       .|.+|+.|  +|++++++++ ....   +..        ...++ +.|..+..+..++++.+.+.   +.+.++.+++.
T Consensus       266 -~K~l~~~G~pigav~~~~~i-~~~~---~~~--------~~~T~-~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g  328 (425)
T PRK09264        266 -SKSISGYGLPMALVLIKPEL-DVWK---PGE--------HNGTF-RGNNLAFVTATAALEEYWSD---DAFEKEVKAKG  328 (425)
T ss_pred             -ccccCCCccceEEEEEchhh-hccC---CCc--------cCCCC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHH
Confidence             59998767  5999998876 3211   100        11222 34445566666777433322   35777777788


Q ss_pred             HHHHHHHHccC-CceecCCCCCCCc-cceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610          341 ELLYNVIDGSN-GFYKCPVEKSVRS-FMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       341 ~~l~~~l~~~~-G~~~~~~~~~~rs-~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l  418 (430)
                      +++++.|++.. .+..+.  ...|. ...+.+.+++.....++.+.+.++|+.+.+.......||+++...+|++||+++
T Consensus       329 ~~l~~~l~~l~~~~~~~~--~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~  406 (425)
T PRK09264        329 ELVRERLEEIAAKYPGLG--AEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEG  406 (425)
T ss_pred             HHHHHHHHHHHHhCCCce--ecceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHH
Confidence            88887776521 121110  11122 234556665422233688889999999865322235799999888999999999


Q ss_pred             HHHHHHHHHh
Q 043610          419 VAFMKDFQAK  428 (430)
Q Consensus       419 l~~L~~~~~~  428 (430)
                      ++.|++.++.
T Consensus       407 ~~~l~~~l~~  416 (425)
T PRK09264        407 LDILEEAVAE  416 (425)
T ss_pred             HHHHHHHHHH
Confidence            9999988753

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.44  E-value=9.8e-12  Score=118.22  Aligned_cols=348  Identities=16%  Similarity=0.137  Sum_probs=215.6

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHH-HHHHHHHhCCCCCcE-EEEEeCcHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKA-ESDLRALLNIPQEYS-VLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~-r~~la~l~g~~~~~~-vv~~~~gaT~  145 (430)
                      +.+.+.+.+..-.....|++++-..|.|=...|+-. .....+.+|.+.+|.+ ++...+.||.+++-. |-+-+-|++-
T Consensus        39 Q~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG-~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSP  117 (477)
T KOG2467|consen   39 QKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPG-ARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSP  117 (477)
T ss_pred             hhcceeEeecccchHHHHHHHHhHHhhcccccCCCc-ccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCc
Confidence            445666777777788899999999987644445421 1333467777666644 566668899976422 4444567899


Q ss_pred             HHHHHHhhcCCCCCcEEEEe---CChhHHHHHHHHHHhC-CceEE---ecCCCCcCCCCCCccccc---cCCCccEEEEe
Q 043610          146 QFAAVPLNLCTPNDPVDYIV---TGSWGDKAFKEAQKFC-NPQVI---WSGKAEKYTKIPNFDALE---QNPDAKYLHIC  215 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~---~g~~~~~~~~~a~~~g-~~~~v---~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~  215 (430)
                      |+.++..++++|+|+++=++   .|+.++......++.. .-.+.   |..-+...| .+|.|.|+   ..=++|+++.-
T Consensus       118 ANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~frPk~iiaG  196 (477)
T KOG2467|consen  118 ANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLFRPKLIIAG  196 (477)
T ss_pred             hhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhcCCcEEEec
Confidence            99999999999999987544   3444433221122221 11111   111111244 68888887   33456655543


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCc-----CCCCccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccC
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSN-----FCSKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQ  286 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s-----~G~~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~  286 (430)
                        .+..-..+|  .+.++ .+.|+++++|++|-     .|.+|-.++-.|+++.+.||.+ ||+| |+++.|+.....-.
T Consensus       197 --~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~  273 (477)
T KOG2467|consen  197 --TSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKP  273 (477)
T ss_pred             --cccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccccCCcc-eeEEEeccCCcCCC
Confidence              233344555  45555 47899999999874     4555656666699999999999 9999 88888875532211


Q ss_pred             C-CCCccccccchhhcC----CCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          287 D-KTPLMLDYKIHDENN----SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       287 ~-~~p~~~~~~~~~~~~----~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      + -.+...|+..-+ ++    ...|.|--..+.+++.||+..... .+.+-.++..+.++.+.++|.+ .|++++.-.. 
T Consensus       274 k~g~~i~ydlE~kI-NfaVFP~lQGGPHNhtIaalAvALkQa~tp-efk~Yq~qV~~Nakala~~l~~-~Gy~lvtgGT-  349 (477)
T KOG2467|consen  274 KQGKEILYDLEDKI-NFAVFPGLQGGPHNHTIAALAVALKQAMTP-EFKEYQKQVLKNAKALASALIS-RGYKLVTGGT-  349 (477)
T ss_pred             CCCCcceechhhhh-hhhccccccCCCCcchHHHHHHHHHhhCCH-HHHHHHHHHHHHHHHHHHHHHH-cCceEecCCc-
Confidence            1 112223332211 11    122444444677788888765432 4667777777888888899986 8999874211 


Q ss_pred             CCccceEEEEcCCCchhHHHHHH-HHHcCCee----cCCCC---CCCeeEEeecCCCC----HHHHHHHHHHHHHHH
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKE-AAKEKMVQ----LKGHR---SVGGMRASIYNAMP----LAGVEKLVAFMKDFQ  426 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~-L~~~Gi~~----~~g~~---~~g~iRis~~~~~t----~edv~~ll~~L~~~~  426 (430)
                        -++.+.+.+.+.+++..-+++ |+.-+|..    .+|..   ..|+|||+.-.-++    ++|.+++.++|.+.+
T Consensus       350 --DnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av  424 (477)
T KOG2467|consen  350 --DNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV  424 (477)
T ss_pred             --cceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence              124466677665666644444 44445553    34443   47899999765443    899999999888754

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.44  E-value=5.9e-12  Score=125.93  Aligned_cols=276  Identities=16%  Similarity=0.156  Sum_probs=165.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHH-HHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFK-EAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~-~a~~~g-~~~~v~~~~~  191 (430)
                      ...+.+++.|+++-|..   .++++ +||..|+.+++.+++++||+|++....|.+. ++.+ ...+.| ++.++..   
T Consensus        55 Pt~~~le~~la~Le~g~---~a~~~-~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~---  127 (386)
T PF01053_consen   55 PTVRALEQRLAALEGGE---DALLF-SSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP---  127 (386)
T ss_dssp             HHHHHHHHHHHHHHT-S---EEEEE-SSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST---
T ss_pred             ccHHHHHHHHHHhhccc---ceeec-cchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc---
Confidence            34557889999999985   45655 7899999999999999999998876655543 2322 244557 5544432   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCC-cEEEEeccCcC--CCCccccccccEEEeCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNST-GILVADMSSNF--CSKPVDVTRFGVIYAGA  263 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g-~~lvvD~a~s~--G~~~idl~~~d~~~~s~  263 (430)
                            -|+++++  +++++++|++=.+.||+..+.|  .|+++ +++| ++++||.+-+-  ...|+++. .|+++.|.
T Consensus       128 ------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL~~G-aDivv~S~  200 (386)
T PF01053_consen  128 ------TDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPLELG-ADIVVHSA  200 (386)
T ss_dssp             ------TSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GGGGT--SEEEEET
T ss_pred             ------hhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeeeccCcCC-ceEEEeec
Confidence                  3567776  7889999999999999999999  78886 6887 99999998543  33455443 58999999


Q ss_pred             CccccCCc---cEEEEEcH--HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610          264 QKNVGPSG---VTIVIVRK--DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK  338 (430)
Q Consensus       264 ~K~~gp~G---~g~l~v~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~  338 (430)
                      .|+++-.|   .|.+++++  ++.+.++.       +.  .   ....+++....+.+...|+      -+..+.++..+
T Consensus       201 TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~-------~~--~---~~G~~~~p~da~ll~rgl~------Tl~~R~~~~~~  262 (386)
T PF01053_consen  201 TKYLSGHSDVMGGAVVVNGSSELYDRLRE-------FR--R---LLGATLSPFDAWLLLRGLR------TLPLRMERQNE  262 (386)
T ss_dssp             TTTTTTSSSE-EEEEEESSHHHHHHHHHH-------HH--H---HHT-B--HHHHHHHHHHHT------THHHHHHHHHH
T ss_pred             cccccCCcceeeEEEEECchhhhhhhhcc-------hh--h---hcCccchHHHHHHHhcCCC------cHHHHHHHHHH
Confidence            99996444   56666654  45443311       00  0   0112444444443333332      46777888888


Q ss_pred             HHHHHHHHHHccCCceec--CC--CCC---------CCccceEEEEcCCCchhH-HHHHHHHH--cCCe--------ecC
Q 043610          339 KAELLYNVIDGSNGFYKC--PV--EKS---------VRSFMNVPFTLEKSDLEA-EFVKEAAK--EKMV--------QLK  394 (430)
Q Consensus       339 l~~~l~~~l~~~~G~~~~--~~--~~~---------~rs~~iv~f~~~~~~~~~-~~~~~L~~--~Gi~--------~~~  394 (430)
                      .+..+.++|++.+.+.-+  |.  +.+         ....++++|.+++..... +|++.|+-  .|.-        ..+
T Consensus       263 nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p  342 (386)
T PF01053_consen  263 NAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISHP  342 (386)
T ss_dssp             HHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEET
T ss_pred             HHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCcccccccc
Confidence            889999999985544421  21  111         012358899998621111 46666542  1111        111


Q ss_pred             C---CC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          395 G---HR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       395 g---~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .   +.            ..+.||+|++.    ||++.|++-|+..+
T Consensus       343 ~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL  385 (386)
T PF01053_consen  343 ASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQAL  385 (386)
T ss_dssp             TCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHH
T ss_pred             cchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhc
Confidence            1   11            13469999996    77777777777655

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.43  E-value=3.6e-12  Score=118.15  Aligned_cols=274  Identities=16%  Similarity=0.161  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-CCCCcEEEEeCChhHHHHHH--HHHHhC-CceEEecCCCCc
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-TPNDPVDYIVTGSWGDKAFK--EAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-~~gd~vl~~~~g~~~~~~~~--~a~~~g-~~~~v~~~~~~~  193 (430)
                      .++++..|+++|...   -+|++ |||.++.+.++.-+ ++|.++++=+..+. +.|-+  ++...| .++.+...   +
T Consensus        59 ~rLE~~vA~l~GKEA---gLFv~-SGTmgNllaIm~Hc~~rg~eii~gd~~HI-~~~E~gg~s~l~gv~~~tv~~e---~  130 (384)
T KOG1368|consen   59 NRLEQRVAELFGKEA---GLFVP-SGTMGNLLAIMVHCHQRGSEIIVGDRAHI-HRYEQGGISQLAGVHVRTVKNE---N  130 (384)
T ss_pred             HHHHHHHHHHhCccc---eeeec-ccccccHHHHHHHhcCCCceEEeccchhe-eehhccChhhhccceeEeeeeC---C
Confidence            478899999999875   36664 67899887777755 68888875332221 22311  122224 44444432   2


Q ss_pred             CCCCCCccccc--cC--------CCccEEEEeecCCCcc-ccCC--C---Cccc-cCCCcEEEEeccCcCC---CCcccc
Q 043610          194 YTKIPNFDALE--QN--------PDAKYLHICANETIHG-VEFK--E---YPSA-KNSTGILVADMSSNFC---SKPVDV  253 (430)
Q Consensus       194 ~g~~~d~~~l~--i~--------~~~~lv~i~~~~t~tG-~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~~idl  253 (430)
                      .| ..++++++  +.        |-|++|++-+-++.+| .+.|  +   +.++ +++|+-+++|++--|-   +..+.+
T Consensus       131 dg-tm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~v  209 (384)
T KOG1368|consen  131 DG-TMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPV  209 (384)
T ss_pred             CC-eeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCH
Confidence            34 46888887  32        3489999977666666 8999  3   4444 6999999999964222   122344


Q ss_pred             cc----ccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHH--HHHHHHHHh
Q 043610          254 TR----FGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCG--LVFEYLLEL  326 (430)
Q Consensus       254 ~~----~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~--~al~~l~~~  326 (430)
                      ++    +|.+..+++|.+| |-| .+++.+++++++.+-     +  +.     ...|..-..++.+++  .+|+.-.. 
T Consensus       210 k~i~~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA~~-----~--RK-----alGGGmRQsGvLaaaaLval~~~~~-  275 (384)
T KOG1368|consen  210 KKICSAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKARH-----F--RK-----ALGGGMRQSGVLAAAALVALDENVP-  275 (384)
T ss_pred             HHHHHhhhhhhhhhhccCCCCcc-cEEEccHHHHHHHHH-----H--HH-----HhcCchhHHHHHHHHHHHHhhcchH-
Confidence            43    4788899999997 988 788889999887421     0  00     011222223333322  23322110 


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCCCCeeEEe
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRAS  405 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis  405 (430)
                       -+...+++..    .+.+.+....++++-.  +...++ ++.+.+....+.. ++.+.|.+.||....|..  ..+||.
T Consensus       276 -~L~~dHk~A~----~lAe~~~~~~~i~v~v--~a~etN-iv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s--~r~Riv  345 (384)
T KOG1368|consen  276 -LLRADHKRAK----ELAEYINTPEEIRVEV--PAVETN-IVNMVLCQARLTAEELCKFLEKNGILLMGGAS--RRIRIV  345 (384)
T ss_pred             -HHHHHHHHHH----HHHHHhccccceeeec--chhhcc-eeeeecccccCCHHHHHHHHHHCCeEEeeccc--cceEEE
Confidence             1233344444    4444554423365531  222343 3334444334555 799999999999876532  259999


Q ss_pred             ecCCCCHHHHHHHHHHHHH
Q 043610          406 IYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       406 ~~~~~t~edv~~ll~~L~~  424 (430)
                      +++..+.++++.++.+|++
T Consensus       346 lh~Qvt~~~ve~~~~~~~k  364 (384)
T KOG1368|consen  346 LHHQVTDEDVEYVKSVLSK  364 (384)
T ss_pred             EEEecCHHHHHHHHHHHHH
Confidence            9999999999999999954

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.42  E-value=2e-11  Score=128.96  Aligned_cols=289  Identities=12%  Similarity=0.038  Sum_probs=184.0

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+.++++..|++||++.   ..|+++|+|.++.+++.+++++||.|++-.+.|-|.  +......| .++++....+ .
T Consensus       195 G~i~eAe~~AA~~fgAd~---tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv--~haLilsga~PVYl~P~rn-~  268 (714)
T PRK15400        195 GPHKEAEEYIARVFNADR---SYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSL--THLMMMSDVTPIYFRPTRN-A  268 (714)
T ss_pred             hHHHHHHHHHHHHhCCCc---EEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHH--HHHHHHcCCeEEEeccccc-c
Confidence            567799999999999984   566779999999999999999999999888887663  22223346 7777765432 4


Q ss_pred             CCC--CCC-----ccccc--c--CCCcc---EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcC--CCCcc--c
Q 043610          194 YTK--IPN-----FDALE--Q--NPDAK---YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNF--CSKPV--D  252 (430)
Q Consensus       194 ~g~--~~d-----~~~l~--i--~~~~~---lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~--G~~~i--d  252 (430)
                      +|-  .++     .+.++  +  .|+.+   .+++++ .|..|++.+  +|.+. +.++  +++|+++..  ...|.  +
T Consensus       269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~-pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~  345 (714)
T PRK15400        269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITN-STYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEG  345 (714)
T ss_pred             cCCccCCCccccCHHHHHHHHHhCccccCccEEEEEC-CCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCC
Confidence            542  234     34443  2  45544   677765 588999999  67774 5555  689998652  11221  1


Q ss_pred             cccc-------c--EEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCC--CCCCccHHHHHHHHHHH
Q 043610          253 VTRF-------G--VIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNS--LYNTPPCYCIYMCGLVF  320 (430)
Q Consensus       253 l~~~-------d--~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~T~~~~~~~a~~~al  320 (430)
                      ...+       |  +++-|.||.+ |.+..+++.++.. ++.           ....+...  ...+|+++.++++..+.
T Consensus       346 ~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~-----------~~~n~a~~m~~STSPsY~l~ASLD~a~  413 (714)
T PRK15400        346 KCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNE-----------ETFNEAYMMHTTTSPHYGIVASTETAA  413 (714)
T ss_pred             cChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCH-----------HHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence            1111       4  8999999999 5887777755332 110           00000001  11357777777788888


Q ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC------ceecCCCC-------------------------CCCccceEE
Q 043610          321 EYLLELGGLNEVEKMNRKKAELLYNVIDGSNG------FYKCPVEK-------------------------SVRSFMNVP  369 (430)
Q Consensus       321 ~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G------~~~~~~~~-------------------------~~rs~~iv~  369 (430)
                      .++....| +...++..+++..+|+.|.+..+      |+++..+.                         -..-+.-++
T Consensus       414 ~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klt  492 (714)
T PRK15400        414 AMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVT  492 (714)
T ss_pred             HHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEE
Confidence            77753234 56777777888888888876555      55442110                         001334455


Q ss_pred             EEcCC---------CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          370 FTLEK---------SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       370 f~~~~---------~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +..++         .+... .+.+.|.++||+.-...  ...+=+-+...+|++++++|+++|.++.+
T Consensus       493 i~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d--~~~iLfl~s~g~t~~~~~~L~~aL~~f~~  558 (714)
T PRK15400        493 LLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG--PYNLLFLFSIGIDKTKALSLLRALTDFKR  558 (714)
T ss_pred             EEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            55544         23445 57778988999975321  22344455556699999999999998743

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.39  E-value=8.7e-12  Score=121.59  Aligned_cols=317  Identities=13%  Similarity=0.107  Sum_probs=199.5

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      .+-|..+-.+..+.+.+++..+-..   .+.|..+.     .-.+...++++.+|+++|.++  -++|.+|  ...+...
T Consensus       146 YLGFa~~~g~ca~~~~~~~~kygl~---~css~~e~-----G~~~~hkelE~l~A~f~g~e~--a~vF~mG--f~TNs~~  213 (519)
T KOG1357|consen  146 YLGFAQSVGPCAEASLKSFDKYGLS---RCSSRHEA-----GTTEEHKELEELVARFLGVED--AIVFSMG--FATNSMN  213 (519)
T ss_pred             cccccccCCcCChHHHHHHHHhccc---ccccchhc-----ccHHHHHHHHHHHHHhcCCcc--eEEEecc--ccccccC
Confidence            3336667778888999998876321   22222222     234667799999999999987  4677554  5555666


Q ss_pred             HhhcCCCCCcEEEEeCChhHHHHHHH-HHHhC-CceEEecCCCCcCCCCCCcccc-c-----cCCCc-----cEEEEee-
Q 043610          151 PLNLCTPNDPVDYIVTGSWGDKAFKE-AQKFC-NPQVIWSGKAEKYTKIPNFDAL-E-----QNPDA-----KYLHICA-  216 (430)
Q Consensus       151 ~~sl~~~gd~vl~~~~g~~~~~~~~~-a~~~g-~~~~v~~~~~~~~g~~~d~~~l-~-----i~~~~-----~lv~i~~-  216 (430)
                      +.+++.||.-++.   +...+..+.. ++..| .+++..      ++..-|++.+ .     -+|+|     |++.+.- 
T Consensus       214 ~p~l~~~gsLIiS---DelNHaSi~~GaRLSgAtiRVfk------HNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iiveg  284 (519)
T KOG1357|consen  214 IPSLLGKGSLIIS---DELNHASLITGARLSGATTRVFR------HNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEG  284 (519)
T ss_pred             cceeecCCcceee---ccccchheeccccccCceEEEEe------cCCHHHHHHHHHHHHhcCCCCcCCcchheeeeecc
Confidence            7788888766553   2222221222 22235 443332      2223344432 1     24544     2333332 


Q ss_pred             cCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc-----------cccccccEEEeCCCccccCCccEEEEEcHHHH
Q 043610          217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP-----------VDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLL  282 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~-----------idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~  282 (430)
                      ..+.-|.+.+  ++.++ +++.+++++|++|++|++.           +|-++.|++.+.+-|.+|-.| |++..+++++
T Consensus       285 iysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G-Gyiagsk~li  363 (519)
T KOG1357|consen  285 IYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG-GYIAGSKELI  363 (519)
T ss_pred             ceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc-ceecCcHHHH
Confidence            2334566665  77777 6899999999999999872           456677899999999999888 9999999999


Q ss_pred             hccCCCCCccccccchhhcCCCCC-CccHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYN-TPPCYCIYMCGLVFEYLLEL---GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV  358 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~-T~~~~~~~a~~~al~~l~~~---~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~  358 (430)
                      +..+...+..           .+. +.+.+.+.....+++.+..+   ..-+.+.+++++.+.+++..+.. .||.++..
T Consensus       364 d~lrt~s~~~-----------~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~-~gfivyG~  431 (519)
T KOG1357|consen  364 DYLRTPSPSA-----------LYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQK-MGFIVYGN  431 (519)
T ss_pred             hhhccCCCce-----------eecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhc-CcEEEecC
Confidence            8764322211           112 22333333344556554311   13577888899999999999996 89988753


Q ss_pred             CCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC-CCC----CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK-GHR----SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +   .|+ ++++-+-....-..+.++|.++++.++- |..    -.+..|++....++.|+++++++.+.+.
T Consensus       432 ~---dSp-Vvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~  499 (519)
T KOG1357|consen  432 N---DSP-VVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV  499 (519)
T ss_pred             C---CCC-cceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence            2   244 3443332212233688788888666432 322    2457899999999999999999998765

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.38  E-value=2.2e-10  Score=115.77  Aligned_cols=318  Identities=10%  Similarity=0.060  Sum_probs=181.1

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.|..|-     +--.|.|.+++.+.+.+... +..   ..     ..+...++.+.|.+..+  .+ +++|+ +
T Consensus        34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~-~~~---~~-----~~~~~~~la~~l~~~~~--~~-~v~f~-~  100 (395)
T PRK03715         34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLIN-PSP---AF-----YNEPMAKLAGLLTQHSC--FD-KVFFA-N  100 (395)
T ss_pred             CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccc-ccc---cc-----cCHHHHHHHHHHhhccC--CC-EEEEe-C
Confidence            344555555432     22378999999998764211 110   00     11222234444444322  23 67775 7


Q ss_pred             cHHHHHHHHHhhcC------CCC-CcEEEEeCChhHHHHHHHHHHhCCce----EEecCCCCcCC--CCCCccccc--cC
Q 043610          142 GATTQFAAVPLNLC------TPN-DPVDYIVTGSWGDKAFKEAQKFCNPQ----VIWSGKAEKYT--KIPNFDALE--QN  206 (430)
Q Consensus       142 gaT~a~~~~~~sl~------~~g-d~vl~~~~g~~~~~~~~~a~~~g~~~----~v~~~~~~~~g--~~~d~~~l~--i~  206 (430)
                      ||++|++.++....      ++| .+++.++.++.|.-. ......+...    ..+...  .+.  ...|+++++  +.
T Consensus       101 SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~  177 (395)
T PRK03715        101 SGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTL-ATMSASGKPGWDTIFAPQVP--GFPKAELNDIASVEKLIT  177 (395)
T ss_pred             CcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChH-HHHhhcCCcccccCCCCCCC--CceeeCCchHHHHHHHcC
Confidence            89999998876652      123 456666655544321 1111122110    011100  010  013455665  56


Q ss_pred             CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------ccccccccEEEeCCCcccc--C
Q 043610          207 PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTRFGVIYAGAQKNVG--P  269 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~~d~~~~s~~K~~g--p  269 (430)
                      +++.+|++-.+.+..|.+.|      +|.++ +++|+++++|++|+ +|-.       ..++ .-|+++.  .|.+|  .
T Consensus       178 ~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~--gK~lg~G~  254 (395)
T PRK03715        178 DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGI-EPDIMTL--GKGIGGGV  254 (395)
T ss_pred             CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCC-CCceeee--hhhhhCCc
Confidence            67888999888888888865      34444 58999999999986 3211       1222 2366544  59994  2


Q ss_pred             CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          270 SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       270 ~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      + +|.+.+++++...    .+..        .+.++ +.+.....++.++|+.+.+    +.+.++.+++.+++++.|++
T Consensus       255 p-~~av~~~~~i~~~----~~~~--------~~~T~-~g~pl~~aaala~L~~l~~----~~l~~~~~~~g~~l~~~L~~  316 (395)
T PRK03715        255 P-LAALLAKAEVAVF----EAGD--------QGGTY-NGNPLMTAVGVAVISQLLA----PGFLEGVRARGEYLKEKLLE  316 (395)
T ss_pred             c-eEEEEEccccccc----cCCC--------cCCCC-CCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHH
Confidence            2 5777778776421    1100        11232 3456677888888998763    35677778888888888775


Q ss_pred             c---CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc---CCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          350 S---NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE---KMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       350 ~---~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~---Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      .   .++.    +...++ .++.+.+.+ ....++.+.+.+.   |+.+...  ....+|+++...+|++||++++++|+
T Consensus       317 l~~~~~i~----~vrG~G-lm~~i~l~~-~~~~~~~~~~~~~~~~Gi~~~~~--~~~~lR~~p~l~~t~~ei~~~~~~l~  388 (395)
T PRK03715        317 LSEERGLE----GERGEG-LLRALLLGK-DIGPQIVEKARDMQPDGLLLNAP--RPNLLRFMPALNVTTEEIDQMIAMLR  388 (395)
T ss_pred             HhhcCCcC----eEEcce-eEEEEEecC-chHHHHHHHHHhccCCCEEEeec--CCCEEEEeCCcccCHHHHHHHHHHHH
Confidence            2   1221    111123 345566653 1112455555555   9887431  12479999999999999999999999


Q ss_pred             HHHHhh
Q 043610          424 DFQAKH  429 (430)
Q Consensus       424 ~~~~~~  429 (430)
                      +.++.-
T Consensus       389 ~~l~~~  394 (395)
T PRK03715        389 SVLDKL  394 (395)
T ss_pred             HHHHhh
Confidence            988753

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.38  E-value=2.9e-10  Score=116.11  Aligned_cols=330  Identities=11%  Similarity=0.020  Sum_probs=178.3

Q ss_pred             CCCCCceeecCCCC--CC---cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           66 GQEDRVFNFAAGPA--NL---PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        66 ~~~~~~~l~~~gp~--~~---~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      ...+..+.+..|-.  ++   ++.+.+++.+.+.+..   ...+ .....+.    ..++.+.|.+..+.+....++|+ 
T Consensus        38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~---~~~~-~~~~~~~----~~~la~~l~~~~~~~~~~~~~f~-  108 (425)
T PRK08088         38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS---HTCF-QVLAYEP----YLELCEKMNQKVPGDFAKKTLLV-  108 (425)
T ss_pred             CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC---Cccc-cccCCHH----HHHHHHHHHHhCCCCCCCEEEEe-
Confidence            34444555655432  22   8899999998886421   1000 0000122    22455556666654321267776 


Q ss_pred             CcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHh-CCce--------------EEecCCCCcCCCCCC--cc
Q 043610          141 GGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQ--------------VIWSGKAEKYTKIPN--FD  201 (430)
Q Consensus       141 ~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~-g~~~--------------~v~~~~~~~~g~~~d--~~  201 (430)
                      .||++|++.++.-.  ...+.+|+.+..++.|....  +... +...              .++...+ ..+...+  ++
T Consensus       109 ~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~  185 (425)
T PRK08088        109 TTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHY--TLALTGKVNPYSAGMGLMPGHVYRALYPCP-LHGVSEDDAIA  185 (425)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHH--HHHhhCCCCccccCCCCCCCCcEEcCCCcc-ccCccHHHHHH
Confidence            56788887664432  23345677777667664211  1111 1110              0001000 0010000  22


Q ss_pred             ccc--cC-----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc----cccccccEEEeC
Q 043610          202 ALE--QN-----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP----VDVTRFGVIYAG  262 (430)
Q Consensus       202 ~l~--i~-----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~----idl~~~d~~~~s  262 (430)
                      +++  +.     ++..+|++--+....|.+.+      +|.++ +++|++++.|++++ +|...    ++......-+.+
T Consensus       186 ~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s  265 (425)
T PRK08088        186 SIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTT  265 (425)
T ss_pred             HHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEE
Confidence            344  32     34556666544444566554      35554 58999999999976 33221    111122233578


Q ss_pred             CCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          263 AQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       263 ~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      ++|.+++ |  +|+++.++++++.+....           ...+ .+.+...+.++...|+.+...    ...++.+++.
T Consensus       266 ~sK~l~~-G~rig~v~~~~~~~~~~~~~~-----------~~~t-~~~~~~~~~a~~~~l~~~~~~----~~~~~~~~~~  328 (425)
T PRK08088        266 FAKSIAG-GFPLAGVTGRAEVMDAIAPGG-----------LGGT-YAGNPIACAAALAVLKVFEQE----NLLQKANALG  328 (425)
T ss_pred             EeccccC-CCcceeeEecHHHHhhcCCCC-----------CCCC-CCcCHHHHHHHHHHHHHHHhc----CHHHHHHHHH
Confidence            8999973 4  799999999887653210           1112 235666788888888876533    3334444444


Q ss_pred             HHHHHHHHcc---CCceecCCCCCCCccceEEEEcCC--------CchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCC
Q 043610          341 ELLYNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEK--------SDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNA  409 (430)
Q Consensus       341 ~~l~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~--------~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~  409 (430)
                      +++++.|.+.   .+. +..+..  .. ..+.+.+.+        .....++.+.+.++||.+.++....+.||+++...
T Consensus       329 ~~~~~~l~~l~~~~~~-~~~v~g--~G-~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~  404 (425)
T PRK08088        329 EKLKDGLLAIAEKHPE-IGDVRG--LG-AMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLT  404 (425)
T ss_pred             HHHHHHHHHHHHhCCC-eEEEec--cc-eEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCC
Confidence            4444444432   221 100111  12 335555521        11123688888889998765433346799999988


Q ss_pred             CCHHHHHHHHHHHHHHHHh
Q 043610          410 MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       410 ~t~edv~~ll~~L~~~~~~  428 (430)
                      ++++||++.++.|++.++.
T Consensus       405 ~t~~ei~~~i~~l~~~l~~  423 (425)
T PRK08088        405 IEDAQIRQGLEIIAQCFDE  423 (425)
T ss_pred             cCHHHHHHHHHHHHHHHHh
Confidence            8999999999999998865

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.37  E-value=2e-10  Score=116.40  Aligned_cols=329  Identities=11%  Similarity=0.027  Sum_probs=182.2

Q ss_pred             CCCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           66 GQEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        66 ~~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      .+.++.+.+..|-     +--+|.|.+++.+.+.+....+.     ....    +...++.+.|.++.... + .++|. 
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~----~~~~~la~~L~~~~~~~-~-~v~f~-  104 (408)
T PRK04612         37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN-----VFYS----APPLKLAEELVTASRFA-E-KVFLC-  104 (408)
T ss_pred             CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc-----ccCC----HHHHHHHHHHHhhCCCC-C-EEEEc-
Confidence            3444455555543     33488999999998865221110     0111    22234555555554322 2 67765 


Q ss_pred             CcHHHHHHHHHhhcC------C--CC-CcEEEEeCChhHHHHHHHHHHhCCceE----EecCCCCcCCCCCCccccc--c
Q 043610          141 GGATTQFAAVPLNLC------T--PN-DPVDYIVTGSWGDKAFKEAQKFCNPQV----IWSGKAEKYTKIPNFDALE--Q  205 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~------~--~g-d~vl~~~~g~~~~~~~~~a~~~g~~~~----v~~~~~~~~g~~~d~~~l~--i  205 (430)
                      +||++|++.++.-..      +  ++ .+|+.+..++.|.-..... ..+....    -+.......-..+|.+.++  +
T Consensus       105 ~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~  183 (408)
T PRK04612        105 NSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVT-ATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAM  183 (408)
T ss_pred             CchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHH-hcCCcccccCCCCCCCCceEcCCCCHHHHHHhh
Confidence            789999997764321      1  12 3567676666553211111 1121100    0000000000113455565  4


Q ss_pred             CCCccEEEEeecCCCccccCC-------CCccc-cCCCcEEEEeccCc-CCCCc--ccccccc--EEEeCCCccccCCc-
Q 043610          206 NPDAKYLHICANETIHGVEFK-------EYPSA-KNSTGILVADMSSN-FCSKP--VDVTRFG--VIYAGAQKNVGPSG-  271 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~~~p-------ei~~~-~~~g~~lvvD~a~s-~G~~~--idl~~~d--~~~~s~~K~~gp~G-  271 (430)
                      .++....++..+...+|-.++       +|.++ +++|+++++|++|. +|.-.  +-....+  ..+.++.|.+|+ | 
T Consensus       184 ~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~-G~  262 (408)
T PRK04612        184 AGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGG-GF  262 (408)
T ss_pred             CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcC-CC
Confidence            444444555555555554444       24444 58999999999986 43311  1111112  345677999962 4 


Q ss_pred             -cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          272 -VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       272 -~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                       +|+++.++++.+.+....           ...+ ++.+...+.++.++|+.+.+    +++.++.+++.+++++.|++.
T Consensus       263 piga~~~~~~~~~~~~~~~-----------~~~t-~~~~p~~~aaa~a~L~~~~~----~~l~~~~~~~g~~l~~~l~~l  326 (408)
T PRK04612        263 PIGAMLAGPKVAETMQFGA-----------HGTT-FGGNPLAAAVARVALRKLAS----PQIAANVARQSAALRAGLEAL  326 (408)
T ss_pred             ceEEEEECHHHHhhhcCCC-----------cCCC-CCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHH
Confidence             788888888766543210           1112 24567788888889988764    356777778888888887752


Q ss_pred             C-CceecCCCCCCCccceEEEEcCCC--chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          351 N-GFYKCPVEKSVRSFMNVPFTLEKS--DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       351 ~-G~~~~~~~~~~rs~~iv~f~~~~~--~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      . .+.++. +-..+. ..+.+.+.+.  ....++.+.+.++|+++.+..  ...+|+.+....+++||+++++.|++.+.
T Consensus       327 ~~~~~~i~-~vrg~G-l~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g--~~~lRl~Ppl~it~eeid~~l~~l~~~l~  402 (408)
T PRK04612        327 NAEFGVFA-QVRGRG-LMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAG--PDVLRFVPALNLTDAELADGLARLRLALA  402 (408)
T ss_pred             HhhCCCee-eeeccc-eEEEEEecCchhhHHHHHHHHHHHCCeEEeeCC--CCEEEEcCCccCCHHHHHHHHHHHHHHHH
Confidence            1 121111 111122 2344444321  112368888999999986521  24799999999999999999999998876


Q ss_pred             h
Q 043610          428 K  428 (430)
Q Consensus       428 ~  428 (430)
                      +
T Consensus       403 ~  403 (408)
T PRK04612        403 D  403 (408)
T ss_pred             H
Confidence            5

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.37  E-value=1.6e-10  Score=118.56  Aligned_cols=330  Identities=11%  Similarity=0.075  Sum_probs=185.4

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-     +--+|.|.+++.+++.+....  +   ....    .+...++.+.|.+++....+ .++| ++|
T Consensus        81 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~--~---~~~~----~~~~~~lae~L~~~~p~~~~-~v~f-~~S  149 (459)
T PRK11522         81 GQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLH--S---QELL----DPLRAMLAKTLAALTPGKLK-YSFF-CNS  149 (459)
T ss_pred             CCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCccc--c---cccC----CHHHHHHHHHHHHhCCCCCC-EEEE-eCC
Confidence            33444454442     334789999999988642110  0   0011    12334555666666543333 5666 478


Q ss_pred             HHHHHHHHHhhc--CC--CCC-cEEEEeCChhHHHHHHHHHHhCCc-eE---EecCCCCcCCCCCCccccc--cC-----
Q 043610          143 ATTQFAAVPLNL--CT--PND-PVDYIVTGSWGDKAFKEAQKFCNP-QV---IWSGKAEKYTKIPNFDALE--QN-----  206 (430)
Q Consensus       143 aT~a~~~~~~sl--~~--~gd-~vl~~~~g~~~~~~~~~a~~~g~~-~~---v~~~~~~~~g~~~d~~~l~--i~-----  206 (430)
                      |+||++.++.-.  ..  +|. +|+.+..++.|.-..-.. ..+.. ..   .+....-..-...|.++++  +.     
T Consensus       150 GsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  228 (459)
T PRK11522        150 GTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALS-ATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKT  228 (459)
T ss_pred             chHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhh-hcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhcc
Confidence            999999876642  11  233 466666666553211111 11211 00   0000000000012344444  22     


Q ss_pred             -CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------ccccccccEEEeCCCccccC-
Q 043610          207 -PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTRFGVIYAGAQKNVGP-  269 (430)
Q Consensus       207 -~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~~d~~~~s~~K~~gp-  269 (430)
                       +++.+|++--+....|++.|      ++.++ +++|+++++|++|. +|-.       ..++ .-|++  ++.|.+|- 
T Consensus       229 ~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDiv--t~gK~lggG  305 (459)
T PRK11522        229 GDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV-QPDIL--CLAKALGGG  305 (459)
T ss_pred             CCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCC-CCCEE--EechhhhCC
Confidence             34566777666777788877      24444 58999999999984 4321       1122 12655  66899941 


Q ss_pred             -CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          270 -SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       270 -~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                       .-+|.+++++++.+.... .++.        .+.++ .-|.....++.++|+.+.+    +.+.++.+++.+++++.|+
T Consensus       306 ~~Pigav~~~~~i~~~~~~-~~~~--------~~~T~-~gnp~~~Aaala~L~~i~~----~~l~~~~~~~g~~l~~~L~  371 (459)
T PRK11522        306 VMPIGATIATEEVFSVLFD-NPFL--------HTTTF-GGNPLACAAALATINVLLE----QNLPAQAEQKGDYLLDGFR  371 (459)
T ss_pred             CccceeEEEcHHHHHHhcc-CCcc--------cCCCC-CCCHHHHHHHHHHHHHHhc----chHHHHHHHHHHHHHHHHH
Confidence             126888888887664321 1111        01122 2266677888889998764    2467888888888888887


Q ss_pred             ccC-Cce-ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          349 GSN-GFY-KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       349 ~~~-G~~-~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +.. .+. ++. +-..+. .++.+.+.+.+....+.+.|.++||++.........+|+.+...++++||++++++|.+.+
T Consensus       372 ~l~~~~~~~i~-~VrG~G-l~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l  449 (459)
T PRK11522        372 QLAREYPDLVQ-EARGKG-MLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKAL  449 (459)
T ss_pred             HHHHhCCCcee-eEEece-eEEEEEecCchHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence            631 121 110 111123 3455666542222368888889999975421123479999999999999999999999887


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       450 ~~  451 (459)
T PRK11522        450 AA  451 (459)
T ss_pred             HH
Confidence            53

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.36  E-value=1.7e-10  Score=121.94  Aligned_cols=291  Identities=11%  Similarity=-0.012  Sum_probs=182.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+.++++..|++||++.   ..|+++|+|.++.+++++++++||.|++-.+.|-|.  +......| .++++.... ++
T Consensus       195 G~i~eAe~~aA~~fgAd~---tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv--~~aLilsga~PVYl~P~~-n~  268 (713)
T PRK15399        195 GPHLEAEEYIARTFGAEQ---SYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSL--AHLLMMSDVVPIWLKPTR-NA  268 (713)
T ss_pred             hHHHHHHHHHHHHhCCCc---EEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHH--HHHHHHcCCeeEEecccc-cc
Confidence            566799999999999974   566779999999999999999999999888887663  22223346 777776533 24


Q ss_pred             CCC--CCCc-----cccc--c--CCCc---cEEEEeecCCCccccCC--CCccccCCCcEE-EEeccCc--CCCCcc--c
Q 043610          194 YTK--IPNF-----DALE--Q--NPDA---KYLHICANETIHGVEFK--EYPSAKNSTGIL-VADMSSN--FCSKPV--D  252 (430)
Q Consensus       194 ~g~--~~d~-----~~l~--i--~~~~---~lv~i~~~~t~tG~~~p--ei~~~~~~g~~l-vvD~a~s--~G~~~i--d  252 (430)
                      +|-  .++.     +.++  +  .|+.   +.+++++ .|..|++.+  +|.+..  |+.+ ++|+++.  +...|.  +
T Consensus       269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~-pTYdGi~yd~~~I~~~~--g~~~ilvDEAhgah~~F~p~~~~  345 (713)
T PRK15399        269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITN-STYDGLLYNTDWIKQTL--DVPSIHFDSAWVPYTHFHPIYQG  345 (713)
T ss_pred             cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEEC-CCCCceeeCHHHHHHHh--CCCEEEEeccchhhhhcCcccCC
Confidence            551  2344     3443  2  3444   5777766 588999999  676643  4444 7999875  222221  1


Q ss_pred             ---ccc---ccE---EEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH
Q 043610          253 ---VTR---FGV---IYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY  322 (430)
Q Consensus       253 ---l~~---~d~---~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~  322 (430)
                         +..   .|.   ++-|.||.+ |.+..+++.++.. ++.-  ..-.++..       ....+|+++.++++..+..+
T Consensus       346 ~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-vd~~--~~n~a~~m-------~~STSPsY~LmASLD~a~~~  415 (713)
T PRK15399        346 KSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-YDEE--TFNEAFMM-------HTSTSPSYPIVASVETAAAM  415 (713)
T ss_pred             cChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-CCHH--HHHHHHHH-------HcCCCcHHHHHHHHHHHHHH
Confidence               111   254   489999999 5888899887543 1110  00000000       01136777777778888777


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHccCC------ceecCCC-----------C--C------------CCccceEEEE
Q 043610          323 LLELGGLNEVEKMNRKKAELLYNVIDGSNG------FYKCPVE-----------K--S------------VRSFMNVPFT  371 (430)
Q Consensus       323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G------~~~~~~~-----------~--~------------~rs~~iv~f~  371 (430)
                      +....| +.+.++..+++..+|+.|.+..+      |+++..+           +  .            ..-++-+++.
T Consensus       416 m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~  494 (713)
T PRK15399        416 LRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTIL  494 (713)
T ss_pred             HHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEE
Confidence            753234 56777777777888888876444      3443210           0  0            1134445555


Q ss_pred             cCC---------CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          372 LEK---------SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       372 ~~~---------~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .++         .+... .+.+.|.++||+.-...  ...+=+-+....+++++++|+++|.++.+
T Consensus       495 t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d--~~~vL~l~s~g~t~~~~~~L~~aL~~f~~  558 (713)
T PRK15399        495 TPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG--PYNLLFLFSIGIDKTKAMGLLRGLTEFKR  558 (713)
T ss_pred             ecCcccccccccCCCCHHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            542         13455 57778988999965421  12344444445699999999999998743

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.36  E-value=2.8e-10  Score=116.49  Aligned_cols=332  Identities=10%  Similarity=0.033  Sum_probs=184.3

Q ss_pred             CCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-.     --+|.|.+++.+.+.+....+.+.  ..      .+...++.+.|++++.-..+ .++|. +
T Consensus        41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~--~~------~~~~~~la~~L~~~~~~~~~-~v~f~-~  110 (433)
T PRK08117         41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGV--IY------YESILKLAEELAEITPGGLD-CFFFS-N  110 (433)
T ss_pred             CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccc--cC------CHHHHHHHHHHHHhCCCCCC-EEEEe-C
Confidence            3455555655532     257899999999886532111000  11      13345677778888732222 56664 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHh-------C------CceEEecCCCC--cCCCC------C
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKF-------C------NPQVIWSGKAE--KYTKI------P  198 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~-------g------~~~~v~~~~~~--~~g~~------~  198 (430)
                      ||++|++.++.-.  .....+++.+..++.|.-..-.....       +      .+..++.....  +.+..      .
T Consensus       111 SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (433)
T PRK08117        111 SGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLE  190 (433)
T ss_pred             cHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHH
Confidence            8999999877642  22235666666555442111010000       0      11122211000  00000      0


Q ss_pred             Cccccc--cC-----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC--CccccccccE--E
Q 043610          199 NFDALE--QN-----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS--KPVDVTRFGV--I  259 (430)
Q Consensus       199 d~~~l~--i~-----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~--~~idl~~~d~--~  259 (430)
                      ++++++  +.     .++.+|++--+....|.+.|      ++.++ +++|+++++|++|. +|-  ..+-.+.+|+  -
T Consensus       191 ~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pD  270 (433)
T PRK08117        191 CLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPD  270 (433)
T ss_pred             HHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCC
Confidence            223333  21     34556666556666788876      24444 58999999999987 221  1111122221  1


Q ss_pred             EeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610          260 YAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR  337 (430)
Q Consensus       260 ~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~  337 (430)
                      +.++.|.+| .|  +|.++.++++.+.....           ..+.+ ++.|...+.++.++|+.+.+    +.+.++.+
T Consensus       271 i~t~sK~lg-~G~pigav~~~~~i~~~~~~~-----------~~~~T-~~~np~~~aaa~a~L~~l~~----~~l~~~~~  333 (433)
T PRK08117        271 IMTIAKGIA-SGLPLSAVVASKELMEQWPLG-----------SHGTT-FGGNPVACAAALATLEVIKE----EKLLDNAN  333 (433)
T ss_pred             Eeehhhhcc-CCCcceeEEEcHHHHhhccCC-----------CCCCC-CCcCHHHHHHHHHHHHHHHh----ccHHHHHH
Confidence            368899997 35  78888898887654210           01112 24567778888899987753    24666777


Q ss_pred             HHHHHHHHHHHccC-CceecCCCCCCCcc-ceEEEEcCCC------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCC
Q 043610          338 KKAELLYNVIDGSN-GFYKCPVEKSVRSF-MNVPFTLEKS------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNA  409 (430)
Q Consensus       338 ~l~~~l~~~l~~~~-G~~~~~~~~~~rs~-~iv~f~~~~~------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~  409 (430)
                      ++.+++++.|.+.. .+.+. .+  .|.. ..+.+.+.+.      .....+.+.+.++||+..+.....+.+|+++...
T Consensus       334 ~~g~~l~~~L~~l~~~~~~~-~~--vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~  410 (433)
T PRK08117        334 EMGAYALERLEVLKEKHPVI-GD--VRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLT  410 (433)
T ss_pred             HHHHHHHHHHHHHHhcCCce-ee--eecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCcc
Confidence            77788888777521 11111 11  1222 2233444211      1112577788889998754212235799999888


Q ss_pred             CCHHHHHHHHHHHHHHHHh
Q 043610          410 MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       410 ~t~edv~~ll~~L~~~~~~  428 (430)
                      ++++||+++++.|.+.+++
T Consensus       411 ~t~~~i~~~~~~l~~~l~~  429 (433)
T PRK08117        411 VTKEEIDEGLDILDEALTE  429 (433)
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            9999999999999988764

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.34  E-value=1.7e-09  Score=110.76  Aligned_cols=327  Identities=10%  Similarity=-0.016  Sum_probs=185.8

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.++.+.+..|-     +--+|.|.+++.+.+.+....+.    .. ..   .+...++.+.|.+++....+ .++| ++
T Consensus        39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~----~~-~~---~~~~~~la~~L~~~~p~~~~-~v~f-~~  108 (443)
T PRK08360         39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTP----IY-GF---PVEPLLLAEKLIEIAPGDNP-KVSF-GL  108 (443)
T ss_pred             CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccc----cc-cC---cHHHHHHHHHHHHhCCCCCC-EEEE-cC
Confidence            344455565552     33488999999999875211110    00 00   12233555666677654433 6666 57


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCCC--cCCCC------C
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKAE--KYTKI------P  198 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~~--~~g~~------~  198 (430)
                      ||+||++.++.-.  .....+|+....++.|....... ..+             .+..++.....  .++..      .
T Consensus       109 sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (443)
T PRK08360        109 SGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMS-LTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKME  187 (443)
T ss_pred             CHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHH-hcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHH
Confidence            8999999876643  23345666666666553211111 011             11122211000  00000      0


Q ss_pred             Cccccc--c-----CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc-------cccccc
Q 043610          199 NFDALE--Q-----NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP-------VDVTRF  256 (430)
Q Consensus       199 d~~~l~--i-----~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~-------idl~~~  256 (430)
                      +++.++  +     .+++++|++.-..+++|+..+      ++.++ +++|+++++|++|. +|...       .++. -
T Consensus       188 ~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~-p  266 (443)
T PRK08360        188 CVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVE-P  266 (443)
T ss_pred             HHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCC-C
Confidence            112222  2     256888888767789999887      23443 58999999999976 44211       1111 2


Q ss_pred             cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043610          257 GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEK  334 (430)
Q Consensus       257 d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~  334 (430)
                      |++  +..|.+| .|  +|+++.++++.+.+... .          ...+ ...+...+.++.++|+.+.+.    .+.+
T Consensus       267 Dii--tlsK~l~-~G~pigav~~~~~i~~~~~~~-~----------~~~T-~~~~p~~~aaa~a~l~~l~~~----~l~~  327 (443)
T PRK08360        267 DII--TLGKPLG-GGLPISATIGRAEIMDSLPPL-A----------HAFT-LSGNPVASAAALAVIEEIEEK----NLLK  327 (443)
T ss_pred             CEE--Eeccccc-CCceeEEEEEcHHHHhhhcCC-C----------CCCC-CCcCHHHHHHHHHHHHHHHHc----CHHH
Confidence            555  4599997 35  78999998887765321 0          0112 234555688888899987642    3566


Q ss_pred             HHHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcCCC------c--hhHHHHHHHHHcCCeecCCCCCCCeeEEe
Q 043610          335 MNRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEKS------D--LEAEFVKEAAKEKMVQLKGHRSVGGMRAS  405 (430)
Q Consensus       335 ~~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~------~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis  405 (430)
                      +.+++.+++++.|++.. .+.++. +-..+. .++.+.+.+.      .  ....+..+|.++|+++...  ....+|++
T Consensus       328 ~~~~~g~~l~~~L~~l~~~~~~v~-~vrg~G-l~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~~~~lr~~  403 (443)
T PRK08360        328 RAEKLGNYTKKRLEEMKKKHELIG-DVRGIG-LMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF--SGNVLRIQ  403 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCee-eeeccc-eEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec--CCCEEEEe
Confidence            77777777777776521 122211 111122 2334444211      0  1125777888999987532  12469999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHHh
Q 043610          406 IYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       406 ~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +...+|++||++++++|++.+++
T Consensus       404 P~l~~t~~~id~~~~~l~~~l~~  426 (443)
T PRK08360        404 PPLTIEKEVLDEGLDILEEAIED  426 (443)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998764

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.34  E-value=8.8e-10  Score=112.37  Aligned_cols=331  Identities=11%  Similarity=0.027  Sum_probs=179.5

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.++.+.+..|-     +--+|.|.+++.+.+.+....+.    .....    +...++.+.|.+++.....+.++|. +
T Consensus        31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~----~~~~~----~~~~~la~~l~~~~p~~~~~~v~f~-~  101 (420)
T TIGR00700        31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCF----MVTPY----EGYVALAEKLNRIAPGSGPKKSVFF-N  101 (420)
T ss_pred             CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccc----cccCC----hHHHHHHHHHHHhCCCCCCCEEEEe-C
Confidence            344444555543     33478999999998865211110    00111    1223455556666642211267775 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHH-------H--hC----CceEEecCCC--CcCCC-CC----C
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQ-------K--FC----NPQVIWSGKA--EKYTK-IP----N  199 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~-------~--~g----~~~~v~~~~~--~~~g~-~~----d  199 (430)
                      ||++|++.++.-.  .....+|+.+..++.|.-......       +  ++    .+..++....  ...+. ..    +
T Consensus       102 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (420)
T TIGR00700       102 SGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGE  181 (420)
T ss_pred             CcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHH
Confidence            8999999775532  233456776766665532111110       0  01    1111221100  00000 00    0


Q ss_pred             ccccc--c-----CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccc----cccE
Q 043610          200 FDALE--Q-----NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVT----RFGV  258 (430)
Q Consensus       200 ~~~l~--i-----~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~----~~d~  258 (430)
                      ++.++  +     .+++.+|++--+...+|+..+      +|.++ +++|+++|+|+++. +|-.  .+-+.    ..|+
T Consensus       182 ~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi  261 (420)
T TIGR00700       182 LAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDL  261 (420)
T ss_pred             HHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCE
Confidence            22333  2     245667777656677788777      34454 58999999999976 4321  11111    1254


Q ss_pred             EEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043610          259 IYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN  336 (430)
Q Consensus       259 ~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~  336 (430)
                      +  ++.|.++ .|  +|++++++++++.+.+.   .        ...+ .+.|...+.++.++|+.+.+ +   .+.++.
T Consensus       262 ~--~lsK~l~-~G~pig~v~~~~~i~~~~~~~---~--------~~~T-~~~~pl~~aaa~a~l~~l~~-~---~~~~~~  322 (420)
T TIGR00700       262 I--TTAKSLA-DGLPLSGVTGRAEIMDAPAPG---G--------LGGT-YAGNPLACAAALAVLAIIES-E---GLIERA  322 (420)
T ss_pred             E--Eeecccc-CCcceEEEEecHHHHhhcCCC---C--------cCCC-CCcCHHHHHHHHHHHHHHHh-c---cHHHHH
Confidence            4  4899997 34  79999999987764321   0        1122 24566778888888987764 2   344555


Q ss_pred             HHHHHHHHHHHHccCC-ceecCCCCCCCccceEEEEcCCC-------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecC
Q 043610          337 RKKAELLYNVIDGSNG-FYKCPVEKSVRSFMNVPFTLEKS-------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYN  408 (430)
Q Consensus       337 ~~l~~~l~~~l~~~~G-~~~~~~~~~~rs~~iv~f~~~~~-------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~  408 (430)
                      +++.+++++.|.+... +..+. +-..+. ..+.+.+.+.       ....++.+.+.++||.+.++....+.||+++..
T Consensus       323 ~~~g~~l~~~L~~l~~~~~~~~-~vrg~G-~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l  400 (420)
T TIGR00700       323 RQIGRLVTDRLTTLKAVDPRIG-DVRGLG-AMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPL  400 (420)
T ss_pred             HHHHHHHHHHHHHHHhhCCCEE-Eeeccc-eEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCC
Confidence            5555556666654211 11110 100122 2344444211       112246667778999998764334589999877


Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q 043610          409 AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       409 ~~t~edv~~ll~~L~~~~~  427 (430)
                      ..+++++++.++.|.++++
T Consensus       401 ~~~~~~l~~~~~~l~~~l~  419 (420)
T TIGR00700       401 TIGDELLSEGLDILCAILA  419 (420)
T ss_pred             CcCHHHHHHHHHHHHHHhh
Confidence            7789999999999999874

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.33  E-value=5.2e-10  Score=114.19  Aligned_cols=317  Identities=11%  Similarity=0.060  Sum_probs=174.5

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CC
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CT  156 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~  156 (430)
                      +--+|.|.+++.+++.+....  +   ....    .+...++.+.|.+++..+.+ .++| ++||+||++.++.-.  ..
T Consensus        90 Gh~hp~v~~Av~~ql~~l~~~--~---~~~~----~~~~~~lAe~L~~~~p~~~~-~v~f-~~SGsEA~e~AlklAr~~t  158 (442)
T TIGR03372        90 GHRNPNVIAAVENQLAKQPLH--S---QELL----DPLRALLAKTLAALTPGKLK-YSFF-CNSGTESVEAALKLAKAYQ  158 (442)
T ss_pred             CCCCHHHHHHHHHHHHhCCCc--c---cccC----CHHHHHHHHHHHHhCCCCcC-EEEE-eCCchHHHHHHHHHHHHHH
Confidence            345789999999988652211  0   0001    12234555666666543322 5665 588999999876532  11


Q ss_pred             --CC-CcEEEEeCChhHHHHHHHHHHhCCce----EEecCCCCcCCCCCCccccc--c------CCCccEEEEeecCCCc
Q 043610          157 --PN-DPVDYIVTGSWGDKAFKEAQKFCNPQ----VIWSGKAEKYTKIPNFDALE--Q------NPDAKYLHICANETIH  221 (430)
Q Consensus       157 --~g-d~vl~~~~g~~~~~~~~~a~~~g~~~----~v~~~~~~~~g~~~d~~~l~--i------~~~~~lv~i~~~~t~t  221 (430)
                        .| .+|+.+..++.|.-..... ..+...    ..+....-..-..+|.++++  +      ..++.+|++--+....
T Consensus       159 ~~~gr~~ii~~~~~yHG~t~~~ls-~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~g  237 (442)
T TIGR03372       159 SPRGKFTFIAASGAFHGKSLGALS-ATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEG  237 (442)
T ss_pred             hhcCCcEEEEECCCccCCCHHHhh-ccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCC
Confidence              23 4566666665553211111 111100    00100000000012333332  2      1346667776666667


Q ss_pred             cccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc----ccEEEeCCCcccc---CCccEEEEEcHHHHhc
Q 043610          222 GVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR----FGVIYAGAQKNVG---PSGVTIVIVRKDLLGN  284 (430)
Q Consensus       222 G~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~----~d~~~~s~~K~~g---p~G~g~l~v~~~~~~~  284 (430)
                      |+..|      ++.++ +++|+++++|++|. +|-.  .+-.+.    -|+++  ..|.+|   .+ +|.++.++++.+.
T Consensus       238 G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~P-igavv~~~~i~~~  314 (442)
T TIGR03372       238 GVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC--LAKALGGGVMP-IGATIATEAVFSV  314 (442)
T ss_pred             CcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeee--ehhhhcCCccc-ceEEEecHHHHHh
Confidence            88777      34554 58999999999984 5421  111111    26554  789995   22 5777788888765


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-Cce-ecCCCCCC
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFY-KCPVEKSV  362 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~-~~~~~~~~  362 (430)
                      ... .++.        .+.++ +-|..+.+++.++|+.++++    .+.++.+++.+++++.|++.. .+. .+. +-.-
T Consensus       315 ~~~-~~~~--------~~~T~-~gnp~~~Aaa~a~L~~i~~~----~l~~~~~~~G~~l~~~L~~l~~~~~~~i~-~vRG  379 (442)
T TIGR03372       315 LFD-NPFL--------HTTTF-GGNPLACAAALATINELLEK----NLPAQAAIKGDFLLDGFQQLAAEYPDLII-EARG  379 (442)
T ss_pred             hhc-cCcc--------ccCCC-CCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHhCCCceE-EEec
Confidence            421 1111        11222 23566778888899988643    355566667777777776521 111 110 1111


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ++ ..+.+.+.+......+.+.|.++||++.........+||.+...+|++|+++++++|++.+
T Consensus       380 ~G-l~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~  442 (442)
T TIGR03372       380 KG-LLMAIEFRDNEIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL  442 (442)
T ss_pred             ce-EEEEEEeCChHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            23 2344565432222368888999999985421112479999999999999999999998753

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PLN00144 acetylornithine transaminase

Probab=99.33  E-value=5.3e-10  Score=112.49  Aligned_cols=310  Identities=12%  Similarity=0.010  Sum_probs=175.2

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--C-C-
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--C-T-  156 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~-~-  156 (430)
                      -+|.|.+++.+++.+....+     .....    ....++.+.|.++.+  .+ .|+|. +||+||++.++.-.  . + 
T Consensus        32 ~~p~v~~ai~~q~~~~~~~~-----~~~~~----~~~~~la~~l~~~~~--~~-~v~f~-~sGseA~e~AlklAr~~~~~   98 (382)
T PLN00144         32 GDPDWVKAVAEQAGTLAHVS-----NVYHT----IPQVELAKRLVASSF--AD-RVFFC-NSGTEANEAAIKFARKYQRV   98 (382)
T ss_pred             CCHHHHHHHHHHHHhcCCcc-----ccccC----HHHHHHHHHHHhcCC--CC-eEEEe-CCcHHHHHHHHHHHHHHHhc
Confidence            47899999999886421110     00111    122344555555543  33 67765 78999999776532  1 1 


Q ss_pred             -----C------CCcEEEEeCChhHHHHHHHHHHhCCce----EEecCCCCcCCCCCCccccc--c-CCCccEEEEeecC
Q 043610          157 -----P------NDPVDYIVTGSWGDKAFKEAQKFCNPQ----VIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANE  218 (430)
Q Consensus       157 -----~------gd~vl~~~~g~~~~~~~~~a~~~g~~~----~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~  218 (430)
                           +      ..+++.+..++.|.-..... ..+...    ..+...+..+-...|+++++  + ..++++|++.-+.
T Consensus        99 ~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q  177 (382)
T PLN00144         99 RAPDKKDPAASSATEFVSFSNSFHGRTLGALA-LTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQ  177 (382)
T ss_pred             cCCCCccccccccceEEEECCCcccccHHHHh-cCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEcccc
Confidence                 1      24577777666554211111 111110    00000000000012456665  3 3467777776667


Q ss_pred             CCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c--cccccc--cEEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          219 TIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P--VDVTRF--GVIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       219 t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~--idl~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      ++.|+..+      +|.++ +++|+++|+|+++. +|-.  +  .+...+  |  +.++.|.+++ |  +|++++++++.
T Consensus       178 ~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD--i~t~sK~l~~-G~pig~v~~~~~~~  254 (382)
T PLN00144        178 GEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD--IMTLAKPLAG-GLPIGAVLVTEKVA  254 (382)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC--EEEecccccC-CcceEEEEEcHHHH
Confidence            77555554      24444 58999999999976 4322  1  112222  4  6677999953 3  79999998887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-CceecCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYKCPVEKS  361 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~~~~~~~  361 (430)
                      +.+.+..           ...++ +.|...+.++.++|+++.+ +   ...++.+++.+++++.+.+.. ....+. +-.
T Consensus       255 ~~~~~~~-----------~~~T~-~~~pl~~aaa~a~l~~i~~-~---~~~~~~~~~g~~l~~~l~~~~~~~~~~~-~vr  317 (382)
T PLN00144        255 SAINPGD-----------HGSTF-AGGPLVCNAALAVLDKISK-P---GFLASVAKKGEYLRELLRRKLGGNPHVK-EVR  317 (382)
T ss_pred             hccCCCC-----------CCCCC-CCCHHHHHHHHHHHHHHhh-c---hHHHHHHHHHHHHHHHHHHHHhhCCCce-eee
Confidence            7643210           11222 4455667888888998863 3   344555555555555554421 111110 111


Q ss_pred             CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ... ..+.+.+..  ...++...+.++||.+.++.. ...||+++....+++|++.+++.|++.+.+
T Consensus       318 g~G-~~~~l~l~~--~~~~~~~~~~~~Gv~i~~~~~-~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~  380 (382)
T PLN00144        318 GVG-LLVGIQLDV--PAGPLVDACRDSGLLVLTAGK-GDVVRLVPPLVISEAELEQAVEILADCLPA  380 (382)
T ss_pred             cCc-eEEEEEecC--ccHHHHHHHHHCCeEEeecCC-CCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence            122 334455531  123688899999999876522 357999999878899999999999998865

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.32  E-value=1.1e-09  Score=101.94  Aligned_cols=329  Identities=11%  Similarity=0.108  Sum_probs=178.8

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCC--cHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHR--GKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATTQ  146 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~a  146 (430)
                      .++++.|-...-|++.+.+++...+.-.+|.-.-.+..+  .+....+++.+.+.+.+-+|-  .++ +|.++ +|+-.+
T Consensus        32 ~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~-NIalT-nGSQs~  109 (417)
T COG3977          32 AIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQ-NIALT-NGSQSA  109 (417)
T ss_pred             ceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccc-eeeec-CCccch
Confidence            566666554444567777766544433333211112222  233445677788888888775  343 56664 555555


Q ss_pred             HHHHHhhcC---CCCC--cEEE-EeCChhHHHHHHHHHHhCCceEEecCC------CCcCCCCCCccccccCCCccEEEE
Q 043610          147 FAAVPLNLC---TPND--PVDY-IVTGSWGDKAFKEAQKFCNPQVIWSGK------AEKYTKIPNFDALEQNPDAKYLHI  214 (430)
Q Consensus       147 ~~~~~~sl~---~~gd--~vl~-~~~g~~~~~~~~~a~~~g~~~~v~~~~------~~~~g~~~d~~~l~i~~~~~lv~i  214 (430)
                      +.-++.-+.   ..|+  +|+. +.+.+.|+.  +..  ...-..|...+      ...+...+|.+++++.+++-+|++
T Consensus       110 fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~--d~~--l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~e~~g~ic~  185 (417)
T COG3977         110 FFYLFNLFAGRRSDGTEKKILLPLAPEYIGYA--DAG--LEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIGESTGAICV  185 (417)
T ss_pred             HHHHHHHhcCccCCCcceeEeeccChhhcccc--ccc--cCccceeeccCCcccccccceeeccCHHHcccccccceEEe
Confidence            554333232   2344  3333 233444431  000  00111111110      001223577778888889999999


Q ss_pred             eecCCCccccCC--CCccc----cCCCcEEEEeccCcCCCCccccccc----c---EEEeCCCccccCCc--cEEEEEcH
Q 043610          215 CANETIHGVEFK--EYPSA----KNSTGILVADMSSNFCSKPVDVTRF----G---VIYAGAQKNVGPSG--VTIVIVRK  279 (430)
Q Consensus       215 ~~~~t~tG~~~p--ei~~~----~~~g~~lvvD~a~s~G~~~idl~~~----d---~~~~s~~K~~gp~G--~g~l~v~~  279 (430)
                      +-+.||||.++.  |+.++    +.+|+.+++|-+++...-.+.+++.    .   +++.|.+| +|.+|  +|+++.++
T Consensus       186 SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK-~GLPG~R~GIiIane  264 (417)
T COG3977         186 SRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSK-LGLPGSRCGIIIANE  264 (417)
T ss_pred             cCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhh-cCCCCcceeEEEccH
Confidence            999999999987  66553    5899999999998866554444433    2   78899999 67667  99999999


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH-----HHHHhcCHHHHHHHHHHHHHHHHHHHHccCC-c
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE-----YLLELGGLNEVEKMNRKKAELLYNVIDGSNG-F  353 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~-----~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-~  353 (430)
                      ++++.+..... ..+.           .|.-.+.+.+..+++     .+.+    +-++--++...+...+.|++.++ .
T Consensus       265 ~viqaitnmn~-iisL-----------ap~~~G~Aia~~mie~gdl~rlse----qVIrPFY~~~~q~~~~~l~~~lp~~  328 (417)
T COG3977         265 KVIQAITNMNG-IISL-----------APGRMGPAIAAEMIESGDLLRLSE----QVIRPFYRNRVQTTIAILRRYLPEY  328 (417)
T ss_pred             HHHHHHHhccc-eeee-----------cCCCccHHHHHHHhhcchHHHHHH----HhhhHHHHHHHHHHHHHHHHhcCcc
Confidence            99876432110 0000           011111122222222     1111    12223333344444444443322 1


Q ss_pred             eecCCCCCCCccceEE-EEcCCCchhH-HHHHHHHHcCCeecCCCCC-----------CCeeEEeecCCCCHHHHHHHHH
Q 043610          354 YKCPVEKSVRSFMNVP-FTLEKSDLEA-EFVKEAAKEKMVQLKGHRS-----------VGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       354 ~~~~~~~~~rs~~iv~-f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~-----------~g~iRis~~~~~t~edv~~ll~  420 (430)
                      ......++  . .++. +.+.+-.... ++.++|++.|+.+++|+..           ..++|+++..  .++.+++-+.
T Consensus       329 ~~~iHkpE--G-AIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~--~~~~ie~Gva  403 (417)
T COG3977         329 RCLIHKPE--G-AIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP--EPEKIEKGVA  403 (417)
T ss_pred             ceeeecCC--c-ceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecCC--CHHHHHHHHH
Confidence            11111221  2 2443 3444422333 7999999999999988631           2379999887  6677777776


Q ss_pred             HHHHHHH
Q 043610          421 FMKDFQA  427 (430)
Q Consensus       421 ~L~~~~~  427 (430)
                      .|.+.++
T Consensus       404 ~lae~ve  410 (417)
T COG3977         404 ILAEEVE  410 (417)
T ss_pred             HHHHHHH
Confidence            6665543

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.31  E-value=1.3e-09  Score=111.81  Aligned_cols=329  Identities=12%  Similarity=0.073  Sum_probs=182.7

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.++.+.+..|-     +--.|.|.+++.+++.+.....   + .....    +...++.+.|.+++.......++|+ +
T Consensus        54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~---~-~~~~~----~~~~~la~~l~~~~p~~~~~~v~f~-~  124 (443)
T PRK06058         54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTC---F-MVTPY----EGYVAVAEQLNRLTPGDHEKRSALF-N  124 (443)
T ss_pred             CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCcc---c-cccCC----HHHHHHHHHHHHhCCCCCCCEEEEe-C
Confidence            344444555543     2347899999999886421000   0 00011    2333555666676643321267775 6


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHH-------H--hC----CceEEecCCCCcCCCC----CC---
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQ-------K--FC----NPQVIWSGKAEKYTKI----PN---  199 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~-------~--~g----~~~~v~~~~~~~~g~~----~d---  199 (430)
                      ||++|++.++.-.  ....++|+.+..++.|.-......       +  ++    .+..++...  .+...    .+   
T Consensus       125 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  202 (443)
T PRK06058        125 SGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSY--PYRDPKGLATDGEE  202 (443)
T ss_pred             CcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCc--ccccccccccchHH
Confidence            7899999876621  233467777776665532111110       0  01    111111111  01100    00   


Q ss_pred             -----ccccc--cC-CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c-----cccccc
Q 043610          200 -----FDALE--QN-PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P-----VDVTRF  256 (430)
Q Consensus       200 -----~~~l~--i~-~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~-----idl~~~  256 (430)
                           .++++  +. +++.+|++--+....|++.|      +|.++ +++|+++|+|+++. +|-.  .     .++. -
T Consensus       203 ~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~-P  281 (443)
T PRK06058        203 AAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIV-P  281 (443)
T ss_pred             HHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCC-C
Confidence                 11122  22 45666666545555677765      34554 58999999999975 4421  1     1221 2


Q ss_pred             cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043610          257 GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEK  334 (430)
Q Consensus       257 d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~  334 (430)
                      |+++.  .|.+| .|  +|.++.++++.+.+.+.   .        .+.++ ..|..++.++.++|+.+.+    +.+.+
T Consensus       282 Div~~--gK~l~-~G~Pi~av~~~~~i~~~~~~~---~--------~~~T~-~gnpl~~aaa~a~L~~~~~----~~l~~  342 (443)
T PRK06058        282 DLITT--AKGIA-GGLPLSAVTGRAEIMDAPHPG---G--------LGGTY-GGNPVACAAALAAIETIEE----DDLVA  342 (443)
T ss_pred             CEEEE--ccccc-CCCccEEEEEcHHHHhhccCC---C--------CCCCC-CCCHHHHHHHHHHHHHHHH----cCHHH
Confidence            66665  49996 24  78888899887654321   0        11232 4566778888899987764    25667


Q ss_pred             HHHHHHHHHHHHHHccCC-ceecCCCCCCCccceEEEEcCCC-------chhHHHHHHHHHcCCeecCCCCCCCeeEEee
Q 043610          335 MNRKKAELLYNVIDGSNG-FYKCPVEKSVRSFMNVPFTLEKS-------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASI  406 (430)
Q Consensus       335 ~~~~l~~~l~~~l~~~~G-~~~~~~~~~~rs~~iv~f~~~~~-------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~  406 (430)
                      +.+++.++++++|++... ..++. +-.-+.. .+.+.+.+.       .....+.+.+.++|+++.++....+.||+.+
T Consensus       343 ~~~~~g~~l~~~L~~l~~~~~~i~-~vrg~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~P  420 (443)
T PRK06058        343 RARQIEALMTDRLRALAAEDDRIG-DVRGRGA-MIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLP  420 (443)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCcEE-eeeccce-EEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEEC
Confidence            777777888888876311 12110 1111222 233443211       1112466777789999876422234799999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHh
Q 043610          407 YNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       407 ~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ....|++||++++++|++++++
T Consensus       421 pl~~t~~~i~~~~~~l~~~l~~  442 (443)
T PRK06058        421 PLVIGDELLREGLDVLEAALAD  442 (443)
T ss_pred             CCccCHHHHHHHHHHHHHHHHh
Confidence            8889999999999999998764

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.31  E-value=4.6e-10  Score=112.73  Aligned_cols=287  Identities=10%  Similarity=0.071  Sum_probs=172.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCC------
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGK------  190 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~------  190 (430)
                      .+.++.+++++|.+   .++++ +|||.|++.+....++|||.|  +.+.+|..... ..+..| ...-+...+      
T Consensus        74 ~~lE~~va~~~G~~---~av~v-~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~a-hIe~~Gav~vDi~~dea~~~~~  146 (450)
T TIGR02618        74 YHLERTVRELYGFK---YVVPT-HQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRY-HQEKNGATFVDIIIDEAHDAQL  146 (450)
T ss_pred             HHHHHHHHHHHCCC---eEEEc-CCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHH-HHHhCCeEEEeeeccccccccc
Confidence            37788999999987   46665 789999988765567999976  44555543211 123445 333332210      


Q ss_pred             CCcCCCCCCccccc--cCC----CccEEEEeecCCC-ccccCC-----CCccc-cCCCcEEEEeccCcCCC---------
Q 043610          191 AEKYTKIPNFDALE--QNP----DAKYLHICANETI-HGVEFK-----EYPSA-KNSTGILVADMSSNFCS---------  248 (430)
Q Consensus       191 ~~~~g~~~d~~~l~--i~~----~~~lv~i~~~~t~-tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~---------  248 (430)
                      +.++...+|++.++  +++    ++++|.+....|. .|...+     +|.++ +++|+.++.|+++.+|.         
T Consensus       147 ~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~  226 (450)
T TIGR02618       147 NIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQ  226 (450)
T ss_pred             CCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccc
Confidence            01222357888887  554    3456666665554 478866     45554 68999999999998853         


Q ss_pred             --Cccccc--------cccEEEeCCCcccc-CCccEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHH
Q 043610          249 --KPVDVT--------RFGVIYAGAQKNVG-PSGVTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMC  316 (430)
Q Consensus       249 --~~idl~--------~~d~~~~s~~K~~g-p~G~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~  316 (430)
                        ...++.        -.|.+++|++|-.+ |.| |++.. ++++.++++.....+-       ....+|......+.++
T Consensus       227 g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~e-------G~~tyGgla~r~~~al  298 (450)
T TIGR02618       227 GYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVFE-------GMPSYGGLAGRDMEAM  298 (450)
T ss_pred             cccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhcC-------CccccCchhhhhHHHH
Confidence              122231        13789999999996 888 77774 5677777654322211       1123455555566666


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc-------CCCchhH-HHHHHHH-H
Q 043610          317 GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL-------EKSDLEA-EFVKEAA-K  387 (430)
Q Consensus       317 ~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~-------~~~~~~~-~~~~~L~-~  387 (430)
                      ..+|+...+.    ....+.....++|.+.|.+ .|+.++.  + ...+ .+.+..       |..+... .+...|. +
T Consensus       299 a~gL~e~~~~----~y~~~r~~~a~~La~~L~~-~Gvpv~~--p-~ggh-~V~vda~~~lph~~~~~~p~~al~~~ly~~  369 (450)
T TIGR02618       299 AIGIREAVDY----EYIEHRVKQVRYLGDKLKA-AGVPIVE--P-VGGH-AVFLDARRFLPHIPQDQFPAQSLAASIYVE  369 (450)
T ss_pred             HHHHHHhhhH----HHHHHHHHHHHHHHHHHHH-CCCcccC--C-CCcc-eEEEEhHHhCCCCChhhChHHHHHHHHHHH
Confidence            6677654321    2333333456788889987 5887642  2 1222 233332       2222333 5777774 4


Q ss_pred             cCCeecC-CC----C--------C--CCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          388 EKMVQLK-GH----R--------S--VGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       388 ~Gi~~~~-g~----~--------~--~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                      .||..+. |.    +        .  ..-+|+.+-- --|.+.+|-..++|..+.++
T Consensus       370 ~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~  426 (450)
T TIGR02618       370 TGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH  426 (450)
T ss_pred             hCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence            5776321 11    1        1  2359999766 34688899999999887653

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.31  E-value=3e-10  Score=108.87  Aligned_cols=284  Identities=13%  Similarity=0.096  Sum_probs=176.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhH--H-HHHHHHHHhC-CceEEecCCCCc
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWG--D-KAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~--~-~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      +..++.++.+=|--.   -+.+ .||..|+..++.+++++||+|+... .-||  + .+....+++| +++.+..     
T Consensus        65 ~vlE~RiAaLEGG~a---a~a~-aSG~AA~~~ai~~la~aGD~iVss~-~LYGGT~~lf~~tl~~~Gi~v~fvd~-----  134 (426)
T COG2873          65 DVLEERIAALEGGVA---ALAV-ASGQAAITYAILNLAGAGDNIVSSS-KLYGGTYNLFSHTLKRLGIEVRFVDP-----  134 (426)
T ss_pred             HHHHHHHHHhhcchh---hhhh-ccchHHHHHHHHHhccCCCeeEeec-cccCchHHHHHHHHHhcCcEEEEeCC-----
Confidence            355677777777543   2343 6789999999999999999998543 2232  1 1223357789 7776653     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC--CCccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC--SKPVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G--~~~idl~~~d~~~~s~~K~  266 (430)
                          .|+++++  ++++||+|++=...||.+.+.|  .|+++ +++|+.++||-+-+-+  ..|++-. .|+++-|..||
T Consensus       135 ----~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hG-ADIVvHS~TK~  209 (426)
T COG2873         135 ----DDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHG-ADIVVHSATKY  209 (426)
T ss_pred             ----CCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecchhhcC-CCEEEEeeccc
Confidence                3467776  8999999999999999999999  68887 7999999999875544  3455442 38999999999


Q ss_pred             ccCCc--cEEEEEcHHHHhcc-CCC-------CCccccccchh-----------h-c--CCCCCCccHHHHHHHHHHHHH
Q 043610          267 VGPSG--VTIVIVRKDLLGNA-QDK-------TPLMLDYKIHD-----------E-N--NSLYNTPPCYCIYMCGLVFEY  322 (430)
Q Consensus       267 ~gp~G--~g~l~v~~~~~~~~-~~~-------~p~~~~~~~~~-----------~-~--~~~~~T~~~~~~~a~~~al~~  322 (430)
                      +|-.|  +|.+++.-.-.+.. ...       .|.|.+..-..           + .  .....+.+.+..+.+...|| 
T Consensus       210 igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlE-  288 (426)
T COG2873         210 IGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLE-  288 (426)
T ss_pred             ccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchh-
Confidence            96445  88888865444432 111       23333211100           0 0  01112444444343333333 


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--C---CCCC---------CCccceEEEEcCCCchhH--HHHHHHH
Q 043610          323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--P---VEKS---------VRSFMNVPFTLEKSDLEA--EFVKEAA  386 (430)
Q Consensus       323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~---~~~~---------~rs~~iv~f~~~~~~~~~--~~~~~L~  386 (430)
                           -+.-+.+|+.+.+..+.++|.+.+....+  +   ..+.         .....+++|.+.+. .+.  +|+..|+
T Consensus       289 -----TL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg-~ea~~~fi~~l~  362 (426)
T COG2873         289 -----TLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG-YEAGKKFIDALK  362 (426)
T ss_pred             -----hhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecCh-HHHHHHHHHHHH
Confidence                 23445677788888889999874422211  1   0111         12346899999863 222  5766654


Q ss_pred             H----cCCe------ecCC---C------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          387 K----EKMV------QLKG---H------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       387 ~----~Gi~------~~~g---~------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      -    .+|-      +-|-   |            ...+.||+|++.    ||++.+++-|+..+.
T Consensus       363 L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI----Ed~~DiiaDl~qAl~  424 (426)
T COG2873         363 LFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI----EDIDDIIADLEQALE  424 (426)
T ss_pred             HHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHh
Confidence            2    2332      2110   1            124579999985    888888887777654

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.30  E-value=1.7e-09  Score=110.14  Aligned_cols=329  Identities=10%  Similarity=0.049  Sum_probs=184.2

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+.+.+......    .....    +...++.+.|.+++.......++|. +
T Consensus        38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~~~~~----~~~~~la~~l~~~~p~~~~~~~~f~-~  108 (421)
T PRK09792         38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY----QIVPY----ESYVTLAEKINALAPVSGQAKTAFF-T  108 (421)
T ss_pred             CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc----CccCC----HHHHHHHHHHHHhCCCCCCceEEEe-C
Confidence            344444555543     23478999999998865211100    00011    1223444556666543221267776 6


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhCC--------------ceEEecCCCCcCCCC--CCcccc
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFCN--------------PQVIWSGKAEKYTKI--PNFDAL  203 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g~--------------~~~v~~~~~~~~g~~--~d~~~l  203 (430)
                      ||++|++.++.-.  .....+|+.+..++.|.-..... ..+.              +..++...+ ..+..  -+++++
T Consensus       109 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~~~~v~~p~~-~~~~~~~~~~~~l  186 (421)
T PRK09792        109 TGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMA-LTGKVAPYKIGFGPFPGSVYHVPYPSD-LHGISTQDSLDAI  186 (421)
T ss_pred             ChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHh-hcCCCcccccCCCCCCCCcEEcCCCcc-cccccHHHHHHHH
Confidence            8999999776543  22234677677666553211111 0110              111221110 00100  012344


Q ss_pred             c--cC-----CCccEEEEeecCCCccccC-C-----CCccc-cCCCcEEEEeccCc-CCCC--cccccc----ccEEEeC
Q 043610          204 E--QN-----PDAKYLHICANETIHGVEF-K-----EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR----FGVIYAG  262 (430)
Q Consensus       204 ~--i~-----~~~~lv~i~~~~t~tG~~~-p-----ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~----~d~~~~s  262 (430)
                      +  +.     +++.+|++.-+.+++|+.. |     +|.++ +++|+++|+|+++. +|-.  ++-.+.    -|  +.+
T Consensus       187 ~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pD--i~t  264 (421)
T PRK09792        187 ERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPD--LMT  264 (421)
T ss_pred             HHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCc--EEE
Confidence            4  22     4577888877788899876 4     34454 58999999999976 4321  111222    25  366


Q ss_pred             CCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          263 AQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       263 ~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      ..|.+|+ |  +|+++.++++.+.....           ....++ +.|...+.++.++++++.+.    ...++.+++.
T Consensus       265 ~gK~l~~-G~pigav~~~~~i~~~~~~~-----------~~~~T~-~gnpl~~aaa~a~l~~l~~~----~~~~~~~~~g  327 (421)
T PRK09792        265 MAKSLAG-GMPLSGVVGNANIMDAPAPG-----------GLGGTY-AGNPLAVAAAHAVLNIIDKE----SLCERANQLG  327 (421)
T ss_pred             eehhhcC-CCceEEEEEcHHHHhccCCC-----------CcCCCC-CCCHHHHHHHHHHHHHHHhh----hHHHHHHHHH
Confidence            7999952 2  78888999887654220           011232 34556777788888887642    4555666777


Q ss_pred             HHHHHHHHccC-CceecCCCCCCCccceEEEEcCCC-------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCH
Q 043610          341 ELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEKS-------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL  412 (430)
Q Consensus       341 ~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~-------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~  412 (430)
                      +++++.|.+.. .+..+ .+..-+ ...+.+.+++.       .....+...+.++|+++.........||+.+....++
T Consensus       328 ~~l~~~l~~l~~~~p~v-~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~  405 (421)
T PRK09792        328 QRLKNTLIDAKESVPAI-AAVRGL-GSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPD  405 (421)
T ss_pred             HHHHHHHHHHHHhCCCc-ceeccc-ceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCH
Confidence            77777666421 11111 122112 23455666532       1122577788889999853211235799998888999


Q ss_pred             HHHHHHHHHHHHHHH
Q 043610          413 AGVEKLVAFMKDFQA  427 (430)
Q Consensus       413 edv~~ll~~L~~~~~  427 (430)
                      +|+++++++|.+.++
T Consensus       406 ~ei~~~~~~l~~~l~  420 (421)
T PRK09792        406 AQFDAAMKILQDALS  420 (421)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998874

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.28  E-value=3.1e-09  Score=108.27  Aligned_cols=316  Identities=12%  Similarity=0.081  Sum_probs=177.3

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCC
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTP  157 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~  157 (430)
                      --+|.|.+++.+.+.+....+.    .....+.    ..++.+.|.+++..+....++|. +|||+|++.++.-.  ...
T Consensus        56 h~~p~v~~ai~~ql~~~~~~~~----~~~~~~~----~~~la~~l~~~~p~~~~~~~~f~-~sGseA~e~AlklAr~~tg  126 (421)
T PRK06777         56 HRHPKVVAAVRQQLDQFTHTAY----QIVPYAS----YVTLAERINALAPIDGPAKTAFF-TTGAEAVENAVKIARAYTG  126 (421)
T ss_pred             CCCHHHHHHHHHHHhhcccccc----cccCChH----HHHHHHHHHHhCCCCCCceEEEe-CCcHHHHHHHHHHHHHhhC
Confidence            3477899999998875211110    0001112    23445566676653211267776 68999999776542  233


Q ss_pred             CCcEEEEeCChhHHHHHHHHHHhCC--------------ceEEecCCCCcCCC--CCCccccc--cC-----CCccEEEE
Q 043610          158 NDPVDYIVTGSWGDKAFKEAQKFCN--------------PQVIWSGKAEKYTK--IPNFDALE--QN-----PDAKYLHI  214 (430)
Q Consensus       158 gd~vl~~~~g~~~~~~~~~a~~~g~--------------~~~v~~~~~~~~g~--~~d~~~l~--i~-----~~~~lv~i  214 (430)
                      ..+|+.+..++.|.-..-.. ..+.              +..++... ...+.  ..++++++  +.     +++.+|++
T Consensus       127 r~~ii~~~~~yHG~t~~~~s-~t~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~  204 (421)
T PRK06777        127 RPGVIAFGGAFHGRTLLTMA-LTGKVAPYKVGFGPFPGSIFHALYPN-ELHGVSVEEALSSVERLFKADIAPDQVAAILL  204 (421)
T ss_pred             CCeEEEEcCCcCCccHHHHh-hcCCCcccccCCCCCCCCcEEcCCCc-cccCcCHHHHHHHHHHHHHhccCCCceEEEEE
Confidence            44677677666553211111 0111              01111100 00000  01123344  22     34666777


Q ss_pred             eecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc----ccEEEeCCCccccCCc--cEEEEEc
Q 043610          215 CANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR----FGVIYAGAQKNVGPSG--VTIVIVR  278 (430)
Q Consensus       215 ~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~----~d~~~~s~~K~~gp~G--~g~l~v~  278 (430)
                      --+....|+..+      +|.++ +++|+++++|+++. +|..  .+-...    -|++  +..|.+| .|  +|+++.+
T Consensus       205 Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~-~G~pigav~~~  281 (421)
T PRK06777        205 EPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLG-GGMPISAVVGR  281 (421)
T ss_pred             CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEE--eeehhhc-CCCceEEEEEc
Confidence            666666786544      34444 58999999999976 3321  111121    2544  5899997 35  7889999


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-CceecC
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYKCP  357 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~~~  357 (430)
                      +++++.+.+..           ...++ +.|...+.++.++|+.+.+    +.+.++.+++.+++++.|++.. ....+.
T Consensus       282 ~~i~~~~~~~~-----------~~~T~-~~~p~~~aaa~a~L~~~~~----~~l~~~~~~~g~~l~~~L~~l~~~~~~i~  345 (421)
T PRK06777        282 AEVMDAPAPGG-----------LGGTY-AGNPLAVAAALAVLDVIAE----EKLCQRALILGAHLVEVLEKAKASCPAIV  345 (421)
T ss_pred             HHHHhccCCCC-----------CCCCC-CcCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            98877643210           11222 3577778888899987753    4677788888888888887631 011110


Q ss_pred             CCCCCCccceEEEEcCCC--c-----hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          358 VEKSVRSFMNVPFTLEKS--D-----LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       358 ~~~~~rs~~iv~f~~~~~--~-----~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       +-..+.. .+.+.+.+.  .     ....+...+.++||++.++....+.+||++-...++++++++++.|++++.
T Consensus       346 -~vrg~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~  420 (421)
T PRK06777        346 -DIRARGS-MVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA  420 (421)
T ss_pred             -EecCceE-EEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence             1111222 233333211  1     112355566789999877543335899999877899999999999998874

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.27  E-value=3.8e-09  Score=106.27  Aligned_cols=329  Identities=13%  Similarity=0.074  Sum_probs=191.4

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..+..+.|..|-     +--+|.|++++++++++.+.....        .-..+...+..+.|.+++-.+....++| ++
T Consensus        54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~--------~~~~e~~v~~ae~L~~~~p~~~~~~~~f-~~  124 (447)
T COG0160          54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTR--------DLYYEPYVELAEKLTALAPGSGLKKVFF-GN  124 (447)
T ss_pred             CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCC--------cccchhHHHHHHHHHHhCCcccCCeEEe-cC
Confidence            344455566643     335899999999998865422211        0111344455566666665532214554 58


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHH-------HH--hC----CceEEecCCCCcCCCCC--------
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEA-------QK--FC----NPQVIWSGKAEKYTKIP--------  198 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a-------~~--~g----~~~~v~~~~~~~~g~~~--------  198 (430)
                      ||++|+++++.-.  ...+..|+.+...+.|.-...+.       .+  ++    .++.++...  .+-...        
T Consensus       125 sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~--~yr~p~~~~~~~~~  202 (447)
T COG0160         125 SGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPN--PYRCPFGIGGEECG  202 (447)
T ss_pred             CcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCc--cccCcccCchhhhh
Confidence            8999999876543  23456677666555442111110       11  11    234444322  121110        


Q ss_pred             --Cccccc--c-----C-CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCC---Cccccccc--
Q 043610          199 --NFDALE--Q-----N-PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCS---KPVDVTRF--  256 (430)
Q Consensus       199 --d~~~l~--i-----~-~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~---~~idl~~~--  256 (430)
                        ..+.++  +     . .++.++++=-+....|.+.|      ++.++ +++|+++|+|++|+-..   .-+-++.+  
T Consensus       203 ~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv  282 (447)
T COG0160         203 DDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV  282 (447)
T ss_pred             HHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC
Confidence              011122  1     1 24667777777888899988      24444 69999999999987322   12333333  


Q ss_pred             --cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610          257 --GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV  332 (430)
Q Consensus       257 --d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v  332 (430)
                        |+++  +.|.+|- |  +|.++.++++.+ ..   |.-+        +.+ +.-|..+.+++.+.|+.+++    +.+
T Consensus       283 ~PDivt--~aK~ig~-G~Pl~avv~r~ei~~-~~---~g~~--------~~T-f~GNpva~Aaa~AvL~vie~----e~L  342 (447)
T COG0160         283 EPDIVT--LAKSLGG-GLPLSAVVGRAEIMD-WP---PGGH--------GGT-FGGNPVACAAALAVLDVIEE----ENL  342 (447)
T ss_pred             CCCEEE--ecccccC-CCceeEEeccHHhcc-cC---Cccc--------CCC-CCcCHHHHHHHHHHHHHHHH----ccH
Confidence              5554  5688842 3  688888988865 21   1111        112 23356677788888987764    367


Q ss_pred             HHHHHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcC-C-----C--chhHHHHHHHHHcCCeecCCCCCCCeeE
Q 043610          333 EKMNRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLE-K-----S--DLEAEFVKEAAKEKMVQLKGHRSVGGMR  403 (430)
Q Consensus       333 ~~~~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~-~-----~--~~~~~~~~~L~~~Gi~~~~g~~~~g~iR  403 (430)
                      .+|..++.++++++|.+.. .+..+. +-.-+..+ +-+.+- +     +  ....+++.++.++|+++.......+.||
T Consensus       343 ~~~a~~~G~~l~~~L~~l~~~~~~Ig-dVRG~Glm-~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviR  420 (447)
T COG0160         343 LERAAELGEYLRDRLEELQEKHPLIG-DVRGLGLM-IGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLR  420 (447)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcee-cccccceE-EEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEE
Confidence            8888888888888887632 122221 22112222 223322 1     1  1122577888899998765333345799


Q ss_pred             EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          404 ASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       404 is~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      |.+-...+++++|.+++.|.+.++.
T Consensus       421 i~PPL~is~e~~d~~l~il~~al~~  445 (447)
T COG0160         421 ILPPLTISDEELDEGLDILEEALKE  445 (447)
T ss_pred             EeCCcccCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999998865

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.27  E-value=8.4e-10  Score=119.79  Aligned_cols=289  Identities=10%  Similarity=0.069  Sum_probs=184.7

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CC--CCCcEEEEeCChhHHH--HHHHHHHhC-Cc
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CT--PNDPVDYIVTGSWGDK--AFKEAQKFC-NP  183 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~--~gd~vl~~~~g~~~~~--~~~~a~~~g-~~  183 (430)
                      ++...+.+-+....++++.|.+.. +.-+. .++|.+-++++++. ..  ++++|++.+..+....  +...++..| ++
T Consensus       104 sQG~Le~l~e~Qt~i~eLtGm~~a-NaSl~-d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v  181 (939)
T TIGR00461       104 SQGRLEALLNFQTVVSDLTGLPVA-NASLL-DEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEV  181 (939)
T ss_pred             hhHHHHHHHHHHHHHHHHHCCChh-hhhcc-chhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEE
Confidence            456678888999999999999864 33443 67888888877774 22  3467776665554432  222344556 55


Q ss_pred             eEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--c
Q 043610          184 QVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--G  257 (430)
Q Consensus       184 ~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d  257 (430)
                      ++++            +++|+ .- ++..|++ ...|..|.+.|  +|.++ +++|+++++++-........+..++  |
T Consensus       182 ~~~~------------~~~l~~~~-~~~~v~~-q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaD  247 (939)
T TIGR00461       182 IVVD------------CSDIKKAV-DVFGCLL-QYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGAD  247 (939)
T ss_pred             EEEc------------HHHHhhcC-CEEEEEE-ECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCc
Confidence            5442            22343 11 4654555 45667899998  78775 7899999997765555554455555  7


Q ss_pred             EEEeCCCccccCC-----ccEEEEEcHHHHhccCCCCCc-ccc------ccchhhc-----CCCCCCccHH---HHHHHH
Q 043610          258 VIYAGAQKNVGPS-----GVTIVIVRKDLLGNAQDKTPL-MLD------YKIHDEN-----NSLYNTPPCY---CIYMCG  317 (430)
Q Consensus       258 ~~~~s~~K~~gp~-----G~g~l~v~~~~~~~~~~~~p~-~~~------~~~~~~~-----~~~~~T~~~~---~~~a~~  317 (430)
                      +++++.|+|.-|.     +.||+.+++++...+....-. ..|      |....+.     +..-.|.|.-   .+.++.
T Consensus       248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~  327 (939)
T TIGR00461       248 IVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANV  327 (939)
T ss_pred             EEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHH
Confidence            8888888765333     389999999887664321100 001      1000000     1112454432   222222


Q ss_pred             HH--HHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCC
Q 043610          318 LV--FEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG  395 (430)
Q Consensus       318 ~a--l~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g  395 (430)
                      ++  +.++-. .|+.++.+++..++.++.++|.+ .|+++.. + .. .. .+.+.++. ....++.++|.++||.... 
T Consensus       328 a~~Y~~~~G~-~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~-~-~f-F~-~~~v~~~~-~~~~~i~~~~~~~gi~l~~-  399 (939)
T TIGR00461       328 ASSYCVYHGP-KGLKNIARRIHSLTSILANGLEN-DPHELIN-K-TW-FD-TLTVKVGN-GISSELLKAAEEFNINLRA-  399 (939)
T ss_pred             HHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHh-CCCcccC-C-Cc-cc-eEEEEeCC-CCHHHHHHHHHHCCCeeee-
Confidence            33  454443 48999999999999999999997 8998763 2 22 22 34555542 1133799999999998543 


Q ss_pred             CCCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          396 HRSVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       396 ~~~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                       ...+.+++|+.-++|++||++++++|.
T Consensus       400 -~~~~~i~~s~~E~~t~~di~~l~~~~~  426 (939)
T TIGR00461       400 -VDTTTVGIALDETTTKADVENLLKVFD  426 (939)
T ss_pred             -cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence             223579999999999999999999984

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.26  E-value=9.2e-10  Score=109.26  Aligned_cols=277  Identities=16%  Similarity=0.110  Sum_probs=169.8

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHH-HHHHhC-CceEEecCCCCcC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFK-EAQKFC-NPQVIWSGKAEKY  194 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~-~a~~~g-~~~~v~~~~~~~~  194 (430)
                      +..++.++.+-|...   .+.+ +||..|+..++.+++++||+|++....|-+. ++.+ ..+++| ++.++...     
T Consensus        66 ~~lE~~~a~LEg~~~---~~af-sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~-----  136 (396)
T COG0626          66 DALEEALAELEGGED---AFAF-SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG-----  136 (396)
T ss_pred             HHHHHHHHHhhCCCc---EEEe-cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC-----
Confidence            355677777777763   4444 6899999999999999999999876543332 3332 345667 66555431     


Q ss_pred             CCCCCccccc-cC-CCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcC--CCCccccccccEEEeCCCccc
Q 043610          195 TKIPNFDALE-QN-PDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNF--CSKPVDVTRFGVIYAGAQKNV  267 (430)
Q Consensus       195 g~~~d~~~l~-i~-~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~--G~~~idl~~~d~~~~s~~K~~  267 (430)
                         .+.+.++ +. ++|++|++=.+.||+-.+.|  .|+++ +++|++++||.+-+-  ...|+++. .|+++-|..|.+
T Consensus       137 ---~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~G-aDIVvhSaTKyl  212 (396)
T COG0626         137 ---DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELG-ADIVVHSATKYL  212 (396)
T ss_pred             ---ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccChhhcC-CCEEEEeccccc
Confidence               1112233 44 69999999999999999999  78887 788899999998653  34566553 599999999999


Q ss_pred             cCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          268 GPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       268 gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      |-.+   .|++..+.+.+....     ++.     .+..+...+.....+.+...|+      -+.-+.+++.+.+..+.
T Consensus       213 ~GHsDvl~G~v~~~~~~~~~~~-----~~~-----~~~~~G~~l~p~dA~l~lRGlk------TL~~Rm~~~~~nA~~IA  276 (396)
T COG0626         213 GGHSDVLGGVVLTPNEELYELL-----FFA-----QRANTGAVLSPFDAWLLLRGLR------TLALRMERHNENALKIA  276 (396)
T ss_pred             cCCcceeeeEEecChHHHHHHH-----HHH-----HHhhcCCCCCHHHHHHHHhccc------hHHHHHHHHHHHHHHHH
Confidence            5333   354444554433210     000     1111223445555554444443      24556677777788888


Q ss_pred             HHHHccCCceec--CC---CCC-------C-CccceEEEEcCCCchhH-HHHHHHHHc-------CCe---ecC---CC-
Q 043610          345 NVIDGSNGFYKC--PV---EKS-------V-RSFMNVPFTLEKSDLEA-EFVKEAAKE-------KMV---QLK---GH-  396 (430)
Q Consensus       345 ~~l~~~~G~~~~--~~---~~~-------~-rs~~iv~f~~~~~~~~~-~~~~~L~~~-------Gi~---~~~---g~-  396 (430)
                      ++|.+.+.++-+  |.   .|.       . ...++++|.+.+. ... +|++.|+--       |+-   ..+   .| 
T Consensus       277 ~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~  355 (396)
T COG0626         277 EFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHA  355 (396)
T ss_pred             HHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHHHHHHHhCCccEEeccCCCcccccccccccCcc
Confidence            888874444321  21   110       1 1457899999862 112 466655422       111   111   11 


Q ss_pred             ------C-----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          397 ------R-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       397 ------~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                            +     ..+-||+|++.    ||++.|++-|+..+++
T Consensus       356 ~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~  394 (396)
T COG0626         356 SIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAK  394 (396)
T ss_pred             cCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHh
Confidence                  0     13469999996    7777777777766543

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.26  E-value=7.7e-10  Score=116.07  Aligned_cols=277  Identities=10%  Similarity=-0.001  Sum_probs=163.1

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhh---cC-
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN---LC-  155 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~s---l~-  155 (430)
                      +.++.++..+...+.|.++  .    ....++....+.+++-+.+++++|.++. .-+|+ +|||+|+...+..   .. 
T Consensus        94 ~~~paila~~~a~~~N~n~--~----~~e~SP~~t~lE~~vi~~la~l~G~~~~-~G~~T-sGGT~ANl~aL~~AR~~k~  165 (608)
T TIGR03811        94 TLMPAILAYNYAMLWNGNN--V----AYESSPATSQMEEEVGKEFATLMGYKNG-WGHIV-ADGSLANLEGLWYARNIKS  165 (608)
T ss_pred             CCHHHHHHHHHHHHhCCCC--C----ccccCchHHHHHHHHHHHHHHHhCCCCC-CeEEe-CChHHHHHHHHHHHHHhhh
Confidence            4566666665554433221  1    1223566777888999999999999764 34554 7889988743322   10 


Q ss_pred             -----CC-------------------------------------------CC------cEEEEeCChhHHHHHHHHHHhC
Q 043610          156 -----TP-------------------------------------------ND------PVDYIVTGSWGDKAFKEAQKFC  181 (430)
Q Consensus       156 -----~~-------------------------------------------gd------~vl~~~~g~~~~~~~~~a~~~g  181 (430)
                           +.                                           |.      .+++....||+  |.+.+.-.|
T Consensus       166 ~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS--~~KAa~ilG  243 (608)
T TIGR03811       166 LPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYS--WLKAADIIG  243 (608)
T ss_pred             ccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHH--HHHHHHHcC
Confidence                 00                                           00      12222333555  344444444


Q ss_pred             ----CceEEecCCCCcCCCCCCccccc--cC----CC--ccEEEEeecCCCccccCC--CCccc----cCCCc--EEEEe
Q 043610          182 ----NPQVIWSGKAEKYTKIPNFDALE--QN----PD--AKYLHICANETIHGVEFK--EYPSA----KNSTG--ILVAD  241 (430)
Q Consensus       182 ----~~~~v~~~~~~~~g~~~d~~~l~--i~----~~--~~lv~i~~~~t~tG~~~p--ei~~~----~~~g~--~lvvD  241 (430)
                          .++.|++++   .+ ..|+++|+  +.    .+  +-+|+.+...|.+|.+-|  +|.++    +++|+  +++||
T Consensus       244 lG~~~vv~VpvD~---~~-rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVD  319 (608)
T TIGR03811       244 IGLDQVIPVPVDS---NY-RMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVD  319 (608)
T ss_pred             CCcccEEEeecCC---CC-cCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeee
Confidence                366677643   33 57888876  32    22  345677788999999999  77765    36787  69999


Q ss_pred             ccCcCCC-----------Ccc-----------------------------ccccccEEEeCCCcccc-CCccEEEEEcHH
Q 043610          242 MSSNFCS-----------KPV-----------------------------DVTRFGVIYAGAQKNVG-PSGVTIVIVRKD  280 (430)
Q Consensus       242 ~a~s~G~-----------~~i-----------------------------dl~~~d~~~~s~~K~~g-p~G~g~l~v~~~  280 (430)
                      |+++...           +|.                             .++..|.++..+|||+. |.++|.+++++.
T Consensus       320 AAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~  399 (608)
T TIGR03811       320 AAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI  399 (608)
T ss_pred             ccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence            9876321           111                             12345789999999996 999999888865


Q ss_pred             HH-hccCCCCCccccccch-----hhcCCCCCCccHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHcc---
Q 043610          281 LL-GNAQDKTPLMLDYKIH-----DENNSLYNTPPCYCIYMCGLVFEYLL-ELGGLNEVEKMNRKKAELLYNVIDGS---  350 (430)
Q Consensus       281 ~~-~~~~~~~p~~~~~~~~-----~~~~~~~~T~~~~~~~a~~~al~~l~-~~~g~~~v~~~~~~l~~~l~~~l~~~---  350 (430)
                      .+ +.+. ..+.|+.....     ......-|+.+-+...++..+++.+. ...|+.++.++..++++++++.|.+.   
T Consensus       400 ~~~~~~~-~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~  478 (608)
T TIGR03811       400 RMRDVIS-YFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFK  478 (608)
T ss_pred             HHHHHHh-cCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            43 3222 22223311110     00001113433344555666777651 12489999999999999999999862   


Q ss_pred             ---CCceecCCCCCCCccceEEEEcC
Q 043610          351 ---NGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       351 ---~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                         ..+++..+.++  ...+|+|++.
T Consensus       479 ~~~~~~el~~~~~p--dlniV~Fr~~  502 (608)
T TIGR03811       479 VGDKEIEVHPLTKP--DFNMVDYVFN  502 (608)
T ss_pred             cCCCCeeEEecCCC--CcceEEEEEe
Confidence               23444211222  1246888864

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.26  E-value=6.2e-11  Score=108.12  Aligned_cols=268  Identities=13%  Similarity=0.131  Sum_probs=165.7

Q ss_pred             CCCCCcEEEEEeCcHHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--
Q 043610          129 NIPQEYSVLFLQGGATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--  204 (430)
Q Consensus       129 g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--  204 (430)
                      +..+| .+.+. -|+-|.+.+++...+-|| ++++... ..|+...+. |.-.+ +++.++...+  +  ..+.|++.  
T Consensus        83 pLt~d-nic~G-vGsDE~ID~iiR~~c~PGkeKIl~cP-PtysMY~v~-A~iNd~eVvkvpl~pd--F--~lnvdai~ev  154 (375)
T KOG0633|consen   83 PLTSD-NICVG-VGSDELIDLIIRCVCDPGKEKILDCP-PTYSMYVVD-AAINDAEVVKVPLNPD--F--SLNVDAIAEV  154 (375)
T ss_pred             CCCcc-ceEEe-cCcHHHHHHHHhheecCCccceeecC-CcceeEEEE-eecCCceEEEecCCCC--c--cccHHHHHHH
Confidence            34455 56665 578899999999998898 6666544 445543222 33456 7777777542  3  46666654  


Q ss_pred             --cCCCccEEEEeecCCCccccCC--CCccc--cCCCcEEEEeccC-cCCCC---cccccccc--EEEeCCCccccCCc-
Q 043610          205 --QNPDAKYLHICANETIHGVEFK--EYPSA--KNSTGILVADMSS-NFCSK---PVDVTRFG--VIYAGAQKNVGPSG-  271 (430)
Q Consensus       205 --i~~~~~lv~i~~~~t~tG~~~p--ei~~~--~~~g~~lvvD~a~-s~G~~---~idl~~~d--~~~~s~~K~~gp~G-  271 (430)
                        .+...|+++++++.||||.++.  .|-++  .-.+++++||+++ .|.+.   --.++++.  ++.-+++|.+|.+| 
T Consensus       155 l~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGi  234 (375)
T KOG0633|consen  155 LELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGI  234 (375)
T ss_pred             HhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCccee
Confidence              4557999999999999999999  56665  2346899999985 34331   11244553  66789999999999 


Q ss_pred             -cEEEEEcHHHHhccCCC-CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          272 -VTIVIVRKDLLGNAQDK-TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       272 -~g~l~v~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                       +|+.+.+..+.+-++.. .|               +..+.++-.++-+|+..-. ..-++.++..+.+-+.++...|.+
T Consensus       235 RvG~~~~~~~ia~iln~~KaP---------------YNiS~~~s~~AL~Als~~n-~kkme~~rdaiv~er~RL~keLt~  298 (375)
T KOG0633|consen  235 RVGYGAFPLSIAEILNRAKAP---------------YNISVAGSVAALAALSDSN-GKKMEDVRDAIVRERERLFKELTE  298 (375)
T ss_pred             EeecccccHHHHHHHHhccCC---------------ccccchhHHHHHHhcCccc-chHHHHHHHHHHHHHHHHHHHhhc
Confidence             77777777776654321 12               1122222222333443111 113567777777777788888887


Q ss_pred             cCCceecCCCCCCCccceEEEEcCCC--chhHHHHH-HHHHcCCeecC-CC--CCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEKS--DLEAEFVK-EAAKEKMVQLK-GH--RSVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~~--~~~~~~~~-~L~~~Gi~~~~-g~--~~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      ..++.-++  ....++. +.+.+.+.  ++.+.+.. .+.+.|+++.. |.  .-.|++||+.+   |+|+.+.+++.|+
T Consensus       299 v~~~~~~~--gg~daNF-iLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG---t~EentvL~k~~K  372 (375)
T KOG0633|consen  299 VPFLNDYP--GGSDANF-ILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG---TPEENTVLMKCLK  372 (375)
T ss_pred             CccccCCC--CcccccE-EEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC---CcccchHHHHHHH
Confidence            55443221  1123333 23455542  23333333 34556988643 32  23578999998   8999999999998


Q ss_pred             HHH
Q 043610          424 DFQ  426 (430)
Q Consensus       424 ~~~  426 (430)
                      .++
T Consensus       373 ~~l  375 (375)
T KOG0633|consen  373 QFL  375 (375)
T ss_pred             hhC
Confidence            763

>PRK06541 hypothetical protein; Provisional

Probab=99.24  E-value=1.4e-09  Score=111.82  Aligned_cols=321  Identities=11%  Similarity=-0.017  Sum_probs=175.0

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--C---
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--C---  155 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~---  155 (430)
                      -+|.|.+++.+++.+....  +.  .....    +...++.+.|.+++..+-+ .++|+ +||++|++.++.-.  .   
T Consensus        69 ~~p~v~~Av~~q~~~~~~~--~~--~~~~~----~~~~~la~~l~~~~p~~~~-~v~f~-~sGseAve~AlklAr~~~~~  138 (460)
T PRK06541         69 GRAELAEAAAKQAGTLAFF--PL--WSYAH----PPAIELAERLAALAPGDLN-RVFFT-TGGSEAVESAWKLAKQYFKL  138 (460)
T ss_pred             CCHHHHHHHHHHHhhCcCc--cc--cccCC----HHHHHHHHHHHHhCCCCcC-EEEEc-CCcHHHHHHHHHHHHHHHHh
Confidence            4689999999988642100  00  00111    2233555666666543333 66665 78999999775532  1   


Q ss_pred             --CC-CCcEEEEeCChhHHHHHHHH--------HHhC----CceEEecCCCC---cCCCCC------Cccccc--cC---
Q 043610          156 --TP-NDPVDYIVTGSWGDKAFKEA--------QKFC----NPQVIWSGKAE---KYTKIP------NFDALE--QN---  206 (430)
Q Consensus       156 --~~-gd~vl~~~~g~~~~~~~~~a--------~~~g----~~~~v~~~~~~---~~g~~~------d~~~l~--i~---  206 (430)
                        ++ ..+|+.+..++.|.-.....        +.++    .+..++....-   +++..+      .++.++  +.   
T Consensus       139 ~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  218 (460)
T PRK06541        139 TGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEG  218 (460)
T ss_pred             cCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC
Confidence              11 35677676665553211010        0000    11112211000   011000      012343  22   


Q ss_pred             C-CccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCCc-------cccccccEEEeCCCcccc--
Q 043610          207 P-DAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSKP-------VDVTRFGVIYAGAQKNVG--  268 (430)
Q Consensus       207 ~-~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~~-------idl~~~d~~~~s~~K~~g--  268 (430)
                      + ++.+|++--+.+..|.+.+      +|.++ +++|+++|+|++| ++|-.-       .++ +-|+++  ..|.+|  
T Consensus       219 ~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~l~~G  295 (460)
T PRK06541        219 PDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIIT--CAKGITSG  295 (460)
T ss_pred             CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEE--ecccccCC
Confidence            2 3445555445777888876      34554 5899999999998 676321       222 126554  789996  


Q ss_pred             CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          269 PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       269 p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      ..-+|.+++++++.+...+....++       ...+ ...|....+++.++|+.+.+    +.+.++.+++.+++++.|+
T Consensus       296 ~~pigav~~~~~i~~~~~~~~~~~~-------~~~T-~~gnp~~~aaala~l~~l~~----~~~~~~~~~~g~~l~~~L~  363 (460)
T PRK06541        296 YSPLGAMIASDRLFEPFLDGPTMFL-------HGYT-FGGHPVSAAVALANLDIFER----EGLLDHVRDNEPAFRATLE  363 (460)
T ss_pred             ccceeEEEEcHHHHHHhhcCCCccc-------cCCC-CCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHH
Confidence            1117888889988776432111000       0112 23455667777788887764    2456788888888888887


Q ss_pred             ccCCceecCCCCCCCccceEEEEcCCC---------ch----h-HHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHH
Q 043610          349 GSNGFYKCPVEKSVRSFMNVPFTLEKS---------DL----E-AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAG  414 (430)
Q Consensus       349 ~~~G~~~~~~~~~~rs~~iv~f~~~~~---------~~----~-~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~ed  414 (430)
                      +...+.++. +-.... ..+.+.+.+.         ..    - ..+.+.|.++|+++.+.......||+++...+|++|
T Consensus       364 ~l~~~~~v~-~vrg~G-l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~  441 (460)
T PRK06541        364 KLLDLPIVG-DVRGDG-YFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEE  441 (460)
T ss_pred             HhhcCCCeE-EEEecc-eEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHH
Confidence            642222111 111122 2233443210         00    0 135667888999986521112469999998899999


Q ss_pred             HHHHHHHHHHHHHh
Q 043610          415 VEKLVAFMKDFQAK  428 (430)
Q Consensus       415 v~~ll~~L~~~~~~  428 (430)
                      |++++++|++.+++
T Consensus       442 id~~~~~l~~~l~~  455 (460)
T PRK06541        442 FDEIEQILRSVLTE  455 (460)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998753

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.23  E-value=1e-08  Score=105.48  Aligned_cols=333  Identities=13%  Similarity=0.103  Sum_probs=178.1

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+.+.+....+...    ..    .+...++.+.|.+++....+..++|+ +
T Consensus        52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~----~~----~~~~~~la~~L~~~~p~~~~~~v~f~-~  122 (451)
T PRK06918         52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNV----MM----YEPYIELAEKLAALAPGSFDKKVLFL-N  122 (451)
T ss_pred             CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccc----cc----cHHHHHHHHHHHHhCCCCCCCEEEEc-C
Confidence            344445555543     2347899999999886521111100    01    12334566667777653321266665 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHH---------hC----CceEEecCCC--CcCCCCCC-----
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQK---------FC----NPQVIWSGKA--EKYTKIPN-----  199 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~---------~g----~~~~v~~~~~--~~~g~~~d-----  199 (430)
                      |||||+++++.-.  .....+|+.+..+|.|.-..-....         ++    .+..++....  .+.+ ..+     
T Consensus       123 sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  201 (451)
T PRK06918        123 SGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEG-LTEEQYDD  201 (451)
T ss_pred             CcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCcccccccc-CchHHHHH
Confidence            8999999876542  2334567777766655321111100         01    0111211100  0001 000     


Q ss_pred             --ccccc------cC-CCccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCc-CCC--Ccccccccc--E
Q 043610          200 --FDALE------QN-PDAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCS--KPVDVTRFG--V  258 (430)
Q Consensus       200 --~~~l~------i~-~~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~--~~idl~~~d--~  258 (430)
                        ++.++      +. +++.+|++--+....|++.+  +    |.++ +++|+++|.|+++. +|-  ..+-+..+|  -
T Consensus       202 ~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~p  281 (451)
T PRK06918        202 FMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVP  281 (451)
T ss_pred             HHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCC
Confidence              01121      12 23445555434444577666  2    4444 58999999999975 432  122222222  1


Q ss_pred             EEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 043610          259 IYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN  336 (430)
Q Consensus       259 ~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~  336 (430)
                      -+.++.|.++ .|  +|++++++++.+...+..           .+.+ ...+...+.++.++|+.+.+ +   .+.++.
T Consensus       282 Di~t~sK~l~-~G~pig~v~~~~~i~~~~~~~~-----------~~~T-~~g~~l~~aaa~a~l~~i~~-~---~~~~~~  344 (451)
T PRK06918        282 DLITVSKSLG-AGVPISGVIGRKEIMDESAPGE-----------LGGT-YAGSPLGCAAALAVLDIIEK-E---NLNDRA  344 (451)
T ss_pred             CEEeeehhhc-CCCccEEEEEcHHHHhccCCCC-----------cCcC-CCcCHHHHHHHHHHHHHHHH-C---CHHHHH
Confidence            1447899997 35  899999998877643210           1122 24566778888888987764 2   345555


Q ss_pred             HHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcC-C-------CchhHHHHHHHHHcCCeecCCCCCCCeeEEeec
Q 043610          337 RKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLE-K-------SDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIY  407 (430)
Q Consensus       337 ~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~-~-------~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~  407 (430)
                      +++.+++++.|++.. ++..+. +-..... .+.+.+. +       ......+.+.+.++||.+.++....+.+|+++.
T Consensus       345 ~~~g~~l~~~l~~l~~~~~~~~-~vrg~G~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~  422 (451)
T PRK06918        345 IELGKVVMNRFEEMKNKYNCIG-DVRGLGA-MCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMP  422 (451)
T ss_pred             HHHHHHHHHHHHHHHhhCCCce-eecccee-EEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECC
Confidence            666666666666421 121110 1111222 2233321 1       011224667778899998775322357999998


Q ss_pred             CCCCHHHHHHHHHHHHHHHHh
Q 043610          408 NAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       408 ~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...++++++++++.|++++++
T Consensus       423 l~~t~~~id~~l~~l~~~l~~  443 (451)
T PRK06918        423 LVITDEQLEEGLTIIEESLQA  443 (451)
T ss_pred             CccCHHHHHHHHHHHHHHHHH
Confidence            778899999999999998764

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.23  E-value=6.1e-10  Score=113.59  Aligned_cols=293  Identities=15%  Similarity=0.079  Sum_probs=182.3

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+.++.+..|+.||++.   ..|+++|+|.++..++++++++||.|++-.+.+-|..- . .-..| .++++....+..
T Consensus        70 G~i~eAqe~aA~~fgAd~---tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~-g-lilaGa~Pvyl~p~~np~  144 (557)
T COG1982          70 GPIKEAQELAARVFGADH---TYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHH-G-LILAGATPVYLEPSRNPL  144 (557)
T ss_pred             ccHHHHHHHHHHHhCCCc---eEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHH-H-HHHcCCceEEecCCCCcc
Confidence            456799999999999985   35666899999999999999999999998888776421 1 11236 676665533212


Q ss_pred             CC--CCCCccccc---c-CCCc-cEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--c--cc--c-ccc
Q 043610          194 YT--KIPNFDALE---Q-NPDA-KYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--P--VD--V-TRF  256 (430)
Q Consensus       194 ~g--~~~d~~~l~---i-~~~~-~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~--id--l-~~~  256 (430)
                      +|  ..++.+.++   + .+.. |+++++ +.|..|++.+  +|.+. +..++|+.+|.++.+-..  +  .+  + ...
T Consensus       145 ~gi~ggI~~~~~~~~l~~~~~~~k~~vit-npTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~  223 (557)
T COG1982         145 YGIIGGIPLETFKEALLAHPDAEKLAVIT-NPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGA  223 (557)
T ss_pred             ccccCCCCHHHHHHHHHhChhhheeEEEe-cCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCc
Confidence            43  235666665   2 4556 777775 5788999999  67775 678899999998753321  1  12  2 122


Q ss_pred             cEEEeCCCcccc-CCccEEEEEcHH-HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHH---
Q 043610          257 GVIYAGAQKNVG-PSGVTIVIVRKD-LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNE---  331 (430)
Q Consensus       257 d~~~~s~~K~~g-p~G~g~l~v~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~---  331 (430)
                      |+++-|.||.+| .+-..++.++.. .++.-+  ...++..       ....+|++..++++.. -+......|.+-   
T Consensus       224 ~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r--~nea~~~-------h~STSPsY~l~ASlD~-Ar~~~~~~G~~l~~~  293 (557)
T COG1982         224 DFVTQSTHKLLAALSQASMIHVKDGRAVNHER--FNEALMM-------HQSTSPSYPLMASLDV-ARMQEGNAGRELWQE  293 (557)
T ss_pred             eEEEechhhhhhhhhhhHHHhhCCCccCCHHH--HHHHHHH-------HccCCchHHHHHHHHH-HHHhhhhhhHHHHHH
Confidence            699999999995 777788877752 211100  0000000       0123455555555555 333333334433   


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceecCCCC---C--------------CCccceEEEEcCCCchhH-HHHHHHHHcCCeec
Q 043610          332 VEKMNRKKAELLYNVIDGSNGFYKCPVEK---S--------------VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL  393 (430)
Q Consensus       332 v~~~~~~l~~~l~~~l~~~~G~~~~~~~~---~--------------~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~  393 (430)
                      .....-++++.+++.+.+..+++++..+.   +              .--|.-+++..|+.|... .+.+.|.++|++..
T Consensus       294 ~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e  373 (557)
T COG1982         294 VIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPE  373 (557)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeee
Confidence            25666677777777777656676653221   0              012445666776667777 67778999999865


Q ss_pred             C-CCCCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          394 K-GHRSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       394 ~-g~~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      . +.. .--+=+++..-....++++|+++++.
T Consensus       374 ~~~d~-~~lll~~~~~gk~~~lv~~L~~f~r~  404 (557)
T COG1982         374 ETGDY-SNLLLFSPGIGKWQTLVDRLLEFKRR  404 (557)
T ss_pred             ecCCc-eeeEEeeeccchHHHHHHHHHHHHHh
Confidence            3 211 11233444433457788888888873

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.22  E-value=2.1e-09  Score=109.70  Aligned_cols=324  Identities=11%  Similarity=0.006  Sum_probs=181.1

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+++..|-     +--+|.|.+++.+.+.+.    ..   .....    ....++.+.|.+++.- .+ .++++ +
T Consensus        48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~----~~---~~~~~----~~~~~la~~L~~~~~~-~~-~v~~~-~  113 (426)
T PRK00062         48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG----LS---FGAPT----ELEVELAELVIELVPS-IE-MVRMV-N  113 (426)
T ss_pred             CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC----Cc---CCCCC----HHHHHHHHHHHHhCCC-CC-EEEEe-c
Confidence            345566666553     246789999999988651    11   00111    2233566666666532 23 67665 7


Q ss_pred             cHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHH------hC------CceEEecCCCCcCCCCCCccccc--c
Q 043610          142 GATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQK------FC------NPQVIWSGKAEKYTKIPNFDALE--Q  205 (430)
Q Consensus       142 gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~------~g------~~~~v~~~~~~~~g~~~d~~~l~--i  205 (430)
                      ||++|++.++....  ..+++|+..+..+.|....-....      .+      ....+.... ...- -.|+++++  +
T Consensus       114 sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~d~~~l~~~i  191 (426)
T PRK00062        114 SGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHT-LTAP-YNDLEAVEELF  191 (426)
T ss_pred             CHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccce-EEcC-CCCHHHHHHHH
Confidence            89999998877642  335678777777666421000100      01      000000000 0000 02445555  3


Q ss_pred             C---CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCC--ccccccc----cEEEeCCCccccC
Q 043610          206 N---PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSK--PVDVTRF----GVIYAGAQKNVGP  269 (430)
Q Consensus       206 ~---~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~----d~~~~s~~K~~gp  269 (430)
                      .   +++.+|++-.+...+|.+.|      +|.++ +++|+++++|++|.....  ..-.+.+    |+  .+..|.+| 
T Consensus       192 ~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi--~~~gK~l~-  268 (426)
T PRK00062        192 EEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDL--TTLGKIIG-  268 (426)
T ss_pred             HhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcch--HhhhhHhh-
Confidence            2   35677777767777898876      24444 589999999999862110  0001111    43  46689995 


Q ss_pred             Cc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 043610          270 SG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI  347 (430)
Q Consensus       270 ~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l  347 (430)
                      .|  +|+++.++++.+.+....+.+.        +.+ .+.+...++++.++|+.+.+.    +..++.+++.+++++.|
T Consensus       269 ~G~p~ga~~~~~~i~~~~~~~~~~~~--------~~T-~~~~p~~~aaa~a~L~~~~~~----~~~~~~~~~~~~~~~~l  335 (426)
T PRK00062        269 GGLPVGAFGGRREIMEQLAPLGPVYQ--------AGT-LSGNPLAMAAGLATLKLLKEP----GFYEELEALTKRLAEGL  335 (426)
T ss_pred             CCCcceeeeEHHHHHHhhccCCCcee--------ccc-CcCCHHHHHHHHHHHHHHhcc----hHHHHHHHHHHHHHHHH
Confidence            23  6788888888776532111111        112 245667788888899987532    45566666666666666


Q ss_pred             Hcc---CCceecCCCCCCCccceEEEEcCCC-----------c--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCC
Q 043610          348 DGS---NGFYKCPVEKSVRSFMNVPFTLEKS-----------D--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMP  411 (430)
Q Consensus       348 ~~~---~G~~~~~~~~~~rs~~iv~f~~~~~-----------~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t  411 (430)
                      .+.   .++...   ..... .++.+.+.+.           +  ....+...|.++||.+.+..  .+.+|++  ..++
T Consensus       336 ~~~~~~~~~~~~---vrg~G-~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~--~~~~~~~--~~~t  407 (426)
T PRK00062        336 KEAAKKAGIPLT---VNRVG-SMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ--FEAGFVS--AAHT  407 (426)
T ss_pred             HHHHHHcCCceE---EEEec-ceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC--cCceeee--ccCC
Confidence            531   233221   00112 2333433211           0  11258888889999986521  1346776  3669


Q ss_pred             HHHHHHHHHHHHHHHHhhC
Q 043610          412 LAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       412 ~edv~~ll~~L~~~~~~~~  430 (430)
                      ++|++++++.|+++++..+
T Consensus       408 ~~ei~~~~~~l~~~l~~~~  426 (426)
T PRK00062        408 DEDIEKTLEAARKAFAALA  426 (426)
T ss_pred             HHHHHHHHHHHHHHHHhhC
Confidence            9999999999999987643

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.19  E-value=6.7e-09  Score=107.80  Aligned_cols=331  Identities=12%  Similarity=0.043  Sum_probs=180.5

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEeC
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-IPQEYSVLFLQG  141 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-~~~~~~vv~~~~  141 (430)
                      .++.+.|..|-     +--+|.|.+++.+++.+... ..+   .....   .+...++.+.|.+++. .+-+ .++|. +
T Consensus        88 G~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~-~~~---~~~~~---~~~~~~lae~L~~~~~~~~~~-~v~f~-~  158 (504)
T PLN02760         88 GKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPF-YHS---FWNRT---TKPSLDLAKELLEMFTARKMG-KVFFT-N  158 (504)
T ss_pred             CCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccc-eec---ccccC---cHHHHHHHHHHHhhcCCCCCC-EEEEe-C
Confidence            44455555532     34578999999999875211 000   00001   1223455566666643 2222 56665 7


Q ss_pred             cHHHHHHHHHhhcC-------CCC-CcEEEEeCChhHHHHHHHHHHhCC-------------ceEEecCCCCcCCC-CCC
Q 043610          142 GATTQFAAVPLNLC-------TPN-DPVDYIVTGSWGDKAFKEAQKFCN-------------PQVIWSGKAEKYTK-IPN  199 (430)
Q Consensus       142 gaT~a~~~~~~sl~-------~~g-d~vl~~~~g~~~~~~~~~a~~~g~-------------~~~v~~~~~~~~g~-~~d  199 (430)
                      ||++|++.++.-..       .++ .+|+.++.++.|.-.. .....|.             +..++.  +..+.. .+.
T Consensus       159 SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~-a~slsg~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~  235 (504)
T PLN02760        159 SGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLI-SASLSGLPALHQKFDLPAPFVLHTDC--PHYWRFHLPG  235 (504)
T ss_pred             ChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHh-hhhccCChhhccCCCCCCCCcEEeCC--CcccccCCCC
Confidence            89999998776431       133 4666666565553211 1110111             111111  000100 000


Q ss_pred             ----------ccccc--c---C-CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCCc-----
Q 043610          200 ----------FDALE--Q---N-PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSKP-----  250 (430)
Q Consensus       200 ----------~~~l~--i---~-~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~~-----  250 (430)
                                .++++  +   . +++.+|++--+....|++.|      ++.++ +++|+++|+|+++ ++|-.-     
T Consensus       236 ~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~  315 (504)
T PLN02760        236 ETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGC  315 (504)
T ss_pred             CcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHH
Confidence                      12243  2   1 23556666555666688877      35554 5999999999998 565421     


Q ss_pred             --cccccccEEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          251 --VDVTRFGVIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       251 --idl~~~d~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                        .++. -|+  .++.|.+|  ..-+|.+.+++++.+.+....+.. +  . ...+.+++ -|..+.+++.++|+.++++
T Consensus       316 e~~gv~-PDi--vtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~-~--~-~~h~~T~~-gnPl~~Aaala~Le~i~~~  387 (504)
T PLN02760        316 DKYNIK-PDL--VSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKL-G--S-FAHGFTYS-GHPVSCAVALEALKIYKER  387 (504)
T ss_pred             HhcCCC-CcE--EEecccccCCccccceEeecHHHHhhhhcccccc-c--C-cccCCCCC-CCHHHHHHHHHHHHHHHhC
Confidence              1221 254  45589983  212566888988877543211100 0  0 00122333 3566778888899988642


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc-ceEEEEcCCCc-----------hhHHHHHHHHHcCCeecC
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF-MNVPFTLEKSD-----------LEAEFVKEAAKEKMVQLK  394 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~-~iv~f~~~~~~-----------~~~~~~~~L~~~Gi~~~~  394 (430)
                          .+.++.+++.+++++.|++.....++   .+.|.- ..+.+.+.+..           ....+.+.+.++||++..
T Consensus       388 ----~l~~~~~~~g~~l~~~L~~l~~~~~v---~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~  460 (504)
T PLN02760        388 ----NIPEHVNKIAPRFQDGIKAFSGSPII---GEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRV  460 (504)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHhcCCCe---eeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEe
Confidence                46777778888888888753111111   112221 23444442211           112477778889999864


Q ss_pred             CCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          395 GHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       395 g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..   ..+|+++...+|++||++++++|++.+++
T Consensus       461 ~g---~~lrl~Ppl~it~eeid~~~~~l~~al~~  491 (504)
T PLN02760        461 AG---DNIMMSPPLIITPEEVDELISIYGKALKA  491 (504)
T ss_pred             cC---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            21   36999999889999999999999988764

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.19  E-value=1.1e-08  Score=104.40  Aligned_cols=332  Identities=11%  Similarity=0.034  Sum_probs=180.7

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-     +--+|.|.+++.+++.+......    .....    +...++.+.|.+++.-+....++|. +|
T Consensus        39 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~----~~~~~----~~~~~la~~l~~~~p~~~~~~v~f~-~S  109 (425)
T PRK07495         39 GRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH----QVVPY----ENYVRLAERLNALVPGDFAKKTIFV-TT  109 (425)
T ss_pred             CCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc----CccCC----HHHHHHHHHHHHhCCCCCCCEEEEC-Cc
Confidence            34444555543     33478899999998865211000    00111    2233455566666643211266665 78


Q ss_pred             HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHH-------H--hC----CceEEecCCCCcCCCCC--Cccccc-
Q 043610          143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQ-------K--FC----NPQVIWSGKAEKYTKIP--NFDALE-  204 (430)
Q Consensus       143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~-------~--~g----~~~~v~~~~~~~~g~~~--d~~~l~-  204 (430)
                      |+||++.++.-.  .....+|+.+..++.|.-......       +  ++    .+..++...+ ..+..+  .+++++ 
T Consensus       110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~l~~  188 (425)
T PRK07495        110 GAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLAALDK  188 (425)
T ss_pred             hHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHHHHHH
Confidence            999999876642  233456776666655532111110       0  01    1112222110 011000  022233 


Q ss_pred             -cC-----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccccc--EEEeCCCcc
Q 043610          205 -QN-----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRFG--VIYAGAQKN  266 (430)
Q Consensus       205 -i~-----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~d--~~~~s~~K~  266 (430)
                       +.     +++.+|++--+...+|++.+      +|.++ +++|+++++|+++. +|-.  .+-.+.+|  .-+.++.|.
T Consensus       189 ~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~  268 (425)
T PRK07495        189 LFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKG  268 (425)
T ss_pred             HHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhh
Confidence             21     34667777655555786644      35554 58999999999976 4322  11122222  234677999


Q ss_pred             ccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          267 VGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       267 ~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      +|. |  +|++..++++.+...+.   .        ...+ ++.|...++++.++++++.+    +.+.++.+++.++++
T Consensus       269 l~~-G~pigav~~~~~i~~~~~~~---~--------~~~T-~~~~pl~~aaa~a~l~~l~~----~~l~~~~~~~g~~l~  331 (425)
T PRK07495        269 LAG-GFPLAAVTGRAEIMDAPGPG---G--------LGGT-YGGNPLGIAAAHAVLDVIEE----EDLCERANQLGNRLK  331 (425)
T ss_pred             hcC-CccceEEEEcHHHHhccCCC---C--------cCCC-CCCCHHHHHHHHHHHHHHHh----chHHHHHHHHHHHHH
Confidence            952 3  78888998887654321   0        1122 24566677888889998864    246667777777777


Q ss_pred             HHHHccCC-ceecCCCCCCCccceEEEEcCCCc-------hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610          345 NVIDGSNG-FYKCPVEKSVRSFMNVPFTLEKSD-------LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       345 ~~l~~~~G-~~~~~~~~~~rs~~iv~f~~~~~~-------~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~  416 (430)
                      +.|++... +..+ .+-..+. ..+.+.+.+..       ....+.+.+.++|++........+.+|+.+-...+++|++
T Consensus       332 ~~L~~l~~~~~~i-~~vrG~G-l~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id  409 (425)
T PRK07495        332 QRLASLRETVPEI-ADIRGPG-FMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFA  409 (425)
T ss_pred             HHHHHHHhhCCCe-eeeecCc-eEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHH
Confidence            77765211 1111 0111122 23444443211       1124777778899997542111247999999899999999


Q ss_pred             HHHHHHHHHHHh
Q 043610          417 KLVAFMKDFQAK  428 (430)
Q Consensus       417 ~ll~~L~~~~~~  428 (430)
                      ++++.|++.+++
T Consensus       410 ~~~~~l~~~l~~  421 (425)
T PRK07495        410 EALDILEASILE  421 (425)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.18  E-value=9.6e-09  Score=103.58  Aligned_cols=286  Identities=9%  Similarity=0.069  Sum_probs=166.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecC--------
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG--------  189 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~--------  189 (430)
                      .+.++.+++++|.+   .++.+ ++||.|++++....++|||.|  ..+.+|..... .....|- ..+...        
T Consensus        81 ~~LE~~vAe~lG~e---~aV~v-~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~a-hI~~~Ga-~fvDi~~d~a~~~~  152 (460)
T PRK13237         81 YHLEETVQEYYGFK---HVVPT-HQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRY-HQELNGG-IFVDIIIDEAHDAQ  152 (460)
T ss_pred             HHHHHHHHHHHCCC---eEEEe-CCHHHHHHHHHHhCCCCcCEE--CCccchHhhHH-HHHhCCc-EEEeeecccccccc
Confidence            36778999999987   46665 789999998655457899964  34445543211 1233342 233221        


Q ss_pred             CCCcCCCCCCccccc--cCC----CccEEEEeecCCCc-cccCC-----CCccc-cCCCcEEEEeccCcCCCC-------
Q 043610          190 KAEKYTKIPNFDALE--QNP----DAKYLHICANETIH-GVEFK-----EYPSA-KNSTGILVADMSSNFCSK-------  249 (430)
Q Consensus       190 ~~~~~g~~~d~~~l~--i~~----~~~lv~i~~~~t~t-G~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~-------  249 (430)
                      ...++...+|++.++  +++    ++++|.+....|.. |...+     +|.++ +++|+.++.|+++.+|..       
T Consensus       153 ~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re  232 (460)
T PRK13237        153 SDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKERE  232 (460)
T ss_pred             cCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccc
Confidence            001233357888887  543    34455555555655 66664     45555 689999999999998832       


Q ss_pred             ----ccccc-------cc-cEEEeCCCcccc-CCccEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHH
Q 043610          250 ----PVDVT-------RF-GVIYAGAQKNVG-PSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYM  315 (430)
Q Consensus       250 ----~idl~-------~~-d~~~~s~~K~~g-p~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a  315 (430)
                          ...+.       .+ |.+++|++|.++ +.| |++..+ +++.++++..+..+-+       +.++|..+.--+.+
T Consensus       233 ~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~eG-------~~tygg~~grd~~a  304 (460)
T PRK13237        233 EGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVYEG-------MPSYGGMAGRDMEA  304 (460)
T ss_pred             cccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhccccCC-------CcCCCChhhhHHHH
Confidence                12221       22 799999999995 777 777775 4566665433221111       12344444434555


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE-------cCCCchhH-HHHHHHH-
Q 043610          316 CGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT-------LEKSDLEA-EFVKEAA-  386 (430)
Q Consensus       316 ~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~-------~~~~~~~~-~~~~~L~-  386 (430)
                      ++..|+...+   .+-+..+. ...++|.+.|.+ .|+.++.  | .... -+.+.       +|...... .+...|. 
T Consensus       305 lAvgl~E~~~---~~y~~~ri-~~~~~l~~~L~~-~Gvpv~~--p-~ggH-~v~vda~~~lph~~~~~~p~~al~~~ly~  375 (460)
T PRK13237        305 MAIGIEESVQ---YEYIEHRV-GQVRYLGEKLLA-AGVPIVE--P-VGGH-AVFLDARRFLPHLPQDQFPAQALAAELYI  375 (460)
T ss_pred             HHhHHHhhch---HHHHHHHH-HHHHHHHHHHHH-CCCceec--C-CCce-EEEEEhHHhCCCCCcccChHHHHHHHHHH
Confidence            6656654332   13333333 355788889986 7887763  1 1122 22222       22222333 5777774 


Q ss_pred             HcCCeecC------CC-------CC--CCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          387 KEKMVQLK------GH-------RS--VGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       387 ~~Gi~~~~------g~-------~~--~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.||..+.      |.       ..  ..-+|+.+-- --|.+.+|-..++|..+.++
T Consensus       376 ~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~  433 (460)
T PRK13237        376 ESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH  433 (460)
T ss_pred             HhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence            45776421      11       01  2359999766 34688899999999887653

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=99.17  E-value=2.9e-09  Score=104.81  Aligned_cols=298  Identities=15%  Similarity=0.047  Sum_probs=180.5

Q ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhh-c--CC--CCCcEEEEeCChhHHH-HHHHHHHhC-CceEE
Q 043610          114 KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN-L--CT--PNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVI  186 (430)
Q Consensus       114 ~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~s-l--~~--~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v  186 (430)
                      .++-.++-..++.+||.+++ .+-..+.|+|+++.+.-.. .  ..  .|-..=.+..+...+. |-..++.++ +.+.+
T Consensus       119 ~~~e~~~Vnm~~~L~~~~~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V  197 (491)
T KOG1383|consen  119 RKLEAECVNMIANLFNAPSD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREV  197 (491)
T ss_pred             HHHHHHHHHHHHHHhcCCcc-ccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEee
Confidence            45556788899999999976 6666677888884433222 1  11  1110001112333332 444455567 78888


Q ss_pred             ecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC-CCcEEEEeccCcCCCC--------ccc
Q 043610          187 WSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN-STGILVADMSSNFCSK--------PVD  252 (430)
Q Consensus       187 ~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~-~g~~lvvD~a~s~G~~--------~id  252 (430)
                      ++.+.   ...+|+..+.  ++++|.+|+...+++++|.+-|  +|.++ .+ .++.+++|++.+--..        ++|
T Consensus       198 ~~~~~---~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fd  274 (491)
T KOG1383|consen  198 PLDEG---DYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFD  274 (491)
T ss_pred             ecccc---ceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccc
Confidence            87642   2357776654  8999999999999999999999  78886 44 9999999998652222        234


Q ss_pred             ccccc--EEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCccccccchhh-cCCCCCCccHHHHHHHHHHHHHHHHhc
Q 043610          253 VTRFG--VIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDE-NNSLYNTPPCYCIYMCGLVFEYLLELG  327 (430)
Q Consensus       253 l~~~d--~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~-~~~~~~T~~~~~~~a~~~al~~l~~~~  327 (430)
                      +..-+  -+.++.||.- .|+|+++++-+ ++++..   ..-+..+|....+ ....-|+.+-..++++.++|-.+- ++
T Consensus       275 Fr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~---q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG-~e  350 (491)
T KOG1383|consen  275 FRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPH---QLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLG-EE  350 (491)
T ss_pred             cCCCCceeEeeccceeeeeecCcEEEEEcccccccc---eEEEeccccCccccCcccccCCcccHHHHHHHHHHHhh-HH
Confidence            43333  4789999977 69998886544 444322   0001123322211 111123333344555555554444 35


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC-CchhH-HHHHHHHHcCCeecCCCCCCCeeEEe
Q 043610          328 GLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK-SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRAS  405 (430)
Q Consensus       328 g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~-~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis  405 (430)
                      |+.+..+++.+.+.+++++|++..++.++. .      ..++|.+-+ ...+. ++...|.+.|... +.+..+..+-|+
T Consensus       351 GY~~~~~~ive~~~~l~egie~i~~i~i~g-k------p~vs~~~~~s~~~~i~elsd~l~~~GW~l-nalq~P~a~Hi~  422 (491)
T KOG1383|consen  351 GYRENTQNIVETARKLREGIENIKGIKIVG-K------PLVSFILFGSNDVNIFELSDLLRKKGWIL-NALQFPAAIHIC  422 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccccceecC-C------CcEEEEEccCCccchhhhhHHHHhcCcCc-cccCCCCceEEE
Confidence            899999999999999999999977888774 2      124444432 22334 7888999999774 222222234444


Q ss_pred             ecCCCCHHH-HHHHHHHHHHHHH
Q 043610          406 IYNAMPLAG-VEKLVAFMKDFQA  427 (430)
Q Consensus       406 ~~~~~t~ed-v~~ll~~L~~~~~  427 (430)
                      +.-....++ .++|+.-|++++.
T Consensus       423 vt~~~~~~~~A~~~v~Di~~~~~  445 (491)
T KOG1383|consen  423 VTRVHAREDVADRFVADIRKVVE  445 (491)
T ss_pred             EEeeeccHHHHHHHHHHHHHHHH
Confidence            333333344 5777777776654

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.17  E-value=3.9e-08  Score=100.84  Aligned_cols=332  Identities=12%  Similarity=0.051  Sum_probs=180.1

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEe
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~  140 (430)
                      ..++.+.+..|-     +--+|.|.+++.+++.+...        .+...-..+...++.+.|.+++.-. .++.++|.+
T Consensus        37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~--------~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~  108 (442)
T TIGR00709        37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLP--------LHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPG  108 (442)
T ss_pred             CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccC--------ccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeC
Confidence            344455565553     23478999999998864110        0000001123345566677766432 112556666


Q ss_pred             CcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHH------HhC------CceEEecCCC--CcCCCC--CCcc-
Q 043610          141 GGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQ------KFC------NPQVIWSGKA--EKYTKI--PNFD-  201 (430)
Q Consensus       141 ~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~------~~g------~~~~v~~~~~--~~~g~~--~d~~-  201 (430)
                      +||+||++.++.-.  .....+|+.+..++.|.-..-...      +.+      .+..++....  .+++..  .+.+ 
T Consensus       109 ~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (442)
T TIGR00709       109 PSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNA  188 (442)
T ss_pred             CCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHH
Confidence            78999999876542  233456766666555532111110      011      1111221100  000000  0000 


Q ss_pred             ---ccc--c------CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC--Cccccccc----
Q 043610          202 ---ALE--Q------NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS--KPVDVTRF----  256 (430)
Q Consensus       202 ---~l~--i------~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~--~~idl~~~----  256 (430)
                         .++  +      ..++..|++--+....|++.+      ++.++ +++|+++|+|+++. +|-  ..+-.+.+    
T Consensus       189 ~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~P  268 (442)
T TIGR00709       189 SIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEP  268 (442)
T ss_pred             HHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCC
Confidence               011  1      135667777666777787765      34554 58999999999976 542  11222222    


Q ss_pred             cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043610          257 GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEK  334 (430)
Q Consensus       257 d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~  334 (430)
                      |+++  ..|.+|- |  +|.+.++++ .+...   +..        .+.+ ++.|..++.++.++|+.+.++    .+.+
T Consensus       269 Div~--~gK~l~~-G~Pigav~~~~~-~~~~~---~~~--------~~~T-~~gnpla~aaa~a~L~~i~~~----~l~~  328 (442)
T TIGR00709       269 DFVV--MSKAVGG-GLPLAVLLIAPE-FDAWQ---PAG--------HTGT-FRGNQLAMVTGTEALNYWKDD----NLAQ  328 (442)
T ss_pred             cEEE--EcccccC-CcccEEEEEchH-HhccC---CCc--------CCCC-CCcCHHHHHHHHHHHHHHHhc----CHHH
Confidence            6666  6899943 3  788888887 44321   111        1123 246677788888999877642    4556


Q ss_pred             HHHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcCCC--------------chhHHHHHHHHHcCCeecCCCCCC
Q 043610          335 MNRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEKS--------------DLEAEFVKEAAKEKMVQLKGHRSV  399 (430)
Q Consensus       335 ~~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~--------------~~~~~~~~~L~~~Gi~~~~g~~~~  399 (430)
                      +.+++.+++++.|++.. .+.++. +-..+. ..+.+.+.+.              .....+...+.++|+++.+.....
T Consensus       329 ~~~~~g~~l~~~L~~l~~~~~~v~-~vrG~G-l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~  406 (442)
T TIGR00709       329 NAQERGERITSFLDDMIKEHPCIG-NVRGRG-LMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREG  406 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCee-eeeccc-eEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCC
Confidence            77777777777776521 122111 111122 2233444211              011246677788999975422123


Q ss_pred             CeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          400 GGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       400 g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.||+.+...+|++|+++++++|++.+..
T Consensus       407 ~~l~~~Ppl~it~~ei~~~~~~l~~~l~~  435 (442)
T TIGR00709       407 EVFRLLCPITIDQEECEEGISRFKQAVEE  435 (442)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            47999999999999999999999987753

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.17  E-value=1.1e-08  Score=104.89  Aligned_cols=334  Identities=12%  Similarity=0.066  Sum_probs=184.6

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-     +--+|.|.+++.+.+.+......  +...  .    +...++.+.|.+++...-+ .|+|. +|
T Consensus        48 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~--~~~~--~----~~~~~la~~L~~~~p~~~~-~v~f~-~s  117 (445)
T PRK09221         48 GRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA--FQMG--H----PLAFELAERLAELAPGGLD-HVFFT-NS  117 (445)
T ss_pred             CCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc--cccC--C----HHHHHHHHHHHHhCCCCCC-EEEEe-CC
Confidence            44455555543     23478999999998865211100  0011  1    2233555666676643223 67765 78


Q ss_pred             HHHHHHHHHhhcC------C-C-CCcEEEEeCChhHHHHHHHH--------HHhC----CceEEecCC-C--CcCCCC-C
Q 043610          143 ATTQFAAVPLNLC------T-P-NDPVDYIVTGSWGDKAFKEA--------QKFC----NPQVIWSGK-A--EKYTKI-P  198 (430)
Q Consensus       143 aT~a~~~~~~sl~------~-~-gd~vl~~~~g~~~~~~~~~a--------~~~g----~~~~v~~~~-~--~~~g~~-~  198 (430)
                      |++|++.++.-..      + + ..+|+.+..++.|.-.....        +.++    .+..++... .  ..++.. +
T Consensus       118 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (445)
T PRK09221        118 GSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQP  197 (445)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChH
Confidence            9999998765321      1 2 24677676666553211000        0011    112222110 0  000000 0


Q ss_pred             -----Cccccc--c---C-CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCC--Cccccccc-
Q 043610          199 -----NFDALE--Q---N-PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCS--KPVDVTRF-  256 (430)
Q Consensus       199 -----d~~~l~--i---~-~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~--~~idl~~~-  256 (430)
                           ..++++  +   . +++.+|++--+.+..|++.|      ++.++ +++|+++++|++| ++|-  ..+-.+.+ 
T Consensus       198 ~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~g  277 (445)
T PRK09221        198 EHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFG  277 (445)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcC
Confidence                 012333  2   1 45667777667777888877      34554 5899999999997 4652  12212222 


Q ss_pred             ---cEEEeCCCccc--c-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610          257 ---GVIYAGAQKNV--G-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN  330 (430)
Q Consensus       257 ---d~~~~s~~K~~--g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~  330 (430)
                         |++  +..|.+  | ++ +|.+.+++++.+...........+    ..+.+++ .|.....++.++|+.+.+.    
T Consensus       278 v~PDi~--~~gK~l~gG~~P-i~av~~~~~i~~~~~~~~~~~~~~----~~~~T~~-~~pl~~aaa~a~L~~i~~~----  345 (445)
T PRK09221        278 VTPDII--TFAKGLTNGAIP-MGAVIASDEIYDAFMQGPEYAIEF----FHGYTYS-AHPVACAAGLATLDIYREE----  345 (445)
T ss_pred             CCCCEE--EeccccccCccc-ceeeEEcHHHHHhhccCccccccc----ccccCCC-cCHHHHHHHHHHHHHHHhc----
Confidence               554  556777  4 34 577788888877543210000000    0123333 3555667777889987642    


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc-eEEEEcCC--C--chh-HHHHHHHHHcCCeecCCCCCCCeeEE
Q 043610          331 EVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM-NVPFTLEK--S--DLE-AEFVKEAAKEKMVQLKGHRSVGGMRA  404 (430)
Q Consensus       331 ~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~-iv~f~~~~--~--~~~-~~~~~~L~~~Gi~~~~g~~~~g~iRi  404 (430)
                      .+.++.+++.+++++.|++..++..+.   +.|..+ ...+.+.+  .  ... .++.+.|.++|+++..+.   ..+|+
T Consensus       346 ~l~~~~~~~g~~l~~~l~~l~~~~~v~---~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~---~~lr~  419 (445)
T PRK09221        346 DLFERAAELAPYFEDAVHSLKGLPHVI---DIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYTG---DTIAL  419 (445)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCCCEE---EEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeecC---CEEEE
Confidence            467888999999999988642322211   122222 12233321  1  111 257788889999985431   36999


Q ss_pred             eecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          405 SIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       405 s~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ++...+|++||+++++.|++.+.+-
T Consensus       420 ~Ppl~~t~~eid~~~~~l~~~l~~~  444 (445)
T PRK09221        420 SPPLIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             ECCccCCHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999988753

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.17  E-value=3.6e-08  Score=101.00  Aligned_cols=328  Identities=13%  Similarity=0.052  Sum_probs=178.2

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-     +--+|.|.+++.+.+.+......    .....    +...++.+.|.+++..+..+.++| ++|
T Consensus        53 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~----~~~~~----~~~~~lAe~L~~~~p~~~~~~v~f-~~S  123 (441)
T PRK05769         53 GNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSL----TDFYY----EPAVELAERLVEIAPGGFEKKVFF-TNS  123 (441)
T ss_pred             CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccC----cccCC----HHHHHHHHHHHHhCCCCCCCEEEE-CCc
Confidence            33444454443     23468899999998864211100    00111    223456666767664321126666 578


Q ss_pred             HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhCC-------------ceEEecCCC--CcCC-CCC------
Q 043610          143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFCN-------------PQVIWSGKA--EKYT-KIP------  198 (430)
Q Consensus       143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g~-------------~~~v~~~~~--~~~g-~~~------  198 (430)
                      |+||++.++.-.  ....++|+.+..+|.|.-..-.......             +..++....  .+++ ..+      
T Consensus       124 GsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (441)
T PRK05769        124 GTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNA  203 (441)
T ss_pred             hHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHH
Confidence            999999876542  2334567777766655421111110001             111111000  0000 000      


Q ss_pred             Cccccc--c------CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc--cccccc----
Q 043610          199 NFDALE--Q------NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP--VDVTRF----  256 (430)
Q Consensus       199 d~~~l~--i------~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~--idl~~~----  256 (430)
                      .++.++  +      .+++.+|++--+....|++.|      +|.++ +++|+++++|+++. +|-.-  +-...+    
T Consensus       204 ~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~p  283 (441)
T PRK05769        204 VLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEP  283 (441)
T ss_pred             HHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCC
Confidence            011122  1      134566666556666788777      24444 58999999999977 44211  111122    


Q ss_pred             cEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610          257 GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM  335 (430)
Q Consensus       257 d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~  335 (430)
                      |+++  +.|.+| -..+|.+..++++.+..    +..        .+.++ +.+...++++.++|+.+.+     .+.++
T Consensus       284 Divt--~~K~l~~G~p~gav~~~~~i~~~~----~~~--------~~~T~-~g~p~~~aaa~a~L~~l~~-----~~~~~  343 (441)
T PRK05769        284 DIIT--LAKAIAGGLPLGAVIGRAELMFLP----PGS--------HANTF-GGNPVAAAAALATLEELEE-----GLLEN  343 (441)
T ss_pred             CEEE--EcccccCCcccEEEEEehhhhhcC----CCC--------CCCCC-CcCHHHHHHHHHHHHHHHH-----HHHHH
Confidence            6665  469985 12268888888875421    110        11233 2356677888888987752     56677


Q ss_pred             HHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcCCC------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecC
Q 043610          336 NRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEKS------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYN  408 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~  408 (430)
                      .+++.+++++.|.+.. .+.++ .+-..+. .++.+.+.+.      .....+.+.+.++||++.+..  ...+|+++..
T Consensus       344 ~~~~g~~l~~~L~~l~~~~~~~-~~vrg~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~--~~~lr~~p~l  419 (441)
T PRK05769        344 AQKLGEYLRKELKELKEKYEFI-GDVRGLG-LMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG--KSAIRIIPPL  419 (441)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCe-eeeecce-EEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC--CCEEEEeCCC
Confidence            7777777777776521 12211 1111122 2344444221      112247777888999986421  2469999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHh
Q 043610          409 AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       409 ~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+|++||++++++|++.+.+
T Consensus       420 ~~t~~~id~~~~~l~~~l~~  439 (441)
T PRK05769        420 IITEEEADIGLEILEEAIKE  439 (441)
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999998865

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.13  E-value=1.5e-08  Score=103.83  Aligned_cols=333  Identities=10%  Similarity=0.017  Sum_probs=182.0

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.|..|-     +--+|.|.+++.+++.+......  +...  .    +...++.+.|++++...-+ .+.|+ +|
T Consensus        45 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~--~~~~--~----~~~~~la~~l~~~~p~~~~-~v~f~-~s  114 (442)
T PRK13360         45 GRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA--FQMG--H----PKAFELANRIAEIAPGGLN-HVFFT-NS  114 (442)
T ss_pred             CCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc--CCcC--C----HHHHHHHHHHHHhCCCCCC-EEEEe-CC
Confidence            44455555543     34578999999998875211100  0011  1    2233566667676642223 66664 78


Q ss_pred             HHHHHHHHHhhcC-------CC-CCcEEEEeCChhHHHHHHHH--------HHhC----CceEEecCCC---CcCCCC-C
Q 043610          143 ATTQFAAVPLNLC-------TP-NDPVDYIVTGSWGDKAFKEA--------QKFC----NPQVIWSGKA---EKYTKI-P  198 (430)
Q Consensus       143 aT~a~~~~~~sl~-------~~-gd~vl~~~~g~~~~~~~~~a--------~~~g----~~~~v~~~~~---~~~g~~-~  198 (430)
                      |+||++.++.-..       .+ ..+|+.+..++.|.-+....        +.++    .+..++....   ..++.. +
T Consensus       115 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  194 (442)
T PRK13360        115 GSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQP  194 (442)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChH
Confidence            9999997755321       12 34677777666553211100        0011    1122222100   001000 0


Q ss_pred             -----Cccccc--c----CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCC--cccccc--
Q 043610          199 -----NFDALE--Q----NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSK--PVDVTR--  255 (430)
Q Consensus       199 -----d~~~l~--i----~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~--~idl~~--  255 (430)
                           ..++++  +    .+++.+|++--+....|.+.|      +|.++ +++|+++++|++| ++|-.  .+-.+.  
T Consensus       195 ~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g  274 (442)
T PRK13360        195 EHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFG  274 (442)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcC
Confidence                 012343  2    134556666656666788876      35554 5899999999998 56531  111111  


Q ss_pred             --ccEEEeCCCcccc---CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610          256 --FGVIYAGAQKNVG---PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN  330 (430)
Q Consensus       256 --~d~~~~s~~K~~g---p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~  330 (430)
                        -|++  ++.|.+|   .+ +|.+.+++++.+...........+    ....++ +.|.....++.++|+.+.+.    
T Consensus       275 v~PDiv--t~gK~l~gG~~P-~gav~~~~~i~~~~~~~~~~~~~~----~~~~T~-~g~pl~~aaa~a~L~~l~~~----  342 (442)
T PRK13360        275 VTPDLL--TCAKGLTNGAIP-MGAVFVSSEIHDAFMQGPEAGIEF----FHGYTY-SGHPLACAAALATLDLYERE----  342 (442)
T ss_pred             CCCcee--eeeeccccCccc-eEEEEEcHHHHHHhhcCCcccccc----ccCCCC-CCCHHHHHHHHHHHHHHHhC----
Confidence              2554  6689993   22 566778888876532110000000    011232 34667788888899987642    


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc-eEEEEcCC--Cc---hhHHHHHHHHHcCCeecCCCCCCCeeEE
Q 043610          331 EVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM-NVPFTLEK--SD---LEAEFVKEAAKEKMVQLKGHRSVGGMRA  404 (430)
Q Consensus       331 ~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~-iv~f~~~~--~~---~~~~~~~~L~~~Gi~~~~g~~~~g~iRi  404 (430)
                      .+.++.+++.+++++.|.+...+..+.   +.|..+ ...+.+.+  ..   ...++..+|.++||++....   +.+|+
T Consensus       343 ~l~~~~~~~g~~l~~~l~~l~~~~~v~---~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~---~~lr~  416 (442)
T PRK13360        343 GLLTRAARLAPYWEDALHSLRDAPHVI---DIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG---DILAL  416 (442)
T ss_pred             CHHHHHHHHHHHHHHHHHHhhcCCCee---eeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC---CEEEE
Confidence            366777888888888887532222111   112211 11222211  11   11257778888999876421   36999


Q ss_pred             eecCCCCHHHHHHHHHHHHHHHHh
Q 043610          405 SIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       405 s~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++...+|++|||++++.|++.+++
T Consensus       417 ~Ppl~~t~~eid~~~~~l~~~l~~  440 (442)
T PRK13360        417 SPPLIIEEAQIDELFDILAQALKE  440 (442)
T ss_pred             eCCCccCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998864

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.13  E-value=1.1e-08  Score=104.41  Aligned_cols=317  Identities=9%  Similarity=0.014  Sum_probs=177.2

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-----
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-----  155 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-----  155 (430)
                      -.|.|.+++.+++.+......    .....    +...++.+.|.+++...-+ .++|. +||++|++.++.-..     
T Consensus        61 ~~p~v~~ai~~q~~~~~~~~~----~~~~~----~~~~~lae~L~~~~p~~~~-~v~f~-~sGseAve~AlklAr~~~~~  130 (429)
T PRK06173         61 NHPRLNAAATNQLAKMSHIMF----GGFTH----EPAVELAQKLLEILPPSLN-KIFFA-DSGSVAVEVAMKMALQYQQA  130 (429)
T ss_pred             CCHHHHHHHHHHHHhcCCccc----cccCC----HHHHHHHHHHHhhCCCCcC-EEEEe-CCchHHHHHHHHHHHHHHHH
Confidence            468999999998865211100    00011    2234555666666543223 66665 789999997755321     


Q ss_pred             --CCC-CcEEEEeCChhHHHHHHHHH-------H--hC----CceEEecCCCCcCCC---CCCccccc--c---CCCccE
Q 043610          156 --TPN-DPVDYIVTGSWGDKAFKEAQ-------K--FC----NPQVIWSGKAEKYTK---IPNFDALE--Q---NPDAKY  211 (430)
Q Consensus       156 --~~g-d~vl~~~~g~~~~~~~~~a~-------~--~g----~~~~v~~~~~~~~g~---~~d~~~l~--i---~~~~~l  211 (430)
                        ++| .+|+.+..++.|.-+.....       +  ++    .+..++.... .++.   .-++++++  +   .+++..
T Consensus       131 ~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~l~~l~~~i~~~~~~iAA  209 (429)
T PRK06173        131 KGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFGEEWNDEAIEPLQDLLEQKGDEIAA  209 (429)
T ss_pred             hCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccchhHHHHHHHHHHHHHHhCCCcEEE
Confidence              133 45666666665532211110       0  01    1112221100 0100   00123343  3   234556


Q ss_pred             EEEeec-CCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c-----cccccccEEEeCCCcccc---CCcc
Q 043610          212 LHICAN-ETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P-----VDVTRFGVIYAGAQKNVG---PSGV  272 (430)
Q Consensus       212 v~i~~~-~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~-----idl~~~d~~~~s~~K~~g---p~G~  272 (430)
                      |++--. ....|++.+      ++.++ +++|+++++|++|. +|--  .     .++ .-|+++  +.|.+|   ++ +
T Consensus       210 vi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~~p-~  285 (429)
T PRK06173        210 LILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMC--IGKALTGGYLT-L  285 (429)
T ss_pred             EEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEE--eehhhhCCccc-c
Confidence            666443 566687766      34554 58999999999984 3311  1     122 136665  789983   23 4


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG  352 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G  352 (430)
                      +.+++++++.+...+.....+      ..+.++ ..|.....++.++|+.+.++    .+.++.+++.+++++.|++..+
T Consensus       286 ~a~~~~~~i~~~~~~~~~~~~------~~~~T~-~g~p~~~aaa~a~l~~i~~~----~~~~~~~~~g~~l~~~L~~~~~  354 (429)
T PRK06173        286 SATITTEAIAQTICSGEAKCF------MHGPTF-MANPLACAIAAESIRLLLES----PWQQNIQRIEAQLKQELAPAAE  354 (429)
T ss_pred             ceEEecHHHHHHHhcCCCCcc------ccCCCC-CcCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHhhc
Confidence            667778887665321000000      011122 34667788888899988642    3477778888888888875323


Q ss_pred             ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          353 FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       353 ~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +..+. +-..++ .++.+.+.+......+.+.|.++|+++.+..   ..||+.+-...+++|++++++.|++.++.
T Consensus       355 ~~~v~-~vRg~G-l~~~iel~~~~~~~~i~~~l~e~Gi~v~~~g---~~l~~~Ppl~it~~ei~~~~~~l~~~l~~  425 (429)
T PRK06173        355 FDSVA-EVRVLG-AIGVVEMKEPVNMATLQPRFVEHGIWVRPFG---KLVYIMPPFIISPDELSQLTSGLLRVLKQ  425 (429)
T ss_pred             CCCee-eeeccc-eEEEEEeCCcccHHHHHHHHHHCCeEEEecC---CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence            33221 111123 3455666542212368888999999985421   37999999999999999999999998764

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.11  E-value=4.4e-08  Score=100.48  Aligned_cols=330  Identities=8%  Similarity=-0.001  Sum_probs=179.3

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+.+.+......    ....    .+...++.+.|++++.....+.|+|. +
T Consensus        40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~----~~~~----~~~~~~lae~L~~~~p~~~~~~v~f~-~  110 (445)
T PRK08593         40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTP----AYMY----HEPLVRLAKKLCELAPGDFEKRVTFG-L  110 (445)
T ss_pred             CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccc----cccC----CHHHHHHHHHHHHhCCCCCCCEEEEC-C
Confidence            344455554442     33478999999998865211110    0001    12334566667777643321266664 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHH-HHH--------hC----CceEEecCCCC--cCCCC-CC----
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKE-AQK--------FC----NPQVIWSGKAE--KYTKI-PN----  199 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~-a~~--------~g----~~~~v~~~~~~--~~g~~-~d----  199 (430)
                      ||++|++.++.-.  .....+|+.+..++.|.-.... ...        ++    .+..++.....  .++.. .+    
T Consensus       111 SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  190 (445)
T PRK08593        111 SGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEE  190 (445)
T ss_pred             chHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHH
Confidence            8999999876632  2223456666666655311111 000        11    11222221100  00000 00    


Q ss_pred             -ccccc--c-----CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCCc--ccccc----cc
Q 043610          200 -FDALE--Q-----NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSKP--VDVTR----FG  257 (430)
Q Consensus       200 -~~~l~--i-----~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~~--idl~~----~d  257 (430)
                       +++++  +     .+++.+|++--+....|++.|      ++.++ +++|+++++|+++ ++|-.-  +-.+.    .|
T Consensus       191 ~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD  270 (445)
T PRK08593        191 YLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD  270 (445)
T ss_pred             HHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC
Confidence             01222  1     245667777666667788755      34454 5899999999997 454211  11111    25


Q ss_pred             EEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610          258 VIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM  335 (430)
Q Consensus       258 ~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~  335 (430)
                      ++  +..|.+|  .+ +|++..++++.+..... .          ...+ +..|.....++.++|+.++++    .+.++
T Consensus       271 i~--t~gK~l~~G~p-~gav~~~~~i~~~~~~~-~----------~~~T-~~~~pl~~aaa~a~l~~l~~~----~l~~~  331 (445)
T PRK08593        271 LM--SFGKSLAGGMP-MSAIVGRKEIMESLEAP-A----------HLFT-TGANPVSCAAALATIDMIEDE----SLLQR  331 (445)
T ss_pred             Ee--eecccccCCcc-cEEEEEcHHHHhhhccC-C----------CCCC-CCCCHHHHHHHHHHHHHHHhc----cHHHH
Confidence            44  5689884  23 68888899887754210 0          0112 234556778888899887642    46667


Q ss_pred             HHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcCC--------CchhHHHHHHHHHcCCeecCCCCCCCeeEEee
Q 043610          336 NRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEK--------SDLEAEFVKEAAKEKMVQLKGHRSVGGMRASI  406 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~--------~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~  406 (430)
                      .+++.+++++.|.+.. .+.++. +-.-+.. .+.+.+..        .....++...|.++||++.+.  ....+|+++
T Consensus       332 ~~~~g~~l~~~L~~l~~~~~~v~-~vrG~Gl-~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~--~~~~lr~~p  407 (445)
T PRK08593        332 SAEKGEYARKRFDQWVSKYNFVG-DVRGYGL-SIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV--AGNVLRFQP  407 (445)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEE-EEeccce-EEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc--CCCEEEEEC
Confidence            7777777777776521 111110 1001111 12222211        011125778888899987542  124799999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHh
Q 043610          407 YNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       407 ~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...+|++||++++++|++.+++
T Consensus       408 ~l~~t~~~id~~~~~l~~~l~~  429 (445)
T PRK08593        408 PLVITYEQLDTALNTIEQAFTA  429 (445)
T ss_pred             CCccCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988754

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.11  E-value=2.8e-08  Score=102.39  Aligned_cols=304  Identities=13%  Similarity=0.053  Sum_probs=165.9

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g  158 (430)
                      -+|.|.+++.+++.+..    . +  ....    +...++.+.|.+.+.. .+ .+.|. +|||||++.++.-.  ....
T Consensus       116 ~~p~v~~av~~ql~~~~----~-~--~~~~----~~~~~lAe~l~~~~p~-~~-~v~f~-~SGsEA~e~AlklAR~~tgr  181 (474)
T PLN02482        116 ADDEVLAALAETMKKGT----S-F--GAPC----LLENVLAEMVIDAVPS-VE-MVRFV-NSGTEACMGVLRLARAYTGR  181 (474)
T ss_pred             CCHHHHHHHHHHHhhCC----C-C--CCCC----HHHHHHHHHHHHhCCC-CC-EEEEe-CChHHHHHHHHHHHHHhcCC
Confidence            36899999999886421    1 1  1111    1223445555555532 22 67765 78999999775543  2334


Q ss_pred             CcEEEEeCChhHHH-HHHHHHHh-CCce-EEecCC--C---------CcCCCCCCccccc--cC---CCccEEEEeecCC
Q 043610          159 DPVDYIVTGSWGDK-AFKEAQKF-CNPQ-VIWSGK--A---------EKYTKIPNFDALE--QN---PDAKYLHICANET  219 (430)
Q Consensus       159 d~vl~~~~g~~~~~-~~~~a~~~-g~~~-~v~~~~--~---------~~~g~~~d~~~l~--i~---~~~~lv~i~~~~t  219 (430)
                      ++|+.+..+|.|.. +.. +... +... ..+...  +         -++   -|+++++  +.   +++.+|++--+..
T Consensus       182 ~~Ii~~~g~YHG~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---nd~~~l~~~l~~~~~~iAavI~Epv~g  257 (474)
T PLN02482        182 EKIIKFEGCYHGHADSFL-VKAGSGVATLGLPDSPGVPKAATSATLTAPY---NDLEAVKKLFEANKGEIAAVILEPVVG  257 (474)
T ss_pred             CEEEEECCccCCCcchhh-hhcCCCccccCCCCCCCCCCCCCCCeEEecC---CChHHHHHHHHhCCCceEEEEECCCCC
Confidence            56776666665521 111 1111 1000 000000  0         001   1345554  32   3466676666666


Q ss_pred             CccccCC------CCccc-cCCCcEEEEeccCcCCCC--------ccccccccEEEeCCCcccc--CCccEEEEEcHHHH
Q 043610          220 IHGVEFK------EYPSA-KNSTGILVADMSSNFCSK--------PVDVTRFGVIYAGAQKNVG--PSGVTIVIVRKDLL  282 (430)
Q Consensus       220 ~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~--------~idl~~~d~~~~s~~K~~g--p~G~g~l~v~~~~~  282 (430)
                      ..|.+.|      .+.++ +++|+++|+|+++. |..        ..++ .-|++  ++.|.+|  .+ +|.+..++++.
T Consensus       258 ~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~~ga~~~~gv-~PDi~--t~gK~lggG~P-igav~g~~ei~  332 (474)
T PLN02482        258 NSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAYGGAQEYFGI-TPDLT--TLGKVIGGGLP-VGAYGGRREIM  332 (474)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCcchHhHHhCC-CCCEE--EecchhhCCCc-eEEEEEcHHHH
Confidence            6788877      25554 58999999999985 321        1122 12554  5589994  22 56678899988


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---CCceecCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---NGFYKCPVE  359 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~G~~~~~~~  359 (430)
                      +.+.+..++++        +.++ ..|.....+..++|+.+++    +.+.++..++.++++++|.+.   .|+.+..  
T Consensus       333 ~~~~~~~~~~~--------~~T~-~gnpl~~aAala~L~~l~~----~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~--  397 (474)
T PLN02482        333 EMVAPAGPMYQ--------AGTL-SGNPLAMTAGIHTLKRLQQ----PGTYEYLDKITKKLIQGILEAGKKAGHEMCG--  397 (474)
T ss_pred             HhhccCCCccc--------ccCc-chhHHHHHHHHHHHHHHhc----cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEE--
Confidence            76532112111        1121 2456667777788987763    246677777777777777652   2222211  


Q ss_pred             CCCCccceEEEEcCC-----------Cch--hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEK-----------SDL--EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~-----------~~~--~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ...++  ++.+.+..           .+.  ...+...|.++||++.+.....+    .+...+|++|||++++++++++
T Consensus       398 ~~v~g--~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~~----~psl~ht~~dId~~l~al~~~l  471 (474)
T PLN02482        398 GYISG--MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEAG----FTSLAHTEEDIDFTIAAAERVL  471 (474)
T ss_pred             cccce--EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCCC----cCCCCCCHHHHHHHHHHHHHHH
Confidence            11233  22222211           011  11467778889999765211111    1455679999999999999987


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       472 ~~  473 (474)
T PLN02482        472 AR  473 (474)
T ss_pred             Hh
Confidence            64

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.10  E-value=2.7e-08  Score=101.53  Aligned_cols=324  Identities=10%  Similarity=0.057  Sum_probs=172.5

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.++.+.+..|-     +--.|.|.+++.+.+.+..     .+..  ..+    ...++.+.|.+++....+ .+.|. +
T Consensus        51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-----~~~~--~~~----~~~~la~~L~~~~~~~~~-~v~f~-~  117 (433)
T PRK00615         51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT-----SYGL--TSE----QEILFAEELFSYLGLEDH-KIRFV-S  117 (433)
T ss_pred             CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC-----CCCC--CCH----HHHHHHHHHHHhCCCCcC-EEEEe-C
Confidence            344455555553     2347899999999886421     1111  122    223455556666654323 67775 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHH-HHHHHHHh-CCc-----eEEecCCCCcCCC---CCCccccc--c--
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDK-AFKEAQKF-CNP-----QVIWSGKAEKYTK---IPNFDALE--Q--  205 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~-~~~~a~~~-g~~-----~~v~~~~~~~~g~---~~d~~~l~--i--  205 (430)
                      ||+||++.++.-.  .....+|+.+..++.|.. +...+... +..     .............   -.|.++++  +  
T Consensus       118 SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  197 (433)
T PRK00615        118 SGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNS  197 (433)
T ss_pred             chHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHh
Confidence            8999999876643  222345666665655521 10001111 110     0000000000000   01344454  3  


Q ss_pred             -CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-C--CCC----ccccccccEEEeCCCcccc--
Q 043610          206 -NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-F--CSK----PVDVTRFGVIYAGAQKNVG--  268 (430)
Q Consensus       206 -~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~--G~~----~idl~~~d~~~~s~~K~~g--  268 (430)
                       .++..+|++--+....|.+.|      +|.++ +++|+++++|++|. +  |..    ..++ .-|+++  +.|.+|  
T Consensus       198 ~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv-~PDi~~--~gK~lggG  274 (433)
T PRK00615        198 LGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHV-KPDITV--YGKILGGG  274 (433)
T ss_pred             cCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCC-CCCeEE--EcccccCC
Confidence             244566666556666788777      35554 58999999999984 3  111    1122 125654  689994  


Q ss_pred             CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          269 PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       269 p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      .+ +|++.+++++.+.+.+..+.+.        +.++ +.|....+++.++|+.+.++    .+.++.+++.+++.+.|+
T Consensus       275 ~p-~~av~~~~~i~~~~~~~~~~~~--------~~T~-~g~p~~~aa~la~L~~i~~~----~~~~~~~~~g~~l~~~l~  340 (433)
T PRK00615        275 LP-AAAVVAHKSIMDHLAPEGTIFQ--------AGTL-SGNPLAMAAGKASINLCREQ----GFYTQLSTLEQNFLSPIE  340 (433)
T ss_pred             cc-eeeeeecHHHHhhhcCCCCccc--------CCCC-cccHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHH
Confidence            34 5888889998776532111111        1121 24666788888899987642    345566666666655554


Q ss_pred             cc---CCceecCCCCCCCccceEEEEcCCC-------------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCH
Q 043610          349 GS---NGFYKCPVEKSVRSFMNVPFTLEKS-------------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL  412 (430)
Q Consensus       349 ~~---~G~~~~~~~~~~rs~~iv~f~~~~~-------------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~  412 (430)
                      +.   .|+.+..+    |....+.+.+.+.             .....+...|.++||+..+...  +.  ..+...+|+
T Consensus       341 ~~~~~~g~~v~~~----r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~--~~ls~~ht~  412 (433)
T PRK00615        341 EMIRSQGFPVSLV----RYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPF--EA--SFLSSAHSM  412 (433)
T ss_pred             HHHHHcCCCeEEE----eeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccc--cc--cceecCCCH
Confidence            31   34432110    1112333333210             1112577788889998765321  11  134445599


Q ss_pred             HHHHHHHHHHHHHHHh
Q 043610          413 AGVEKLVAFMKDFQAK  428 (430)
Q Consensus       413 edv~~ll~~L~~~~~~  428 (430)
                      +||+++++++++++++
T Consensus       413 ~did~~~~a~~~~~~~  428 (433)
T PRK00615        413 ENLDYAQNVLIDSLEK  428 (433)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998764

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.10  E-value=1e-07  Score=98.04  Aligned_cols=330  Identities=15%  Similarity=0.059  Sum_probs=180.4

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.++.+.+..|-     +--+|.|.+++.+.+.+......+   ..+ +    ....++.+.|.+++....+ .+.|. +
T Consensus        51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~---~~~-~----~~~~~lae~L~~~~p~~~~-~v~f~-~  120 (457)
T PRK05639         51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG---YTH-S----ERAIRVAEKLAEISPIENP-KVLFG-L  120 (457)
T ss_pred             CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccC---ccC-C----HHHHHHHHHHHhhCCCCcC-EEEEe-C
Confidence            344455555553     334789999999988652111000   011 1    2233566666666653323 67765 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHH-------H--hC----CceEEecCCCC--cCCC--CCCcc-
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQ-------K--FC----NPQVIWSGKAE--KYTK--IPNFD-  201 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~-------~--~g----~~~~v~~~~~~--~~g~--~~d~~-  201 (430)
                      ||+||++.++.-.  .....+|+....++.|.-......       +  ++    .+..++.....  +++.  ..+.+ 
T Consensus       121 SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  200 (457)
T PRK05639        121 SGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDE  200 (457)
T ss_pred             chHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHH
Confidence            8999999775543  233456766666665532111110       0  11    11222221100  0000  00111 


Q ss_pred             -------ccc--c------CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------cc
Q 043610          202 -------ALE--Q------NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PV  251 (430)
Q Consensus       202 -------~l~--i------~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~i  251 (430)
                             .++  +      .+++..|++--.....|++.|      ++.++ +++|+++++|++|. +|--       ..
T Consensus       201 ~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~  280 (457)
T PRK05639        201 LINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWF  280 (457)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhc
Confidence                   122  1      235666666555666677776      35554 58999999999976 4311       12


Q ss_pred             ccccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610          252 DVTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN  330 (430)
Q Consensus       252 dl~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~  330 (430)
                      ++ +-|+++  +.|.+| -.++|.+..++++.+.. . .. +         ..++ ..|.....++.++|+.+.+.    
T Consensus       281 gv-~PDiv~--~gK~l~gG~pi~av~~~~~i~~~~-~-~~-~---------~~T~-~g~p~~~aaa~a~l~~l~~~----  340 (457)
T PRK05639        281 EV-KPDLII--FGKGVASGMGLSGVIGRKELMDLT-S-GS-A---------LLTP-AANPVISAAAEATLEIIEEE----  340 (457)
T ss_pred             CC-CCCEEE--echhhcCCCcceeEEehHHHHhhc-C-CC-c---------ccCC-CcCHHHHHHHHHHHHHHHHc----
Confidence            22 237666  689994 33478899999987621 1 00 0         1122 23555677777889887642    


Q ss_pred             HHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEEEEcCC-C-----chhHHHHHHHHHcCCeecCCCCCCCeeE
Q 043610          331 EVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLEK-S-----DLEAEFVKEAAKEKMVQLKGHRSVGGMR  403 (430)
Q Consensus       331 ~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~~-~-----~~~~~~~~~L~~~Gi~~~~g~~~~g~iR  403 (430)
                      .+.++.+++.++|++.|++. .++.++. +-.-+. ..+.+.+.+ .     .....+.+.+.++|+++.........+|
T Consensus       341 ~l~~~~~~~g~~l~~~L~~l~~~~~~~~-~VrG~G-l~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr  418 (457)
T PRK05639        341 NLLKNALKVGEFIKKRLLEMKESFEVIG-DVRGKG-LMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIR  418 (457)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCCEE-eeccce-eEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEE
Confidence            45566666777777777652 1222211 111122 123333311 1     1122577788889999864211134799


Q ss_pred             EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          404 ASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       404 is~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +++....|++|+++++++|++.++.
T Consensus       419 ~~Ppl~it~~~id~~~~~l~~~l~~  443 (457)
T PRK05639        419 ITPPLVITKEIAEKGLEIMERAIKD  443 (457)
T ss_pred             EeCCCccCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998753

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.10  E-value=1.3e-08  Score=99.41  Aligned_cols=289  Identities=15%  Similarity=0.136  Sum_probs=168.8

Q ss_pred             HHHHHHHHHHHHHhCCCC--CcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCC
Q 043610          115 SIIEKAESDLRALLNIPQ--EYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAE  192 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~--~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~  192 (430)
                      +++..++......++.+.  +-.+++ ++|.|.|+..++..++++||+|++ +.-.|.. +.+..+..| +.++++.-+ 
T Consensus       104 eLl~fik~h~~~~ih~p~~~~wdiii-t~G~t~~l~~~l~~~~N~gd~vli-e~~ty~~-AL~s~~a~g-v~~ipv~md-  178 (472)
T KOG0634|consen  104 ELLLFIKDHNRPTIHAPPYKNWDIII-TNGNTDGLFKVLRTLINRGDHVLI-EEYTYPS-ALQSMEALG-VKIIPVKMD-  178 (472)
T ss_pred             HHHHHHHHhccccccCCCCCCceEEE-ecCCchHHHHHHHHhhcCCCceEE-ecccchH-HHHhccccC-ceEEecccc-
Confidence            344444444443445542  223555 688999999999999999999985 4333432 234455567 445555322 


Q ss_pred             cCCCCCCccccc-----cC------CCccE-EEEeecCCCccccCC-C----Cccc-cCCCcEEEEeccCcCCCCc----
Q 043610          193 KYTKIPNFDALE-----QN------PDAKY-LHICANETIHGVEFK-E----YPSA-KNSTGILVADMSSNFCSKP----  250 (430)
Q Consensus       193 ~~g~~~d~~~l~-----i~------~~~~l-v~i~~~~t~tG~~~p-e----i~~~-~~~g~~lvvD~a~s~G~~~----  250 (430)
                      ..|  +++|.|+     .+      |++++ -.|...+||||..++ |    |-++ ++|+.++|-|..+.+-.++    
T Consensus       179 ~~G--i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~  256 (472)
T KOG0634|consen  179 QDG--IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNP  256 (472)
T ss_pred             CCC--CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCC
Confidence            234  5666554     12      33443 455677999999999 3    5555 6999999999988765543    


Q ss_pred             --------cc--------c---cccc----E-EEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCC
Q 043610          251 --------VD--------V---TRFG----V-IYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSL  304 (430)
Q Consensus       251 --------id--------l---~~~d----~-~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~  304 (430)
                              .+        +   -..|    | =..|++|-++| |  +||+..++-.++++       ++....    .+
T Consensus       257 ~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaP-GlRlG~it~~~~~l~ri-------l~~ae~----~t  324 (472)
T KOG0634|consen  257 SLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAP-GLRLGWITGNSLFLKRI-------LDLAEV----AT  324 (472)
T ss_pred             CccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcC-cceeEEeecCHHHHHHH-------hhhcce----ee
Confidence                    00        1   1112    3 35889999987 5  89998888887763       121110    01


Q ss_pred             CCCccHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHccC--C-ceecCCCCCCCccceEEEEcC-----
Q 043610          305 YNTPPCYCIYMCGLVFEYLLEL---GGLNEVEKMNRKKAELLYNVIDGSN--G-FYKCPVEKSVRSFMNVPFTLE-----  373 (430)
Q Consensus       305 ~~T~~~~~~~a~~~al~~l~~~---~g~~~v~~~~~~l~~~l~~~l~~~~--G-~~~~~~~~~~rs~~iv~f~~~-----  373 (430)
                       -.|+...+..+.+.|+.-.++   ..+..++..+.++++.+..++.+.+  + +++.+  |  .+.+=+.+.++     
T Consensus       325 -~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~--P--~aGmFiwv~i~~~~~~  399 (472)
T KOG0634|consen  325 -SGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHP--P--KAGMFIWVEIPYINFD  399 (472)
T ss_pred             -cCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEec--C--CcceEEEEEecccccc
Confidence             123334444444444332221   1245566666777888888888753  2 23322  1  23344556675     


Q ss_pred             --CCchhH--HHH-HHHHHcCCeecCCCCC--------CC-eeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          374 --KSDLEA--EFV-KEAAKEKMVQLKGHRS--------VG-GMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       374 --~~~~~~--~~~-~~L~~~Gi~~~~g~~~--------~g-~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                        + ..++  ++. ..+.+.||..+.|...        .. .+|+|+..+ ..|++++.++.|...++.|
T Consensus       400 ~~~-~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike~  467 (472)
T KOG0634|consen  400 TKK-SINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKEH  467 (472)
T ss_pred             ccc-chHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHHH
Confidence              2 2332  333 4567789998877531        12 799999854 4557666666666666544

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.07  E-value=2.2e-08  Score=99.89  Aligned_cols=309  Identities=12%  Similarity=0.061  Sum_probs=172.4

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++++++.+....+.     ....    +...++.+.|+++++.+   .++++ +
T Consensus        22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-----~~~~----~~~~~la~~l~~~~~~~---~v~~~-~   88 (364)
T PRK04013         22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP-----MFEH----EEKEEMLEELSKWVNYE---YVYMG-N   88 (364)
T ss_pred             CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC-----CcCC----HHHHHHHHHHHhhcCCC---EEEEe-C
Confidence            344455555543     23468899999998875321111     1111    33446667788887543   67775 7


Q ss_pred             cHHHHHHHHHhhc-CCCC-CcEEEEeCChhHHHHHHHHHHhC-Cce---EEecCCCCcCCCCCCccccc--cCCCccEEE
Q 043610          142 GATTQFAAVPLNL-CTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQ---VIWSGKAEKYTKIPNFDALE--QNPDAKYLH  213 (430)
Q Consensus       142 gaT~a~~~~~~sl-~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~---~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~  213 (430)
                      |+|+|+++++.-. ...| ++|+.+..++.|.-..... ..+ ...   .-+...+-..-...|.++++  +.+++..|+
T Consensus        89 SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls-~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~aAvi  167 (364)
T PRK04013         89 SGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALS-ATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKETAAVI  167 (364)
T ss_pred             chHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhcc-CCCCcccccCCCCCCCCcEEecCCCHHHHHHHhcCCcEEEE
Confidence            8999999887654 2234 7888777666553211111 011 000   00000000000012445555  567888888


Q ss_pred             EeecCCCccccCC------CCccc-cCCCcEEEEeccCc---CCCCccccccc----cEEEeCCCcccc--CCccEEEEE
Q 043610          214 ICANETIHGVEFK------EYPSA-KNSTGILVADMSSN---FCSKPVDVTRF----GVIYAGAQKNVG--PSGVTIVIV  277 (430)
Q Consensus       214 i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s---~G~~~idl~~~----d~~~~s~~K~~g--p~G~g~l~v  277 (430)
                      +-......|...+      ++.++ +++|+++++|++++   .|. .+..+.+    |+++.  .|.+|  .+ +|.++.
T Consensus       168 vEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~-~~a~~~~gv~PDiv~~--gK~lggG~P-~~a~~~  243 (364)
T PRK04013        168 FEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGK-FLAIEHYKVEPDIVTM--GKGIGNGVP-VSLTLT  243 (364)
T ss_pred             EcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCc-hhHHHhcCCCCCEEEe--cccccCCce-eEEEEe
Confidence            8877777777765      24444 58999999999987   121 1122222    45544  78883  33 455556


Q ss_pred             cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecC
Q 043610          278 RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP  357 (430)
Q Consensus       278 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~  357 (430)
                      +++..       +..        .++++ ..|..+..++.++|+.++++ ++   .++.++.   +. .+.. .   .+.
T Consensus       244 ~~~~~-------~~~--------~~~T~-~gnp~~~aaa~a~l~~i~~~-~l---~~~~~~~---l~-~l~~-~---~v~  295 (364)
T PRK04013        244 NFDVE-------RGK--------HGSTF-GGNPLACKAVAVTLRILRRE-RL---VEKAGEK---FI-EIKG-E---RVV  295 (364)
T ss_pred             ccccc-------CCC--------cCCCC-CcCHHHHHHHHHHHHHHHhc-cH---HHHHHHH---HH-Hhcc-C---cce
Confidence            65531       100        11222 34666778888889988753 33   3332222   21 2221 1   111


Q ss_pred             CCCCCCcc-ceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          358 VEKSVRSF-MNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       358 ~~~~~rs~-~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       +  .|.. ..+.+.+.+ . ...+.+.+.++|+++....  ...+|+.+-...+++|++.+++.|++.+++
T Consensus       296 -~--vRG~Gl~~gve~~~-~-~~~i~~~~~~~Gll~~~~g--~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~  360 (364)
T PRK04013        296 -T--TRGRGLMIGIVLKK-P-VGKYVEELQNRGYLVHTAG--QRVIRLLPPLIISKDTMEEAKSAIEGVIND  360 (364)
T ss_pred             -e--eeeCcEEEEEEeCC-c-HHHHHHHHHhCCcEEeeCC--CCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence             1  2222 223445532 1 2368888889999975421  246999999999999999999999998764

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.07  E-value=2.2e-08  Score=101.97  Aligned_cols=330  Identities=10%  Similarity=-0.015  Sum_probs=180.5

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.|..|-     +--.|.|.+++.+++.+......    .....    +...++.+.|.+++..+-+ .++|. +|
T Consensus        39 G~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~----~~~~~----~~~~~lae~L~~~~p~~~~-~v~f~-~S  108 (422)
T PRK05630         39 GSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMF----GGLTH----EPAIKLTRKLLNLTDNGLD-HVFYS-DS  108 (422)
T ss_pred             CCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCccc----CCcCC----HHHHHHHHHHHhhCCCCcC-EEEEe-CC
Confidence            33444454442     33478999999998875221100    00111    2233555666666543223 66665 78


Q ss_pred             HHHHHHHHHhhcC-------CCC-CcEEEEeCChhHHHHHHHHHH---------hC----CceEEecCCCCcCCCCC-C-
Q 043610          143 ATTQFAAVPLNLC-------TPN-DPVDYIVTGSWGDKAFKEAQK---------FC----NPQVIWSGKAEKYTKIP-N-  199 (430)
Q Consensus       143 aT~a~~~~~~sl~-------~~g-d~vl~~~~g~~~~~~~~~a~~---------~g----~~~~v~~~~~~~~g~~~-d-  199 (430)
                      |++|++.++.-..       .++ .+|+....++.|.-.......         ++    ....++...  ..+... + 
T Consensus       109 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~  186 (422)
T PRK05630        109 GSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPP--VRGSSPQEI  186 (422)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCc--ccCCChHHH
Confidence            9999997755321       123 467777766655321111100         00    111121110  001000 0 


Q ss_pred             ---ccccc--cCCCccEEEEeec-CCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEE
Q 043610          200 ---FDALE--QNPDAKYLHICAN-ETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVI  259 (430)
Q Consensus       200 ---~~~l~--i~~~~~lv~i~~~-~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~  259 (430)
                         .++++  +.+++..|++--. ....|+..|      ++.++ +++|+++++|+++. +|--  .+-.+.+    |++
T Consensus       187 ~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~  266 (422)
T PRK05630        187 SEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM  266 (422)
T ss_pred             HHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee
Confidence               12233  3345666655432 555688776      34554 58999999999974 4321  1111112    555


Q ss_pred             EeCCCccc-c--CCccEEEEEcHHHHhccCCC-CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610          260 YAGAQKNV-G--PSGVTIVIVRKDLLGNAQDK-TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM  335 (430)
Q Consensus       260 ~~s~~K~~-g--p~G~g~l~v~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~  335 (430)
                        +..|.+ |  +++ |.+.+++++.+..... ....+      ..+.++ +.|.....++.++|+.+.++    ...++
T Consensus       267 --t~gK~l~gG~~p~-~av~~~~~i~~~~~~~~~~~~~------~h~~T~-~g~Pla~aaa~aaL~~l~~~----~~~~~  332 (422)
T PRK05630        267 --CVGKALTGGFMSF-AATLCTDKVAQLISTPNGGGAL------MHGPTF-MANPLACAVAHASLEIIETG----MWRKQ  332 (422)
T ss_pred             --eeechhhcCcccc-ceeeccHHHHHHHhccCCCCcc------ccCCCC-cCCHHHHHHHHHHHHHHHhC----cHHHH
Confidence              668999 4  454 7778888887654210 00000      011232 45667778888899988642    34567


Q ss_pred             HHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610          336 NRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv  415 (430)
                      .+++.+++++.|.+......+. +-..++ .++.+.+.+......+.+.+.++|+++...   ...+|+.+....|++||
T Consensus       333 ~~~~g~~l~~~L~~l~~~~~v~-~vRg~G-l~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~---g~~l~~~PpL~it~~~i  407 (422)
T PRK05630        333 VKRIEAELIAGLSPLAHLPGVA-DVRVLG-AIGVVEMEQPVDMEEATQAAVDHGVWLRPF---GRLVYVMPPYITTSEQI  407 (422)
T ss_pred             HHHHHHHHHHHHHHhhcCCCee-eeeccc-cEEEEEECCcccHHHHHHHHHHCCeEEEec---CCEEEEECCccCCHHHH
Confidence            7777788887776421111111 111223 345566643211226888888999997542   13699999989999999


Q ss_pred             HHHHHHHHHHHHh
Q 043610          416 EKLVAFMKDFQAK  428 (430)
Q Consensus       416 ~~ll~~L~~~~~~  428 (430)
                      +++++.|++.++.
T Consensus       408 ~~~~~~l~~al~~  420 (422)
T PRK05630        408 AQICAALAAAVKA  420 (422)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999998764

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.06  E-value=1.7e-07  Score=95.78  Aligned_cols=199  Identities=10%  Similarity=0.034  Sum_probs=116.0

Q ss_pred             CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc----cccc--cccEEEeCCCccccCCcc
Q 043610          207 PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP----VDVT--RFGVIYAGAQKNVGPSGV  272 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~----idl~--~~d~~~~s~~K~~gp~G~  272 (430)
                      +++..|++--+....|++.+      +|.++ +++|+++++|++|+ +|.--    ++..  .-|+++.  .|.+ | ..
T Consensus       217 ~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~--gK~~-~-~~  292 (431)
T TIGR03251       217 HDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAF--GKKT-Q-VC  292 (431)
T ss_pred             CcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEe--cccC-c-cc
Confidence            56778888777788898876      35554 68999999999987 55431    1111  2367754  5655 3 33


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHccC
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGL-NEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~-~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      |++. .+++.+....    .+++..  ..+.+ ++.|.....++.++|+.+.+. ++ +.+.++-..+.+.|.+...+..
T Consensus       293 g~~~-~~~i~~~~~~----~~~~~~--~~~~T-~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~  363 (431)
T TIGR03251       293 GIMA-GRRVDEVADN----VFAVPS--RLNST-WGGNLVDMVRATRILEIIEEE-RLVDNARVQGAHLLARLHELAAEFP  363 (431)
T ss_pred             eEEe-cchHHHhhhh----cccCcc--ccCCC-CCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            5553 4332111100    000000  01122 245667788888999987643 33 4555555555555544333211


Q ss_pred             CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      ++  + .+...+. .++.+.+++.....++.+.|.++||++.+..  ...+|+++..+++++||++++++|.+
T Consensus       364 ~~--i-~~vrg~G-~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g--~~~lr~~P~l~~t~~eid~~l~~l~~  430 (431)
T TIGR03251       364 HL--V-SNPRGRG-LMCAFDLPSTADRDEVIRQLYREGVLLLGCG--ERSIRFRPPLTVTREEIDAAIDAIRR  430 (431)
T ss_pred             cc--e-ecccccc-eeEEEEeCCHHHHHHHHHHHHhCCeEEecCC--CCeEEEECCccCCHHHHHHHHHHHHh
Confidence            12  1 1111123 2445666542222368888999999986532  24699999999999999999999976

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PRK05965 hypothetical protein; Provisional

Probab=99.06  E-value=6.6e-08  Score=99.56  Aligned_cols=335  Identities=12%  Similarity=0.029  Sum_probs=181.9

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--.|+|.+++.+++.+...  .+.. .+...    +...++.+.|.+++..+-+ .++| ++
T Consensus        44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~--~~~~-~~~~~----~~~~~lae~L~~~~p~~~~-~v~f-~~  114 (459)
T PRK05965         44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPY--ATGY-FHFGS----EPAIRLAAKLAERAPGSLN-HVYF-TL  114 (459)
T ss_pred             CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCC--cccc-cccCC----HHHHHHHHHHHhhCCCCcC-EEEE-eC
Confidence            344455555543     22388999999999864210  0000 00111    2223555666666543323 5666 47


Q ss_pred             cHHHHHHHHHhhc--C----C-C-CCcEEEEeCChhHHHHHHHH--------HHhC----CceEEecCCCCcCCC--CCC
Q 043610          142 GATTQFAAVPLNL--C----T-P-NDPVDYIVTGSWGDKAFKEA--------QKFC----NPQVIWSGKAEKYTK--IPN  199 (430)
Q Consensus       142 gaT~a~~~~~~sl--~----~-~-gd~vl~~~~g~~~~~~~~~a--------~~~g----~~~~v~~~~~~~~g~--~~d  199 (430)
                      ||+||++.++.-.  .    + + ..+|+.+..+|.|.-.....        ..++    .+..++...  .+..  ..+
T Consensus       115 sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  192 (459)
T PRK05965        115 GGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPY--PYRNPVGDD  192 (459)
T ss_pred             ChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCc--ccccccCCC
Confidence            8999999876542  1    1 2 24577777666553211100        0111    111222111  0100  011


Q ss_pred             c--------cccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc
Q 043610          200 F--------DALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR  255 (430)
Q Consensus       200 ~--------~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~  255 (430)
                      .        ++++  +.    +++..|++--+....|++.|      ++.++ +++|+++|+|+++. ||-.  .+-.+.
T Consensus       193 ~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~  272 (459)
T PRK05965        193 PQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEA  272 (459)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhh
Confidence            1        2343  21    45666776656666788877      34554 59999999999976 5422  111222


Q ss_pred             ----ccEEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH
Q 043610          256 ----FGVIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGL  329 (430)
Q Consensus       256 ----~d~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~  329 (430)
                          -|+++.  .|.+|  ..=+|.+.+++++.+......+....+    ..+.++ +.|..+..++.++|+.+++    
T Consensus       273 ~gv~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~----~h~~T~-~gnpl~~Aaa~a~L~~l~~----  341 (459)
T PRK05965        273 EGVVPDLMTV--AKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPV----GHGYTY-SAHPVSAAVGLEVLRLYHE----  341 (459)
T ss_pred             cCCCCCeEEe--chhhccCCcceeEEEEcHHHHHHHhccccccccc----cccCCC-CCCHHHHHHHHHHHHHHHh----
Confidence                266554  68883  212788888999876543210000000    011232 3456677778888998864    


Q ss_pred             HHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc-ceEEEEcCC-C----------chhHHHHHHHHHcCCeecCCCC
Q 043610          330 NEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF-MNVPFTLEK-S----------DLEAEFVKEAAKEKMVQLKGHR  397 (430)
Q Consensus       330 ~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~-~iv~f~~~~-~----------~~~~~~~~~L~~~Gi~~~~g~~  397 (430)
                      +.+.++.+++.+++.+.|++...+..+   ...|.. ..+.+.+.. .          .....+...+.++|+++.+.. 
T Consensus       342 ~~l~~~~~~~g~~l~~~l~~l~~~~~v---~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-  417 (459)
T PRK05965        342 GGLLANGQKAGPRFAAGLDALRAHPLV---GDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFG-  417 (459)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhccCCCE---EEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-
Confidence            346677778888888888763211111   112222 223344421 0          011247777888999985421 


Q ss_pred             CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          398 SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       398 ~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       ...||+.+....+++||+++++.|.+.+++
T Consensus       418 -~~~i~~~PpL~it~~ei~~~~~~l~~~l~~  447 (459)
T PRK05965        418 -DGVLGFAPALCCTEGEFDLIFERTRKTLDD  447 (459)
T ss_pred             -CcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence             235999998889999999999999988754

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.06  E-value=8.1e-08  Score=95.27  Aligned_cols=328  Identities=14%  Similarity=0.075  Sum_probs=179.8

Q ss_pred             cCCCCCceeecCCCCC-----CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 043610           65 SGQEDRVFNFAAGPAN-----LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFL  139 (430)
Q Consensus        65 ~~~~~~~~l~~~gp~~-----~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~  139 (430)
                      -.+.++.+.+..+-+|     -+|.|.+++++.+.+    |.+     . +... +..-++.+.+.+.+..-+  .|-|+
T Consensus        49 DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~----G~~-----f-g~Pt-e~Ei~~Aell~~~~p~~e--~vrfv  115 (432)
T COG0001          49 DVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER----GLS-----F-GAPT-ELEVELAELLIERVPSIE--KVRFV  115 (432)
T ss_pred             eCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh----cCC-----C-CCCC-HHHHHHHHHHHHhcCccc--EEEEe
Confidence            3445555555553333     377899999999875    221     1 1111 112244467777776632  67776


Q ss_pred             eCcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHH-HHHHHHH-hCCceE-EecCC--C---CcCC---CCCCccccc--
Q 043610          140 QGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDK-AFKEAQK-FCNPQV-IWSGK--A---EKYT---KIPNFDALE--  204 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~-~~~~a~~-~g~~~~-v~~~~--~---~~~g---~~~d~~~l~--  204 (430)
                       +|||||...++.-.  ....|+|+.++.+|.|+. +. ..+. .|.... .+...  +   .+..   .--|++.++  
T Consensus       116 -nSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~-lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~  193 (432)
T COG0001         116 -NSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSL-LVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEA  193 (432)
T ss_pred             -cchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHH-HhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHH
Confidence             78999988765432  244678887776666542 21 1111 121000 01000  0   0000   001334444  


Q ss_pred             ---cCCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCCcc-cccc-ccE--EEeCCCcccc--
Q 043610          205 ---QNPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSKPV-DVTR-FGV--IYAGAQKNVG--  268 (430)
Q Consensus       205 ---i~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~~i-dl~~-~d~--~~~s~~K~~g--  268 (430)
                         ..++...|++--+-..-|++.|      .+.++ +++|+++|.|++...--.+. -..+ +++  =..+..|.+|  
T Consensus       194 ~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlGKiIGGG  273 (432)
T COG0001         194 FEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLGKIIGGG  273 (432)
T ss_pred             HHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhhhhhcCC
Confidence               2346777777666777789888      24554 59999999999865211110 0011 111  2356779993  


Q ss_pred             CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          269 PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       269 p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      .| +|.+-.+.++++...+.-+.|..       +..  .-|...+.+..++|+.+.+..+   +.++..++.++|++.|+
T Consensus       274 lP-~ga~gGr~eiM~~~~p~g~vyqa-------GT~--sgnplamaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~  340 (432)
T COG0001         274 LP-IGAFGGRAEIMEQLAPLGPVYQA-------GTL--SGNPLAMAAGLATLEELMTEEG---VYERLDALGERLAEGLR  340 (432)
T ss_pred             cc-eeeeccHHHHHhhhCCCCCcccc-------CCC--CCcHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHH
Confidence            33 67777899998876554443321       111  2355677777888888775333   55555555666665555


Q ss_pred             cc---CCceecCCCCCCCccceEEEEcCCC-----------chhH--HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCH
Q 043610          349 GS---NGFYKCPVEKSVRSFMNVPFTLEKS-----------DLEA--EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL  412 (430)
Q Consensus       349 ~~---~G~~~~~~~~~~rs~~iv~f~~~~~-----------~~~~--~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~  412 (430)
                      +.   .|+.+.. .   +....+.+.+.+.           +.+.  ++...|.++||+..+++-.  ..=+|.  .+++
T Consensus       341 ~~~~~~g~~~~v-~---~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~e--a~flS~--ahte  412 (432)
T COG0001         341 AAAERHGIPLTV-N---RVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFE--AGFLST--AHTE  412 (432)
T ss_pred             HHHHHhCCCeEE-e---eecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCcccc--ceeeec--ccCH
Confidence            42   4555432 1   1122344333221           1111  3555777889998875411  122333  5699


Q ss_pred             HHHHHHHHHHHHHHHh
Q 043610          413 AGVEKLVAFMKDFQAK  428 (430)
Q Consensus       413 edv~~ll~~L~~~~~~  428 (430)
                      +||++.++++++++++
T Consensus       413 ~di~~~~~a~~~~~~~  428 (432)
T COG0001         413 EDIDRTLEAADEAFKE  428 (432)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999988765

>PRK07678 aminotransferase; Validated

Probab=99.05  E-value=1.4e-07  Score=97.06  Aligned_cols=334  Identities=11%  Similarity=0.015  Sum_probs=179.8

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.++.+.+..|-     +--+|.|.+++.+.+.+....+     .....    +...++.+.|.++++.. + .++| ++
T Consensus        45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-----~~~~~----~~~~~lae~l~~~~~~~-~-~v~f-~~  112 (451)
T PRK07678         45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFP-----LTQSH----EPAIKLAEKLNEWLGGE-Y-VIFF-SN  112 (451)
T ss_pred             CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccc-----cccCC----HHHHHHHHHHHHhCCCC-C-EEEE-eC
Confidence            344444554443     3347899999999886421111     01111    22335666667776543 2 6666 47


Q ss_pred             cHHHHHHHHHhhc--C-----CCC-CcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCC--CcCCCC-
Q 043610          142 GATTQFAAVPLNL--C-----TPN-DPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKA--EKYTKI-  197 (430)
Q Consensus       142 gaT~a~~~~~~sl--~-----~~g-d~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~--~~~g~~-  197 (430)
                      ||++|++.++.-.  .     ++| .+|+.+..+|.|.-..-.. ..+             .+..++....  ..++.. 
T Consensus       113 sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (451)
T PRK07678        113 SGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALA-ATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESE  191 (451)
T ss_pred             CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhh-cCCCcccccccCCCCCCCEEeCCCccccccccCCh
Confidence            8999999775542  1     123 4566666666553211111 011             1111211100  000000 


Q ss_pred             --CCc---cccc--c----CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCC--cccccc-
Q 043610          198 --PNF---DALE--Q----NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSK--PVDVTR-  255 (430)
Q Consensus       198 --~d~---~~l~--i----~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~--~idl~~-  255 (430)
                        .+.   +.++  +    .+++..|++--+....|++.|      ++.++ +++|+++|+|+++ +||-.  .+-.+. 
T Consensus       192 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~  271 (451)
T PRK07678        192 DIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNY  271 (451)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhc
Confidence              011   1122  2    235666666555566688877      34454 5899999999998 46531  111222 


Q ss_pred             ---ccEEEeCCCcccc---CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH
Q 043610          256 ---FGVIYAGAQKNVG---PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGL  329 (430)
Q Consensus       256 ---~d~~~~s~~K~~g---p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~  329 (430)
                         -|+++.  .|.+|   .| +|.+.+++++.+...+....    .. ...+.++ +.|....+++.++|+.++++   
T Consensus       272 gv~PDivt~--gK~lggG~~P-i~av~~~~~i~~~~~~~~~~----~~-~~h~~T~-~gnp~~~aaa~a~l~~l~~~---  339 (451)
T PRK07678        272 GVKPDIITM--AKGITSAYLP-LSATAVKKEIYEAFKGKGEY----EH-FRHVNTF-GGNPAACALALKNLEIMENE---  339 (451)
T ss_pred             CCCCCEEEe--ecccccCCcc-eeEEEEcHHHHHHHhccCcc----cc-cccCCCC-CcCHHHHHHHHHHHHHHHhC---
Confidence               266644  89883   22 78888899987654321100    00 0011232 34566778888899988642   


Q ss_pred             HHHHHHHHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcCC-C--------chhHHHHHHHHHcCCeecCCCC--
Q 043610          330 NEVEKMNRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEK-S--------DLEAEFVKEAAKEKMVQLKGHR--  397 (430)
Q Consensus       330 ~~v~~~~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~-~--------~~~~~~~~~L~~~Gi~~~~g~~--  397 (430)
                       .+.++.+++.+++++.|.+.. ....+ .+-..+.. ++.+.+.+ .        ....++...|.++|+++.+...  
T Consensus       340 -~~~~~~~~~g~~l~~~l~~~~~~~~~v-~~vrg~Gl-~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v  416 (451)
T PRK07678        340 -NLIERSAQLGELLLEQLKEELGEHPLV-GDIRGKGL-LVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTV  416 (451)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHhcCCCE-EEEEeece-EEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccc
Confidence             356666677777777665421 11111 01111222 23344421 0        1112577788889999754211  


Q ss_pred             --CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          398 --SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       398 --~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                        ....+|+++...+|++||++++++|++.+++
T Consensus       417 ~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~  449 (451)
T PRK07678        417 AGYNNVLTLSPPLVISSEEIAFIVGTLKTALER  449 (451)
T ss_pred             cCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence              1246999999999999999999999998865

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.05  E-value=2.6e-08  Score=98.07  Aligned_cols=200  Identities=12%  Similarity=0.086  Sum_probs=127.8

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HH-HHHHHHhC-CceEEecCCCCcC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KA-FKEAQKFC-NPQVIWSGKAEKY  194 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~-~~~a~~~g-~~~~v~~~~~~~~  194 (430)
                      ..+++.++++-|++   +++++ +||..|+..++..++.+|++++.....|-+. +. .+...++| +...+..      
T Consensus        80 ~~le~~iaal~ga~---~~l~f-sSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~------  149 (409)
T KOG0053|consen   80 DVLESGIAALEGAA---HALLF-SSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV------  149 (409)
T ss_pred             HHHHHHHHHHhCCc---eEEEe-cccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech------
Confidence            35668888888987   45665 6789999999999999999998776444332 22 22334556 5544432      


Q ss_pred             CCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC--CCccccccccEEEeCCCccc
Q 043610          195 TKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC--SKPVDVTRFGVIYAGAQKNV  267 (430)
Q Consensus       195 g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G--~~~idl~~~d~~~~s~~K~~  267 (430)
                         -+++.++  +.+++++|++=.+.||+..+.|  +|.++ +++|+++|||.+-+-+  ..|+.+. .|+++.|..||+
T Consensus       150 ---~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lG-ADIV~hSaTKyi  225 (409)
T KOG0053|consen  150 ---DDLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQDPLPLG-ADIVVHSATKYI  225 (409)
T ss_pred             ---hhHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccccChhhcC-CCEEEEeeeeee
Confidence               2234444  6789999999999999999999  78886 7999999999985533  2233332 489999999999


Q ss_pred             cCCc---cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610          268 GPSG---VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       268 gp~G---~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l  343 (430)
                      |-..   .|.++.+ +++..++..       ..     .....+++....+.+...|+-      +.-+.+++.+.+..+
T Consensus       226 ~Ghsdvi~G~iv~n~~~~~~~l~~-------~~-----~~lg~~~~p~~~~ll~Rglkt------l~lRi~~~~ena~~~  287 (409)
T KOG0053|consen  226 GGHSDVIGGSVVLNSEELASRLKF-------LQ-----EDLGWCEDPFDLFLLSRGLKT------LHLRINKHSENALKI  287 (409)
T ss_pred             cCCcceeeeEEecCcHHHHHHHHH-------HH-----HHhcCCCCHHHHHHHhcCcch------hhhhHHHHHHHHHHH
Confidence            5333   4666665 666554311       10     112345666554444433332      223344444554556


Q ss_pred             HHHHHc
Q 043610          344 YNVIDG  349 (430)
Q Consensus       344 ~~~l~~  349 (430)
                      .+.|.+
T Consensus       288 A~~Le~  293 (409)
T KOG0053|consen  288 ALLLEA  293 (409)
T ss_pred             HHHhhh
Confidence            666655

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.05  E-value=1e-08  Score=99.14  Aligned_cols=317  Identities=15%  Similarity=0.155  Sum_probs=180.5

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-----CCcEEEEEeCcHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-----QEYSVLFLQGGATT  145 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-----~~~~vv~~~~gaT~  145 (430)
                      +|-+-.|-.|+-+.|.++-..-+.......   |-.-...+.|.+   ++.   +-+||.+     .+.-+-+-+-|||.
T Consensus        35 vY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~---Yl~i~G~~~f~~---~~~---~llFG~d~~~l~~~Rv~t~Qt~GGTG  105 (396)
T COG1448          35 VYKDEDGKTPVLRAVKKAEKRLLEQEKTKN---YLPIEGLPEFLE---AVQ---KLLFGADSPALAEDRVATVQTLGGTG  105 (396)
T ss_pred             eeeCCCCCcchhHHHHHHHHHhhccccccc---cCCcCCcHHHHH---HHH---HHhcCCCcHHHHhhhHhheecCCcch
Confidence            455556778888888888554443221111   111112233432   222   2356743     11012223457899


Q ss_pred             HHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c--CCCccEEEE-eec
Q 043610          146 QFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q--NPDAKYLHI-CAN  217 (430)
Q Consensus       146 a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~~lv~i-~~~  217 (430)
                      |+.....-+  ..|...|. +.+..|+..- .+....| ++...+.-+.  .+..+|.+.+-  +  -+...+|.+ ...
T Consensus       106 AL~~~A~fl~~~~~~~~vw-is~PtW~NH~-~If~~aGl~v~~Y~Yyd~--~~~~~df~~mla~L~~a~~~~vvLLH~Cc  181 (396)
T COG1448         106 ALRVAADFLARFFPDATVW-ISDPTWPNHK-AIFEAAGLEVETYPYYDA--ETKGLDFDGMLADLKTAPEGSVVLLHGCC  181 (396)
T ss_pred             HHHHHHHHHHHhCCCceEE-eCCCCcHhHH-HHHHhcCCceeeeecccc--ccccccHHHHHHHHHhCCCCCEEEEecCC
Confidence            988765444  24444454 4555566432 2455678 8877775332  22346776542  2  233333333 224


Q ss_pred             CCCccccCC-----CCccc-cCCCcEEEEecc-CcCCCCccccccc--------c---EEEeCCCccccCCc--cEEEEE
Q 043610          218 ETIHGVEFK-----EYPSA-KNSTGILVADMS-SNFCSKPVDVTRF--------G---VIYAGAQKNVGPSG--VTIVIV  277 (430)
Q Consensus       218 ~t~tG~~~p-----ei~~~-~~~g~~lvvD~a-~s~G~~~idl~~~--------d---~~~~s~~K~~gp~G--~g~l~v  277 (430)
                      +||||.-..     +|.++ ++++.+-++|-+ |.|+.- ++-+.+        .   ++..|++|.+|..|  +|.+.+
T Consensus       182 HNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~v  260 (396)
T COG1448         182 HNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSV  260 (396)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEE
Confidence            899999988     35664 789999999965 888764 332211        1   67899999999888  666543


Q ss_pred             -c--HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH--HHHH--hcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          278 -R--KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE--YLLE--LGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       278 -~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~--~l~~--~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                       .  .+..+++....+..        -+..+..||..+...+...|.  .+..  +..++.+++|+.+++..+.+.|++.
T Consensus       261 va~~~~~a~~v~sqlk~~--------iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~  332 (396)
T COG1448         261 VAEDAEEADRVLSQLKAI--------IRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKAL  332 (396)
T ss_pred             EeCCHHHHHHHHHHHHHH--------HHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence             3  23333321111100        122446777777776666652  1211  1247889999999999999999972


Q ss_pred             C---CceecCCCCCCCccceEEEEcCCCchhHHHHHHHH-HcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          351 N---GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       351 ~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .   .|..+.   .++  +.++  ..  +++++-+.+|+ +.||+...+    |  ||++.+ .++..|+.+.++|.++
T Consensus       333 ~~~~~f~~i~---~Q~--GMFs--y~--Gls~~QV~rLree~~IY~v~s----G--Ri~vaG-l~~~ni~~va~ai~~v  395 (396)
T COG1448         333 GAPRNFDFII---SQR--GMFS--YT--GLSPEQVDRLREEFGIYLVAS----G--RINVAG-LNTSNIDYVAKAIAAV  395 (396)
T ss_pred             CCCcccchHh---hcC--ceee--cC--CCCHHHHHHHHHhccEEEecC----C--eeeecc-CChhhHHHHHHHHHhh
Confidence            1   133332   122  2344  33  46666666775 469987642    1  799875 5688899999998765

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.03  E-value=3.2e-08  Score=100.90  Aligned_cols=318  Identities=7%  Similarity=-0.024  Sum_probs=174.8

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-----
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-----  155 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-----  155 (430)
                      -+|.|.+++.+++.+......    .....    +...++.+.|++++..+-+ .++| ++||+||++.++.-..     
T Consensus        60 ~~p~i~~Ai~~q~~~~~~~~~----~~~~~----~~~~~la~~L~~~~p~~~~-~v~f-~~SGsEAve~AlklAr~~~~~  129 (428)
T PRK07986         60 NHPQLNAAMKSQIDAMSHVMF----GGITH----PPAIELCRKLVAMTPQPLE-CVFL-ADSGSVAVEVAMKMALQYWQA  129 (428)
T ss_pred             CCHHHHHHHHHHHhhcCCccc----cccCC----HHHHHHHHHHHhhCCCCcC-EEEE-eCCcHHHHHHHHHHHHHHHHh
Confidence            468999999998865221100    00011    2234555666666643323 6666 5789999997755321     


Q ss_pred             --CCCCcEEEEeCChhHHHHHHHH---------HHhC----CceEEecCCCCcCCC---CCCccccc--cC---CCccEE
Q 043610          156 --TPNDPVDYIVTGSWGDKAFKEA---------QKFC----NPQVIWSGKAEKYTK---IPNFDALE--QN---PDAKYL  212 (430)
Q Consensus       156 --~~gd~vl~~~~g~~~~~~~~~a---------~~~g----~~~~v~~~~~~~~g~---~~d~~~l~--i~---~~~~lv  212 (430)
                        ....+|+.+..++.|.-.....         +.++    .+..++.... .+..   .-|+++++  +.   +++.+|
T Consensus       130 ~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~d~~~l~~~l~~~~~~iaav  208 (428)
T PRK07986        130 KGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQS-RFDGEWDERDIAPFARLMAAHRHEIAAV  208 (428)
T ss_pred             cCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCc-ccchhhHHHHHHHHHHHHHhCCCcEEEE
Confidence              1235677777666553211000         0010    1111211100 0100   01223444  32   345555


Q ss_pred             EEeec-CCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc----ccEEEeCCCcccc---CCccEE
Q 043610          213 HICAN-ETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR----FGVIYAGAQKNVG---PSGVTI  274 (430)
Q Consensus       213 ~i~~~-~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~----~d~~~~s~~K~~g---p~G~g~  274 (430)
                      ++--. ....|++.+      +|.++ +++|+++++|++|. +|-.  .+-.+.    -|+++  ..|.+|   .+ +|.
T Consensus       209 i~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG~~p-~~a  285 (428)
T PRK07986        209 ILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILC--LGKALTGGTMT-LSA  285 (428)
T ss_pred             EEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEE--echhhhCCccc-Ccc
Confidence            55332 455677665      34554 58999999999974 3321  111111    25664  789883   23 466


Q ss_pred             EEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCce
Q 043610          275 VIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY  354 (430)
Q Consensus       275 l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~  354 (430)
                      +.+++++.+.........+      ..+.++ +.|..+.+++.++|+.+.+.    .+.++.+++.+++++.|.+.....
T Consensus       286 v~~~~~i~~~~~~~~~~~~------~~~~T~-~g~p~~~aaa~a~L~~i~~~----~~~~~~~~~g~~l~~~l~~l~~~~  354 (428)
T PRK07986        286 TLTTREVAETISNGEAGCF------MHGPTF-MGNPLACAVANASLSLLESG----DWQQQVAAIEAQLREELAPLRDAP  354 (428)
T ss_pred             hhchHHHHHHhhcCCCCcc------ccCCCC-CcCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHhcCC
Confidence            6778888765432110000      011232 35667788888889987642    457777888888888887632222


Q ss_pred             ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          355 KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+. +-..++ .+..+.+.+......+.+.|.++|+++.+..   ..+|+.+-...|++|++++++.|.+.++.
T Consensus       355 ~i~-~vRg~G-l~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~g---~~i~~~Ppl~it~~ei~~~~~~l~~~l~~  423 (428)
T PRK07986        355 MVA-DVRVLG-AIGVVETTRPVNMAALQRFFVEQGVWIRPFG---KLIYLMPPYIILPEQLQRLTAAVNRAVQD  423 (428)
T ss_pred             CEE-eEeccc-eEEEEEeCCcccHHHHHHHHHHCCcEEEecC---CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence            111 111123 2445555432212268888999999986421   36999999889999999999999998764

>PRK07482 hypothetical protein; Provisional

Probab=99.03  E-value=2.1e-07  Score=95.96  Aligned_cols=339  Identities=11%  Similarity=-0.034  Sum_probs=178.7

Q ss_pred             CCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-.     --+|+|.+++.+++.+...  ...+ .....    +...++.+.|.+++..+-+ .++|. +
T Consensus        48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~--~~~~-~~~~~----~~~~~lAe~L~~~~p~~~~-~v~f~-~  118 (461)
T PRK07482         48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAY--YHTY-VGHGT----EASITLSKRIIDRAPAGMS-KVYYG-L  118 (461)
T ss_pred             CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCc--cccc-cccCC----HHHHHHHHHHHHhCCCCcC-EEEEe-C
Confidence            4455555655542     3478999999998865210  0000 00111    2333555666666543222 66664 7


Q ss_pred             cHHHHHHHHHhhcC------C-C-CCcEEEEeCChhHHHHHHHH--------HHhC----CceEEecCCC-C--cCCCC-
Q 043610          142 GATTQFAAVPLNLC------T-P-NDPVDYIVTGSWGDKAFKEA--------QKFC----NPQVIWSGKA-E--KYTKI-  197 (430)
Q Consensus       142 gaT~a~~~~~~sl~------~-~-gd~vl~~~~g~~~~~~~~~a--------~~~g----~~~~v~~~~~-~--~~g~~-  197 (430)
                      ||+||++.++.-..      + + ..+|+.+..+|.|.-.....        ..++    .+..++.... .  .++.. 
T Consensus       119 sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  198 (461)
T PRK07482        119 SGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSE  198 (461)
T ss_pred             chHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCH
Confidence            89999997765431      1 2 34566666666553110000        0111    1111111100 0  00000 


Q ss_pred             -----CCccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc-
Q 043610          198 -----PNFDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR-  255 (430)
Q Consensus       198 -----~d~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~-  255 (430)
                           .++++++  +.    +++..|++--+....|++.+      ++.++ +++|+++|+|+++. ||-.  .+-.+. 
T Consensus       199 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~  278 (461)
T PRK07482        199 EQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHY  278 (461)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhc
Confidence                 0123344  31    34666666555566688866      35554 59999999999976 5421  111111 


Q ss_pred             ---ccEEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610          256 ---FGVIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN  330 (430)
Q Consensus       256 ---~d~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~  330 (430)
                         -|+++.  .|.+|  ..-+|.+++++++.+.+....+.    ......+.+ ++-|..+..++.++|+.+.+.    
T Consensus       279 gv~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~----~~~~~h~~T-~~gnpl~~Aaa~a~L~~~~~~----  347 (461)
T PRK07482        279 GIEPDLITV--AKGLTSAYAPLSGSIVGEKVWDVLEQGSDE----HGAIGHGWT-YSGHPICAAAALANLDILERE----  347 (461)
T ss_pred             CCCCCEEEE--ccccccCccccceeeecHHHHHHHhccccc----CCccccCCC-CCcCHHHHHHHHHHHHHHHhC----
Confidence               266664  79883  22367788888876654211000    000001122 245667788888899988743    


Q ss_pred             HHHHHHHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcCC-Cc----------hhHHHHHHHHHcCCeecCCCCC
Q 043610          331 EVEKMNRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEK-SD----------LEAEFVKEAAKEKMVQLKGHRS  398 (430)
Q Consensus       331 ~v~~~~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~-~~----------~~~~~~~~L~~~Gi~~~~g~~~  398 (430)
                      .+.++.+++.+++++.|.+.. ...++. +-..+. ..+.+.+.+ ..          ....+...+.++|+++..... 
T Consensus       348 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~-~vrG~G-lm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~-  424 (461)
T PRK07482        348 NLVGNAAEVGAYFRARLRAAFGDHPLVG-EVRGVG-MLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPH-  424 (461)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCEE-EEeece-eEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCC-
Confidence            355556666666666665421 111110 111122 223344421 10          112577788889998743211 


Q ss_pred             CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          399 VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       399 ~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...+|+.+...+|++||+++++.|++.+++
T Consensus       425 ~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~  454 (461)
T PRK07482        425 GDILGFAPPLVLTRAEADEIVAIAKDAVDE  454 (461)
T ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            246999988889999999999999988753

>PRK07046 aminotransferase; Validated

Probab=99.02  E-value=2e-07  Score=95.71  Aligned_cols=324  Identities=13%  Similarity=0.013  Sum_probs=173.3

Q ss_pred             CCCCceeecCCCCC-----CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPAN-----LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~~-----~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.++.+.+..|-++     -+|.|.+++++.+.+-    ..   .....    +...++.+.|.++++.  + .+.|. +
T Consensus        73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~----~~---~~~~~----~~~~~lAe~l~~~~~~--~-~v~F~-n  137 (453)
T PRK07046         73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRG----LT---TMLPS----EDAAWVGEELARRFGL--P-YWQVA-T  137 (453)
T ss_pred             CCCEEEEecccccccccCCCCHHHHHHHHHHHHhC----CC---CCCCC----HHHHHHHHHHHHHhCC--C-EEEEE-C
Confidence            34445555544322     3689999999988641    11   01111    2233555666666643  3 67775 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHH-HHHHHHHhCCceEEec--------CCC---CcCCCCCCccccc--c
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDK-AFKEAQKFCNPQVIWS--------GKA---EKYTKIPNFDALE--Q  205 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~-~~~~a~~~g~~~~v~~--------~~~---~~~g~~~d~~~l~--i  205 (430)
                      |||||++.++.-.  ....++|+.+..+|.|.. +.......+.....+.        ..+   .+|   .|+++++  +
T Consensus       138 SGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---nd~~~l~~~l  214 (453)
T PRK07046        138 TATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF---NDLAALEAAL  214 (453)
T ss_pred             CHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC---CCHHHHHHHh
Confidence            8999999776543  233456776766665531 1111101111100000        000   011   1345555  3


Q ss_pred             -CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc----CCCCc--cccccccEEEeCCCcccc--C
Q 043610          206 -NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN----FCSKP--VDVTRFGVIYAGAQKNVG--P  269 (430)
Q Consensus       206 -~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s----~G~~~--idl~~~d~~~~s~~K~~g--p  269 (430)
                       .+++.+|++--.....|.+.|      ++.++ +++|+++|+|++++    +|...  .++. -|+++  ..|.+|  .
T Consensus       215 ~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~-PDi~t--~gK~lggG~  291 (453)
T PRK07046        215 ADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLE-PDFLV--VGKPIAGGV  291 (453)
T ss_pred             CCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCC-cccee--ehhhhcCCC
Confidence             245666666545555677766      24444 58999999999985    44321  1221 26654  589993  3


Q ss_pred             CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          270 SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       270 ~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      + +|.+..++++.+...+.......  .......++ ..|...+.+..++|+.+.+.    +..++.+++.++++++|.+
T Consensus       292 P-i~av~g~~~i~~~~~~~~~~~~~--~~~~~~~T~-~gnpl~~aa~~a~L~~l~~~----~~~~~~~~~g~~l~~~L~~  363 (453)
T PRK07046        292 P-CAVYGFSAELAERAQAAKASAPP--GHSGIGTTL-SANALAMAAMRATLAEVMTE----AAYAHMLALAARLAAGLRA  363 (453)
T ss_pred             c-ceeeeehHHHHHHHhhccccCCC--CCceeCCCC-cccHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHHH
Confidence            3 78888899987765321100000  000001122 34666788888889877642    3455666666666666654


Q ss_pred             c---CCceecCCCCCCCccceEEEEcCC-C-------------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCH
Q 043610          350 S---NGFYKCPVEKSVRSFMNVPFTLEK-S-------------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL  412 (430)
Q Consensus       350 ~---~G~~~~~~~~~~rs~~iv~f~~~~-~-------------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~  412 (430)
                      .   .++.... .  .... .+.+.+.+ .             .....+...+.++||.+.+..   +.+|+++.  +++
T Consensus       364 l~~~~~~~~~v-~--g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~---~~~~~~p~--~t~  434 (453)
T PRK07046        364 VIARHGLPWHV-T--RVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPFH---NMMLVCPA--TTA  434 (453)
T ss_pred             HHHhCCCCeEE-E--EeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEeccc---CcEEEeCC--CCH
Confidence            1   2322110 0  0111 22333211 0             011235666778899986521   35788874  799


Q ss_pred             HHHHHHHHHHHHHHHh
Q 043610          413 AGVEKLVAFMKDFQAK  428 (430)
Q Consensus       413 edv~~ll~~L~~~~~~  428 (430)
                      +||+++++++++.++.
T Consensus       435 ~did~~~~~~~~~l~~  450 (453)
T PRK07046        435 ADVDRLVAAFDACLGE  450 (453)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998865

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.99  E-value=1.1e-07  Score=97.21  Aligned_cols=317  Identities=10%  Similarity=-0.002  Sum_probs=175.0

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC----
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC----  155 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~----  155 (430)
                      --+|.|.+++.+++.+......    .....+    ...++.+.|.+++..+-+ .++|+ .+|++|++.++.-..    
T Consensus        61 h~~p~v~~ai~~~~~~~~~~~~----~~~~~~----~~~~la~~l~~~~~~~~~-~v~f~-~sGseA~e~AlklAr~~~~  130 (427)
T TIGR00508        61 YNHPRLNAAAQKQIDKMSHVMF----GGFTHK----PAIELCQKLVKMTPNALD-CVFLA-DSGSVAVEVALKMALQYWQ  130 (427)
T ss_pred             CCCHHHHHHHHHHHHhcCCccc----cccCCH----HHHHHHHHHHhhCCCCCC-EEEEe-CCcHHHHHHHHHHHHHHHH
Confidence            4578999999998864211000    001112    233555666666654323 67665 789999987765421    


Q ss_pred             ---CCC-CcEEEEeCChhHHHHHHHHHHhC-C-------------ceEEecCCCCcCCCC---CCccccc--c---CCCc
Q 043610          156 ---TPN-DPVDYIVTGSWGDKAFKEAQKFC-N-------------PQVIWSGKAEKYTKI---PNFDALE--Q---NPDA  209 (430)
Q Consensus       156 ---~~g-d~vl~~~~g~~~~~~~~~a~~~g-~-------------~~~v~~~~~~~~g~~---~d~~~l~--i---~~~~  209 (430)
                         .+| .+|+.+..++.|....-.. ..+ .             ...++.... .+...   -++++++  +   .+++
T Consensus       131 ~~~~~~r~~il~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~l~~~l~~~~~~v  208 (427)
T TIGR00508       131 AKGEKNRQKFLTIRSGYHGDTFGAMS-VCDPENSMHSLYKGYLPEQIFAPAPQN-RFDEEWNEEAITPLAKLMELHSDEI  208 (427)
T ss_pred             hhCCCCccEEEEEcCCcCCccHhhhc-ccCCcccccccccccCCCCeEcCCCCc-cccchhHHHHHHHHHHHHHhcCCcE
Confidence               123 4677777666653211111 011 1             111111000 01000   0223333  2   2345


Q ss_pred             cEEEEeec-CCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------ccccccccEEEeCCCcccc--CCc
Q 043610          210 KYLHICAN-ETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTRFGVIYAGAQKNVG--PSG  271 (430)
Q Consensus       210 ~lv~i~~~-~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~~d~~~~s~~K~~g--p~G  271 (430)
                      .+|++--+ ....|...+      ++.++ +++|+++++|++|. +|--       ..++ .-|+++  ..|.++  ..-
T Consensus       209 aavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~--~gK~l~gG~~p  285 (427)
T TIGR00508       209 AAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILC--VGKALTGGYMT  285 (427)
T ss_pred             EEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEE--echhhhcCccc
Confidence            55555443 455567665      34444 58999999999973 3321       1122 126555  689983  212


Q ss_pred             cEEEEEcHHHHhccCCCC-CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          272 VTIVIVRKDLLGNAQDKT-PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                      ++.+..++++.+.+.... ..+.       ...++ ..|..+..++.++|+.+.+.    ...++.+++.++++++|++ 
T Consensus       286 ~~a~~~~~~~~~~~~~~~~~~~~-------~~~T~-~g~p~~~aaa~a~l~~l~~~----~~~~~~~~~~~~l~~~L~~-  352 (427)
T TIGR00508       286 LSATVTTDKVAQTISSGEAGCFM-------HGPTF-MGNPLACAVAEASLAILLEG----EWQKQVSAIENQLKRELSP-  352 (427)
T ss_pred             ceEEEEcHHHHHHHhcCCCCccc-------cCCCC-CcCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHH-
Confidence            467777888866543211 0000       01122 24667788888899977642    3467888888888888876 


Q ss_pred             CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          351 NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       351 ~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+......+-..++. ++.+.+.+.....++.++|.++||.+.+..   ..+|+++...+|++||++++++|++.++.
T Consensus       353 l~~~~~i~~vrg~G~-~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~~---~~l~~~ppl~~t~~~id~~~~~l~~~l~~  426 (427)
T TIGR00508       353 LRKNPVVKDVRVLGA-IGVVEMYKPVNVEELQKKFVEQGVWIRPFG---KLIYVMPPYIITTEQLQKLTAALIEALHE  426 (427)
T ss_pred             hhcCCCEEeEecccc-EEEEEECCccCHHHHHHHHHHCCeEEEecC---CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence            332111001111233 455665432222368888999999986421   26999999889999999999999998764

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK06105 aminotransferase; Provisional

Probab=98.99  E-value=1e-07  Score=98.13  Aligned_cols=336  Identities=11%  Similarity=0.058  Sum_probs=179.9

Q ss_pred             CCCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           66 GQEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        66 ~~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      ...++.+.+..|-     +--+|.|.+++.+++.+...  .+.  .+...   .+...++.+.|.+++..+-+ .++| +
T Consensus        45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~--~~~--~~~~~---~~~~~~lae~L~~~~p~~~~-~v~f-~  115 (460)
T PRK06105         45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPF--YHT--FSHKS---HGPVIDLAEKLVAMAPVPMS-KVFF-T  115 (460)
T ss_pred             CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCC--eec--ccccC---CHHHHHHHHHHHHhCCCCCC-EEEE-e
Confidence            3344455555542     33478999999999865210  000  00001   12334566777777654333 5666 5


Q ss_pred             CcHHHHHHHHHhhcC------C-CC-CcEEEEeCChhHHHHHHHH--------HHhC----CceEEecCCCCcC---CCC
Q 043610          141 GGATTQFAAVPLNLC------T-PN-DPVDYIVTGSWGDKAFKEA--------QKFC----NPQVIWSGKAEKY---TKI  197 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~------~-~g-d~vl~~~~g~~~~~~~~~a--------~~~g----~~~~v~~~~~~~~---g~~  197 (430)
                      +||++|+++++.-..      + +| .+|+.+..++.|.-.....        +.++    .+..++......+   +..
T Consensus       116 ~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  195 (460)
T PRK06105        116 NSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGES  195 (460)
T ss_pred             CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCC
Confidence            789999998766521      1 23 4566666665553210000        0011    0111111000000   000


Q ss_pred             ------CCccccc--c---C-CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCCc--ccccc
Q 043610          198 ------PNFDALE--Q---N-PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSKP--VDVTR  255 (430)
Q Consensus       198 ------~d~~~l~--i---~-~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~~--idl~~  255 (430)
                            ...++++  +   . +++..|++=-.....|++.+      ++.++ +++|+++++|++| ++|-.-  +-.+.
T Consensus       196 ~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~  275 (460)
T PRK06105        196 EEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCET  275 (460)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHh
Confidence                  0012333  2   1 34556666545666687776      34454 5899999999998 565321  11111


Q ss_pred             ----ccEEEeCCCcccc---CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcC
Q 043610          256 ----FGVIYAGAQKNVG---PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGG  328 (430)
Q Consensus       256 ----~d~~~~s~~K~~g---p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g  328 (430)
                          -|++  ...|.+|   .+ +|.++.++++.+...+.......+    ....++ ..|..+..++.++|+.+.+   
T Consensus       276 ~~v~PDi~--~~gK~lggG~~P-~~av~~~~~i~~~~~~~~~~~~~~----~h~~T~-~gnpl~~aaa~a~L~~i~~---  344 (460)
T PRK06105        276 FGIKPDIL--VMSKQLSSSYQP-LSAVLMNEKVYDPIADESGKIGTF----GHGFTA-SGHPVAAAVALENLAIIEE---  344 (460)
T ss_pred             cCCCCCee--eeecccccCccc-ceEEEEcHHHHHHHhcccccCccc----ccCCCC-CCCHHHHHHHHHHHHHHHh---
Confidence                2555  5579984   23 578888888876543211000000    011222 3455677777788998874   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc-ceEEEEcCCCc-----------hhHHHHHHHHHcCCeecCCC
Q 043610          329 LNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF-MNVPFTLEKSD-----------LEAEFVKEAAKEKMVQLKGH  396 (430)
Q Consensus       329 ~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~-~iv~f~~~~~~-----------~~~~~~~~L~~~Gi~~~~g~  396 (430)
                       +.+.++.+++.+++++.|.+.....++   ...|.- ....+.+.+..           ...++...+.++|+++.+. 
T Consensus       345 -~~l~~~v~~~g~~l~~~L~~l~~~~~v---~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~-  419 (460)
T PRK06105        345 -RDLVGNAAERGARLQARLRALADHPLV---GEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM-  419 (460)
T ss_pred             -ccHHHHHHHHHHHHHHHHHHhhcCCCe---EEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec-
Confidence             246677777777887777753111111   111222 23334442100           1124777788899998652 


Q ss_pred             CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          397 RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       397 ~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                        .+.+|+++....|++||+++++.|.+.+++
T Consensus       420 --g~~i~l~Ppl~it~~eid~~~~~l~~~l~~  449 (460)
T PRK06105        420 --GDTLAFCPPLIITAAQVDEMVDRFGRALDD  449 (460)
T ss_pred             --CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence              136999999888999999999999988764

>PRK12403 putative aminotransferase; Provisional

Probab=98.97  E-value=3.7e-07  Score=94.08  Aligned_cols=318  Identities=10%  Similarity=0.017  Sum_probs=167.4

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC----
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC----  155 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~----  155 (430)
                      --+|.|++++.+++.+....  +.+ .+..    .....++.+.|++++...-+ .++|+ +||++|+++++....    
T Consensus        70 h~hp~v~~A~~~q~~~~~~~--~~~-~~~~----~~~~~~lae~L~~~~p~~~~-~v~f~-~SGseA~e~AiklAr~~~~  140 (460)
T PRK12403         70 YGRKDLAAAAARQMEQLPYY--NMF-FHTT----HPAVIELSELLFSLLPGHYS-HAIYT-NSGSEANEVLIRTVRRYWQ  140 (460)
T ss_pred             CCCHHHHHHHHHHHHhCCCe--ecc-cccC----CHHHHHHHHHHHHhCCCCcC-EEEEe-CCcHHHHHHHHHHHHHHHH
Confidence            34689999999998763211  100 0001    12344666777777764323 67665 789999998766542    


Q ss_pred             ---CCCCcEEE-EeCChhHHHHHHHHHHh-C-C-----------ceEEecCCC--CcCCCC-C-----Cccccc--c---
Q 043610          156 ---TPNDPVDY-IVTGSWGDKAFKEAQKF-C-N-----------PQVIWSGKA--EKYTKI-P-----NFDALE--Q---  205 (430)
Q Consensus       156 ---~~gd~vl~-~~~g~~~~~~~~~a~~~-g-~-----------~~~v~~~~~--~~~g~~-~-----d~~~l~--i---  205 (430)
                         ++++.+++ ...++.|.-.  .+... + .           +..++....  .+++.. .     +.++++  +   
T Consensus       141 ~~g~~~r~~ii~~~~~yHG~t~--~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~  218 (460)
T PRK12403        141 VLGKPQKKIMIGRWNGYHGSTL--AATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL  218 (460)
T ss_pred             hhCCCCCcEEEEECCCcCcccH--hhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh
Confidence               23344443 3344433211  11111 1 1           111211000  000000 0     012332  2   


Q ss_pred             C-CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------ccccccccEEEeCCCcccc-
Q 043610          206 N-PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTRFGVIYAGAQKNVG-  268 (430)
Q Consensus       206 ~-~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~~d~~~~s~~K~~g-  268 (430)
                      . +++.+|++--+....|++.|      ++.++ +++|+++|+|++|. +|-.       ..++. -|+++  ..|.+| 
T Consensus       219 ~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~-PDiv~--~gK~lgg  295 (460)
T PRK12403        219 GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFE-PDTLS--IAKGLTS  295 (460)
T ss_pred             CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCC-CCeEE--Ecccccc
Confidence            1 34556666555666688776      34454 59999999999985 4321       12222 26665  789984 


Q ss_pred             -CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHH
Q 043610          269 -PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR-KKAELLYNV  346 (430)
Q Consensus       269 -p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~-~l~~~l~~~  346 (430)
                       ..-+|.+++++++.+........+.       .+.++ +.|..+.+++.++|+.+.++ +   +.++.+ ++.+++++.
T Consensus       296 G~~Piga~v~~~~i~~~~~~~~~~~~-------~~~T~-~gnPl~~Aaala~L~~i~~~-~---l~~~~~~~~g~~l~~~  363 (460)
T PRK12403        296 GYVPMGGLVLSKRIAEALVEQGGVFA-------HGLTY-SGHPVAAAVAIANLKALRDE-G---VVTRVKDDTGPYLQRC  363 (460)
T ss_pred             cccceEEEEECHHHHHHHhcCCCccc-------cCCCC-CCCHHHHHHHHHHHHHHHhc-c---HHHHHHHHHHHHHHHH
Confidence             2125666688887665321111010       01122 35667888888899988643 2   455553 556666666


Q ss_pred             HHccC-CceecCCCCCCCccceEEEEcCCC-c----------hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHH
Q 043610          347 IDGSN-GFYKCPVEKSVRSFMNVPFTLEKS-D----------LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAG  414 (430)
Q Consensus       347 l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~-~----------~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~ed  414 (430)
                      |++.. .+.++. +-..+.. ...+.+... .          ....+.+.+.++|+++...   .+.+|+++....|++|
T Consensus       364 L~~l~~~~~~i~-~vrG~Gl-~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---~~~~~l~Ppl~it~~e  438 (460)
T PRK12403        364 LREVFGDHPLVG-EVQGAGL-VAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST---LGRMIMAPALVAGRAE  438 (460)
T ss_pred             HHHHHhcCCCEE-eEeecce-EEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec---CCEEEEECCCCCCHHH
Confidence            65321 111111 1111222 233444210 0          0112445567789998642   1358999988899999


Q ss_pred             HHHHHHHHHHHHHh
Q 043610          415 VEKLVAFMKDFQAK  428 (430)
Q Consensus       415 v~~ll~~L~~~~~~  428 (430)
                      ++++++.|++.+.+
T Consensus       439 id~~~~~l~~al~~  452 (460)
T PRK12403        439 IDELVDKTRIAVDR  452 (460)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998764

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.96  E-value=3.3e-07  Score=94.19  Aligned_cols=333  Identities=10%  Similarity=0.025  Sum_probs=180.3

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+++.+......    .....+    ...++.+.|.++++..-+ .++|+ +
T Consensus        52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~----~~~~~~----~~~~lAe~L~~~~p~~~~-~v~f~-~  121 (453)
T PRK06943         52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML----AGCTHE----PAIELAERLAALTGGTLG-HAFFA-S  121 (453)
T ss_pred             CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc----cccCCH----HHHHHHHHHHHhCCCCCC-EEEEe-C
Confidence            344455555542     34578999999998865211000    001112    233555666666654323 67665 7


Q ss_pred             cHHHHHHHHHhhc-------CCC-CCcEEEEeCChhHHHHHHHH--------HHhC----CceEEecCCCCcCCCC----
Q 043610          142 GATTQFAAVPLNL-------CTP-NDPVDYIVTGSWGDKAFKEA--------QKFC----NPQVIWSGKAEKYTKI----  197 (430)
Q Consensus       142 gaT~a~~~~~~sl-------~~~-gd~vl~~~~g~~~~~~~~~a--------~~~g----~~~~v~~~~~~~~g~~----  197 (430)
                      |||+|++.++.-.       -.+ ..+|+.+..+|.|.-.....        +.++    .+..++...  .++..    
T Consensus       122 sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~  199 (453)
T PRK06943        122 DGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPD--ARGARPGET  199 (453)
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCC--ccccccCCC
Confidence            8999999876643       112 34677677665553111000        0011    122222211  01100    


Q ss_pred             ------CCccccc--c---CCCccEEEEee-cCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc
Q 043610          198 ------PNFDALE--Q---NPDAKYLHICA-NETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR  255 (430)
Q Consensus       198 ------~d~~~l~--i---~~~~~lv~i~~-~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~  255 (430)
                            -++++++  +   .+++..|++-- +....|++.+      ++.++ +++|+++|+|+++. +|-.  .+-.+.
T Consensus       200 ~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~  279 (453)
T PRK06943        200 AADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQ  279 (453)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHh
Confidence                  0123343  2   24555666643 2566788776      34454 58999999999975 5432  111111


Q ss_pred             ----ccEEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH
Q 043610          256 ----FGVIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGL  329 (430)
Q Consensus       256 ----~d~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~  329 (430)
                          -|+++.  .|.+|  ..=+|.+.+++++.+......+.     .....+.++ +.|..+..++.++|+.++++   
T Consensus       280 ~gv~PDivt~--gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~-----~~~~~~~T~-~gnpl~~aaa~a~L~~i~~~---  348 (453)
T PRK06943        280 AGVWPDFLCL--SKGISGGYLPLSLVLSRDAIFAAFYDDDVT-----RGFLHSHSY-TGNPLACRAALATLDLFAED---  348 (453)
T ss_pred             CCCCCCeEee--ehhhccCcccceEEEEcHHHHHhhcccCcc-----CCccCCCCC-CCCHHHHHHHHHHHHHHHhc---
Confidence                266665  78883  21268888898887654321100     000011222 34667788888899988742   


Q ss_pred             HHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC-CCc----hhHHHHHHHHHcCCeecCCCCCCCeeEE
Q 043610          330 NEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE-KSD----LEAEFVKEAAKEKMVQLKGHRSVGGMRA  404 (430)
Q Consensus       330 ~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~-~~~----~~~~~~~~L~~~Gi~~~~g~~~~g~iRi  404 (430)
                       .+.++.+++.+++++.|++......+. +-..+. ..+.+.+. +..    ...++.+.+.++|++..+..   ..+|+
T Consensus       349 -~l~~~~~~~G~~l~~~L~~l~~~~~v~-~vrG~G-l~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g---~~l~~  422 (453)
T PRK06943        349 -DVLARNARKSARLRAALAPLAAHPQVR-HLRQRG-TIFAFDVALDGDAARTFSRRFFEAALERELLLRPIG---TTVYL  422 (453)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHhcCCCEE-eEeccc-cEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC---CEEEE
Confidence             355666666777777776521111111 111122 23344443 211    12257778888999976421   35999


Q ss_pred             eecCCCCHHHHHHHHHHHHHHHHh
Q 043610          405 SIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       405 s~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++-..+|++||+++++.|++.+++
T Consensus       423 ~Ppl~it~~eid~~~~~l~~al~~  446 (453)
T PRK06943        423 MPPYVLDDDEIAWLAERTRATLDA  446 (453)
T ss_pred             eCCCcCCHHHHHHHHHHHHHHHHH
Confidence            988889999999999999988753

>PRK06062 hypothetical protein; Provisional

Probab=98.96  E-value=5.4e-07  Score=92.60  Aligned_cols=328  Identities=11%  Similarity=0.018  Sum_probs=176.7

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+++.+......     ....    +...++.+.|.++....-+ .|.|. +
T Consensus        51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-----~~~~----~~~~~lae~L~~~~p~~~~-~v~f~-~  119 (451)
T PRK06062         51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP-----AHAN----DARSEAARLIAERAPGDLS-KVFFT-N  119 (451)
T ss_pred             CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC-----ccCC----HHHHHHHHHHHHhCCCCCC-EEEEc-C
Confidence            344455555543     33478999999998865211100     0111    2233555666666543223 66664 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-C-----------ceEEecCCC--CcCCCCCC------
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-N-----------PQVIWSGKA--EKYTKIPN------  199 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-~-----------~~~v~~~~~--~~~g~~~d------  199 (430)
                      ||++|++.++.-.  .....+|+.+..++.|....-.. ..+ .           +..++....  .+++..-+      
T Consensus       120 SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  198 (451)
T PRK06062        120 GGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAIN-LTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECER  198 (451)
T ss_pred             ChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHh-hcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHH
Confidence            8999999876643  23345677777666553211111 011 0           111111100  00100001      


Q ss_pred             -ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------cccccccc
Q 043610          200 -FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTRFG  257 (430)
Q Consensus       200 -~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~~d  257 (430)
                       ++.++  +.    +++.+|++--+....|++.|      ++.++ +++|+++|+|++|. +|-.       ..++ .-|
T Consensus       199 ~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PD  277 (451)
T PRK06062        199 ALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPD  277 (451)
T ss_pred             HHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCC
Confidence             23344  32    34566766656666788876      34554 58999999999987 4421       1122 126


Q ss_pred             EEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610          258 VIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM  335 (430)
Q Consensus       258 ~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~  335 (430)
                      ++  ++.|.+|  ..=+|.++.++++.+.... .++        ..+.++ +-|..+..++.++|+.++++    .+.++
T Consensus       278 i~--t~gK~lggG~~Pigav~~~~~i~~~~~~-~~~--------~~~~T~-~gnpl~~Aaa~a~L~~l~~~----~l~~~  341 (451)
T PRK06062        278 LI--TFAKGVNSGYVPLGGVAISEAIAATFAD-RPY--------PGGLTY-SGHPLACAAAVATINAMEEE----GIVEN  341 (451)
T ss_pred             ee--eechhhhcCCcCcEEEEEcHHHHHHhcc-CCC--------CCCCCC-CCCHHHHHHHHHHHHHHHhc----CHHHH
Confidence            55  4689994  1115777788888765421 110        011233 34566778888899988643    35555


Q ss_pred             HHHHH-HHHHHHHHccC-CceecCCCCCCCccceEEEEcCC-C-------------chhHHHHHHHHHcCCeecCCCCCC
Q 043610          336 NRKKA-ELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEK-S-------------DLEAEFVKEAAKEKMVQLKGHRSV  399 (430)
Q Consensus       336 ~~~l~-~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~-~-------------~~~~~~~~~L~~~Gi~~~~g~~~~  399 (430)
                      .+++. +++++.|++.. .+..+. +-.... ..+.+.+.. .             .....+.+.|.++||+....   .
T Consensus       342 ~~~~G~~~l~~~L~~l~~~~~~v~-~vrG~G-l~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~---~  416 (451)
T PRK06062        342 AARIGAEVLGPGLRELAERHPSVG-EVRGLG-VFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN---G  416 (451)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEE-eEeccc-cEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec---C
Confidence            55555 35555555421 111110 100111 123333311 0             01225778888999997532   2


Q ss_pred             CeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          400 GGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       400 g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+|+++...+|++||++++++|++.+++
T Consensus       417 ~~lrl~ppl~~t~~eid~~~~~l~~~l~~  445 (451)
T PRK06062        417 NRIHVVPPCTVTEDEVREGLAILDAALAV  445 (451)
T ss_pred             CEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence            46999998889999999999999998764

>PRK08297 L-lysine aminotransferase; Provisional

Probab=98.95  E-value=7.4e-07  Score=91.42  Aligned_cols=203  Identities=10%  Similarity=0.067  Sum_probs=119.9

Q ss_pred             CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc-------cccccccEEEeCCCccccCCc
Q 043610          207 PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP-------VDVTRFGVIYAGAQKNVGPSG  271 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~-------idl~~~d~~~~s~~K~~gp~G  271 (430)
                      +++.+|++--+....|++.|      ++.++ +++|+++|+|+++. +|---       .++ .-|+++  +.|.+++  
T Consensus       224 ~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~--~gK~l~~--  298 (443)
T PRK08297        224 HDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVA--FGKKTQV--  298 (443)
T ss_pred             CcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEEE--ecccccc--
Confidence            45677777666666787766      34554 58999999999985 54321       122 236665  5788743  


Q ss_pred             cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                       |.+++++++.+....    .+...  ...+.++ +.|..+..++.++|+.+.+.    ++.++.+++.+++++.|++..
T Consensus       299 -~a~l~~~~i~~~~~~----~~~~~--~~~~~T~-~gnpl~~aaa~a~L~~l~~~----~l~~~~~~~g~~l~~~L~~l~  366 (443)
T PRK08297        299 -CGIMAGRRVDEVEDN----VFAVS--SRINSTW-GGNLVDMVRARRILEVIEED----GLVENAARQGEYLLARLEELA  366 (443)
T ss_pred             -cceecchHHHHhhhh----hccCc--cccCCCC-CccHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHH
Confidence             233445443221100    00000  0011222 34666777888888877642    455666666667766666421


Q ss_pred             -CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          352 -GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       352 -G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       .+..+..+-..+. .++.+.+++......+.+.|.++||++.+..  ...+||++...++++|+++++++|++.+++-
T Consensus       367 ~~~~~~~~~vrg~G-~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~--~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        367 AEFPAVVSNVRGRG-LMCAFDLPTTADRDEVIRRLWEEGVLVLPCG--ERSIRFRPALTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             HHCCCcceeeeccc-eEEEEEecCHHHHHHHHHHHHHCCEEEecCC--CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence             1111100111123 3455666542222368888889999986532  2369999998999999999999999988753

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.95  E-value=2.1e-07  Score=87.96  Aligned_cols=309  Identities=15%  Similarity=0.134  Sum_probs=189.1

Q ss_pred             CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHH-HHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--
Q 043610           78 PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKE-FKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--  154 (430)
Q Consensus        78 p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~-~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--  154 (430)
                      .+--.|.++++++++.+..-        ++  +.. ..+.+.+..+.+.++||-+   .|+-+ +.|.||.+.++.=.  
T Consensus        73 qGhchpki~~aLqeq~~kLt--------ls--srafYnd~~~~f~~~vt~lf~~~---kvlpm-nTGaEa~Eta~KLaR~  138 (427)
T KOG1402|consen   73 QGHCHPKIIKALQEQADKLT--------LS--SRAFYNDVLGEFAEYVTKLFGYD---KVLPM-NTGAEAVETACKLARK  138 (427)
T ss_pred             cCCCCHHHHHHHHHHHhHhh--------hh--hHHHhhhhHHHHHHHHHHhcCcc---eeeec-ccchhHHHHHHHHHHH
Confidence            35568899999999875411        11  222 2466677888999999986   46665 56789988663321  


Q ss_pred             C----C--CCCcEEE--EeCChhHHHHH--------HHHHHhC--CceEEecCCCCcCCCCCCccccc--c-CCCccEEE
Q 043610          155 C----T--PNDPVDY--IVTGSWGDKAF--------KEAQKFC--NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLH  213 (430)
Q Consensus       155 ~----~--~gd~vl~--~~~g~~~~~~~--------~~a~~~g--~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~  213 (430)
                      +    +  |.++..+  ..+.++|.-..        +.-+.+|  -+-++...   +||   |.++|+  + +++++.++
T Consensus       139 wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v---~Y~---d~eale~~l~~~~vaaFi  212 (427)
T KOG1402|consen  139 WGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKV---PYG---DAEALEVALKSPNVAAFI  212 (427)
T ss_pred             HHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceee---ccC---CHHHHHHHhcCCCeeEEE
Confidence            1    2  4444433  23334432100        0011223  11101110   133   234555  3 56777777


Q ss_pred             EeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCC-----ccccccc--cEEEeCCCccc-c-CCccEEEEE
Q 043610          214 ICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRF--GVIYAGAQKNV-G-PSGVTIVIV  277 (430)
Q Consensus       214 i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~--d~~~~s~~K~~-g-p~G~g~l~v  277 (430)
                      +--....-|++.|      +..++ .+|++++++|++|.-.+.     .+|.+..  |+++.  .|.+ | ..=+..+.+
T Consensus       213 vEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivil--gKalSGG~~Pvsavl~  290 (427)
T KOG1402|consen  213 VEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVIL--GKALSGGVYPVSAVLA  290 (427)
T ss_pred             eeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEE--eccccCCeeeeEEEEe
Confidence            7667888899999      24444 599999999999985442     2455444  76654  4777 3 333666777


Q ss_pred             cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecC
Q 043610          278 RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP  357 (430)
Q Consensus       278 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~  357 (430)
                      +++++-.+.|   .        +.++++| -|..+...+.++|+.+.+    +.+.+|.++|.+.|+++|.+.. -++..
T Consensus       291 ~~~im~~~~p---g--------eHgsTyg-gNpLg~~vaiAalevi~e----ekL~era~~lG~~l~~~L~~l~-~~~p~  353 (427)
T KOG1402|consen  291 DDDIMLNIKP---G--------EHGSTYG-GNPLGCAVAIAALEVIVE----EKLVERAAKLGEILRDQLNKLQ-KKFPH  353 (427)
T ss_pred             cHHHHhccCC---C--------ccccccC-CChHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcc-ccccc
Confidence            8887654332   1        2345553 466777888899998874    6889999999999999999742 22211


Q ss_pred             CCCCCCccc-eEEEEcC---CCchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          358 VEKSVRSFM-NVPFTLE---KSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       358 ~~~~~rs~~-iv~f~~~---~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +-...|.-+ .+.+.+.   ..+.+. +++-.|++.|+..-+.|.  ..||+++-...+++|++.-++++++.+.
T Consensus       354 ~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~--~IiRfaPPL~I~e~dl~eg~e~i~k~i~  426 (427)
T KOG1402|consen  354 VVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHG--NIIRFAPPLVISEEDLREGIEAIEKTIA  426 (427)
T ss_pred             hhheeeccceEEEEEeccccccchhHHHHHHcccccccccCCCCC--CeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence            111223222 2222222   122344 577777888988766553  3799999999999999999999998753

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.94  E-value=1.2e-07  Score=92.72  Aligned_cols=300  Identities=13%  Similarity=0.097  Sum_probs=179.1

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH---HhhcC-CCC----CcEEEEeCChhHHHHHHHHHHhC-
Q 043610          111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV---PLNLC-TPN----DPVDYIVTGSWGDKAFKEAQKFC-  181 (430)
Q Consensus       111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~---~~sl~-~~g----d~vl~~~~g~~~~~~~~~a~~~g-  181 (430)
                      +...+++.+++++|+++.|.+   .|-+-..+|..+=.+-   +...- ..|    +.+++.+.- .|..-.. |.-.| 
T Consensus       105 qG~l~li~~Lq~~L~~ITG~D---avsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SA-HGTNPAS-Aam~G~  179 (496)
T COG1003         105 QGYLELIYELQEWLKEITGMD---AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSA-HGTNPAS-AAMAGF  179 (496)
T ss_pred             HHHHHHHHHHHHHHHHhcCCc---eeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccc-cCCChhh-HhhcCc
Confidence            456789999999999999997   4555445555443322   33331 222    345544432 2322111 33457 


Q ss_pred             CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC---CCccc-cCCCcEEEEeccCc---CCC-Ccc
Q 043610          182 NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK---EYPSA-KNSTGILVADMSSN---FCS-KPV  251 (430)
Q Consensus       182 ~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p---ei~~~-~~~g~~lvvD~a~s---~G~-~~i  251 (430)
                      ++++|+.++   .| .+|+++|+  +.+++..+++++++|- |+--.   ||+++ +++|..++.|++--   +|. .|=
T Consensus       180 ~VV~V~~~~---~G-~VDlddLk~k~~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPG  254 (496)
T COG1003         180 KVVVVKCDE---NG-NVDLDDLRAKAEDNLAALMITNPSTL-GVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPG  254 (496)
T ss_pred             eEEEEecCC---CC-CccHHHHHHHhccceeEEEeccCccc-ccchhhHHHHHHHHHHcCCEEEecCcchhhhhcccccc
Confidence            898888864   46 58999998  6889999999987774 66655   77776 79999999999732   332 233


Q ss_pred             ccccccEEEeCCCcccc-CCc-----cEEEEEcHHHHhccCC-C-----CCccccccch--h-hcCCCCCCccHHHHHHH
Q 043610          252 DVTRFGVIYAGAQKNVG-PSG-----VTIVIVRKDLLGNAQD-K-----TPLMLDYKIH--D-ENNSLYNTPPCYCIYMC  316 (430)
Q Consensus       252 dl~~~d~~~~s~~K~~g-p~G-----~g~l~v~~~~~~~~~~-~-----~p~~~~~~~~--~-~~~~~~~T~~~~~~~a~  316 (430)
                      |+ .+|++=...||.|. |.|     .|-+.++..+..-+.. .     ..+.+++..-  . .....+|..+.  +.-.
T Consensus       255 d~-G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~i--l~~a  331 (496)
T COG1003         255 DM-GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASI--LPIA  331 (496)
T ss_pred             cc-ccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchH--HHHH
Confidence            44 24789999999994 654     7778888776543321 0     0001111100  0 00011222221  1111


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC----CCchhH-HHHHHHHHcCCe
Q 043610          317 GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE----KSDLEA-EFVKEAAKEKMV  391 (430)
Q Consensus       317 ~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~----~~~~~~-~~~~~L~~~Gi~  391 (430)
                      ...+..+- ..|+...-+.---.++++..+|++  .+.+.- .+..+..+-+.+...    ..+... +++++|.+.|+-
T Consensus       332 ~~YI~~mG-~~GL~~ase~AvLNANYia~rL~~--~y~~~y-~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfH  407 (496)
T COG1003         332 WAYIRMMG-ADGLKQASEVAVLNANYIARRLKG--YYPVPY-TGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFH  407 (496)
T ss_pred             HHHHHHHh-HHHHHHHHHHHHHhHHHHHHHhhh--cCcccc-CCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCC
Confidence            22233333 237888888888889999999985  344431 222223333444433    123444 799999999987


Q ss_pred             ecC---CCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          392 QLK---GHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       392 ~~~---g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .-.   ...-.+.+=|=+.-.-+.+++|+++++|+.+.+
T Consensus       408 aPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~  446 (496)
T COG1003         408 APTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIRE  446 (496)
T ss_pred             CCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHH
Confidence            321   111234566666656678999999999998765

>PRK07483 hypothetical protein; Provisional

Probab=98.93  E-value=5.8e-07  Score=92.19  Aligned_cols=333  Identities=13%  Similarity=0.051  Sum_probs=175.9

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+++.+......    .....    +...++.+.|.+++...-+ .++| ++
T Consensus        28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~----~~~~~----~~~~~lae~L~~~~p~~~~-~v~f-~~   97 (443)
T PRK07483         28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHT----SFFTT----EPAEALADRLVAAAPAGLE-HVYF-VS   97 (443)
T ss_pred             CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccc----cccCC----HHHHHHHHHHHHhCCCCCC-EEEE-cC
Confidence            344455555542     33478999999999865210000    00111    2233555666666542223 6666 48


Q ss_pred             cHHHHHHHHHhhc--C-----CCC-CcEEEEeCChhHHHHHHHHH--------HhC----CceEEecCCCCcCCCCC---
Q 043610          142 GATTQFAAVPLNL--C-----TPN-DPVDYIVTGSWGDKAFKEAQ--------KFC----NPQVIWSGKAEKYTKIP---  198 (430)
Q Consensus       142 gaT~a~~~~~~sl--~-----~~g-d~vl~~~~g~~~~~~~~~a~--------~~g----~~~~v~~~~~~~~g~~~---  198 (430)
                      ||++|++.++.-.  .     ++| .+|+.+..+|.|.-..-...        .++    .+..++...  .+....   
T Consensus        98 sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~  175 (443)
T PRK07483         98 GGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGE  175 (443)
T ss_pred             CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc--cccccccCC
Confidence            8999999775532  1     133 35666666655532111110        011    111121110  011000   


Q ss_pred             C--------ccccc--c----CCCccEEEEeecCC-CccccCC------CCccc-cCCCcEEEEeccCc-CCCC------
Q 043610          199 N--------FDALE--Q----NPDAKYLHICANET-IHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK------  249 (430)
Q Consensus       199 d--------~~~l~--i----~~~~~lv~i~~~~t-~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~------  249 (430)
                      +        +++++  +    .+++.+|++--+.. ..|++.+      .+.++ +++|+++|+|++|. +|--      
T Consensus       176 ~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~  255 (443)
T PRK07483        176 SDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFAC  255 (443)
T ss_pred             CHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHH
Confidence            0        12333  2    13455566544443 2466666      24444 58999999999976 5421      


Q ss_pred             -ccccccccEEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          250 -PVDVTRFGVIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       250 -~idl~~~d~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                       ..++ +-|+++.  .|.+|  ..=+|.+.+++++.+...+. +..+      ..++++ ..|..+..++.++|+.++++
T Consensus       256 ~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~i~~~~~~~-~~~~------~h~~T~-~gnpl~~aaa~a~l~~i~~~  324 (443)
T PRK07483        256 EEDGV-APDLVTI--AKGLGAGYQPIGAVLASDRIYDAIADG-SGFF------QHGHTY-LGHATACAAALAVQRVIAED  324 (443)
T ss_pred             hhcCC-CCCeeee--hhhhccCccccEEEEEcHHHHHHHhcC-CCcc------ccCCCC-CCCHHHHHHHHHHHHHHHhc
Confidence             1122 1265554  78883  21278888898887654321 1000      011232 34666778888899988743


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEEEEcCCC-----------chhHHHHHHHHHcCCeecC
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLEKS-----------DLEAEFVKEAAKEKMVQLK  394 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~~~-----------~~~~~~~~~L~~~Gi~~~~  394 (430)
                          .+.++.+++.+++++.|++. ..+..+. +-.-+.. .+.+.+.+.           ....++.+.+.++|+++.+
T Consensus       325 ----~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~vRG~Gl-m~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~  398 (443)
T PRK07483        325 ----GLLANVRARGEQLRARLRERLGQHPHVG-DIRGRGL-FVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYP  398 (443)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHhcCCCee-eEeeccc-EEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEe
Confidence                45666666667777776542 1121110 1111221 233433210           0112577788899999864


Q ss_pred             CCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          395 GHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       395 g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...     ....||+.+-...+++|+++++++|++.+++
T Consensus       399 ~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~  437 (443)
T PRK07483        399 MGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDA  437 (443)
T ss_pred             cCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            211     1247999999999999999999999988763

>PRK06917 hypothetical protein; Provisional

Probab=98.93  E-value=9.2e-07  Score=90.83  Aligned_cols=319  Identities=9%  Similarity=-0.013  Sum_probs=170.0

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc------
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL------  154 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl------  154 (430)
                      -.|.|.+++++.+.+......     ....   .+...++.+.|.+++....+ .++|+ +|||+|++.++.-.      
T Consensus        48 ~hp~v~~Ai~~ql~~~~~~~~-----~~~~---~~~~~~lae~L~~~~p~~~~-~v~f~-~sGsEAve~AlklAr~~~~~  117 (447)
T PRK06917         48 GVKEIADAIKEQAEEVSFVYR-----SQFT---SEPAEKLAKKLSDLSPGDLN-WSFFV-NSGSEANETAMKIAIQHFQE  117 (447)
T ss_pred             CCHHHHHHHHHHHhhCcCccc-----cccC---CHHHHHHHHHHHHhCCCCCC-EEEEe-CChHHHHHHHHHHHHHHHHh
Confidence            488999999998875211000     0011   12334566667676643322 56664 78999999876643      


Q ss_pred             -CCCC-CcEEEEeCChhHHHHHHHHHHhC-C------------ceEEecCCC--CcCCCCC------Cccccc--cC---
Q 043610          155 -CTPN-DPVDYIVTGSWGDKAFKEAQKFC-N------------PQVIWSGKA--EKYTKIP------NFDALE--QN---  206 (430)
Q Consensus       155 -~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~------------~~~v~~~~~--~~~g~~~------d~~~l~--i~---  206 (430)
                       ..+| .+|+.+..++.|.-..-.. ..+ .            +..++....  .+++...      +++.++  ++   
T Consensus       118 rg~t~r~~ii~~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~  196 (447)
T PRK06917        118 RGIQGKHKILSRWMSYHGITMGALS-MSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG  196 (447)
T ss_pred             cCCCCCCEEEEECCCcCCccHHHHH-hcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC
Confidence             1133 4666666555553211111 111 0            111111000  0001000      112333  22   


Q ss_pred             -CCccEEEEeecCCC-ccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------ccccccccEEEeCCCcccc-
Q 043610          207 -PDAKYLHICANETI-HGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTRFGVIYAGAQKNVG-  268 (430)
Q Consensus       207 -~~~~lv~i~~~~t~-tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~~d~~~~s~~K~~g-  268 (430)
                       +++..|++--.... -|++.|      .+.++ +++|+++++|+++. +|-.       ..++. -|++  +..|.+| 
T Consensus       197 ~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~-PDi~--~~gK~l~~  273 (447)
T PRK06917        197 AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVE-PDIM--TLGKGLGA  273 (447)
T ss_pred             CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCC-CCEE--Eeeehhcc
Confidence             24555555433332 356666      24444 58999999999976 4321       11221 2654  4489994 


Q ss_pred             -C-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          269 -P-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       269 -p-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                       . | +|.+.+++++.+...+....++       .+.++ +.|..+..++.++|+.+.+.    .+.++.+++.++|++.
T Consensus       274 G~~P-i~a~~~~~~i~~~~~~~~~~~~-------~~~T~-~gnpl~~aaa~a~l~~l~~~----~l~~~~~~~g~~l~~~  340 (447)
T PRK06917        274 GYTP-IAATVVSDRVMEPILRGSRSIM-------SGHTL-SANPLSAATALAVLEYMEKH----NLPEKAAEKGEYLIKG  340 (447)
T ss_pred             CCcc-eEEEEEcHHHHHHHhccCcccc-------cccCC-CCCHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHH
Confidence             2 3 6788888888765422111111       11122 34666788888899987642    3566777777777777


Q ss_pred             HHccC-CceecCCCCCCCccceEEEEcC-CC----------chhHHHHHHHHHcCCeecCCCC-----CCCeeEEeecCC
Q 043610          347 IDGSN-GFYKCPVEKSVRSFMNVPFTLE-KS----------DLEAEFVKEAAKEKMVQLKGHR-----SVGGMRASIYNA  409 (430)
Q Consensus       347 l~~~~-G~~~~~~~~~~rs~~iv~f~~~-~~----------~~~~~~~~~L~~~Gi~~~~g~~-----~~g~iRis~~~~  409 (430)
                      |++.. .+.++. +-.-+. ..+.+.+. +.          .....+.+.+.++|+++.+...     ..+.+|+++...
T Consensus       341 L~~l~~~~~~i~-~vrG~G-l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~  418 (447)
T PRK06917        341 LQKVQQQSTIIG-DVRGKG-LLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMT  418 (447)
T ss_pred             HHHHHhcCCCEE-EEeecc-eEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCc
Confidence            76521 111110 111122 23334441 10          1122577788889999865311     124799999988


Q ss_pred             CCHHHHHHHHHHHHHHHHh
Q 043610          410 MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       410 ~t~edv~~ll~~L~~~~~~  428 (430)
                      +|++||++++++|.+.+++
T Consensus       419 it~~eid~~~~~l~~~l~~  437 (447)
T PRK06917        419 ITYSELDELLSIFAKSVEE  437 (447)
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            9999999999999988764

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=98.91  E-value=1.1e-06  Score=89.87  Aligned_cols=321  Identities=11%  Similarity=0.014  Sum_probs=172.9

Q ss_pred             CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-.     --.|.|.+++.+++.+...     +...  .+.    ..++.+.|.+++.- .+ .+.|+ +|
T Consensus        52 G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-----~~~~--~~~----~~~la~~l~~~~p~-~~-~v~f~-~s  117 (428)
T PRK12389         52 GNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL-----YGTP--TEL----EIEFAKMLKEAIPS-LE-KVRFV-NS  117 (428)
T ss_pred             CCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc-----cCCC--CHH----HHHHHHHHHHhCCC-Cc-EEEEe-CC
Confidence            344444544432     2368899999998864210     0011  122    23455555555531 23 67765 78


Q ss_pred             HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEE--ecCC----C--CcCC--CCCCccccc--c--
Q 043610          143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVI--WSGK----A--EKYT--KIPNFDALE--Q--  205 (430)
Q Consensus       143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v--~~~~----~--~~~g--~~~d~~~l~--i--  205 (430)
                      |++|++.++.-.  .....+|+.+..++.|....-.. ..+ .....  +...    .  .+.-  ...|+++++  +  
T Consensus       118 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  196 (428)
T PRK12389        118 GTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLV-AAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDK  196 (428)
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHH-hcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHh
Confidence            999999876643  23345677777666663211111 112 11000  0000    0  0000  012344554  3  


Q ss_pred             -CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCC-CC------ccccccccEEEeCCCcccc--
Q 043610          206 -NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFC-SK------PVDVTRFGVIYAGAQKNVG--  268 (430)
Q Consensus       206 -~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G-~~------~idl~~~d~~~~s~~K~~g--  268 (430)
                       .+++.+|++--+....|++.|      +|.++ +++|+++++|+++... ..      ..++ .-|++  +..|.+|  
T Consensus       197 ~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv-~PDiv--t~gK~lggG  273 (428)
T PRK12389        197 WGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGV-EPDLT--ALGKIIGGG  273 (428)
T ss_pred             cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCC-CCCee--eechhhcCC
Confidence             235666666656677788877      34454 5899999999998732 11      1122 12554  5689993  


Q ss_pred             CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          269 PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       269 p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      .+ +|.+.+++++.+...+..+.++        +.++ +.|....+++.++|+.+.++    .+.++.+++.+++++.|+
T Consensus       274 ~P-i~av~~~~~i~~~~~~~~~~~~--------~~T~-~gnpl~~Aaala~L~~l~~~----~l~~~~~~~g~~l~~~L~  339 (428)
T PRK12389        274 LP-IGAYGGRKDIMEQVAPLGPAYQ--------AGTM-AGNPASMAAGIACLEVLQQE----GVYEKLDRLGAMLEEGIL  339 (428)
T ss_pred             Cc-eeEEeEHHHHHhhhccCCCccc--------ccCC-ccCHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHH
Confidence            22 5666889888776432111111        1222 34666778888889987642    466677777777777776


Q ss_pred             cc---CCceecCCCCCCCccceEEEEcCCC-----------c--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCH
Q 043610          349 GS---NGFYKCPVEKSVRSFMNVPFTLEKS-----------D--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL  412 (430)
Q Consensus       349 ~~---~G~~~~~~~~~~rs~~iv~f~~~~~-----------~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~  412 (430)
                      +.   .++..   +- .|....+.+.+.+.           .  ....+.+.|.++||++.+..  .+.+.+  ...+++
T Consensus       340 ~l~~~~~~~~---~v-~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~~--~l~~t~  411 (428)
T PRK12389        340 EAAEKHGITI---TI-NRLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK--YEAWFL--TTAHTE  411 (428)
T ss_pred             HHHHhCCCCE---EE-EecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC--CCCeee--cCCCCH
Confidence            52   22211   00 02112233332110           0  11257778888999986531  122444  445699


Q ss_pred             HHHHHHHHHHHHHHHh
Q 043610          413 AGVEKLVAFMKDFQAK  428 (430)
Q Consensus       413 edv~~ll~~L~~~~~~  428 (430)
                      +|+++++++|++.+++
T Consensus       412 e~id~~~~~l~~~l~~  427 (428)
T PRK12389        412 EDIEETLEAVDRAFAQ  427 (428)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998864

>PRK06149 hypothetical protein; Provisional

Probab=98.91  E-value=8.2e-07  Score=99.47  Aligned_cols=313  Identities=11%  Similarity=0.036  Sum_probs=175.3

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g  158 (430)
                      -+|.|.+++.+.+.+...  .+.  ..      .+...+..+.|++++...-+ .++|+ +||++|++.++.-.  ....
T Consensus       600 ~hp~v~~Ai~~q~~~l~~--~~~--~~------~~~~~elae~L~~~~p~~~~-~v~f~-~SGsEA~e~AlklAr~~tgr  667 (972)
T PRK06149        600 GHPRLAAAAARQWSLLNT--NSR--FH------YAAVAEFSERLAALAPDGLD-TVFLV-NSGSEANDLAIRLAWAASGR  667 (972)
T ss_pred             CCHHHHHHHHHHHHhccc--ccc--cc------CHHHHHHHHHHHHhCCCCcC-EEEEe-CCchHHHHHHHHHHHHhcCC
Confidence            578999999988864211  111  11      13344666777777732222 56665 78999999887621  2334


Q ss_pred             CcEEEEeCChhHHHHH--HH-HH-----Hh-C----CceEEecCCC--CcCCCCCC-----ccc----cc-c---CCCcc
Q 043610          159 DPVDYIVTGSWGDKAF--KE-AQ-----KF-C----NPQVIWSGKA--EKYTKIPN-----FDA----LE-Q---NPDAK  210 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~--~~-a~-----~~-g----~~~~v~~~~~--~~~g~~~d-----~~~----l~-i---~~~~~  210 (430)
                      .+++.+..++.|.-..  .. ..     .. +    .+..++....  .+++. .+     .++    ++ +   .+++.
T Consensus       668 ~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~iA  746 (972)
T PRK06149        668 RDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRG-ADSAADYVRDVVAQLEELDASGRGLA  746 (972)
T ss_pred             CeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCC-cccHHHHHHHHHHHHHHHhhcCCceE
Confidence            5677777666552110  00 00     00 0    0112211110  00110 01     112    22 1   13455


Q ss_pred             EEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCCc--------cccccccEEEeCCCcccc--CCcc
Q 043610          211 YLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSKP--------VDVTRFGVIYAGAQKNVG--PSGV  272 (430)
Q Consensus       211 lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~~--------idl~~~d~~~~s~~K~~g--p~G~  272 (430)
                      +|++=-+....|.+.+      ++.++ +++|+++|+|++| ++|-.-        .++ .-|++  +..|.+|  .+ +
T Consensus       747 avI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDiv--t~gK~lg~G~P-l  822 (972)
T PRK06149        747 GFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDII--TMAKGMGNGHP-L  822 (972)
T ss_pred             EEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEE--EecccccCCee-e
Confidence            5555444555677766      34554 5899999999998 565421        122 12665  5689994  22 6


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG  352 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G  352 (430)
                      |.+++++++.+..... ..+         ++++ +.|..+..++.++|+.++++    .+.++.+++.++++++|++...
T Consensus       823 ~av~~~~~i~~~~~~~-~~~---------~sT~-~gnP~~~aaala~L~~i~~e----~l~~~~~~~G~~l~~~L~~l~~  887 (972)
T PRK06149        823 GAVITRREIAEALEAE-GYF---------FSST-GGSPVSCRIGMAVLDVLREE----KLQENARRVGDHLKARLEALAD  887 (972)
T ss_pred             EEEEEcHHHHhhhccC-Ccc---------cCCC-CCCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHH
Confidence            8888999887654321 111         1222 34666777888889987642    4666777777777777765311


Q ss_pred             -ceecCCCCCCCcc-ceEEEEcC-C-----Cc--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          353 -FYKCPVEKSVRSF-MNVPFTLE-K-----SD--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       353 -~~~~~~~~~~rs~-~iv~f~~~-~-----~~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                       ..++   ...|.. ..+.+.+. +     ..  ....+.++|.++||++.+.....+.|||.+-...+++|++.++++|
T Consensus       888 ~~~~i---~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l  964 (972)
T PRK06149        888 RHPLI---GAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDML  964 (972)
T ss_pred             hCCCe---EEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHH
Confidence             1111   111211 22334432 1     01  1125778888999998653222357999998888999999999999


Q ss_pred             HHHHHh
Q 043610          423 KDFQAK  428 (430)
Q Consensus       423 ~~~~~~  428 (430)
                      .+.+.+
T Consensus       965 ~~~l~~  970 (972)
T PRK06149        965 DRVLTE  970 (972)
T ss_pred             HHHHHh
Confidence            998865

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=98.90  E-value=1.2e-06  Score=90.32  Aligned_cols=332  Identities=14%  Similarity=0.079  Sum_probs=175.0

Q ss_pred             CCCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEE
Q 043610           66 GQEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLF  138 (430)
Q Consensus        66 ~~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~  138 (430)
                      ...++.+.+..|-     +--+|.|.+++++++.+-..  ...  .....+.    ..++.+.|.+++...  ..+.++|
T Consensus        60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~--~~~~~~~----~~~la~~L~~~~p~~~~~~~~v~f  131 (464)
T PRK06938         60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP--LHT--LDLTTPV----KDQFVQDLFASLPEAFAREAKIQF  131 (464)
T ss_pred             CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhc--ccc--cccCCHH----HHHHHHHHHHhCcccccccceEEE
Confidence            3444455565554     23478999999998853110  000  0011122    223334455544321  1125666


Q ss_pred             EeCcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHH--------hC----CceEEecCCC--CcCCCC-----
Q 043610          139 LQGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQK--------FC----NPQVIWSGKA--EKYTKI-----  197 (430)
Q Consensus       139 ~~~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~--------~g----~~~~v~~~~~--~~~g~~-----  197 (430)
                      +++||+||++.++.-.  .....+|+.+..++.|.-..-....        ++    .+..++....  .+++..     
T Consensus       132 ~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  211 (464)
T PRK06938        132 CGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGV  211 (464)
T ss_pred             eCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHH
Confidence            6568999999876543  2234566666666555321111100        01    1222222110  000000     


Q ss_pred             -CCccccc--cC------CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------cccc
Q 043610          198 -PNFDALE--QN------PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDV  253 (430)
Q Consensus       198 -~d~~~l~--i~------~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl  253 (430)
                       .+++.++  +.      +++..|++--+....|++.|      ++.++ +++|+++|+|+++. +|-.       ..++
T Consensus       212 ~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv  291 (464)
T PRK06938        212 RANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI  291 (464)
T ss_pred             HHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC
Confidence             0123343  22      13556666445555677766      34554 58999999999976 5421       1222


Q ss_pred             ccccEEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHH
Q 043610          254 TRFGVIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNE  331 (430)
Q Consensus       254 ~~~d~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~  331 (430)
                      . -|+++.  .|.+|  .| +|.++.++++ +...   +..        .++++ +.|..+..++.++|+.+.+    +.
T Consensus       292 ~-PDiv~~--gKglggG~P-lsAv~~~~~~-~~~~---~~~--------~~~T~-~gnpla~Aaa~a~L~~l~~----~~  350 (464)
T PRK06938        292 I-PDVVVL--SKAIGGSLP-LAVVVYREWL-DTWQ---PGA--------HAGTF-RGNQMAMAAGSATLRYIKE----HR  350 (464)
T ss_pred             C-CCEEEe--eccccCCCc-eEEEeehhHh-hccC---CCC--------CCCCC-CcCHHHHHHHHHHHHHHHH----hH
Confidence            1 266655  68883  22 6777777764 4321   111        11232 3455677888888988764    35


Q ss_pred             HHHHHHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcCCC--------------chhHHHHHHHHHcCCeecCCC
Q 043610          332 VEKMNRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEKS--------------DLEAEFVKEAAKEKMVQLKGH  396 (430)
Q Consensus       332 v~~~~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~--------------~~~~~~~~~L~~~Gi~~~~g~  396 (430)
                      +.++.+++.+++++.|++.. ...++. +-..+. ..+.+.+.+.              .....+...+.++|+++.++.
T Consensus       351 l~~~~~~~G~~l~~~L~~l~~~~~~i~-~VrG~G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g  428 (464)
T PRK06938        351 LAEHAAAMGERLREHLRQLQRDYPQLG-DVRGRG-LMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGG  428 (464)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCee-eeeccc-eEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecC
Confidence            66677777777777776531 121111 111122 2233444210              011246777888999886532


Q ss_pred             CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          397 RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       397 ~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .....||+.+...+|++|+++++++|++.+..
T Consensus       429 ~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~  460 (464)
T PRK06938        429 RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA  460 (464)
T ss_pred             CCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence            22347999988899999999999999998764

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=98.90  E-value=6.3e-08  Score=93.32  Aligned_cols=268  Identities=19%  Similarity=0.184  Sum_probs=136.4

Q ss_pred             HHHHHHHHHH-hhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEE--EEEeCcHHHHHHHHHhhcCCCCC
Q 043610           83 EKVLLKAQSE-LYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSV--LFLQGGATTQFAAVPLNLCTPND  159 (430)
Q Consensus        83 ~~V~~a~~~~-~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~v--v~~~~gaT~a~~~~~~sl~~~gd  159 (430)
                      ..|+++|++. +.+..-.+.+.|.   +++.-   .+.+++.+|++||+.+. -|  -|+  |+|.|+..++.++++|||
T Consensus        27 ~KVL~Af~~~~vs~~hf~~tTGYG---Y~D~G---Rd~le~iyA~vfgaE~A-LVRpq~v--SGTHAi~~~Lfg~LrpGD   97 (403)
T PF06838_consen   27 LKVLKAFQENRVSDSHFAGTTGYG---YDDIG---RDKLERIYADVFGAEDA-LVRPQFV--SGTHAIALALFGVLRPGD   97 (403)
T ss_dssp             HHHHHHHHHTT--GGGCS---TT----TT-HH---HHHHHHHHHHHCT-SEE-EEETTS---SHHHHHHHHHHHH--TT-
T ss_pred             HHHHHHHHHcCCChhhcCCCCcCC---CCCcc---HHHHHHHHHHHhCchhh-hhccccc--chHHHHHHHHHhcCCCCC
Confidence            3688888875 3332222222211   12222   34666888999999742 11  122  689999999999999999


Q ss_pred             cEEEEeCChhHHHHHHH----------HHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC
Q 043610          160 PVDYIVTGSWGDKAFKE----------AQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~----------a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      +.+.+. |..-+-+.+.          .+.+| .-..+++.+   .| .+|.+.++  +++++|+|+|.   -+.|...-
T Consensus        98 ~ll~~t-G~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~---dg-~~D~~~i~~~~~~~tk~v~IQ---RSrGYs~R  169 (403)
T PF06838_consen   98 ELLSIT-GKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTE---DG-TIDWEAIKKALKPNTKMVLIQ---RSRGYSWR  169 (403)
T ss_dssp             EEEESS-SS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-T---TS-SB-HHHHHHHHHTTEEEEEEE----S-TTSSS
T ss_pred             eEEEcC-CCchhhHHHHhCCCCCCCCChHHhCceeEEEeecC---CC-CcCHHHHHHhhccCceEEEEe---cCCCCCCC
Confidence            988654 4321111111          12335 444566543   34 47888887  78999999996   34455544


Q ss_pred             ------CCccc----c--CCCcEEEEeccCcCCCC---ccccccccEEEeCCCccc-c---CCccEEEEEcHHHHhccCC
Q 043610          227 ------EYPSA----K--NSTGILVADMSSNFCSK---PVDVTRFGVIYAGAQKNV-G---PSGVTIVIVRKDLLGNAQD  287 (430)
Q Consensus       227 ------ei~~~----~--~~g~~lvvD~a~s~G~~---~idl~~~d~~~~s~~K~~-g---p~G~g~l~v~~~~~~~~~~  287 (430)
                            +|.++    |  +++++++||-.+.--..   |.++- .|++++|+-|+. |   |.| |++..++++++++-.
T Consensus       170 ~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vG-ADl~aGSLIKNpGGgiAptG-GYIaGr~~lVe~~a~  247 (403)
T PF06838_consen  170 PSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEVG-ADLMAGSLIKNPGGGIAPTG-GYIAGRKDLVERAAY  247 (403)
T ss_dssp             ----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT--SEEEEETTSGGGTTT-SS--EEEEESHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccccc-hhheeccceeCCCCCccCcC-CEEechHHHHHHHHh
Confidence                  34442    2  88999999987664443   44442 389999999999 3   788 999999999987321


Q ss_pred             --CCCccccccchhhcCCCCCCc-c-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          288 --KTPLMLDYKIHDENNSLYNTP-P-CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       288 --~~p~~~~~~~~~~~~~~~~T~-~-~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                        ..|..-     .+-|.+.++. . ..+++.+.....             .-.+ ...+...+-+.+|+++.|...+.|
T Consensus       248 RLTaPGiG-----~e~G~t~~~~R~~~QGlFlAP~vV~-------------eAlK-gaif~A~~fe~lG~~v~P~~~~~R  308 (403)
T PF06838_consen  248 RLTAPGIG-----KEVGATLGTNRLMFQGLFLAPHVVG-------------EALK-GAIFAAALFEKLGFEVSPKPDDPR  308 (403)
T ss_dssp             HHS-TTTG-----GGSS--TTTHHHHHHHHHHHHHHHH-------------HHHH-HHHHHHHHHHHTT-EEES-TTS--
T ss_pred             hhcCCccc-----cccccCcchHHHHHhHHhhchHHHH-------------HHHH-HHHHHHHHHHHcCCcCCCCCCCCC
Confidence              122111     1222222111 0 112222211111             1111 122333333348999988666679


Q ss_pred             ccceEEEEcCCCchhHHHHHHHHHc
Q 043610          364 SFMNVPFTLEKSDLEAEFVKEAAKE  388 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~~~~~~L~~~  388 (430)
                      +..|.++.+.+.+.-.+|++...+.
T Consensus       309 ~DiIQai~l~~~e~l~~FC~~iQ~~  333 (403)
T PF06838_consen  309 SDIIQAIELGSPEKLIAFCQGIQAA  333 (403)
T ss_dssp             SSS-EEEE-SSHHHHHHHHHHHHHT
T ss_pred             CceEEEEECCCHHHHHHHHHHHHhc
Confidence            9988889887522111577666654

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=98.89  E-value=6.3e-10  Score=107.27  Aligned_cols=158  Identities=16%  Similarity=0.146  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH---HHHHHHHHhC-CceEEecCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD---KAFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~---~~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ..+++++.++++||.+.   .+|+ .+||.++..++..+++|++.|+...+.+...   ...  ....| ++..++... 
T Consensus        30 ~~~~l~~~i~~l~g~e~---a~f~-~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~--~~~~G~~~~~l~~~~-  102 (290)
T PF01212_consen   30 TTARLEERIAELFGKEA---ALFV-PSGTMANQLALRAHLRPGESVICADTAHIHFDETGAI--EELSGAKLIPLPSDD-  102 (290)
T ss_dssp             HHHHHHHHHHHHHTSSE---EEEE-SSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHH--HHHTTCEEEEEBECT-
T ss_pred             hHHHHHHHHHHHcCCCE---EEEe-CCCChHHHHHHHHHHhcCCceeccccceeeeeccchh--hHhcCcEEEECCCcc-
Confidence            34588899999999973   4676 5799999999999888898888765544321   111  12356 666665531 


Q ss_pred             CcCCCCCCccccc--c-C-----CCccEEEEeecCCC-ccccCC--CCcc---c-cCCCcEEEEecc---CcCCCCcccc
Q 043610          192 EKYTKIPNFDALE--Q-N-----PDAKYLHICANETI-HGVEFK--EYPS---A-KNSTGILVADMS---SNFCSKPVDV  253 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i-~-----~~~~lv~i~~~~t~-tG~~~p--ei~~---~-~~~g~~lvvD~a---~s~G~~~idl  253 (430)
                        .| .+++++|+  + .     +++++|++++..+. -|.+++  +|.+   + +++|+.+++|++   .+.......+
T Consensus       103 --~G-~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~  179 (290)
T PF01212_consen  103 --DG-KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSL  179 (290)
T ss_dssp             --GT-BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHH
T ss_pred             --cC-CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccH
Confidence              14 57888887  3 1     46889999876554 388888  5554   3 699999999997   2222222333


Q ss_pred             cc----ccEEEeCCCcccc-CCccEEEEEcHHHHhc
Q 043610          254 TR----FGVIYAGAQKNVG-PSGVTIVIVRKDLLGN  284 (430)
Q Consensus       254 ~~----~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~  284 (430)
                      ++    .|.+++|++|.+| |.| +++..++++++.
T Consensus       180 ~e~~~~~D~v~~~~tK~~g~~~G-avl~~~~~~i~~  214 (290)
T PF01212_consen  180 AEIAAGADSVSFGGTKNGGAPGG-AVLAGNKEFIAK  214 (290)
T ss_dssp             HHHHTTSSEEEEETTSTT-SSSE-EEEEESHHHHHH
T ss_pred             HHHhhhCCEEEEEEEcccccccc-eEEEechHHHHH
Confidence            33    3899999999997 666 999999998765

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PRK07036 hypothetical protein; Provisional

Probab=98.87  E-value=6.5e-07  Score=92.36  Aligned_cols=320  Identities=9%  Similarity=-0.022  Sum_probs=171.7

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--C---
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--C---  155 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~---  155 (430)
                      -+|.|.+++.+.+.+...  .+.+  ....   .+...++.+.|.+++..+-+ .++| ++||++|++.++.-.  .   
T Consensus        68 ~~p~v~~Ai~~q~~~~~~--~~~~--~~~~---~~~~~~lae~L~~~~p~~~~-~v~f-~~sGseAve~AlklAr~~~~~  138 (466)
T PRK07036         68 GREEMADAIADQARRLPY--YTPF--GDMT---NAPAAELAAKLAELAPGDLN-HVFL-TTGGSTAVDSALRFVHYYFNV  138 (466)
T ss_pred             CCHHHHHHHHHHHHhCcc--cccc--cccC---CHHHHHHHHHHHHhCCCCcC-EEEE-eCCchHHHHHHHHHHHHHHHh
Confidence            478999999988864210  0000  0001   12233555666666533222 5665 578999999776532  1   


Q ss_pred             -C-C-CCcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCC--CcCCCC-CC-----ccccc--c----
Q 043610          156 -T-P-NDPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKA--EKYTKI-PN-----FDALE--Q----  205 (430)
Q Consensus       156 -~-~-gd~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~--~~~g~~-~d-----~~~l~--i----  205 (430)
                       + + ..+|+.+..+|.|.-+.... ..+             .+..++....  ...+.. .+     .++++  +    
T Consensus       139 ~g~t~r~~Ii~~~~~YHG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  217 (466)
T PRK07036        139 RGRPAKKHIITRGDAYHGSTYLTAS-LTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLG  217 (466)
T ss_pred             cCCCCccEEEEEcCccCCccHhhhc-ccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcC
Confidence             1 2 24676666665553221111 011             1111221100  001100 00     11222  2    


Q ss_pred             CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccc-c----ccEEEeCCCcccc--
Q 043610          206 NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVT-R----FGVIYAGAQKNVG--  268 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~-~----~d~~~~s~~K~~g--  268 (430)
                      .+++.+|++--+....|++.|      ++.++ +++|+++|+|+++. +|-.  .+-.+ .    -|+++  ..|.+|  
T Consensus       218 ~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~gG  295 (466)
T PRK07036        218 ADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTSG  295 (466)
T ss_pred             CCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--EccccccC
Confidence            134666766656666788877      34554 58999999999974 5432  12122 1    25554  479883  


Q ss_pred             CCccEEEEEcHHHHhccCCC-CCc-cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          269 PSGVTIVIVRKDLLGNAQDK-TPL-MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       269 p~G~g~l~v~~~~~~~~~~~-~p~-~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                      ..=+|.+.+++++.+...+. .+. .+      ..+.++ +.|.....++.++|+.+.+.    .+.++.+++.+++++.
T Consensus       296 ~~Pi~av~~~~~i~~~~~~~~~~~~~~------~~~~T~-~gnpl~~aaa~a~Le~i~~~----~l~~~~~~~g~~l~~~  364 (466)
T PRK07036        296 YQPLGAVIISERLLDVISGPNAKGNVF------THGFTY-SGHPVACAAALKNIEIMERE----GLCEHVREVGPYFEER  364 (466)
T ss_pred             ccccEEEEEcHHHHHHHhcccCcCccc------ccCCCC-CCCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHH
Confidence            11168888899987754321 000 00      012232 34666788888899987642    4666777777777777


Q ss_pred             HHccCCceecCCCCCCCccceEEEEcCC-Cc----------hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610          347 IDGSNGFYKCPVEKSVRSFMNVPFTLEK-SD----------LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       347 l~~~~G~~~~~~~~~~rs~~iv~f~~~~-~~----------~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv  415 (430)
                      |.+.....++. +-..+. ..+.+.+.+ ..          ....+...+.++|++..+..   +.+|+++...+|++||
T Consensus       365 L~~l~~~~~v~-~vrG~G-l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---~~~~l~Ppl~it~~~i  439 (466)
T PRK07036        365 LASLRELPLVG-DVRGDH-LMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE---HLCVLSPPLIITRAQI  439 (466)
T ss_pred             HHHhccCCCEE-EEEeec-eEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC---CEEEEeCCCcCCHHHH
Confidence            76521111110 111112 233444421 00          11246777888999986421   3689998888899999


Q ss_pred             HHHHHHHHHHHHh
Q 043610          416 EKLVAFMKDFQAK  428 (430)
Q Consensus       416 ~~ll~~L~~~~~~  428 (430)
                      ++++++|.+.+.+
T Consensus       440 d~~~~~l~~al~~  452 (466)
T PRK07036        440 DEIVAILRAAIEE  452 (466)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887653

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=98.86  E-value=3.1e-06  Score=87.22  Aligned_cols=331  Identities=14%  Similarity=0.097  Sum_probs=173.9

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEe
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~  140 (430)
                      ..++.+.+..|-     +--+|+|.+++.+++.+-  ....  .....    .....++.+.|.+++... .++.++|++
T Consensus        56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~--~~~~--~~~~~----~~~~~~lAe~L~~~~p~~~~~~~~~f~~  127 (459)
T PRK06931         56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSG--LPLH--TLDLT----TPLKDAFSEYLLSLLPGQGKEYCLQFTG  127 (459)
T ss_pred             CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhh--cccc--ccccC----CHHHHHHHHHHHHhCCCccccceEEEeC
Confidence            344555565654     234789999999987531  0000  00001    123335556666666432 112455666


Q ss_pred             CcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHH--------h---C-CceEEecCCC--CcCCCC--CCccc
Q 043610          141 GGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQK--------F---C-NPQVIWSGKA--EKYTKI--PNFDA  202 (430)
Q Consensus       141 ~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~--------~---g-~~~~v~~~~~--~~~g~~--~d~~~  202 (430)
                      +||+||++.++.-.  ....++|+.+..+|.|....-....        +   . .+..++....  -+++..  .+.+.
T Consensus       128 ~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (459)
T PRK06931        128 PSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKA  207 (459)
T ss_pred             CCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHH
Confidence            78999999876642  2334567777766665421111100        0   0 1112221100  000100  01111


Q ss_pred             ----cc--cC------CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------cccccc
Q 043610          203 ----LE--QN------PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTR  255 (430)
Q Consensus       203 ----l~--i~------~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~  255 (430)
                          ++  +.      +++..|++=-.....|++.+      ++.++ +++|+++|+|+++. +|-.       ..++ .
T Consensus       208 ~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~  286 (459)
T PRK06931        208 LTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-E  286 (459)
T ss_pred             HHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-C
Confidence                11  11      23555555444555677766      34454 58999999999976 5421       1122 1


Q ss_pred             ccEEEeCCCccc--cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHH
Q 043610          256 FGVIYAGAQKNV--GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVE  333 (430)
Q Consensus       256 ~d~~~~s~~K~~--gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~  333 (430)
                      -|+++.  .|.+  |.| +|.+..++++ +...   +..        .+.++ +.|..+..++.+.|+.+.+.    .+.
T Consensus       287 PDivt~--gK~l~gG~P-i~av~~~~~~-~~~~---~~~--------~~~T~-~gnpla~aaala~L~~l~~~----~l~  346 (459)
T PRK06931        287 PDIIVM--SKAVGGGLP-LAVLGIKKEF-DAWQ---PGG--------HTGTF-RGNQLAMATGLTTLKILKEE----NLA  346 (459)
T ss_pred             CCEEEe--cccccCCcc-eeeeeeHHHH-hhcc---CCC--------CCCCC-CCCHHHHHHHHHHHHHHHhC----CHH
Confidence            266554  7888  322 5666667664 4321   111        11232 35667788888899987643    355


Q ss_pred             HHHHHHHHHHHHHHHccC-CceecCCCCCCCccceEEEEcCCC--------------chhHHHHHHHHHcCCeecCCCCC
Q 043610          334 KMNRKKAELLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLEKS--------------DLEAEFVKEAAKEKMVQLKGHRS  398 (430)
Q Consensus       334 ~~~~~l~~~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~--------------~~~~~~~~~L~~~Gi~~~~g~~~  398 (430)
                      ++.+++.+++++.|++.. ...++. +-.-+. ..+.+.+.+.              ....++...+.++|++..+....
T Consensus       347 ~~~~~~G~~l~~~L~~l~~~~~~i~-~vrG~G-lm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~  424 (459)
T PRK06931        347 QNAAERGEWLKAQLAELQKRYPCIG-NVRGRG-LMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRN  424 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeE-eEecCc-eEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCC
Confidence            666666666666666521 111110 111122 2233444210              11124667778899998643222


Q ss_pred             CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          399 VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       399 ~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...+|+.+....+++||++++++|.+.+++
T Consensus       425 ~~~l~~~Ppl~it~~eid~~~~~l~~~l~~  454 (459)
T PRK06931        425 GNVVRLLPPLLITQAECEEFIDRFEQALLA  454 (459)
T ss_pred             CCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence            346999999999999999999999998764

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.85  E-value=9.7e-07  Score=91.05  Aligned_cols=331  Identities=9%  Similarity=0.010  Sum_probs=179.3

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-     +--+|.|.+++.+++.+...  .+.  .....    +...++.+.|.+++..+-+ .++|+ +|
T Consensus        46 G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~--~~~--~~~~~----~~~~~lae~L~~~~p~~~~-~v~f~-~s  115 (466)
T PRK07030         46 GKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEH--VIL--AGFSH----EPVIELSERLVKITPPGLS-RCFYA-DN  115 (466)
T ss_pred             CCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCC--ccc--cccCC----HHHHHHHHHHHHhCCCCcC-EEEEe-CC
Confidence            44455555542     33478999999998865210  000  00111    2234556666666643223 66665 78


Q ss_pred             HHHHHHHHHhhc-------CCCC-CcEEEEeCChhHHHHHHHHHHh-CC-------------ceEEecCCC--CcCCCC-
Q 043610          143 ATTQFAAVPLNL-------CTPN-DPVDYIVTGSWGDKAFKEAQKF-CN-------------PQVIWSGKA--EKYTKI-  197 (430)
Q Consensus       143 aT~a~~~~~~sl-------~~~g-d~vl~~~~g~~~~~~~~~a~~~-g~-------------~~~v~~~~~--~~~g~~-  197 (430)
                      |++|++.++.-.       -.+| .+|+.+..++.|.-..  +... +.             +..++....  ..++.. 
T Consensus       116 GsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~g--a~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~  193 (466)
T PRK07030        116 GSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLA--AMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSW  193 (466)
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHH--HHhccCCccccccCCccCCCCEEcCCCCccccccCCCH
Confidence            999999776543       1123 4566666665553211  1111 11             111111100  000100 


Q ss_pred             -----CCccccc--cC---CCccEEEEee-cCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------cc
Q 043610          198 -----PNFDALE--QN---PDAKYLHICA-NETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PV  251 (430)
Q Consensus       198 -----~d~~~l~--i~---~~~~lv~i~~-~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~i  251 (430)
                           -++++++  +.   +++..|++-- +....|++.+      ++.++ +++|+++|+|+++. +|-.       ..
T Consensus       194 ~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~  273 (466)
T PRK07030        194 EEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQA  273 (466)
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhc
Confidence                 0112233  22   3455555543 3566688777      34554 58999999999975 5521       11


Q ss_pred             ccccccEEEeCCCcccc--C-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcC
Q 043610          252 DVTRFGVIYAGAQKNVG--P-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGG  328 (430)
Q Consensus       252 dl~~~d~~~~s~~K~~g--p-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g  328 (430)
                      ++ .-|+++.  .|.+|  . + +|.+.+++++.+......+. ..   ....+.++ +.|..+..++.++|+.+.+   
T Consensus       274 gv-~PDiv~~--gKgl~gG~~P-i~av~~~~ei~~~~~~~~~~-~~---~~~h~~T~-~gnpla~aaa~a~L~~i~~---  341 (466)
T PRK07030        274 GI-RPDFLCL--SKALTGGYLP-LAAVLTTDTVYQAFYDDYPT-LR---AFLHSHSY-TGNPLACAAALATLDIFEQ---  341 (466)
T ss_pred             CC-CCCEEee--ehhccCCccc-ceEEEecHHHHHHHhccccc-cc---ccccCCCC-CCCHHHHHHHHHHHHHHHh---
Confidence            22 1266665  78883  2 3 68888899887654211000 00   00012232 3466778888889998874   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC-Cc----------hhHHHHHHHHHcCCeecCCCC
Q 043610          329 LNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK-SD----------LEAEFVKEAAKEKMVQLKGHR  397 (430)
Q Consensus       329 ~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~-~~----------~~~~~~~~L~~~Gi~~~~g~~  397 (430)
                       +.+.++.+++.+++++.|++......+. +-..+. ..+.+.+.. ..          ...++.+.+.++|+++.+.  
T Consensus       342 -~~l~~~~~~~G~~l~~~L~~l~~~~~v~-~vrG~G-l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--  416 (466)
T PRK07030        342 -DNVIENNRALARRMAEATAHLADHPHVA-EVRQTG-MILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL--  416 (466)
T ss_pred             -cCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeEece-eEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec--
Confidence             2466777788888888887632111111 111122 223344421 10          0124777788899998642  


Q ss_pred             CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          398 SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       398 ~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       ...+|+.+...++++||+.+++.|++.++.
T Consensus       417 -g~~i~~~Ppl~it~~eid~~~~~l~~al~~  446 (466)
T PRK07030        417 -GSVVYFLPPYVITPEQIDFLAEVASEGIDI  446 (466)
T ss_pred             -CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence             136999988889999999999999998764

>PRK07480 putative aminotransferase; Validated

Probab=98.84  E-value=7.8e-07  Score=91.56  Aligned_cols=320  Identities=10%  Similarity=-0.000  Sum_probs=168.6

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--C--
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--C--  155 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~--  155 (430)
                      --.|.|.+++.+++.+....  +.+ ....    .....++.+.|++++...-+ .++|. +||++|++.++.-.  .  
T Consensus        66 h~~p~v~~Ai~~q~~~~~~~--~~~-~~~~----~~~~~~lae~L~~~~p~~~~-~v~f~-~SGseA~e~AlklAr~~~~  136 (456)
T PRK07480         66 YGRKELADAAARQMRELPYY--NTF-FKTT----HPPAIELAAKLAEVAPPGFN-HVFFT-NSGSEANDTVLRMVRHYWA  136 (456)
T ss_pred             CCCHHHHHHHHHHHHhcCCc--ccc-cccC----CHHHHHHHHHHHHhCCCCcC-EEEEe-CCcHHHHHHHHHHHHHHHH
Confidence            34789999999988642110  000 0011    13334566667777653333 67665 78999999876532  1  


Q ss_pred             --C-CC-CcEEEEeCChhHHHHHHHH--------HHhCC--ceEEecCCCCcCCC-----CCC-----ccccc--c----
Q 043610          156 --T-PN-DPVDYIVTGSWGDKAFKEA--------QKFCN--PQVIWSGKAEKYTK-----IPN-----FDALE--Q----  205 (430)
Q Consensus       156 --~-~g-d~vl~~~~g~~~~~~~~~a--------~~~g~--~~~v~~~~~~~~g~-----~~d-----~~~l~--i----  205 (430)
                        + +| .+|+.+..+|.|.-.....        +..+.  ..+.....+..+..     ..+     .++++  +    
T Consensus       137 ~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  216 (456)
T PRK07480        137 LKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELG  216 (456)
T ss_pred             hcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcC
Confidence              1 33 3566666555553211000        00110  00000110000000     000     12332  2    


Q ss_pred             CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCcccc--C
Q 043610          206 NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQKNVG--P  269 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K~~g--p  269 (430)
                      .+++.+|++--+....|++.+      ++.++ +++|+++|+|+++. +|-.  .+-.+.+    |++  ++.|.+|  .
T Consensus       217 ~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv--~~gK~l~gG~  294 (456)
T PRK07480        217 ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLM--TIAKGLTSGY  294 (456)
T ss_pred             CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCee--eeehhhccCC
Confidence            135666666555666688776      34554 58999999999984 6532  1111222    554  4489883  1


Q ss_pred             CccEEEEEcHHHHhccC-CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHHHHHHH
Q 043610          270 SGVTIVIVRKDLLGNAQ-DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN-RKKAELLYNVI  347 (430)
Q Consensus       270 ~G~g~l~v~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~-~~l~~~l~~~l  347 (430)
                      .=+|.+++++++.+... +..++        ..+.++ +-|..+..++.++|+.+.+.    .+.++. +++.+++++.|
T Consensus       295 ~Pi~av~~~~~i~~~~~~~~~~~--------~~~~T~-~gnpl~~Aaa~a~L~~l~~~----~l~~~~~~~~g~~l~~~l  361 (456)
T PRK07480        295 IPMGAVGVGDRVAEVLIEEGGEF--------NHGFTY-SGHPVAAAVALANLRILRDE----GIVERVRDDTGPYLQKRL  361 (456)
T ss_pred             ccceEEEEcHHHHHHHhcCCCCc--------ccCCCC-CcCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHH
Confidence            11677888888866531 10110        012232 45667888888899988743    344555 35556666666


Q ss_pred             HccCCceecCCCCCCCccceEEEEcC-CCc----------hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610          348 DGSNGFYKCPVEKSVRSFMNVPFTLE-KSD----------LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       348 ~~~~G~~~~~~~~~~rs~~iv~f~~~-~~~----------~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~  416 (430)
                      ++.....++. +-..+. ..+.+.+. +..          ....+...+.++|+++.+.   .+.+|+++....|++||+
T Consensus       362 ~~l~~~~~i~-~vrG~G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---~~~l~~~Ppl~it~~eid  436 (456)
T PRK07480        362 RELADHPLVG-EVRGVG-LVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV---GDRMIISPPLVITHAEID  436 (456)
T ss_pred             HHhhcCCCee-eEEeec-ceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec---CCEEEEECCCCCCHHHHH
Confidence            5421111110 111112 22334442 100          1124666778899998542   136999999889999999


Q ss_pred             HHHHHHHHHHHh
Q 043610          417 KLVAFMKDFQAK  428 (430)
Q Consensus       417 ~ll~~L~~~~~~  428 (430)
                      ++++.|.+.+++
T Consensus       437 ~~~~~l~~al~~  448 (456)
T PRK07480        437 ELVEKARKALDA  448 (456)
T ss_pred             HHHHHHHHHHHH
Confidence            999999988754

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=98.84  E-value=2.7e-06  Score=87.64  Aligned_cols=310  Identities=11%  Similarity=0.024  Sum_probs=169.5

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g  158 (430)
                      -+|.|.+++.+.+.+.... .+     ...   .+...++.+.|++++....+ .++| ++|+++|+++++.-.  ....
T Consensus        88 ~~p~v~~Ai~~ql~~~~~~-~~-----~~~---~~~~~~lae~L~~~~p~~~~-~v~f-~~sGseAve~AlklAr~~tgr  156 (459)
T PRK06082         88 GHPHVIEKVKEQMAKLPFS-PR-----RFT---NETAIECAEKLTEIAGGELN-RVLF-APGGTSAIGMALKLARHITGN  156 (459)
T ss_pred             CCHHHHHHHHHHHHhCCCc-cC-----ccC---CHHHHHHHHHHHHhCCCCCC-EEEE-CCCcHHHHHHHHHHHHHhcCC
Confidence            5789999999998753211 11     011   13344677777887753323 6666 588999999875532  2334


Q ss_pred             CcEEEEeCChhHHHHHHHHHHh-C-------------CceEEecCCC--CcCCCCCC------ccccc--cC--CCccEE
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKF-C-------------NPQVIWSGKA--EKYTKIPN------FDALE--QN--PDAKYL  212 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~-g-------------~~~~v~~~~~--~~~g~~~d------~~~l~--i~--~~~~lv  212 (430)
                      .+++.+..++.|.-.  .+... +             .+..++....  .++.. .+      ++.++  +.  +++.+|
T Consensus       157 ~~ii~~~~~yHG~t~--~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~i~~~~~vAav  233 (459)
T PRK06082        157 FKVVSLWDSFHGASL--DAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPD-ADGSDVHYADYLEYVIEKEGGIGAF  233 (459)
T ss_pred             CEEEEEeCCCcCccH--HHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCC-hhHHHHHHHHHHHHHHhcCCCEEEE
Confidence            677777766655321  11111 1             1111221100  00110 01      12244  32  345455


Q ss_pred             EEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------ccccccccEEEeCCCcccc--CCccEEE
Q 043610          213 HICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVTRFGVIYAGAQKNVG--PSGVTIV  275 (430)
Q Consensus       213 ~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~~~d~~~~s~~K~~g--p~G~g~l  275 (430)
                      ++--+.+. |...+      ++.++ +++|+++++|+++. +|--       ..++ .-|+++  ..|.+|  ..=+|.+
T Consensus       234 IvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG~~P~~av  309 (459)
T PRK06082        234 IAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLGGGLVPIAAM  309 (459)
T ss_pred             EECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--ecccccCCCCcceEE
Confidence            55333332 54444      34454 58999999999976 3321       1122 126665  689994  2116778


Q ss_pred             EEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-Cce
Q 043610          276 IVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFY  354 (430)
Q Consensus       276 ~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~  354 (430)
                      .+++++.+....  ...        . .++ ..|..+..++.++|+.+.++    .+.++.+++.+++++.|++.. .+.
T Consensus       310 ~~~~~i~~~~~~--~~~--------~-~T~-~gnpl~~aaa~a~L~~l~~~----~l~~~~~~~g~~l~~~L~~l~~~~~  373 (459)
T PRK06082        310 ITKDKYNTAAQI--SLG--------H-YTH-EKSPLGCAAALATIEVIEQE----GLLEKVKADSQFMRERLLEMKAKYP  373 (459)
T ss_pred             EEcHHHHhhccC--CCC--------C-CCC-CcCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            888876432210  000        0 122 34556677888889987642    466777777777777776531 111


Q ss_pred             ecCCCCCCCccceEEEEcCC-Cc-------hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          355 KCPVEKSVRSFMNVPFTLEK-SD-------LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~-~~-------~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ++. +-..+. ..+.+.+.. ..       ....+...+.++|++..+..  .+.+|+++-..++++||++++++|++.+
T Consensus       374 ~i~-~vrG~G-l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--~~~i~~~Ppl~it~~eid~~~~~l~~~l  449 (459)
T PRK06082        374 LIG-DVRGIG-LLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ--GNVIQLSPPLIITREELTQALAILEEAI  449 (459)
T ss_pred             Cee-eeeecc-ceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC--CCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence            111 111122 223444421 00       11246667778999876421  2469999988899999999999999877


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       450 ~~  451 (459)
T PRK06082        450 AK  451 (459)
T ss_pred             HH
Confidence            54

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.83  E-value=1.1e-07  Score=93.30  Aligned_cols=218  Identities=13%  Similarity=0.108  Sum_probs=131.6

Q ss_pred             CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      |-+.+.+++++++...+..+.+.     +..--.-.+.+.+..+.+.++.+.++.   .++++ ++.+.|+.+++.++..
T Consensus        35 G~s~~~~e~iea~~~~~~~~v~L-----e~~l~~g~~~~R~~~~~~~~~~~~~ae---a~~iv-nnn~aAVll~~~al~~  105 (395)
T COG1921          35 GRSLYSPEAIEAMKEAMRAPVEL-----ETDLKTGKRGARLTELAELLCGLTGAE---AAAIV-NNNAAAVLLTLNALAE  105 (395)
T ss_pred             CCccCCHHHHHHHHHHhccccee-----eeecccchhhHHHHHHHHHHhcccchh---heeeE-CCcHHHHHHHHhhhcc
Confidence            67889999999998877544322     111111222333334444444444443   45665 6788999988888865


Q ss_pred             CCCcEEEE----eC-ChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC--ccccCC-
Q 043610          157 PNDPVDYI----VT-GSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI--HGVEFK-  226 (430)
Q Consensus       157 ~gd~vl~~----~~-g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~--tG~~~p-  226 (430)
                       +.++++.    .. ++|..  -+..+..| ..++.+..   .+ .....+++  |++++++++-+|.++.  +|.+-- 
T Consensus       106 -~~EvVis~g~lV~gg~~~v--~d~~~~aG-~~l~EvG~---tn-~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~~~  177 (395)
T COG1921         106 -GKEVVVSRGELVEGGAFRV--PDIIRLAG-AKLVEVGT---TN-RTHLKDYELAINENTALLLKVHSSNYGFTGMLSEE  177 (395)
T ss_pred             -CCeEEEEccccccCCCCCh--hHHHHHcC-CEEEEecc---cC-cCCHHHHHHHhccCCeeEEEEeeccccccccccHH
Confidence             5455542    22 34432  23444445 33444432   22 34556665  8999999999987765  222222 


Q ss_pred             CCccc-cCCCcEEEEeccCcCCCC-cccccc-----ccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccch
Q 043610          227 EYPSA-KNSTGILVADMSSNFCSK-PVDVTR-----FGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIH  298 (430)
Q Consensus       227 ei~~~-~~~g~~lvvD~a~s~G~~-~idl~~-----~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~  298 (430)
                      ++.++ +++|+.+++|.++..... ..++..     .|++++|++|.+| |. .|+++.++++++.++. .|....+   
T Consensus       178 ~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~lq~-~~l~Ral---  252 (395)
T COG1921         178 ELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEKLQS-HPLKRAL---  252 (395)
T ss_pred             HHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechHHHHHHHHh-hhhhhhh---
Confidence            56666 799999999998854321 123332     3899999999995 87 5999999999987643 2211111   


Q ss_pred             hhcCCCCCCccHHHHHHHHHHHHHHH
Q 043610          299 DENNSLYNTPPCYCIYMCGLVFEYLL  324 (430)
Q Consensus       299 ~~~~~~~~T~~~~~~~a~~~al~~l~  324 (430)
                              ...-..++++..+|+...
T Consensus       253 --------rv~K~tla~l~~aLe~y~  270 (395)
T COG1921         253 --------RVDKETLAALEAALELYL  270 (395)
T ss_pred             --------hcCcHhHHHHHHHHHHHc
Confidence                    122246677888887654

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=98.82  E-value=9.6e-07  Score=85.85  Aligned_cols=283  Identities=14%  Similarity=0.171  Sum_probs=144.7

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH--HHHhhcC--CC--------CC--cEEEEeCChhHHHHHHHHHHh
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA--AVPLNLC--TP--------ND--PVDYIVTGSWGDKAFKEAQKF  180 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~--~~~~sl~--~~--------gd--~vl~~~~g~~~~~~~~~a~~~  180 (430)
                      +-+-++|+..++++|++++ +|++. |+++..+.  .+..+++  .+        .+  +.+...+||--|  +.+++.+
T Consensus        69 ~Gipe~r~l~a~llgv~~~-~viv~-gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRH--Fai~E~~  144 (425)
T PF12897_consen   69 DGIPEARELFAELLGVPPE-NVIVG-GNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRH--FAITEHF  144 (425)
T ss_dssp             S--HHHHHHHHHHHTS-GG-GEEE--SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHH--HHHHHHC
T ss_pred             CChHHHHHHHHHHhCCCHH-HEEEe-ccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHH--HHHHHhh
Confidence            4456899999999999987 77775 55554443  2222221  11        12  345567775433  4578899


Q ss_pred             C-CceEEecCCCCcCCCCCCccccc--c--CCCccEEEEe-ecCCCccccCC-CC----ccc--cCCCcEEEEeccCcCC
Q 043610          181 C-NPQVIWSGKAEKYTKIPNFDALE--Q--NPDAKYLHIC-ANETIHGVEFK-EY----PSA--KNSTGILVADMSSNFC  247 (430)
Q Consensus       181 g-~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~~lv~i~-~~~t~tG~~~p-ei----~~~--~~~g~~lvvD~a~s~G  247 (430)
                      | +...|+..+   .|  ||.|.++  +  ++..|.++.+ --+||||..+. |.    +.+  +.++..++.|-++.+-
T Consensus       145 Giemi~VpM~~---dG--PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vH  219 (425)
T PF12897_consen  145 GIEMIPVPMTE---DG--PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVH  219 (425)
T ss_dssp             T-EEEEEEEET---TE--E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-
T ss_pred             CcEEEecCCCC---CC--CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEe
Confidence            9 999998864   34  8999887  3  5677776654 45899999999 43    333  3789999999877655


Q ss_pred             CC----c----cccc----cc---c--EEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCcc
Q 043610          248 SK----P----VDVT----RF---G--VIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP  309 (430)
Q Consensus       248 ~~----~----idl~----~~---d--~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~  309 (430)
                      +.    +    +|+-    +.   |  +.++|.+|.- .-.|++|+..++.-++.+.+    .+...       . -.|+
T Consensus       220 hL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~----~~~~~-------t-Igpd  287 (425)
T PF12897_consen  220 HLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKK----HLSVQ-------T-IGPD  287 (425)
T ss_dssp             BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHH----HHHHH---------S---
T ss_pred             eccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHH----HhcCc-------e-eCcc
Confidence            54    1    1221    11   3  6789999977 46789999999887765322    11100       0 0122


Q ss_pred             HHHHHHHHHHHHHHHHh-cCHHHHHHHHHH--------HHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHH
Q 043610          310 CYCIYMCGLVFEYLLEL-GGLNEVEKMNRK--------KAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAE  380 (430)
Q Consensus       310 ~~~~~a~~~al~~l~~~-~g~~~v~~~~~~--------l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~  380 (430)
                      =..+..-.   +++.+. +|+.+--+++++        ..+.+.+.|.+..|+--.. .|  ....-++|.+.+ +...+
T Consensus       288 KvNQLRHv---rff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt-~P--~GGYFIsld~~~-G~Akr  360 (425)
T PF12897_consen  288 KVNQLRHV---RFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWT-KP--KGGYFISLDVLD-GTAKR  360 (425)
T ss_dssp             HHHHHHHH---HHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE------SBSS-EEEEEST-T-HHH
T ss_pred             HHHHHHHH---HHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEec-CC--CCceEEEEecCC-ChHHH
Confidence            22222222   233222 144333333333        2223444444112333332 22  233447788776 44447


Q ss_pred             HHHHHHHcCCeecC-CC------CC-CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          381 FVKEAAKEKMVQLK-GH------RS-VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       381 ~~~~L~~~Gi~~~~-g~------~~-~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +++..++.||...+ |.      .. ...|||++. +-+.+|++..++.+.-++
T Consensus       361 vV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~cv  413 (425)
T PF12897_consen  361 VVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFATCV  413 (425)
T ss_dssp             HHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHHHH
Confidence            99888999999655 31      11 336999998 556899998888776543

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.80  E-value=1.6e-07  Score=91.58  Aligned_cols=303  Identities=15%  Similarity=0.158  Sum_probs=178.3

Q ss_pred             HHHHHHHHHHHHHHHHhCCCCC-cEEEEEeCcHHHHHHHHHhhcCC--CC----------CcEEEEe-CChhHHHHHHHH
Q 043610          112 EFKSIIEKAESDLRALLNIPQE-YSVLFLQGGATTQFAAVPLNLCT--PN----------DPVDYIV-TGSWGDKAFKEA  177 (430)
Q Consensus       112 ~~~~~~~~~r~~la~l~g~~~~-~~vv~~~~gaT~a~~~~~~sl~~--~g----------d~vl~~~-~g~~~~~~~~~a  177 (430)
                      .|.-+-.++-+.+.++.|-+.+ +. +|.+||+...+.++..+-.+  |+          +-|++.. ..+|+..-....
T Consensus       138 vF~lmE~~vl~km~~ivGw~~~~Dg-If~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~  216 (510)
T KOG0629|consen  138 VFVLMEEEVLAKMREIVGWEEGGDG-IFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAF  216 (510)
T ss_pred             eEEeehHHHHHHHHHHhCCCCCCCc-eecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHH
Confidence            3433445666777788887652 24 55567777777766544211  21          2334332 235554221122


Q ss_pred             HHhC--CceEEecCCCCcCCCCCCccccc--c---CCC---ccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccC
Q 043610          178 QKFC--NPQVIWSGKAEKYTKIPNFDALE--Q---NPD---AKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSS  244 (430)
Q Consensus       178 ~~~g--~~~~v~~~~~~~~g~~~d~~~l~--i---~~~---~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~  244 (430)
                      ..+|  .+..|+..+   .|+ ..+++|+  |   ..+   +-+|..+...|..|..-|  .|+++ .+++.|++||++=
T Consensus       217 lg~gtd~c~~v~t~e---~Gk-m~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAw  292 (510)
T KOG0629|consen  217 LGLGTDHCIKVKTDE---RGK-MIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAW  292 (510)
T ss_pred             hccCCceeEEecccc---cCc-cchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeeccc
Confidence            2335  666666653   564 5678887  2   122   568888888999999888  67775 6899999999976


Q ss_pred             cCCCC-c------c-ccccccEEEeCCCcccc-CCccEEEEEcHH-HHhccCCCCCccc-c----ccchhhcC---CCCC
Q 043610          245 NFCSK-P------V-DVTRFGVIYAGAQKNVG-PSGVTIVIVRKD-LLGNAQDKTPLML-D----YKIHDENN---SLYN  306 (430)
Q Consensus       245 s~G~~-~------i-dl~~~d~~~~s~~K~~g-p~G~g~l~v~~~-~~~~~~~~~p~~~-~----~~~~~~~~---~~~~  306 (430)
                      .-|.+ +      + -++..|.+..++||+.| |--++....+++ ++++++.....|+ .    |....+.+   ..-|
T Consensus       293 GGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCG  372 (510)
T KOG0629|consen  293 GGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCG  372 (510)
T ss_pred             ccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcC
Confidence            54432 1      1 13445789999999997 877888777764 5666554333222 0    00000110   1112


Q ss_pred             -CccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----h---
Q 043610          307 -TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----L---  377 (430)
Q Consensus       307 -T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----~---  377 (430)
                       -.+++-++-...|=    ...|+++..++.-++++++++.|++..|+..+-...+.  ..+++|...+..     .   
T Consensus       373 Rh~D~FKlWlmwkaK----G~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe--~~nv~fw~vp~~lR~~~~~~e  446 (510)
T KOG0629|consen  373 RHVDVFKLWLMWKAK----GTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE--HVNVCFWYVPPSLRGWQENPE  446 (510)
T ss_pred             ccccHHHHHHHHHhc----ccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCc--eEEEeeccCchHhccCcccch
Confidence             23444333322221    13489999999999999999999997787776322122  356887643211     0   


Q ss_pred             --------hHHHHHHHHHcCCeecCCCC----CCCeeEEeecC-CCCHHHHHHHHHHHHHHH
Q 043610          378 --------EAEFVKEAAKEKMVQLKGHR----SVGGMRASIYN-AMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       378 --------~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~-~~t~edv~~ll~~L~~~~  426 (430)
                              .+.+..++.++|-... |+-    ....+|+.+.+ ..+++|++-+++.|.++-
T Consensus       447 ~~~rL~kVaPkIK~~Mm~~Gt~Mi-~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg  507 (510)
T KOG0629|consen  447 RDSRLVKVAPKIKERMMKKGTTMI-GYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG  507 (510)
T ss_pred             hhhHHHhhCcHHHHHHHhccceee-EecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence                    1113333444454432 221    23468988887 468999999999998764

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=98.80  E-value=6.3e-07  Score=91.71  Aligned_cols=316  Identities=11%  Similarity=0.067  Sum_probs=157.4

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-     +--+|.|.+++.+++.+...       ..+...    ...++.+.|.+++... + .+.|. +
T Consensus        46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-------~~~~~~----~~~~la~~l~~~~p~~-~-~v~f~-~  111 (431)
T PRK06209         46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN-------FTRPSA----IELDAAESFLELIDGA-D-MVKFC-K  111 (431)
T ss_pred             CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC-------CCCCCH----HHHHHHHHHHHhCCcc-c-eEEEe-c
Confidence            344445555543     23478999999998874210       111111    1124455666665322 2 66665 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEE-eCChhH-HHHHHHHH--HhCCce-EEecCCCCcCCCCCCccccc--cC---CCc
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYI-VTGSWG-DKAFKEAQ--KFCNPQ-VIWSGKAEKYTKIPNFDALE--QN---PDA  209 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~-~~g~~~-~~~~~~a~--~~g~~~-~v~~~~~~~~g~~~d~~~l~--i~---~~~  209 (430)
                      |||+|++.++.-.  .....+|+.+ ..++.+ ..|+.-..  ..+... .+....  .+. -.|+++++  +.   .++
T Consensus       112 sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~--~~~-~~d~~~l~~~l~~~~~~~  188 (431)
T PRK06209        112 NGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTV--TFR-YNDIASLEALFEDHPGRI  188 (431)
T ss_pred             CHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccc--ccC-CCCHHHHHHHHHhCCCCE
Confidence            8999999876632  2222344433 223322 11211000  001000 000000  010 12455565  32   234


Q ss_pred             cEEEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCCcc--ccc-----cccEEEeCCCcccc--CCccEE
Q 043610          210 KYLHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSKPV--DVT-----RFGVIYAGAQKNVG--PSGVTI  274 (430)
Q Consensus       210 ~lv~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~~i--dl~-----~~d~~~~s~~K~~g--p~G~g~  274 (430)
                      .+|++   |...|+..|     +|.++ +++|+++++|++|. |....  -..     .-|+  .+..|.+|  .+ +|.
T Consensus       189 aavi~---Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~gv~PDi--~t~gK~lggG~p-~~a  261 (431)
T PRK06209        189 ACVIL---EPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVPDL--SCFGKALGNGFA-VSA  261 (431)
T ss_pred             EEEEE---ccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHhCCCcce--eeehhhhcCCcc-cEE
Confidence            44443   667777444     34554 58999999999873 32111  011     1244  55689994  34 477


Q ss_pred             EEEcHHHHhccC--CC-CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-
Q 043610          275 VIVRKDLLGNAQ--DK-TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-  350 (430)
Q Consensus       275 l~v~~~~~~~~~--~~-~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-  350 (430)
                      +..++++.+...  .. .+..+-       .....++|...++++.++|+.+.++ +   +.++..++.+++++.|++. 
T Consensus       262 v~~~~~i~~~~~~~~~~~~~~~~-------~~~T~~~np~~~aaa~a~l~~i~~~-~---~~~~~~~~g~~l~~~L~~~~  330 (431)
T PRK06209        262 LAGKREYMELGGLEHTDRERVFL-------LSTTHGAETHALAAAIATMAIYRDE-D---VIERLHEQGAKLAAGVNEAA  330 (431)
T ss_pred             EEEHHHHHhhhcccccCCCCcee-------eccCCCCCHHHHHHHHHHHHHHhcc-C---HHHHHHHHHHHHHHHHHHHH
Confidence            778888876411  00 000000       0112356777888888999988743 3   3444445555555555431 


Q ss_pred             --CCceecCCCCCCCccceEEEEc-CC---Cch--hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          351 --NGFYKCPVEKSVRSFMNVPFTL-EK---SDL--EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       351 --~G~~~~~~~~~~rs~~iv~f~~-~~---~~~--~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                        .++... +.. .-+...+.+.. .+   ...  ...+.++|.++|+...       .++|+  ..+|++||++++++|
T Consensus       331 ~~~~~~~~-vr~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p-------~l~is--~~ht~~dId~~l~~l  399 (431)
T PRK06209        331 AEHGLQDH-VRV-SGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMP-------SLVVS--YAHGDADIERTIDAV  399 (431)
T ss_pred             HhCCCCeE-EEe-ecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcccc-------ccccc--ccCCHHHHHHHHHHH
Confidence              333211 000 00111122211 11   011  1146677888899752       25565  467999999999999


Q ss_pred             HHHHHh
Q 043610          423 KDFQAK  428 (430)
Q Consensus       423 ~~~~~~  428 (430)
                      ++.+..
T Consensus       400 ~~~l~~  405 (431)
T PRK06209        400 HGALGV  405 (431)
T ss_pred             HHHHHH
Confidence            988754

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.79  E-value=1.8e-06  Score=89.08  Aligned_cols=320  Identities=10%  Similarity=0.037  Sum_probs=174.2

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC----
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC----  155 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~----  155 (430)
                      --+|.|.+++.+++.+.... . .  .....    +...++.+.|++++...-+ .++|. +||++|++.++.-..    
T Consensus        72 h~~p~v~~Ai~~ql~~l~~~-~-~--~~~~~----~~~~~lae~L~~~~p~~~~-~v~f~-~SGseAve~AlklAr~~~~  141 (460)
T PRK06916         72 HQVPELDEAIREQLNKIAHS-T-L--LGLAN----VPSILLAEKLIEVVPEGLK-KVFYS-DSGATAVEIAIKMAFQYWQ  141 (460)
T ss_pred             CCCHHHHHHHHHHHHhCCCc-c-c--cccCC----HHHHHHHHHHHHhCCCCCC-EEEEe-CCcHHHHHHHHHHHHHHHH
Confidence            45889999999998752110 0 0  00111    2234566667777643223 66665 789999997755321    


Q ss_pred             ---CC-CCcEEEEeCChhHHHHHHHHHHh-C-------------CceEEecCCC--CcCCCCC------Cccccc--cC-
Q 043610          156 ---TP-NDPVDYIVTGSWGDKAFKEAQKF-C-------------NPQVIWSGKA--EKYTKIP------NFDALE--QN-  206 (430)
Q Consensus       156 ---~~-gd~vl~~~~g~~~~~~~~~a~~~-g-------------~~~~v~~~~~--~~~g~~~------d~~~l~--i~-  206 (430)
                         .+ ..+|+.+..+|.|.-.  -+... +             .+..++....  .+++..+      ++++++  +. 
T Consensus       142 ~~g~tgr~~ii~~~~~YHG~t~--~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~  219 (460)
T PRK06916        142 NKGKPKKQRFVTLKNAYHGDTI--GAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE  219 (460)
T ss_pred             hcCCCCCcEEEEECCcCCcccH--HhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh
Confidence               13 3467777766666321  11111 1             1111211100  0000000      122333  22 


Q ss_pred             --CCccEEEEee-cCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c-----cccccccEEEeCCCcccc
Q 043610          207 --PDAKYLHICA-NETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P-----VDVTRFGVIYAGAQKNVG  268 (430)
Q Consensus       207 --~~~~lv~i~~-~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~-----idl~~~d~~~~s~~K~~g  268 (430)
                        +++.+|++-- +....|++.+      ++.++ +++|+++|+|+++. +|-.  .     .++ .-|+++  ..|.+|
T Consensus       220 ~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~--~gK~l~  296 (460)
T PRK06916        220 KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMT--AGKGLT  296 (460)
T ss_pred             CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeee--eehhhh
Confidence              3455555543 3566688776      34444 58999999999975 4421  1     112 126654  588883


Q ss_pred             --CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          269 --PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       269 --p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                        ..-+|.+.+++++.+...+...   ... ....+.++ +.|.....++.++|+.+.+.    .+.++.+++.+++++.
T Consensus       297 gG~~Pi~av~~~~ei~~~~~~~~~---~~~-~~~~~~T~-~gnpl~~aaa~a~l~~l~~~----~l~~~~~~~g~~l~~~  367 (460)
T PRK06916        297 GGYLPIAITVTTDEIYNAFYGDYE---EQK-TFFHGHSY-TGNPLGCAVALANLELYEKT----NLIEQVARKTEYVATQ  367 (460)
T ss_pred             cCccccceeeecHHHHHHhhcccc---ccC-ccccCCCC-CCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHH
Confidence              2127888889888765321000   000 00011232 33666778888889887642    4667778888888888


Q ss_pred             HHccCCceecCCCCCCCccceEEEEcCC-Cc--------h--hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610          347 IDGSNGFYKCPVEKSVRSFMNVPFTLEK-SD--------L--EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       347 l~~~~G~~~~~~~~~~rs~~iv~f~~~~-~~--------~--~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv  415 (430)
                      |++......+. +-..+.. .+.+.+.+ ..        .  ..++...+.++|+++.+..   ..+|+.+...++++||
T Consensus       368 l~~l~~~~~v~-~vrG~Gl-m~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g---~~l~~~Ppl~it~~~i  442 (460)
T PRK06916        368 LEDLFALKHVG-DIRQLGL-MVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG---NTIVFMPPLASTIDEL  442 (460)
T ss_pred             HHHhhcCCCeE-EeecCCc-eeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC---CEEEEeCCcccCHHHH
Confidence            87632211110 1111222 23333321 00        0  1257777888999986521   3699998888999999


Q ss_pred             HHHHHHHHHHHHh
Q 043610          416 EKLVAFMKDFQAK  428 (430)
Q Consensus       416 ~~ll~~L~~~~~~  428 (430)
                      ++++++|++.+++
T Consensus       443 d~~~~~l~~~l~~  455 (460)
T PRK06916        443 DEMLRILYKAISD  455 (460)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998864

>PRK06148 hypothetical protein; Provisional

Probab=98.79  E-value=1.7e-06  Score=97.18  Aligned_cols=314  Identities=11%  Similarity=0.057  Sum_probs=172.0

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g  158 (430)
                      -.|.|.+++.+++.+...  .+.  .  ..    +...++.+.|++++..+-+ .+.| .+|||||++.++.-.  ....
T Consensus       639 ~hp~v~~Ai~~q~~~l~~--~~~--~--~~----~~~~~lAe~L~~~~p~~~~-~v~f-~nSGsEA~e~AlklAr~~tGr  706 (1013)
T PRK06148        639 AHPRVVAAAARQAARLNT--NTR--Y--LH----DAIVAYAERLTATLPDGLT-VAFF-VNSGSEANSLALRLARAHTGQ  706 (1013)
T ss_pred             CCHHHHHHHHHHHhhcCC--cCC--c--CC----HHHHHHHHHHHHhCCCCcC-EEEE-eCCcHHHHHHHHHHHHHhcCC
Confidence            478999999998865211  110  0  11    2233555666666543222 5555 478999999876543  2334


Q ss_pred             CcEEEEeCChhHHHH--HHH----HH-HhC-----CceEEecCCC--CcCCCCCCc-------cccc--c------CCCc
Q 043610          159 DPVDYIVTGSWGDKA--FKE----AQ-KFC-----NPQVIWSGKA--EKYTKIPNF-------DALE--Q------NPDA  209 (430)
Q Consensus       159 d~vl~~~~g~~~~~~--~~~----a~-~~g-----~~~~v~~~~~--~~~g~~~d~-------~~l~--i------~~~~  209 (430)
                      .+|+.+..++.|.-.  ...    .. ..+     .+..++....  .+++. .+.       +.++  +      ..++
T Consensus       707 ~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~~~i  785 (1013)
T PRK06148        707 RDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERW-PDAEHGRRFAESVAEQIAAMAAKGRGP  785 (1013)
T ss_pred             CeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCC-ChhhhHHHHHHHHHHHHHhhhccCCce
Confidence            567777766554311  000    00 011     1111111000  01110 010       1222  1      1345


Q ss_pred             cEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC---cccccc----ccEEEeCCCcccc--CCcc
Q 043610          210 KYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK---PVDVTR----FGVIYAGAQKNVG--PSGV  272 (430)
Q Consensus       210 ~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~---~idl~~----~d~~~~s~~K~~g--p~G~  272 (430)
                      ..|++=-+....|++.+      ++.++ +++|+++|+|++|. +|-.   .+-.+.    -|+++.  .|.+|  .+ +
T Consensus       786 AAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~--gK~lggG~P-l  862 (1013)
T PRK06148        786 AFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTM--GKPIGNGHP-M  862 (1013)
T ss_pred             EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeee--cccccCCcc-e
Confidence            55655445555677776      34454 68999999999984 5422   111121    266544  89994  22 7


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-  351 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-  351 (430)
                      |.+++++++.+...+..          ..++++ .-|..+..++.++|+.+.+    +.+.++.+++.++++++|++.. 
T Consensus       863 gav~~~~ei~~~~~~g~----------~~~~Tf-~gnpla~aaa~a~L~~i~~----e~l~~~~~~~G~~l~~~L~~l~~  927 (1013)
T PRK06148        863 GAVVTTREIADSFDNGM----------EYFNTF-GGNPVSCAIGLAVLDIIED----EDLQRNALEIGNYLLAGLRELQD  927 (1013)
T ss_pred             EEEEEcHHHHhhccCCC----------ccccCC-CCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHH
Confidence            88888988876543210          011233 3455677778888998764    2466667777777777776521 


Q ss_pred             CceecCCCCCCCcc-ceEEEEcCC-C-------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSF-MNVPFTLEK-S-------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       352 G~~~~~~~~~~rs~-~iv~f~~~~-~-------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      .+.++   ...|.. ..+.+.+.. .       .....+.+.|.++||++.+.......+||.+...+|++||+++++.|
T Consensus       928 ~~~~i---~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l 1004 (1013)
T PRK06148        928 RFDII---GDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVL 1004 (1013)
T ss_pred             hCCCc---eEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHH
Confidence            11111   111211 123344321 0       01124777888899998642112347999999999999999999999


Q ss_pred             HHHHHh
Q 043610          423 KDFQAK  428 (430)
Q Consensus       423 ~~~~~~  428 (430)
                      ++.+++
T Consensus      1005 ~~~l~~ 1010 (1013)
T PRK06148       1005 DDVLAA 1010 (1013)
T ss_pred             HHHHHH
Confidence            998764

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=98.78  E-value=4.3e-06  Score=85.89  Aligned_cols=195  Identities=7%  Similarity=0.057  Sum_probs=115.9

Q ss_pred             CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC-------ccccc-cccEEEeCCCccccCC
Q 043610          207 PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK-------PVDVT-RFGVIYAGAQKNVGPS  270 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~-------~idl~-~~d~~~~s~~K~~gp~  270 (430)
                      +++..|++--+....|++.|      ++.++ +++|+++|+|+++. +|--       ..++. +-|+++  ..|.+|-.
T Consensus       250 ~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~g  327 (464)
T TIGR00699       250 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTA  327 (464)
T ss_pred             CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccC
Confidence            35667777666666788876      35554 58999999999975 4321       12343 346644  47888533


Q ss_pred             ccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          271 GVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       271 G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                      |  ++ ++.+.+.   +..+.+        .+.++ ..|..+..++.++|+.+.+.    .+.++.+++.+++++.|++.
T Consensus       328 G--~~-~~~~~~~---~~~~~~--------~~~T~-~gnp~~~aaa~a~L~~l~~~----~l~~~~~~~g~~l~~~L~~l  388 (464)
T TIGR00699       328 G--YF-FHDPAFR---PNKPYR--------QFNTW-MGDPSRALILREIIQEIKRK----DLLENVAHVGDYLYTGLEDL  388 (464)
T ss_pred             C--cc-ccchhcc---CCCCcc--------cccCC-CCCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHH
Confidence            3  33 2322211   101111        11232 35566777777888887642    45566666666666666652


Q ss_pred             C-Cce-ecC-CCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          351 N-GFY-KCP-VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       351 ~-G~~-~~~-~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      . .+. ++. +...-+. .++.+.+++......+.+.+.++|+++...  ....|||.+...++++||+.++++|.+.
T Consensus       389 ~~~~~~~i~~vRg~G~G-lm~gie~~~~~~~~~i~~~~~~~Gvl~~~~--g~~~ir~~Ppl~it~~eid~~~~~l~~~  463 (464)
T TIGR00699       389 QKKYPEFIQNLRGKGRG-TFIAWDTPDEAKRDKLLKKARNNGVNIGGC--GVKAIRLRPMLVFQKHHADIFLEIISKI  463 (464)
T ss_pred             HHhCCCceeeecccCeE-EEEEEecCCHHHHHHHHHHHHHCCcEEecC--CCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence            1 121 111 1100133 345666654222236888888999998542  1246999999999999999999999875

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=98.78  E-value=2e-06  Score=88.82  Aligned_cols=336  Identities=11%  Similarity=0.015  Sum_probs=174.2

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC----CCcEEE
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP----QEYSVL  137 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~----~~~~vv  137 (430)
                      ..++.+.+..|-     +--.|.|.+++.+.+.+... ...   .....    +...++.+.|.+++...    .-..|+
T Consensus        62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~-~~~---~~~~~----~~~~~lae~L~~~~p~~~~~~~~~~v~  133 (472)
T PRK08742         62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQ-VML---AGFTH----EPAVQLAEQLLAIAPRQDGRAPLSKVF  133 (472)
T ss_pred             CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCC-ccc---cccCC----HHHHHHHHHHHHhCCCcccCCCCCEEE
Confidence            344455555542     33578999999988764211 000   00111    22235556666665421    112666


Q ss_pred             EEeCcHHHHHHHHHhhcC-------CC-CCcEEEEeCChhHHHHHHHHH--------HhC----CceEEecCCCC--cCC
Q 043610          138 FLQGGATTQFAAVPLNLC-------TP-NDPVDYIVTGSWGDKAFKEAQ--------KFC----NPQVIWSGKAE--KYT  195 (430)
Q Consensus       138 ~~~~gaT~a~~~~~~sl~-------~~-gd~vl~~~~g~~~~~~~~~a~--------~~g----~~~~v~~~~~~--~~g  195 (430)
                      |. +||++|++.++.-..       ++ ..+|+.+..+|.|.-..-...        .++    .+..++.....  ..+
T Consensus       134 f~-~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~  212 (472)
T PRK08742        134 YA-DNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPG  212 (472)
T ss_pred             Ee-CCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccC
Confidence            65 789999998765431       12 246777776665532110110        000    11122211000  001


Q ss_pred             CC------CCccccc--c---CCCccEEEEee-cCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccc
Q 043610          196 KI------PNFDALE--Q---NPDAKYLHICA-NETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDV  253 (430)
Q Consensus       196 ~~------~d~~~l~--i---~~~~~lv~i~~-~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl  253 (430)
                      ..      .+++.++  +   .+++..|++-- .....|++.+      ++.++ +++|+++|+|+++. +|--  .+-.
T Consensus       213 ~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~  292 (472)
T PRK08742        213 QSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFAC  292 (472)
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHH
Confidence            00      0122333  2   13455555533 2456688766      34554 58999999999976 5531  1111


Q ss_pred             cc----ccEEEeCCCcccc--CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhc
Q 043610          254 TR----FGVIYAGAQKNVG--PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELG  327 (430)
Q Consensus       254 ~~----~d~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~  327 (430)
                      +.    -|+++.  .|.+|  ..=+|.+++++++.+......+    .. ....+.++ +.|..+.+++.++|+.+.++ 
T Consensus       293 e~~gv~PDiv~~--gKgl~gG~~Plaav~~~~ei~~~~~~~~~----~~-~~~h~~T~-~gnpl~~Aaa~a~L~~i~~~-  363 (472)
T PRK08742        293 EQAGVMPDLLCL--SKGLTGGFLPLSAVLATQQLYDAFLDDSR----ER-AFLHSHSY-TGNPLACAAALATLDIFADD-  363 (472)
T ss_pred             HhcCCCCCEEEE--cccccCCCCCcceeeccHHHHHHhhccCc----cC-ccCcCCCC-CccHHHHHHHHHHHHHHHHC-
Confidence            11    266655  78883  2116788889888765321100    00 00011232 34666788888889987743 


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC-Cc--------h--hHHHHHHHHHcCCeecCCC
Q 043610          328 GLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK-SD--------L--EAEFVKEAAKEKMVQLKGH  396 (430)
Q Consensus       328 g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~-~~--------~--~~~~~~~L~~~Gi~~~~g~  396 (430)
                         .+.++.+++.+++++.+.....+..+. +-..+. ..+.+.+.. ..        .  ...+.+++.++|+++.+. 
T Consensus       364 ---~l~~~~~~~g~~l~~~~~~~~~~~~i~-dvRG~G-l~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-  437 (472)
T PRK08742        364 ---DVIARNQPTAARMTQLAAQIGEHPHVA-DVRQAG-MVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL-  437 (472)
T ss_pred             ---CHHHHHHHHHHHHHHHHHHHhcCCCee-eEeccc-eEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec-
Confidence               345555555666665554321121111 111122 223344421 00        0  124667778899998642 


Q ss_pred             CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          397 RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       397 ~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                        .+.|||.+-...+++||+.+++.|++.++.
T Consensus       438 --g~vi~~~PpL~it~~ei~~~~~~l~~~l~~  467 (472)
T PRK08742        438 --GDVLYWMPPYCVDEAQLALLADTTRHAIDE  467 (472)
T ss_pred             --CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence              147999999999999999999999998764

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.77  E-value=1.4e-06  Score=87.44  Aligned_cols=288  Identities=15%  Similarity=0.143  Sum_probs=145.8

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-C--CCCCcEEEEeCChhHHHHHH--HHHHhC-Cc
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-C--TPNDPVDYIVTGSWGDKAFK--EAQKFC-NP  183 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~--~~gd~vl~~~~g~~~~~~~~--~a~~~g-~~  183 (430)
                      ++...+.+-+....++++.|.+-- + .-+..++|.+-++++++. .  +.+++|++...-+..++..-  .+...| ++
T Consensus       105 sQG~Lq~lfe~Qs~i~eLTGmdva-N-aSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~i  182 (429)
T PF02347_consen  105 SQGRLQALFEYQSMICELTGMDVA-N-ASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEI  182 (429)
T ss_dssp             BHHHHHHHHHHHHHHHHHHTSSEE---SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCcc-C-CCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEE
Confidence            567788888999999999999741 1 123456777777776654 2  22357776655454443211  122235 55


Q ss_pred             eEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEecc--CcCCCCccccccc--
Q 043610          184 QVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMS--SNFCSKPVDVTRF--  256 (430)
Q Consensus       184 ~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a--~s~G~~~idl~~~--  256 (430)
                      +.++..+   .+ ..|      ++++..|++.++++ .|.+-|  +|+++ +++|+++++ ++  -+++.+. .-.++  
T Consensus       183 v~~~~~~---~~-~~d------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~-~Pge~GA  249 (429)
T PF02347_consen  183 VEVPLDE---DG-TTD------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADPNALGGLK-SPGEYGA  249 (429)
T ss_dssp             EEE-BBT---TC-SB-------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC---GGGGT-
T ss_pred             EEecccc---cC-Ccc------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcC-ChhhcCc
Confidence            5554432   22 122      57888999988665 699999  77776 788998887 54  2334331 12333  


Q ss_pred             cEEEeCCCcccc-CCc-----cEEEEEcHHHHhccCCCC----------C-ccccc--cc-hhhc---CCCCCCccHHHH
Q 043610          257 GVIYAGAQKNVG-PSG-----VTIVIVRKDLLGNAQDKT----------P-LMLDY--KI-HDEN---NSLYNTPPCYCI  313 (430)
Q Consensus       257 d~~~~s~~K~~g-p~G-----~g~l~v~~~~~~~~~~~~----------p-~~~~~--~~-~~~~---~~~~~T~~~~~~  313 (430)
                      |++++. ||-|| |.|     +|++.++++++..+....          + +.+-.  +. ++..   .+...|-.....
T Consensus       250 DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A  328 (429)
T PF02347_consen  250 DIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLA  328 (429)
T ss_dssp             SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHH
T ss_pred             cEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHH
Confidence            777555 88786 644     899999999776542110          0 00000  00 1111   111122222222


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCee
Q 043610          314 YMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQ  392 (430)
Q Consensus       314 ~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~  392 (430)
                      ..+...+.++-. .|+.++.+++..+++++.+.|.+..++.+   .....-.  +.+...+ .... ++.+++...|+..
T Consensus       329 ~~a~~Yl~~~G~-~GL~~iA~~~~~~A~yl~~~L~~~~~~~~---~~~~f~e--~v~~~~~-~~~~~~l~~~~~~~gl~~  401 (429)
T PF02347_consen  329 LAAAIYLAYLGP-EGLREIAERIHLNAHYLAERLKKIYGLPF---DNPFFFE--FVVVFSK-DKEVEELLKRGIEGGLNL  401 (429)
T ss_dssp             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCTTBECS---SSSSBSS--EEEEESS--HHHHHHHHTT----EEE
T ss_pred             HHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHHHhcCccc---CCCCcee--eeeecCC-cHHHHHHHHHHHhcCCCc
Confidence            223334455553 48999999999999999999997423221   2222222  2222222 1111 2333333345222


Q ss_pred             cCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          393 LKGHRSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       393 ~~g~~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                        .....+.+-|++.=.++++|||+++++|
T Consensus       402 --~~~~~~~~li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  402 --RYPDDGALLICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             --GGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred             --cccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence              1223446888888788999999999875

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>PRK07481 hypothetical protein; Provisional

Probab=98.77  E-value=5.8e-06  Score=85.02  Aligned_cols=321  Identities=9%  Similarity=0.012  Sum_probs=171.7

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-----
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-----  155 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-----  155 (430)
                      -.|.|.+++.+++.+.....  .+ .....    +...++.+.|.++++-+.-..++|. +||+||++.++.-..     
T Consensus        59 ~~p~v~~Ai~~ql~~~~~~~--~~-~~~~~----~~~~~lae~L~~~~~~~~~~~v~f~-~sGsEAve~AlklAr~~~~~  130 (449)
T PRK07481         59 NREEVKEAIVRQLDELEYYS--TF-DGTTH----PRAIELSYELIDMFAPEGMRRVFFS-SGGSDSVETALKLARQYWKV  130 (449)
T ss_pred             CCHHHHHHHHHHHHhcccee--cc-cccCC----HHHHHHHHHHHHhcCCCCCCEEEEc-CchHHHHHHHHHHHHHHHHh
Confidence            47889999999886521100  00 00111    2234566667777642221266664 789999997765321     


Q ss_pred             --CCC-CcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCC--CcCCCCCCccc--------cc--c--
Q 043610          156 --TPN-DPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKA--EKYTKIPNFDA--------LE--Q--  205 (430)
Q Consensus       156 --~~g-d~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~--~~~g~~~d~~~--------l~--i--  205 (430)
                        ++| .+|+.+..++.|....... ..+             .+..++....  .+++. .|.++        ++  +  
T Consensus       131 ~g~~~r~~ii~~~~~yHG~t~ga~s-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~le~~i~~  208 (449)
T PRK07481        131 RGQPERTKFISLKQGYHGTHFGGAS-VNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTE-QDPEELARICARLLEREIAF  208 (449)
T ss_pred             cCCCCCcEEEEECCCcCCcchhhhc-cCCCcccccccCCCCCCCEEeCCCcccccccCC-CCHHHHHHHHHHHHHHHHHh
Confidence              133 4577777666553210000 001             1111111100  00110 02222        12  1  


Q ss_pred             --CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc----ccEEEeCCCcccc-
Q 043610          206 --NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR----FGVIYAGAQKNVG-  268 (430)
Q Consensus       206 --~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~----~d~~~~s~~K~~g-  268 (430)
                        .+++.+|++--+....|++.+      ++.++ +++|+++|+|+++. +|-.  .+-.+.    -|+++.  .|.+| 
T Consensus       209 ~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~g  286 (449)
T PRK07481        209 QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCL--AKGITS  286 (449)
T ss_pred             cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEE--eecccC
Confidence              145667777656666788776      34454 58999999999976 5421  111111    266554  78883 


Q ss_pred             -C-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          269 -P-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       269 -p-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                       . | +|.+.+++++.+...+....    ......+.++ +.|..+..++.++|+.+.+    +.+.++.+++.+++++.
T Consensus       287 G~~P-i~av~~~~~i~~~~~~~~~~----~~~~~h~~T~-~gnpl~~aaa~a~L~~l~~----~~l~~~~~~~g~~l~~~  356 (449)
T PRK07481        287 GYVP-LGATMVNARIADAFEANADF----GGAIMHGYTY-SGHPVACAAALATLDIVVR----EDLPANAAKRGAYLLEG  356 (449)
T ss_pred             CCcC-ceEEEEcHHHHHHHhccCcc----ccccccCCCC-CCCHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHH
Confidence             1 3 68888898887654321000    0000111222 3456677888888987764    34566666777777777


Q ss_pred             HHccC-CceecCCCCCCCccceEEEEcCC-C----------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHH
Q 043610          347 IDGSN-GFYKCPVEKSVRSFMNVPFTLEK-S----------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAG  414 (430)
Q Consensus       347 l~~~~-G~~~~~~~~~~rs~~iv~f~~~~-~----------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~ed  414 (430)
                      |++.. .+.++. +-..+. ..+.+.+.. .          ....++...+.++|+++.+..   ..+|+++...+|++|
T Consensus       357 L~~l~~~~~~i~-~vrG~G-lm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g---~~i~l~Ppl~it~~e  431 (449)
T PRK07481        357 LQPLKERFELVG-DVRGKG-LMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG---TKIILSPPLVIQRED  431 (449)
T ss_pred             HHHHhhcCCCeE-EEeecc-eEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC---CEEEEECCCCCCHHH
Confidence            76521 121110 111122 223344421 0          011246677888999986531   258999888889999


Q ss_pred             HHHHHHHHHHHHHh
Q 043610          415 VEKLVAFMKDFQAK  428 (430)
Q Consensus       415 v~~ll~~L~~~~~~  428 (430)
                      ||+++++|++.+++
T Consensus       432 id~~~~~l~~~l~~  445 (449)
T PRK07481        432 VDRIVDALDAGLSA  445 (449)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998864

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.76  E-value=7e-07  Score=86.34  Aligned_cols=327  Identities=15%  Similarity=0.135  Sum_probs=190.8

Q ss_pred             cccCCCCCceeecCCC---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEE
Q 043610           63 IQSGQEDRVFNFAAGP---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFL  139 (430)
Q Consensus        63 ~~~~~~~~~~l~~~gp---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~  139 (430)
                      ..+..+++++||...-   ..-.+++++.....+.++ |-|.=.. .+.+  ...+..-..++.|++++|+++  .++. 
T Consensus        88 ~~~i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrky-GvGsCGP-rGFY--Gt~DvHldlE~~iakF~G~E~--aivY-  160 (467)
T KOG1358|consen   88 HVTIDGKDVLNFASANFLGLIENEEIKEEASFTLRKY-GVGSCGP-RGFY--GTIDVHLDLEKRIAKFMGTED--AIVY-  160 (467)
T ss_pred             ceEecCceeecccchhhhhhcccHHHHHHHHHHHHHh-CCCCcCC-Cccc--ccceeecccHHHHHHhhCCcc--eeee-
Confidence            3456667788876643   234567888777777664 1221000 1111  113444578899999999986  4554 


Q ss_pred             eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHh-C-CceEEecCCCCcCCCCCCccccc-----------cC
Q 043610          140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-C-NPQVIWSGKAEKYTKIPNFDALE-----------QN  206 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~-g-~~~~v~~~~~~~~g~~~d~~~l~-----------i~  206 (430)
                       +-+-.++..++.++.+.||-+.+-+.-.|..   +..... . .+.+..-         .|.++++           -+
T Consensus       161 -s~gF~ti~S~ipafsKrGDIi~~de~~nfaI---q~GlqlSRS~i~~Fkh---------ndm~~lerll~E~~~~~~K~  227 (467)
T KOG1358|consen  161 -SYGFSTIESAIPAFSKRGDIIFVDEAVNFAI---QKGLQLSRSTISYFKH---------NDMEDLERLLPEQEDEDQKN  227 (467)
T ss_pred             -ccccchhhhcchhhhccCcEEEEehhhhHHH---HHHHhhhhheeEEecC---------CCHHHHHHhccCcchhhhhc
Confidence             4567788888888888898776544444542   111111 1 2222221         1222222           11


Q ss_pred             CC---c-cEEEEeecCCCccccCC--CCcccc-CCCcEEEEeccCcCCCC-----------ccccccccEEEeCCCcccc
Q 043610          207 PD---A-KYLHICANETIHGVEFK--EYPSAK-NSTGILVADMSSNFCSK-----------PVDVTRFGVIYAGAQKNVG  268 (430)
Q Consensus       207 ~~---~-~lv~i~~~~t~tG~~~p--ei~~~~-~~g~~lvvD~a~s~G~~-----------~idl~~~d~~~~s~~K~~g  268 (430)
                      |+   + +.|+.-..--++|.+.|  +|.+++ ++...+++|++.++|..           .++.++.|++++++.-.++
T Consensus       228 ~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala  307 (467)
T KOG1358|consen  228 PKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA  307 (467)
T ss_pred             cccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc
Confidence            22   2 34555455667899998  888884 78899999999888863           3567788999999988887


Q ss_pred             CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          269 PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       269 p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      ..| ||...+.-.++. +. ... ..|     -++. .+|+ ....++..++..+..+   ..+.+..++....+.+.+.
T Consensus       308 s~G-gFc~G~~~i~~h-Qr-LSg-~~Y-----~fSA-slPp-~la~aa~~ai~i~~~~---p~~~~~L~~k~~~~H~~l~  373 (467)
T KOG1358|consen  308 SGG-GFCAGKSFIADH-QR-LSG-SGY-----CFSA-SLPP-YLAGAAIKAILIEEWN---PEIVQPLRAKVAKFHAALS  373 (467)
T ss_pred             ccC-ceeecceeeEee-ee-ccc-cce-----eeec-cCch-hhhhhHHHHHHHHhhC---cchhhhhhccccccchhhh
Confidence            666 666664333221 10 000 000     0111 1333 3444555666644432   2366777777788888888


Q ss_pred             ccCCceecCCCCCCCccceEEEEcCCCc--hhH------HHHHHHHHcCCeecCCCC--------CCCeeEEeecCCCCH
Q 043610          349 GSNGFYKCPVEKSVRSFMNVPFTLEKSD--LEA------EFVKEAAKEKMVQLKGHR--------SVGGMRASIYNAMPL  412 (430)
Q Consensus       349 ~~~G~~~~~~~~~~rs~~iv~f~~~~~~--~~~------~~~~~L~~~Gi~~~~g~~--------~~g~iRis~~~~~t~  412 (430)
                      ...++.+.. ++  -|| ++-+.+.+..  .+.      +++.+...+|+.+....+        -...+||++...+++
T Consensus       374 ~~s~~~v~~-~~--~SP-i~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~se  449 (467)
T KOG1358|consen  374 SNSGFIVSG-SP--ESP-IIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSE  449 (467)
T ss_pred             cCCceEEec-Cc--CCc-eeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCH
Confidence            655666543 22  355 3444554311  111      244433334776543211        123799999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 043610          413 AGVEKLVAFMKDFQA  427 (430)
Q Consensus       413 edv~~ll~~L~~~~~  427 (430)
                      ||++++.+.|++...
T Consensus       450 eel~ra~~~ik~~~~  464 (467)
T KOG1358|consen  450 EELERAAELIKEVAS  464 (467)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998754

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=98.75  E-value=5.6e-07  Score=86.97  Aligned_cols=319  Identities=14%  Similarity=0.150  Sum_probs=178.2

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC----CCCcEEEEEeCcHHHHHHHHHhhcC-
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI----PQEYSVLFLQGGATTQFAAVPLNLC-  155 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~----~~~~~vv~~~~gaT~a~~~~~~sl~-  155 (430)
                      .|..+++.....+.+-.| ..+.|+.   +..    +.-+|+.+|+++-.    |.+-+-+++|+|++.|+..++.-++ 
T Consensus        87 fp~Dai~RA~~~L~~~gG-s~GaYS~---SqG----v~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~  158 (475)
T KOG0258|consen   87 FPTDAIKRAKRILNDCGG-SLGAYSD---SQG----VPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA  158 (475)
T ss_pred             CCHHHHHHHHHHHHhcCC-ccccccc---ccC----ChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc
Confidence            788899988888765433 2222222   222    33556666666653    3222335567899999999776665 


Q ss_pred             CCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc--cC-----CCccEEEEeecCCCccccCC--
Q 043610          156 TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QN-----PDAKYLHICANETIHGVEFK--  226 (430)
Q Consensus       156 ~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~-----~~~~lv~i~~~~t~tG~~~p--  226 (430)
                      .+++-|++..+.+.-+ ...++...+..+..-+++..+|+  .|.++|+  ++     =+++++++-++.||||.++.  
T Consensus       159 ~~~~GvliPiPQYPLY-sAti~l~~~~~v~YyLdEe~~W~--ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e  235 (475)
T KOG0258|consen  159 GKKTGVLIPIPQYPLY-SATISLLGGTQVPYYLDEESNWS--LDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEE  235 (475)
T ss_pred             CCCCceEeecCCCchh-HHHHHHhCCcccceeeccccCCC--CCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHH
Confidence            5778888877765433 23344334433333344444685  6888876  21     14788888899999999999  


Q ss_pred             CCccc----cCCCcEEEEeccC-----cCCCCccc-------cccc--c----EEEeCCCccc-c---CCccEEEEE---
Q 043610          227 EYPSA----KNSTGILVADMSS-----NFCSKPVD-------VTRF--G----VIYAGAQKNV-G---PSGVTIVIV---  277 (430)
Q Consensus       227 ei~~~----~~~g~~lvvD~a~-----s~G~~~id-------l~~~--d----~~~~s~~K~~-g---p~G~g~l~v---  277 (430)
                      -|.++    ++++++++.|+++     .-+..--.       +...  |    +-+.|.||.+ |   ++| |++=+   
T Consensus       236 ~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG-GYmEv~n~  314 (475)
T KOG0258|consen  236 NIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG-GYMESLNR  314 (475)
T ss_pred             HHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccC-CeeecccC
Confidence            24443    4889999999974     12211111       1111  2    4567788887 4   555 66532   


Q ss_pred             cHHHHhccCC-----CCCccccccchhh---cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          278 RKDLLGNAQD-----KTPLMLDYKIHDE---NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       278 ~~~~~~~~~~-----~~p~~~~~~~~~~---~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      .++..+.+-+     .+|...+- ...+   +.-.+|-+++          +...+  ..+.+.+..++.+..+++.+.+
T Consensus       315 ~prv~~qi~Kl~si~lc~~V~GQ-~~vdl~VnPP~Pgd~Sy----------~~~~~--Ekd~il~~l~~ra~l~~~~~ns  381 (475)
T KOG0258|consen  315 DPRVKQQIKKLASIKLCPQVSGQ-KLVDLVVNPPKPGDPSY----------DLFSS--EKDGILSSLRSRAKLTEDAFNS  381 (475)
T ss_pred             ChhHHHHHHHHHhhhhcCCccch-hhhceecCCCCCCCcch----------hhhhh--hhHhHHHHHHHHhHHHHHHHhh
Confidence            3444333211     12211100 0000   0111222222          21111  2467888888889999999998


Q ss_pred             cCCceecCCCCCCCccceEEEEcCCC--------chhH-HHH-HH-HHHcCCeecCCCCC---CC--eeEEeecCCCCHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEKS--------DLEA-EFV-KE-AAKEKMVQLKGHRS---VG--GMRASIYNAMPLA  413 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~~--------~~~~-~~~-~~-L~~~Gi~~~~g~~~---~g--~iRis~~~~~t~e  413 (430)
                      ..|+.+.++.....+-.-  +.+|..        +..+ .|. .+ |+..||++++|.+.   .|  .+|..+-.... +
T Consensus       382 ~~gi~cn~~qGAMY~fP~--i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~~-~  458 (475)
T KOG0258|consen  382 LEGISCNPVQGAMYLFPQ--ISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPGL-E  458 (475)
T ss_pred             cCceeeccCccceeeccc--ccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCchh-H
Confidence            778887653332222110  234421        1122 233 33 46679999997653   44  49999886443 5


Q ss_pred             HHHHHHHHHHHHHH
Q 043610          414 GVEKLVAFMKDFQA  427 (430)
Q Consensus       414 dv~~ll~~L~~~~~  427 (430)
                      -++++.++=+++..
T Consensus       459 ~i~~~~~fH~~f~~  472 (475)
T KOG0258|consen  459 IIEKFKKFHAEFMD  472 (475)
T ss_pred             HHHHHHHHHHHHHH
Confidence            56666666555544

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.69  E-value=5.9e-09  Score=101.32  Aligned_cols=192  Identities=16%  Similarity=0.174  Sum_probs=36.5

Q ss_pred             CCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC
Q 043610           76 AGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC  155 (430)
Q Consensus        76 ~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~  155 (430)
                      -|-+++++++++++.+....+.+.-... +.+.|+    .....+.+.++.+.|+.+   .+++ ++...|+.+++.++.
T Consensus        13 LGRs~l~~~a~~a~~~~a~~Y~nLE~dl-~~G~Rg----~R~~~v~~ll~~ltgAea---A~Vv-NnnaAAv~L~l~~la   83 (367)
T PF03841_consen   13 LGRSPLSEEAIEAVAEVASGYSNLEYDL-ETGKRG----SRYAHVEELLCELTGAEA---ALVV-NNNAAAVLLALNTLA   83 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccc-cccccc----cccccccccccccccccc---cccc-ccccccccccccccc
Confidence            3667899999999887654332221110 111222    224466788899999975   3444 566778887777774


Q ss_pred             CCCCcEEEEeCCh---hH--HHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC--ccccC
Q 043610          156 TPNDPVDYIVTGS---WG--DKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI--HGVEF  225 (430)
Q Consensus       156 ~~gd~vl~~~~g~---~~--~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~--tG~~~  225 (430)
                       +|.+|++.. |+   +|  .|..+..+..| +.+.|-..      ....+++++  |+++|.++.-.|.+|.  .|..-
T Consensus        84 -~~~EvIvsR-GelVeiGgsFRip~vm~~sGa~lvEVGtt------N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~  155 (367)
T PF03841_consen   84 -KGKEVIVSR-GELVEIGGSFRIPDVMRQSGARLVEVGTT------NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTG  155 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -ccccccccc-ccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccc
Confidence             577877543 22   12  13344455556 65555432      123456676  8999999999886665  33332


Q ss_pred             C----CCccc-cCCCcEEEEeccC---------cCCCCcccccc-----ccEEEeCCCcccc-CCccEEEEEcHHHHhcc
Q 043610          226 K----EYPSA-KNSTGILVADMSS---------NFCSKPVDVTR-----FGVIYAGAQKNVG-PSGVTIVIVRKDLLGNA  285 (430)
Q Consensus       226 p----ei~~~-~~~g~~lvvD~a~---------s~G~~~idl~~-----~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~  285 (430)
                      .    ++.++ +++++++++|..+         .+..+| ++.+     .|++++|+.|.+| |- .|+++.++++++++
T Consensus       156 ~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep-~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~lI~~l  233 (367)
T PF03841_consen  156 EVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEP-TVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKELIEKL  233 (367)
T ss_dssp             -----HHHHHHHHHT--EEEE-TTHHHHHHHTT-----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHHHHHHH
T ss_pred             cccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCcccc-HHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHHHHHHH
Confidence            2    56666 6899999999877         223333 3322     3899999999996 65 69999999999986


Q ss_pred             C
Q 043610          286 Q  286 (430)
Q Consensus       286 ~  286 (430)
                      +
T Consensus       234 k  234 (367)
T PF03841_consen  234 K  234 (367)
T ss_dssp             H
T ss_pred             h
Confidence            4

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=98.63  E-value=7.6e-06  Score=80.91  Aligned_cols=306  Identities=12%  Similarity=0.082  Sum_probs=171.7

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCC-------cEEEEEeCcHHHHHHHHHhhc-------CCCC-----------CcEEEE
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQE-------YSVLFLQGGATTQFAAVPLNL-------CTPN-----------DPVDYI  164 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~-------~~vv~~~~gaT~a~~~~~~sl-------~~~g-----------d~vl~~  164 (430)
                      +|...++..-.-++|+++++.|..       ...-+++++++++...++.+.       .+.+           +-|.|.
T Consensus       108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~  187 (511)
T KOG0628|consen  108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC  187 (511)
T ss_pred             CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence            566666666778899998887531       123345688888887665542       1222           123333


Q ss_pred             eCChhHHHHHHHHHHh-C-CceEEecCCCCcCCCCCCccccc--c----CCC-ccEEEEeecCCCccccCC---CCccc-
Q 043610          165 VTGSWGDKAFKEAQKF-C-NPQVIWSGKAEKYTKIPNFDALE--Q----NPD-AKYLHICANETIHGVEFK---EYPSA-  231 (430)
Q Consensus       165 ~~g~~~~~~~~~a~~~-g-~~~~v~~~~~~~~g~~~d~~~l~--i----~~~-~~lv~i~~~~t~tG~~~p---ei~~~-  231 (430)
                      ....  +..++.+... + +.+.++...  +++  .+.+.|.  +    ... +-.+++....|.+-..+|   ++..+ 
T Consensus       188 SDqa--hssveka~~i~~VklR~l~td~--n~~--mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc  261 (511)
T KOG0628|consen  188 SDQA--HSSVEKACLIAGVKLRALPTDE--NFG--MRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVC  261 (511)
T ss_pred             cCcc--cchHHHhHhhcceeEEEeeccc--CcC--CCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchh
Confidence            3222  2234444344 4 777777653  343  4555543  2    222 234444444444444566   56665 


Q ss_pred             cCCCcEEEEeccCcCCC---Cccc-----cccccEEEeCCCcccc-CCccEEEEEcHH-HHhccCCCCCccccccchhh-
Q 043610          232 KNSTGILVADMSSNFCS---KPVD-----VTRFGVIYAGAQKNVG-PSGVTIVIVRKD-LLGNAQDKTPLMLDYKIHDE-  300 (430)
Q Consensus       232 ~~~g~~lvvD~a~s~G~---~~id-----l~~~d~~~~s~~K~~g-p~G~g~l~v~~~-~~~~~~~~~p~~~~~~~~~~-  300 (430)
                      +++|+|++||++++-.+   ..++     ++..|-+-+..|||+- =--+.-||++++ .+.......|.|++...... 
T Consensus       262 ~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~  341 (511)
T KOG0628|consen  262 REEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSA  341 (511)
T ss_pred             hhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccC
Confidence            69999999999987322   2221     3334788999999994 334677888776 33322223444443211100 


Q ss_pred             cCCCC-CCccHHHHHHHHHHHH--HHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch
Q 043610          301 NNSLY-NTPPCYCIYMCGLVFE--YLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL  377 (430)
Q Consensus       301 ~~~~~-~T~~~~~~~a~~~al~--~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~  377 (430)
                      ...+. .-|=.-.+.++...+-  .+. .+++++-.+++.+|++.+.+.+.+-.-|++..  +  +--+.++|++++...
T Consensus       342 ~Dyrhwqipl~rRfRSLKlWfv~R~~G-ve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~--~--~~lgLvcFRlk~~N~  416 (511)
T KOG0628|consen  342 PDYRHWQIPLGRRFRSLKLWFVLRSYG-VENLQNYIREHVRLAKEFETLVRADPRFEIVN--K--RILGLVCFRLKGDNE  416 (511)
T ss_pred             CCccccccccccchhhHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhhcCCcceeec--c--cccceeEEeecCCcH
Confidence            00000 0111113455555443  222 22455566666778888888888756677752  2  333579999986432


Q ss_pred             hH-HHHHHHHHcCCee-cCCCCCCC--eeEEeecC-CCCHHHHHHHHHHHHHHHH
Q 043610          378 EA-EFVKEAAKEKMVQ-LKGHRSVG--GMRASIYN-AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       378 ~~-~~~~~L~~~Gi~~-~~g~~~~g--~iRis~~~-~~t~edv~~ll~~L~~~~~  427 (430)
                      .. ++.+++...|=+. .+-.. .|  .+|+.++. .++++||+..-+.|.+...
T Consensus       417 ~ne~Ll~~in~~g~i~l~~~~l-~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~  470 (511)
T KOG0628|consen  417 INEALLNRLNSSGRIHLVPASL-HGKFVLRFAVCSPLTNESDIDEAWKIIFEAAD  470 (511)
T ss_pred             HHHHHHHHHHhcCcEEEEEeee-cceEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Confidence            22 6888887775443 22111 12  49999887 4568999998888877654

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=98.61  E-value=4.8e-06  Score=83.69  Aligned_cols=330  Identities=11%  Similarity=0.041  Sum_probs=179.9

Q ss_pred             CCCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEe
Q 043610           68 EDRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQ  140 (430)
Q Consensus        68 ~~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~  140 (430)
                      ..+.|+++.+-      +--.+++.+++.+++.+..   ...+ .+....+    ..++.+.|+++..-. =+ .|+| +
T Consensus        42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~---~~~~-~~~t~~P----a~~LA~~L~~~aP~~~l~-~vFf-~  111 (449)
T COG0161          42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLP---HVMF-GGFTHEP----AIELAEKLAELAPEGGLD-HVFF-T  111 (449)
T ss_pred             CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCC---chhh-cccCCch----HHHHHHHHHHhCCCCCcc-EEEE-e
Confidence            34455554422      3347789999999886521   1100 1111112    336667777777732 33 6666 5


Q ss_pred             CcHHHHHHHHHhhcC-------CCCC-cEEEEeCChhHHHHHHH--------H-HHhC----CceEEecCCC---CcCCC
Q 043610          141 GGATTQFAAVPLNLC-------TPND-PVDYIVTGSWGDKAFKE--------A-QKFC----NPQVIWSGKA---EKYTK  196 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~-------~~gd-~vl~~~~g~~~~~~~~~--------a-~~~g----~~~~v~~~~~---~~~g~  196 (430)
                      +||++|++.++.-..       +|.. +++...++|.|.-+.-.        - ..+.    .+..++....   ...++
T Consensus       112 ~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~  191 (449)
T COG0161         112 DSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGE  191 (449)
T ss_pred             CCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCC
Confidence            889999997754421       2433 36666666655321100        0 0011    1112221110   00011


Q ss_pred             C-----CCccccc-----cCCCccEEEEee--cCCCccccCC------CCccc-cCCCcEEEEecc-CcCCCC--ccccc
Q 043610          197 I-----PNFDALE-----QNPDAKYLHICA--NETIHGVEFK------EYPSA-KNSTGILVADMS-SNFCSK--PVDVT  254 (430)
Q Consensus       197 ~-----~d~~~l~-----i~~~~~lv~i~~--~~t~tG~~~p------ei~~~-~~~g~~lvvD~a-~s~G~~--~idl~  254 (430)
                      -     -..++|+     ..|++-.-+|.-  +....|++.|      ++.++ +++|+++|+|++ -+||--  .+-.+
T Consensus       192 ~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e  271 (449)
T COG0161         192 GDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACE  271 (449)
T ss_pred             ChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhh
Confidence            1     1123444     233433333322  2444788888      35554 699999999997 456532  23333


Q ss_pred             cc----cEEEeCCCccc--cCCccEEEEEcHHHHhccCCC--CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          255 RF----GVIYAGAQKNV--GPSGVTIVIVRKDLLGNAQDK--TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       255 ~~----d~~~~s~~K~~--gp~G~g~l~v~~~~~~~~~~~--~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                      .+    |+++  ..|.+  |..=+|.+++++++.+.+...  ..++        .+.+ +|-|..+.+++.+.|+.+++ 
T Consensus       272 ~~gi~PDi~~--~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~--------HG~T-YsghPlacAaAla~L~i~e~-  339 (449)
T COG0161         272 HAGIVPDILC--LAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFM--------HGHT-YSGNPLACAAALANLDILEE-  339 (449)
T ss_pred             hcCCCCCeee--ecccccccchhhHhHhhhHHHHHHHhcccCCeec--------cCCc-cccCHHHHHHHHHHHHHHHh-
Confidence            33    5544  56888  322267788888887764321  1111        1223 35566667777778887764 


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCCCCCCcc-ceEEEEcCC-Cc-h-------hHHHHHHHHHcCCeecCC
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVEKSVRSF-MNVPFTLEK-SD-L-------EAEFVKEAAKEKMVQLKG  395 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~~~~rs~-~iv~f~~~~-~~-~-------~~~~~~~L~~~Gi~~~~g  395 (430)
                         +.+.++.+++..++.++|++ ..+...+.   +.|.- .+..+.+.. .+ .       ...+.+.+.++|+++.+.
T Consensus       340 ---e~l~~~~~~~~~~l~~~L~~~l~~~p~Vg---dVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~  413 (449)
T COG0161         340 ---EDLLERVAEIGAYLQAGLQAALADHPLVG---DVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL  413 (449)
T ss_pred             ---cCHHHHHHHHHHHHHHHHHHhcccCCcEE---EeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec
Confidence               45677777888888888886 22222221   12322 334444432 11 1       124666777899998764


Q ss_pred             CCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          396 HRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       396 ~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .   ..+=+++-...|++||+++++.+++.+++
T Consensus       414 g---~~i~~~PPliit~~eid~l~~~l~~al~~  443 (449)
T COG0161         414 G---DVIYLMPPLIITREEIDELVDALREALDE  443 (449)
T ss_pred             C---CEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence            1   14677777788999999999999998764

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.52  E-value=8.6e-06  Score=76.41  Aligned_cols=241  Identities=17%  Similarity=0.166  Sum_probs=137.6

Q ss_pred             HHHHHHHHHhCCCCC-cEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHH----------HHHhC-CceEE
Q 043610          119 KAESDLRALLNIPQE-YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKE----------AQKFC-NPQVI  186 (430)
Q Consensus       119 ~~r~~la~l~g~~~~-~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~----------a~~~g-~~~~v  186 (430)
                      .+.+-+|+.||+... =..-|+  |+|.|+.+++..+++|||+.+++. |..-+-+.+.          .+.+| .-+-+
T Consensus        69 tLe~vyA~vf~aE~a~VRpq~i--sGTHAI~~aLfg~LRpgDell~i~-G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v  145 (416)
T COG4100          69 TLERVYAQVFGAEAALVRPQII--SGTHAIACALFGILRPGDELLYIT-GSPYDTLEEVIGLRGEGQGSLKDFGIKYKAV  145 (416)
T ss_pred             HHHHHHHHHhccccceeeeeee--cchhHHHHHHHhccCCCCeEEEec-CCcchhHHHHhccCCCCcccHHHhCcceeec
Confidence            445677899998642 023344  579999999999999999999875 4332222111          12344 44445


Q ss_pred             ecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC------CCccc----c--CCCcEEEEeccCcCCC---C
Q 043610          187 WSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK------EYPSA----K--NSTGILVADMSSNFCS---K  249 (430)
Q Consensus       187 ~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p------ei~~~----~--~~g~~lvvD~a~s~G~---~  249 (430)
                      ++..   .| .+|.+.++  ++++||+|.|.-   +.|.-..      +|.++    +  ..+++++||-.+.--.   +
T Consensus       146 ~Lt~---~g-kiD~~~v~~~i~~~tkli~IQR---S~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~E  218 (416)
T COG4100         146 PLTA---DG-KIDIQAVKTAISDRTKLIGIQR---SKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKE  218 (416)
T ss_pred             cccc---CC-cccHHHHHHhcCccceEEEEEe---ccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccC
Confidence            5542   34 47887776  899999999963   4455443      34432    3  7889999998765333   3


Q ss_pred             ccccccccEEEeCCCcccc----CCccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH
Q 043610          250 PVDVTRFGVIYAGAQKNVG----PSGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL  323 (430)
Q Consensus       250 ~idl~~~d~~~~s~~K~~g----p~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l  323 (430)
                      |.++. .|++.+|.-|.-|    -.| |++..+.++++...=  ..|..             |+..-+.++.+.+.++-+
T Consensus       219 Pt~vG-aDliAGSLIKNpGGgiaktG-GYiaGk~~~ve~~~yRlTaPGI-------------G~e~Gat~~~l~~myqGl  283 (416)
T COG4100         219 PTHVG-ADLIAGSLIKNPGGGIAKTG-GYIAGKAELVEAAAYRLTAPGI-------------GREGGATLYSLREMYQGL  283 (416)
T ss_pred             ccccc-hhhhccceeeCCCCceeecc-ceeechHHHHHhhceeeecCCc-------------cccccccHHHHHHHHhhh
Confidence            44442 3789999999983    244 888899999886321  11211             122222333333333311


Q ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc
Q 043610          324 LELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE  388 (430)
Q Consensus       324 ~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~  388 (430)
                      .-   -..+.....+-+.+....+++ +|+...|.-.+.|...+-++.+.+.+.--+|++.+...
T Consensus       284 Fl---APhvv~qa~Kga~fta~~le~-lg~~~~P~~~~kRtDlIQavkf~~~eKmIaFcqaiQ~a  344 (416)
T COG4100         284 FL---APHVVSQAVKGAHFTARFLEK-LGFPVNPKYDAKRTDLIQAVKFGSKEKMIAFCQAIQAA  344 (416)
T ss_pred             cc---chHHHHHHhhhhHHHHHHHHH-cCCCCCCcccccccchhhheecCCHHHHHHHHHHHhhc
Confidence            10   012222222222333334443 78887764445566666666776422111466665543

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=98.45  E-value=1.3e-05  Score=80.55  Aligned_cols=287  Identities=10%  Similarity=0.069  Sum_probs=165.2

Q ss_pred             HHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC-CCCcEEE-------EeCChhHHHHHHHHHHhC-CceEEecC
Q 043610          119 KAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT-PNDPVDY-------IVTGSWGDKAFKEAQKFC-NPQVIWSG  189 (430)
Q Consensus       119 ~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~-~gd~vl~-------~~~g~~~~~~~~~a~~~g-~~~~v~~~  189 (430)
                      ++++.+++++|.+.   ++++ .+++.+...++..+++ |||++.+       ..+-+|-. ..-.+...| .++.+...
T Consensus        78 ~Lee~vael~G~E~---alpt-hqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fet-t~g~a~l~G~~~~~l~~~  152 (467)
T TIGR02617        78 ALAESVKNIFGYQY---TIPT-HQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDT-TQGHSQINGCTARNVYTK  152 (467)
T ss_pred             HHHHHHHHHhCCce---EEEC-CCCchHHHHHHHhhcccccccccccccccccceEEEEec-chHHHHHcCceeecccch
Confidence            67788899999873   4554 4668888888777777 5665441       12222221 001122345 44443211


Q ss_pred             C------CCcCCCCCCccccc--cCC----CccE--EEEeecCCCccccCC-----CCccc-cCCCcEEEEeccC----c
Q 043610          190 K------AEKYTKIPNFDALE--QNP----DAKY--LHICANETIHGVEFK-----EYPSA-KNSTGILVADMSS----N  245 (430)
Q Consensus       190 ~------~~~~g~~~d~~~l~--i~~----~~~l--v~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~----s  245 (430)
                      +      +.++...+|++.++  +.+    +...  ..+++ |+.-|...+     ++.++ +++|+.+++|++=    +
T Consensus       153 ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~-N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA  231 (467)
T TIGR02617       153 EAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITC-NSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENA  231 (467)
T ss_pred             hhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEE-ecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHh
Confidence            0      11232357888887  542    2222  23333 455688888     34454 6999999999952    1


Q ss_pred             C-------CCCcccc--------ccccEEEeCCCcccc-CCccEEEEEcHH----HHhccCCCCCccccccchhhcCCCC
Q 043610          246 F-------CSKPVDV--------TRFGVIYAGAQKNVG-PSGVTIVIVRKD----LLGNAQDKTPLMLDYKIHDENNSLY  305 (430)
Q Consensus       246 ~-------G~~~idl--------~~~d~~~~s~~K~~g-p~G~g~l~v~~~----~~~~~~~~~p~~~~~~~~~~~~~~~  305 (430)
                      .       +....++        +-.|.++.|+.|.+| |-| |++..+++    +.++++..+..+       +.+.+|
T Consensus       232 ~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~~~i~~-------EGf~tY  303 (467)
T TIGR02617       232 YFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQ-------EGFPTY  303 (467)
T ss_pred             hhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHhhcccc-------cCCcCc
Confidence            1       3333332        234899999999997 889 88888765    333443333322       233466


Q ss_pred             CCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEE------EEcCCCchhH
Q 043610          306 NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP------FTLEKSDLEA  379 (430)
Q Consensus       306 ~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~------f~~~~~~~~~  379 (430)
                      |..+.-.+-+++..|+...   ..+-+..|..+. ++|.+.|.+ .|+.+..  ..  ...++.      -.+|..+...
T Consensus       304 GGlagrd~ea~a~Gl~e~~---~~~yl~~ri~qv-~yl~~~L~~-~Gvpi~~--~G--ghav~iDa~~~lphip~~~fpa  374 (467)
T TIGR02617       304 GGLEGGAMERLAVGLYDGM---NLDWLAYRINQV-QYLVNGLEE-IGVVCQQ--AG--GHAAFVDAGKLLPHIPADQFPA  374 (467)
T ss_pred             CchhHHHHHHHHhhhhhcc---cHHHHHHHHHHH-HHHHHHHHh-CCCcEEe--cC--ccEEEEehhhhCCCCChhhCcH
Confidence            7777777777777776543   234455555444 688889886 7876642  11  111111      1133323333


Q ss_pred             -HHHHHHH-HcCCeecC-CC------------CC--CCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          380 -EFVKEAA-KEKMVQLK-GH------------RS--VGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       380 -~~~~~L~-~~Gi~~~~-g~------------~~--~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                       .+..+|. +.||..+. |.            ..  ..-+|+.+-- --|.+.+|-.+++|+.+.++
T Consensus       375 ~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~  441 (467)
T TIGR02617       375 HALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_pred             HHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence             5777774 45776321 11            01  2359999765 34788999999999987653

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=98.45  E-value=1e-05  Score=78.53  Aligned_cols=324  Identities=14%  Similarity=0.114  Sum_probs=171.1

Q ss_pred             CceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           70 RVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        70 ~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      +++.+..|-     +--.|.|.+++.+++...+.+-+ .    ...    ..+.+..+.|.+.+=.+-  .++|+++||+
T Consensus        51 ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~-~----~~~----~pi~~~Ae~L~s~~P~~l--~~vfF~nsGs  119 (442)
T KOG1404|consen   51 RYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTS-G----YLN----PPIHDLAEALVSKLPGDL--KVVFFVNSGS  119 (442)
T ss_pred             eeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeec-c----ccC----CcHHHHHHHHHHhCCCCc--eEEEEecCCc
Confidence            344455554     34578999999998865442211 1    111    223344455555554433  4566678999


Q ss_pred             HHHHHHHhhc-C-CCCCcEEEEeCChhHHHHHHHHHHhC-Cc----------eEEecCCCCcC----CCC-----CCc--
Q 043610          145 TQFAAVPLNL-C-TPNDPVDYIVTGSWGDKAFKEAQKFC-NP----------QVIWSGKAEKY----TKI-----PNF--  200 (430)
Q Consensus       145 ~a~~~~~~sl-~-~~gd~vl~~~~g~~~~~~~~~a~~~g-~~----------~~v~~~~~~~~----g~~-----~d~--  200 (430)
                      ||+++++.-. . .-.-+++...+++.|.-...+. ..+ ..          .+.....+..|    +..     -|.  
T Consensus       120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~g-lt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a  198 (442)
T KOG1404|consen  120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLG-LTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYA  198 (442)
T ss_pred             hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcc-cccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHH
Confidence            9999765543 1 2223566667776654322111 001 11          11111011011    100     000  


Q ss_pred             cccc---c--CCCccEEEEe-ecCCCccccCC---CCcc---c-cCCCcEEEEeccCc-CCCCc--cccccccEE--EeC
Q 043610          201 DALE---Q--NPDAKYLHIC-ANETIHGVEFK---EYPS---A-KNSTGILVADMSSN-FCSKP--VDVTRFGVI--YAG  262 (430)
Q Consensus       201 ~~l~---i--~~~~~lv~i~-~~~t~tG~~~p---ei~~---~-~~~g~~lvvD~a~s-~G~~~--idl~~~d~~--~~s  262 (430)
                      ++++   +  .+++-.-+|. .....-|++.+   -+.+   . +++|.+++.|++|+ ||-.-  ..++.-|++  +-+
T Consensus       199 ~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvT  278 (442)
T KOG1404|consen  199 KELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVT  278 (442)
T ss_pred             HHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHH
Confidence            1222   1  2333222222 33444566655   2333   2 68999999999976 43221  233333432  356


Q ss_pred             CCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          263 AQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       263 ~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      .-|.+| --=+|.++.++++.+.+.+...          .+.+++.-|+. ..+..++|+-+++    +.+.++..+...
T Consensus       279 mAKgiGnG~Pl~AVvtt~EIa~v~~~~~~----------~fnTyggnP~a-~avg~aVL~Vike----e~LqE~aa~vG~  343 (442)
T KOG1404|consen  279 MAKGIGNGFPLGAVVTTPEIADVLNQKSS----------HFNTYGGNPVA-CAVGLAVLKVIKE----ENLQENAAEVGS  343 (442)
T ss_pred             HHhhccCCCcceeeecCHHHHHHHHhccc----------cccccCCCchh-HHHHHHHHHHHHH----HhHHHHHHHHHH
Confidence            779994 1227888889998765432111          12244444443 3445567776653    678888888999


Q ss_pred             HHHHHHHccC-CceecCCCCCCCccceEEEEcC-CC-------chhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCC
Q 043610          342 LLYNVIDGSN-GFYKCPVEKSVRSFMNVPFTLE-KS-------DLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMP  411 (430)
Q Consensus       342 ~l~~~l~~~~-G~~~~~~~~~~rs~~iv~f~~~-~~-------~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t  411 (430)
                      +|.+.|.+.. +.+++. +-.-+..+ +-+.+- +.       .... .+.+.+++.|+.+..|...-..+||++-...|
T Consensus       344 yl~~~l~~l~d~h~iIG-dVRG~GLm-~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT  421 (442)
T KOG1404|consen  344 YLLEKLAALKDKHPIIG-DVRGRGLM-LGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCIT  421 (442)
T ss_pred             HHHHHHHHHhhcCCcee-ecccceeE-EEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCeecc
Confidence            9999988732 233332 21112211 112221 10       1111 36677888999986665443479999998999


Q ss_pred             HHHHHHHHHHH
Q 043610          412 LAGVEKLVAFM  422 (430)
Q Consensus       412 ~edv~~ll~~L  422 (430)
                      .||++.+++.+
T Consensus       422 ~edi~f~~~~~  432 (442)
T KOG1404|consen  422 KEDIDFAVEYF  432 (442)
T ss_pred             HHHHHHHHHHH
Confidence            99998888865

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.40  E-value=8.2e-05  Score=72.82  Aligned_cols=337  Identities=12%  Similarity=0.077  Sum_probs=173.1

Q ss_pred             ccccCCCCC-ceeecC-----CCCCCcHHHHHHHHHHhhhccCCCCcccccCCC-cHHHHHHHHHHHHHHHHHhCCCCCc
Q 043610           62 QIQSGQEDR-VFNFAA-----GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHR-GKEFKSIIEKAESDLRALLNIPQEY  134 (430)
Q Consensus        62 ~~~~~~~~~-~~l~~~-----gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~-~~~~~~~~~~~r~~la~l~g~~~~~  134 (430)
                      +|+.....+ ++.+..     ++..-.|+|.+++.+.+...          +|. ...+....-++.+.|.+.++-....
T Consensus        48 ~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~----------~hs~~~~~t~eav~l~~~l~~~~~~~~~~  117 (433)
T KOG1401|consen   48 SKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKL----------GHSSNGYFTLEAVELEEVLSAVLGKGSAE  117 (433)
T ss_pred             eeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhh----------eeccCccccHHHHHHHHHHHhcccCCCcc
Confidence            445444444 444444     23445889999998887652          221 1222222335556666666554432


Q ss_pred             EEEEEeCcHHHHHHHHHhhcC---C---CCC--cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCC-cC--CCCCCccc
Q 043610          135 SVLFLQGGATTQFAAVPLNLC---T---PND--PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAE-KY--TKIPNFDA  202 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~sl~---~---~gd--~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~-~~--g~~~d~~~  202 (430)
                      .|.|. +|||+|++.++.-..   .   +-+  .++.+.+++.|..+-- +...+ ..+-.+..+-. +.  ..--|.+.
T Consensus       118 rvff~-nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlga-ls~~~~s~y~~~~~p~~p~v~~~~ynd~t~  195 (433)
T KOG1401|consen  118 RVFFC-NSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGA-LSVTGNSKYGLPFDPIAPDVVTAEYNDSTA  195 (433)
T ss_pred             EEEEe-cCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhH-HHhhcccccCCCCCCCCCceeecccCCHHH
Confidence            66665 889999997755421   1   122  3888888877653211 11112 11111110000 00  00112233


Q ss_pred             cc--cC---CCccEEEEeecCCCccccCC---C----Ccc-ccCCCcEEEEeccCc-CCCCcccc-ccc-----cEEEeC
Q 043610          203 LE--QN---PDAKYLHICANETIHGVEFK---E----YPS-AKNSTGILVADMSSN-FCSKPVDV-TRF-----GVIYAG  262 (430)
Q Consensus       203 l~--i~---~~~~lv~i~~~~t~tG~~~p---e----i~~-~~~~g~~lvvD~a~s-~G~~~idl-~~~-----d~~~~s  262 (430)
                      ++  ++   .+...|++=-.... |-+.|   |    +.. |+++|+++|.|+++. +|-.-.-+ .++     |+  .+
T Consensus       196 l~k~~~~h~~~IaAVIvEPiqGa-GG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI--~t  272 (433)
T KOG1401|consen  196 LEKLFESHKGEIAAVIVEPIQGA-GGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDI--TT  272 (433)
T ss_pred             HHHHHHhCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcc--ee
Confidence            43  22   23445555333433 44444   3    233 358999999999986 23221111 111     43  45


Q ss_pred             CCccc--cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          263 AQKNV--GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       263 ~~K~~--gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      .-|.+  |.| +|...++++..+.+.+..+.|.        +.++ .-|..+..+...+|+++.+.+-++.+.+....|+
T Consensus       273 ~aK~L~gGlP-igA~~v~~kV~~~i~~~~~l~h--------g~Tf-~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~  342 (433)
T KOG1401|consen  273 VAKPLGGGLP-IGATGVRDKVAEMISPGDHLYH--------GGTF-SGNPLACSAGIKVLDELKDPETLKNVSKIGKELR  342 (433)
T ss_pred             ehhhccCCce-eEEEeehHHHHhhcCCCCcccc--------Cccc-CCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence            56888  333 7888899999888776555332        2222 3355666777788888876555677777777777


Q ss_pred             HHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC--CCCCeeEEee----cCCCCHHH
Q 043610          341 ELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH--RSVGGMRASI----YNAMPLAG  414 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~--~~~g~iRis~----~~~~t~ed  414 (430)
                      +.+++.+.+-. -.+..  --.|. .++-+.... .. .++.+....+|..+..+.  ....++||-+    ....++|+
T Consensus       343 ~~l~e~~~~~~-~~i~g--~~grg-l~ig~~~~~-p~-~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~  416 (433)
T KOG1401|consen  343 KLLDEYLKKTP-NSICG--GVGRG-LVIGFEFEG-PV-YKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEV  416 (433)
T ss_pred             HHHHHHhccCC-Cceee--eeeeE-EEEEEEEee-ch-hhhhhhhhhhhHHHHHHhcccccceEEEeccccccccCcHHH
Confidence            77777776522 11111  00121 222222211 00 123333333333322211  1123567766    22345899


Q ss_pred             HHHHHHHHHHHHHhh
Q 043610          415 VEKLVAFMKDFQAKH  429 (430)
Q Consensus       415 v~~ll~~L~~~~~~~  429 (430)
                      ++++++++.+.+.+.
T Consensus       417 i~~~l~i~~~~l~~~  431 (433)
T KOG1401|consen  417 IQRLLTILEKVLSAL  431 (433)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999987753

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.26  E-value=0.00047  Score=68.07  Aligned_cols=295  Identities=12%  Similarity=0.105  Sum_probs=165.3

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCC--CCcEEEEeCChhHHHHH--HHHHHhC-Cc
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTP--NDPVDYIVTGSWGDKAF--KEAQKFC-NP  183 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~--gd~vl~~~~g~~~~~~~--~~a~~~g-~~  183 (430)
                      ++...+.+-+....++++.|.+-. +--+. -++|.+=++++++. ..+  .+++++....+....-+  ..++..| ++
T Consensus       115 SQGrLqaLfefQtlv~dLTGm~VA-NASm~-DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i  192 (450)
T COG0403         115 SQGRLEALFEFQTLVADLTGLDVA-NASML-DEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEI  192 (450)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCcc-cchhh-hhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEE
Confidence            345667777889999999999854 33344 56888888877775 332  46676655555543221  1222334 33


Q ss_pred             eEEecCCCCcCCCCCCccccc-c-CCCccEEEEeecCCCcc-ccCC--CCccc-cCCCcEEEEecc-CcCCCC--ccccc
Q 043610          184 QVIWSGKAEKYTKIPNFDALE-Q-NPDAKYLHICANETIHG-VEFK--EYPSA-KNSTGILVADMS-SNFCSK--PVDVT  254 (430)
Q Consensus       184 ~~v~~~~~~~~g~~~d~~~l~-i-~~~~~lv~i~~~~t~tG-~~~p--ei~~~-~~~g~~lvvD~a-~s~G~~--~idl~  254 (430)
                      .++..         .|.++++ . +.++..|.+.+++ ..| ...+  +|.+. +++|++++|=.= -+++-+  |-.+ 
T Consensus       193 ~~~~~---------~d~~~l~~~~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~-  261 (450)
T COG0403         193 EVVDA---------DDLDDLESADDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEF-  261 (450)
T ss_pred             EEecc---------chhhhhhhccccCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCcccc-
Confidence            32221         2444555 3 3467788887766 457 4444  45554 688887776221 122221  2222 


Q ss_pred             cccEEEeCCCccccCCc-----cEEEEEcHHHHhccCCCCC-cccc------ccchhhc-----CCCCCCcc-HH--HHH
Q 043610          255 RFGVIYAGAQKNVGPSG-----VTIVIVRKDLLGNAQDKTP-LMLD------YKIHDEN-----NSLYNTPP-CY--CIY  314 (430)
Q Consensus       255 ~~d~~~~s~~K~~gp~G-----~g~l~v~~~~~~~~~~~~p-~~~~------~~~~~~~-----~~~~~T~~-~~--~~~  314 (430)
                      ..|++++++|-+-=|.|     +||+.+++++...+..+.- .-.|      |....+.     ...--|.| |.  .+.
T Consensus       262 GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLl  341 (450)
T COG0403         262 GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALL  341 (450)
T ss_pred             CCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHH
Confidence            12799999998532444     8899999998655422110 0001      1100000     00001333 11  223


Q ss_pred             HHHHH--HHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCe
Q 043610          315 MCGLV--FEYLLELGGLNEVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMV  391 (430)
Q Consensus       315 a~~~a--l~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~  391 (430)
                      ++.++  +-++- ..|+.++..++.+++.++.++|++. .|++++. + .+.  .-+++.++. +...++.++....|+-
T Consensus       342 A~~As~y~~~hG-p~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~-~-~fF--dt~~v~~~~-~~~~~l~~~~~~~G~~  415 (450)
T COG0403         342 ALAASMYAVYHG-PQGLKEIAERIHRLAAYLAAGLKEIGAGVELVF-D-HFF--DTFTVRVPE-EVAEALLAAAIAGGIN  415 (450)
T ss_pred             HHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHhhcCCceEecc-c-cce--eeEEEecch-hHHHHHHHHHHhcCCc
Confidence            33333  33343 3489999999999999999999953 4677763 2 222  135567663 2222455555555664


Q ss_pred             ecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          392 QLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       392 ~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ...  .....+=|++.-.+|++||+.+++++...
T Consensus       416 L~~--~~~~~~~ia~tEt~t~~~i~~l~~~~~~~  447 (450)
T COG0403         416 LRR--VDADTVLIALTETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             eee--ecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence            321  11124667776678899999999998764

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.20  E-value=1.8e-05  Score=77.86  Aligned_cols=283  Identities=12%  Similarity=0.037  Sum_probs=145.0

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH-HHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATT-QFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGK  190 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~-a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~  190 (430)
                      .+-..+...+-+..|++.-...+++ .-+|. .+.+.++++-  ..++.|++...++++.  +..+...| ++++|+...
T Consensus        56 ~ltn~l~~d~~~~~G~~~~~~~~~v-P~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc--~kai~~AGl~~~vV~~~~  132 (389)
T PF05889_consen   56 KLTNSLVLDALRLAGLRSVKSCFVV-PMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSC--FKAIERAGLEPVVVENVL  132 (389)
T ss_dssp             HHHHHHHHHHHHHTTHTTHCEEEEE-SS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHH--HHHHHHTT-EEEEE-EEE
T ss_pred             HHHHHHHHHHHHHcCCccccceEEE-ecccccHHHHHHHHHhcccCCceEEEeeccccch--HHHHHhcCCeEEEeeccC
Confidence            3344455556667888743245555 44443 3334455552  3477888877777653  33445668 888887532


Q ss_pred             CCcCCCCCCccccc-----cCCCccEEEEeecCCCccccCC---CCccc-cCCCcEEEEeccCcC---------------
Q 043610          191 AEKYTKIPNFDALE-----QNPDAKYLHICANETIHGVEFK---EYPSA-KNSTGILVADMSSNF---------------  246 (430)
Q Consensus       191 ~~~~g~~~d~~~l~-----i~~~~~lv~i~~~~t~tG~~~p---ei~~~-~~~g~~lvvD~a~s~---------------  246 (430)
                      . +..-..|.+.++     +.++..+.++++.+-..|..-|   +|+++ +++|+..++-+++++               
T Consensus       133 ~-~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~  211 (389)
T PF05889_consen  133 E-GDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRV  211 (389)
T ss_dssp             E-TTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHH
T ss_pred             C-CCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhc
Confidence            1 011122334444     3456788999999998999888   56775 699999999999999               


Q ss_pred             CCCcccccccc--EEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH
Q 043610          247 CSKPVDVTRFG--VIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL  324 (430)
Q Consensus       247 G~~~idl~~~d--~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~  324 (430)
                      |-+|++++..|  |++.++||.++-.       .+..+..+....|           +....||...   .+... ..+-
T Consensus       212 GRvda~vqS~dkNF~VPvGgai~As~-------~~~~i~~vs~~Yp-----------GRas~sp~ld---~~itL-l~LG  269 (389)
T PF05889_consen  212 GRVDAFVQSTDKNFMVPVGGAIMASF-------DPSGILAVSKEYP-----------GRASASPSLD---LFITL-LSLG  269 (389)
T ss_dssp             STCSEEEEEHHHHHCEESSHEEEEES-------SHHHHHHHHHTSH-----------SHBTSHHHHH---HHHHH-HHHH
T ss_pred             CCcceeeeecCCCEEecCCCcEEEec-------CHHHHHHHHHHhh-----------hhhhcccchH---HHHHH-HHHh
Confidence            76666665553  6666666555211       2444444321111           1111233222   12211 1121


Q ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHc---cCCceecCCCCCCCccceEEEEcCCC----chhH-HHHHHHHHcCCeecC--
Q 043610          325 ELGGLNEVEKMNRKKAELLYNVIDG---SNGFYKCPVEKSVRSFMNVPFTLEKS----DLEA-EFVKEAAKEKMVQLK--  394 (430)
Q Consensus       325 ~~~g~~~v~~~~~~l~~~l~~~l~~---~~G~~~~~~~~~~rs~~iv~f~~~~~----~~~~-~~~~~L~~~Gi~~~~--  394 (430)
                      . .|+........+...++.++|++   ..|-++.. .|.  -+..+.|.++..    ..+. .|..+|...||....  
T Consensus       270 ~-~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~-~p~--N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV  345 (389)
T PF05889_consen  270 C-TGYGALLKERKASFPYLKERLKKWAEEVGERLLE-TPR--NHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVV  345 (389)
T ss_dssp             H-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSS-STT---SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEE
T ss_pred             h-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CCC--CCeeEEEECccchhhccchhhhHHHHHHhCCcccceee
Confidence            1 13444444444444444444443   14544442 222  223355665521    1122 577889888765321  


Q ss_pred             --CC-C--------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          395 --GH-R--------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       395 --g~-~--------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                        +. .        ...++=+.-..-+++||||.+++.|+++++
T Consensus       346 ~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~  389 (389)
T PF05889_consen  346 TPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK  389 (389)
T ss_dssp             ETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred             ccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence              11 0        124688866667899999999999999864

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.19  E-value=0.00027  Score=77.32  Aligned_cols=205  Identities=7%  Similarity=-0.037  Sum_probs=119.5

Q ss_pred             CccEEEEee-cCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCccc--cCC
Q 043610          208 DAKYLHICA-NETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQKNV--GPS  270 (430)
Q Consensus       208 ~~~lv~i~~-~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K~~--gp~  270 (430)
                      ++..|++-- .....|++.+      .+.++ +++|+++|+|+++. ||-.  .+-.+.+    |+++  ..|.+  |.-
T Consensus       584 ~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~--~gKgLtgG~~  661 (817)
T PLN02974        584 HIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIAC--YAKLLTGGLV  661 (817)
T ss_pred             CEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEe--ecccccCCCC
Confidence            344444433 2455688887      34554 68999999999976 4422  1111222    5554  46888  322


Q ss_pred             ccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-
Q 043610          271 GVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-  349 (430)
Q Consensus       271 G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-  349 (430)
                      =+|.+.+++++.+........     .....+.+ ++-|..+..++.++|+.+++..-.+.+.++..++.+++.+.+.+ 
T Consensus       662 Plaa~l~~~~I~~~f~~~~~~-----~~~~hg~T-y~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~  735 (817)
T PLN02974        662 PLAATLATEEVFEAFRGPSKL-----DALLHGHS-YTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRA  735 (817)
T ss_pred             ccEEEEEcHHHHHhhcccccc-----CCcccCCC-CCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            278888999987754210000     00001223 35667788888889998875433456666666666666666622 


Q ss_pred             cCCceecCCCCCCCc-cceEEEEcCCC-c-------hhHHHHHHHH-HcCCeecCCCCCCCeeEEeecCCCCHHHHHHHH
Q 043610          350 SNGFYKCPVEKSVRS-FMNVPFTLEKS-D-------LEAEFVKEAA-KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs-~~iv~f~~~~~-~-------~~~~~~~~L~-~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll  419 (430)
                      ......+   .+.|. ..+..+.+.+. +       ...++.+.+. ++|+++.+.   .+.||+.+-..++++++++++
T Consensus       736 l~~~p~V---~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~---Gnvi~l~pP~~i~~e~l~~~~  809 (817)
T PLN02974        736 ISSLPNV---ERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL---GNVVYLMCGPTTSPETCTRLL  809 (817)
T ss_pred             HhhCCCe---eEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec---CCEEEEeCCCCCCHHHHHHHH
Confidence            1111111   11122 13344555321 1       1124677777 889998652   136899888899999999999


Q ss_pred             HHHHHHH
Q 043610          420 AFMKDFQ  426 (430)
Q Consensus       420 ~~L~~~~  426 (430)
                      +.|.+.+
T Consensus       810 ~~l~~~~  816 (817)
T PLN02974        810 RKVYRRL  816 (817)
T ss_pred             HHHHHHh
Confidence            9998865

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=97.99  E-value=0.0009  Score=64.65  Aligned_cols=280  Identities=14%  Similarity=0.198  Sum_probs=132.3

Q ss_pred             HHHHHHHHHHHhC-C-CCCcEEEEEeCcHHHHHHHHHhhcC-C---CCCcEEE-EeCChhHHHHHHHHHH-hCCceEEec
Q 043610          117 IEKAESDLRALLN-I-PQEYSVLFLQGGATTQFAAVPLNLC-T---PNDPVDY-IVTGSWGDKAFKEAQK-FCNPQVIWS  188 (430)
Q Consensus       117 ~~~~r~~la~l~g-~-~~~~~vv~~~~gaT~a~~~~~~sl~-~---~gd~vl~-~~~g~~~~~~~~~a~~-~g~~~~v~~  188 (430)
                      +++..+.|.++.| + .+++.|+|. .|+|+.+++++.+|. .   .+..+-| ....+|+.  +..... +....+-+.
T Consensus        48 L~~~Ir~LH~~VGNAvt~gr~IV~G-tGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~--Y~~qt~~f~s~~y~w~  124 (363)
T PF04864_consen   48 LERQIRRLHRVVGNAVTDGRYIVFG-TGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSS--YPEQTDFFDSRLYKWA  124 (363)
T ss_dssp             HHHHHHHHHHHH-SB--TTSEEEEE-CHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CH--HHHHCCCT-BTTEEEE
T ss_pred             HHHHHHHHHHHhccccccCcEEEEc-CCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccc--hHHHHHhccccCcccc
Confidence            3444445555555 2 355577776 578999999988874 1   2333333 33345542  121111 111111111


Q ss_pred             CCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCCCCccccCCCcEEEEeccCcCCCC-cccc-ccccEEEeCCC
Q 043610          189 GKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK-PVDV-TRFGVIYAGAQ  264 (430)
Q Consensus       189 ~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~pei~~~~~~g~~lvvD~a~s~G~~-~idl-~~~d~~~~s~~  264 (430)
                      +         |...+.  -++.+-+=++|.+|||.|.+...+.  +..+..+|.|-++-+.+. ||.- .+-|++.++.+
T Consensus       125 G---------da~~~~~~~~~~~~IElVTSPNNPDG~lr~~V~--~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~S  193 (363)
T PF04864_consen  125 G---------DASNFKNSDNPSPYIELVTSPNNPDGQLREAVL--NGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTLS  193 (363)
T ss_dssp             E---------ECCCGTT-S-CCGEEEEEESS-TTT------SS--TTTEEEEEEE-TT-STTTS---S-B--SEEEEEHH
T ss_pred             c---------cHHhhccCCCCCCeEEEEeCCCCCcccccchhc--CCCCcceeeeeeeecccccccCCCCCCceEEEEEe
Confidence            1         111221  1233445567899999999877322  234567899999888775 4432 23479999999


Q ss_pred             ccccCCc--cEEEEEcHHHHhc-cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcC--------HHHHH
Q 043610          265 KNVGPSG--VTIVIVRKDLLGN-AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGG--------LNEVE  333 (430)
Q Consensus       265 K~~gp~G--~g~l~v~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g--------~~~v~  333 (430)
                      |.=|=+|  +|+.+++++.+.+ |..    |+...       +.| .+--.+.-+..-|+.+.+..+        ++--.
T Consensus       194 K~TGHAGSR~GWAlVKD~~Va~kM~~----y~~ln-------TiG-vS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~  261 (363)
T PF04864_consen  194 KLTGHAGSRFGWALVKDEEVAKKMTK----YMELN-------TIG-VSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGY  261 (363)
T ss_dssp             HHCS-GGG-EEEEEES-HHHHHHHHH----HHHHH-------CSS---HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHH
T ss_pred             cccCccccccceeeecCHHHHHHHHH----HHHHh-------ccc-CcHHHHHHHHHHHHHHHhcccCCCCccchHHHHH
Confidence            9989778  9999999876644 321    22110       011 111222222333332221110        11123


Q ss_pred             HHHHHHHHHHHHHHHccCCceecCCCCC-------C--CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC---CCCe
Q 043610          334 KMNRKKAELLYNVIDGSNGFYKCPVEKS-------V--RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR---SVGG  401 (430)
Q Consensus       334 ~~~~~l~~~l~~~l~~~~G~~~~~~~~~-------~--rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~---~~g~  401 (430)
                      +..+++=.+|++.+....-|.+-...+.       .  .+|.---+..+..+ +.+-.+-|++.||+...|..   ...+
T Consensus       262 ~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee-d~DC~~~l~~~~I~tr~G~~fga~~ry  340 (363)
T PF04864_consen  262 STMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE-DEDCYAVLREAKIITRSGVLFGADSRY  340 (363)
T ss_dssp             HHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG-GSSHHHHHHCTTEEEEEGGGGTS-TTE
T ss_pred             HHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc-cccHHHHHHhCCcccCCCCccCCCCCe
Confidence            3333444455566665433333211111       0  12322223333211 22466677888999876643   2458


Q ss_pred             eEEeecCCCCHHHHHHHHHHHHHH
Q 043610          402 MRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       402 iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +|+|+.-  +++|.+.|++.|..+
T Consensus       341 VRlSml~--~~d~Fd~l~~rL~~l  362 (363)
T PF04864_consen  341 VRLSMLK--RDDDFDQLLERLSKL  362 (363)
T ss_dssp             EEEESSS---HHHHHHHHHHHHCC
T ss_pred             EEEeccC--CHHHHHHHHHHHHhh
Confidence            9999975  899999999998754

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=97.94  E-value=0.00035  Score=69.21  Aligned_cols=241  Identities=12%  Similarity=0.066  Sum_probs=125.0

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-----
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-----  155 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-----  155 (430)
                      -+|.+.+++.+.+........    .....+.    ..++.+.|.++++-..+ .+.|. .||++|++.++.-..     
T Consensus        33 ~~p~i~~ai~~~~~~~~~~~~----~~~~~~~----~~~la~~L~~~~p~~~~-~v~f~-~sGseAve~Alkla~~~~~~  102 (339)
T PF00202_consen   33 NHPEIAEAIAEQANKLNYVSF----SGFTHPE----AAELAEKLAELFPGGLD-RVFFA-NSGSEAVEAALKLARQYHNK  102 (339)
T ss_dssp             T-HHHHHHHHHHHHHCSSCST----TTSEEHH----HHHHHHHHHHHSSTTEE-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred             CccccchhHHHHhhhcccccc----cceeccc----hhhhhhhhhhccccccc-eeeec-cCchHHHHHHHHHhhccccc
Confidence            468999999988765321100    0111233    33666777777743332 56664 789999997765433     


Q ss_pred             --CCC-CcEEEEeCChhHHHHHHHH-------HH-hC----CceEEecCCCCc---CC-CCCCcccc-c--cCCCccEEE
Q 043610          156 --TPN-DPVDYIVTGSWGDKAFKEA-------QK-FC----NPQVIWSGKAEK---YT-KIPNFDAL-E--QNPDAKYLH  213 (430)
Q Consensus       156 --~~g-d~vl~~~~g~~~~~~~~~a-------~~-~g----~~~~v~~~~~~~---~g-~~~d~~~l-~--i~~~~~lv~  213 (430)
                        .++ .+|+.+..++.|.-.....       +. .+    .+..++......   .. ...+.+++ .  ..+++..|+
T Consensus       103 ~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi  182 (339)
T PF00202_consen  103 RAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVI  182 (339)
T ss_dssp             THHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred             ccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEE
Confidence              233 4566555555442111111       11 11    112233211000   00 00000011 1  234566666


Q ss_pred             EeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC--Cccccccc----cEEEeCCCccc-cCCccEEEEEc
Q 043610          214 ICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS--KPVDVTRF----GVIYAGAQKNV-GPSGVTIVIVR  278 (430)
Q Consensus       214 i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~--~~idl~~~----d~~~~s~~K~~-gp~G~g~l~v~  278 (430)
                      +--+....|...+      ++.++ +++|+++++|+++. +|-  ..+-.+.+    |+++.+  |.+ |-.-++.++++
T Consensus       183 vEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~~~  260 (339)
T PF00202_consen  183 VEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAVLGS  260 (339)
T ss_dssp             EESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEEEEE
T ss_pred             EeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccc--cchhhhhhccccccc
Confidence            6555666677765      24444 59999999999987 432  22222222    787776  999 32337888899


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      +++.+...+..           .++++ .-+..+..++.++|+.+++.    .+.++.+++.+++++.|++
T Consensus       261 ~~i~~~~~~~~-----------~~~T~-~g~p~~~aaa~~~l~~~~~~----~~~~~~~~~g~~l~~~L~~  315 (339)
T PF00202_consen  261 EEIMEAFQPGS-----------HGSTF-GGNPLSCAAALATLEILEEE----DLLERVRELGERLREGLRE  315 (339)
T ss_dssp             HHHHTTSCTTS-----------STCTT-TT-HHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHH
T ss_pred             chhhccccccc-----------ccccc-ccchHhhhhhhhHHHhhccH----HHHHHHHHHHHHHHHHHHH
Confidence            99877543211           11222 23556778888899988753    3445555556666666654

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK12566 glycine dehydrogenase; Provisional

Probab=97.88  E-value=0.005  Score=67.63  Aligned_cols=284  Identities=11%  Similarity=0.059  Sum_probs=159.0

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCC--CCcEEEEeCChhHHHHH--HHHHHhC-Cc
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTP--NDPVDYIVTGSWGDKAF--KEAQKFC-NP  183 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~--gd~vl~~~~g~~~~~~~--~~a~~~g-~~  183 (430)
                      ++...+.+-+....++++.|.+-. +--+. -++|.+-++++++. ..+  ..++++...-+.....+  ..++..| ++
T Consensus       119 sQG~Lqal~e~Qtmi~~LtGm~va-NASl~-D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i  196 (954)
T PRK12566        119 AQGRLEALLNFQQMTIDLTGLDLA-NASLL-DEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFEL  196 (954)
T ss_pred             hhHHHHHHHHHHHHHHHHhCchhh-hhhhc-cchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEE
Confidence            455667777889999999999743 22223 45666666555544 222  34566544444433221  1122233 22


Q ss_pred             eEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEecc--CcCCCCccccccc
Q 043610          184 QVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMS--SNFCSKPVDVTRF  256 (430)
Q Consensus       184 ~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a--~s~G~~~idl~~~  256 (430)
                      ++               ++++  +++++..|++.+++ ..|.+.|  +|.++ ++.|++++ +++  -+++.+. .-.++
T Consensus       197 ~~---------------~~~~~~~~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll~-~Pge~  258 (954)
T PRK12566        197 VV---------------DAVDNLAAHAVFGALLQYPD-THGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVLT-PPGEL  258 (954)
T ss_pred             EE---------------cchhhcCCCCEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCCC-Chhhc
Confidence            21               1222  34567777777655 5699988  67775 77888755 343  2333321 11334


Q ss_pred             --cEEEeCCCcc-----ccCCccEEEEEcHHHHhccCCCCC-cccc------ccchhhc-----CCCCCCccH---HHHH
Q 043610          257 --GVIYAGAQKN-----VGPSGVTIVIVRKDLLGNAQDKTP-LMLD------YKIHDEN-----NSLYNTPPC---YCIY  314 (430)
Q Consensus       257 --d~~~~s~~K~-----~gp~G~g~l~v~~~~~~~~~~~~p-~~~~------~~~~~~~-----~~~~~T~~~---~~~~  314 (430)
                        |++++++|-+     +|-++.||+.+++++...+..+.- ...|      |....+.     ...-.|.|.   ..+.
T Consensus       259 GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~  338 (954)
T PRK12566        259 GADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLL  338 (954)
T ss_pred             CCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHH
Confidence              6777666542     232238999999987665422110 0001      1100000     000123331   2333


Q ss_pred             HHHHHH--HHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCee
Q 043610          315 MCGLVF--EYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQ  392 (430)
Q Consensus       315 a~~~al--~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~  392 (430)
                      ++.+++  -++- ..|+.++.+++..++.++.++|.+ .|+++.. + .+. . -+.+.+..  ...++.++..+.||-.
T Consensus       339 A~~a~~Y~~~~G-p~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~-~-~fF-~-~~~v~~~~--~~~~~~~~a~~~~~n~  410 (954)
T PRK12566        339 ANIAGFYAVYHG-PEGLKRIAQRVHRLTAILAAGLEA-KGIKRLN-R-HFF-D-TLTLEVGG--AQAAIIESAEAARINL  410 (954)
T ss_pred             HHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHh-cCCcccc-C-Ccc-c-eEEEEccC--CHHHHHHHHHHCCCee
Confidence            333333  2222 248889999999999999999997 8988752 2 211 1 24445431  1236888777788765


Q ss_pred             cCCCCCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          393 LKGHRSVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       393 ~~g~~~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                      ..-  ..+.+.||+.-.++.+|++.++.++.
T Consensus       411 r~~--~~~~~~~s~de~~~~~~~~~~~~~f~  439 (954)
T PRK12566        411 RIL--GRGRLGVSLDETCDEATVARLFDIFL  439 (954)
T ss_pred             EEe--CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence            421  12468899988899999999999884

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.82  E-value=0.00073  Score=69.61  Aligned_cols=300  Identities=14%  Similarity=0.109  Sum_probs=166.7

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH---HHHhhcC-CCCC--c-EEEEeCChhHHHHHHHHHHhC-C
Q 043610          111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA---AVPLNLC-TPND--P-VDYIVTGSWGDKAFKEAQKFC-N  182 (430)
Q Consensus       111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~---~~~~sl~-~~gd--~-vl~~~~g~~~~~~~~~a~~~g-~  182 (430)
                      +.+.+++.+++++|.++.|.+   .+.+-.++|..+=.   .++.+.. .+|+  + |-.+.....|..-.. |.-.| +
T Consensus       578 qGY~~lf~~Le~~Lc~iTG~D---~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPAS-A~Magmk  653 (1001)
T KOG2040|consen  578 QGYQQLFTELEKDLCEITGFD---SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPAS-AAMAGMK  653 (1001)
T ss_pred             hhHHHHHHHHHHHhheeeccc---ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhh-HHhcCCE
Confidence            456788999999999999987   35555555554433   2344433 3443  2 222222222221111 22346 7


Q ss_pred             ceEEecCCCCcCCCCCCccccc-----cCCCccEEEEeecCCCccccCC---CCccc-cCCCcEEEEeccCc---CC-CC
Q 043610          183 PQVIWSGKAEKYTKIPNFDALE-----QNPDAKYLHICANETIHGVEFK---EYPSA-KNSTGILVADMSSN---FC-SK  249 (430)
Q Consensus       183 ~~~v~~~~~~~~g~~~d~~~l~-----i~~~~~lv~i~~~~t~tG~~~p---ei~~~-~~~g~~lvvD~a~s---~G-~~  249 (430)
                      ++.|....   +| -+|..+|+     -.++-..+.++.++|. |+--+   +++.+ +++|.-+++|++-.   +| ..
T Consensus       654 vvpV~~~~---~G-~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~  728 (1001)
T KOG2040|consen  654 VVPVGCDA---NG-NIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCR  728 (1001)
T ss_pred             EEEeeccC---CC-CccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhcCCEEEecCCCccceecccC
Confidence            76666542   56 46877775     2456778999987774 77766   56665 79999999999742   22 12


Q ss_pred             ccccccccEEEeCCCcccc-CC-----ccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCc---cHH--HHHHHH-
Q 043610          250 PVDVTRFGVIYAGAQKNVG-PS-----GVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP---PCY--CIYMCG-  317 (430)
Q Consensus       250 ~idl~~~d~~~~s~~K~~g-p~-----G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~---~~~--~~~a~~-  317 (430)
                      |=|+. .||.--..||.|. |.     |+|-+-+.+.+..-+ |.-|.. +... .+...-.|+.   |+.  .+.... 
T Consensus       729 pGd~G-aDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfL-P~HpVv-s~~~-~~~~~~~gsVsaaP~Gsa~ILpISw  804 (1001)
T KOG2040|consen  729 PGDIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVV-SPGR-PEDTSPVGSVSAAPWGSALILPISW  804 (1001)
T ss_pred             Ccccc-ccceeecccceeeecCCCCCCCCCccchhhhccccC-CCCCcc-CCCC-CCCCCCccceeccCCCcceeehhHH
Confidence            32322 2688888999885 54     466676666654332 111111 0000 0000001111   111  122222 


Q ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC----CchhH-HHHHHHHHcCCee
Q 043610          318 LVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK----SDLEA-EFVKEAAKEKMVQ  392 (430)
Q Consensus       318 ~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~----~~~~~-~~~~~L~~~Gi~~  392 (430)
                      +.++.+- .+|+..-.+.---.++++..+|+.  .++++-.++.....+-+.+.+.+    .+.+. +++++|.+.|+-.
T Consensus       805 aYikmMG-~~GL~~as~~AiLNaNYMakRLe~--hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHa  881 (1001)
T KOG2040|consen  805 AYIKMMG-SGGLKDASKIAILNANYMAKRLES--HYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHA  881 (1001)
T ss_pred             HHHHHhc-ccccchhhHHHhhhhHHHHHHHhh--ccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCC
Confidence            2334333 357776666666678899999985  35554322211112223333321    24566 7999999999874


Q ss_pred             cC-CCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          393 LK-GHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       393 ~~-g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      -. .+.-.|.+=|-+.-.-+.+|+|||.++|..+-
T Consensus       882 PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIr  916 (1001)
T KOG2040|consen  882 PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIR  916 (1001)
T ss_pred             CccccccCCceEeccCccccHHHHHHHHHHHHHHH
Confidence            21 12224567777776667899999999987653

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=97.47  E-value=0.0038  Score=59.30  Aligned_cols=255  Identities=15%  Similarity=0.175  Sum_probs=139.1

Q ss_pred             cHHHHHHHHHh---hcCCCCCcEEEEeCChhHHHHHHHHHHhC--CceEEecCCCCcCCCCCCccccc--c--CCCccEE
Q 043610          142 GATTQFAAVPL---NLCTPNDPVDYIVTGSWGDKAFKEAQKFC--NPQVIWSGKAEKYTKIPNFDALE--Q--NPDAKYL  212 (430)
Q Consensus       142 gaT~a~~~~~~---sl~~~gd~vl~~~~g~~~~~~~~~a~~~g--~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~~lv  212 (430)
                      |||.|+.....   .++.  ++.+++.+..|...- ...++.|  .+...+.-+.  ...-+|++-+.  +  .|.-..+
T Consensus       107 sGTGAl~~~A~Fl~~~~~--~~~VY~SnPTW~nH~-~if~~aGf~tv~~Y~yWd~--~~k~~d~e~~Lsdl~~APe~si~  181 (410)
T KOG1412|consen  107 SGTGALRIAADFLATFYN--KNTVYVSNPTWENHH-AIFEKAGFTTVATYPYWDA--ENKCVDLEGFLSDLESAPEGSII  181 (410)
T ss_pred             cccchhhhhHHHHHHhcc--cceeEecCCchhHHH-HHHHHcCCceeeeeeeecC--CCceecHHHHHHHHhhCCCCcEE
Confidence            56888776422   2233  455677777666432 2345556  3333322110  11235555432  3  3433333


Q ss_pred             EEee-cCCCccccCC-----CCccc-cCCCcEEEEec-cCcCCCCccccccc--------c---EEEeCCCccccCCc--
Q 043610          213 HICA-NETIHGVEFK-----EYPSA-KNSTGILVADM-SSNFCSKPVDVTRF--------G---VIYAGAQKNVGPSG--  271 (430)
Q Consensus       213 ~i~~-~~t~tG~~~p-----ei~~~-~~~g~~lvvD~-a~s~G~~~idl~~~--------d---~~~~s~~K~~gp~G--  271 (430)
                      .+.. .+||||+--.     +|++. ++++.+.+.|- .|++..-+.|-+.|        +   |+.-|+.|.+|..|  
T Consensus       182 iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneR  261 (410)
T KOG1412|consen  182 ILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNER  261 (410)
T ss_pred             eeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhccccccc
Confidence            3332 3899998766     36664 77888999995 48888777665554        1   67789999999777  


Q ss_pred             cEEEE--E-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH--HHHH--hcCHHHHHHHHHHHHHHHH
Q 043610          272 VTIVI--V-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE--YLLE--LGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       272 ~g~l~--v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~--~l~~--~~g~~~v~~~~~~l~~~l~  344 (430)
                      +|-+.  + ++..+..+......       . ......-||.++...+...|.  .+.+  ...+..+..|+.+.+..|+
T Consensus       262 vGnltvv~~n~a~i~~v~SQl~l-------v-iR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLr  333 (410)
T KOG1412|consen  262 VGNLTVVVNNPAVIAGVKSQLTL-------V-IRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALR  333 (410)
T ss_pred             ccceEEEecChhHHHHHHHHHHH-------H-HhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55443  2 33333322111000       0 011223456666666666552  1111  1246788889999999999


Q ss_pred             HHHHccCCc----eecCCCCCCCccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCCCCCeeEEeecCCCCHHHHHHHH
Q 043610          345 NVIDGSNGF----YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHRSVGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       345 ~~l~~~~G~----~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll  419 (430)
                      +.|.+ ++.    ..+.    ... +.++|.    ++.+.-+++|.+ +.|+.+..      =||++.+.| ...+|-+.
T Consensus       334 d~L~a-L~TPGtWDHI~----~Qi-GMFSyT----GLtp~qV~~li~~h~vyLl~~------GRInisGLN-~~NveyVA  396 (410)
T KOG1412|consen  334 DHLVA-LKTPGTWDHIT----QQI-GMFSYT----GLTPAQVDHLIENHKVYLLSD------GRINISGLN-MKNVEYVA  396 (410)
T ss_pred             HHHHh-cCCCCcHHHHH----hhc-cceeec----CCCHHHHHHHHHhceEEEecC------CcEeeeccc-cccHHHHH
Confidence            99886 332    1111    122 345544    456667778754 57776542      257766654 34555555


Q ss_pred             HHHHHHH
Q 043610          420 AFMKDFQ  426 (430)
Q Consensus       420 ~~L~~~~  426 (430)
                      .+|.+..
T Consensus       397 kAIde~V  403 (410)
T KOG1412|consen  397 KAIDETV  403 (410)
T ss_pred             HHHHHHH
Confidence            5555544

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=96.82  E-value=0.0095  Score=57.46  Aligned_cols=183  Identities=18%  Similarity=0.213  Sum_probs=107.9

Q ss_pred             cCCCccccCC-----CCccc-cCCCcEEEEecc-CcCCCCccccccc----------c-EEEeCCCccccCCc--cEEE-
Q 043610          217 NETIHGVEFK-----EYPSA-KNSTGILVADMS-SNFCSKPVDVTRF----------G-VIYAGAQKNVGPSG--VTIV-  275 (430)
Q Consensus       217 ~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a-~s~G~~~idl~~~----------d-~~~~s~~K~~gp~G--~g~l-  275 (430)
                      .+||||+--.     +|.++ ++.+.+-++|.+ |+|..-++|-+++          + ++.-|.-|..|..|  +|-+ 
T Consensus       207 aHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~s  286 (427)
T KOG1411|consen  207 AHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALS  286 (427)
T ss_pred             hcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeE
Confidence            5899998755     35554 678888899976 7777776665542          2 67889999999878  5544 


Q ss_pred             EE--cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHH-------HHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          276 IV--RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVF-------EYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       276 ~v--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al-------~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                      ++  +.+...++..+....        -.-++..||..+...+...|       +++.   .++.+..|+...+..|++.
T Consensus       287 vvc~~ad~A~rV~SQlk~l--------iRpmYSnPP~hGArIv~~Il~d~~l~~~W~~---evk~MadRi~~mR~~L~d~  355 (427)
T KOG1411|consen  287 VVCKDADEAKRVESQLKIL--------IRPMYSNPPLHGARIVATILSDPDLKNQWLG---EVKGMADRIISMRQQLFDA  355 (427)
T ss_pred             EEecCHHHHHHHHHHHHHH--------hcccccCCCccchhhhhhccCChHHHHHHHH---HHHHHHHhhhhhHHHHhHH
Confidence            22  333333322110000        01123456655544444433       2222   4678888999999999999


Q ss_pred             HHccCCcee----cCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCCCCCeeEEeecCCCCHHHHHHHHHH
Q 043610          347 IDGSNGFYK----CPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       347 l~~~~G~~~----~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~  421 (430)
                      |.+ .|...    +.    .+- +.++|.    ++.++-++.|.++ -|+....      =|||+.+-+ ...|..|.++
T Consensus       356 L~~-~gs~~~W~hI~----~QI-GMF~fT----gl~peQv~~l~ke~~iYmT~d------GRiS~aG~s-s~nV~yLa~a  418 (427)
T KOG1411|consen  356 LEK-EGSPGNWSHIT----KQI-GMFCFT----GLNPEQVDWLTKEYHIYLTKD------GRISMAGLS-SSNVPYLADA  418 (427)
T ss_pred             hhc-CCCCccHHHHH----Hhh-heeeec----CCCHHHHHHHHhhheeeeccC------ceEeecccc-ccCCcccchh
Confidence            986 44321    21    122 346665    4566777777554 5554321      467777543 4556677777


Q ss_pred             HHHHHH
Q 043610          422 MKDFQA  427 (430)
Q Consensus       422 L~~~~~  427 (430)
                      |..+.+
T Consensus       419 ih~vtk  424 (427)
T KOG1411|consen  419 IHAVTK  424 (427)
T ss_pred             hHhHhc
Confidence            766543

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=96.49  E-value=0.012  Score=51.24  Aligned_cols=52  Identities=10%  Similarity=0.089  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHHHhC----CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCCh
Q 043610          115 SIIEKAESDLRALLN----IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGS  168 (430)
Q Consensus       115 ~~~~~~r~~la~l~g----~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~  168 (430)
                      +..+.+.+.+.+.+|    ++++ +|+++ +|++.++..++..++.|||.|++..+.+
T Consensus        96 ~lR~AiA~~l~~~~g~~v~~~pd-~Ivvt-~Ga~~al~~l~~~l~dpGD~VlVp~P~Y  151 (153)
T PLN02994         96 NFRKAIANFMAEARGGRVKFDAD-MIVLS-AGATAANEIIMFCIADPGDAFLVPTPYY  151 (153)
T ss_pred             HHHHHHHHHHHHHhCCCCccchh-heEEc-CCHHHHHHHHHHHHcCCCCEEEEeCCCC
Confidence            344566777777777    3454 77664 8899999999999999999999876654

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=96.14  E-value=0.47  Score=45.23  Aligned_cols=319  Identities=13%  Similarity=0.091  Sum_probs=155.5

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CC
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CT  156 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~  156 (430)
                      +-..|.|.++....|....        .+.| --..++.+-++...+.+=+.    .+.++.+|++||+.+++.-.  +.
T Consensus        60 ghchp~VV~A~~kQmat~~--------tN~R-Flhd~lv~cA~~l~stlPeL----svc~F~NSGSEANDLALRLAR~ft  126 (452)
T KOG1403|consen   60 GHCHPEVVRAGAKQMATIS--------TNNR-FLHDELVQCARTLTSTLPEL----SVCFFVNSGSEANDLALRLARNFT  126 (452)
T ss_pred             ccCCHHHHHHHHHHHhHhc--------ccch-hhHHHHHHHHHHHhhcCCCc----eEEEEecCCchhhHHHHHHHHhhc
Confidence            4568899999888876421        1111 11235566667666655553    34555689999999765432  23


Q ss_pred             CCCcEEEEeCChhHHHH-HHHH-----HH-hC--CceEEecCC-CCcC-CC-----CCCc-------cccc-c-----CC
Q 043610          157 PNDPVDYIVTGSWGDKA-FKEA-----QK-FC--NPQVIWSGK-AEKY-TK-----IPNF-------DALE-Q-----NP  207 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~-~~~a-----~~-~g--~~~~v~~~~-~~~~-g~-----~~d~-------~~l~-i-----~~  207 (430)
                      +-..+++++..+.|+-. ..+.     .+ .+  ++.++.+.+ ++-+ |.     .++.       ++++ |     +.
T Consensus       127 khqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~  206 (452)
T KOG1403|consen  127 KHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAK  206 (452)
T ss_pred             ccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhc
Confidence            34456667766555410 0000     11 11  323333211 0011 10     0111       1122 1     11


Q ss_pred             --CccEEEEeecCCCccccCC--C----Ccc-ccCCCcEEEEeccCc-CCCC---ccccccccEE--EeCCCcccc-CCc
Q 043610          208 --DAKYLHICANETIHGVEFK--E----YPS-AKNSTGILVADMSSN-FCSK---PVDVTRFGVI--YAGAQKNVG-PSG  271 (430)
Q Consensus       208 --~~~lv~i~~~~t~tG~~~p--e----i~~-~~~~g~~lvvD~a~s-~G~~---~idl~~~d~~--~~s~~K~~g-p~G  271 (430)
                        ++...+.-...+--|.++|  .    +.+ .+.+|..++.|++|. ||-+   -..+.-+||+  +-+..|-.| -.-
T Consensus       207 g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhP  286 (452)
T KOG1403|consen  207 GQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHP  286 (452)
T ss_pred             CCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCCe
Confidence              1222222234556788888  2    333 268999999999984 4432   1122222321  223445443 111


Q ss_pred             cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      ++.+...+++.+.....-         .+.+.++|.-|+. .+...+.|+.+++    +.+..+..+..++|...|+...
T Consensus       287 Va~VattkeIA~Af~atg---------v~YFNTyGGnPVs-CAv~laVm~v~e~----E~Lq~ha~~vG~~L~~lL~~~k  352 (452)
T KOG1403|consen  287 VAAVATTKEIAQAFHATG---------VEYFNTYGGNPVS-CAVGLAVMRVCED----ENLQEHAQQVGEKLEVLLRRLK  352 (452)
T ss_pred             eeEEeccHHHHHHhcccc---------ceehhccCCCchh-HHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHh
Confidence            566777777765533211         1222345544443 3333445555442    5667777777777777776521


Q ss_pred             -CceecCCCCCCCccceEE-EEc-CCC------chhH-HHHHHHHH-cCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610          352 -GFYKCPVEKSVRSFMNVP-FTL-EKS------DLEA-EFVKEAAK-EKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       352 -G~~~~~~~~~~rs~~iv~-f~~-~~~------~~~~-~~~~~L~~-~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~  420 (430)
                       ..+++.   +.|.-+.+. +.+ ++.      ...+ .++.+|++ .+|.........+.+.|-+--.-++++.+.++.
T Consensus       353 ~kh~~IG---DvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~  429 (452)
T KOG1403|consen  353 QKHECIG---DVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVL  429 (452)
T ss_pred             hhcccee---ccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHH
Confidence             122322   234333222 222 110      1122 36667765 467754321122456666544456888888888


Q ss_pred             HHHHHHH
Q 043610          421 FMKDFQA  427 (430)
Q Consensus       421 ~L~~~~~  427 (430)
                      .|.+++.
T Consensus       430 ~ld~iLT  436 (452)
T KOG1403|consen  430 GLDEILT  436 (452)
T ss_pred             HHHHHHH
Confidence            8877653

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=96.07  E-value=0.97  Score=44.31  Aligned_cols=315  Identities=11%  Similarity=0.119  Sum_probs=164.2

Q ss_pred             CCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC
Q 043610           76 AGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC  155 (430)
Q Consensus        76 ~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~  155 (430)
                      .|.+.+......+|..--+           ....++.|.    .++..++++||..  |.+=.-||-+.|.+.  +.-++
T Consensus        55 SGTgams~~qwaamm~GDE-----------AYagsrs~~----~L~~avkdifGfq--~~iPthQGRgAE~Il--~~i~i  115 (471)
T COG3033          55 SGTGAMTDKQWAAMMRGDE-----------AYAGSRSYY----ALADAVKDIFGFQ--YTIPTHQGRGAENIL--IPILI  115 (471)
T ss_pred             CCcccccHHHHHHHhccch-----------hhcccccHH----HHHHHHHHhcCce--eeeeccCCccHHHHH--HHHHh
Confidence            3666677666666654322           112233444    4556677888874  233333444444432  23333


Q ss_pred             C-----CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC------CcCCCCCCccccc--cC----CCccEEEEee-
Q 043610          156 T-----PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA------EKYTKIPNFDALE--QN----PDAKYLHICA-  216 (430)
Q Consensus       156 ~-----~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~------~~~g~~~d~~~l~--i~----~~~~lv~i~~-  216 (430)
                      +     ||.+.+++.+.+|-.-- -..+..| .++-+.+.+.      .++..-+|++.|+  |+    +++-+|+++- 
T Consensus       116 k~~~~~pg~~~~~~sN~~FdTTr-~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT  194 (471)
T COG3033         116 KKGEQEPGSKMVAFSNYHFDTTR-GHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTIT  194 (471)
T ss_pred             hhccccCCccccccccceecchh-HHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEe
Confidence            3     55555556677774210 1123455 4444443221      1122235555555  22    3455555543 


Q ss_pred             cCCCccccCC-----CCccc-cCCCcEEEEeccCc-----C------CCCccccccc--------cEEEeCCCccc-cCC
Q 043610          217 NETIHGVEFK-----EYPSA-KNSTGILVADMSSN-----F------CSKPVDVTRF--------GVIYAGAQKNV-GPS  270 (430)
Q Consensus       217 ~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s-----~------G~~~idl~~~--------d~~~~s~~K~~-gp~  270 (430)
                      +|+.-|.-..     ++.++ +++++.++.|++--     |      |-....++++        |-++.|+-|-- -+-
T Consensus       195 ~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm  274 (471)
T COG3033         195 NNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM  274 (471)
T ss_pred             ccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc
Confidence            4444554444     34455 69999999998621     1      1111222221        66888888877 577


Q ss_pred             ccEEEEEcHHH----HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          271 GVTIVIVRKDL----LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       271 G~g~l~v~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                      | ||+..+++-    -+.+...+-.       .+.+..+|...--.+.+++..|..-.   ..+.+..|..+. ++|.++
T Consensus       275 G-Gfl~~~D~~~fDvy~~~~~~~V~-------~eG~~tYGgl~GrdmealAvGL~e~~---~~~yl~~Rv~Qv-~YL~~~  342 (471)
T COG3033         275 G-GFLCFKDDSFFDVYEECRTLVVV-------QEGFPTYGGLAGRDMEALAVGLREGV---NFDYLAHRVAQV-QYLADG  342 (471)
T ss_pred             c-cEEEecCccHHHHHHHHHhheEe-------eccccccCcccchhHHHHHHHHHHhc---CcHHHHHHHHHH-HHHHHH
Confidence            8 899888762    2222211111       12223445555555666666665432   345555555554 688889


Q ss_pred             HHccCCceecCCCCCCCccceEEEE----cC---CCchhH-HHHHHHH-HcCCeecC-CC----C----------CCCee
Q 043610          347 IDGSNGFYKCPVEKSVRSFMNVPFT----LE---KSDLEA-EFVKEAA-KEKMVQLK-GH----R----------SVGGM  402 (430)
Q Consensus       347 l~~~~G~~~~~~~~~~rs~~iv~f~----~~---~~~~~~-~~~~~L~-~~Gi~~~~-g~----~----------~~g~i  402 (430)
                      |.+ .|..++....   ... +-+.    +|   ...... .|+-.|. +.||..+. |.    +          ...-+
T Consensus       343 l~~-~GVpi~~paG---GHa-vfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elv  417 (471)
T COG3033         343 LEE-AGVPIVQPAG---GHA-VFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELV  417 (471)
T ss_pred             HHh-cCCeeEecCC---Cce-EEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchhee
Confidence            986 7887652111   111 2222    12   112233 4666664 45776431 11    0          12359


Q ss_pred             EEeecCC-CCHHHHHHHHHHHHHHHH
Q 043610          403 RASIYNA-MPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       403 Ris~~~~-~t~edv~~ll~~L~~~~~  427 (430)
                      |+.+--. -|.+.+|-++++++++.+
T Consensus       418 RltipRrtYt~~HmD~V~~a~~~l~e  443 (471)
T COG3033         418 RLTIPRRTYTQTHMDFVIEAFKALKE  443 (471)
T ss_pred             eEeccccccchhHHHHHHHHHHHHHh
Confidence            9997663 468899999999988765

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=95.61  E-value=0.38  Score=50.40  Aligned_cols=286  Identities=12%  Similarity=0.103  Sum_probs=147.1

Q ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC
Q 043610          114 KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       114 ~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~  191 (430)
                      .+-+-...-.++++.|.|-. +--++ .-||.|-+++.+.. ..++.+.++-.+.+.-...+-..+..+ .+.++.    
T Consensus       162 LEsllNyQTmi~dlTGL~~a-NASLL-DEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~----  235 (1001)
T KOG2040|consen  162 LESLLNYQTMITDLTGLPMA-NASLL-DEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVV----  235 (1001)
T ss_pred             HHHHhhhHHhhhhccCCccc-chhhh-ccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEe----
Confidence            34444556788899998854 33344 34666667665554 345556443223332111111111111 111111    


Q ss_pred             CcCCCCCCccccc-cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc--ccccc--cEEEeCC
Q 043610          192 EKYTKIPNFDALE-QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV--DVTRF--GVIYAGA  263 (430)
Q Consensus       192 ~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--dl~~~--d~~~~s~  263 (430)
                            .|..+.. ...++..|.+..+.|. |.++|  ++.+. +..+.++++ ++ .+-+.-+  .-.+|  |+.++|+
T Consensus       236 ------~~~~~~~~s~~~v~gvlvQYP~t~-G~i~d~~el~~~a~~~~s~vv~-at-DLLaLtiLrpPgefGaDIavGSs  306 (1001)
T KOG2040|consen  236 ------SDIKEADYSSKDVSGVLVQYPDTE-GSVLDFDELVELAHANGSLVVM-AT-DLLALTILRPPGEFGADIAVGSS  306 (1001)
T ss_pred             ------cCHHHhhccccceeEEEEEcCCCC-CcccCHHHHHHHhhccCceEEE-ee-hhhHHHccCChhhcCceeeeccc
Confidence                  1111222 2355667777777664 88888  78876 555555443 21 1111111  11234  7899999


Q ss_pred             CccccCCc-----cEEEEEcHHHHhccCCCCC-cccc------ccchhhc-----CCCCCCccHH-HHHHH--HHHH-HH
Q 043610          264 QKNVGPSG-----VTIVIVRKDLLGNAQDKTP-LMLD------YKIHDEN-----NSLYNTPPCY-CIYMC--GLVF-EY  322 (430)
Q Consensus       264 ~K~~gp~G-----~g~l~v~~~~~~~~~~~~p-~~~~------~~~~~~~-----~~~~~T~~~~-~~~a~--~~al-~~  322 (430)
                      |.+-=|.|     .||+.+++++...+..+.- ..-|      |....+.     ...--|.|.- +++.+  ..|+ ..
T Consensus       307 QRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyai  386 (1001)
T KOG2040|consen  307 QRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAI  386 (1001)
T ss_pred             cccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhh
Confidence            98542655     5677777776544321100 0000      0000000     0001244422 22111  1222 11


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCee
Q 043610          323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGM  402 (430)
Q Consensus       323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~i  402 (430)
                      .-...|++++.+|...+...+..+|+. .|.++.  ++.+.- + +.+.+..  ...++..+..+++|-...  ...+.|
T Consensus       387 YHGp~gL~~IArrvh~~T~~l~~~l~~-aghel~--~k~fFD-T-LkI~~~~--s~~~~l~rA~~~~iNlr~--~ed~ti  457 (1001)
T KOG2040|consen  387 YHGPHGLKEIARRVHNLTLILAEGLKN-AGHELQ--HKPFFD-T-LKIRCGC--SAEEVLDRAAKRQINLRL--VEDGTI  457 (1001)
T ss_pred             hcCcHHHHHHHHHHHHHHHHHHHHHhh-cchhhc--cccccc-e-EEEEecC--cHHHHHHHHHhhcCceEE--eecCce
Confidence            111348999999999999999999996 676664  332222 1 3355543  123677777666654321  123457


Q ss_pred             EEeecCCCCHHHHHHHHHHHH
Q 043610          403 RASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       403 Ris~~~~~t~edv~~ll~~L~  423 (430)
                      -+|+--..+++|++.++..+.
T Consensus       458 gvslDETv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  458 GVSLDETVTEKDVDDLLWVFN  478 (1001)
T ss_pred             EEeecccccHHHHHHHHHHHc
Confidence            788887788999999998876

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=93.86  E-value=1.6  Score=42.80  Aligned_cols=173  Identities=8%  Similarity=0.019  Sum_probs=97.1

Q ss_pred             Cccc-cCCCcEEEEeccCcCCCC--------ccccccc-cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccc
Q 043610          228 YPSA-KNSTGILVADMSSNFCSK--------PVDVTRF-GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI  297 (430)
Q Consensus       228 i~~~-~~~g~~lvvD~a~s~G~~--------~idl~~~-d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~  297 (430)
                      +.++ +++|+.++||++|.-|.-        ..+++.- |++++  +|=+-..|   .+-.++++    +..| |.-|. 
T Consensus       297 Lrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTF--SKK~q~gG---ffh~~~fr----pn~p-YrifN-  365 (484)
T KOG1405|consen  297 LRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTF--SKKFQTGG---FFHDEEFR----PNEP-YRIFN-  365 (484)
T ss_pred             HHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceeh--hhhhhcCc---cccCcccC----CCch-HHHhh-
Confidence            5555 689999999999975542        2233322 45544  34443323   33333332    1112 11111 


Q ss_pred             hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcC
Q 043610          298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                           .|-|-|  .-...+.++++.+.+    +.+.+......+.++.+|.++    +|. +.  .-.-|. +-+.+..|
T Consensus       366 -----TWmGdP--~k~lll~~vv~~I~~----~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~-~~--~~RGrG-TF~a~d~p  430 (484)
T KOG1405|consen  366 -----TWMGDP--SKNLLLEEVVQEIKR----EDLLNNVAHVGKALLKGLLELQAKYPGK-IN--NLRGRG-TFIAWDCP  430 (484)
T ss_pred             -----hhcCCh--HHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHHHHHHhCchh-hh--cccccc-eEEEEeCC
Confidence                 122333  344556777777764    455666667777777777652    121 11  111133 33456777


Q ss_pred             CCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          374 KSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       374 ~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .......|+..++-.|+.+..  .....||+-+..--++...+-+++.|.++++.
T Consensus       431 s~~~Rdk~i~~~~~nGv~~GG--Cg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  431 SGSIRDKLILIARLNGVNLGG--CGDKSIRFRPSLVFRKHHADIFLDIFDKILAG  483 (484)
T ss_pred             ChHHHHHHHHHHHHcCceecc--cccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence            543344688888888988632  22224777666555788899999999988764

>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]

Probab=93.82  E-value=0.14  Score=53.46  Aligned_cols=270  Identities=12%  Similarity=0.115  Sum_probs=152.9

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhc-cCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNW-RGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQFA  148 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~~  148 (430)
                      .|++.+|-....+.-.+.......+. +.++.+   ..-++......++..|-.+-.+++.. .||++++ +. .|+|+.
T Consensus        22 ~yldhag~tl~sesq~~g~~~~sq~~e~~nphs---~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~l-p~-~t~al~   96 (728)
T KOG2142|consen   22 AYLDHAGRTLFSESQLEGVAFQSQSSENANPHS---HLGTSRSLARLVAQVRLRILALFNTTAFDYEVSL-PA-LTEALK   96 (728)
T ss_pred             HHHHhhhhhhhhhcccchhhhhhhccccCCCcc---cccchHHHHHHHHHHHHHHHHHhccccccccchh-HH-HHHHHH
Confidence            47777777666555555422222111 222222   23345667778888887778888874 4667766 45 999999


Q ss_pred             HHHhhcC--CCCCcEEEEeCChhHHHHH---HHHHHh-C-CceEE-ecCCCCcCC-CCCCccccccC-CCccEEEEeecC
Q 043610          149 AVPLNLC--TPNDPVDYIVTGSWGDKAF---KEAQKF-C-NPQVI-WSGKAEKYT-KIPNFDALEQN-PDAKYLHICANE  218 (430)
Q Consensus       149 ~~~~sl~--~~gd~vl~~~~g~~~~~~~---~~a~~~-g-~~~~v-~~~~~~~~g-~~~d~~~l~i~-~~~~lv~i~~~~  218 (430)
                      .++.++.  ..+.++.-+...++++-..   .+...+ | .+.-+ ...+  -|+ ....+.+...+ ....+.......
T Consensus        97 ~vae~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~--i~~~~~~sls~~~~~ls~~~L~~g~a~~  174 (728)
T KOG2142|consen   97 LVAEAFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNE--ISDSEEFSLSESEANLSEHSLFGGAAQS  174 (728)
T ss_pred             HHHHhCccccccccccchhhhhhcccccccceeeeeeeccceEEeeeeee--ccccccccccccccCcccchhcccchhc
Confidence            9999984  4566666555554443111   111111 1 11111 1110  011 00111111111 123455666667


Q ss_pred             CCccccCC-CCcc-cc-CCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCcc
Q 043610          219 TIHGVEFK-EYPS-AK-NSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLM  292 (430)
Q Consensus       219 t~tG~~~p-ei~~-~~-~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~  292 (430)
                      |..|..+. .|.. ++ ..+-++++|+++-..+-++|++.+  |+.-. +.|.|| |.| ++++.++-+-..-.+....+
T Consensus       175 nfeg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyetg-Avlv~~r~A~~~Ggkt~sa~  252 (728)
T KOG2142|consen  175 NFEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYETG-AVLVMNRSAELKGGKTASAE  252 (728)
T ss_pred             ccccceeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccch-heeecCCCch-hhHHHhhhhHhhcCccceee
Confidence            77777655 3333 44 556789999988777788888776  66666 999999 885 55554443332211222223


Q ss_pred             ccccch------hhcCCCCCCccHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHc
Q 043610          293 LDYKIH------DENNSLYNTPPCYCIYMCGLVFEYLLEL-GGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       293 ~~~~~~------~~~~~~~~T~~~~~~~a~~~al~~l~~~-~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      +.|...      .++....||.+.-.++.+...|..+.+. +++..+..+...+.+.++-.|+.
T Consensus       253 f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda  316 (728)
T KOG2142|consen  253 FSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDA  316 (728)
T ss_pred             cccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhh
Confidence            333321      1222334677777777777777655543 78888888888899988888875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	430
3qbo_A	364	Crystal Structure Of Phosphoserine Aminotransferase		1e-104
1bjo_A	360	The Structure Of Phosphoserine Aminotransferase Fro		6e-99
3qm2_A	386	2.25 Angstrom Crystal Structure Of Phosphoserine Am		8e-99
1bjn_A	360	Structure Of Phosphoserine Aminotransferase From Es		2e-98
3e77_A	377	Human Phosphoserine Aminotransferase In Complex Wit		3e-97
1bt4_A	362	Phosphoserine Aminotransferase From Bacillus Circul		6e-96
1w23_A	360	Crystal Structure Of Phosphoserine Aminotransferase		5e-94
2bie_A	361	Radiation Damage Of The Schiff Base In Phosphoserin		5e-94
3m5u_A	361	Crystal Structure Of Phosphoserine Aminotransferase		3e-75
2fyf_A	398	Structure Of A Putative Phosphoserine Aminotransfer		4e-09
2dr1_A	386	Crystal Structure Of The Ph1308 Protein From Pyroco		9e-08
3ffr_A	362	Crystal Structure Of A Phosphoserine Aminotransfera		2e-04

>pdb|3QBO|A Chain A, Crystal Structure Of Phosphoserine Aminotransferase From Yersinia Pestis Co92 Length = 364

Iteration: 1
 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/362 (51%), Positives = 238/362 (65%), Gaps = 4/362 (1%)
Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           +V+NF+AGPA LP +VL +AQ EL +W G G SVME+SHR KEF  + E++E DLR LLN
Sbjct: 6   QVYNFSAGPAMLPVEVLRRAQQELRDWHGLGTSVMEVSHRSKEFMQVAEESEKDLRDLLN 65
Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVI-WS 188
           +P  Y VLF  GGA  QFAAVPLNL    +  DY+  G W   A KEAQK+C P VI  +
Sbjct: 66  VPANYKVLFCHGGARAQFAAVPLNLLGDRNSADYVDGGYWAHSAIKEAQKYCTPNVIDVT 125
Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
                 T I      + + +A Y+H C NETI G+   E P   N   ++VAD SS+  S
Sbjct: 126 THDNGLTGIQPMKQWKLSDNAAYVHYCPNETIDGIAIDEQPDFGNK--VVVADFSSSILS 183
Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
           +P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A    P +LDYKI  +N+S++NTP
Sbjct: 184 RPIDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHTALPSILDYKILADNDSMFNTP 243
Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           P +  Y+ GLVF++L E GGL E+EK N+ KAELLY  ID   GFY+  V  + RS+MNV
Sbjct: 244 PTFAWYLSGLVFKWLKEQGGLGEMEKRNQAKAELLYGAID-RTGFYRNDVAITNRSWMNV 302
Query: 369 PFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
           PF +  + L            +  LKGHR  GGMRASIYNAMP+ GV+ L  FM DF+ +
Sbjct: 303 PFQMADASLDKLFLSEAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFERR 362
Query: 429 HA 430
           H 
Sbjct: 363 HG 364

>pdb|1BJO|A Chain A, The Structure Of Phosphoserine Aminotransferase From E. Coli In Complex With Alpha-Methyl-L-Glutamate Length = 360

Iteration: 1
 Score =  357 bits (917), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 179/362 (49%), Positives = 234/362 (64%), Gaps = 3/362 (0%)
Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN
Sbjct: 1   QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLN 60
Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           +P  Y VLF  GG   QFAAVPLN+       DY+  G W   A KEA+K+C P V  + 
Sbjct: 61  VPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAK 120
Query: 190 -KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
              +    +      + + +A Y+H C NETI G+   E P       ++ AD SS   S
Sbjct: 121 VTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADV-VVAADFSSTILS 179
Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
           +P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTP
Sbjct: 180 RPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTP 239
Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           P +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FY+  V K  RS MNV
Sbjct: 240 PTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKRNRSRMNV 298
Query: 369 PFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
           PF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +
Sbjct: 299 PFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERR 358
Query: 429 HA 430
           H 
Sbjct: 359 HG 360

>pdb|3QM2|A Chain A, 2.25 Angstrom Crystal Structure Of Phosphoserine Aminotransferase (Serc) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Length = 386

Iteration: 1
 Score =  357 bits (916), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 180/368 (48%), Positives = 236/368 (64%), Gaps = 3/368 (0%)
Query: 64  QSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESD 123
           QS    +VFNF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D
Sbjct: 21  QSNAMAQVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQD 80
Query: 124 LRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNP 183
            R LLNIP  Y VLF  GG   QFA VPLNL       DY+  G W   A KEA+K+C P
Sbjct: 81  FRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAP 140
Query: 184 QVIWSG-KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADM 242
           Q+I +    +    +      + + +A YLH C NETI G+   E P       ++ AD 
Sbjct: 141 QIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFGPEV-VVTADF 199
Query: 243 SSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENN 302
           SS   S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+
Sbjct: 200 SSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDND 259
Query: 303 SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV 362
           S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FY+  V ++ 
Sbjct: 260 SMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQAN 318
Query: 363 RSFMNVPFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM 422
           RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM
Sbjct: 319 RSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFM 378
Query: 423 KDFQAKHA 430
            DF+ +H 
Sbjct: 379 IDFERRHG 386

>pdb|1BJN|A Chain A, Structure Of Phosphoserine Aminotransferase From Escherichia Coli Length = 360

Iteration: 1
 Score =  355 bits (911), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 178/362 (49%), Positives = 233/362 (64%), Gaps = 3/362 (0%)
Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN
Sbjct: 1   QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLN 60
Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           +P  Y VLF  GG   QFAAVPLN+       DY+  G W   A KEA+K+C P V  + 
Sbjct: 61  VPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAK 120
Query: 190 -KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
              +    +      + + +A Y+H C NETI G+   E P       ++ AD SS   S
Sbjct: 121 VTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADV-VVAADFSSTILS 179
Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
           +P+DV+R+GVIYAGAQ N+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTP
Sbjct: 180 RPIDVSRYGVIYAGAQXNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTP 239
Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           P +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FY+  V K  RS MNV
Sbjct: 240 PTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKRNRSRMNV 298
Query: 369 PFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
           PF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +
Sbjct: 299 PFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERR 358
Query: 429 HA 430
           H 
Sbjct: 359 HG 360

>pdb|3E77|A Chain A, Human Phosphoserine Aminotransferase In Complex With Plp Length = 377

Iteration: 1
 Score =  352 bits (902), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 182/355 (51%), Positives = 235/355 (66%), Gaps = 9/355 (2%)
Query: 81  LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ 140
           LP  VLL+ Q EL +++G G+SV+EMSHR  +F  II   E+ +R LL +P  Y V+FLQ
Sbjct: 24  LPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQ 83
Query: 141 GGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIP 198
           GG   QF+AVPLNL         DY+VTG+W  KA +EA+KF    ++   K   YTKIP
Sbjct: 84  GGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHP-KLGSYTKIP 142
Query: 199 NFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGV 258
           +      NPDA Y++ CANET+HGVEF   P  K +  +LV DMSSNF SKPVDV++FGV
Sbjct: 143 DPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGA--VLVCDMSSNFLSKPVDVSKFGV 200
Query: 259 IYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGL 318
           I+AGAQKNVG +GVT+VIVR DLLG A  + P +L+YK+   N+SLYNTPPC+ IY+ GL
Sbjct: 201 IFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGL 260
Query: 319 VFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL--EKSD 376
           V E++   GG   +EK++  K++ +Y +ID S GFY CPVE   RS MN+PF +   K D
Sbjct: 261 VLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGD 320
Query: 377 --LXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 429
             L            M+ LKGHRSVGG+RAS+YNA+ +  V+KL AFMK F   H
Sbjct: 321 DALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375

>pdb|1BT4|A Chain A, Phosphoserine Aminotransferase From Bacillus Circulans Subsp. Alkalophilus Length = 362

Iteration: 1
 Score =  347 bits (891), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 167/358 (46%), Positives = 233/358 (65%), Gaps = 2/358 (0%)
Query: 69  DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL 128
           +R +NF AGPA LP +VL +AQ+E  +++ +GMS+MEMSHRG  ++++  +A++ L ALL
Sbjct: 3   ERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALL 62
Query: 129 NIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS 188
             P  Y VLF+QGGA+TQFA +P+N        +Y++TGSW  KA KEA+   +  V  S
Sbjct: 63  GNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAAS 122
Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
            +A  Y  +P    ++   +A YLH+ +NETI G +FK +P   +    L+ DMSS+  S
Sbjct: 123 SEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKAFPDTGSVP--LIGDMSSDILS 180
Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
           +P D+ +FG++YAGAQKN+GPSGVT+VIVR+DL+  +    P ML Y  + +NNSLYNTP
Sbjct: 181 RPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTP 240
Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           P + IYM   V +++ E GGL  V++ NRKKA L+Y+ ID S GFY+  V+   RS MN+
Sbjct: 241 PSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNI 300
Query: 369 PFTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426
            F L   +L             V LKGHRSVGG+RASIYNA+P    E LV FM+ F+
Sbjct: 301 TFRLASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFK 358

>pdb|1W23|A Chain A, Crystal Structure Of Phosphoserine Aminotransferase From Bacillus Alcalophilus Length = 360

Iteration: 1
 Score =  341 bits (874), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 165/357 (46%), Positives = 230/357 (64%), Gaps = 2/357 (0%)
Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           +VFNF AGP+ LP+  L +AQ EL N+  + MSVME+SHR + ++ + E+A++ LR LL 
Sbjct: 3   QVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ 62
Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP +Y +LFLQGGA+ QF  +P+NL T     +Y++TGSW +KA KEA+      +  S 
Sbjct: 63  IPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAAST 122
Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK 249
           KA  Y  IP+F   + N +  YLHI +N TI+G +++ +P   ++   L+ADMSS+  S+
Sbjct: 123 KANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFPEINHAP--LIADMSSDILSR 180
Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
           P+ V +FG+IYAGAQKN+GPSGVT+VIV+KDLL    ++ P ML Y  H +++SLYNTPP
Sbjct: 181 PLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPP 240
Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            + IYM   V +++ +LGG   + K N +KA+++Y+ ID SNGFY    EK  RS MNV 
Sbjct: 241 TFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVT 300
Query: 370 FTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426
           F L   +L             V L GHRSVGG RASIYNA+P+     L   M  F+
Sbjct: 301 FNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFK 357

>pdb|2BIE|A Chain A, Radiation Damage Of The Schiff Base In Phosphoserine Aminotransferase (Structure H) Length = 361

Iteration: 1
 Score =  341 bits (874), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 165/357 (46%), Positives = 230/357 (64%), Gaps = 2/357 (0%)
Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           +VFNF AGP+ LP+  L +AQ EL N+  + MSVME+SHR + ++ + E+A++ LR LL 
Sbjct: 4   QVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ 63
Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP +Y +LFLQGGA+ QF  +P+NL T     +Y++TGSW +KA KEA+      +  S 
Sbjct: 64  IPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAAST 123
Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK 249
           KA  Y  IP+F   + N +  YLHI +N TI+G +++ +P   ++   L+ADMSS+  S+
Sbjct: 124 KANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFPEINHAP--LIADMSSDILSR 181
Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
           P+ V +FG+IYAGAQKN+GPSGVT+VIV+KDLL    ++ P ML Y  H +++SLYNTPP
Sbjct: 182 PLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPP 241
Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            + IYM   V +++ +LGG   + K N +KA+++Y+ ID SNGFY    EK  RS MNV 
Sbjct: 242 TFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVT 301
Query: 370 FTLEKSDLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426
           F L   +L             V L GHRSVGG RASIYNA+P+     L   M  F+
Sbjct: 302 FNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFK 358

>pdb|3M5U|A Chain A, Crystal Structure Of Phosphoserine Aminotransferase From Campylobacter Jejuni Length = 361

Iteration: 1
 Score =  278 bits (712), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/364 (42%), Positives = 216/364 (59%), Gaps = 10/364 (2%)
Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           R  NF+AGP+ LP ++L +AQ EL +++G G S+ E+SHR K F+ +   A+   + L  
Sbjct: 5   RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIXEISHRTKVFEEVHFGAQEKAKKLYE 64
Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVIWS 188
           +  +Y VLFLQGGA+ QFA +P NL   N   +Y  TG W  KA KEAQ    N + + S
Sbjct: 65  LNDDYEVLFLQGGASLQFAXIPXNLAL-NGVCEYANTGVWTKKAIKEAQILGVNVKTVAS 123
Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
            +   +  IP    +E + +A Y +IC+N TI+G +++ YP  K     L+ D SS+F S
Sbjct: 124 SEESNFDHIPR---VEFSDNADYAYICSNNTIYGTQYQNYPKTKTP---LIVDASSDFFS 177
Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDK-TPLMLDYKIHDENNSLYNT 307
           + VD +   + Y G QKN G SG++ + +RKD L  +++K  P  L+Y  H EN SL+NT
Sbjct: 178 RKVDFSNIALFYGGVQKNAGISGLSCIFIRKDXLERSKNKQIPSXLNYLTHAENQSLFNT 237
Query: 308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367
           PP + IY   L  ++LL  GGL++V + N +KA  LY  ID SNGFYK   +K  RS  N
Sbjct: 238 PPTFAIYXFNLEXDWLLNQGGLDKVHEKNSQKATXLYECIDLSNGFYKGHADKKDRSLXN 297
Query: 368 VPFTLEKS-DLXXXXXXXXXXXXMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426
           V F + K+ DL             + LKGHR +GG+RASIYNA+ L  V+ L  F K+FQ
Sbjct: 298 VSFNIAKNKDLEPLFVKEAEEAGXIGLKGHRILGGIRASIYNALNLDQVKTLCEFXKEFQ 357
Query: 427 AKHA 430
            K+A
Sbjct: 358 GKYA 361

>pdb|2FYF|A Chain A, Structure Of A Putative Phosphoserine Aminotransferase From Mycobacterium Tuberculosis Length = 398

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 112/295 (37%), Gaps = 25/295 (8%)
Query: 62  QIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAE 121
           +I +  + R   F +GP+    KV L+   +L     +  ++   SHR    K+++ +  
Sbjct: 32  EIPTAIKPRDGRFGSGPS----KVRLE---QLQTLTTTAAALFGTSHRQAPVKNLVGRVR 84
Query: 122 SDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC 181
           S L  L ++P  Y V+   GGAT  + A    L        ++  G +  K      K  
Sbjct: 85  SGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKRSL--HLTYGEFSAKFASAVSK-- 140
Query: 182 NPQVIWSGKAEKYTKIPNFDALEQ-NPDAKYLHICANETIHGVEFKEYPSAKNSTGILVA 240
           NP V   G+    T  P      Q +P    +    NET  GV         +   ++V 
Sbjct: 141 NPFV---GEPIIITSDPGSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGSDDALVVI 197
Query: 241 DMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIV-------RKDLLGNAQDKTPLML 293
           D +S     PVD+      Y   QKN    G   + +       R + +       P  L
Sbjct: 198 DATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFL 257
Query: 294 DYKIHDEN---NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345
              I  EN   N  YNTP    + +     ++L+  GGL+   K     ++ LY+
Sbjct: 258 SLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYS 312

>pdb|2DR1|A Chain A, Crystal Structure Of The Ph1308 Protein From Pyrococcus Horikoshii Ot3 Length = 386

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 101 MSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDP 160
           M V   SHR KE++ +       LR  L + ++  VL +    T    A   N  +    
Sbjct: 39  MKVQMFSHRSKEYRKVHMDTVERLREFLEV-EKGEVLLVPSSGTGIMEASIRNGVSKGGK 97
Query: 161 VDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFD-ALEQNPDAKYLHICANET 219
           V   + G++G +  +  +      V+   +  K  K  + D AL +NPD + + I  NET
Sbjct: 98  VLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNET 157
Query: 220 IHGVEFKEYPS----AKNSTGILVADMSSNFCSKPVDVTRFG--VIYAGAQKNVG-PSGV 272
             GV     P     AK    ++  D  S      +   ++G  V+++ +QK  G P G+
Sbjct: 158 STGV-LNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGL 216
Query: 273 TIVIVRKDLLGNAQD--------KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL 324
            I    +  L  A+           PL + Y    E  S  +TPP   ++   +    + 
Sbjct: 217 AIGAFSERFLEIAEKMPERGWYFDIPLYVKY--LKEKESTPSTPPMPQVFGINVALRIIE 274
Query: 325 ELGGLNEVEKMNRKKAELL 343
           ++GG  +  +M  K+A+++
Sbjct: 275 KMGGKEKWLEMYEKRAKMV 293

>pdb|3FFR|A Chain A, Crystal Structure Of A Phosphoserine Aminotransferase Serc (chu_0995) From Cytophaga Hutchinsonii Atcc 33406 At 1.75 A Resolution Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 104/279 (37%), Gaps = 55/279 (19%)
Query: 106 MSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVD--- 162
           +SHR K+F+ + + A  +L+ LL +P  Y VLFL   + T+     +  C          
Sbjct: 34  ISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFL--ASATEIWERIIQNCVEKKSFHCVN 91
Query: 163 -------YIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHIC 215
                  Y   G  G +A+KE   F        G       +P         DA+ + + 
Sbjct: 92  GSFSKRFYEFAGELGREAYKEEAAFGK------GFYPADITVP--------ADAEIICLT 137
Query: 216 ANETIHGVE--------FKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNV 267
            NET  GV         F++    KN   ++  D  S+      D T+   ++   Q   
Sbjct: 138 HNETSSGVSXPVEDINTFRD----KNKDALIFVDAVSSLPYPKFDWTKIDSVFFSVQXCF 193
Query: 268 G-PSGVTIVIVR-------KDLLGNAQD-----KTPLMLDYKIHDENNSLYNTPPCYCIY 314
           G P+G+ + I+        K LL   +        P  L+       N    TP    I+
Sbjct: 194 GLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSXLE---KARVNQTPETPNAXNIF 250
Query: 315 MCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF 353
           + G V    L++   + + K   +KA L+   I+ S  F
Sbjct: 251 LLGKVTGDXLQISA-DGIRKQTEEKAALINTYIESSKVF 288

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	430
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	0.0
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	0.0
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	0.0
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	0.0
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	0.0
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	1e-176
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	1e-166
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	2e-21
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	3e-21
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	2e-16
1iug_A	352	Putative aspartate aminotransferase; wild type, py	1e-14
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	1e-13
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	3e-12
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	6e-12
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	6e-12
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	3e-11
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	5e-11
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	9e-11
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	3e-10
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	4e-10
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	3e-09
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	6e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A* Length = 362

 Score =  669 bits (1729), Expect = 0.0
 Identities = 173/361 (47%), Positives = 241/361 (66%), Gaps = 2/361 (0%)

Query: 69  DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL 128
           +R +NF AGPA LP +VL +AQ+E  +++ +GMS+MEMSHRG  ++++  +A++ L ALL
Sbjct: 3   ERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALL 62

Query: 129 NIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS 188
             P  Y VLF+QGGA+TQFA +P+N        +Y++TGSW  KA KEA+   +  V  S
Sbjct: 63  GNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAAS 122

Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
            +A  Y  +P    ++   +A YLH+ +NETI G +FK +P   +    L+ DMSS+  S
Sbjct: 123 SEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKAFPDTGSV--PLIGDMSSDILS 180

Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
           +P D+ +FG++YAGAQKN+GPSGVT+VIVR+DL+  +    P ML Y  + +NNSLYNTP
Sbjct: 181 RPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTP 240

Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           P + IYM   V +++ E GGL  V++ NRKKA L+Y+ ID S GFY+  V+   RS MN+
Sbjct: 241 PSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNI 300

Query: 369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
            F L   +LE EFVK + +E  V LKGHRSVGG+RASIYNA+P    E LV FM+ F+  
Sbjct: 301 TFRLASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS 360

Query: 429 H 429
            
Sbjct: 361 R 361

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A* Length = 360

 Score =  665 bits (1718), Expect = 0.0
 Identities = 167/359 (46%), Positives = 237/359 (66%), Gaps = 2/359 (0%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           +VFNF AGP+ LP+  L +AQ EL N+  + MSVME+SHR + ++ + E+A++ LR LL 
Sbjct: 3   QVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ 62

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP +Y +LFLQGGA+ QF  +P+NL T     +Y++TGSW +KA KEA+      +  S 
Sbjct: 63  IPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAAST 122

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK 249
           KA  Y  IP+F   + N +  YLHI +N TI+G +++ +P   ++   L+ADMSS+  S+
Sbjct: 123 KANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFPEINHA--PLIADMSSDILSR 180

Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
           P+ V +FG+IYAGAQKN+GPSGVT+VIV+KDLL    ++ P ML Y  H +++SLYNTPP
Sbjct: 181 PLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPP 240

Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            + IYM   V +++ +LGG   + K N +KA+++Y+ ID SNGFY    EK  RS MNV 
Sbjct: 241 TFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVT 300

Query: 370 FTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
           F L   +L  +F+ +A ++  V L GHRSVGG RASIYNA+P+     L   M  F+  
Sbjct: 301 FNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A* Length = 386

 Score =  658 bits (1701), Expect = 0.0
 Identities = 180/362 (49%), Positives = 240/362 (66%), Gaps = 3/362 (0%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           +VFNF++GPA LP +VL  AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN
Sbjct: 27  QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN 86

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP  Y VLF  GG   QFA VPLNL       DY+  G W   A KEA+K+C PQ+I + 
Sbjct: 87  IPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAPQIIDAK 146

Query: 190 -KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
              +    +      + + +A YLH C NETI G+   E P       ++ AD SS   S
Sbjct: 147 ITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFGPEV-VVTADFSSTILS 205

Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
            P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTP
Sbjct: 206 APLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTP 265

Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           P +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FY+  V ++ RS MNV
Sbjct: 266 PTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNV 324

Query: 369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
           PF L  + L+  F++E+    +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +
Sbjct: 325 PFQLADNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERR 384

Query: 429 HA 430
           H 
Sbjct: 385 HG 386

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens} Length = 377

 Score =  646 bits (1670), Expect = 0.0
 Identities = 184/376 (48%), Positives = 245/376 (65%), Gaps = 19/376 (5%)

Query: 70  RVFNFAAG----------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEK 119
              + ++G           + LP  VLL+ Q EL +++G G+SV+EMSHR  +F  II  
Sbjct: 3   HHHHHSSGVDLGTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINN 62

Query: 120 AESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEA 177
            E+ +R LL +P  Y V+FLQGG   QF+AVPLNL         DY+VTG+W  KA +EA
Sbjct: 63  TENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEA 122

Query: 178 QKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGI 237
           +KF    ++   K   YTKIP+      NPDA Y++ CANET+HGVEF   P  K +  +
Sbjct: 123 KKFGTINIVHP-KLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGA--V 179

Query: 238 LVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI 297
           LV DMSSNF SKPVDV++FGVI+AGAQKNVG +GVT+VIVR DLLG A  + P +L+YK+
Sbjct: 180 LVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKV 239

Query: 298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP 357
              N+SLYNTPPC+ IY+ GLV E++   GG   +EK++  K++ +Y +ID S GFY CP
Sbjct: 240 QAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCP 299

Query: 358 VEKSVRSFMNVPFTLEKS----DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA 413
           VE   RS MN+PF +  +     LE  F+ +A +  M+ LKGHRSVGG+RAS+YNA+ + 
Sbjct: 300 VEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIE 359

Query: 414 GVEKLVAFMKDFQAKH 429
            V+KL AFMK F   H
Sbjct: 360 DVQKLAAFMKKFLEMH 375

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} Length = 361

 Score =  645 bits (1667), Expect = 0.0
 Identities = 163/364 (44%), Positives = 231/364 (63%), Gaps = 10/364 (2%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           R  NF+AGP+ LP ++L +AQ EL +++G G S+ME+SHR K F+ +   A+   + L  
Sbjct: 5   RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE 64

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS 188
           +  +Y VLFLQGGA+ QFA +P+NL   N   +Y  TG W  KA KEAQ    N + + S
Sbjct: 65  LNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVAS 123

Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
            +   +  IP  +    + +A Y +IC+N TI+G +++ YP    +   L+ D SS+F S
Sbjct: 124 SEESNFDHIPRVE---FSDNADYAYICSNNTIYGTQYQNYP---KTKTPLIVDASSDFFS 177

Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDK-TPLMLDYKIHDENNSLYNT 307
           + VD +   + Y G QKN G SG++ + +RKD+L  +++K  P ML+Y  H EN SL+NT
Sbjct: 178 RKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNT 237

Query: 308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN 367
           PP + IYM  L  ++LL  GGL++V + N +KA +LY  ID SNGFYK   +K  RS MN
Sbjct: 238 PPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMN 297

Query: 368 VPFTLEKS-DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 426
           V F + K+ DLE  FVKEA +  M+ LKGHR +GG+RASIYNA+ L  V+ L  FMK+FQ
Sbjct: 298 VSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQ 357

Query: 427 AKHA 430
            K+A
Sbjct: 358 GKYA 361

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A* Length = 398

 Score =  497 bits (1283), Expect = e-176
 Identities = 77/405 (19%), Positives = 138/405 (34%), Gaps = 31/405 (7%)

Query: 39  NTKRAISVTCSAASAPTQDRTAAQIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRG 98
           +   + S+   A     Q     +I +  + R   F +GP+ +  + L            
Sbjct: 9   HHLESTSLYKKAGFMADQLTPHLEIPTAIKPRDGRFGSGPSKVRLEQL-------QTLTT 61

Query: 99  SGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN 158
           +  ++   SHR    K+++ +  S L  L ++P  Y V+   GGAT  + A    L   +
Sbjct: 62  TAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI--D 119

Query: 159 DPVDYIVTGSWGDKAF---KEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHIC 215
               ++  G +  K      +      P +I S         P     + +P    +   
Sbjct: 120 KRSLHLTYGEFSAKFASAVSKNPFVGEPIIITS----DPGSAPE---PQTDPSVDVIAWA 172

Query: 216 ANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTI 274
            NET  GV         +   ++V D +S     PVD+      Y   QKN     G+ +
Sbjct: 173 HNETSTGVAVAVRRPEGSDDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWL 232

Query: 275 VIVRKDLL------GNAQDKTPLMLDYKIHDEN---NSLYNTPPCYCIYMCGLVFEYLLE 325
            I+    L             P  L   I  EN   N  YNTP    + +     ++L+ 
Sbjct: 233 AIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVG 292

Query: 326 LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA 385
            GGL+   K     ++ LY+             +  +RS +                K  
Sbjct: 293 NGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKIL 352

Query: 386 AKEKMVQLKGHRSVG--GMRASIYNAMPLAGVEKLVAFMKDFQAK 428
               +V  + +R +G   +R +++ A+    V  L   +     +
Sbjct: 353 RANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406} Length = 362

 Score =  471 bits (1214), Expect = e-166
 Identities = 73/371 (19%), Positives = 133/371 (35%), Gaps = 27/371 (7%)

Query: 69  DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL 128
           +    F  GP+ L   V     + L         +  +SHR K+F+ + + A  +L+ LL
Sbjct: 3   NNKIYFTPGPSELYPTVRQHMITAL------DEKIGVISHRSKKFEEVYKTASDNLKTLL 56

Query: 129 NIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS 188
            +P  Y VLFL    T  +  +  N         + V GS+  + ++ A +         
Sbjct: 57  ELPSNYEVLFLASA-TEIWERIIQNCV--EKKSFHCVNGSFSKRFYEFAGELG---REAY 110

Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAK----NSTGILVADMSS 244
            +   + K      +    DA+ + +  NET  GV             N   ++  D  S
Sbjct: 111 KEEAAFGKGFYPADITVPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVS 170

Query: 245 NFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKT------PLMLDYKI 297
           +      D T+   ++   QK  G P+G+ + I+   ++  ++                 
Sbjct: 171 SLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPS 230

Query: 298 ---HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY 354
                  N    TP    I++ G V   +L+    + + K   +KA L+   I+ S  F 
Sbjct: 231 MLEKARVNQTPETPNAMNIFLLGKVTGDMLQ-ISADGIRKQTEEKAALINTYIESSKVFS 289

Query: 355 KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAG 414
               +  +RS   +         E   + E     +    G +    +R + + A  L  
Sbjct: 290 FGVEDAKLRSMTTIVANTTMLPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQ 349

Query: 415 VEKLVAFMKDF 425
           V KLV  +K+ 
Sbjct: 350 VHKLVQTLKEK 360

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3 Length = 366

 Score = 94.6 bits (236), Expect = 2e-21
 Identities = 52/301 (17%), Positives = 98/301 (32%), Gaps = 65/301 (21%)

Query: 77  GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSV 136
           GP      V               M     +        ++E+    L AL    + Y+ 
Sbjct: 11  GPLTTSRTVKEA------------MLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTS 58

Query: 137 LFLQGGATTQFA--AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSGK 190
           + LQG  +  +A  AV  +   P D V  +  G++G +  + A                 
Sbjct: 59  VLLQGSGS--YAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE-VA 115

Query: 191 AEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGIL------------ 238
                 I     L  +P   ++ +  +ET              +TG+L            
Sbjct: 116 RPDVQAID--AILNADPTISHIAMVHSET--------------TTGMLNPIDEVGALAHR 159

Query: 239 -----VAD-MSSNFCSKPVDVTRFGV--IYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKT 289
                + D MSS F   P+D+    +  + + A K + G  G   VI R+  L   +  +
Sbjct: 160 YGKTYIVDAMSS-FGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHS 218

Query: 290 P-----LMLDYKIHDENNSLY-NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL 343
                 L   ++  ++N+  +  T P + +       + L + GG+    +  ++    L
Sbjct: 219 RSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSL 278

Query: 344 Y 344
            
Sbjct: 279 V 279

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale} Length = 376

 Score = 93.5 bits (233), Expect = 3e-21
 Identities = 54/290 (18%), Positives = 103/290 (35%), Gaps = 38/290 (13%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
           F  GP    E+V                +      R  EF S + + E  +      P+ 
Sbjct: 23  FTVGPVMSSEEVRAI------------GAEQVPYFRTTEFSSTMLENEKFMLEYAKAPEG 70

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVIWSGKAE 192
              +F+   +T    AV +N  T  D V  I  GS+G +  +  +        +   K E
Sbjct: 71  SKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVAL---KLE 127

Query: 193 KYTKIPNFDALEQ--NPDAKYLHICANETIHGV-----EFKEYPSAKNSTGILVAD-MSS 244
            + K    + L +  N +   L +  +ET   V        E+   K +    V D +S+
Sbjct: 128 -HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEF--CKKNNMFFVCDCVSA 184

Query: 245 NFCSKPVDVTRFG--VIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPL------MLDY 295
            F + P ++   G  V+  G+QK +  P G++++++    +    +K+ +      + D 
Sbjct: 185 -FLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGV-ERVEKSKVRTMYFDLKDA 242

Query: 296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345
             + E      TP    +       + + + GG +        +A     
Sbjct: 243 LKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRA 292

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii} Length = 386

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 68/291 (23%), Positives = 111/291 (38%), Gaps = 38/291 (13%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
           F AGP     +VL              M V   SHR KE++ +       LR  L + + 
Sbjct: 24  FTAGPVACFPEVLEI------------MKVQMFSHRSKEYRKVHMDTVERLREFLEVEKG 71

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
             VL +    T    A   N  +    V   + G++G +  +  +       V+     G
Sbjct: 72  -EVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP-G 129

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSNF 246
           KA K   +   DAL +NPD + + I  NET  GV     E          L   D  S  
Sbjct: 130 KAVKPEDLD--DALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAM 187

Query: 247 CSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTP---------LMLD 294
               +   ++G  V+++ +QK  G P G+ I    +  L    +K P         L + 
Sbjct: 188 GGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFL-EIAEKMPERGWYFDIPLYVK 246

Query: 295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345
           Y    E  S  +TPP   ++   +    + ++GG  +  +M  K+A+++  
Sbjct: 247 Y--LKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVRE 295

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3 Length = 352

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 60/303 (19%), Positives = 102/303 (33%), Gaps = 47/303 (15%)

Query: 77  GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSV 136
           GP  L  K L              ++  ++ HR +  + +  KA   LR       E  V
Sbjct: 8   GPVRLHPKALEA------------LARPQLHHRTEAAREVFLKARGLLREAFRTEGE--V 53

Query: 137 LFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSGKAE 192
           L L G  T    A+  NL  P + V   V G + ++ ++ A +     + +   + G   
Sbjct: 54  LILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPY-GDT- 111

Query: 193 KYTKIPNFDALEQNPDAKYLHICANETIHGV-----EFKEYPSAKNSTGILVADMSSNFC 247
                P  + + +      L +  +ET  G              KN  G++ ADM ++  
Sbjct: 112 -----PRPEDVAK-EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLL 165

Query: 248 SKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPL------MLDYKIH 298
              V +   G     +G+QK +  P G+  V +       A ++         +      
Sbjct: 166 VGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPR----ALERLKPRGYYLDLARELKA 221

Query: 299 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV 358
            +      TP    +     V E +L    L E   +   +  LLY V +   G    P 
Sbjct: 222 QKEGESAWTPAINLVLAVAAVLEEVLP--RLEEHLALKAWQNALLYGVGE-EGGLRPVPK 278

Query: 359 EKS 361
             S
Sbjct: 279 RFS 281

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A* Length = 392

 Score = 71.1 bits (175), Expect = 1e-13
 Identities = 38/214 (17%), Positives = 79/214 (36%), Gaps = 27/214 (12%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
             AGP N   +VL +            +    +      F+ + EK     +  + +  +
Sbjct: 13  LTAGPVNAYPEVL-RG-----------LGRTVLYDYDPAFQLLYEKVVDKAQKAMRLSNK 60

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
              + L G       A   +L +P+D V  + +G +G      A+++  +   I   +  
Sbjct: 61  --PVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY-N 117

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSNF 246
           +A     +   D L+ +P+   + +C ++T  G         +  ++ G   + D  S+F
Sbjct: 118 EAIDPQAVA--DMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSF 175

Query: 247 CSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIV 277
                        +   G  K +G P G+T++ V
Sbjct: 176 GGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGV 209

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A* Length = 353

 Score = 66.5 bits (163), Expect = 3e-12
 Identities = 52/284 (18%), Positives = 93/284 (32%), Gaps = 32/284 (11%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP  +PE+V               +      H   E   +    +  L AL +  + 
Sbjct: 4   LTPGPTPIPERVQKA------------LLRPMRGHLDPEVLRVNRAIQERLAALFDPGEG 51

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
             V  L G  +    A   NL     PV  +V G++  +  + A     +P+V+     G
Sbjct: 52  ALVAALAGSGSLGMEAGLANL--DRGPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPP-G 108

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSNF 246
           +      +    AL++    + + +   ET  GV    +   +     G L   D  +  
Sbjct: 109 EPVDPEAVA--RALKRR-RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTL 165

Query: 247 CSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHD---E 300
              P  +   G    + G+QK +  P G+  +    +       K    LD        E
Sbjct: 166 GMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWE 225

Query: 301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY 344
               ++T P    Y      + +LE  G+   E+  R+    + 
Sbjct: 226 RGGYHHTTPVLLHYALLEALDLVLE-EGVAARERRAREVYAWVL 268

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A* Length = 393

 Score = 65.7 bits (161), Expect = 6e-12
 Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 27/214 (12%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP+N P++VL  A           MS   + H   E   I++  +  +R L      
Sbjct: 23  MGPGPSNAPQRVL-DA-----------MSRPILGHLHPETLKIMDDIKEGVRYLFQTNNI 70

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
                L         A   NL    D +    TG WGD++   A ++  + +V+     G
Sbjct: 71  A-TFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV-G 128

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSNF 246
           ++    +I   DAL  +     L +   ++  GV    +   +  +    L + D  ++ 
Sbjct: 129 QSLSLDEIR--DALLIHKP-SVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASL 185

Query: 247 CSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIV 277
              P+ + R+    +Y G+QK +G P G+T V  
Sbjct: 186 GGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSF 219

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A* Length = 384

 Score = 65.7 bits (161), Expect = 6e-12
 Identities = 59/342 (17%), Positives = 121/342 (35%), Gaps = 47/342 (13%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP  + E VL+                  +    KEF   +  +   LR ++   + 
Sbjct: 6   LHVGPTTIKEDVLVA------------GLENNVGFTSKEFVEALAYSLKGLRYVMGASKN 53

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
           Y  L + GG T+   +V  +L  PND +  +  G +GD+  +  +++  N +V+     G
Sbjct: 54  YQPLIIPGGGTSAMESV-TSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSP-G 111

Query: 190 KAEKYTKIPNFDALEQ---NPDAKYLHICANETIHGV--EFKEY-PSAKNSTGILVADMS 243
                        +E+     + K + +   ET  GV    K+     +    ++V D  
Sbjct: 112 DY------VKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGV 165

Query: 244 SNFCSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIV----------RKDLLGNAQDKTP 290
           S+  ++ V    +   V    +QK +G  +G+ ++++          +  + G   D   
Sbjct: 166 SSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRN 225

Query: 291 LMLDYKIHDENNSLY-NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG 349
            +   +  +E  + Y  TPP + I      F  + +  G+    K +   A  +   ++ 
Sbjct: 226 WLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEK-EGIENRIKRHTMVASAIRAGLEA 284

Query: 350 SNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMV 391
             G           S       L+ +D   + +     E + 
Sbjct: 285 L-GLEIVARRPESYSNTVTGVILKVAD-PQKVLAGTVNEGVE 324

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis} Length = 416

 Score = 63.9 bits (156), Expect = 3e-11
 Identities = 39/217 (17%), Positives = 71/217 (32%), Gaps = 33/217 (15%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP  +  +VL +            MS   +      F  I+ +    LR L      
Sbjct: 15  MTPGPVEVDPRVL-RV-----------MSTPVVGQFDPAFTGIMNETMEMLRELFQTKNR 62

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
           +    + G +     AV  ++  P D V   + G +G    + A+++  N  ++   W G
Sbjct: 63  W-AYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW-G 120

Query: 190 KAEKYTKIPNFDALEQ---NPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMS 243
                    + + + +       K + +   ET  G     K    A  +   L + D  
Sbjct: 121 TV------FDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAV 174

Query: 244 SNFCSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIV 277
           +      V V  +       G QK +  PSG+  +  
Sbjct: 175 ATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITY 211

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3 Length = 393

 Score = 63.1 bits (154), Expect = 5e-11
 Identities = 44/214 (20%), Positives = 82/214 (38%), Gaps = 27/214 (12%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP+N    VL +A           M+V  + H    F +++++ +S LR +      
Sbjct: 38  LGPGPSNAHPSVL-QA-----------MNVSPVGHLDPAFLALMDEIQSLLRYVWQTENP 85

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
              + + G  T    A   N   P D V   V G +G++    A ++  + + I   W G
Sbjct: 86  L-TIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPW-G 143

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSNF 246
           +     ++    ALE +     L +   ET  G     +         G L + D  ++ 
Sbjct: 144 EVFSLEELR--TALETHRP-AILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSL 200

Query: 247 CSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIV 277
              P+ +  +G  + Y+ +QK +G   G +   +
Sbjct: 201 GGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTM 234

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A* Length = 396

 Score = 62.3 bits (152), Expect = 9e-11
 Identities = 41/214 (19%), Positives = 85/214 (39%), Gaps = 27/214 (12%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP+N  ++VL  A           M+   +S+   E    +++ +  LR +      
Sbjct: 22  MGPGPSNCSKRVL-TA-----------MTNTVLSNFHAELFRTMDEVKDGLRYIFQTENR 69

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
              + + G A     A+  NL    D V   V G W ++A + ++++  + + I      
Sbjct: 70  A-TMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPP-D 127

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSNF 246
           +      +    A+E +   K L +   ++  G+    +      +    L + D  ++ 
Sbjct: 128 RPFSLETLA--RAIELH-QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASL 184

Query: 247 CSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIV 277
           C  P  + ++    +Y GAQK +G P G+T + +
Sbjct: 185 CGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISI 218

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae} Length = 411

 Score = 60.7 bits (148), Expect = 3e-10
 Identities = 38/214 (17%), Positives = 76/214 (35%), Gaps = 27/214 (12%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP N   +VL +A           MS   +          + +  +  R +      
Sbjct: 17  MGPGPINADPRVL-RA-----------MSSQLIGQYDPAMTHYMNEVMALYRGVFRTENR 64

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
           +  + + G +     A+ ++   P D V   V G +G    + A++       I   W G
Sbjct: 65  W-TMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPW-G 122

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSNF 246
           +     ++   DA+++    + L     +T   +     E          L   D +++ 
Sbjct: 123 EVFTPDQVE--DAVKRIRP-RLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASL 179

Query: 247 CSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIV 277
              P++   +G   + AG QK +G PSG + + +
Sbjct: 180 GGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITL 213

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A* Length = 393

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 39/214 (18%), Positives = 78/214 (36%), Gaps = 27/214 (12%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP+NL  +VL               S+  + H  KE   I+E+ +  ++ +      
Sbjct: 27  LGPGPSNLAPRVLAA------------GSLRMIGHMQKEMLQIMEEIKQGIQYVFQTRNP 74

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVI---WSG 189
              L + G           NL  P D       G WG +A + A +       +     G
Sbjct: 75  L-TLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKP-G 132

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGV--EFKEYPSAKNSTGIL-VADMSSNF 246
           +     ++   + L Q+     L +   E+  GV      +    +    L + D  ++ 
Sbjct: 133 EHYTLQEVE--EGLAQHKP-VLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASL 189

Query: 247 CSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIV 277
              P+ + + G  ++Y+ +QK +  P G++++  
Sbjct: 190 GGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISF 223

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3 Length = 385

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 52/320 (16%), Positives = 104/320 (32%), Gaps = 48/320 (15%)

Query: 77  GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEY 134
           GP  L   V               + V  + H   EF SI ++   + RA+       + 
Sbjct: 12  GPIILSGAVQKA------------LDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKS 59

Query: 135 SVLFLQGGATTQFAAVPLNL---CTPNDPVDYIVTGSWGDKAFKEAQKF-CNPQVIWS-- 188
               L G  T  +     N      PN  V  + TG++ D+     + +     V+    
Sbjct: 60  QPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLK 119

Query: 189 -GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGV-----EFKEYPSAKNSTGILVADM 242
            G++     I   + L QN     + +   +T   V        +     +     V D 
Sbjct: 120 IGESVPLELIT--EKLSQNSY-GAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDA 176

Query: 243 SSNFCSKPVDVTRFG--VIYAGAQKNVG-PSGVTIVIVRK---DLLGNAQDKTPLM---L 293
             +   +  +   +G       +QK +G P+G++I +      D   N      +     
Sbjct: 177 VCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFS 236

Query: 294 DYKIHDENNSLYN--------TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345
             +        Y         TPP   I    +  + +LE  GL++   ++R+ ++   +
Sbjct: 237 SLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILE-EGLHKRWDLHREMSDWFKD 295

Query: 346 -VIDGSNGFYKCPVEKSVRS 364
            +++G           ++ +
Sbjct: 296 SLVNGLQLTSVSRYPSNMSA 315

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4} Length = 379

 Score = 56.7 bits (137), Expect = 6e-09
 Identities = 36/223 (16%), Positives = 74/223 (33%), Gaps = 31/223 (13%)

Query: 76  AGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYS 135
           A   ++    LL+             +   ++H  K F+ ++    S+L+ +       +
Sbjct: 4   ALRQDIDPNGLLEYSVV--------YTDRALNHMSKAFQEVMNDLLSNLKTVY---NAEA 52

Query: 136 VLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYT 195
            + + G  T    AV     T ++    I  G +  +  +  +K    +      AE+  
Sbjct: 53  AVIIPGSGTYGMEAV-ARQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTE 111

Query: 196 KIPNF---------DALEQNPDAKYLHICA--NETIHGV-----EFKEYPSAKNSTG-IL 238
                          A+ +  + K   + A   ET  G+       K    A +S G +L
Sbjct: 112 DTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLL 171

Query: 239 VAD-MSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVIVRK 279
           V D ++S      +      V+ +  QK         +V++  
Sbjct: 172 VIDCIASGCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSA 214

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 55/315 (17%), Positives = 94/315 (29%), Gaps = 95/315 (30%)

Query: 7   SPHSLFLQNRNSHPLN--------KNNLASFTNLKKINFFNTKRAISVTCSAASAPTQDR 58
            P  L  +   ++P          ++ LA++ N K +N       I         P + R
Sbjct: 314 RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES-SLNVLEPAEYR 372

Query: 59  TAAQIQSGQEDRVF-NFAAGP--ANLPEKVLLKAQSELYNWRGSG----MSVMEMSHRGK 111
                      ++F   +  P  A++P  +L      L  W        M V+   H+  
Sbjct: 373 -----------KMFDRLSVFPPSAHIPTILL-----SLI-WFDVIKSDVMVVVNKLHK-- 413

Query: 112 EFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF-----------AAVPLNLCTPNDP 160
              S++EK   +    ++IP  Y  L ++                       +   P   
Sbjct: 414 --YSLVEKQPKEST--ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP-PY 468

Query: 161 VD-----YIV--------TGSWG-------DKAFKEAQKFCNPQVIWSGKAEKYTKIPNF 200
           +D     +I                     D  F E QK  +    W+            
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE-QKIRHDSTAWNASG------SIL 521

Query: 201 DALEQNPDAKYL-HICANETIHGVEFKEYPSAKNSTGILVADMSSN-FCSKPVDVTRF-- 256
           + L+Q     Y  +IC N+        +Y    N+    +  +  N  CSK  D+ R   
Sbjct: 522 NTLQQL--KFYKPYICDNDP-------KYERLVNAILDFLPKIEENLICSKYTDLLRIAL 572

Query: 257 ----GVIYAGAQKNV 267
                 I+  A K V
Sbjct: 573 MAEDEAIFEEAHKQV 587

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	430
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	100.0
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	100.0
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	100.0
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	100.0
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	100.0
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	100.0
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	100.0
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	100.0
1iug_A	352	Putative aspartate aminotransferase; wild type, py	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	100.0
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	100.0
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	100.0
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	100.0
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	100.0
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	100.0
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	100.0
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	100.0
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	100.0
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	100.0
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	100.0
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	100.0
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	100.0
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	100.0
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	100.0
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	100.0
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.97
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.97
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.96
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.96
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.96
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.96
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.95
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.95
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.95
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.95
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.95
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.95
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.95
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.95
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.95
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.95
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.95
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.95
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.95
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.94
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.94
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.94
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.94
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.94
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.94
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.94
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.94
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.94
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.94
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.94
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.94
1svv_A	359	Threonine aldolase; structural genomics, structura	99.94
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.94
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.94
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.94
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.94
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.94
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.94
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.94
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.94
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.94
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.94
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.93
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.93
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.93
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.93
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.93
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.93
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.93
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.93
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.93
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.93
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.93
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.93
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.93
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.93
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.93
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.93
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.93
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.93
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.93
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.93
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.93
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.92
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.92
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.92
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.92
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.92
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.92
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.92
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.92
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.92
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.92
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.92
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.92
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.92
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.92
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.92
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.92
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.92
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.92
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.92
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.92
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.91
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.91
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.91
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.91
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.91
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.91
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.91
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.91
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.91
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.91
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.9
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.9
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.9
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.9
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.9
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.9
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.9
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.9
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.9
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.9
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.9
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.89
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.89
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.89
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.89
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.89
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.89
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.89
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.88
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.88
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.88
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.88
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.88
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.88
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.88
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.87
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.87
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.87
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.87
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.87
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.87
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.87
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.87
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.87
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.87
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.86
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.86
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.86
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.86
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.77
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.86
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.86
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.86
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.86
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.86
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.86
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.86
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.85
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.85
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.85
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.85
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.85
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.85
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.85
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.84
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.84
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.84
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.84
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.84
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.83
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.82
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.82
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.82
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.81
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.81
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.81
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.8
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.8
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.8
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.8
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.8
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.8
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.79
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.79
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.79
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.78
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.78
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.78
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.78
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.76
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.76
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.76
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.76
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.75
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.75
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.74
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.74
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.74
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.74
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.74
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.74
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.73
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.72
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.72
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.71
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.71
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.71
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.7
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.69
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.69
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.68
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.67
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.66
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.64
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.54
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.24
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.43
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.2
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.17
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	98.89
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	98.75

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=100.00  E-value=6.9e-58  Score=453.85  Aligned_cols=354  Identities=45%  Similarity=0.749  Sum_probs=310.8

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+++|||+|||+++|++|+++|.+++.+++++|.|.++++|+++++.++++++|+.+++++|++++++|+|+|+|+|+++
T Consensus         3 ~~~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~   82 (361)
T 3m5u_A            3 AMRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQF   82 (361)
T ss_dssp             -CCCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             ccceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHH
Confidence            35899999999999999999999999888899999998899999999999999999999999986568998789999999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCC-CCccccccCCCccEEEEeecCCCccccC
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKI-PNFDALEQNPDAKYLHICANETIHGVEF  225 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~-~d~~~l~i~~~~~lv~i~~~~t~tG~~~  225 (430)
                      ++++.+++ +||+++++.++.|+++|...+++.| ++++++...+   +.. +++++ +++++|++|+++|++|.||+++
T Consensus        83 n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~---g~~~~~~~~-~l~~~t~lv~~~~~e~~tG~~~  157 (361)
T 3m5u_A           83 AMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEE---SNFDHIPRV-EFSDNADYAYICSNNTIYGTQY  157 (361)
T ss_dssp             HHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTT---TTSCSCCCC-CCCTTSSEEEEESEETTTTEEC
T ss_pred             HHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccC---cCCCcCChh-hcCCCCCEEEEeCCCCCcceeC
Confidence            99999998 8999988889999999999999998 9888887532   211 23333 3678999999999999999999


Q ss_pred             CCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCC-CCCccccccchhhcCCC
Q 043610          226 KEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQD-KTPLMLDYKIHDENNSL  304 (430)
Q Consensus       226 pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~-~~p~~~~~~~~~~~~~~  304 (430)
                      |+|++   +|++++||++|++|++|+|++++|++++|+|||+||+|+|++|+++++++.+.+ ..|.+++|....+.+.+
T Consensus       158 ~~i~~---~~~~~~vD~~q~~g~~~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  234 (361)
T 3m5u_A          158 QNYPK---TKTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSL  234 (361)
T ss_dssp             SSCCC---CSSCEEEECGGGTTSSCCCCTTEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTC
T ss_pred             Ccccc---cCCEEEEEcccccCCCCCCcccCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCC
Confidence            87554   499999999999999999999999999999999999999999999999988766 56778877665566778


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc-eecCCCCCCCccceEEEEcCC-CchhHHHH
Q 043610          305 YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF-YKCPVEKSVRSFMNVPFTLEK-SDLEAEFV  382 (430)
Q Consensus       305 ~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~-~~~~~~~~~rs~~iv~f~~~~-~~~~~~~~  382 (430)
                      +||||+++++++.+||+++.+++|++++.+|+++++++++++|++..|+ .+. .++..|++++++|.+++ .+.+.++.
T Consensus       235 ~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~-~~~~~rs~~ivsf~~~~~~~~~~~~~  313 (361)
T 3m5u_A          235 FNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGH-ADKKDRSLMNVSFNIAKNKDLEPLFV  313 (361)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEES-SCGGGBCSSEEEEEESSCTTHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeecc-CCHHHcCCeEEEEECCCchhhhHHHH
Confidence            8999999999999999999865589999999999999999999974445 554 34556888899999985 34455788


Q ss_pred             HHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          383 KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       383 ~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      ..|.++||.+..|++..+++|||+++|+|++||++++++|+++.++|+
T Consensus       314 ~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~~~  361 (361)
T 3m5u_A          314 KEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGKYA  361 (361)
T ss_dssp             HHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHhcC
Confidence            899999999998988778899999999999999999999999999885

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=100.00  E-value=6.3e-59  Score=465.31  Aligned_cols=356  Identities=50%  Similarity=0.866  Sum_probs=285.2

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      .++|||+|||+++|++|+++|.+++.+++++|+|.++++|+++++.++++++|+.+++++|++++++|+|+++|+|++++
T Consensus        26 ~~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n  105 (386)
T 3qm2_A           26 AQVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFA  105 (386)
T ss_dssp             -CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHH
T ss_pred             ccCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHH
Confidence            56899999999999999999999998888899998888999999999999999999999999765689987899999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc-C
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE-F  225 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~-~  225 (430)
                      +++.+++++||+++++.+++|+++|...+++.|++.+++... .++|..+++++++  ++++|++|+++|++|.||++ +
T Consensus       106 ~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G~v~~v~~~~-~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~  184 (386)
T 3qm2_A          106 GVPLNLLGDKTTADYVDAGYWAASAIKEAKKYCAPQIIDAKI-TVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAID  184 (386)
T ss_dssp             HHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEE-EETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECC
T ss_pred             HHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhCCeEEEecCc-ccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecC
Confidence            999999999999999999999999998888888666666640 0155335667776  78999999999999999997 6


Q ss_pred             C--CCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCC
Q 043610          226 K--EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNS  303 (430)
Q Consensus       226 p--ei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~  303 (430)
                      |  +|+    +|++++||++|++|++|+|++++|++++|+|||+||+|+|++|+++++++.+.+..|.+++|....+.+.
T Consensus       185 pi~~i~----~g~~~~vDa~qs~g~~pidv~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~  260 (386)
T 3qm2_A          185 ETPDFG----PEVVVTADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDS  260 (386)
T ss_dssp             CCCCCC----TTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC--
T ss_pred             chhhhc----CCCEEEEEcccccCCCCCCccccCEEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCC
Confidence            6  554    7999999999999999999999999999999999999999999999999888777777777766667777


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHH
Q 043610          304 LYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVK  383 (430)
Q Consensus       304 ~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~  383 (430)
                      ++||||+++++++.+||+++.+.+|++++.+|+++++++++++|++ .|+.....++..|++++++|.+++.+.+.+++.
T Consensus       261 ~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~  339 (386)
T 3qm2_A          261 MFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDN-SDFYRNDVAQANRSRMNVPFQLADNTLDKVFLE  339 (386)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT-CSSEECCBCGGGBCSSEEEEEESSGGGHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-CCCcccCCCHHHcCceEEEEECCCccccHHHHH
Confidence            8899999999999999999986658999999999999999999997 576443335567888899999985345557888


Q ss_pred             HHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          384 EAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       384 ~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      .|.++||.+..|++..+++|||++++||++||++++++|+++.++|+
T Consensus       340 ~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~~~~~  386 (386)
T 3qm2_A          340 ESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRHG  386 (386)
T ss_dssp             HHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHHHhcC
Confidence            89999999988988778899999999999999999999999999874

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=100.00  E-value=1.2e-57  Score=453.94  Aligned_cols=359  Identities=50%  Similarity=0.802  Sum_probs=311.4

Q ss_pred             CCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           66 GQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        66 ~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      ..-+-..+++++++++|++|+++|.+++.+++++|.|.++++|+++++.++++++|+.+++++|++++++|+|+++|+|+
T Consensus         9 ~~~~~~~~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~   88 (377)
T 3e77_A            9 SGVDLGTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCG   88 (377)
T ss_dssp             ------CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred             cccCcccccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHH
Confidence            34445667888999999999999999999999999999889999999999999999999999999876689998899999


Q ss_pred             HHHHHHhhcCCC--CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          146 QFAAVPLNLCTP--NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       146 a~~~~~~sl~~~--gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      ++++++.+++.+  ||+++++.+++|+++|.+.+++.| .+.+++..    ++...++++++  ++++|++|+++|++|+
T Consensus        89 a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~----~~~~~~~~~~~~~i~~~t~lV~~~h~et~  164 (377)
T 3e77_A           89 QFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL----GSYTKIPDPSTWNLNPDASYVYYCANETV  164 (377)
T ss_dssp             HHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC----SSSCSCCCGGGCCCCTTCSCEEEESEETT
T ss_pred             HHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC----CCcCCCCChHHhccCCCccEEEEeCccCc
Confidence            999999999754  899999999999999999898888 55544442    22234556665  7899999999999999


Q ss_pred             ccccCCCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhh
Q 043610          221 HGVEFKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE  300 (430)
Q Consensus       221 tG~~~pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~  300 (430)
                      ||+++|-|+  +++|++++||++|++|++|+|++++|++++|+|||+||+|+|++|+++++++.+.+..|.+++|....+
T Consensus       165 tG~~~pii~--~~~~~~~~vD~~q~~g~~~id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~  242 (377)
T 3e77_A          165 HGVEFDFIP--DVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAG  242 (377)
T ss_dssp             TTEECSSCC--CCTTCCEEEECTTTTTSSCCCGGGCSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHT
T ss_pred             hheEchhhh--ccCCCEEEEEcccccCCCCCchhhcCEEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhh
Confidence            999999742  478999999999999999999999999999999999999999999999999888777788888776666


Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC----c
Q 043610          301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS----D  376 (430)
Q Consensus       301 ~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~----~  376 (430)
                      ++.++||||+++++++.+||+++.+++|++++.+|+++++++++++|++..|+++.+.++..|++++++|.+++.    +
T Consensus       243 ~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~  322 (377)
T 3e77_A          243 NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA  322 (377)
T ss_dssp             TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHH
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchh
Confidence            677889999999999999999998766899999999999999999999866888765466678988899999852    1


Q ss_pred             hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          377 LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       377 ~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      .+..++..|.++||.+..|++..+++|+|+++++|++||++|+++|++++++|+
T Consensus       323 ~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~~~  376 (377)
T 3e77_A          323 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMHQ  376 (377)
T ss_dssp             HHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            224678888889999999998888999999999999999999999999999875

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=100.00  E-value=3.5e-46  Score=369.62  Aligned_cols=357  Identities=47%  Similarity=0.827  Sum_probs=292.9

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      .++|++++||+++|+.|++++.+.+.++.+.|.+.+..+|+++.+.+.++++++.+++++|++++++++++++|+|++++
T Consensus         3 ~~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~   82 (362)
T 2c0r_A            3 ERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA   82 (362)
T ss_dssp             CCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred             cceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence            46899999999999999999999987776667776656778888888999999999999999764466667789999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCCCC
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEY  228 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~pei  228 (430)
                      .++.++++|||+|+++.+++|+++|...++..|+++.++...+.+++..+|.+++++++++++|+++|++|+||+.++++
T Consensus        83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~~~~l  162 (362)
T 2c0r_A           83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKAF  162 (362)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEECSSC
T ss_pred             HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhCCeEEEecccccccccCCCHHHcccCCCcCEEEEeCCcCccceecccc
Confidence            99999999999999888888988776667776766667664211244345666655788999999999999999975545


Q ss_pred             ccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCc
Q 043610          229 PSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP  308 (430)
Q Consensus       229 ~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~  308 (430)
                      .++  +|+++++|++|++|..++++.++|++++|+|||+||+|+|++++++++++.+.+..|.++++....+.+...+|+
T Consensus       163 ~~i--~~~~vivD~a~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~  240 (362)
T 2c0r_A          163 PDT--GSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTP  240 (362)
T ss_dssp             CCC--TTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCC
T ss_pred             ccc--CCCEEEEEChhhccCCccchhHCcEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCc
Confidence            555  899999999999999999998889999999999999999999999999887765556666654443445566899


Q ss_pred             cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC-c-eecCCCCCCCccceEEEEcCCCchhH-HHHHHH
Q 043610          309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG-F-YKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEA  385 (430)
Q Consensus       309 ~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-~-~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L  385 (430)
                      |.+.++++.++|+++.+.+|++++.+++++++++++++|++ .| + .+.. ++..++.++++|.+++ +.+. ++.+.|
T Consensus       241 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~L  317 (362)
T 2c0r_A          241 PSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ-SGGFYRGCV-DVDSRSDMNITFRLAS-EELEKEFVKAS  317 (362)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-STTSSEESS-CGGGBCSSEEEEECSC-HHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-cCCccccCC-ChHHcCCcEEEEEcCC-cchHHHHHHHH
Confidence            99999999999998765447899999999999999999997 56 6 6642 2334566788888874 2333 799999


Q ss_pred             HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          386 AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       386 ~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      .++||.+.+|+...+++|||++.+++++|+++++++|++++++|.
T Consensus       318 ~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~~  362 (362)
T 2c0r_A          318 EQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSRG  362 (362)
T ss_dssp             HHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcC
Confidence            999998887776567899999999999999999999999988763

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=100.00  E-value=1.4e-38  Score=314.13  Aligned_cols=352  Identities=45%  Similarity=0.775  Sum_probs=274.3

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH-HHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA-TTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga-T~a~  147 (430)
                      +++|++++||.++|+.|++++.+.+.++.+.|.+.+..+++++.+.+.++++++.+++++|+++.++|+++ +|+ |+|+
T Consensus         2 ~~~~~~~~g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~-~g~gt~al   80 (360)
T 1w23_A            2 KQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFL-QGGASLQF   80 (360)
T ss_dssp             CCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEE-SSHHHHHH
T ss_pred             CceEeecCCCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEE-CCcchHHH
Confidence            46899999999999999999999887654445555555677788888999999999999999743377776 455 9999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc---cCCCccEEEEeecCCCcccc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~~t~tG~~  224 (430)
                      .+++.+++.+|++...+..+.+++.+...++..|+++.++..+  +.+ .+|+++++   +++++++|+++|++|+||.+
T Consensus        81 ~~~~~~l~~~~~~g~~vi~~~~~~~~~~~~~~~g~~~~v~~~~--~~~-~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~  157 (360)
T 1w23_A           81 TMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTK--ANS-YQSIPDFSEFQLNENDAYLHITSNNTIYGTQ  157 (360)
T ss_dssp             HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECG--GGT-SCSCCCGGGCCCCTTEEEEEEESEETTTTEE
T ss_pred             HHHHHHhcCCCCcccEEEecchhHHHHHHHHHhCCeEEeeccc--ccC-cCCccchHhhccCCCCCEEEEeCCCCCccee
Confidence            9999999877666554555677776555566667555566542  133 25667764   57889999999999999999


Q ss_pred             CCCCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCC
Q 043610          225 FKEYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSL  304 (430)
Q Consensus       225 ~pei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~  304 (430)
                      +|+|.+  ++|+++++|++|+.|..++++.++|++++|+||++||+|+|++++++++++.+.+..++++++....+.+..
T Consensus       158 ~~~i~~--~~~~~li~D~a~~~~~~~~~~~~~di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (360)
T 1w23_A          158 YQNFPE--INHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSL  235 (360)
T ss_dssp             CSSCCC--CCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTC
T ss_pred             cccccc--cCCceEEEechhhcCCCCcCcccCCEEEEEcccccCCCCcEEEEEcHHHHhhcccCCcchhhhhhhhhccCC
Confidence            986555  799999999999999998888888999999999999889999999999988766544544443322223455


Q ss_pred             CCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc-eecCCCCCCCccceEEEEcCCCchhH-HHH
Q 043610          305 YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF-YKCPVEKSVRSFMNVPFTLEKSDLEA-EFV  382 (430)
Q Consensus       305 ~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~-~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~  382 (430)
                      ++|++...++++..+++++.+.++++++.++++++++++++.|++..|+ ... ..+..+++.++.|.+++ ..+. ++.
T Consensus       236 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~  313 (360)
T 1w23_A          236 YNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGH-AEKGSRSLMNVTFNLRN-EELNQQFL  313 (360)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEES-SCGGGBCSSEEEEECSS-HHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCccccc-CCchhccCcEEEEEcCC-CccHHHHH
Confidence            6899999999999999987654468999999999999999999974334 432 12223455578888874 2223 688


Q ss_pred             HHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          383 KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       383 ~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++|.++||.+.+|+...+++|||++.+++++|+++++++|++++++
T Consensus       314 ~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~  359 (360)
T 1w23_A          314 AKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             HHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCeeeecCCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence            8899999998877655678999999999999999999999998764

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=5.6e-39  Score=316.45  Aligned_cols=342  Identities=22%  Similarity=0.279  Sum_probs=278.0

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ++.++|+|||.++|+.|++++.+.+.+.      .++.+|+++.+.+.++++++.+++++|.++.++++++ +|+|++++
T Consensus         3 ~~~~~~~p~p~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~-~g~t~al~   75 (362)
T 3ffr_A            3 NNKIYFTPGPSELYPTVRQHMITALDEK------IGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFL-ASATEIWE   75 (362)
T ss_dssp             CCCEEECSSSCCCCTTHHHHHHHHHHTT------TTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEE-SCHHHHHH
T ss_pred             CcceeccCCCcCCCHHHHHHHHHHhcCC------ccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEe-CCchHHHH
Confidence            4689999999999999999988877531      1124567889999999999999999999654366664 88999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC-
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK-  226 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p-  226 (430)
                      .++.++.++  +++++..++|+..+...++..| +++.++...    +..+|++++++++++++|++++++|+||.+.| 
T Consensus        76 ~~~~~l~~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~~~~~~v~~~~~~nptG~~~~l  149 (362)
T 3ffr_A           76 RIIQNCVEK--KSFHCVNGSFSKRFYEFAGELGREAYKEEAAF----GKGFYPADITVPADAEIICLTHNETSSGVSMPV  149 (362)
T ss_dssp             HHHHHHCSS--EEEEEECSHHHHHHHHHHHHTTCEEEEEECCT----TCCCCGGGCCCCTTCCEEEEESEETTTTEECCH
T ss_pred             HHHHhccCC--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCC----CCCCCHHHHhccCCccEEEEEcCCCCcceeCCH
Confidence            999999876  7777888899877777777788 888887642    23578888876788999999999999999999 


Q ss_pred             -CCccc-cCC-CcEEEEeccCcCCCCccccccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCC------CCcccccc
Q 043610          227 -EYPSA-KNS-TGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK------TPLMLDYK  296 (430)
Q Consensus       227 -ei~~~-~~~-g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~------~p~~~~~~  296 (430)
                       +|.++ +++ |+++++|++|++|..++++.+.|++++|+|||++ |+|+|++++++++++.+.+.      .++++++.
T Consensus       150 ~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~  229 (362)
T 3ffr_A          150 EDINTFRDKNKDALIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIP  229 (362)
T ss_dssp             HHHTTSGGGSTTSEEEEECTTTTTSSCCCTTSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHH
T ss_pred             HHHHHHHHhCCCCEEEEecccccCCcccChhHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHH
Confidence             78886 688 9999999999999999888888999999999997 99999999999987764321      23333332


Q ss_pred             ch---hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          297 IH---DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       297 ~~---~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                      ..   .+.+.+++|++...++++..+++++.+. |++++.++++++++++++.|++.+|+++.+..+..++..++.|.++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~  308 (362)
T 3ffr_A          230 SMLEKARVNQTPETPNAMNIFLLGKVTGDMLQI-SADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTT  308 (362)
T ss_dssp             HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEES
T ss_pred             HHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecC
Confidence            21   2334557899999999999999987754 6999999999999999999998558988753444456678888887


Q ss_pred             CCchhHHHHHHHHHcCCeecCCCCC--CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          374 KSDLEAEFVKEAAKEKMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       374 ~~~~~~~~~~~L~~~Gi~~~~g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +  ...++.+.|.++||.+.+|...  .+++|||++.+++++|+++++++|++++
T Consensus       309 ~--~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          309 M--LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             S--CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred             C--CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence            5  2347999999899998877543  4579999999999999999999999874

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=100.00  E-value=4.9e-37  Score=304.79  Aligned_cols=342  Identities=18%  Similarity=0.175  Sum_probs=273.7

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      .-...+||+|||.++|+.|++++.+.+            ..|+++.+.+.++++++.+++++|++++++++++++|+|++
T Consensus        16 ~~~~~~~~~pgp~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~a   83 (376)
T 3f0h_A           16 YFQGMLNFTVGPVMSSEEVRAIGAEQV------------PYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGS   83 (376)
T ss_dssp             TTSSCEECSSSSCCCCHHHHHHHTSCC------------CCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHH
T ss_pred             cccCceeecCCCCCCcHHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHH
Confidence            345689999999999999999987754            23566788889999999999999998655788878999999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      ++.++.+++++||+|++..+++++..+...++..| ++..++...    +..+|+++++  +++++++|++++++|+||.
T Consensus        84 l~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~  159 (376)
T 3f0h_A           84 MEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLEH----GKKLTKEKLYEYDNQNFTGLLVNVDETSTAV  159 (376)
T ss_dssp             HHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECCT----TCCCCHHHHHTTTTSCCCEEEEESEETTTTE
T ss_pred             HHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC----CCCCCHHHHHHhhccCceEEEEecccCCcce
Confidence            99999999999999999988899877766677778 888887742    2357888887  6789999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCC--CCccccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK--TPLMLDY  295 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~--~p~~~~~  295 (430)
                      +.|  +|.++ +++|+++++|++|++|..+++++++  |++++|+||++| ++|+|++++++++++.+.+.  ..+++++
T Consensus       160 ~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~  239 (376)
T 3f0h_A          160 LYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDL  239 (376)
T ss_dssp             ECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCH
T ss_pred             ecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecH
Confidence            999  78886 6899999999999999998888764  799999999997 99999999999988775431  2223333


Q ss_pred             cchh---hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          296 KIHD---ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       296 ~~~~---~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                      ....   ..+.+.+|++...++++.++++++.+.++++.+.++..++++++++.|.+ .|+++.+   ..++..++.+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~---~~~~~~~~~~~~  315 (376)
T 3f0h_A          240 KDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD-LPFELVS---ESPANGVTSVHP  315 (376)
T ss_dssp             HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT-SSEEECC---SSBBTTEEEEEE
T ss_pred             HHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-cCCccCc---cccCceEEEEeC
Confidence            2221   12344568888888999999998875446899999999999999999986 6777653   123445555554


Q ss_pred             CCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          373 EKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       373 ~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ++ ....++.+.|.++ ||.+.+|..  ..+.+|||++.+++++|+++++++|++++++.
T Consensus       316 ~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~~  374 (376)
T 3f0h_A          316 TT-ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKRN  374 (376)
T ss_dssp             SS-SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred             CC-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence            32 1233799999887 999877642  24579999999999999999999999988753

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=100.00  E-value=1e-35  Score=298.62  Aligned_cols=342  Identities=22%  Similarity=0.302  Sum_probs=263.5

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+.+|+|++||.++|+.|++++.++.       .+.....++++++.+.++++++.+++++|++++++|+++++|+|+++
T Consensus        38 ~~~~~~~~~~~~~~~~~v~~a~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al  110 (398)
T 2fyf_A           38 KPRDGRFGSGPSKVRLEQLQTLTTTA-------AALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFW  110 (398)
T ss_dssp             SCSSCBCCSSSCCCCHHHHHGGGTTT-------TTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHH
T ss_pred             ccCCccccCCCCCCCHHHHHHHhhcC-------CCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHH
Confidence            45689999999999999999987631       01111236678888889999999999999974337877458999999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHh--C-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCcccc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF--C-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~--g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~  224 (430)
                      +.++.+++++|  ++++..+.|+..+...+...  | +++.++..    ++..++.   ++++++++|++++++|+||.+
T Consensus       111 ~~~~~~l~~~g--v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~g~~~~~---~i~~~~~~v~~~~~~nptG~~  181 (398)
T 2fyf_A          111 DAAAFGLIDKR--SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD----PGSAPEP---QTDPSVDVIAWAHNETSTGVA  181 (398)
T ss_dssp             HHHHHHTCSSC--EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC----TTCCCCC---CCCTTCSEEEEESEETTTTEE
T ss_pred             HHHHHHhcCCC--eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC----CCCCCCc---cccCCCCEEEEeCcCCCccee
Confidence            99999998876  44456777876665556666  7 77777764    2333322   256889999999999999999


Q ss_pred             CC--CCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCC-ccEEEEEcHHHHhccCC------CCCccccc
Q 043610          225 FK--EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPS-GVTIVIVRKDLLGNAQD------KTPLMLDY  295 (430)
Q Consensus       225 ~p--ei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~-G~g~l~v~~~~~~~~~~------~~p~~~~~  295 (430)
                      +|  +|.++  +|+++++|++|++|..++++++.|++++|+||++|++ |+|++++++++++.+.+      ..+.++++
T Consensus       182 ~~~~~i~~~--~~~~vivD~a~~~~~~~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~  259 (398)
T 2fyf_A          182 VAVRRPEGS--DDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSL  259 (398)
T ss_dssp             CCCCCCTTC--C-CEEEEECTTTTTTSCCCGGGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCH
T ss_pred             cchHHhhhh--cCCeEEEEeccccCCcccCcccCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEeh
Confidence            99  78777  8999999999999999988877899999999999865 69999999998876521      12334443


Q ss_pred             cchhh---cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          296 KIHDE---NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       296 ~~~~~---~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                      ....+   .+..++|++...++++..+|+.+.+.++++++.++++++++++++.|++..|+++....+..+++.++.|.+
T Consensus       260 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~  339 (398)
T 2fyf_A          260 PIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDF  339 (398)
T ss_dssp             HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEE
T ss_pred             HHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEEC
Confidence            22111   235568999999999999999877554499999999999999999999755888763123235655788888


Q ss_pred             CCCchhH-HHHHHHHHcCCeecCCCCC--CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          373 EKSDLEA-EFVKEAAKEKMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       373 ~~~~~~~-~~~~~L~~~Gi~~~~g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++ +.+. ++.+.|.++||.+.+|+..  .+++|||++.+++++|+++++++|++++++
T Consensus       340 ~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~  397 (398)
T 2fyf_A          340 VD-DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER  397 (398)
T ss_dssp             CT-TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CC-CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            64 3333 7999999999998876543  357999999999999999999999998764

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=100.00  E-value=2.1e-36  Score=303.65  Aligned_cols=344  Identities=13%  Similarity=0.130  Sum_probs=271.9

Q ss_pred             cCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           65 SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        65 ~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ....+..++|+|||.++++.|++++.+.+            .+++++.+.+.++++++.+++++|.+++ +.+++++|++
T Consensus         8 ~~~~~~~~~~~pgp~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~~sgt   74 (411)
T 3nnk_A            8 QLNPPSRLLMGPGPINADPRVLRAMSSQL------------IGQYDPAMTHYMNEVMALYRGVFRTENR-WTMLVDGTSR   74 (411)
T ss_dssp             SCCCCCCEEESSSCCCCCHHHHHHHTSCC------------CCTTCHHHHHHHHHHHHHHHHHHTCCCS-EEEEEESCHH
T ss_pred             ccCCccceeecCCCCCCCHHHHHHhhccc------------cccccHHHHHHHHHHHHHHHHHhCCCCC-cEEEECCCcH
Confidence            34456789999999999999999987643            3456778888999999999999999876 5455568999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCC
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETI  220 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~  220 (430)
                      ++++.++.+++++||+|++..+++++..+...++..| +++.++...    +..+|+++++  +++ ++++|++++++|+
T Consensus        75 ~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~i~~~~~~~v~~~~~~np  150 (411)
T 3nnk_A           75 AGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPW----GEVFTPDQVEDAVKRIRPRLLLTVQGDTS  150 (411)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCT----TCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCC----CCCCCHHHHHHHHhhCCCeEEEEeCCCCC
Confidence            9999999999999999999998888865666677778 888887742    2357888887  654 8999999999999


Q ss_pred             ccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCC-----
Q 043610          221 HGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKT-----  289 (430)
Q Consensus       221 tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~-----  289 (430)
                      ||.+.|  +|.++ +++|+++++|++|++|..++++..+  |++++|+|||+ ||.|+|++++++++++.+.+..     
T Consensus       151 tG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~  230 (411)
T 3nnk_A          151 TTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEG  230 (411)
T ss_dssp             TTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGG
T ss_pred             cceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhccccccc
Confidence            999999  78886 6899999999999999998888765  79999999996 7999999999999887654321     


Q ss_pred             ---------------Cccccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          290 ---------------PLMLDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       290 ---------------p~~~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                                     ..++++...    ...+...+|++...+.++..+++.+.+ .|++++.+++.++++++++.|++ 
T Consensus       231 ~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~-  308 (411)
T 3nnk_A          231 IRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQ-EGLDYGIARHKLHGDALVKGIQA-  308 (411)
T ss_dssp             GCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             ccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-
Confidence                           122221110    122345679999999999999998764 47999999999999999999997 


Q ss_pred             CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEee-cCCCCHHHHHHHHHHHHHHH
Q 043610          351 NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASI-YNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       351 ~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~-~~~~t~edv~~ll~~L~~~~  426 (430)
                      .|+++.. ++..+...++.|.+++.....++.+.|.++ ||.+.+|..  ..+++||++ +..++++|+++++++|++++
T Consensus       309 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l  387 (411)
T 3nnk_A          309 MGLETFG-DLKHKMNNVLGVVIPQGINGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVL  387 (411)
T ss_dssp             TTCCBCS-CGGGBCSSEEEEECCTTCCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             cCCEeCC-CcccccccEEEEECCCCCCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHH
Confidence            5887763 232344567788886422233788888765 999877643  245899998 54568999999999999988


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       388 ~~  389 (411)
T 3nnk_A          388 NY  389 (411)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=100.00  E-value=6e-36  Score=293.86  Aligned_cols=331  Identities=20%  Similarity=0.223  Sum_probs=262.7

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      |||+|||.++++.|++++.+.+.            .++++.+.+.++++|+.+++++|++++ ++++ ++|+|++++.++
T Consensus         3 ~l~~~~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~-~i~~-~~g~t~a~~~~~   68 (352)
T 1iug_A            3 WLLTPGPVRLHPKALEALARPQL------------HHRTEAAREVFLKARGLLREAFRTEGE-VLIL-TGSGTLAMEALV   68 (352)
T ss_dssp             EECSSSSCCCCHHHHHHHHSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCSSE-EEEE-ESCHHHHHHHHH
T ss_pred             ccccCCCCCCCHHHHHHhccCCC------------CccCHHHHHHHHHHHHHHHHHhCCCCc-eEEE-cCchHHHHHHHH
Confidence            89999999999999999987652            245567777889999999999999864 6666 588999999999


Q ss_pred             hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--CC
Q 043610          152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EY  228 (430)
Q Consensus       152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei  228 (430)
                      .+++++||+|++..+++++..+...++..| +++.++...   .+ .+|+++++- +++++|++++++|+||.+.|  +|
T Consensus        69 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~-~~~~~v~~~~~~nptG~~~~l~~i  143 (352)
T 1iug_A           69 KNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPY---GD-TPRPEDVAK-EGYAGLLLVHSETSTGALADLPAL  143 (352)
T ss_dssp             HHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCT---TC-CCCTTTSCC-SSCSEEEEESEETTTTEECCHHHH
T ss_pred             HhccCCCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCC---CC-CCCHHHHhc-cCCcEEEEEEecCCcceecCHHHH
Confidence            999899999999998888876555566678 888887743   22 467777754 78899999999999999999  78


Q ss_pred             ccc-cCC--CcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccc---hh
Q 043610          229 PSA-KNS--TGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKI---HD  299 (430)
Q Consensus       229 ~~~-~~~--g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~---~~  299 (430)
                      .++ +++  |+++++|++|++|..++++.++  |++++|+|||+ ||.|+|+++++++.++.+.+ ..+++++..   ..
T Consensus       144 ~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  222 (352)
T 1iug_A          144 ARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKP-RGYYLDLARELKAQ  222 (352)
T ss_dssp             HHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC-CSSTTCHHHHHHHH
T ss_pred             HHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhC-CCceeeHHHHHhhc
Confidence            776 577  9999999999999988887654  79999999977 68899999999998876544 223333321   11


Q ss_pred             hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH
Q 043610          300 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA  379 (430)
Q Consensus       300 ~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~  379 (430)
                      ......+|++...+.++..+++.+.+ . ++++.++++++++++++.|++ .|+++..  +. +...++.|.+++.....
T Consensus       223 ~~~~~~~~~~~~~~~a~~~al~~~~~-~-~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~-~~~~~~~~~~~~~~~~~  296 (352)
T 1iug_A          223 KEGESAWTPAINLVLAVAAVLEEVLP-R-LEEHLALKAWQNALLYGVGEE-GGLRPVP--KR-FSPAVAAFYLPEGVPYA  296 (352)
T ss_dssp             TTTCCSSCCCHHHHHHHHHHHHHHGG-G-HHHHHHHHHHHHHHHHHHHHH-TTCEESC--SS-BCTTCEEEECCTTCCHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHH-CCCcccc--cc-cCCeEEEEEcCCCCCHH
Confidence            22345678999999999999997653 3 889999999999999999997 4887753  21 34456778887421233


Q ss_pred             HHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          380 EFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       380 ~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++.++|.++||.+.+|..  ..+++||+++.+++++|+++++++|++++++
T Consensus       297 ~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  347 (352)
T 1iug_A          297 RVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEE  347 (352)
T ss_dssp             HHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHH
Confidence            799999999999877653  2457999999999999999999999998764

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=100.00  E-value=3.9e-36  Score=298.46  Aligned_cols=337  Identities=16%  Similarity=0.208  Sum_probs=265.7

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEeCcHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE-YSVLFLQGGATTQFAA  149 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~-~~vv~~~~gaT~a~~~  149 (430)
                      .++|++||.++++.|++++.+.+.            ++++..+.+.++++++.+++++|++++ +++++ ++|+|++++ 
T Consensus         3 ~~~~~~gp~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~-~~g~t~al~-   68 (384)
T 3zrp_A            3 KLLLHVGPTTIKEDVLVAGLENNV------------GFTSKEFVEALAYSLKGLRYVMGASKNYQPLII-PGGGTSAME-   68 (384)
T ss_dssp             ---CCSSCSCCCHHHHHHTTCCSC------------CTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEE-ESCHHHHHH-
T ss_pred             ceeccCCCCCCCHHHHHHhhcccc------------ccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEE-cCCcHHHHH-
Confidence            478999999999999999877542            345667788899999999999999862 26666 588999999 


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCccccC
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVEF  225 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~~  225 (430)
                      ++.+++++||+|++..+++++..+...++..| +++.++...   .+ .+|+++++  +++ ++++|++++++|+||.+.
T Consensus        69 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~  144 (384)
T 3zrp_A           69 SVTSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSP---GD-YVKPGEVEEEVRKSEYKLVALTHVETSTGVRE  144 (384)
T ss_dssp             HGGGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCST---TC-CCCHHHHHHHHHHSCEEEEEEESEETTTTEEC
T ss_pred             HHHhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCC---CC-CCCHHHHHHHHHhCCCcEEEEeCCCCCCceEC
Confidence            89999999999999888888876666666678 777777643   22 47888887  555 799999999999999999


Q ss_pred             C--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhcc-CCC--CCcccccc
Q 043610          226 K--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNA-QDK--TPLMLDYK  296 (430)
Q Consensus       226 p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~-~~~--~p~~~~~~  296 (430)
                      |  +|.++ +++|+++++|++|++|..++++.++  |++++|+||++ |+.|+|++++++++++.+ .+.  .+++++..
T Consensus       145 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (384)
T 3zrp_A          145 PVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLR  224 (384)
T ss_dssp             CHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHH
T ss_pred             cHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHH
Confidence            9  78886 7899999999999999998888754  79999999999 599999999999998775 321  22333322


Q ss_pred             chh---h-----cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          297 IHD---E-----NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       297 ~~~---~-----~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      ...   .     ....+||++...+.++..+++.+.+ .+++.+.++++++++++++.|++. |+++....+..+...++
T Consensus       225 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  302 (384)
T 3zrp_A          225 NWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEK-EGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVT  302 (384)
T ss_dssp             HHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEE
T ss_pred             HHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEE
Confidence            111   1     2233359999999999999998764 479999999999999999999974 88776422233455667


Q ss_pred             EEEcCCCchhHHHHHHHHHcCCeecCCC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          369 PFTLEKSDLEAEFVKEAAKEKMVQLKGH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       369 ~f~~~~~~~~~~~~~~L~~~Gi~~~~g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .|.+++ ....++.+.|.++||.+.+|. ...+++||+++.+++++|+++++++|++++++
T Consensus       303 ~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~  362 (384)
T 3zrp_A          303 GVILKV-ADPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTPNDAIIAISVIERTLRK  362 (384)
T ss_dssp             EEECSS-SCHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             EEECCC-CCHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCHHHHHHHHHHHHHHHHH
Confidence            788875 223379999999999987765 33368999999999999999999999998875

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=100.00  E-value=6.2e-36  Score=300.68  Aligned_cols=342  Identities=15%  Similarity=0.136  Sum_probs=271.5

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .++.++|+++|.++++.+++++.+..            .+++++.+.+.++++++.+++++|.+++ +++++++|+|+++
T Consensus         9 ~~~~~~~~p~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~~~~~~s~t~al   75 (416)
T 3isl_A            9 TPLRTIMTPGPVEVDPRVLRVMSTPV------------VGQFDPAFTGIMNETMEMLRELFQTKNR-WAYPIDGTSRAGI   75 (416)
T ss_dssp             CCCCEECSSSSCCCCHHHHHHTTSCC------------CCTTSHHHHHHHHHHHHHHHHHTTCCCS-EEEEEESCHHHHH
T ss_pred             cccceeecCCCcCcCHHHHHHhcccC------------CCCccHHHHHHHHHHHHHHHHHhCCCCC-cEEEecCcHHHHH
Confidence            45789999999999999999876532            2345567788899999999999999875 6665678999999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGV  223 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~  223 (430)
                      ..++.+++++||+|++..+++++..+...++..| +++.++...   .+ .+|+++++  ++ +++++|++++++|+||.
T Consensus        76 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~v~~~~~~nptG~  151 (416)
T 3isl_A           76 EAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW---GT-VFDPEDIIREIKKVKPKIVAMVHGETSTGR  151 (416)
T ss_dssp             HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT---TC-CCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred             HHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC---CC-CCCHHHHHHHHhhCCCcEEEEEccCCCCce
Confidence            9999999999999999999988866666677778 888888753   23 57888887  65 68999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC---------
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK---------  288 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~---------  288 (430)
                      +.|  +|.++ +++|+++++|++|++|..++++.++  |++++|+|||+ ||.|+|++++++++++.+.+.         
T Consensus       152 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~  231 (416)
T 3isl_A          152 IHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIAT  231 (416)
T ss_dssp             ECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC---------
T ss_pred             ecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccc
Confidence            999  78876 6899999999999999998888765  79999999996 799999999999988775431         


Q ss_pred             -------------CCccccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          289 -------------TPLMLDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       289 -------------~p~~~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                                   ...+++....    .......+|++...++++..+++.+.+ .|++++.+++.++++++++.|.+ .
T Consensus       232 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~-~  309 (416)
T 3isl_A          232 QADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLE-EGLETRFERHRHHEAALAAGIKA-M  309 (416)
T ss_dssp             ---------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             cccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-c
Confidence                         1122221111    122334679999999999999998764 47999999999999999999997 6


Q ss_pred             CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecCCCCHHH-HHHHHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYNAMPLAG-VEKLVAFMKDFQA  427 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~~~t~ed-v~~ll~~L~~~~~  427 (430)
                      |+++.. ....+...++.|.+++.....++.+.|.++ ||.+.+|..  ..+++||+++.+++++| +++++++|+++++
T Consensus       310 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~  388 (416)
T 3isl_A          310 GLRLFG-DDSCKMPVVTCVEIPGGIDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLL  388 (416)
T ss_dssp             TCCBCS-CGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred             CCEecc-CccccCCcEEEEeCCCCCCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHH
Confidence            887764 222344567888886422233799999776 999887653  34589999988777766 9999999999887


Q ss_pred             hh
Q 043610          428 KH  429 (430)
Q Consensus       428 ~~  429 (430)
                      +.
T Consensus       389 ~~  390 (416)
T 3isl_A          389 RH  390 (416)
T ss_dssp             HT
T ss_pred             Hc
Confidence            53

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=100.00  E-value=1.9e-35  Score=295.11  Aligned_cols=344  Identities=17%  Similarity=0.194  Sum_probs=267.1

Q ss_pred             cCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           65 SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        65 ~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ....++.|++++||.++|+.|++++.+.+.            .++.+.....++++++.+++++|+++++++++ ++|+|
T Consensus        14 ~~~~~~~~~~~~g~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t   80 (393)
T 2huf_A           14 PLVTPNKLLMGPGPSNAPQRVLDAMSRPIL------------GHLHPETLKIMDDIKEGVRYLFQTNNIATFCL-SASGH   80 (393)
T ss_dssp             CCCCCCCEECSSSCCCCCHHHHHHTTSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEE-SSCHH
T ss_pred             ccCCCCeEEecCCCCCCCHHHHHHHHhhhc------------cCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEE-cCcHH
Confidence            345567899999999999999999877542            12345566788999999999999976435555 68999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCC
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETI  220 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~  220 (430)
                      ++++.++.+++++||+|++..+++++..+...++..| +++.++..+   .+ .+|+++++  +++ ++++|++++++|+
T Consensus        81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~v~~~~~~np  156 (393)
T 2huf_A           81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV---GQ-SLSLDEIRDALLIHKPSVLFLTQGDSS  156 (393)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT---TC-CCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred             HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC---CC-CCCHHHHHHHHhccCCcEEEEEccCCC
Confidence            9999999999899999999998888866655666678 887887643   22 47888887  666 8999999999999


Q ss_pred             ccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC----CC
Q 043610          221 HGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK----TP  290 (430)
Q Consensus       221 tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~----~p  290 (430)
                      ||.+.|  +|.++ +++|+++++|++|++|..++++.++  |++++|+|||+ ||+|+|++++++++++.+.+.    .+
T Consensus       157 tG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~  236 (393)
T 2huf_A          157 TGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKV  236 (393)
T ss_dssp             TTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSC
T ss_pred             ccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCce
Confidence            999999  67775 6899999999999999988877654  79999999997 699999999999988875432    24


Q ss_pred             ccccc-------cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          291 LMLDY-------KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       291 ~~~~~-------~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      ++++.       ......+...+|++...+.++..+++.+.+ .+++++.++++++++++++.|.+ .|+++.. .+..+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~  313 (393)
T 2huf_A          237 YYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACE-EGLPALIARHEDCAKRLYRGLQD-AGFELYA-DPKDR  313 (393)
T ss_dssp             GGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSS-CGGGB
T ss_pred             EEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHH-cCCeecc-Ccccc
Confidence            44331       111112345579999999999999998764 37999999999999999999997 4887653 22224


Q ss_pred             ccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCC--CCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610          364 SFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHR--SVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~--~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~  428 (430)
                      ++.++.|.++......++.++|.+ +||.+.+|..  ..+++||+++.+ ++++|+++++++|++++++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~  382 (393)
T 2huf_A          314 LSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA  382 (393)
T ss_dssp             CTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence            555677888631123378888876 4999887643  246899999655 5799999999999998764

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=100.00  E-value=1.8e-35  Score=295.20  Aligned_cols=344  Identities=16%  Similarity=0.174  Sum_probs=269.0

Q ss_pred             cCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           65 SGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        65 ~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ....+.+|++++||+++|+.|++++.+.+.            .+++..+.+.++++|+.+++++|++++ ++++ ++|+|
T Consensus         4 p~~~~~~yl~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~-t~g~t   69 (392)
T 2z9v_A            4 PEHADPVITLTAGPVNAYPEVLRGLGRTVL------------YDYDPAFQLLYEKVVDKAQKAMRLSNK-PVIL-HGEPV   69 (392)
T ss_dssp             CTTSCCSEECSSSCCCCCHHHHHHTTSCCC------------CTTSHHHHHHHHHHHHHHHHHTTCSSC-CEEE-SSCTH
T ss_pred             ccCCCcceeecCCCcCCCHHHHHHHhcccc------------ccccHHHHHHHHHHHHHHHHHhCCCCC-EEEE-eCCch
Confidence            345577999999999999999999887653            134566777889999999999999764 6666 58899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c--CCCccEEEEeecCC
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q--NPDAKYLHICANET  219 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~~lv~i~~~~t  219 (430)
                      +++..++.+++++||+|++..+++++..+...++..| +++.++..+   .+ .+|+++++  +  ++++++|++++++|
T Consensus        70 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~~~v~~~~~~n  145 (392)
T 2z9v_A           70 LGLEAAAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY---NE-AIDPQAVADMLKAHPEITVVSVCHHDT  145 (392)
T ss_dssp             HHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT---TS-CCCHHHHHHHHHHCTTCCEEEEESEEG
T ss_pred             HHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC---CC-CCCHHHHHHHHhcCCCCcEEEEeccCC
Confidence            9999999998899999999988888776655666678 888888743   23 47888887  5  57899999999999


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCC--C-
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKT--P-  290 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~--p-  290 (430)
                      +||.+.|  +|.++ +++|+++++|++|++|..++++.++  |++++|+|||+ ||+|+|++++++++++.+.+..  + 
T Consensus       146 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~  225 (392)
T 2z9v_A          146 PSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPR  225 (392)
T ss_dssp             GGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCC
T ss_pred             CCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCC
Confidence            9999999  78886 6899999999999999988887665  79999999988 6899999999999887654311  1 


Q ss_pred             -ccccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610          291 -LMLDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF  365 (430)
Q Consensus       291 -~~~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~  365 (430)
                       +++++...    .......+|++...++++..+++.+.+ .|++.+.++++++++++++.|++ .|+++....+..+..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~  303 (392)
T 2z9v_A          226 ASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLN-EGPEAVWARHALTAKAMRAGVTA-MGLSVWAASDSIASP  303 (392)
T ss_dssp             SSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSSSGGGBCT
T ss_pred             ceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH-cCCeeccCCccccCC
Confidence             33332211    112334578999999999999998764 47999999999999999999997 487765312212344


Q ss_pred             ceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          366 MNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       366 ~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++.|.+++.....++.++|.++ ||.+.+|..  ..+.+|||++. +++++|+++++++|++++++
T Consensus       304 ~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~  370 (392)
T 2z9v_A          304 TTTAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNA  370 (392)
T ss_dssp             TEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence            56778886322233799999887 999877642  24689999755 88999999999999998764

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=100.00  E-value=5.2e-35  Score=291.21  Aligned_cols=342  Identities=15%  Similarity=0.231  Sum_probs=270.0

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+..++|++||.++++.|++++.+.+            ..++++.+.+..+++++.+++++|.++++++++ ++|+++++
T Consensus        21 ~~~~~~~~p~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~-~~gg~~al   87 (393)
T 3kgw_A           21 VPTRLLLGPGPSNLAPRVLAAGSLRM------------IGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVV-SGSGHCAM   87 (393)
T ss_dssp             CCCCEECSSSCCCCCHHHHHHTTCCC------------CCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEE-SCCTTTHH
T ss_pred             CccceeccCCCCCCCHHHHHHhcccc------------cCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEE-eCCcHHHH
Confidence            45679999999999999999987643            234566777888999999999999986534555 68899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCccc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGV  223 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~  223 (430)
                      ..++.+++++||+|++...++|+..+...++..| +++.++...   .+ .+|+++++  +++ ++++|++++++|+||.
T Consensus        88 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~-~~d~~~l~~~i~~~~~~~v~~~~~~nptG~  163 (393)
T 3kgw_A           88 ETALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKP---GE-HYTLQEVEEGLAQHKPVLLFLVHGESSTGV  163 (393)
T ss_dssp             HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT---TC-CCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred             HHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCC---CC-CCCHHHHHHHHhhCCCcEEEEeccCCcchh
Confidence            9999999999999999988888877667777788 887787743   22 57888887  666 8999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC----CCccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK----TPLML  293 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~----~p~~~  293 (430)
                      +.|  +|.++ +++|+++++|++|++|..+++++.+  |+++.++|||+ |+.|+|++++++++++.+.+.    .++++
T Consensus       164 ~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~  243 (393)
T 3kgw_A          164 VQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYT  243 (393)
T ss_dssp             ECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTT
T ss_pred             hccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceee
Confidence            999  67776 6899999999999999988877655  79999999988 699999999999988775431    22333


Q ss_pred             cccc-------hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          294 DYKI-------HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       294 ~~~~-------~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                      ++..       ....+...+|++...++++..+++.+.+ .+++++.+++.++++++++.|++ .|+++...+...+.+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~  321 (393)
T 3kgw_A          244 DITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAE-QGLENCWRRHREATAHLHKHLQE-MGLKFFVKDPEIRLPT  321 (393)
T ss_dssp             CHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSSSGGGBCSS
T ss_pred             cHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-cCCeeccCChhhcCCe
Confidence            3211       0112345579999999999999997764 48999999999999999999997 4887763233445556


Q ss_pred             eEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610          367 NVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       367 iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~  428 (430)
                      ++.|.+++.....++.+.|.++ ||.+.+|..  ..+++||+++.+ ++++|+++++++|++++++
T Consensus       322 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~  387 (393)
T 3kgw_A          322 ITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQH  387 (393)
T ss_dssp             EEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence            6678886422233799998877 999887653  245899998554 5999999999999998865

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=100.00  E-value=6.3e-35  Score=286.18  Aligned_cols=333  Identities=16%  Similarity=0.181  Sum_probs=261.1

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~~~  149 (430)
                      .++|+|||.++|+.|++++.+.+.            .|+++.+.+..+++++.+++++|.+ +.+++++ ++|+|++++.
T Consensus         1 ~~~~~~gp~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~-t~g~t~a~~~   67 (353)
T 2yrr_A            1 MLLLTPGPTPIPERVQKALLRPMR------------GHLDPEVLRVNRAIQERLAALFDPGEGALVAAL-AGSGSLGMEA   67 (353)
T ss_dssp             CEECSSSSCCCCHHHHGGGGSCCC------------CTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEE-SSCHHHHHHH
T ss_pred             CccCCCCCCCCCHHHHHHHhcccc------------cccCHHHHHHHHHHHHHHHHHhCCCCCCceEEE-cCCcHHHHHH
Confidence            478999999999999999877652            1456677788999999999999996 2225555 6899999999


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCccccC
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVEF  225 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~~  225 (430)
                      ++.++.+  |+|++...++++..+...++..| +++.++..+   .+ .+|+++++  +++ ++++|++++++|+||.+.
T Consensus        68 ~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~  141 (353)
T 2yrr_A           68 GLANLDR--GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPP---GE-PVDPEAVARALKRRRYRMVALVHGETSTGVLN  141 (353)
T ss_dssp             HHHTCSC--CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCT---TS-CCCHHHHHHHHHHSCCSEEEEESEETTTTEEC
T ss_pred             HHHHhcC--CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCC---CC-CCCHHHHHHHHHhCCCCEEEEEccCCCcceec
Confidence            9988876  88998888888765555667778 888888743   22 47888887  666 899999999999999999


Q ss_pred             C--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCC-ccccccch
Q 043610          226 K--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTP-LMLDYKIH  298 (430)
Q Consensus       226 p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p-~~~~~~~~  298 (430)
                      |  +|.++ +++|+++++|++|++|..++++..+  |++++|+|||+ ||+|+|++++++++++.+.. .+ +++++...
T Consensus       142 ~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~-~~~~~~~~~~~  220 (353)
T 2yrr_A          142 PAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTG-KRGWYLDLARV  220 (353)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCC-CSCSTTCHHHH
T ss_pred             CHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhcc-CCCccccHHHH
Confidence            9  78776 6889999999999999888777655  79999999988 68899999999999877642 12 23322111


Q ss_pred             ---hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC
Q 043610          299 ---DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS  375 (430)
Q Consensus       299 ---~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~  375 (430)
                         .......+|++...+.++..+++.+.+ .|++++.++++++++++++.|++ .|+++..  +..+.+.++.|.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~~~~~~~~~~~~~~~  296 (353)
T 2yrr_A          221 AEHWERGGYHHTTPVLLHYALLEALDLVLE-EGVAARERRAREVYAWVLEELKA-RGFRPYP--KASPLPTVLVVRPPEG  296 (353)
T ss_dssp             HHHHTTCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCEESC--SSSBCTTEEEEECCTT
T ss_pred             hhhhhcCCCCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHH-CCCcccc--CccCCCeEEEEECCCC
Confidence               112344578999999999999998764 47999999999999999999997 4888764  2223456677888632


Q ss_pred             chhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHH-HHHHHHHHHHH
Q 043610          376 DLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVE-KLVAFMKDFQA  427 (430)
Q Consensus       376 ~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~-~ll~~L~~~~~  427 (430)
                      ....++.++|.++||.+.+|..  ..+++|+|++.+++++|++ +++++|+++++
T Consensus       297 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~  351 (353)
T 2yrr_A          297 VDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALA  351 (353)
T ss_dssp             CCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence            1233799999999999877652  2457999998888999999 99999999875

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=100.00  E-value=1.3e-34  Score=289.41  Aligned_cols=343  Identities=17%  Similarity=0.229  Sum_probs=263.9

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ..++.|++++||.++++.|++++.+.+.            +++++.+...++++++.+++++|.++++++++ ++|+|++
T Consensus        15 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~-~~g~t~a   81 (396)
T 2ch1_A           15 IIPEKIMMGPGPSNCSKRVLTAMTNTVL------------SNFHAELFRTMDEVKDGLRYIFQTENRATMCV-SGSAHAG   81 (396)
T ss_dssp             CCCCCBCCSSSSCCCCHHHHHHTTSCCC------------CTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEE-SSCHHHH
T ss_pred             CCCcceeecCCCCCCCHHHHHHhccccc------------cCCChhHHHHHHHHHHHHHHHhCCCCCcEEEE-CCcHHHH
Confidence            3456799999999999999999876541            23445556678899999999999986435655 5899999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCcc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHG  222 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG  222 (430)
                      +..++.+++++||+|++..++++++.+...++..| +++.++...    +..+|+++++  +++ ++++|++++++|+||
T Consensus        82 l~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG  157 (396)
T 2ch1_A           82 MEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPP----DRPFSLETLARAIELHQPKCLFLTHGDSSSG  157 (396)
T ss_dssp             HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT----TSCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred             HHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCC----CCCCCHHHHHHHHHhCCCCEEEEECCCCCCc
Confidence            99999999999999999999988876555667778 887787642    2247888887  666 899999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC----CCcc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK----TPLM  292 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~----~p~~  292 (430)
                      .+.|  +|.++ +++|+++++|++|++|..++++..+  |+++.|+||++ ++.|+|++++++++++.+...    .+++
T Consensus       158 ~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~  237 (396)
T 2ch1_A          158 LLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFY  237 (396)
T ss_dssp             EECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGG
T ss_pred             eecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceE
Confidence            9999  67775 6889999999999999988888776  78899999998 589999999999988765321    2223


Q ss_pred             ccccch-------hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610          293 LDYKIH-------DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF  365 (430)
Q Consensus       293 ~~~~~~-------~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~  365 (430)
                      ++....       .......+|++...++++.++|+.+.+ .+++.+.++++++++++++.|++. |+++++.....+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~  315 (396)
T 2ch1_A          238 WDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAE-EGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLP  315 (396)
T ss_dssp             GCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCT
T ss_pred             echHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCC
Confidence            321110       011335578999999999999998653 479999999999999999999974 88776422113455


Q ss_pred             ceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          366 MNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       366 ~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++.|.++......++.++|.++ ||.+.+|..  ..+++||+++. .++++|+++++++|++++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~  382 (396)
T 2ch1_A          316 TVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA  382 (396)
T ss_dssp             TEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence            56778886321233788888765 999877642  24579999954 56899999999999998865

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.6e-34  Score=285.68  Aligned_cols=341  Identities=19%  Similarity=0.243  Sum_probs=267.1

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +.+|+++++|.++++.|++++.+.+.            +++++.+.+..+++++.+++++|.++.+++++ ++|+|+|+.
T Consensus        19 ~~~~l~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~-~~g~t~a~~   85 (386)
T 2dr1_A           19 PKYKLFTAGPVACFPEVLEIMKVQMF------------SHRSKEYRKVHMDTVERLREFLEVEKGEVLLV-PSSGTGIME   85 (386)
T ss_dssp             CCSEECCSSSCCCCHHHHHHTTSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCSSSEEEEE-SSCHHHHHH
T ss_pred             ccceeecCCCcCCcHHHHHHHhcccc------------cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEE-eCChHHHHH
Confidence            46899999999999999999876542            24556667888999999999999972224555 689999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c--CCCccEEEEeecCCCccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q--NPDAKYLHICANETIHGV  223 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i--~~~~~lv~i~~~~t~tG~  223 (430)
                      .++.+++++||+|++..+++++..+...++..| +++.++...    +..+|+++|+  +  ++++++|++++++|+||.
T Consensus        86 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~  161 (386)
T 2dr1_A           86 ASIRNGVSKGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEP----GKAVKPEDLDDALRKNPDVEAVTITYNETSTGV  161 (386)
T ss_dssp             HHHHHHSCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT----TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTE
T ss_pred             HHHHHhhcCCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCC----CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcch
Confidence            999998899999999998887754556667778 777777643    2247888887  5  578999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCC--CCccccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK--TPLMLDY  295 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~--~p~~~~~  295 (430)
                      +.|  +|.++ +++|+++++|++|++|..++++.++  |++++|+||+++ |.|+|++++++++++.+.+.  ..+++++
T Consensus       162 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~  241 (386)
T 2dr1_A          162 LNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDI  241 (386)
T ss_dssp             ECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCH
T ss_pred             hCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeH
Confidence            999  78886 6899999999999999887777655  799999999996 66899999999988776431  2233333


Q ss_pred             cch---hh-cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          296 KIH---DE-NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       296 ~~~---~~-~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                      ...   .. .....+|++...++++..+|+.+.+.+|++++.++++++++++++.|++ .|+++... ...+...++.|.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~~~~~~~~~~~~  319 (386)
T 2dr1_A          242 PLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE-IGLDILAE-PGHESPTITAVL  319 (386)
T ss_dssp             HHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCCBSSC-TTCBCSSEEEEE
T ss_pred             HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-cCCeeCcC-ccccCCceEEEE
Confidence            211   11 2344568999999999999998764337999999999999999999997 48876542 223344567788


Q ss_pred             cCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          372 LEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +++.....++.++|.++||.+.+|..  ..+.+|||++.+++++|+++++++|++++++
T Consensus       320 ~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  378 (386)
T 2dr1_A          320 TPPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINE  378 (386)
T ss_dssp             CCTTCCHHHHHHHHHHTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            87422233799999888999877643  2458999999999999999999999998764

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=100.00  E-value=2.3e-34  Score=283.63  Aligned_cols=339  Identities=19%  Similarity=0.265  Sum_probs=259.8

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHH-HHHHHHHHHHHHHhCCCCCc-EEEEEeCcHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFK-SIIEKAESDLRALLNIPQEY-SVLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~r~~la~l~g~~~~~-~vv~~~~gaT~a~  147 (430)
                      ++++|++||.+.++.|++++.+.+             .|++..+. ..++++|+.+++++|.+.+. ++++ ++|+|+|+
T Consensus         4 ~~~~~~~gp~~~~~~v~~a~~~~~-------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~-~~g~t~a~   69 (366)
T 1m32_A            4 NYLLLTPGPLTTSRTVKEAMLFDS-------------CTWDDDYNIGVVEQIRQQLTALATASEGYTSVLL-QGSGSYAV   69 (366)
T ss_dssp             -CEECSSSSCCCCHHHHHTTCCCC-------------CTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEE-ESCHHHHH
T ss_pred             ccccccCCCcCCCHHHHHHHhhhh-------------cCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEE-ecChHHHH
Confidence            479999999999999999987632             24445555 67889999999999954322 4665 58999999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCccEEEEeecCCCcc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICANETIHG  222 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~~~t~tG  222 (430)
                      +.++.++.++||+|++..+.+|+..+...++..| +++.++...   .+ .+|+++++  ++  +++++|++++++|+||
T Consensus        70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~~~v~~~~~~nptG  145 (366)
T 1m32_A           70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE---VA-RPDVQAIDAILNADPTISHIAMVHSETTTG  145 (366)
T ss_dssp             HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT---TS-CCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred             HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC---CC-CCCHHHHHHHHhcCCCeEEEEEecccCCcc
Confidence            9999999899999988887777654545566778 888887742   22 47888887  44  3689999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC-CCccccc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK-TPLMLDY  295 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~-~p~~~~~  295 (430)
                      .+.|  +|.++ +++|+++++|++|++|..++++.++  |++++|+|||+ ||.|+|++++++++++.+.+. .+++++.
T Consensus       146 ~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~  225 (366)
T 1m32_A          146 MLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDL  225 (366)
T ss_dssp             EECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCH
T ss_pred             eecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccH
Confidence            9999  78776 6889999999999999988887654  79999999998 699999999999998876542 2223221


Q ss_pred             cch-----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          296 KIH-----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       296 ~~~-----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                      ...     ...+...+|++...++++..+++.+.+.++++.+.++++++++++++.|++ .|+++.. ++..+++..+.|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~-~~~~~~~~~~~~  303 (366)
T 1m32_A          226 YAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA-LGFNTLL-DDELHSPIITAF  303 (366)
T ss_dssp             HHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TTCCBSS-CGGGBCSSEEEE
T ss_pred             HHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH-CCCeecc-CchhcCceEEEE
Confidence            110     011233468999999999999998765422899999999999999999997 4877653 211245556778


Q ss_pred             EcCC--CchhHHHHHHHHHcCCeecCCCC-CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          371 TLEK--SDLEAEFVKEAAKEKMVQLKGHR-SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       371 ~~~~--~~~~~~~~~~L~~~Gi~~~~g~~-~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+++  .....++.+.|.++||.+.+|.. ..+++|++++.+++++|+++++++|++++++
T Consensus       304 ~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  364 (366)
T 1m32_A          304 YSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAMYW  364 (366)
T ss_dssp             ECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred             EcCccCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            8763  12233799999999999877643 3468999999999999999999999998764

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=100.00  E-value=9.1e-34  Score=280.66  Aligned_cols=337  Identities=15%  Similarity=0.124  Sum_probs=261.1

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      +|++.++.+++|+.|++++.+.+.+..+.+.+   .+..+....+.++++++.+++++|++++ +++++ +|+|+++..+
T Consensus         2 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~-~g~~~a~~~~   76 (382)
T 4hvk_A            2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS---VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFT-SGATEANNLA   76 (382)
T ss_dssp             CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC---SSHHHHHHHHHHHHHHHHHHHHTTCTTE-EEEEE-SSHHHHHHHH
T ss_pred             EeecCCCcCCCCHHHHHHHHHHHHhhcCCCcc---cchHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEE-CCchHHHHHH
Confidence            68889999999999999999988764433322   1222455678889999999999999864 67665 8899999999


Q ss_pred             HhhcC----CCCCcEEEEeCChhHHHH-HHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          151 PLNLC----TPNDPVDYIVTGSWGDKA-FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       151 ~~sl~----~~gd~vl~~~~g~~~~~~-~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      +.++.    ++||+|++....+.+... ...+++.| +++.++..+   .+ .+|+++++  +++++++|++++++|+||
T Consensus        77 ~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~v~~~~~~nptG  152 (382)
T 4hvk_A           77 IIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK---YG-EVDVSFIDQKLRDDTILVSVQHANNEIG  152 (382)
T ss_dssp             HHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT---TS-CBCHHHHHHHCCTTEEEEECCSBCTTTC
T ss_pred             HHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC---CC-CcCHHHHHHHhccCceEEEEECCCCCce
Confidence            99887    899999987777766432 23344567 777777643   23 57888887  788999999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI  297 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~  297 (430)
                      .+.|  +|.++ +++|+ +++|++|++|..++++..+  |++++|+||++||.|+|+++++++.  .+   .+.+.++. 
T Consensus       153 ~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~---~~~~~~~~-  225 (382)
T 4hvk_A          153 TIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KL---QPVILGGG-  225 (382)
T ss_dssp             BBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CC---CCSSCSSC-
T ss_pred             eeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--Cc---CcccccCC-
Confidence            9999  78886 78999 9999999999988887654  7999999999899999999998765  22   22222111 


Q ss_pred             hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch
Q 043610          298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL  377 (430)
Q Consensus       298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~  377 (430)
                       ...+...+|++...+.++..+++++.+  +++++.++.+++++++++.|.+..|+++.. .+..+.+..+.|.+++. .
T Consensus       226 -~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~  300 (382)
T 4hvk_A          226 -QENGLRSGSENVPSIVGFGKAAEITAM--EWREEAERLRRLRDRIIDNVLKIEESYLNG-HPEKRLPNNVNVRFSYI-E  300 (382)
T ss_dssp             -TGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEECS-CSSSBCTTEEEEEETTC-C
T ss_pred             -CcCccccCCcCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CccccCCCEEEEEECCC-C
Confidence             122334578999999999999987653  689999999999999999999756888764 23334555677887642 2


Q ss_pred             hHHHHHHHHHcCCeecCCCCC---------------------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          378 EAEFVKEAAKEKMVQLKGHRS---------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       378 ~~~~~~~L~~~Gi~~~~g~~~---------------------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..++.+.|.++||.+.+|...                     .+++||+++.+++++|+++++++|++++++
T Consensus       301 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~  372 (382)
T 4hvk_A          301 GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIER  372 (382)
T ss_dssp             HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence            337899999999998765310                     467999999999999999999999998764

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=100.00  E-value=7.7e-34  Score=282.23  Aligned_cols=337  Identities=14%  Similarity=0.191  Sum_probs=257.2

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC----CCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP----QEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~----~~~~vv~~~~gaT  144 (430)
                      ++.++|++||.++++.|++++.+.+.            .++++.+...+.++++.++++++..    ++ +++++ +|+|
T Consensus         4 ~~~~~~~p~p~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~-~g~t   69 (385)
T 2bkw_A            4 SVDTLLIPGPIILSGAVQKALDVPSL------------GHTSPEFVSIFQRVLKNTRAVFKSAAASKSQ-PFVLA-GSGT   69 (385)
T ss_dssp             CCCEECSSSSCCCCHHHHHTTSCCCC------------CTTSHHHHHHHHHHHHHHHHHTTCCGGGTCE-EEEEE-SCTT
T ss_pred             ccceeecCCCcCchHHHHHHHhcccc------------ccCCHHHHHHHHHHHHHHHHHhCCCCCCCCc-eEEEc-CchH
Confidence            56799999999999999999876432            2345666667788899999998874    33 66665 7899


Q ss_pred             HHHHHHHhhcC---CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEec-CCCCcCCCCCCccccc--cCC-CccEEEEee
Q 043610          145 TQFAAVPLNLC---TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS-GKAEKYTKIPNFDALE--QNP-DAKYLHICA  216 (430)
Q Consensus       145 ~a~~~~~~sl~---~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~-~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~  216 (430)
                      ++++.++.++.   ++||+|++++.++++..+...++..| +++.++. ..   .+ .+|+++++  +++ ++++|++++
T Consensus        70 ~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~-~~d~~~l~~~l~~~~~~~v~~~~  145 (385)
T 2bkw_A           70 LGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKI---GE-SVPLELITEKLSQNSYGAVTVTH  145 (385)
T ss_dssp             HHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSST---TS-CCCHHHHHHHHHHSCCSEEEEES
T ss_pred             HHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCC---CC-CCCHHHHHHHHhcCCCCEEEEEc
Confidence            99999999987   89999988877777665545566778 7777776 32   22 47888887  555 899999999


Q ss_pred             cCCCccccCC--CCccc-cCC--CcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHh-ccC-
Q 043610          217 NETIHGVEFK--EYPSA-KNS--TGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLG-NAQ-  286 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~-~~~--g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~-~~~-  286 (430)
                      ++|+||.+.|  +|.++ +++  |+++++|++|++|..++++.++  |++++|+|||+ ||+|+|+++++++.++ .+. 
T Consensus       146 ~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~  225 (385)
T 2bkw_A          146 VDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALND  225 (385)
T ss_dssp             EETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCH
T ss_pred             cCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhh
Confidence            9999999999  78876 677  9999999999999988887765  68999999988 5999999999998877 542 


Q ss_pred             ----CCCCcccc---ccch---h--hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HccCCc
Q 043610          287 ----DKTPLMLD---YKIH---D--ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI-DGSNGF  353 (430)
Q Consensus       287 ----~~~p~~~~---~~~~---~--~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l-~~~~G~  353 (430)
                          +...++.+   +...   .  ..+.+++|++...++++..+++++.+ .|++++.++++++++++++.| ++ .|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-~g~  303 (385)
T 2bkw_A          226 SKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILE-EGLHKRWDLHREMSDWFKDSLVNG-LQL  303 (385)
T ss_dssp             HHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHTT-TCC
T ss_pred             ccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHHHHHh-cCc
Confidence                11111111   1000   1  11233578999999999999998764 478999999999999999999 86 488


Q ss_pred             eecCCCCCC-CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC---CCCeeEEe-ecC---CCCHHHHHHHHHHHHHH
Q 043610          354 YKCPVEKSV-RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR---SVGGMRAS-IYN---AMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       354 ~~~~~~~~~-rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~---~~g~iRis-~~~---~~t~edv~~ll~~L~~~  425 (430)
                      ++...++.. +...++.|.+++   ..++.+.|.++||.+.+|..   ..+.+||| +..   +++++|+++++++|+++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~  380 (385)
T 2bkw_A          304 TSVSRYPSNMSAHGLTAVYVAD---PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLA  380 (385)
T ss_dssp             EESSCSSSTTBCSSCEEEECSC---HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHH
T ss_pred             eecccCcccccCCceEEEecCC---HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHH
Confidence            776322222 344567788874   34799999899999887643   24579999 542   47999999999999998


Q ss_pred             HHh
Q 043610          426 QAK  428 (430)
Q Consensus       426 ~~~  428 (430)
                      +++
T Consensus       381 ~~~  383 (385)
T 2bkw_A          381 LQR  383 (385)
T ss_dssp             TTC
T ss_pred             HHh
Confidence            764

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=100.00  E-value=2.8e-33  Score=277.89  Aligned_cols=337  Identities=15%  Similarity=0.127  Sum_probs=255.6

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      +|++..+++++|+.|++++.+.+.+..+++.+   .+..+..+.+.++++++.+++++|++++ +++++ +|+|+|++.+
T Consensus         2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~~~~   76 (382)
T 4eb5_A            2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS---VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFT-SGATEANNLA   76 (382)
T ss_dssp             CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC---SSHHHHHHHHHHHHHHHHHHHHHTCTTE-EEEEE-SSHHHHHHHH
T ss_pred             eeeccCCCCCCCHHHHHHHHHHHHhccCCCCC---CcHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEc-CchHHHHHHH
Confidence            68888889999999999999988753332221   1222445678889999999999999764 67665 8899999999


Q ss_pred             HhhcC----CCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          151 PLNLC----TPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       151 ~~sl~----~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      +.++.    ++||+|++....+.+.. ....++..| +++.++..+   .+ .+|+++++  +++++++|++++++|+||
T Consensus        77 ~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~v~~~~~~nptG  152 (382)
T 4eb5_A           77 IIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK---YG-EVDVSFIDQKLRDDTILVSVQHANNEIG  152 (382)
T ss_dssp             HHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT---TS-CBCHHHHHHHCCTTEEEEECCSBCTTTC
T ss_pred             HHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC---CC-ccCHHHHHHHhcCCCeEEEEeccCCCcc
Confidence            99987    89999998777766542 222233457 777777642   22 47888887  778899999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKI  297 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~  297 (430)
                      .+.|  +|.++ +++|++ ++|++|++|..++++..+  |++++|+||++||+|+|+++++++.  .+.   +.+..+. 
T Consensus       153 ~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~--~l~---~~~~~~~-  225 (382)
T 4eb5_A          153 TIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQ---PVILGGG-  225 (382)
T ss_dssp             BBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTC--CCC---CSSCSSC-
T ss_pred             ccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEcccc--ccC---ceecCCC-
Confidence            9999  78886 789999 999999999888777644  7999999999999999999998763  111   1111110 


Q ss_pred             hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch
Q 043610          298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL  377 (430)
Q Consensus       298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~  377 (430)
                       .......+|++...+.++..+++++.+  +++.+.++.+++++++.+.|++..|+++.. .+..+...++.|.+++. .
T Consensus       226 -~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~  300 (382)
T 4eb5_A          226 -QENGLRSGSENVPSIVGFGKAAEITAM--EWREEAERLRRLRDRIIDNVLKIEESYLNG-HPEKRLPNNVNVRFSYI-E  300 (382)
T ss_dssp             -TGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEECS-CSSSBCTTEEEEEETTS-C
T ss_pred             -ccccccCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhCCCeEEeC-CcccCCCCEEEEEeCCc-C
Confidence             011234578898888889999987763  589999999999999999999755887753 22223345677887632 2


Q ss_pred             hHHHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          378 EAEFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       378 ~~~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..++.+.|.++||.+.+|..                     ..+.+||+++.+++++|+++++++|++++++
T Consensus       301 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  372 (382)
T 4eb5_A          301 GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIER  372 (382)
T ss_dssp             HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            33799999889999877641                     1357999999999999999999999998764

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=100.00  E-value=3.7e-33  Score=278.68  Aligned_cols=338  Identities=17%  Similarity=0.225  Sum_probs=259.5

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ++.|+++++|.++++.|++++.+.+.            .++++...+.++++++.+++++|.++++++++ ++|+|+|++
T Consensus        33 ~~~~l~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~-t~g~t~al~   99 (393)
T 1vjo_A           33 PSRLLLGPGPSNAHPSVLQAMNVSPV------------GHLDPAFLALMDEIQSLLRYVWQTENPLTIAV-SGTGTAAME   99 (393)
T ss_dssp             CCCEECSSSCCCCCHHHHHHHSSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEE-SSCHHHHHH
T ss_pred             ccceeccCCCCCCCHHHHHHHhcccc------------cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEE-eCchHHHHH
Confidence            46899999999999999999987652            14455677888999999999999975335665 589999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCcccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVE  224 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~  224 (430)
                      .++.+++++||+|++..+++++..+...++..| +++.++...    +..+|+++|+  +++ ++++|++++++|+||.+
T Consensus       100 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~  175 (393)
T 1vjo_A          100 ATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPW----GEVFSLEELRTALETHRPAILALVHAETSTGAR  175 (393)
T ss_dssp             HHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT----TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred             HHHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCC----CCCCCHHHHHHHHhhCCceEEEEeccCCCccee
Confidence            999999999999999988887744555666778 777787643    2247888887  666 89999999999999999


Q ss_pred             CC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCC----CCcccc
Q 043610          225 FK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK----TPLMLD  294 (430)
Q Consensus       225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~----~p~~~~  294 (430)
                      .|  +|.++ +++|+++++|++|++|..++++..+  |++++|+||+++ |.|+|++++++++++.+...    .+++++
T Consensus       176 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~  255 (393)
T 1vjo_A          176 QPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLD  255 (393)
T ss_dssp             CCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTC
T ss_pred             ccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecC
Confidence            99  77776 6889999999999999888887665  799999999995 77899999999988765321    222222


Q ss_pred             cc---chhhcCCCC-CCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          295 YK---IHDENNSLY-NTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       295 ~~---~~~~~~~~~-~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                      ..   ......... +|++...++++..+|+.+.+ .+++++.++++++++++++.|++ .|+++.. ....+.+.++.|
T Consensus       256 ~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~~~~~~~~  332 (393)
T 1vjo_A          256 MNLLGKYWGSERVYHHTAPINLYYALREALRLIAQ-EGLANCWQRHQKNVEYLWERLED-IGLSLHV-EKEYRLPTLTTV  332 (393)
T ss_dssp             HHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSS-CGGGBCSSEEEE
T ss_pred             cHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHHHHH-cCCcccC-CccccCCcEEEE
Confidence            10   001112233 48999999999999998753 47899999999999999999997 4887653 222223456778


Q ss_pred             EcCCCchhHHHHHHHHHc-CCeecCCCC--CCCeeEEeecC-CCCHHHHHHHHHHHHHHH
Q 043610          371 TLEKSDLEAEFVKEAAKE-KMVQLKGHR--SVGGMRASIYN-AMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       371 ~~~~~~~~~~~~~~L~~~-Gi~~~~g~~--~~g~iRis~~~-~~t~edv~~ll~~L~~~~  426 (430)
                      .+++.....++.++|.++ ||.+.+|..  ..+++|||+.. .++++++++++++|++++
T Consensus       333 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          333 CIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             ECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence            876422233799999887 999887653  24689999654 456788999999999876

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=7.6e-34  Score=283.48  Aligned_cols=313  Identities=15%  Similarity=0.151  Sum_probs=242.9

Q ss_pred             cCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC---C
Q 043610          106 MSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC---N  182 (430)
Q Consensus       106 ~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g---~  182 (430)
                      .+|+++.+.+.++++++.+++++|++ + ++++ ++|+|+++++++.. +.+||+|++..+++++..|...++..|   +
T Consensus        26 ~~h~~~~~~~~~~~~~~~l~~~~~~~-~-~v~~-~~sgt~a~~~~~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~  101 (379)
T 3ke3_A           26 LNHMSKAFQEVMNDLLSNLKTVYNAE-A-AVII-PGSGTYGMEAVARQ-LTIDEDCLIIRNGWFSYRWTQILEKGKFAKS  101 (379)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHHHHTCS-E-EEEE-ESCHHHHHHHHHHH-HCTTCEEEEEECSHHHHHHHHHHHHHCCSSE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHhCCC-C-EEEE-cCChhHHHHHHHHh-CCCCCeEEEEeCCchhHHHHHHHHHhCCCCc
Confidence            57889999999999999999999997 2 5554 68999999998754 479999999999999988777777666   3


Q ss_pred             ceEEecCCC--CcCC---CCCCccccc--c-CCCccEEEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCC
Q 043610          183 PQVIWSGKA--EKYT---KIPNFDALE--Q-NPDAKYLHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS  248 (430)
Q Consensus       183 ~~~v~~~~~--~~~g---~~~d~~~l~--i-~~~~~lv~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~  248 (430)
                      ++.++....  ..+.   ..+|+++++  + ++++++|+++|++|++|.++|     +|.++ +++|+++++|++|+ |.
T Consensus       102 ~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~  180 (379)
T 3ke3_A          102 STVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GC  180 (379)
T ss_dssp             EEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TT
T ss_pred             eEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CC
Confidence            444544210  0011   146778876  5 358999999999999999999     35554 58999999999999 99


Q ss_pred             Cccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCC--CCCccccccch------hhcCC--CCCCccHHHHHH
Q 043610          249 KPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD--KTPLMLDYKIH------DENNS--LYNTPPCYCIYM  315 (430)
Q Consensus       249 ~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~------~~~~~--~~~T~~~~~~~a  315 (430)
                      .++++.++  |++++++|||+ ||+|+|++++++++++.+.+  ..++++++..+      .+.+.  +.+|+|+..+++
T Consensus       181 ~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a  260 (379)
T 3ke3_A          181 VWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQ  260 (379)
T ss_dssp             CCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHH
T ss_pred             ccccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHH
Confidence            99888755  79999999999 59999999999999887643  23344443221      12232  236999999999


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCC
Q 043610          316 CGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG  395 (430)
Q Consensus       316 ~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g  395 (430)
                      +.++|+++.+ .|++++.+++++++++++++|.+ .|++++. ++..+++.++.+..++  .+..+.+.|.++||.+.+|
T Consensus       261 ~~aal~~~~~-~g~~~~~~~~~~l~~~l~~~l~~-~g~~~~~-~~~~~~~~i~~~~~~~--~~~~~~~~L~~~Gi~v~~g  335 (379)
T 3ke3_A          261 FRDAILEAKE-IGFDILRDAQWELGNRVRKVLTD-KGIESVA-AEGFEAPGVVVSYTER--DDMHKGSAFAEAGLQIAAG  335 (379)
T ss_dssp             HHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-TTCCBSB-CTTCBCSSEEEEECSC--HHHHSSHHHHHTTCCCEEC
T ss_pred             HHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHH-cCCEecC-CccccCceEEEEccCC--cchHHHHHHHHCCeEEeCC
Confidence            9999998875 48999999999999999999997 6888764 4445677666666543  2223467788899998776


Q ss_pred             CC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          396 HR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       396 ~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..       ..+.+|||++.++|++||++++++|++++++
T Consensus       336 ~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~  375 (379)
T 3ke3_A          336 VPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDE  375 (379)
T ss_dssp             CCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred             ccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence            42       1457999999999999999999999998765

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=100.00  E-value=7.2e-33  Score=275.69  Aligned_cols=347  Identities=14%  Similarity=0.096  Sum_probs=259.9

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      ++.+|++.+++++.|+.|++++.+.+.+....+..   .+...+.+.....++++.+++++|++++ +++++ +|+|+++
T Consensus        15 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~y~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~   89 (390)
T 1elu_A           15 ANKTYFNFGGQGILPTVALEAITAMYGYLQENGPF---SIAANQHIQQLIAQLRQALAETFNVDPN-TITIT-DNVTTGC   89 (390)
T ss_dssp             TTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSS---SHHHHHHHHHHHHHHHHHHHHHTTSCGG-GEEEE-SSHHHHH
T ss_pred             CCeEEecCCccCCCCHHHHHHHHHHHHHHhccCCc---chhhHHHHHHHHHHHHHHHHHHcCCCHH-HEEEe-CChHHHH
Confidence            45678888888888999999999988653211100   0012344456788999999999999765 67765 7899999


Q ss_pred             HHHHhhc-CCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          148 AAVPLNL-CTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       148 ~~~~~sl-~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +.++..+ +++||+|++..+++.+..  |...++..| +++.++...+  .+..+|+++++  +++++++|++++++|+|
T Consensus        90 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~npt  167 (390)
T 1elu_A           90 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAAT--LNQGDAAAVLANHLGPKTRLVILSHLLWNT  167 (390)
T ss_dssp             HHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGG--SSSSCHHHHHHTTCCTTEEEEEEESBCTTT
T ss_pred             HHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCC--CCccchHHHHHHhcCCCceEEEEeccccCC
Confidence            9999999 799999998887777654  334456667 7777776421  12246788886  67889999999999999


Q ss_pred             cccCC--CCccc-c----CCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCc
Q 043610          222 GVEFK--EYPSA-K----NSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPL  291 (430)
Q Consensus       222 G~~~p--ei~~~-~----~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~  291 (430)
                      |.+.|  +|.++ +    ++|+++++|++|++|..++++.++  |++++|+|||+ |+.|+|++++++++++.+.+....
T Consensus       168 G~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g  247 (390)
T 1elu_A          168 GQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVG  247 (390)
T ss_dssp             CCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCC
T ss_pred             ceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCcccc
Confidence            99999  78775 6    899999999999999988877654  79999999977 688999999999888776542210


Q ss_pred             c-----------ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          292 M-----------LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       292 ~-----------~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +           +++.... .....+|++...+.++..+++.+.+.+.++++.++++++++++++.|++..|+++.... 
T Consensus       248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-  325 (390)
T 1elu_A          248 WRSITYGAKGEPTGWAEGG-KRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATS-  325 (390)
T ss_dssp             TTTEEECTTSCEEEECSGG-GGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSS-
T ss_pred             CCcccccccCcccccccch-HhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCc-
Confidence            0           0010000 11234788988999999999987655449999999999999999999975588876311 


Q ss_pred             CCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          361 SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ...+ ..+.|.+++.....++.++|.++||.+.+|. ..+++|||++.+++++|+++++++|+++
T Consensus       326 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~-~~~~iRis~~~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          326 APQA-GLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA-DPDCIRACCHYITDEEEINHLLARLADF  388 (390)
T ss_dssp             CCSS-SEEEEEECSSSCHHHHHHHHHHTTEECEEET-TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             cccc-cEEEEEcCCCCCHHHHHHHHHHCCEEEEecC-CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence            1233 4567777532123379999999999987754 2468999998899999999999999764

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1e-32  Score=276.68  Aligned_cols=342  Identities=11%  Similarity=0.069  Sum_probs=258.1

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +.+|++..+++++|+.|++++.+.+.+...+..+   .+.++......++++++.+++++|++++ +|+++ +|+|++++
T Consensus        26 ~~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~al~  100 (406)
T 3cai_A           26 GWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVG---AHPSARRSAAVLDAAREAVADLVNADPG-GVVLG-ADRAVLLS  100 (406)
T ss_dssp             SCEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCS---SSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SCHHHHHH
T ss_pred             CeEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCC---ccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CChHHHHH
Confidence            3688888888899999999999988754322211   1112344567888999999999999765 67775 78999999


Q ss_pred             HHHhhc---CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          149 AVPLNL---CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       149 ~~~~sl---~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      .++.++   +++||+|++....+.+.  .+...+++.| +++.++...+  .+ .+|+++|+  +++++++|++++++|+
T Consensus       101 ~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~-~~d~~~l~~~l~~~~~~v~~~~~~np  177 (406)
T 3cai_A          101 LLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE--TG-ELPTWQWESLISKSTRLVAVNSASGT  177 (406)
T ss_dssp             HHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT--TC-CCCGGGHHHHCCTTEEEEEEESBCTT
T ss_pred             HHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc--cC-CcCHHHHHHHhCCCceEEEEeCCcCC
Confidence            988887   68899999877666553  2333344567 7777876421  23 47888887  7889999999999999


Q ss_pred             ccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccE-EEEEcHHHHhccCCCCCcccc
Q 043610          221 HGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVT-IVIVRKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       221 tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g-~l~v~~~~~~~~~~~~p~~~~  294 (430)
                      ||.+.|  +|.++ +++|+++++|++|+.|..++++.++  |++++|+||++||. +| ++++++++++.+.+... +++
T Consensus       178 tG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~-~G~~~~~~~~~~~~l~~~~~-~~~  255 (406)
T 3cai_A          178 LGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVST-NPY  255 (406)
T ss_dssp             TCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCS-CEEEEESCHHHHHTSCCCCS-CTT
T ss_pred             ccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCC-cCeEEEEehHHHhhcCCccc-CCC
Confidence            999999  78886 6899999999999999888777654  69999999999975 89 99999998877654221 111


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhc-------------CHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELG-------------GLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~-------------g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      .  ........+|++...+.++..+++++.+.+             +++.+.++.+++++++++.|++..|+++.. ...
T Consensus       256 ~--~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~  332 (406)
T 3cai_A          256 A--TGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIG-RPE  332 (406)
T ss_dssp             C--CGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECC-CCS
T ss_pred             C--CccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcC-Ccc
Confidence            1  011112357899999989999999876432             278999999999999999999755887753 222


Q ss_pred             CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC--------C---CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH--------R---SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~--------~---~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .+++ .+.|.+++ ....++.+.|.++||.+.+|.        .   ..+.+|||++.+++++|+++++++|+++
T Consensus       333 ~~~~-~~~~~~~~-~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          333 AQIP-VVSFAVHK-VPADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             SBCS-EEEEEETT-BCHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             ccCC-EEEEEECC-cCHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence            3455 57788774 123378899989999987654        1   1357999999999999999999999763

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=2.8e-32  Score=272.62  Aligned_cols=346  Identities=16%  Similarity=0.144  Sum_probs=260.5

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEeCcHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~~gaT~a~  147 (430)
                      +.+|+...++++.|+.|++++.+.+.++..+....  .+..+.......+++++.+++++|. +++ +++++ +|+|+|+
T Consensus        23 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~~~-~v~~~-~g~t~a~   98 (406)
T 1kmj_A           23 PLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRG--IHTLSAQATEKMENVRKRASLFINARSAE-ELVFV-RGTTEGI   98 (406)
T ss_dssp             ECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSC--SSHHHHHHHHHHHHHHHHHHHHTTCSCGG-GEEEE-SSHHHHH
T ss_pred             ceEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCC--cchHHHHHHHHHHHHHHHHHHHcCCCCCC-eEEEe-CChhHHH
Confidence            35788888788899999999999887543211100  0111223456788999999999999 443 67775 7899999


Q ss_pred             HHHHhhc----CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          148 AAVPLNL----CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       148 ~~~~~sl----~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      +.++.++    +++||+|++..+++.+.  .+...++..| +++.++..+    +..+|+++++  +++++++|++++++
T Consensus        99 ~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~d~~~l~~~l~~~~~~v~~~~~~  174 (406)
T 1kmj_A           99 NLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP----DGTLQLETLPTLFDEKTRLLAITHVS  174 (406)
T ss_dssp             HHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT----TSCBCGGGHHHHCCTTEEEEEEESBC
T ss_pred             HHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC----CCCcCHHHHHHHhccCCeEEEEeCCC
Confidence            9999999    89999999888877653  2444556667 777777642    2247888887  78899999999999


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc--
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL--  291 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~--  291 (430)
                      |+||.+.|  +|.++ +++|+++++|++|+.|..++++.++  |++++|+||++||+|+|++++++++++.+.+....  
T Consensus       175 nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~~~  254 (406)
T 1kmj_A          175 NVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGS  254 (406)
T ss_dssp             TTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCSTT
T ss_pred             ccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccCCC
Confidence            99999999  78886 6899999999999999887777654  69999999999999999999999998876542210  


Q ss_pred             cc---------cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          292 ML---------DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       292 ~~---------~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.         .+... ......+|++...++++..+++++.+ .+++.+.++.+++++++++.|++..|+++.. .. .
T Consensus       255 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~-~  330 (406)
T 1kmj_A          255 MIATVSLSEGTTWTKA-PWRFEAGTPNTGGIIGLGAALEYVSA-LGLNNIAEYEQNLMHYALSQLESVPDLTLYG-PQ-N  330 (406)
T ss_dssp             SEEEEETTTEEEECCT-TGGGCCSSCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHTTSTTEEEES-CT-T
T ss_pred             ceeecccccccccCCC-chhccCCCCCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CC-C
Confidence            00         00000 01123468888888888889998764 4799999999999999999999755887764 21 2


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++ ..+.|.+++. ...++.+.|.++||.+.+|..          ..+++|||++.+++++|+++++++|+++++.
T Consensus       331 ~~-~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~  404 (406)
T 1kmj_A          331 RL-GVIAFNLGKH-HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRL  404 (406)
T ss_dssp             CC-SEEEEEETTC-CHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             cC-CEEEEEECCC-CHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence            34 4566777632 123688889999999876531          1368999999999999999999999998764

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=3.3e-32  Score=270.13  Aligned_cols=337  Identities=15%  Similarity=0.109  Sum_probs=253.9

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      +|++..+.++.|+.|++++.+.+.+..+.+.+   .++++......++++++.+++++|++++ +++++ +|+|++++.+
T Consensus         3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a~~~~   77 (384)
T 1eg5_A            3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNS---AHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFT-SCATESINWI   77 (384)
T ss_dssp             EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTC---SSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEE-SCHHHHHHHH
T ss_pred             EEEecCccCCCCHHHHHHHHHHHHhcCCCCcc---ccHHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEE-CCHHHHHHHH
Confidence            78888888899999999999988653222221   1223455667888999999999999865 67765 7899999999


Q ss_pred             HhhcC----CCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          151 PLNLC----TPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       151 ~~sl~----~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      +..+.    ++||+|++....+.+.. ....++..| +++.++...   .+ .+|+++|+  +++++++|++++++|+||
T Consensus        78 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~v~~~~~~nptG  153 (384)
T 1eg5_A           78 LKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS---RG-VVKLEELEKLVDEDTFLVSIMAANNEVG  153 (384)
T ss_dssp             HHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT---TS-CBCHHHHHHHCCTTEEEEEEESBCTTTC
T ss_pred             HHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC---CC-ccCHHHHHHHhCCCCeEEEEECCCCCcc
Confidence            99886    78999988776666542 222334567 766666542   22 47888887  778999999999999999


Q ss_pred             ccCC--CCccc-cCCC--cEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccc
Q 043610          223 VEFK--EYPSA-KNST--GILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDY  295 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g--~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~  295 (430)
                      .+.|  +|.++ +++|  +++++|++|++|..++++..+  |++++|+||++||+|+|++++++++  .+   .+.+..+
T Consensus       154 ~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~--~~---~~~~~~~  228 (384)
T 1eg5_A          154 TIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PI---RPLIHGG  228 (384)
T ss_dssp             BBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS--CC---CCSBCSS
T ss_pred             cccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC--cc---ccccccC
Confidence            9999  78886 6788  999999999999887777654  7999999999999999999999875  11   1111111


Q ss_pred             cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC
Q 043610          296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS  375 (430)
Q Consensus       296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~  375 (430)
                      .  .......++++...+.++..+|+...+  +++++.++++++++++++.|.+ .|+++.. .+....+..+.|.+++.
T Consensus       229 ~--~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~~~~~~~~~~~~~~~  302 (384)
T 1eg5_A          229 G--QERGLRSGTQNVPGIVGAARAMEIAVE--ELSEAAKHMEKLRSKLVSGLMN-LGAHIIT-PLEISLPNTLSVSFPNI  302 (384)
T ss_dssp             C--TTTTTBCSCCCHHHHHHHHHHHHHHHH--THHHHHHHHHHHHHHHHHHHHT-TTCEECS-CTTSBCTTEEEEECTTC
T ss_pred             c--ccccccCCCCChHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHhCC-CCeEEeC-CcccCCCCEEEEEeCCC
Confidence            1  011223468899999999999987543  6899999999999999999997 7887763 22223345677877642


Q ss_pred             chhHHHHHHHHHcCCeecCCCCC---------------------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          376 DLEAEFVKEAAKEKMVQLKGHRS---------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       376 ~~~~~~~~~L~~~Gi~~~~g~~~---------------------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       ...++.+.|.++||.+.+|...                     .+++||+++.+++++|+++++++|++++++
T Consensus       303 -~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  375 (384)
T 1eg5_A          303 -RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSF  375 (384)
T ss_dssp             -CHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence             2337889999999998775311                     257999999889999999999999998764

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=1.6e-31  Score=268.57  Aligned_cols=347  Identities=13%  Similarity=0.110  Sum_probs=259.7

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEeCcHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~~gaT~a~~  148 (430)
                      .+++....+.+.|+.|++++.+.+.++..+...  ....++..+...++++++.+++++|. +++ +++++ +|+|+|++
T Consensus        29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~y~~~~~~~~~~l~~~la~~~~~~~~~-~v~~~-~g~t~a~~  104 (420)
T 1t3i_A           29 LVYLDNAATSQKPRAVLEKLMHYYENDNANVHR--GAHQLSVRATDAYEAVRNKVAKFINARSPR-EIVYT-RNATEAIN  104 (420)
T ss_dssp             CEECBTTTCCCCCHHHHHHHHHHHHHTCCCC----CCSHHHHHHHHHHHHHHHHHHHHTTCSCGG-GEEEE-SSHHHHHH
T ss_pred             eEEecCCccCCCCHHHHHHHHHHHHhccCCCCc--ccchHHHHHHHHHHHHHHHHHHHcCCCCCC-eEEEc-CChHHHHH
Confidence            466666777788999999999988764322110  01223334457788999999999999 544 67775 78999999


Q ss_pred             HHHhhc----CCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          149 AVPLNL----CTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       149 ~~~~sl----~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      .++.++    +++||+|++...++.+..  +...++..| +++.++...   .+ .+|+++++  +++++++|++++++|
T Consensus       105 ~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~l~~~~~~v~~~~~~n  180 (420)
T 1t3i_A          105 LVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE---QE-SFDLEHFKTLLSEKTKLVTVVHISN  180 (420)
T ss_dssp             HHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT---TS-SBCHHHHHHHCCTTEEEEEEESBCT
T ss_pred             HHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCC---CC-CcCHHHHHHhhCCCceEEEEeCCcc
Confidence            999999    899999998887777632  444556678 777777642   22 47888887  788999999999999


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc--
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM--  292 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~--  292 (430)
                      +||.+.|  +|.++ +++|+++++|++|++|..++++.++  |++++|+||.+||.|+|++++++++++.+.+.....  
T Consensus       181 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~~~~~~~~~  260 (420)
T 1t3i_A          181 TLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEM  260 (420)
T ss_dssp             TTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTS
T ss_pred             cccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCceEEEEEchHHHhhcCceecCCCc
Confidence            9999999  78886 6899999999999999887776654  799999999889999999999999988765422110  


Q ss_pred             c--------cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC--C
Q 043610          293 L--------DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS--V  362 (430)
Q Consensus       293 ~--------~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~--~  362 (430)
                      .        .|.. ...+...++++...++++..+++++.+ .+++.+.++.+++++++++.|++..|+++......  .
T Consensus       261 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~  338 (420)
T 1t3i_A          261 IAEVFFDHFTTGE-LPHKFEAGTPAIAEAIALGAAVDYLTD-LGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGD  338 (420)
T ss_dssp             EEEECSSCEEECC-TTGGGCCSSCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSC
T ss_pred             cccccccccCCCC-chhhccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccc
Confidence            0        0000 001122468888888888888988764 47899999999999999999997558887642110  1


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCC----------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH----------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~----------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++ ..+.|.+++ ....++.+.|.++||.+.+|.          ...+++|||++.+++++|+++++++|+++++.
T Consensus       339 ~~-~~~~~~~~~-~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~  412 (420)
T 1t3i_A          339 RA-ALASFNVAG-LHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRF  412 (420)
T ss_dssp             BC-SEEEEEETT-BCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             cC-CEEEEEECC-CCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence            34 456777764 112368888999999988763          11457999999999999999999999998764

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=100.00  E-value=1.5e-32  Score=274.73  Aligned_cols=345  Identities=14%  Similarity=0.115  Sum_probs=240.9

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ....+|++.++++++|+.|++++.+.+.+..+++.+.   +..+....+.++++++.+++++|++++ +++++ +|+|+|
T Consensus        18 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~-~g~t~a   92 (400)
T 3vax_A           18 GSHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSR---HEYGIRAKRGVERAREYLASTVSAEPD-ELIFT-SGATES   92 (400)
T ss_dssp             ----CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCH---HHHHHHHHHHHHHHHHHHHHHTTCCGG-GEEEE-SCHHHH
T ss_pred             cCCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCccc---chhHHHHHHHHHHHHHHHHHHcCCCCC-cEEEe-CCHHHH
Confidence            3445899999999999999999999887644433321   122345567788999999999999865 67775 789999


Q ss_pred             HHHHHhhcC----CCCC-cEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          147 FAAVPLNLC----TPND-PVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       147 ~~~~~~sl~----~~gd-~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      ++.++.++.    ++|| +|++....+.+.. .....++.| +++.++..+    +..+|+++++  +++++++|+++++
T Consensus        93 l~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~i~~~~~~v~~~~~  168 (400)
T 3vax_A           93 NNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP----SGRISVEGVMERLRPDTLLVSLMHV  168 (400)
T ss_dssp             HHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT----TCCCCHHHHHTTCCTTEEEEECCSB
T ss_pred             HHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC----CCCcCHHHHHHhcCCCceEEEEECC
Confidence            999999987    7899 9987766665532 122334457 777777643    2257888887  7889999999999


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccccc-ccEEEeCCCccccCCccEEEE-EcHHHHhcc-CCCCCc
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTR-FGVIYAGAQKNVGPSGVTIVI-VRKDLLGNA-QDKTPL  291 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~-~d~~~~s~~K~~gp~G~g~l~-v~~~~~~~~-~~~~p~  291 (430)
                      +|+||.+.|  +|.++ +++|+++++|++|++|..++++.. .|++++|+||++||.|+|+++ ++++.+... ....+.
T Consensus       169 ~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~  248 (400)
T 3vax_A          169 NNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTPIDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPI  248 (400)
T ss_dssp             CTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSCCSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCS
T ss_pred             CCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhcCcEEEEeHHHhCCCCceEEEEEecchhccccccccCce
Confidence            999999999  78886 789999999999999998888766 589999999987999999999 987432210 111222


Q ss_pred             cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                      +..+.  ...+...+|++...++++..+++.+.+  +++++.++++++++++++.|+ ..|+++.. ....+.+..+.|.
T Consensus       249 ~~~~~--~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~-~~~~~~~~~~~~~  322 (400)
T 3vax_A          249 MFGGG--QERKLRPGTLPVPLIMGLAEAAKIFEA--EHAQWQVAAQDLRSRLLAGLA-STSFQVNG-DQDHVVPHILNLS  322 (400)
T ss_dssp             SCSSC--TGGGTSCSCCCHHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHT-TTTCEECS-CTTSBCTTEEEEE
T ss_pred             ecCCC--ceeeeecCCCCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHhhC-CCCEEEeC-CcccCCCCEEEEE
Confidence            21111  122334578999999999999997753  789999999999999999998 68888764 2223444567788


Q ss_pred             cCCCchhHHHHHHHHHcCCeecCCCC-----------------C----CCeeEEee-cCCCCHHHHHHHHHHHHHHHHh
Q 043610          372 LEKSDLEAEFVKEAAKEKMVQLKGHR-----------------S----VGGMRASI-YNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~-----------------~----~g~iRis~-~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +++. ...++.+.|. +||.+.+|..                 .    .+++||++ +.+++++|+++++++|++++++
T Consensus       323 ~~~~-~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~  399 (400)
T 3vax_A          323 FEDV-DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS  399 (400)
T ss_dssp             CTTC-CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred             eCCC-CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence            7742 2337889999 9998766521                 0    36899999 9899999999999999998764

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=100.00  E-value=5.9e-33  Score=284.32  Aligned_cols=347  Identities=11%  Similarity=0.091  Sum_probs=257.8

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+.+|+++.+.++.|+.|.+++.+.+..|...+...+..+  ...+.+..+++++.+++++|++++ +|++ ++|+|+++
T Consensus        66 ~~~iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~g~~~~-~v~~-t~g~t~al  141 (465)
T 3e9k_A           66 ENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVG--KRPWITGDESIVGLMKDIVGANEK-EIAL-MNALTVNL  141 (465)
T ss_dssp             CBCEECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSS--SSCGGGTTHHHHGGGHHHHTCCGG-GEEE-CSCHHHHH
T ss_pred             CCeEEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccC--CccHHHhHHHHHHHHHHHcCCCcC-CEEE-ECCHHHHH
Confidence            4568999888888899999988888866643322111111  123445566889999999999875 7776 58999999


Q ss_pred             HHHHhhcCCCCCc---EEEEeCChhHHH--HHHHHHHhC-Cce----EEecCCCCcCCCCCCccccc--cC---CCccEE
Q 043610          148 AAVPLNLCTPNDP---VDYIVTGSWGDK--AFKEAQKFC-NPQ----VIWSGKAEKYTKIPNFDALE--QN---PDAKYL  212 (430)
Q Consensus       148 ~~~~~sl~~~gd~---vl~~~~g~~~~~--~~~~a~~~g-~~~----~v~~~~~~~~g~~~d~~~l~--i~---~~~~lv  212 (430)
                      +.++.+++++|++   |++....|.+..  |...++..| ++.    .+...+   ....+|+++++  ++   +++++|
T Consensus       142 ~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~---~~~~~d~~~l~~~i~~~~~~~~lv  218 (465)
T 3e9k_A          142 HLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPRE---GEETLRIEDILEVIEKEGDSIAVI  218 (465)
T ss_dssp             HHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCT---TCSSCCHHHHHHHHHHHGGGEEEE
T ss_pred             HHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCC---CCCccCHHHHHHHHHhcCCCeEEE
Confidence            9999999876655   887777766632  434556677 652    121111   22357888887  54   789999


Q ss_pred             EEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc--cCCccEEEEEcHHHHhcc
Q 043610          213 HICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV--GPSGVTIVIVRKDLLGNA  285 (430)
Q Consensus       213 ~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~--gp~G~g~l~v~~~~~~~~  285 (430)
                      ++++++|+||.++|  +|.++ +++|+++++|++|+.|..++++.++  |++++|+||++  ||.|+|++++++++++.+
T Consensus       219 ~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~  298 (465)
T 3e9k_A          219 LFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTI  298 (465)
T ss_dssp             EEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTS
T ss_pred             EEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhc
Confidence            99999999999999  78886 6899999999999999999998866  79999999999  588899999999998765


Q ss_pred             CCCCCccccc--------------cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-
Q 043610          286 QDKTPLMLDY--------------KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-  350 (430)
Q Consensus       286 ~~~~p~~~~~--------------~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-  350 (430)
                      .+....++..              .... .+...||+++..+.++.++++.+.+ .|+++++++..++++++++.|++. 
T Consensus       299 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~a~~aal~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~  376 (465)
T 3e9k_A          299 KPALVGWFGHELSTRFKMDNKLQLIPGV-CGFRISNPPILLVCSLHASLEIFKQ-ATMKALRKKSVLLTGYLEYLIKHNY  376 (465)
T ss_dssp             CCSSCCGGGBCHHHHTTCCSCCCBCSSG-GGGCCSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCcccCccCCCCCcccccCCCcCcCCCh-HHhccCCccHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhhc
Confidence            5432211110              0000 1123469999999999999998875 489999999999999999999874 


Q ss_pred             ---------CCceecCCC-CCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEee-cCCCCHHHHHHHH
Q 043610          351 ---------NGFYKCPVE-KSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASI-YNAMPLAGVEKLV  419 (430)
Q Consensus       351 ---------~G~~~~~~~-~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~-~~~~t~edv~~ll  419 (430)
                               .|++++... +..++ ..++|.++. . ..++.+.|.++||.+..  +..++||||+ +.+++++||++++
T Consensus       377 ~~~~~~~~~~g~~~~~p~~~~~~g-~~~~~~~~~-~-~~~l~~~L~~~Gi~v~~--~~~~~iRis~~~~~~t~edi~~~~  451 (465)
T 3e9k_A          377 GKDKAATKKPVVNIITPSHVEERG-CQLTITFSV-P-NKDVFQELEKRGVVCDK--RNPNGIRVAPVPLYNSFHDVYKFT  451 (465)
T ss_dssp             C---------CEEECSCSSGGGBC-SCEEEEECC-T-TCCHHHHHHTTTEECEE--ETTTEEEEBCCTTTCCHHHHHHHH
T ss_pred             cccccccCCCCeEEeCCCCHhhcc-cEEEEEecC-C-HHHHHHHHHHCCEEEec--CCCCEEEEeCcccCCCHHHHHHHH
Confidence                     688877422 22344 467788762 1 22688999999998753  2346899999 7899999999999


Q ss_pred             HHHHHHHHh
Q 043610          420 AFMKDFQAK  428 (430)
Q Consensus       420 ~~L~~~~~~  428 (430)
                      ++|++++++
T Consensus       452 ~~l~~~l~~  460 (465)
T 3e9k_A          452 NLLTSILDS  460 (465)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHHh
Confidence            999998763

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=100.00  E-value=2.8e-31  Score=267.63  Aligned_cols=344  Identities=13%  Similarity=0.100  Sum_probs=258.4

Q ss_pred             CCCCCceeecCCCCCCcHHHHHHHHHHhh--hccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           66 GQEDRVFNFAAGPANLPEKVLLKAQSELY--NWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        66 ~~~~~~~l~~~gp~~~~~~V~~a~~~~~~--~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      ...+.+|++.++++++|+.|++++.+.+.  +..+.+.+  ..+..+....+.++++++.+++++|++++ +|+++ +|+
T Consensus        19 ~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~-~gg   94 (423)
T 3lvm_A           19 AMKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPAS--RSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFT-SGA   94 (423)
T ss_dssp             -CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTC--TTSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SSH
T ss_pred             ccCCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCc--cccchhHHHHHHHHHHHHHHHHHcCCCCC-eEEEe-CCh
Confidence            34566999999999999999999998876  32222221  01223445567888999999999999875 67775 789


Q ss_pred             HHHHHHHHhhcC----CCCCcEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610          144 TTQFAAVPLNLC----TPNDPVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC  215 (430)
Q Consensus       144 T~a~~~~~~sl~----~~gd~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~  215 (430)
                      |+|++.++.++.    ++||+|++....+.+.. ....++..| +++.++...    +..+|+++++  +++++++|+++
T Consensus        95 t~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~i~~~~~~v~~~  170 (423)
T 3lvm_A           95 TESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR----NGIIDLKELEAAMRDDTILVSIM  170 (423)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT----TSCCCHHHHHHHCCTTEEEEECC
T ss_pred             HHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC----CCccCHHHHHHhcCCCcEEEEEe
Confidence            999999988876    37999998777766542 222234557 777777643    2357888887  78899999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCC
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTP  290 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p  290 (430)
                      +++|+||.+.|  +|.++ +++|+++++|++|++|..++++..+  |++++|+||++||.|+|+++++++.++.+.+.. 
T Consensus       171 ~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~-  249 (423)
T 3lvm_A          171 HVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQM-  249 (423)
T ss_dssp             SBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSS-
T ss_pred             CCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEeccccCCCCccc-
Confidence            99999999999  78886 6889999999999999988887765  799999999889999999999988766543321 


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                        .++.  .......+|++...+.++..+++.+.+  .++.+.++.+++++++++.|++..|+++.. .+..+.+..+.|
T Consensus       250 --~~~~--~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~  322 (423)
T 3lvm_A          250 --HGGG--HERGMRSGTLPVHQIVGMGEAYRIAKE--EMATEMERLRGLRNRLWNGIKDIEEVYLNG-DLEHGAPNILNV  322 (423)
T ss_dssp             --CSSC--TTTTTCCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEEES-CSTTBCTTEEEE
T ss_pred             --cCCc--ccccccCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCEEEeC-CccccCCCeEEE
Confidence              1111  112234578899999999999987764  378999999999999999998755888764 333344556777


Q ss_pred             EcCCCchhHHHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          371 TLEKSDLEAEFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       371 ~~~~~~~~~~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+++. ...++.+.|.+  |.+.+|..                     ..+.+||+++..++++|+++++++|++++++
T Consensus       323 ~~~~~-~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~  398 (423)
T 3lvm_A          323 SFNYV-EGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR  398 (423)
T ss_dssp             EETTS-CHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EeCCC-CHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            77542 22367777766  55555421                     0367999999999999999999999998764

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.97  E-value=2.1e-30  Score=260.65  Aligned_cols=340  Identities=13%  Similarity=0.133  Sum_probs=246.9

Q ss_pred             CCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           66 GQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        66 ~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      ...+.+|++..++++.|+.|++++.+.+.+.++...+   .++....+.+.++++++.+++++|++++ +|++ ++|+++
T Consensus        25 ~~~~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~-~~g~t~   99 (416)
T 1qz9_A           25 LPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLI---RSWNSAGWRDLSERLGNRLATLIGARDG-EVVV-TDTTSI   99 (416)
T ss_dssp             CCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGG---GHHHHTSGGGHHHHHHHHHHTTTTCCTT-SEEE-CSCHHH
T ss_pred             CCCCeEeecCCCcCCCcHHHHHHHHHHHHHHHhccCc---cccchhhHHHHHHHHHHHHHHHcCCCcc-cEEE-eCChhH
Confidence            3456788888888889999999999988642221110   0011112346678999999999999765 7777 488999


Q ss_pred             HHHHHHhhcC------CCCCcEEEEeCChhHH---HHHHHHHHh--C-CceEEecCCCCcCCCCCCccccc--cCCCccE
Q 043610          146 QFAAVPLNLC------TPNDPVDYIVTGSWGD---KAFKEAQKF--C-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKY  211 (430)
Q Consensus       146 a~~~~~~sl~------~~gd~vl~~~~g~~~~---~~~~~a~~~--g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~l  211 (430)
                      ++..++..+.      ++||+++++..++|+.   .+...++..  | +++.++.           +++++  +++++++
T Consensus       100 al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----------~~~l~~~i~~~~~~  168 (416)
T 1qz9_A          100 NLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-----------PEELPQAIDQDTAV  168 (416)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-----------GGGHHHHCSTTEEE
T ss_pred             HHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-----------HHHHHHHhCCCceE
Confidence            9988888765      8899877777665552   122233344  6 5544432           45665  6788999


Q ss_pred             EEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCcc-EEEEEcHHHHhc
Q 043610          212 LHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGV-TIVIVRKDLLGN  284 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~-g~l~v~~~~~~~  284 (430)
                      |++++++|+||.+.|  +|.++ +++|+++++|++|++|..++++..+  |++++|+||++ +++|+ |++++++++++.
T Consensus       169 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~  248 (416)
T 1qz9_A          169 VMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDL  248 (416)
T ss_dssp             EEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTT
T ss_pred             EEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhc
Confidence            999999999999999  78886 6889999999999999988777654  79999999998 56677 999999998776


Q ss_pred             cCCCCCccc------cccch-----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-C-
Q 043610          285 AQDKTPLML------DYKIH-----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-N-  351 (430)
Q Consensus       285 ~~~~~p~~~------~~~~~-----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~-  351 (430)
                      +.+....+.      ++...     ...+...+|++...++++.++++.+. ..+++++.++++++++++++.|.+. . 
T Consensus       249 l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~  327 (416)
T 1qz9_A          249 VPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFA-QTDMASLRRKSLALTDLFIELVEQRCAA  327 (416)
T ss_dssp             SCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            544221110      00000     01122457899999999999999765 3589999999999999999999874 3 


Q ss_pred             -CceecCCCCC-CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          352 -GFYKCPVEKS-VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       352 -G~~~~~~~~~-~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                       |+++...... .++ .++.|.+++   ..++.+.|.++||.+..  ...+.+||+++. +++++|+++++++|++++++
T Consensus       328 ~g~~~~~~~~~~~~~-~~~~~~~~~---~~~l~~~l~~~gi~~~~--~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~  401 (416)
T 1qz9_A          328 HELTLVTPREHAKRG-SHVSFEHPE---GYAVIQALIDRGVIGDY--REPRIMRFGFTPLYTTFTEVWDAVQILGEILDR  401 (416)
T ss_dssp             SCCEECSCSSGGGBC-SEEEEECTT---HHHHHHHHHTTTEECEE--ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEeCCCCHHHcC-CEEEEecCC---HHHHHHHHHhCCcEecc--CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence             7877642111 133 457777763   34799999999988642  124579999984 89999999999999998764

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.97  E-value=4.8e-31  Score=267.01  Aligned_cols=349  Identities=17%  Similarity=0.131  Sum_probs=238.1

Q ss_pred             ccCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           64 QSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      +....+.+|++..++.++|+.|++++.+.+.+..+.+.+   .+..+..+.+.++++|+.+++++|++++ +|+++ +|+
T Consensus        13 ~~~~~~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~   87 (432)
T 3a9z_A           13 ESPPNRKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSS---SYVAGRKAKDIINTARASLAKMIGGKPQ-DIIFT-SGG   87 (432)
T ss_dssp             -----CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTC---SSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SCH
T ss_pred             cCCCCCcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCcc---CcHHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEe-CCh
Confidence            444556789998888899999999999988653322221   1112345667889999999999999765 67775 789


Q ss_pred             HHHHHHHHhhcC--------CCCCcEEEEeCChhH-------------H--HHHHHHHHhC-CceEEecCCCCcCCCCCC
Q 043610          144 TTQFAAVPLNLC--------TPNDPVDYIVTGSWG-------------D--KAFKEAQKFC-NPQVIWSGKAEKYTKIPN  199 (430)
Q Consensus       144 T~a~~~~~~sl~--------~~gd~vl~~~~g~~~-------------~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d  199 (430)
                      |++++.++.++.        ++||+|++..+++.+             .  .|...++..| +++.++..+.  .+ .+|
T Consensus        88 t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~--~~-~~d  164 (432)
T 3a9z_A           88 TESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV--NG-QVE  164 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT--TS-SCC
T ss_pred             HHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc--cC-CcC
Confidence            999999988875        488877665544322             1  1333344567 7777776421  23 478


Q ss_pred             ccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCC----------cEEEEeccCcCCCCccccccc--cEEEeC
Q 043610          200 FDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNST----------GILVADMSSNFCSKPVDVTRF--GVIYAG  262 (430)
Q Consensus       200 ~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g----------~~lvvD~a~s~G~~~idl~~~--d~~~~s  262 (430)
                      +++|+  +++++++|++++++|+||.+.|  +|.++ +++|          +++++|++|++|..++++.++  |+++.|
T Consensus       165 ~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s  244 (432)
T 3a9z_A          165 VEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIV  244 (432)
T ss_dssp             HHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEE
T ss_pred             HHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEe
Confidence            88887  7888999999999999999999  78776 5677          999999999999888777544  789999


Q ss_pred             CCccccCCccEEEEEcHHH-HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          263 AQKNVGPSGVTIVIVRKDL-LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       263 ~~K~~gp~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      +|||+||. +|+++++++. ...+   .+.++++..  ......+|++...++++.++++++.+  +++++.++++++++
T Consensus       245 ~~K~~g~~-~G~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~~  316 (432)
T 3a9z_A          245 GHKFYGPR-IGALYVRGVGKLTPL---YPMLFGGGQ--ERNFRPGTENTPMIAGLGKAADLVSE--NCETYEAHMRDIRD  316 (432)
T ss_dssp             GGGTTCCS-CEEEEETTBTTTBCC---CCSCCSSCG--GGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred             hhHhcCCc-ceEEEEccccccCCc---CceeecCCc--cccccCCCcCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHH
Confidence            99999987 9999999875 3322   233332211  12234578999999999999997753  68999999999999


Q ss_pred             HHHHHHHccCCceec--CC-CCCCCccceEEEEcCCCchhH-HHHHHHH----HcCCeecCCC-----------C-----
Q 043610          342 LLYNVIDGSNGFYKC--PV-EKSVRSFMNVPFTLEKSDLEA-EFVKEAA----KEKMVQLKGH-----------R-----  397 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~--~~-~~~~rs~~iv~f~~~~~~~~~-~~~~~L~----~~Gi~~~~g~-----------~-----  397 (430)
                      ++++.|.+..|+.+.  .. +...+.+.++.|.+++.+.+. ++.+.|.    +.|+.+.+++           +     
T Consensus       317 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~  396 (432)
T 3a9z_A          317 YLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDV  396 (432)
T ss_dssp             HHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHH
T ss_pred             HHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccc
Confidence            999999874465442  11 112345557778877422223 4555442    1233222210           0     


Q ss_pred             CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          398 SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       398 ~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+++|||++.+++++|+++++++|++++++
T Consensus       397 ~~~~iRis~~~~~t~eei~~~~~~l~~~~~~  427 (432)
T 3a9z_A          397 ARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ  427 (432)
T ss_dssp             HTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             cCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence            1257999999999999999999999998753

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.96  E-value=3.4e-29  Score=247.64  Aligned_cols=333  Identities=12%  Similarity=0.032  Sum_probs=238.7

Q ss_pred             CCceeec-CCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHH-HHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFA-AGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESD-LRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~-~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~-la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.+|++. .+..++++.|++++.+.+....+.+...  .++.+.......+++++. +++++|.+   +++++ +|+|+|
T Consensus         8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~la~~~~~~---~v~~~-~g~t~a   81 (371)
T 2e7j_A            8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCT--TGRLDEIKTPPIHDFIHNQLPKFLGCD---VARVT-NGAREA   81 (371)
T ss_dssp             CCEECCHHHHTCCCCHHHHHHHHHC----------------------CCHHHHHHTHHHHHTTSS---EEEEE-SSHHHH
T ss_pred             CcEEecccccCCCCCHHHHHHHHHHHhhcccCCccc--cccchhhHHHHHHHHHHHHHHHHcCCC---EEEEe-CChHHH
Confidence            3456655 5567789999999998875432111100  111222334556789999 99999986   56664 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEe--cCCCCcCCCCCCccccc--cC-----CCccEEEEee
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIW--SGKAEKYTKIPNFDALE--QN-----PDAKYLHICA  216 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~--~~~~~~~g~~~d~~~l~--i~-----~~~~lv~i~~  216 (430)
                      +..++.+++++||+|++..+++.+...  .++..| +++.++  ..+    +..+|+++++  ++     +++++|++++
T Consensus        82 ~~~~~~~~~~~gd~vl~~~~~~~~~~~--~~~~~g~~~~~v~~~~~~----~~~~d~~~l~~~l~~~~~~~~~~~v~~~~  155 (371)
T 2e7j_A           82 KFAVMHSLAKKDAWVVMDENCHYSSYV--AAERAGLNIALVPKTDYP----DYAITPENFAQTIEETKKRGEVVLALITY  155 (371)
T ss_dssp             HHHHHHHHCCTTCEEEEETTCCHHHHH--HHHHTTCEEEEECCCCTT----TCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred             HHHHHHHHhCCCCEEEEccCcchHHHH--HHHHcCCeEEEeecccCC----CCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence            999999998999999988888777543  356677 777777  432    2247888887  55     7899999999


Q ss_pred             cCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhc-cCCCC
Q 043610          217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGN-AQDKT  289 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~-~~~~~  289 (430)
                      ++|+||.+.|  +|.++ +++|+++++|++|+.|..++++..+  |++++|+||+++ |.|+|++++++++++. +.+..
T Consensus       156 ~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~  235 (371)
T 2e7j_A          156 PDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSE  235 (371)
T ss_dssp             SCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCS
T ss_pred             CCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccc
Confidence            9999999999  78886 6899999999999999887776654  699999999995 7789999999988776 54322


Q ss_pred             CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH--HHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN--RKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~--~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..+..     ..+...++++...++++..+++++.+     .+.++.  +++++++++.|++. |+++.. ....++ ..
T Consensus       236 ~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~~~~~~-~~  302 (371)
T 2e7j_A          236 KYKNK-----EVELLGCTARGATIITLMASFPHVRE-----RIKRWDEEVEKARRFAAEMEKL-GIKQLG-DNPHNH-DL  302 (371)
T ss_dssp             SCTTS-----BGGGTTCCCCSHHHHHHHHHHHHHHH-----HGGGHHHHHHHHHHHHHHHHHT-TCEEES-SSSCCS-SE
T ss_pred             cCccc-----ccccccCCcCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHc-CcEEec-CCCccC-ce
Confidence            11100     00112468888888888888987652     677788  88999999999974 887763 211133 35


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecCC---C----CCCCeeE-EeecCC-CCHHHHHHHHHHHHHHHHhh
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLKG---H----RSVGGMR-ASIYNA-MPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g---~----~~~g~iR-is~~~~-~t~edv~~ll~~L~~~~~~~  429 (430)
                      +.+.++   ...++.+.|.++||.+.+.   .    ...+.+| ++++.+ ++++|+++++++|++++++.
T Consensus       303 ~~~~~~---~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~  370 (371)
T 2e7j_A          303 MFFHAE---VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY  370 (371)
T ss_dssp             EEEECH---HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEECC---CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence            667765   1236888888889987541   0    1145799 999988 89999999999999998764

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.96  E-value=9.6e-28  Score=238.55  Aligned_cols=325  Identities=14%  Similarity=0.018  Sum_probs=235.9

Q ss_pred             ecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhh
Q 043610           74 FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN  153 (430)
Q Consensus        74 ~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~s  153 (430)
                      ++.+..++++.+++++.+.+....+..       ...+...+..+++++.+++++|++++ +++++ +|+|+++..++..
T Consensus        35 ~~~~~~~~~~~v~~a~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~la~~~~~~~~-~i~~~-~ggt~a~~~~~~~  105 (397)
T 3f9t_A           35 FGSMCSNVLPITRKIVDIFLETNLGDP-------GLFKGTKLLEEKAVALLGSLLNNKDA-YGHIV-SGGTEANLMALRC  105 (397)
T ss_dssp             CSCSCCCCCTHHHHHHHHHTTCCTTSG-------GGBHHHHHHHHHHHHHHHHHTTCTTC-EEEEE-SCHHHHHHHHHHH
T ss_pred             EEEecCCCcHHHHHHHHHHHhhcCCCc-------ccChhHHHHHHHHHHHHHHHhCCCCC-CEEEe-cCcHHHHHHHHHH
Confidence            444556677899999998875321110       12346678888999999999999876 77765 7899999999888


Q ss_pred             cCCC-------------CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEee
Q 043610          154 LCTP-------------NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICA  216 (430)
Q Consensus       154 l~~~-------------gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~  216 (430)
                      +..+             ||+|++..+.+.+.  ...++..| +++.++..+   . ..+|+++++  +++ ++++|++++
T Consensus       106 ~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~v~~~~---~-~~~d~~~l~~~i~~~~~~~v~~~~  179 (397)
T 3f9t_A          106 IKNIWREKRRKGLSKNEHPKIIVPITAHFSF--EKGREMMDLEYIYAPIKE---D-YTIDEKFVKDAVEDYDVDGIIGIA  179 (397)
T ss_dssp             HHHHHHHHHHTTCCCCSSCEEEEETTCCTHH--HHHHHHHTCEEEEECBCT---T-SSBCHHHHHHHHHHSCCCEEEEEB
T ss_pred             HHHHHHhhhhhcccCCCCeEEEECCcchhHH--HHHHHHcCceeEEEeeCC---C-CcCCHHHHHHHHhhcCCeEEEEEC
Confidence            7654             89999887777663  34556678 777787643   2 247888887  666 899999999


Q ss_pred             cCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--------------ccccc-cccEEEeCCCccc-cCCccEEEEE
Q 043610          217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--------------PVDVT-RFGVIYAGAQKNV-GPSGVTIVIV  277 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--------------~idl~-~~d~~~~s~~K~~-gp~G~g~l~v  277 (430)
                      ++|+||.+.|  +|.++ +++|+++++|++|+.+..              ++++. ..|+++.++||++ ++.++|++++
T Consensus       180 ~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~  259 (397)
T 3f9t_A          180 GTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILF  259 (397)
T ss_dssp             SCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCEEEEE
T ss_pred             CCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCceEEEE
Confidence            9999999999  78886 689999999999985533              33333 4579999999999 5778999999


Q ss_pred             cHHHH-hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          278 RKDLL-GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       278 ~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      +++.+ +.+....+++.. ..   .....+|++.....++.++++.+. ..++++..++.+++++++++.|++. |+.++
T Consensus       260 ~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  333 (397)
T 3f9t_A          260 KDIGYKRYLDVDAPYLTE-TR---QATILGTRVGFGGACTYAVLRYLG-REGQRKIVNECMENTLYLYKKLKEN-NFKPV  333 (397)
T ss_dssp             SSGGGGGGTCEECTTSSS-SE---ECSSCSSCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred             eCHHHHHhhccCCccccC-CC---ccccccccccchHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
Confidence            76643 333221221111 00   111224555455666666676654 3478899999999999999999974 87755


Q ss_pred             CCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          357 PVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      . ++  .. ..+.|.+++   ..++.+.|.++||.+.++.. .+++||+++.+++++|+++++++|+++++
T Consensus       334 ~-~~--~~-~~~~~~~~~---~~~~~~~l~~~gi~v~~~~~-~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          334 I-EP--IL-NIVAIEDED---YKEVCKKLRDRGIYVSVCNC-VKALRIVVMPHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             S-CC--SS-SEEEEECTT---HHHHHHHHHHTTCBCEECSS-SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred             c-CC--Cc-cEEEEEeCC---HHHHHHHHHhCCeEEeccCC-CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence            3 21  23 356677653   34789999999999876542 46899999999999999999999998764

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.96  E-value=4e-27  Score=232.56  Aligned_cols=309  Identities=9%  Similarity=0.035  Sum_probs=230.1

Q ss_pred             CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.+++|+.|  |.++++.|++++.+.+.++          ..+ +.  ....++|+.+++++|++++ +++++ +|+|++
T Consensus        32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----------~~y-~~--~~~~~lr~~la~~~~~~~~-~v~~~-~g~t~a   96 (363)
T 3ffh_A           32 TKITKLSSNENPLGTSKKVAAIQANSSVET----------EIY-PD--GWASSLRKEVADFYQLEEE-ELIFT-AGVDEL   96 (363)
T ss_dssp             SCCEECSSCSCTTCCCHHHHHHHHTCBSCC----------CBC-------CHHHHHHHHHHHTCCGG-GEEEE-SSHHHH
T ss_pred             CceEEccCCCCCCCCCHHHHHHHHHHHHHh----------hcC-CC--cchHHHHHHHHHHhCCChh-hEEEe-CCHHHH
Confidence            456777665  3567899999998866421          111 11  2346889999999998775 77775 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      ++.++.+++++||+|++..+.+.+.  ...++..| +++.++..+    +..+|+++++  +++++++|++++++|+||.
T Consensus        97 ~~~~~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~  170 (363)
T 3ffh_A           97 IELLTRVLLDTTTNTVMATPTFVQY--RQNALIEGAEVREIPLLQ----DGEHDLEGMLNAIDEKTTIVWICNPNNPTGN  170 (363)
T ss_dssp             HHHHHHHHCSTTCEEEEEESSCHHH--HHHHHHHTCEEEEEECCT----TSCCCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred             HHHHHHHHccCCCEEEEcCCChHHH--HHHHHHcCCEEEEecCCC----CCCcCHHHHHHhcccCCCEEEEeCCCCCcCC
Confidence            9999999999999999888876653  34566678 888887753    2357888887  7889999999999999999


Q ss_pred             cCC--CCccc-cCC--CcEEEEeccCcCCCC---c--ccc-ccc--cEEEeCCCccccCCcc--EEEEEcHHHHhccCCC
Q 043610          224 EFK--EYPSA-KNS--TGILVADMSSNFCSK---P--VDV-TRF--GVIYAGAQKNVGPSGV--TIVIVRKDLLGNAQDK  288 (430)
Q Consensus       224 ~~p--ei~~~-~~~--g~~lvvD~a~s~G~~---~--idl-~~~--d~~~~s~~K~~gp~G~--g~l~v~~~~~~~~~~~  288 (430)
                      ++|  ++.++ +..  |+++++|++|+.+..   +  +.. ...  .+++.|++|++|++|+  |++++++++++.+.+.
T Consensus       171 ~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~  250 (363)
T 3ffh_A          171 YIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIV  250 (363)
T ss_dssp             CCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHT
T ss_pred             CcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHh
Confidence            999  55554 222  999999999883221   1  111 112  2778999999998886  9999999988764321


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      .              ..+++|...++++..+|+..   ..++.+.++++++++++++.|++..|+.+.+ .   .+ ..+
T Consensus       251 ~--------------~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~-~---~~-~~~  308 (363)
T 3ffh_A          251 R--------------PPFNTTSIGQKLAIEAIKDQ---AFIGECRTSNANGIKQYEAFAKRFEKVKLYP-A---NG-NFV  308 (363)
T ss_dssp             C--------------CSCCCBHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHHCTTCEECC-C---CS-SEE
T ss_pred             C--------------CCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHhhCCCceECC-C---CC-eEE
Confidence            1              12467888888888888742   2578899999999999999999757887753 1   23 345


Q ss_pred             EEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       369 ~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .+.++.  ...++.+.|.++||.+.+|..  ..+++|||++   +++|+++++++|+++
T Consensus       309 ~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          309 LIDLGI--EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEKL  362 (363)
T ss_dssp             EEECSS--CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred             EEECCC--CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence            677763  234799999999999877643  2568999987   899999999999876

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.96  E-value=8.9e-27  Score=229.14  Aligned_cols=312  Identities=10%  Similarity=0.005  Sum_probs=232.7

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .+.+++|+.|.  .++++.|++++.+.+.+.          .++..   ....++|+.+++++|++++ +++++ +|+++
T Consensus        15 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----------~~y~~---~~~~~l~~~la~~~~~~~~-~i~~~-~g~~~   79 (354)
T 3ly1_A           15 TDNPIRINFNENPLGMSPKAQAAARDAVVKA----------NRYAK---NEILMLGNKLAAHHQVEAP-SILLT-AGSSE   79 (354)
T ss_dssp             SSSCEECSSCCCSSCCCHHHHHHHHHTGGGT----------TSCCH---HHHHHHHHHHHHHTTSCGG-GEEEE-SHHHH
T ss_pred             CCceEEccCCCCCCCCCHHHHHHHHHHHhhC----------cCCCC---CchHHHHHHHHHHhCCChH-HEEEe-CChHH
Confidence            45566666653  567899999999877531          12222   2456899999999999765 77775 89999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCccEEEEeecCCC
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICANETI  220 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~~~t~  220 (430)
                      +++.++..++++||+|++..+.+.+.  ...++..| +++.++..+    +..+|+++++  ++  +++++|++++++|+
T Consensus        80 a~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~----~~~~d~~~l~~~l~~~~~~~~v~l~~p~np  153 (354)
T 3ly1_A           80 GIRAAIEAYASLEAQLVIPELTYGDG--EHFAKIAGMKVTKVKMLD----NWAFDIEGLKAAVAAYSGPSIVYLVNPNNP  153 (354)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECCCT----TSCCCHHHHHHHHHTCSSCEEEEEESSCTT
T ss_pred             HHHHHHHHHhCCCCeEEECCCCchHH--HHHHHHcCCEEEEecCCC----CCCCCHHHHHHHhccCCCCCEEEEeCCCCC
Confidence            99999999999999999887776654  34566778 777777643    2357888887  65  89999999999999


Q ss_pred             ccccCC--CCccc---cCCCcEEEEeccCcCCCCc------cc-cc---cccEEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610          221 HGVEFK--EYPSA---KNSTGILVADMSSNFCSKP------VD-VT---RFGVIYAGAQKNVGPSG--VTIVIVRKDLLG  283 (430)
Q Consensus       221 tG~~~p--ei~~~---~~~g~~lvvD~a~s~G~~~------id-l~---~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~  283 (430)
                      ||.++|  ++.++   .++|+++++|++|+.....      +. +.   +.++++.|++|++|++|  +|++++++++++
T Consensus       154 tG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~  233 (354)
T 3ly1_A          154 TGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIA  233 (354)
T ss_dssp             TCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHH
T ss_pred             cCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHH
Confidence            999999  55554   2589999999998743321      11 12   22388999999999767  799999998877


Q ss_pred             ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      .+....              ..+++|...++++..+|+..   ..++.++++++++++++++.|.+ .|+.+.+  +  .
T Consensus       234 ~~~~~~--------------~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~--~--~  291 (354)
T 3ly1_A          234 LMGRYV--------------AGEKINFSGVDAALASMNDS---AFITYSKKSNDVSRQILLKALED-LKLPYLP--S--E  291 (354)
T ss_dssp             HHGGGT--------------TCSCCCHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHHH-HTCCBCC--C--C
T ss_pred             HHHHhc--------------CCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHH-CCCeECC--C--C
Confidence            653211              12577888888888888743   25788999999999999999987 4776543  1  2


Q ss_pred             ccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          364 SFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      + ..+.+.+++  ...++.+.|.++||.+. |..  ..+++|||++   +++|+++++++|+++++++
T Consensus       292 ~-~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~~~  352 (354)
T 3ly1_A          292 G-NFVFHQLVV--PLKDYQTHMADAGVLIG-RAFPPADNWCRISLG---TPQEMQWVADTMREFRKKS  352 (354)
T ss_dssp             S-SEEEEECSS--CHHHHHHHHHHTTEECC-CCCTTCTTEEEEECC---CHHHHHHHHHHHHHHHHTT
T ss_pred             c-eEEEEECCC--CHHHHHHHHHHCCEEEe-ecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHhh
Confidence            3 345677764  23479999999999977 432  3468999986   7999999999999998764

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.95  E-value=5e-27  Score=232.07  Aligned_cols=310  Identities=11%  Similarity=0.043  Sum_probs=229.2

Q ss_pred             CCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.+++|+.|  |.++++.|++++.+.+......+         ...    ..++|+.+++++|++++ +|+++ +|++++
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~---------~~~----~~~lr~~la~~~~~~~~-~v~~~-~g~~~a   94 (365)
T 3get_A           30 KEVIKLASNENPFGTPPKAIECLRQNANKAHLYP---------DDS----MIELKSTLAQKYKVQNE-NIIIG-AGSDQV   94 (365)
T ss_dssp             SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCC---------CTT----CHHHHHHHHHHHTCCGG-GEEEE-SSHHHH
T ss_pred             CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCC---------CCC----hHHHHHHHHHHhCCCcc-eEEEC-CCHHHH
Confidence            456666654  45678999999998875321111         011    13788999999998765 77775 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      ++.++.+++++||+|++..+.+.+.  ...++..| +++.++. .+  .+. +|+++++  +++++++|++++++|+||.
T Consensus        95 ~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~v~~-~~--~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~  168 (365)
T 3get_A           95 IEFAIHSKLNSKNAFLQAGVTFAMY--EIYAKQCGAKCYKTQS-IT--HNL-DEFKKLYETHKDEIKLIFLCLPNNPLGE  168 (365)
T ss_dssp             HHHHHHHHCCTTCEEEECSSCCTHH--HHHHHHHTCEEEECSS-SS--CCH-HHHHHHHHHTTTTEEEEEEESSCTTTCC
T ss_pred             HHHHHHHHhCCCCEEEEeCCChHHH--HHHHHHcCCEEEEEec-CC--CCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCC
Confidence            9999999999999999877766653  34566677 7777766 11  234 7888887  7889999999999999999


Q ss_pred             cCC--CCccc---cCCCcEEEEeccCc------CCCCccccc------cccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          224 EFK--EYPSA---KNSTGILVADMSSN------FCSKPVDVT------RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       224 ~~p--ei~~~---~~~g~~lvvD~a~s------~G~~~idl~------~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      ++|  ++.++   .++|+++++|++|+      .+..+.+..      ..++++.|++|++|++|  +|++++++++++.
T Consensus       169 ~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  248 (365)
T 3get_A          169 CLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISA  248 (365)
T ss_dssp             CCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHH
T ss_pred             CcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHH
Confidence            999  55554   36799999999988      333333321      12388899999998767  8999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +...              ...+++|...++++..+|+..   ..++.++++++++++++++.|.+ .|+.+.+  +  .+
T Consensus       249 ~~~~--------------~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~--~--~~  306 (365)
T 3get_A          249 FYKL--------------RAPFNVSNLALKAAVAAMDDD---EFTEKTLENNFSQMELYKEFAKK-HNIKIID--S--YT  306 (365)
T ss_dssp             HHHH--------------SCTTCSCHHHHHHHHHHHTCH---HHHHHHHHHHHHHHHHHHHHHHH-TTCEECC--C--SS
T ss_pred             HHHh--------------cCCCCcCHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHh-CCCEECC--C--CC
Confidence            4320              011357888888888888742   25788999999999999999997 4887653  1  23


Q ss_pred             cceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC-CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          365 FMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS-VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~-~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       ..+.+.+++. ...++.+.|.++||.+.+|... .+++|||++   +++|+++++++|++++
T Consensus       307 -~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          307 -NFITYFFDEK-NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             -SEEEEECSSS-CHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred             -eEEEEECCCC-CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence             2356777742 2337999999999998776422 468999987   8999999999999876

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.95  E-value=2.7e-26  Score=228.70  Aligned_cols=328  Identities=13%  Similarity=0.114  Sum_probs=227.8

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcE-EEEEeCcHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYS-VLFLQGGAT  144 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~-vv~~~~gaT  144 (430)
                      .++.|+.|-  .+.++.+++++.+.+.+.    ...|..   .....+..+.+.+.+++.+|.  +++ + ++++ +|++
T Consensus        27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~l~~~la~~~~~~~g~~~~~~-~~v~~~-~g~~   97 (389)
T 1gd9_A           27 DVISLGIGEPDFDTPQHIKEYAKEALDKG----LTHYGP---NIGLLELREAIAEKLKKQNGIEADPK-TEIMVL-LGAN   97 (389)
T ss_dssp             SCEECCCCSCSSCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHHHCCCCCTT-TSEEEE-SSTT
T ss_pred             CeEecCCCCCCCCCCHHHHHHHHHHHhCC----CCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCCC-CeEEEc-CChH
Confidence            455555543  246889999998887541    111111   111233334444445454584  454 6 7765 7899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +++..++.+++++||+|++..+++.+..  ..++..| +++.++...+  .+..+|+++++  +++++++|++++++|+|
T Consensus        98 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~npt  173 (389)
T 1gd9_A           98 QAFLMGLSAFLKDGEEVLIPTPAFVSYA--PAVILAGGKPVEVPTYEE--DEFRLNVDELKKYVTDKTRALIINSPCNPT  173 (389)
T ss_dssp             HHHHHHHTTTCCTTCEEEEEESCCTTHH--HHHHHHTCEEEEEECCGG--GTTCCCHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHCCCEEEEeccCCc--cCCCCCHHHHHHhcCcCceEEEEECCCCCC
Confidence            9999999999899999999888877743  4456677 7777776431  22346888887  67789999999999999


Q ss_pred             cccCC-----CCccc-cCCCcEEEEeccCcCCCC----ccccc------cccEEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610          222 GVEFK-----EYPSA-KNSTGILVADMSSNFCSK----PVDVT------RFGVIYAGAQKNVGPSG--VTIVIVRKDLLG  283 (430)
Q Consensus       222 G~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~idl~------~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~  283 (430)
                      |.+++     +|.++ +++|+++++|++|+.+..    +..+.      ..|+++.|+||++|++|  +|++++++++++
T Consensus       174 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  253 (389)
T 1gd9_A          174 GAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE  253 (389)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHH
T ss_pred             CcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHH
Confidence            99997     34554 589999999999986643    22222      23689999999999888  799999998877


Q ss_pred             ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      .+...            .....++++...++++..+|+......+++.+.++++++++++.+.|++ .|+++..  +  .
T Consensus       254 ~l~~~------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~  316 (389)
T 1gd9_A          254 RMVKF------------QMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE-MGLPTVK--P--K  316 (389)
T ss_dssp             HHHHH------------HTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCC--C--C
T ss_pred             HHHHH------------HhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH-cCCeecC--C--C
Confidence            64220            0012246677888888888875332125788899999999999999997 4876643  1  1


Q ss_pred             ccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          364 SFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ....+.+.+++.+.+. ++.+.|. ++||.+.+|..    ..+++|||++.  ++++++++++.|++++++.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~~  386 (389)
T 1gd9_A          317 GAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT--AYEKLEEAMDRMERVLKER  386 (389)
T ss_dssp             BTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred             eeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence            2333445665211233 7888887 88999876532    14579999985  8999999999999988754

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.95  E-value=8.3e-27  Score=232.11  Aligned_cols=329  Identities=11%  Similarity=0.020  Sum_probs=233.2

Q ss_pred             CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCc
Q 043610           67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGG  142 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~g  142 (430)
                      ..+++++|..|.  .+.++.|++++.+.+.+.         ..+++....+..+++++.+++.+|  ++++ +|+++ +|
T Consensus        25 ~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~---------~~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~i~~~-~g   93 (391)
T 3dzz_A           25 LKEKELPMWIAEMDFKIAPEIMASMEEKLKVA---------AFGYESVPAEYYKAVADWEEIEHRARPKED-WCVFA-SG   93 (391)
T ss_dssp             CCTTCEECCSSCCSSCCCHHHHHHHHHHHTTC---------CCCCBCCCHHHHHHHHHHHHHHHSCCCCGG-GEEEE-SC
T ss_pred             cCCCceeccccCCCCCCCHHHHHHHHHHHhcC---------cCCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEC-CC
Confidence            345677777664  467899999999887531         111111234666788888999988  4454 67664 78


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecC
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANE  218 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~  218 (430)
                      ++++++.++.+++++||+|++..+.+.+.  ...++..| +++.++...+ +....+|+++++  ++ +++++|++++++
T Consensus        94 ~~~a~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~v~i~~p~  170 (391)
T 3dzz_A           94 VVPAISAMVRQFTSPGDQILVQEPVYNMF--YSVIEGNGRRVISSDLIYE-NSKYSVNWADLEEKLATPSVRMMVFCNPH  170 (391)
T ss_dssp             HHHHHHHHHHHHSCTTCEEEECSSCCHHH--HHHHHHTTCEEEECCCEEE-TTEEECCHHHHHHHHTSTTEEEEEEESSB
T ss_pred             HHHHHHHHHHHhCCCCCeEEECCCCcHHH--HHHHHHcCCEEEEeeeeec-CCceeecHHHHHHHHhccCceEEEEECCC
Confidence            99999999999999999999877776653  34566677 7776665311 011136888887  65 789999999999


Q ss_pred             CCccccCC-----CCccc-cCCCcEEEEeccCcCCC----Ccccccc-----cc--EEEeCCCccccCCc--cEEEEEc-
Q 043610          219 TIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS----KPVDVTR-----FG--VIYAGAQKNVGPSG--VTIVIVR-  278 (430)
Q Consensus       219 t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~----~~idl~~-----~d--~~~~s~~K~~gp~G--~g~l~v~-  278 (430)
                      |+||.+++     +|.++ +++|+++++|++|+.+.    .+.++..     .|  +++.|+||++|++|  +|+++++ 
T Consensus       171 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~  250 (391)
T 3dzz_A          171 NPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN  250 (391)
T ss_dssp             TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS
T ss_pred             CCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC
Confidence            99999987     35554 58999999999987532    2233322     35  88999999998667  8999997 


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecC
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCP  357 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~  357 (430)
                      +++++.+...       .   . ....++++...+.++..+++...  ..++.+.++++++++++++.|++ ..|+.+..
T Consensus       251 ~~~~~~~~~~-------~---~-~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  317 (391)
T 3dzz_A          251 PDLRARAEES-------F---F-LAGIGEPNLLAIPAAIAAYEEGH--DWLRELKQVLRDNFAYAREFLAKEVPEVKVLD  317 (391)
T ss_dssp             HHHHHHHHHH-------H---H-HHTCSSCCTTHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC
T ss_pred             HHHHHHHHHH-------H---H-hhccCCCCHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec
Confidence            7777654210       0   0 01124567777888888887532  24788999999999999999997 55887753


Q ss_pred             CCCCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          358 VEKSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       358 ~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                        +  .....+.+.++..+.+. ++.++|. ++||.+.+|..    ..+++|||++  +++++++++++.|++++++
T Consensus       318 --~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~  388 (391)
T 3dzz_A          318 --S--NASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLN  388 (391)
T ss_dssp             --C--CBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHT
T ss_pred             --c--CceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence              1  12334446666322233 7999984 88999877642    2367999998  5899999999999998875

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.95  E-value=3.6e-26  Score=233.25  Aligned_cols=330  Identities=13%  Similarity=-0.045  Sum_probs=229.1

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCc----EEEEEeCcHHHHHHHHHhhc
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEY----SVLFLQGGATTQFAAVPLNL  154 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~----~vv~~~~gaT~a~~~~~~sl  154 (430)
                      ++.++.+.+++.+.+....   .    ....++...++.+++++.+++++|.+.+.    .+++ ++|+|+++..++.++
T Consensus        52 ~~~~~~v~e~~~~a~~~~~---~----~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~-t~ggtea~~~al~a~  123 (452)
T 2dgk_A           52 TWDDENVHKLMDLSINKNW---I----DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN-TIGSSEACMLGGMAM  123 (452)
T ss_dssp             CCCCHHHHHHHHHTTTCBT---T----CTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEE-ESSHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHhccCC---C----ChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEE-eCCHHHHHHHHHHHH
Confidence            3566788888887764211   0    11235777888899999999999998652    3565 588999999888776


Q ss_pred             CC--------CC-----CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          155 CT--------PN-----DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       155 ~~--------~g-----d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      ..        +|     ++|++.. .+++  +...++..| +++.++..+  + +..+|+++|+  +++++++|++++++
T Consensus       124 ~~~~~~~~~~~G~~~~~~~vi~~~-~h~~--~~~~~~~~G~~v~~v~~~~--~-~~~~d~~~l~~~i~~~t~~v~~~~~~  197 (452)
T 2dgk_A          124 KWRWRKRMEAAGKPTDKPNLVCGP-VQIC--WHKFARYWDVELREIPMRP--G-QLFMDPKRMIEACDENTIGVVPTFGV  197 (452)
T ss_dssp             HHHHHHHHHHTTCCCSCCEEEESS-CCHH--HHHHHHHTTCEEEECCCBT--T-BCSCCHHHHHHHCCTTEEEEECBBSC
T ss_pred             HHHHHHHHHhcCCCCCCcEEEECC-CcHH--HHHHHHHcCceEEEEecCC--C-CCeECHHHHHHHHhhCCEEEEEEcCC
Confidence            42        44     4666544 4433  344566678 777777642  1 2357889987  78899999999999


Q ss_pred             CCccccCC--CCccc-cC------CCcEEEEeccCcCCCC-------cccc--ccccEEEeCCCccc-cCCccEEEEEcH
Q 043610          219 TIHGVEFK--EYPSA-KN------STGILVADMSSNFCSK-------PVDV--TRFGVIYAGAQKNV-GPSGVTIVIVRK  279 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~------~g~~lvvD~a~s~G~~-------~idl--~~~d~~~~s~~K~~-gp~G~g~l~v~~  279 (430)
                      |+||.+.|  +|.++ ++      +|++++||++|+.+..       +.++  ...|++++++|||+ +|.|+|++++++
T Consensus       198 n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~  277 (452)
T 2dgk_A          198 TYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRD  277 (452)
T ss_dssp             TTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESS
T ss_pred             cCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcC
Confidence            99999999  78886 45      4999999999986543       2333  24578999999999 599999999975


Q ss_pred             H-HH-hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecC
Q 043610          280 D-LL-GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP  357 (430)
Q Consensus       280 ~-~~-~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~  357 (430)
                      + .+ +.+. ..+.|+...  .......++.+.....++..+++.+.. .|++++.+++.++++++.++|.+..|++++.
T Consensus       278 ~~~~~~~~~-~~~~~~~~~--~~~~~~~~~r~~~~~~~~~aal~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  353 (452)
T 2dgk_A          278 EEALPQELV-FNVDYLGGQ--IGTFAINFSRPAGQVIAQYYEFLRLGR-EGYTKVQNASYQVAAYLADEIAKLGPYEFIC  353 (452)
T ss_dssp             GGGSCGGGC-EEECCTTCC--EEECCSCCSCBCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred             HHHHHHHhc-cCccccCCC--CCCcccCCCChhHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEec
Confidence            4 33 3321 112232110  001112345555555666666776553 4789999999999999999999755688763


Q ss_pred             CC-CCCCccceEEEEcCCCc---hh-HHHHHHHHHcCCeec----CCCC-CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          358 VE-KSVRSFMNVPFTLEKSD---LE-AEFVKEAAKEKMVQL----KGHR-SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       358 ~~-~~~rs~~iv~f~~~~~~---~~-~~~~~~L~~~Gi~~~----~g~~-~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .. +.... .+++|.+++..   .+ .++.++|.++||.+.    ++.. ..+.+|||++.++|++|++++++.|+++++
T Consensus       354 ~~~~~~~~-~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~  432 (452)
T 2dgk_A          354 TGRPDEGI-PAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK  432 (452)
T ss_dssp             ECCTTTBS-SEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCe-EEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence            11 11233 57888887421   23 479999999998632    2211 134799999999999999999999998765

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.95  E-value=3.5e-26  Score=226.13  Aligned_cols=311  Identities=13%  Similarity=0.058  Sum_probs=227.4

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEeCcHHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI-PQEYSVLFLQGGATT  145 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~~gaT~  145 (430)
                      +++++|+.|.  .++|+.|++++.+.+.+....        .+...   ...++|+.+++++|+ +++ +|+++ +|+|+
T Consensus        30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~--------~y~~~---~~~~l~~~la~~~g~~~~~-~i~~~-~g~t~   96 (367)
T 3euc_A           30 HGLVKLDAMENPYRLPPALRSELAARLGEVALN--------RYPVP---SSEALRAKLKEVMQVPAGM-EVLLG-NGSDE   96 (367)
T ss_dssp             TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTT--------CSCCC---CHHHHHHHHHHHHTCCTTC-EEEEE-EHHHH
T ss_pred             CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhh--------cCCCC---cHHHHHHHHHHHhCCCCcc-eEEEc-CCHHH
Confidence            4566666654  557899999999887632111        11111   245888999999999 444 77765 78999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIH  221 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~t  221 (430)
                      +++.++.+++++||+|++..+.+.+..  ..++..| +++.++..+    +..+|+++++  +++ ++++|++++++|+|
T Consensus        97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~~v~~~~~~npt  170 (367)
T 3euc_A           97 IISMLALAAARPGAKVMAPVPGFVMYA--MSAQFAGLEFVGVPLRA----DFTLDRGAMLAAMAEHQPAIVYLAYPNNPT  170 (367)
T ss_dssp             HHHHHHHHTCCTTCEEEEEESCSCCSC--HHHHTTTCEEEEEECCT----TSCCCHHHHHHHHHHHCCSEEEEESSCTTT
T ss_pred             HHHHHHHHHcCCCCEEEEcCCCHHHHH--HHHHHcCCeEEEecCCC----CCCCCHHHHHHHhhccCCCEEEEcCCCCCC
Confidence            999999999999999998887776532  3455677 777787753    2247888887  666 89999999999999


Q ss_pred             cccCC--C---Cccc-cCC--CcEEEEeccCcCCCC-c--cccccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccC
Q 043610          222 GVEFK--E---YPSA-KNS--TGILVADMSSNFCSK-P--VDVTRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQ  286 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~--g~~lvvD~a~s~G~~-~--idl~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~  286 (430)
                      |.+++  +   |.++ +++  |+++++|++|+.... .  ..+...  ++++.|++|+ +++|  +|++++++++++.+.
T Consensus       171 G~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~  249 (367)
T 3euc_A          171 GNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLD  249 (367)
T ss_dssp             CCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHG
T ss_pred             CCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHH
Confidence            99998  3   4443 578  999999999763221 1  122223  3788999999 7666  799999998877643


Q ss_pred             CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                      ..              ...+++|...++++..+|+. .  ..++.+.++++++++++.+.|++..|+.+.+  +  .+ .
T Consensus       250 ~~--------------~~~~~~~~~~~~a~~~~l~~-~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~--~~-~  307 (367)
T 3euc_A          250 KV--------------RPPYNVNVLTEATALFALEH-V--AVLDEQAAQLRAERSRVAEGMAAHGGVTVFP--S--AA-N  307 (367)
T ss_dssp             GG--------------CCSSCCCHHHHHHHHHHHTT-H--HHHHHHHHHHHHHHHHHHHHHHTSTTCEECC--C--SS-S
T ss_pred             Hh--------------CCCCCCCHHHHHHHHHHhcC-H--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--C--CC-e
Confidence            21              11246788888888888875 2  2578899999999999999999755887543  1  23 3


Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          367 NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       367 iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .+.+.+++   ..++.+.|.++||.+.+|..    ..+++|||++   +++|+++++++|+++++
T Consensus       308 ~~~~~~~~---~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l~  366 (367)
T 3euc_A          308 FLLARVPD---AAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAASLQ  366 (367)
T ss_dssp             EEEEECSC---HHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred             EEEEECCC---HHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHHHhc
Confidence            45566651   33788899999999876542    2468999987   89999999999998764

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.95  E-value=1.5e-26  Score=231.38  Aligned_cols=322  Identities=12%  Similarity=0.049  Sum_probs=228.3

Q ss_pred             CCCceeecCCC--C-CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           68 EDRVFNFAAGP--A-NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        68 ~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      .+.+++|+.|-  . +.++.+++++.+.+.++. .+...+   .......+..+++++.+++++|.+   +++++ +|++
T Consensus        42 g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~---~~~~g~~~~~~~l~~~la~~~g~~---~v~~~-~ggt  113 (398)
T 3a2b_A           42 GRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYG-TGCAGS---RFLNGTLDIHVELEEKLSAYVGKE---AAILF-STGF  113 (398)
T ss_dssp             TEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHC-SCCCSB---TTTTCCCHHHHHHHHHHHHHHTCS---EEEEE-SSHH
T ss_pred             CceEEEeecccccCCCCCHHHHHHHHHHHHHcC-CCCCCc---CcccCCcHHHHHHHHHHHHHhCCC---cEEEE-CCHH
Confidence            34567777763  2 278899999998886532 111111   001112355678999999999973   67775 7899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC----CccEEEEeec
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP----DAKYLHICAN  217 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~----~~~lv~i~~~  217 (430)
                      +++..++..++++||+|++..+.|.+..  ..++..| +++.++.         +|+++++  +++    ++++|+++++
T Consensus       114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~--~~~~~~g~~~~~v~~---------~d~~~l~~~l~~~~~~~~~~v~~~~~  182 (398)
T 3a2b_A          114 QSNLGPLSCLMGRNDYILLDERDHASII--DGSRLSFSKVIKYGH---------NNMEDLRAKLSRLPEDSAKLICTDGI  182 (398)
T ss_dssp             HHHHHHHHHSSCTTCEEEEETTCCHHHH--HHHHHSSSEEEEECT---------TCHHHHHHHHHTSCSSSCEEEEEESB
T ss_pred             HHHHHHHHHHhCCCCEEEECCccCHHHH--HHHHHcCCceEEeCC---------CCHHHHHHHHHhhccCCceEEEEeCC
Confidence            9999999999999999987776665542  3455567 6555543         4566666  433    7899999999


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCCC---cccc------cc-ccEEEeCCCccccCCccEEEEEcHHHHhc
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK---PVDV------TR-FGVIYAGAQKNVGPSGVTIVIVRKDLLGN  284 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~---~idl------~~-~d~~~~s~~K~~gp~G~g~l~v~~~~~~~  284 (430)
                      +|+||.+.|  +|.++ +++|+++++|++|+.+..   ..++      .+ .|+++.|+||++||+| |++++++++++.
T Consensus       183 ~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~  261 (398)
T 3a2b_A          183 FSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG-GFVAGDADVIDF  261 (398)
T ss_dssp             CTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EEEEECHHHHHH
T ss_pred             CCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC-cEEEeCHHHHHH
Confidence            999999999  78886 688999999999986642   1111      12 3799999999999999 999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +.....   .+       ...++++.....++..+|+.+.   .++.+.++++++++++++.|++ .|+++.+  +  .+
T Consensus       262 l~~~~~---~~-------~~~~~~~~~~~a~~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~g  323 (398)
T 3a2b_A          262 LKHNAR---SV-------MFSASMTPASVASTLKALEIIQ---NEPEHIEKLWKNTDYAKAQLLD-HGFDLGA--T--ES  323 (398)
T ss_dssp             HHHHCH---HH-------HSSBCCCHHHHHHHHHHHHHHH---HCTHHHHHHHHHHHHHHHHHHH-TTCCBCS--C--CS
T ss_pred             HHHhcc---cc-------eecCCCCHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHHHh-cCCCcCC--C--CC
Confidence            432110   00       0113444444445667887653   2467889999999999999997 5876643  2  23


Q ss_pred             cceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC-----CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          365 FMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS-----VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~-----~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       ..+.+.+++ +.+. ++.+.|.++||.+.+|...     .+++||+++.+++++|+++++++|++++++.
T Consensus       324 -~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~  392 (398)
T 3a2b_A          324 -PILPIFIRS-NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA  392 (398)
T ss_dssp             -SEEEEECCC-HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             -CEEEEEcCC-HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence             356677764 2333 7889998889998765321     3579999999999999999999999988753

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.95  E-value=1.8e-26  Score=229.63  Aligned_cols=324  Identities=11%  Similarity=0.057  Sum_probs=229.6

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT  144 (430)
                      +.+++|+.|.  .+.|+.|++++.+.+.+    +.     .+++....+..+++++.+++++|  ++++ +++++ +|+|
T Consensus        32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~~-----~~y~~~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~-~g~~  100 (391)
T 4dq6_A           32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQ----EI-----YGYTTRPDSYNESIVNWLYRRHNWKIKSE-WLIYS-PGVI  100 (391)
T ss_dssp             SCSEECCSSSCSSCCCHHHHHHHHHHHTT----CC-----CCCBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SCHH
T ss_pred             CCceeccccCCCCCCCHHHHHHHHHHHhC----CC-----CCCCCCCHHHHHHHHHHHHHHhCCCCcHH-HeEEc-CChH
Confidence            4556666554  46789999999988753    11     11111224667789999999999  5554 67765 7899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecC-CCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSG-KAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~-~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      ++++.++..++++||+|++..+++.+..  ..++..| +++.++.. .. +....+|+++++  +++ +++|++++++|+
T Consensus       101 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~-~~~~~~d~~~l~~~l~~-~~~v~i~~p~np  176 (391)
T 4dq6_A          101 PAISLLINELTKANDKIMIQEPVYSPFN--SVVKNNNRELIISPLQKLE-NGNYIMDYEDIENKIKD-VKLFILCNPHNP  176 (391)
T ss_dssp             HHHHHHHHHHSCTTCEEEECSSCCTHHH--HHHHHTTCEEEECCCEECT-TSCEECCHHHHHHHCTT-EEEEEEESSBTT
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCCHHHH--HHHHHcCCeEEeeeeeecC-CCceEeeHHHHHHHhhc-CCEEEEECCCCC
Confidence            9999999999999999998777776642  3556677 77777664 11 011236888887  666 999999999999


Q ss_pred             ccccCC--C---Cccc-cCCCcEEEEeccCcCC----CCccccccc-------cEEEeCCCccccCCc--cEEEEEcH-H
Q 043610          221 HGVEFK--E---YPSA-KNSTGILVADMSSNFC----SKPVDVTRF-------GVIYAGAQKNVGPSG--VTIVIVRK-D  280 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G----~~~idl~~~-------d~~~~s~~K~~gp~G--~g~l~v~~-~  280 (430)
                      ||.+++  +   |.++ +++|+++++|++|+.+    ..+.++..+       .+++.|++|++|++|  +|++++++ +
T Consensus       177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  256 (391)
T 4dq6_A          177 VGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEK  256 (391)
T ss_dssp             TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHH
T ss_pred             CCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHH
Confidence            999988  3   4444 5899999999998863    222333322       278899999998767  78888875 6


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVE  359 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~  359 (430)
                      +.+.+...          ... ...++++...+.++..+++...  ..++.+.++++++++++++.|++ .+|+.+..  
T Consensus       257 ~~~~~~~~----------~~~-~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--  321 (391)
T 4dq6_A          257 DYKLLDDA----------FTR-IDIKRNNCFSLVATEASYNNGE--SWLESFLEYLESNIDFAIKYINENMPKLKVRK--  321 (391)
T ss_dssp             HHHHHHHH----------HHH-TTCCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC--
T ss_pred             HHHHHHHH----------HHh-hcCCCCCHHHHHHHHHHHhchH--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEecC--
Confidence            66553210          000 1235788888888888887532  23688899999999999999987 45887753  


Q ss_pred             CCCCccceEEEEcCCCchhH-HHHHHHHHc-CCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEA-EFVKEAAKE-KMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~-Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +  .....+.+.++..+.+. ++.+.|.++ ||.+.+|..    ..+++|||++  +++++++++++.|++++
T Consensus       322 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          322 P--EGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI  390 (391)
T ss_dssp             C--SBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred             C--CccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence            1  23334446666312233 799999887 999876532    2368999998  58999999999999876

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.95  E-value=2.7e-26  Score=229.01  Aligned_cols=324  Identities=13%  Similarity=0.109  Sum_probs=229.7

Q ss_pred             CCCceeecCCCC---CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           68 EDRVFNFAAGPA---NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        68 ~~~~~l~~~gp~---~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      .+.+++|+.|..   ..++.+++++.+.+.++. .+.+.   +..........+++++.+++++|.+   +.++++ +||
T Consensus        42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~-~~~~~---~~~~~g~~~~~~~l~~~la~~~~~~---~~i~~~-sGt  113 (399)
T 3tqx_A           42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQYG-FGMAS---VRFICGTQTIHKELEKDISEFLGTD---DTILYS-SCF  113 (399)
T ss_dssp             TEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHC-SCCCS---CCCCCCCBHHHHHHHHHHHHHHTCS---EEEEES-CHH
T ss_pred             CeeEEEeeccCcccccCCHHHHHHHHHHHHHhC-CCCCC---cCccccCchHHHHHHHHHHHHHCCC---cEEEEC-chH
Confidence            344666766631   347899999998887642 11110   0111111245678999999999986   345554 568


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEe
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHIC  215 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~  215 (430)
                      +++..++.+++++||.|++..+.|.+.  ...++..| +++.++.         .|+++++  +.+      ++++|+++
T Consensus       114 ~a~~~~l~~~~~~gd~v~~~~~~~~~~--~~~~~~~g~~~~~~~~---------~d~~~l~~~l~~~~~~~~~~~~v~~~  182 (399)
T 3tqx_A          114 DANGGLFETLLGPEDAIISDELNHASI--IDGIRLCKAQRYRYKN---------NAMGDLEAKLKEADEKGARFKLIATD  182 (399)
T ss_dssp             HHHHTTHHHHCCTTCEEEEETTCCHHH--HHHHHSCCSEEEEECT---------TCTTHHHHHHHHHHTTTCSSEEEEEE
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccHHH--HHHHHHcCCceeEeCC---------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence            999999989999999998766655543  23444556 5554543         3445554  322      79999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc------ccc----ccccEEEeCCCcccc-CCccEEEEEcHHH
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP------VDV----TRFGVIYAGAQKNVG-PSGVTIVIVRKDL  281 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~------idl----~~~d~~~~s~~K~~g-p~G~g~l~v~~~~  281 (430)
                      +++|+||.+.|  +|.++ +++|+++++|++|+.|...      ++.    ...|+++.|+||++| ++| |+++.++++
T Consensus       183 ~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~  261 (399)
T 3tqx_A          183 GVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHKEI  261 (399)
T ss_dssp             SEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECHHH
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCHHH
Confidence            99999999999  78886 6899999999999766532      121    234799999999997 999 999999998


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+......+          ...++++...+.++..+++.+.  .+.+.+.++++++++++++.|.+ .|+++.+  + 
T Consensus       262 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~-  325 (399)
T 3tqx_A          262 IEWLRNRSRPY----------LFSNTVAPVIVATSLKVLELLK--TEGPQLRKQLQENSRYFRAGMEK-LGFQLVP--G-  325 (399)
T ss_dssp             HHHHHHHCHHH----------HSSCCCCHHHHHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHH-HTCCBCC--C-
T ss_pred             HHHHHHhCcce----------eccCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHH-cCCCcCC--C-
Confidence            87643211100          1135778888888888998763  26899999999999999999997 4776652  1 


Q ss_pred             CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       .+ ..+.+.+++.....++.++|.++||.+.++..     ..+++||+++.+++++|+++++++|++++++.
T Consensus       326 -~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  396 (399)
T 3tqx_A          326 -NH-PIIPVMLGDAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL  396 (399)
T ss_dssp             -SS-SEEEEEEECHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             -CC-CEEEEEeCCHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence             23 34666776421223799999999999765321     12479999999999999999999999998753

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.95  E-value=6.7e-26  Score=229.46  Aligned_cols=324  Identities=13%  Similarity=0.078  Sum_probs=232.2

Q ss_pred             CCCCceeecCCC--C-CCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           67 QEDRVFNFAAGP--A-NLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        67 ~~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      ..+.+++|+.|-  . ..++.|++++.+.+.++. +.+.+.+   ..+  .....+++++.|++++|.+   +++++ ++
T Consensus        62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~---~~G--~~~~~~~l~~~la~~~g~~---~~i~~-~s  132 (427)
T 2w8t_A           62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRM---LNG--TFHDHMEVEQALRDFYGTT---GAIVF-ST  132 (427)
T ss_dssp             TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTT---TTC--CCHHHHHHHHHHHHHHTCS---EEEEE-SC
T ss_pred             CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCccccc---ccC--CcHHHHHHHHHHHHHhCCC---ceEEe-cC
Confidence            345567777773  2 367899999999887642 1221111   111  1245668899999999985   45665 56


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC----CccEEEEe
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP----DAKYLHIC  215 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~----~~~lv~i~  215 (430)
                      |++++..++..++++||.|++....+.+.  ...++..| +++.++         ..|+++|+  +.+    ++++|+++
T Consensus       133 Gs~a~~~al~~l~~~gd~vl~~~~~h~~~--~~~~~~~g~~~~~~~---------~~d~~~le~~l~~~~~~~~~~v~~~  201 (427)
T 2w8t_A          133 GYMANLGIISTLAGKGEYVILDADSHASI--YDGCQQGNAEIVRFR---------HNSVEDLDKRLGRLPKEPAKLVVLE  201 (427)
T ss_dssp             HHHHHHHHHHHHSCTTCEEEEETTCCHHH--HHHHHHSCSEEEEEC---------TTCHHHHHHHHHTSCSSSCEEEEEE
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCcccHHH--HHHHHHcCCeeEEeC---------CCCHHHHHHHHHhccCCCCeEEEEc
Confidence            78899998888889999888765554443  23344556 544443         14666665  433    78999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------cccc-cccEEEeCCCccccCCccEEEEEcHHHH
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VDVT-RFGVIYAGAQKNVGPSGVTIVIVRKDLL  282 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------idl~-~~d~~~~s~~K~~gp~G~g~l~v~~~~~  282 (430)
                      +++|++|.+.|  +|.++ +++|+++++|++|+.|...         +++. +.|+++.|++|++|++| |+++++++++
T Consensus       202 ~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g-G~v~~~~~l~  280 (427)
T 2w8t_A          202 GVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG-GFVVSNHPKF  280 (427)
T ss_dssp             SEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC-EEEEECCTTG
T ss_pred             CCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC-CEEEeCHHHH
Confidence            99999999999  78886 6899999999999987654         4443 34799999999999889 9999998887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+.+....+          ...++++...+.++.++|+.+.   .++++.++++++++++++.|.+ .|+.+.. .+ .
T Consensus       281 ~~l~~~~~~~----------~~~~~~~~~~~aa~~~al~~~~---~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~-~  344 (427)
T 2w8t_A          281 EAVRLACRPY----------IFTASLPPSVVATATTSIRKLM---TAHEKRERLWSNARALHGGLKA-MGFRLGT-ET-C  344 (427)
T ss_dssp             GGGGGTCHHH----------HSSCCCCHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHHHHH-HTCEESC-SS-C
T ss_pred             HHHHHhcccc----------cccCCCCHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH-cCCcccC-CC-C
Confidence            7654321111          0124677777888888898764   2578999999999999999997 4887652 11 1


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC-----CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS-----VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~-----~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+ .++.+.+++.....++.+.|.++||.+.++...     .+++||+++.+++++|+++++++|++++++
T Consensus       345 ~~-~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~  414 (427)
T 2w8t_A          345 DS-AIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA  414 (427)
T ss_dssp             CS-SEEEEEESSHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CC-CEEEEEECCHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence            34 357777764212237889999999997654321     247999999999999999999999998765

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.95  E-value=6.7e-26  Score=234.42  Aligned_cols=332  Identities=12%  Similarity=-0.015  Sum_probs=234.3

Q ss_pred             CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEE--EeCcHHHHHHHHHh
Q 043610           77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLF--LQGGATTQFAAVPL  152 (430)
Q Consensus        77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~--~~~gaT~a~~~~~~  152 (430)
                      .+..+++.+.+++.+.+.....       ....++...++.+++++.+++++|++  ++ ++++  +++|+|+++..++.
T Consensus        64 ~t~~~~~~v~~~l~~~~~~~~~-------~~~~~p~~~~le~~~~~~la~l~g~~~~~~-~~~~g~~t~ggtea~~~a~~  135 (502)
T 3hbx_A           64 VTTWMEPECDKLIMSSINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNAPLEEA-ETAVGVGTVGSSEAIMLAGL  135 (502)
T ss_dssp             SCCCCCHHHHHHHHHTTTCBTT-------CTTTCHHHHHHHHHHHHHHHHHTTCCCCSS-CCCEEEEESSHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHhccCCC-------ChhcChhHHHHHHHHHHHHHHHhCCCcccc-cCCcceecCcHHHHHHHHHH
Confidence            3466788999999887643111       11335677888889999999999998  43 3222  35789999998877


Q ss_pred             hcCCC--------CC-----cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee
Q 043610          153 NLCTP--------ND-----PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA  216 (430)
Q Consensus       153 sl~~~--------gd-----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~  216 (430)
                      ++..+        |+     +|++....+++  +.+.++..| +++.++..+   .+..+|+++++  +++++++|++++
T Consensus       136 a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s--~~~~~~~~G~~~~~v~~~~---~~~~~d~~~l~~~i~~~t~~v~~~~  210 (502)
T 3hbx_A          136 AFKRKWQNKRKAEGKPVDKPNIVTGANVQVC--WEKFARYFEVELKEVKLSE---GYYVMDPQQAVDMVDENTICVAAIL  210 (502)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCEEEEETTCCHH--HHHHHHHTTCEEEEECCBT---TBCSCCHHHHHHHCCTTEEEEEEEB
T ss_pred             HHHHHHhHHHHhcCCCCCCcEEEEcCCchHH--HHHHHHHcCceeEEEecCC---CcCcCCHHHHHHHHhhCCEEEEEec
Confidence            76433        65     67766556655  334566678 888887643   21357888887  788999999999


Q ss_pred             cCCCccccCC--CCccc-cCC------CcEEEEeccCcCCC-------Cccccc--cccEEEeCCCccc-cCCccEEEEE
Q 043610          217 NETIHGVEFK--EYPSA-KNS------TGILVADMSSNFCS-------KPVDVT--RFGVIYAGAQKNV-GPSGVTIVIV  277 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~-~~~------g~~lvvD~a~s~G~-------~~idl~--~~d~~~~s~~K~~-gp~G~g~l~v  277 (430)
                      ++|+||.+.|  +|.++ +++      |++++||++|+.+.       .+.++.  ..|++.+++|||+ +|.|+|++++
T Consensus       211 ~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~  290 (502)
T 3hbx_A          211 GSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIW  290 (502)
T ss_dssp             SCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEE
T ss_pred             CCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEE
Confidence            9999999999  78886 566      99999999998433       333443  4589999999999 6999999998


Q ss_pred             cH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          278 RK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       278 ~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      ++ +.+.......+.|+...  .......++.+...+.++..+++.+.. .|++++.++..+++++++++|.+..|++++
T Consensus       291 ~~~~~l~~~~~~~~~yl~~~--~~~~~~~~sr~~~~~~a~~~al~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  367 (502)
T 3hbx_A          291 RNKEDLPEELIFHINYLGAD--QPTFTLNFSKGSSQVIAQYYQLIRLGH-EGYRNVMENCRENMIVLREGLEKTERFNIV  367 (502)
T ss_dssp             SSGGGSCGGGCEEECSSSSC--EEECCSCCSCBSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTCEEEC
T ss_pred             eCHHHhhHHhccCcccccCC--CCCccccCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence            74 44322211112222111  111122256665566777777876653 478999999999999999999985568886


Q ss_pred             CCCCCCCccceEEEEcCCC-chhH-HHHHHHHHcCCeecC----CC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          357 PVEKSVRSFMNVPFTLEKS-DLEA-EFVKEAAKEKMVQLK----GH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~~~-~~~~-~~~~~L~~~Gi~~~~----g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      . . .... .+++|.+++. +.+. ++.+.|.++||++..    .. ...+.+||+++.+++++|+++|++.|+++++
T Consensus       368 ~-~-~~~~-~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~  442 (502)
T 3hbx_A          368 S-K-DEGV-PLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMR  442 (502)
T ss_dssp             S-C-SSSS-SEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             e-C-CCCc-eEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            4 2 1133 4688888752 2344 799999999998531    11 1124799999999999999999999998765

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.95  E-value=2.4e-26  Score=227.78  Aligned_cols=320  Identities=11%  Similarity=0.017  Sum_probs=227.1

Q ss_pred             CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCcEEEE
Q 043610           67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEYSVLF  138 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~~vv~  138 (430)
                      ..+++++|+.|.  .+.++.|++++.+.+.+.    .     .++....    .++|+.++++++      ++++ ++++
T Consensus        21 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~----~~lr~~la~~~~~~~~~~~~~~-~i~~   86 (377)
T 3fdb_A           21 YGQGVLPLWVAESDFSTCPAVLQAITDAVQRE----A-----FGYQPDG----SLLSQATAEFYADRYGYQARPE-WIFP   86 (377)
T ss_dssp             SCTTSEECCSSCCCSCCCHHHHHHHHHHHHTT----C-----CSSCCSS----CCHHHHHHHHHHHHHCCCCCGG-GEEE
T ss_pred             cCCCeeeecccCCCCCCCHHHHHHHHHHHHcC----C-----CCCCCCC----HHHHHHHHHHHHHHhCCCCCHH-HEEE
Confidence            456677777654  467899999999887641    1     1111100    244455555554      5554 6776


Q ss_pred             EeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610          139 LQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC  215 (430)
Q Consensus       139 ~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~  215 (430)
                      + +|++++++.++..++++||+|++..+++.+.  ...++..| +++.++...    +  +|+++++  +++++++|+++
T Consensus        87 t-~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~----~--~d~~~l~~~l~~~~~~v~i~  157 (377)
T 3fdb_A           87 I-PDVVRGLYIAIDHFTPAQSKVIVPTPAYPPF--FHLLSATQREGIFIDATG----G--INLHDVEKGFQAGARSILLC  157 (377)
T ss_dssp             E-SCHHHHHHHHHHHHSCTTCCEEEEESCCTHH--HHHHHHHTCCEEEEECTT----S--CCHHHHHHHHHTTCCEEEEE
T ss_pred             e-CChHHHHHHHHHHhcCCCCEEEEcCCCcHhH--HHHHHHcCCEEEEccCCC----C--CCHHHHHHHhccCCCEEEEe
Confidence            5 8899999999999999999999888887764  34566678 888887742    2  7888887  67789999999


Q ss_pred             ecCCCccccCC--CC---ccc-cCCCcEEEEeccCcC----C-CCccccccc-----cEEEeCCCccccCCc--cEEEEE
Q 043610          216 ANETIHGVEFK--EY---PSA-KNSTGILVADMSSNF----C-SKPVDVTRF-----GVIYAGAQKNVGPSG--VTIVIV  277 (430)
Q Consensus       216 ~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~----G-~~~idl~~~-----d~~~~s~~K~~gp~G--~g~l~v  277 (430)
                      +++|+||.++|  ++   .++ +++|+++++|++|+.    | ..+.++..+     ++++.|++|++|++|  +|++++
T Consensus       158 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~  237 (377)
T 3fdb_A          158 NPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIF  237 (377)
T ss_dssp             SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEEC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEe
Confidence            99999999998  44   443 589999999999875    3 233344332     278899999998777  788777


Q ss_pred             -cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCcee
Q 043610          278 -RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYK  355 (430)
Q Consensus       278 -~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~  355 (430)
                       ++++++.+.....            ...++++...++++..+|+...  ..++.+.++++++++++++.|++ ..|+.+
T Consensus       238 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  303 (377)
T 3fdb_A          238 SNPSDAEHWQQLSP------------VIKDGASTLGLIAAEAAYRYGT--DFLNQEVAYLKNNHDFLLHEIPKRIPGAKI  303 (377)
T ss_dssp             CSHHHHHHHHHSCH------------HHHCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred             CCHHHHHHHHHHHH------------hhcCCCCHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence             6777665432110            0124678888888888887532  24688899999999999999987 458877


Q ss_pred             cCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          356 CPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       356 ~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ..  +  .....+.+.++..+.+.++.+.|.++ ||.+.+|..    ..+++|||++.  ++++++++++.|+++++++
T Consensus       304 ~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~--~~e~i~~~l~~l~~~l~~~  376 (377)
T 3fdb_A          304 TP--M--QATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT--SREVLEEAIDRMAKAVSHH  376 (377)
T ss_dssp             CC--C--SBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHTTC
T ss_pred             ec--C--CeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence            53  1  23344456776532334577777554 999877542    24689999984  8999999999999988764

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.95  E-value=1.7e-25  Score=226.35  Aligned_cols=337  Identities=10%  Similarity=0.014  Sum_probs=230.9

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCcEEEEEe
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEYSVLFLQ  140 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~~vv~~~  140 (430)
                      ++++.|+.|-  .++++.|++++.+.+.+...        .++....  -..++|+.++++++      ++++ +|+++ 
T Consensus        44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~--------~~y~~~~--g~~~lr~~la~~~~~~~g~~~~~~-~i~~t-  111 (437)
T 3g0t_A           44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVA--------SIYPNLD--GLPELKQEASRFAKLFVNIDIPAR-ACVPT-  111 (437)
T ss_dssp             CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGG--------GSCCCTT--CCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-
T ss_pred             CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcC--------cCCCCCC--ChHHHHHHHHHHHHHhhCCCCCcc-cEEEe-
Confidence            4566666544  45689999999988763110        1111110  01244555555554      3444 67765 


Q ss_pred             CcHHHHHHHHHhhcC--CCCC--cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEE
Q 043610          141 GGATTQFAAVPLNLC--TPND--PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYL  212 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~--~~gd--~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv  212 (430)
                      +|+|++++.++.+++  ++||  +|++..+++.+.  ...++..| +++.++..+   .+..+|+++++  + ++++++|
T Consensus       112 ~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~~v  186 (437)
T 3g0t_A          112 VGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLN--KLQCRILGQKFESFDLFE---YRGEKLREKLESYLQTGQFCSI  186 (437)
T ss_dssp             SHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHH--HHHHHHHTCCCEEEEGGG---GCTTHHHHHHHHHHTTTCCCEE
T ss_pred             CCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhH--HHHHHHcCCEEEEEeecC---CCCccCHHHHHHHHhcCCceEE
Confidence            899999999999998  9999  999888887664  34566778 888888752   34347888887  6 7889999


Q ss_pred             EEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccc--------cccc-c--cEEEeCCCccccCCc
Q 043610          213 HICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPV--------DVTR-F--GVIYAGAQKNVGPSG  271 (430)
Q Consensus       213 ~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~i--------dl~~-~--d~~~~s~~K~~gp~G  271 (430)
                      ++++++|+||.+++  +   |.++ +++|+++++|++|+.+.    .++        ++.+ .  ++++.|++|++|++|
T Consensus       187 ~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  266 (437)
T 3g0t_A          187 IYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG  266 (437)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG
T ss_pred             EEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc
Confidence            99999999999998  4   4444 58999999999997522    222        3333 2  488999999999778


Q ss_pred             --cEEEEEcHHHHh-ccCCCCCcccc-------ccchhhcCCCCCCccHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHH
Q 043610          272 --VTIVIVRKDLLG-NAQDKTPLMLD-------YKIHDENNSLYNTPPCYCIYMCGLVFEYLLE-LGGLNEVEKMNRKKA  340 (430)
Q Consensus       272 --~g~l~v~~~~~~-~~~~~~p~~~~-------~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~-~~g~~~v~~~~~~l~  340 (430)
                        +|++++++++++ ......+.+..       +.. . .....++++...++++..+|+.... ...++.+.+++++++
T Consensus       267 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  344 (437)
T 3g0t_A          267 QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSS-A-LYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKA  344 (437)
T ss_dssp             GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTT-H-HHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHH
T ss_pred             ceeEEEEECHHHhhhhhhcccccccccchhHHHHHH-H-HhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHH
Confidence              899999999887 51100000000       000 0 0011257788888888888886431 011889999999999


Q ss_pred             HHHHHHHHccCCceecC----CCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCH
Q 043610          341 ELLYNVIDGSNGFYKCP----VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPL  412 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~~~----~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~  412 (430)
                      +++++.|.+ .|+.+..    ..+.. ....+.+.+++ ....++.+.|.++||.+.++...    .+++|||++ +.++
T Consensus       345 ~~l~~~L~~-~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~  420 (437)
T 3g0t_A          345 RIMKKMFLD-NGFNIVYDKDGNEPLA-DGFYFTVGYKG-MDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTS-LLPE  420 (437)
T ss_dssp             HHHHHHHHT-TTEEESSCEETTEECC-SSSEEEEEETT-CCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECS-SSCG
T ss_pred             HHHHHHHHH-cCCEEeccccCCCCCc-eeEEEEEecCC-CCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEe-cCCH
Confidence            999999997 5887751    00111 22345567763 22337999999999998765421    257999998 5599


Q ss_pred             HHHHHHHHHHHHHHHh
Q 043610          413 AGVEKLVAFMKDFQAK  428 (430)
Q Consensus       413 edv~~ll~~L~~~~~~  428 (430)
                      +|+++++++|++++++
T Consensus       421 e~i~~~~~~l~~~~~~  436 (437)
T 3g0t_A          421 SQFPDLEKRLQMLNAE  436 (437)
T ss_dssp             GGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999998764

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.94  E-value=1.7e-25  Score=218.22  Aligned_cols=305  Identities=10%  Similarity=0.076  Sum_probs=219.5

Q ss_pred             CceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           70 RVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      +.+.|+.  .|.++++.|++++.+.+.+.          +++..   ....++|+.+++++|++++ +|+++ +|+++++
T Consensus        17 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~~----------~~y~~---~~~~~lr~~la~~~~~~~~-~i~~t-~G~~~~l   81 (337)
T 3p1t_A           17 QAVCLAFNENPEAVEPRVQAAIAAAAARI----------NRYPF---DAEPRVMRKLAEHFSCPED-NLMLV-RGIDECF   81 (337)
T ss_dssp             CCEECSSCCCCSCCCHHHHHHHHHHGGGT----------TSCCT---THHHHHHHHHHHHHTSCGG-GEEEE-SHHHHHH
T ss_pred             CceEeeCCCCCCCCCHHHHHHHHHhhhhh----------ccCCC---CchHHHHHHHHHHhCcCHH-HEEEe-CCHHHHH
Confidence            3444444  56778999999998876531          12211   2356889999999999875 67765 8899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      +.++..+  +||+|++..+++.+.  ...++..| +++.++...    +..+|+++++-.+++++|++++++|+||.++|
T Consensus        82 ~~~~~~~--~gd~vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~----~~~~d~~~l~~~~~~~~v~i~~p~nptG~~~~  153 (337)
T 3p1t_A           82 DRISAEF--SSMRFVTAWPGFDGY--RARIAVSGLRHFEIGLTD----DLLLDPNDLAQVSRDDCVVLANPSNPTGQALS  153 (337)
T ss_dssp             HHHHHHS--TTSEEEEESSSCSHH--HHHHTTSCCEEEEECBCT----TSSBCHHHHTTCCTTEEEEEESSCTTTCCCCC
T ss_pred             HHHHHhc--CCCeEEEeCCCcHHH--HHHHHHcCCEEEEecCCC----CCCCCHHHHHhhcCCCEEEEeCCCCCCCCCCC
Confidence            9988887  899999887777664  24455667 777776642    22478888872267899999999999999999


Q ss_pred             --CCccc-cCCCcEEEEeccCc-CCCC-c--cccccccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccc
Q 043610          227 --EYPSA-KNSTGILVADMSSN-FCSK-P--VDVTRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKI  297 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s-~G~~-~--idl~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~  297 (430)
                        ++.++ +.+++ +++|++|+ ++.. +  .+..+.++++.|++|++|++|  +|++++++++++.+...         
T Consensus       154 ~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~---------  223 (337)
T 3p1t_A          154 AGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRK---------  223 (337)
T ss_dssp             HHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTT---------
T ss_pred             HHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhh---------
Confidence              67776 56665 66799876 3322 2  223333589999999999777  69999999988765321         


Q ss_pred             hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch
Q 043610          298 HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL  377 (430)
Q Consensus       298 ~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~  377 (430)
                           ...++++...+.++..+|+...   .+++..+++.++++++.+.|.+ .|+.+.+  +  .+ ..+.+..++   
T Consensus       224 -----~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~-~~~~~~~~~---  286 (337)
T 3p1t_A          224 -----QWFCNVGTLDLHALEAALDNDR---AREAHIAKTLAQRRRVADALRG-LGYRVAS--S--EA-NFVLVENAA---  286 (337)
T ss_dssp             -----SCTTCSCHHHHHHHHHHHTCHH---HHHHHHHHHHHHHHHHHHHHHH-TTCCBCC--C--SS-SEEEEECTT---
T ss_pred             -----cCCCCCCHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHH-CcCEECC--C--CC-eEEEEEcCC---
Confidence                 1235677888888877776421   3567777888889999999987 5876643  1  12 345556553   


Q ss_pred             hHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          378 EAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       378 ~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ..++.+.|.++||.+.+|..  ..+++|||++   +++|+++++++|+++.+
T Consensus       287 ~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~~  335 (337)
T 3p1t_A          287 GERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSD  335 (337)
T ss_dssp             THHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence            23677888899999877642  2468999987   79999999999998754

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.94  E-value=8.9e-26  Score=225.19  Aligned_cols=325  Identities=12%  Similarity=0.074  Sum_probs=222.5

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT  144 (430)
                      +.+++|+.|-  .++|+.+++++.+.+.+.    ...|..   .....+..+.+.+.+...+|.  +++ +|+++ +|++
T Consensus        31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~g~~  101 (385)
T 1b5p_A           31 VDLVALTAGEPDFDTPEHVKEAARRALAQG----KTKYAP---PAGIPELREALAEKFRRENGLSVTPE-ETIVT-VGGS  101 (385)
T ss_dssp             CCCEECCCSSCSSCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHTTCCCCCGG-GEEEE-SHHH
T ss_pred             CCEEEecCCCCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCCHHHHHHHHHHHHHHhCCCCChH-HEEEc-CChH
Confidence            3455665543  356789999988877531    111111   111233334444555554564  344 67764 8999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      ++++.++.+++++||+|++..+++.+.  ...++..| +++.++..++  .+..+|+++++  +++++++|++++++|||
T Consensus       102 ~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~p~NPt  177 (385)
T 1b5p_A          102 QALFNLFQAILDPGDEVIVLSPYWVSY--PEMVRFAGGVVVEVETLPE--EGFVPDPERVRRAITPRTKALVVNSPNNPT  177 (385)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTHH--HHHHHHTTCEEEEEECCGG--GTTCCCHHHHHTTCCTTEEEEEEESSCTTT
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCchhH--HHHHHHcCCEEEEeecCcc--cCCCCCHHHHHHhcCCCCEEEEEeCCCCCC
Confidence            999999999999999999988887654  34566678 7778877531  23357888887  67889999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcCCCC---ccccccc----cEEEeCCCccccCCc--cEEEEEcHHHHhccC
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNFCSK---PVDVTRF----GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQ  286 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~idl~~~----d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~  286 (430)
                      |.+++  +   |.++ +++|+++++|++++....   ..++..+    ++++.|++|++|++|  +|++++++++++.+.
T Consensus       178 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~  257 (385)
T 1b5p_A          178 GAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMA  257 (385)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHH
T ss_pred             CCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHH
Confidence            99998  3   4443 588999999999875432   2233333    478899999999889  899999998877643


Q ss_pred             CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY---LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~---l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      +.          ..  ....+++...+.++..+|+.   .. . .++.++++++++++++++.|++. |+++.+  +  .
T Consensus       258 ~~----------~~--~~~~~~~~~~~~a~~~~l~~~~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~  318 (385)
T 1b5p_A          258 SV----------SR--QSTTSPDTIAQWATLEALTNQEASR-A-FVEMAREAYRRRRDLLLEGLTAL-GLKAVR--P--S  318 (385)
T ss_dssp             HH----------HH--TTTCSCCHHHHHHHHHHHHCHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHH-TCCBCC--C--S
T ss_pred             HH----------Hh--hccCCCCHHHHHHHHHHHhCCCcch-H-HHHHHHHHHHHHHHHHHHHHHHC-CCeecC--C--C
Confidence            20          00  11135566777777777763   22 2 36788999999999999999974 776643  1  1


Q ss_pred             ccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          364 SFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ....+.+.++..+.+. ++.+.|.++||.+.+|..  ..+++|||++  +++++++++++.|+++++
T Consensus       319 ~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l~~~l~  383 (385)
T 1b5p_A          319 GAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERFARVLG  383 (385)
T ss_dssp             BTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred             eeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence            2222334554212233 789999889999887642  2468999987  689999999999987654

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.94  E-value=4.4e-27  Score=242.15  Aligned_cols=347  Identities=12%  Similarity=0.061  Sum_probs=235.3

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCC-CcHHHHHHHHHHHHHHHHHhCCCCCc---EEEEEeCcHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSH-RGKEFKSIIEKAESDLRALLNIPQEY---SVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~~~r~~la~l~g~~~~~---~vv~~~~gaT  144 (430)
                      .+.+++.+|..++|+.|++++.+.+.+....|... ...+ ......++.+.+++.+++++|++.+.   +|++ + +|+
T Consensus        44 ~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~-~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~-~-sGs  120 (483)
T 1rv3_A           44 RVGLELIASENFASRAVLEALGSCLNNKYSLGYPG-QRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQP-Y-SGS  120 (483)
T ss_dssp             HSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCC-S-SHH
T ss_pred             hcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCC-ccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEE-C-CcH
Confidence            45788889999999999999998886533222210 0112 13445667778999999999998541   2443 3 456


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHH--HHH----HHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEE
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFK----EAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHI  214 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~----~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i  214 (430)
                      +++.+++.++++|||+|++....+.++.  +..    .++..| .++.++..-+ +.+..+|+++|+  ++ +++|+|++
T Consensus       121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~-~~~~~iD~d~le~~i~~~~tklIi~  199 (483)
T 1rv3_A          121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVN-PDTGYIDYDRLEENARLFHPKLIIA  199 (483)
T ss_dssp             HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBC-TTTCSBCHHHHHHHHHHHCCSEEEE
T ss_pred             HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccc-cCCCcCCHHHHHHHHhhcCCcEEEE
Confidence            8888889999999999998775544321  100    011123 2555554211 122358899987  66 78999999


Q ss_pred             eecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-----cccEEEeCCCccc-cCCccEEEEEcHHHHhcc
Q 043610          215 CANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-----RFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNA  285 (430)
Q Consensus       215 ~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-----~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~  285 (430)
                       +++|++ .+.|  +|.++ +++|+++++|++|+.|....++.     ..|++++|+||++ ||.| |+++++++... +
T Consensus       200 -~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~-~  275 (483)
T 1rv3_A          200 -GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRS-V  275 (483)
T ss_dssp             -CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEEECSBCC--
T ss_pred             -eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCc-eEEEEcchhhh-h
Confidence             888877 8888  78886 68999999999998765543332     3489999999999 7999 99999976431 1


Q ss_pred             CCC--CCccccccchh---hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          286 QDK--TPLMLDYKIHD---ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       286 ~~~--~p~~~~~~~~~---~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      ...  ....+++....   ......||++...+.++..+++.+.+ .+++++.++..++++++.+.|.+ .|++++.. .
T Consensus       276 ~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~  352 (483)
T 1rv3_A          276 DPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMT-PEFKEYQRQVVANCRALSAALVE-LGYKIVTG-G  352 (483)
T ss_dssp             ------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGG-S
T ss_pred             ccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHh-cCCEeccC-C
Confidence            000  00000110000   01123578999999999999987653 36889999999999999999997 59887642 1


Q ss_pred             CCCccceEEEEcCCCchhH-HHHHHHHHcCCeec----CCCC---CCCeeEEeecCCCC----HHHHHHHHHHHHHHHHh
Q 043610          361 SVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL----KGHR---SVGGMRASIYNAMP----LAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~----~g~~---~~g~iRis~~~~~t----~edv~~ll~~L~~~~~~  428 (430)
                      .  ....+.+.+...+.+. ++.+.|.+.||.+.    +|..   ..+++|||+..+++    ++|+++++++|+++++.
T Consensus       353 ~--~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~  430 (483)
T 1rv3_A          353 S--DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL  430 (483)
T ss_dssp             C--SSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             C--CCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence            1  1123444554222333 67788888999987    6642   13579999998777    99999999999998754

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.94  E-value=9.9e-26  Score=224.95  Aligned_cols=325  Identities=12%  Similarity=0.114  Sum_probs=224.5

Q ss_pred             CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhC--CCCCcEEEEEe
Q 043610           67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLN--IPQEYSVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g--~~~~~~vv~~~  140 (430)
                      ..+++++|+.|-  .++++.|++++.+.+.+.    .     ..+..  ...+..+++.+.+.+.+|  ++++ +|+++ 
T Consensus        29 ~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~v~~t-   97 (391)
T 3h14_A           29 AGRRIIHMEVGQPGTGAPRGAVEALAKSLETD----A-----LGYTVALGLPALRQRIARLYGEWYGVDLDPG-RVVIT-   97 (391)
T ss_dssp             TTCCCEECCCSSCSSCSCHHHHHHHHHHHC-------------------CCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-
T ss_pred             cCCCeEEccCCCCCCCCCHHHHHHHHHHHhcC----C-----CCCCCCCChHHHHHHHHHHHHHHhCCCCCHH-HEEEe-
Confidence            445677777654  456889999998877531    0     11111  123334444455555556  4444 67765 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecC
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANE  218 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~  218 (430)
                      +|++++++.++.+++++||+|++..+++.+..  ..++..| +++.++...+  .+..+|+++++ .  ++++|++++++
T Consensus        98 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~--~~~~v~i~~p~  171 (391)
T 3h14_A           98 PGSSGGFLLAFTALFDSGDRVGIGAPGYPSYR--QILRALGLVPVDLPTAPE--NRLQPVPADFAGL--DLAGLMVASPA  171 (391)
T ss_dssp             SSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHHTTCEEEEEECCGG--GTTSCCHHHHTTS--CCSEEEEESSC
T ss_pred             cChHHHHHHHHHHhcCCCCEEEEcCCCCccHH--HHHHHcCCEEEEeecCcc--cCCCCCHHHHHhc--CCeEEEECCCC
Confidence            88999999999999999999998888876643  4566778 8888877542  22346888887 5  89999999999


Q ss_pred             CCccccCC--C---Cccc-cCCCcEEEEeccCcCCC---Cccccccc---cEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          219 TIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---KPVDVTRF---GVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       219 t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~idl~~~---d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      |+||.++|  +   |.++ +++|+++++|++|+...   .+..+.++   .+++.|++|++|++|  +|++++++++++.
T Consensus       172 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~  251 (391)
T 3h14_A          172 NPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRV  251 (391)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHH
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHH
Confidence            99999999  4   4443 58999999999987432   23333332   388899999999777  7999998887765


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +...            .....++++...++++.++|+.   ...++.+.++++++++++.+.|++ .|+.... .+  ..
T Consensus       252 ~~~~------------~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~-~~--~~  312 (391)
T 3h14_A          252 VERI------------AQNMFICAPHASQVAALAALDC---DAELQANLDVYKANRKLMLERLPK-AGFTRIA-PP--DG  312 (391)
T ss_dssp             HHHH------------HHHTTCCCCHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHHH-HTCCCBC-CC--CB
T ss_pred             HHHH------------HhhhccCCCHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHH-cCCCccc-CC--Ce
Confidence            4210            0012247788888888788872   235788999999999999999987 4554321 12  12


Q ss_pred             cceEEEEcCCCchhH-HHHHHHHH-cCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          365 FMNVPFTLEKSDLEA-EFVKEAAK-EKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~-~~~~~L~~-~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ...+.+.++..+.+. ++.+.|.+ +||.+.+|..     ..+++|||++.  +++|++++++.|+++++++
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~~  382 (391)
T 3h14_A          313 AFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLEAFMQAR  382 (391)
T ss_dssp             TTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHHHHHHHC
T ss_pred             eEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence            234555666422233 78888766 4999876532     24579999987  7899999999999998765

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.94  E-value=5.6e-25  Score=217.20  Aligned_cols=315  Identities=13%  Similarity=0.093  Sum_probs=224.7

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.++.|+.|.  .++++.|++++.+.+.+.   +.+   ...+...   ...++|+.+++++|++++ +|+++ +|++++
T Consensus        26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~---~~~---~~~y~~~---~~~~lr~~la~~~g~~~~-~i~~t-~g~~~a   94 (360)
T 3hdo_A           26 ASWIKLNTNENPYPPSPEVVKAILEELGPD---GAA---LRIYPSA---SSQKLREVAGELYGFDPS-WIIMA-NGSDEV   94 (360)
T ss_dssp             TTSEECSSCCCSSCCCHHHHHHHHHHHTTT---CGG---GGSCCCS---SCHHHHHHHHHHHTCCGG-GEEEE-SSHHHH
T ss_pred             cceeeccCCCCCCCCCHHHHHHHHHHHhcc---cch---hhcCCCC---chHHHHHHHHHHhCcCcc-eEEEc-CCHHHH
Confidence            4566666654  567899999999887541   000   1111111   124788999999998765 77775 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccC
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEF  225 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~  225 (430)
                      ++.++.+++++||+|++..+++.+.  ...++..| +++.++..+  ++  .+  +++.-..++++|++++++|+||.++
T Consensus        95 l~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~--~~--~~--~~l~~~~~~~~v~i~~p~nptG~~~  166 (360)
T 3hdo_A           95 LNNLIRAFAAEGEEIGYVHPSYSYY--GTLAEVQGARVRTFGLTG--DF--RI--AGFPERYEGKVFFLTTPNAPLGPSF  166 (360)
T ss_dssp             HHHHHHHHCCTTCEEEEESSSCTHH--HHHHHHHTCEEEEECBCT--TS--SB--TTCCSSBCSSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHhCCCCEEEEcCCChHHH--HHHHHHCCCEEEEeeCCC--CC--CH--HHHHhhcCCCEEEEeCCCCCCCCCc
Confidence            9999999999999999887776654  34566678 777777643  12  12  4454122467999999999999999


Q ss_pred             C--CCccc-cCCCcEEEEeccCcC--CCCcccc-ccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccc
Q 043610          226 K--EYPSA-KNSTGILVADMSSNF--CSKPVDV-TRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDY  295 (430)
Q Consensus       226 p--ei~~~-~~~g~~lvvD~a~s~--G~~~idl-~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~  295 (430)
                      |  ++.++ +++|+++++|++|+.  +.....+ +..  .+++.|++|++|++|  +|++++++++++.+...       
T Consensus       167 ~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-------  239 (360)
T 3hdo_A          167 PLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKI-------  239 (360)
T ss_dssp             CHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHH-------
T ss_pred             CHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHh-------
Confidence            9  77776 678999999999873  2112222 122  378899999998767  79999998887764220       


Q ss_pred             cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC
Q 043610          296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS  375 (430)
Q Consensus       296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~  375 (430)
                             ...+++|...+.++..+|+..   ..++++.++++++++++++.|.+ .|+.+.+  +  .+ ..+.+.+++.
T Consensus       240 -------~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~--~~-~~~~~~~~~~  303 (360)
T 3hdo_A          240 -------RDHYNLDRLAQAACVAALRDQ---AYLSECCRRIRETREWFTTELRS-IGYDVIP--S--QG-NYLFATPPDR  303 (360)
T ss_dssp             -------SCSCCSCHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHHHHHHHHH-TTCEECC--C--SS-SEEEEECTTC
T ss_pred             -------CCCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHH-CCCEEcC--C--Cc-cEEEEECCCC
Confidence                   012467888888888888752   24788999999999999999997 4887653  1  23 3455666642


Q ss_pred             chhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          376 DLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       376 ~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       ...++.+.|.++||.+.++..  ..+++|||++   +++|+++++++|+++.+.|
T Consensus       304 -~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~~~  355 (360)
T 3hdo_A          304 -DGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGEGH  355 (360)
T ss_dssp             -CHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC--
T ss_pred             -CHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhccc
Confidence             233788999999999876542  2467999987   8999999999999987755

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.94  E-value=1e-25  Score=225.46  Aligned_cols=321  Identities=15%  Similarity=0.115  Sum_probs=226.6

Q ss_pred             CCCceeecCC-CCC--CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           68 EDRVFNFAAG-PAN--LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        68 ~~~~~l~~~g-p~~--~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      .+.+++|+.| |.+  .++.+++++.+.+.++. .+.+   .+.+........+++++.+++++|++   +.+++ ++||
T Consensus        44 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~-~~~~---~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sGs  115 (401)
T 1fc4_A           44 GSHVINFCANNYLGLANHPDLIAAAKAGMDSHG-FGMA---SVRFICGTQDSHKELEQKLAAFLGME---DAILY-SSCF  115 (401)
T ss_dssp             SCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHC-SCCC---SCHHHHCCBHHHHHHHHHHHHHHTCS---EEEEE-SCHH
T ss_pred             CccEEEeeccCcccccCCHHHHHHHHHHHHHhC-CCCC---CCCcccCCcHHHHHHHHHHHHHhCCC---cEEEe-CChH
Confidence            3456666665 332  38899999998876532 1111   00000001245678999999999987   34555 4678


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEe
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHIC  215 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~  215 (430)
                      +++..++..++++||.|++....+.+.  ...++..| +++.++.         .|+++++  +++      ++++|+++
T Consensus       116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~--~~~~~~~g~~~~~~~~---------~d~~~l~~~l~~~~~~~~~~~~v~~~  184 (401)
T 1fc4_A          116 DANGGLFETLLGAEDAIISDALNHASI--IDGVRLCKAKRYRYAN---------NDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             HHHHTTHHHHCCTTCEEEEETTCCHHH--HHHHHTSCSEEEEECT---------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             HHHHHHHHHHcCCCCEEEEcchhHHHH--HHHHHHcCCceEEECC---------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence            899998888889999888665544332  23455556 5544431         3556665  332      78999999


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-c--------cccc-cccEEEeCCCccc-cCCccEEEEEcHHH
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-P--------VDVT-RFGVIYAGAQKNV-GPSGVTIVIVRKDL  281 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-~--------idl~-~~d~~~~s~~K~~-gp~G~g~l~v~~~~  281 (430)
                      +++|+||.+.|  +|.++ +++|+++++|++|+.|.. +        +++. +.|+++.|+||++ |+.| |++++++++
T Consensus       185 ~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~~~~  263 (401)
T 1fc4_A          185 GVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GYTAARKEV  263 (401)
T ss_dssp             SEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEECHHH
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-EEEEcCHHH
Confidence            99999999999  78776 688999999999976553 2        3443 3479999999999 7778 999999998


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+......   +       ...++++...++++..+|+.+.+   .+.+.++++++++++++.|++ .|+++.+    
T Consensus       264 ~~~l~~~~~~---~-------~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~-~g~~~~~----  325 (401)
T 1fc4_A          264 VEWLRQRSRP---Y-------LFSNSLAPAIVAASIKVLEMVEA---GSELRDRLWANARQFREQMSA-AGFTLAG----  325 (401)
T ss_dssp             HHHHHHHCHH---H-------HHSCCCCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHH-TTCCBCC----
T ss_pred             HHHHHHhCcC---c-------eeCCCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH-cCCcccC----
Confidence            7764321100   0       01247788888989999987642   478899999999999999997 5776642    


Q ss_pred             CCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC-----CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          362 VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS-----VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~-----~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+ ..+.+.+++ ..+. ++.+.|.++||.+.++...     .+.+||+++.+++++|+++++++|++++++
T Consensus       326 ~~~-~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  396 (401)
T 1fc4_A          326 ADH-AIIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ  396 (401)
T ss_dssp             SSS-SEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCC-CEEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence            123 456677764 2233 6889999999997664321     246999999999999999999999998765

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.94  E-value=2.9e-26  Score=228.04  Aligned_cols=317  Identities=13%  Similarity=0.099  Sum_probs=229.2

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+++|+.|-  .+.++.+++++.+.+.+  ..        +++..  ....++|+.++++++++++ +++++ +|+++++
T Consensus        26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~--------~y~~~--~~~~~l~~~la~~~~~~~~-~v~~~-~g~~~a~   91 (381)
T 1v2d_A           26 GAVNLGQGFPSNPPPPFLLEAVRRALGR--QD--------QYAPP--AGLPALREALAEEFAVEPE-SVVVT-SGATEAL   91 (381)
T ss_dssp             TCEECCCCSCSSCCCHHHHHHHHHHTTT--SC--------SCCCT--TCCHHHHHHHHHHHTSCGG-GEEEE-SSHHHHH
T ss_pred             CeEEecCCCCCCCCCHHHHHHHHHHHHH--hc--------CCCCC--CCCHHHHHHHHHhcCCChh-hEEEc-CChHHHH
Confidence            345665543  34678999999988753  11        11111  1234788999999999875 67665 8899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecC--CCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSG--KAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~--~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      +.++.+++++||+|++..+++.+..  ..++..| +++.++..  ++ ++  .+|+++++  +++++++|++++++|+||
T Consensus        92 ~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~-~~--~~d~~~l~~~l~~~~~~v~~~~~~nptG  166 (381)
T 1v2d_A           92 YVLLQSLVGPGDEVVVLEPFFDVYL--PDAFLAGAKARLVRLDLTPE-GF--RLDLSALEKALTPRTRALLLNTPMNPTG  166 (381)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEEETT-EE--ECCHHHHHTTCCTTEEEEEEESSCTTTC
T ss_pred             HHHHHHhCCCCCEEEEcCCCchhHH--HHHHHcCCEEEEEeCCCCCc-cC--CcCHHHHHHhcCcCCEEEEECCCCCCCC
Confidence            9999999899999999888877643  3456677 77777764  11 12  46888887  678899999999999999


Q ss_pred             ccCC--C---Cccc-cCCCcEEEEeccCcCC---CCccccc----cccEEEeCCCccccCCc--cEEEEEcHHHHhccCC
Q 043610          223 VEFK--E---YPSA-KNSTGILVADMSSNFC---SKPVDVT----RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQD  287 (430)
Q Consensus       223 ~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~~idl~----~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~  287 (430)
                      .++|  +   |.++ +++|+++++|++|+.+   ..+.++.    +.|+++.|+||++|++|  +|++++++++++.+..
T Consensus       167 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  246 (381)
T 1v2d_A          167 LVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAG  246 (381)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHH
T ss_pred             CccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHH
Confidence            9998  3   4444 5899999999998753   3333333    34689999999999888  8999999887765421


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                             ..   .  ...++++...++++..+|+......+++.+.++++++++++.+.|++ .|+++..  +  .....
T Consensus       247 -------~~---~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~~~~  309 (381)
T 1v2d_A          247 -------MR---Q--WTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA-MGLRVYV--P--EGTYF  309 (381)
T ss_dssp             -------HH---H--HHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-TTCCEEC--C--SBSSE
T ss_pred             -------HH---h--hcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH-CCCEecC--C--CcceE
Confidence                   00   0  01246677888888888886532346789999999999999999997 6887653  2  12234


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.+++.  +  +.+.|.++||.+.+|..      ..+++|||++.  +++|++++++.|+++++.
T Consensus       310 ~~~~~~~~--~--~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~  370 (381)
T 1v2d_A          310 LMAELPGW--D--AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHLALERLGRVVNS  370 (381)
T ss_dssp             EEEECTTC--C--HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC--
T ss_pred             EEEecChH--h--HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence            55677642  2  66677889999876531      24589999986  899999999999987653

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.94  E-value=2.2e-25  Score=220.57  Aligned_cols=317  Identities=12%  Similarity=0.001  Sum_probs=214.5

Q ss_pred             CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc---
Q 043610           78 PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL---  154 (430)
Q Consensus        78 p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl---  154 (430)
                      .+++++.|++++.+.+.+.+         ...+    ...+++++.+++++|.+   +++++ +|+|+|++.++.++   
T Consensus         8 ~~~~~~~v~~a~~~~~~~~~---------~~~~----~~~~~l~~~la~~~~~~---~v~~~-~ggt~al~~~~~~~~~~   70 (375)
T 2fnu_A            8 EPCLDKEDKKAVLEVLNSKQ---------LTQG----KRSLLFEEALCEFLGVK---HALVF-NSATSALLTLYRNFSEF   70 (375)
T ss_dssp             CCCCCHHHHHHHHHHHTSSC---------CSSS----HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHSSCC
T ss_pred             CCCCCHHHHHHHHHHHHcCc---------ccCC----hHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHhccc
Confidence            45689999999998875311         0112    24668999999999986   67765 78999999999999   


Q ss_pred             CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCc
Q 043610          155 CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYP  229 (430)
Q Consensus       155 ~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~  229 (430)
                      +++||+|++....+.+..  ..++..| +++.++..+   .+ .+|+++++  +++++++|+++|+   ||.+.|  +|.
T Consensus        71 ~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~---~~-~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~  141 (375)
T 2fnu_A           71 SADRNEIITTPISFVATA--NMLLESGYTPVFAGIKN---DG-NIDELALEKLINERTKAIVSVDY---AGKSVEVESVQ  141 (375)
T ss_dssp             CTTSCEEEECSSSCTHHH--HHHHHTTCEEEECCBCT---TS-SBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHH
T ss_pred             CCCCCEEEECCCccHhHH--HHHHHCCCEEEEeccCC---CC-CCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHH
Confidence            889999998777776653  2345567 777776643   23 57888887  6788999888876   899999  788


Q ss_pred             cc-cCCCcEEEEeccCcCCCCccc--cccc-cEE--EeCCCccccCCccEEEEEc--HHHHhccCCCCCccc----cccc
Q 043610          230 SA-KNSTGILVADMSSNFCSKPVD--VTRF-GVI--YAGAQKNVGPSGVTIVIVR--KDLLGNAQDKTPLML----DYKI  297 (430)
Q Consensus       230 ~~-~~~g~~lvvD~a~s~G~~~id--l~~~-d~~--~~s~~K~~gp~G~g~l~v~--~~~~~~~~~~~p~~~----~~~~  297 (430)
                      ++ +++|+++++|++|++|..+.+  +..+ |+.  .+++||++|+ |+|+++++  +++++.+.+......    .+..
T Consensus       142 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (375)
T 2fnu_A          142 KLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEG  220 (375)
T ss_dssp             HHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEEESSSSCE
T ss_pred             HHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCccc-cCceEEEeCCHHHHHHHHHHHhcCCcccccccc
Confidence            86 688999999999999876533  3333 444  5556699998 99999985  566655432110000    0000


Q ss_pred             h-hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC-CCCCccceEEEEcCCC
Q 043610          298 H-DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE-KSVRSFMNVPFTLEKS  375 (430)
Q Consensus       298 ~-~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~-~~~rs~~iv~f~~~~~  375 (430)
                      . ...+...+..+...    ..++  .. ..+++++.++.+++++++++.|.+..|+++.... ....+..++.+.++..
T Consensus       221 ~~~~~~~~~~~~~~~~----a~~~--~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (375)
T 2fnu_A          221 EVKSIGHNFRLNEIQS----ALGL--SQ-LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK  293 (375)
T ss_dssp             EESSCCCBCCCCHHHH----HHHH--HH-HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGG
T ss_pred             ccccccccCCCCHHHH----HHHH--HH-HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcc
Confidence            0 00011111112111    1122  11 2378899999999999999999975588775421 1122334445666532


Q ss_pred             ch-hH-HHHHHHHHcCCeecCCCCC-----------------------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          376 DL-EA-EFVKEAAKEKMVQLKGHRS-----------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       376 ~~-~~-~~~~~L~~~Gi~~~~g~~~-----------------------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +. +. ++.+.|.++||.+..+...                       .+.+||+++.+++++|+++++++|++++++
T Consensus       294 ~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~  371 (375)
T 2fnu_A          294 FFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFES  371 (375)
T ss_dssp             GGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence            22 33 7999999999987622110                       146999999999999999999999998765

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.94  E-value=2.8e-25  Score=224.94  Aligned_cols=326  Identities=12%  Similarity=0.087  Sum_probs=229.9

Q ss_pred             CCCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-----CCCCcEE
Q 043610           68 EDRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-----IPQEYSV  136 (430)
Q Consensus        68 ~~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-----~~~~~~v  136 (430)
                      .+.+++|+.|-      .++++.|++++.+.+.+....+.        .+.  ....++|+.++++++     ++++ +|
T Consensus        53 ~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y--------~~~--~g~~~lr~~la~~~~~~~~~~~~~-~v  121 (427)
T 3dyd_A           53 NKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGY--------APS--IGFLSSREEIASYYHCPEAPLEAK-DV  121 (427)
T ss_dssp             TSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSC--------CCT--TCCHHHHHHHHHHHCBTTBCCCGG-GE
T ss_pred             CCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCC--------CCC--CCcHHHHHHHHHHHhhcCCCCChH-HE
Confidence            34567776543      37899999999988764211111        110  113477889999998     5554 67


Q ss_pred             EEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEE
Q 043610          137 LFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLH  213 (430)
Q Consensus       137 v~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~  213 (430)
                      +++ +|+|+|++.++..+.++||+|++..+++.++.  ..++..| +++.++...+  .+..+|+++++  +++++++|+
T Consensus       122 ~~t-~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~v~  196 (427)
T 3dyd_A          122 ILT-SGCSQAIDLCLAVLANPGQNILVPRPGFSLYK--TLAESMGIEVKLYNLLPE--KSWEIDLKQLEYLIDEKTACLI  196 (427)
T ss_dssp             EEE-SSHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHTTCEEEEEEEEGG--GTTEECHHHHHSSCCTTEEEEE
T ss_pred             EEe-cCcHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHcCCEEEEEecccc--cCCCCCHHHHHHHhccCCCEEE
Confidence            765 78999999999999999999998888876643  4566678 7777776432  22246888887  678899999


Q ss_pred             EeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC----CCccccccc--c---EEEeCCCccccCCc--cEEEE
Q 043610          214 ICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC----SKPVDVTRF--G---VIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       214 i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G----~~~idl~~~--d---~~~~s~~K~~gp~G--~g~l~  276 (430)
                      +++++|+||.++|  +   |.++ +++|+++++|++|+..    .....+..+  +   +++.|++|.+|++|  +|+++
T Consensus       197 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~  276 (427)
T 3dyd_A          197 VNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWIL  276 (427)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEE
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEE
Confidence            9999999999999  3   4444 5899999999998752    222333333  2   66789999998778  89999


Q ss_pred             EcH-------HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          277 VRK-------DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       277 v~~-------~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      +++       ++++.+..       +   ..   ..++++...++++..+|+... ...++++.++++++++++++.|++
T Consensus       277 ~~~~~~~~~~~i~~~l~~-------~---~~---~~~~~~~~~~~a~~~~L~~~~-~~~~~~~~~~~~~~~~~l~~~L~~  342 (427)
T 3dyd_A          277 IHDRRDIFGNEIRDGLVK-------L---SQ---RILGPCTIVQGALKSILCRTP-GEFYHNTLSFLKSNADLCYGALAA  342 (427)
T ss_dssp             EECSTTSSHHHHHHHHHH-------H---HH---HHCCSCHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCcchhhHHHHHHHHHH-------H---Hh---ccCCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            874       44433211       0   00   124778888888888887422 235788899999999999999997


Q ss_pred             cCCceecCCCCCCCccceEEEEcCC-----CchhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHH
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEK-----SDLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~-----~~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~  421 (430)
                      .+|+.+..  +  ...+.+.+.++.     .....+++++| +++||.+.+|..  ..+++||++.  +++++++++++.
T Consensus       343 ~~g~~~~~--p--~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~  416 (427)
T 3dyd_A          343 IPGLRPVR--P--SGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT--VPEVMMLEACSR  416 (427)
T ss_dssp             STTEEEEC--C--SBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC--SCHHHHHHHHHH
T ss_pred             CCCceecC--C--CeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC--CCHHHHHHHHHH
Confidence            55887642  1  122334445541     11233788887 578999887642  3468999986  689999999999


Q ss_pred             HHHHHHhh
Q 043610          422 MKDFQAKH  429 (430)
Q Consensus       422 L~~~~~~~  429 (430)
                      |+++++++
T Consensus       417 l~~~l~~~  424 (427)
T 3dyd_A          417 IQEFCEQH  424 (427)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998875

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.94  E-value=2e-25  Score=222.01  Aligned_cols=319  Identities=11%  Similarity=0.062  Sum_probs=222.0

Q ss_pred             CCCceeecCCC--C-CCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGP--A-NLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp--~-~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      .+.+++|+.|-  . +.++.+++++.+.+.++. +.+.+.+   ..  ......+++++.+++++|.+   +.+++ ++|
T Consensus        38 g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~---~~--g~~~~~~~l~~~la~~~g~~---~~i~~-~sG  108 (384)
T 1bs0_A           38 DRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGH---VS--GYSVVHQALEEELAEWLGYS---RALLF-ISG  108 (384)
T ss_dssp             TEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTT---TT--CCCHHHHHHHHHHHHHHTCS---EEEEE-SCH
T ss_pred             CceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCc---cc--CChHHHHHHHHHHHHHhCCC---cEEEe-CCc
Confidence            34466777754  2 478899999999886532 1111111   01  11245678999999999985   45665 456


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeec
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICAN  217 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~  217 (430)
                      |+++..++..+.++||.|++..+. |+. ....++..| +++.++.         .|+++++  +++   ++++|+++++
T Consensus       109 t~a~~~~~~~~~~~gd~v~~~~~~-~~~-~~~~~~~~g~~~~~~~~---------~d~~~l~~~l~~~~~~~~~v~~~~~  177 (384)
T 1bs0_A          109 FAANQAVIAAMMAKEDRIAADRLS-HAS-LLEAASLSPSQLRRFAH---------NDVTHLARLLASPCPGQQMVVTEGV  177 (384)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEETTC-CHH-HHHHHHTSSSEEEEECT---------TCHHHHHHHHHSCCSSCEEEEEESB
T ss_pred             HHHHHHHHHHhCCCCcEEEEcccc-cHH-HHHHHHHcCCCEEEeCC---------CCHHHHHHHHHhcCCCCeEEEEeCC
Confidence            999999999888999988755444 432 223344556 5555542         3556665  332   4789999999


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc-----c-c-c-ccccEEEeCCCccccCCccEEEEEcHHHHhccC
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP-----V-D-V-TRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQ  286 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~-----i-d-l-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~  286 (430)
                      +|+||.+.|  +|.++ +++|+++++|++|+.|...     + + + ...|+++.|+||++||+| |++++++++++.+.
T Consensus       178 ~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~l~  256 (384)
T 1bs0_A          178 FSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG-AAVLCSSTVADYLL  256 (384)
T ss_dssp             CTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC-EEEEECHHHHHHHH
T ss_pred             CCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC-cEEEeCHHHHHHHH
Confidence            999999999  78776 6899999999999877531     1 1 1 123799999999999999 99999998877643


Q ss_pred             CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                      ....   .|       ...++++...+.++..+++.+.+ ++.+.+.++++++++++++.|++ .|+++.+    ..+ .
T Consensus       257 ~~~~---~~-------~~~~~~~~~~~~~~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~----~~~-~  319 (384)
T 1bs0_A          257 QFAR---HL-------IYSTSMPPAQAQALRASLAVIRS-DEGDARREKLAALITRFRAGVQD-LPFTLAD----SCS-A  319 (384)
T ss_dssp             HHCH---HH-------HSSBCCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHTT-SSCEECS----CCS-S
T ss_pred             Hhch---hh-------hcCCCCCHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHh-cCCcccC----CCC-C
Confidence            2110   01       01125777888888888987652 13578899999999999999987 5877652    123 2


Q ss_pred             eEEEEcCCCchhH-HHHHHHHHcCCeecCCCC-----CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          367 NVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR-----SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       367 iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~-----~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .+.+.+++ +.+. ++.+.|.++||.+.++..     ..+.+||+++.+++++|+++++++|+++
T Consensus       320 ~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          320 IQPLIVGD-NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             BCCEEEES-HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEEeCC-HHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            34466653 2233 788999889999876432     1257999999999999999999999875

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.94  E-value=1.3e-25  Score=223.79  Aligned_cols=328  Identities=13%  Similarity=0.115  Sum_probs=223.1

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ga  143 (430)
                      .+.+++|+.|-  .+.++.+++++.+.+.+    +...|..   .....+..+.+.+.+.+.+|.  +++ +|+++ +|+
T Consensus        29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~~~~y~~---~~g~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~   99 (388)
T 1j32_A           29 GIDVCSFSAGEPDFNTPKHIVEAAKAALEQ----GKTRYGP---AAGEPRLREAIAQKLQRDNGLCYGAD-NILVT-NGG   99 (388)
T ss_dssp             TCCCEECCCSSCSSCCCHHHHHHHHHHHHT----TCCSCCC---TTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SHH
T ss_pred             CCCEEECCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCC---CCCCHHHHHHHHHHHHHhcCCCCChh-hEEEc-CCH
Confidence            34556665553  34678999999887753    1111111   111334445566666666675  343 67765 889


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      +++++.++.+++++||+|++..+++.+..  ..++..| +++.++...+  .+..+|+++++  +++++++|++++++|+
T Consensus       100 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~p~np  175 (388)
T 1j32_A          100 KQSIFNLMLAMIEPGDEVIIPAPFWVSYP--EMVKLAEGTPVILPTTVE--TQFKVSPEQIRQAITPKTKLLVFNTPSNP  175 (388)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEESSCCTHHH--HHHHHTTCEEEEECCCGG--GTTCCCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCChhHH--HHHHHcCCEEEEecCCcc--cCCCCCHHHHHHhcCcCceEEEEeCCCCC
Confidence            99999999999999999998887776643  4456677 7777776431  12347888887  7788999999999999


Q ss_pred             ccccCC-----CCccc-cCCCcEEEEeccCcCCCC----c---ccc----ccccEEEeCCCccccCCc--cEEEEEcHHH
Q 043610          221 HGVEFK-----EYPSA-KNSTGILVADMSSNFCSK----P---VDV----TRFGVIYAGAQKNVGPSG--VTIVIVRKDL  281 (430)
Q Consensus       221 tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~---idl----~~~d~~~~s~~K~~gp~G--~g~l~v~~~~  281 (430)
                      ||.++|     +|.++ +++|+++++|++|+.+..    .   ..+    ...++++.|+||++|++|  +|++++++++
T Consensus       176 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~  255 (388)
T 1j32_A          176 TGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPL  255 (388)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHH
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHH
Confidence            999987     34454 588999999999875432    1   122    223689999999999889  9999999988


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+...           ..... .+++...++++..+|+..  ...++.+.++++++++++.+.|++..|+++..  + 
T Consensus       256 ~~~l~~~-----------~~~~~-~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~-  318 (388)
T 1j32_A          256 VKAATKI-----------QGHST-SNVCTFAQYGAIAAYENS--QDCVQEMLAAFAERRRYMLDALNAMPGLECPK--P-  318 (388)
T ss_dssp             HHHHHHH-----------HHTTT-CSCCHHHHHHHHHHHHSC--SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCC--C-
T ss_pred             HHHHHHH-----------Hhhcc-cCCCHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC--C-
Confidence            7754220           00111 234555666666666532  12467888999999999999999744776643  1 


Q ss_pred             CCccceEEEEcCCCchh-HHHHHHHHH-cCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          362 VRSFMNVPFTLEKSDLE-AEFVKEAAK-EKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~-~~~~~~L~~-~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       .....+.+.++..+.+ .++.+.|.+ +||.+.+|..  ..+++|||++  +++++++++++.|++++++
T Consensus       319 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~  386 (388)
T 1j32_A          319 -DGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHG  386 (388)
T ss_dssp             -CBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             -CeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence             1223333444420122 378888875 7999877532  2468999997  5899999999999998765

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.94  E-value=3.4e-26  Score=229.11  Aligned_cols=331  Identities=12%  Similarity=0.093  Sum_probs=227.5

Q ss_pred             CceeecCC---CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHH
Q 043610           70 RVFNFAAG---PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGAT  144 (430)
Q Consensus        70 ~~~l~~~g---p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT  144 (430)
                      .+++|+.|   |.+.++.|++++.+.+.+....+   |..   .....+..+++++.+++++|.+  ++.+++++ +|++
T Consensus        40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~---y~~---~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~-~g~~  112 (407)
T 3nra_A           40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQA---YTE---YRGDLGIRDLLAPRLAAFTGAPVDARDGLIIT-PGTQ  112 (407)
T ss_dssp             CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHH---SCC---TTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEE-SHHH
T ss_pred             ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCC---cCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCcH
Confidence            36777653   34688899999998876421101   101   1223456678889999999984  21267775 8999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC--CcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA--EKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~--~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      ++++.++.+++++||+|++..+.+.+.  ...++..| +++.++....  .+.+..+|+++++  +.+++++|++++++|
T Consensus       113 ~a~~~~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~n  190 (407)
T 3nra_A          113 GALFLAVAATVARGDKVAIVQPDYFAN--RKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNN  190 (407)
T ss_dssp             HHHHHHHHTTCCTTCEEEEEESCCTHH--HHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCT
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCcccch--HHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCC
Confidence            999999999999999999888877764  34566677 7777776310  0012347888887  667899999999999


Q ss_pred             CccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccccccc-----c--cEEEeCCCccccCCc--cEEEEEcHH
Q 043610          220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTR-----F--GVIYAGAQKNVGPSG--VTIVIVRKD  280 (430)
Q Consensus       220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~-----~--d~~~~s~~K~~gp~G--~g~l~v~~~  280 (430)
                      +||.++|  +   |.++ +++|+++++|++|+.+.    ....+..     .  ++++.|++|++|++|  +|+++.+++
T Consensus       191 ptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~  270 (407)
T 3nra_A          191 PAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRA  270 (407)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHH
T ss_pred             CCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHH
Confidence            9999999  3   4444 58899999999998632    2222221     2  388999999999777  799999998


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +++.+....          .  ....+++...++++..+|+..  ...+++..++++++++++++.|++..|+.+..  +
T Consensus       271 ~~~~l~~~~----------~--~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~  334 (407)
T 3nra_A          271 IIARMEKLQ----------A--IVSLRAAGYSQAVLRGWFDEA--PGWMEDRIARHQAIRDELLHVLRGCEGVFART--P  334 (407)
T ss_dssp             HHHHHHHHH----------H--HHTSSSCHHHHGGGGGTTCCC--TTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCC--C
T ss_pred             HHHHHHHHH----------h--hhccCCChHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhcCCCceecc--C
Confidence            877643200          0  011244556666666565421  12467888999999999999999755776642  1


Q ss_pred             CCCccceEEEEcCCCchhH-HHHHHHHH-cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          361 SVRSFMNVPFTLEKSDLEA-EFVKEAAK-EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~~-~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                        .....+.+.++..+.+. ++.+.|.+ +||.+.+|..    ..+++|||++.  ++++|+++++.|++++++.
T Consensus       335 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~~~~~  405 (407)
T 3nra_A          335 --QAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ--DHEAAVAAARRIVTLVERY  405 (407)
T ss_dssp             --SBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred             --CeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence              12223445555422333 78888865 6999876532    24579999985  8999999999999988753

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.94  E-value=6.3e-26  Score=222.73  Aligned_cols=317  Identities=17%  Similarity=0.114  Sum_probs=218.7

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      .+++.+.+++++++.|++++.+.+..+.        .+   ....+..+++++.+++++|.+++ +++++ +|+|++++.
T Consensus        15 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--------~~---~g~~~~~~~~~~~l~~~~g~~~~-~v~~~-~g~t~a~~~   81 (359)
T 1svv_A           15 PYSFVNDYSVGMHPKILDLMARDNMTQH--------AG---YGQDSHCAKAARLIGELLERPDA-DVHFI-SGGTQTNLI   81 (359)
T ss_dssp             CEECSCSCSSCCCHHHHHHHHHHTTCCC--------CS---TTCSHHHHHHHHHHHHHHTCTTS-EEEEE-SCHHHHHHH
T ss_pred             eEEecCCCcCCCCHHHHHHHHHHHhhcc--------cc---ccccHHHHHHHHHHHHHhCCCCc-cEEEe-CCchHHHHH
Confidence            5666666667889999999998875311        11   11235567899999999998775 77765 789999999


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCC-------ccEEEEeecCC
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPD-------AKYLHICANET  219 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~-------~~lv~i~~~~t  219 (430)
                      ++..+.++||+|++..+++.+......++..| +++.++..   ++  .+|+++++  ++++       +++|+++++ |
T Consensus        82 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~--~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~  155 (359)
T 1svv_A           82 ACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DG--KLRVADIESALHENRSEHMVIPKLVYISNT-T  155 (359)
T ss_dssp             HHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TS--CCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred             HHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CC--eecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence            99999889999998877776653211245667 87777763   12  47888887  5443       899999998 7


Q ss_pred             CccccCC--C---Cccc-cCCCcEEEEeccC---cCCCCccccc------cccEEEeCCCccccCCccEEEEEcHHHHhc
Q 043610          220 IHGVEFK--E---YPSA-KNSTGILVADMSS---NFCSKPVDVT------RFGVIYAGAQKNVGPSGVTIVIVRKDLLGN  284 (430)
Q Consensus       220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~---s~G~~~idl~------~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~  284 (430)
                      +||.++|  +   |.++ +++|+++++|++|   ++|..+.+..      ..|+++.++||+.+|.|+|++++++++++.
T Consensus       156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~  235 (359)
T 1svv_A          156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPN  235 (359)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTT
T ss_pred             CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHH
Confidence            8999998  3   4444 5889999999998   6676655443      237899999999779999999999888665


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +.+    ...     ..+... +.+.....++..+   +. ..+++++.++++++++++++.|+ ..|+++..  + ..+
T Consensus       236 ~~~----~~~-----~~~~~~-~~~~~~~~~~~~~---l~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~--~-~~~  297 (359)
T 1svv_A          236 ARH----LIK-----QRGALM-AKGWLLGIQFEVL---MK-DNLFFELGAHSNKMAAILKAGLE-ACGIRLAW--P-SAS  297 (359)
T ss_dssp             HHH----HHH-----HTTCCC-TTTHHHHHHHHHH---TS-TTHHHHHHHHHHHHHHHHHHHHH-HTTCCBSS--C-CSS
T ss_pred             HHH----HHh-----cCCccc-ccchhhHHHHHHH---Hh-hhhHHHHHHHHHHHHHHHHHHhc-cCCeEEcc--C-Ccc
Confidence            321    000     011111 1122222222222   22 34578899999999999999994 57887653  1 122


Q ss_pred             cceEEEEcCCCchhHHHHHHHHHc-CCeecCCC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          365 FMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       ..+.+.++     .++.++|.++ ||.+.... ...+++||+++.+++++|+++++++|++++++.
T Consensus       298 -~~~~~~~~-----~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  358 (359)
T 1svv_A          298 -NQLFPILE-----NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST  358 (359)
T ss_dssp             -SEECBEEE-----HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred             -ceEEEEcC-----HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence             23334433     3688889888 99984311 123479999988899999999999999987653

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.94  E-value=5.2e-25  Score=223.73  Aligned_cols=299  Identities=11%  Similarity=0.013  Sum_probs=207.7

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHH--HHHHHHHhC-CceE
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQV  185 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~  185 (430)
                      ++.+.+.++++++.+++++|.+++ ++++ +.|+|.+++++...+ +++||+|++....|.+..  |...++..| +++.
T Consensus       103 ~~g~~~~~~~~~~~la~~~g~~~~-~i~~-~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~  180 (438)
T 1wyu_A          103 SQGVLQATFEYQTMIAELAGLEIA-NASM-YDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT  180 (438)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSEE-CSCB-SSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHhCCCcc-ceEE-eCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEE
Confidence            567788899999999999999764 5555 477885555554443 478999998777776542  333455678 7777


Q ss_pred             EecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEecc-CcCCCCccccccc--cEE
Q 043610          186 IWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMS-SNFCSKPVDVTRF--GVI  259 (430)
Q Consensus       186 v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a-~s~G~~~idl~~~--d~~  259 (430)
                      ++. +   .+ .+|+++  ++++|++|+++|+ |+||.+.|  +|.++ +++|+++++|+. +++|..+.+ .++  |++
T Consensus       181 v~~-~---~~-~~d~~~--i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~~g~D~~  251 (438)
T 1wyu_A          181 LPL-E---GG-RTPLPE--VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GAYGADIA  251 (438)
T ss_dssp             ECC-B---TT-BCCCCC--CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HHHTCSEE
T ss_pred             EcC-c---CC-ccCHHH--hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-ccCCCCEE
Confidence            775 2   23 466666  6789999999998 99999999  78886 789999998865 667765443 333  789


Q ss_pred             EeCCCc-----cc-cCCccEEEEEcHHHHhccCCCCC-----------ccccccchhh-cCCCCCCccH---HHHHHHHH
Q 043610          260 YAGAQK-----NV-GPSGVTIVIVRKDLLGNAQDKTP-----------LMLDYKIHDE-NNSLYNTPPC---YCIYMCGL  318 (430)
Q Consensus       260 ~~s~~K-----~~-gp~G~g~l~v~~~~~~~~~~~~p-----------~~~~~~~~~~-~~~~~~T~~~---~~~~a~~~  318 (430)
                      ++|+||     |+ || |+|++++++++++.+....-           +.+++..... .....+|+|+   ..+.++.+
T Consensus       252 ~~s~kk~~~~~~~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~a  330 (438)
T 1wyu_A          252 VGDGQSLGLPMGFGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMG  330 (438)
T ss_dssp             EEECTTTTCCCGGGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHH
T ss_pred             EECCcccCCCccCCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHH
Confidence            988888     67 57 99999999998776532110           0111100000 0011245544   34444444


Q ss_pred             H--HHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCee--cC
Q 043610          319 V--FEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQ--LK  394 (430)
Q Consensus       319 a--l~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~--~~  394 (430)
                      +  ++.+.+ .|++++.+++.+++++++++|++..|+++.. +..  ....+.|.++.  ...++.++|.++||.+  .+
T Consensus       331 a~~l~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~--~~~~~~~~~~~--~~~~~~~~L~~~gi~v~~~~  404 (438)
T 1wyu_A          331 AMYLAALGP-EGLREVALKSVEMAHKLHALLLEVPGVRPFT-PKP--FFNEFALALPK--DPEAVRRALAERGFHGATPV  404 (438)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTCEECS-CSS--BCSEEEEECSS--CHHHHHHHHHHTTCCCCEEC
T ss_pred             HHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEECC-CCC--eEEEEEEeCCC--CHHHHHHHHHHCCceecccc
Confidence            4  665553 4789999999999999999999755998864 211  11234555541  2337999999999987  44


Q ss_pred             CC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          395 GH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       395 g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +. ...+.+|||++.+++++|+++++++|++++
T Consensus       405 ~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          405 PREYGENLALFAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             CTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             ccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence            43 225689999999999999999999999864

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.94  E-value=3.9e-25  Score=222.12  Aligned_cols=325  Identities=12%  Similarity=0.061  Sum_probs=225.7

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCc
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNIP--QEYSVLFLQGG  142 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~g  142 (430)
                      +++++|+.|-  .+.++.|++++.+.+.+..        ...+.  ....+..+.+.+.+++.+|.+  ++++|+++ +|
T Consensus        47 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t-~G  117 (404)
T 2o1b_A           47 LPLINMAVGIPDGPTPQGIIDHFQKALTIPE--------NQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCIL-YG  117 (404)
T ss_dssp             SCCEECCCCSCSSCCCHHHHHHHHHHTTCHH--------HHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEE-SS
T ss_pred             CCEEecCCcCCCCCCCHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEc-CC
Confidence            4466776664  3457899999988774210        11111  122333334444444444975  21267765 78


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCC
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      ++++++.++..++++||+|++..+++.+..  ..++..| +++.++...   .+..+|+++++  +++++++|++++++|
T Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~v~l~~p~n  192 (404)
T 2o1b_A          118 TKNGLVAVPTCVINPGDYVLLPDPGYTDYL--AGVLLADGKPVPLNLEP---PHYLPDWSKVDSQIIDKTKLIYLTYPNN  192 (404)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCSSHH--HHHHHTTCEEEEEECCT---TTCCCCGGGSCHHHHHHEEEEEECSSCT
T ss_pred             cHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHCCCEEEEeccCc---ccCcCCHHHHHHhhccCceEEEEcCCCC
Confidence            999999999999899999999888877643  3455677 777777642   23346888887  667899999999999


Q ss_pred             CccccCC--C---Cccc-cCCCcEEEEeccCcCCC---Ccccccc------ccEEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---KPVDVTR------FGVIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~idl~~------~d~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      +||.++|  +   |.++ +++|+++++|++|+.+.   .+.++.+      .++++.|++|++|++|  +|+++++++++
T Consensus       193 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~  272 (404)
T 2o1b_A          193 PTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMI  272 (404)
T ss_dssp             TTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHH
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHH
Confidence            9999998  3   4454 68999999999988643   2233322      2488999999999778  79999999887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+....          .  ...++++...++++..+|+...  ..++.++++++++++++.+.|++ .|+.+..  +  
T Consensus       273 ~~l~~~~----------~--~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--  333 (404)
T 2o1b_A          273 QALKKYQ----------T--HTNAGMFGALQDAAIYALNHYD--DFLEEQSNVFKTRRDRFEAMLAK-ADLPFVH--A--  333 (404)
T ss_dssp             HHHHHHH----------H--HHCCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHH-TTCCEEC--C--
T ss_pred             HHHHHHH----------h--hccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHh-cCCeecC--C--
Confidence            7643200          0  0124677788888888887532  25788899999999999999997 4776643  1  


Q ss_pred             CccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          363 RSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .++..+.+.+++ +.+. ++.+.|. ++||.+.+|..    ..+++|||++.  ++++++++++.|+++++++
T Consensus       334 ~~g~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~~  403 (404)
T 2o1b_A          334 KGGIYVWLETPP-GYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAYLY  403 (404)
T ss_dssp             CBSSEEEEECCT-TCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGGGG
T ss_pred             CcceEEEEeCCC-CCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHhh
Confidence            233345667764 2233 6888876 57999877632    14589999986  7889999999999887764

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.94  E-value=1.1e-25  Score=227.34  Aligned_cols=327  Identities=12%  Similarity=0.065  Sum_probs=231.1

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~ga  143 (430)
                      .++++.|..|.  .+.++.|++++.+.+...    .     ..+.....+..+++++.+++.+|  ++++ +|+++ +|+
T Consensus        60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~~~l~~~l~~~l~~~~g~~~~~~-~v~~~-~g~  128 (421)
T 3l8a_A           60 NPELLQMWVADMDFLPVPEIKEAIINYGREH----I-----FGYNYFNDDLYQAVIDWERKEHDYAVVKE-DILFI-DGV  128 (421)
T ss_dssp             CTTCEECCSSCCCSCCCHHHHHHHHHHHHHC----C-----SSCBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SCH
T ss_pred             CCCeeecccCCCCCCCCHHHHHHHHHHHhcC----C-----cCCCCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEc-CCH
Confidence            45677776654  457899999999987641    1     11111114566788899999999  4454 67764 889


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCC
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANET  219 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t  219 (430)
                      ++|++.++..+.++||+|++..+.+.+.  ...++..| +++.++.... +.+..+|+++|+  ++ +++++|++++++|
T Consensus       129 ~ea~~~a~~~~~~~gd~Vi~~~~~y~~~--~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~le~~i~~~~~~~vil~~p~n  205 (421)
T 3l8a_A          129 VPAISIALQAFSEKGDAVLINSPVYYPF--ARTIRLNDHRLVENSLQII-NGRFEIDFEQLEKDIIDNNVKIYLLCSPHN  205 (421)
T ss_dssp             HHHHHHHHHHHSCTEEEEEEEESCCHHH--HHHHHHTTEEEEEEECEEE-TTEEECCHHHHHHHHHHTTEEEEEEESSBT
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCcHHH--HHHHHHCCCEEEecccccc-CCCeeeCHHHHHHHhhccCCeEEEECCCCC
Confidence            9999999999999999999888877664  34556677 7777776411 011236888887  55 7999999999999


Q ss_pred             CccccCC-----CCccc-cCCCcEEEEeccCcCCC----Ccccc-------ccccEEEeCCCccccCCc--cEEEEEc-H
Q 043610          220 IHGVEFK-----EYPSA-KNSTGILVADMSSNFCS----KPVDV-------TRFGVIYAGAQKNVGPSG--VTIVIVR-K  279 (430)
Q Consensus       220 ~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~----~~idl-------~~~d~~~~s~~K~~gp~G--~g~l~v~-~  279 (430)
                      ++|.+.+     +|.++ +++|+++++|++|+...    ....+       .+..+++.|++|++|++|  +|+++++ +
T Consensus       206 ptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~  285 (421)
T 3l8a_A          206 PGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE  285 (421)
T ss_dssp             TTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH
T ss_pred             CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH
Confidence            9999987     35554 58899999999987532    11122       222378999999999777  5999998 7


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      ++.+.+.+.          . .....+++|..++.++.++++...  ..++++.++.+++++++++.|++.+|+.+..  
T Consensus       286 ~l~~~~~~~----------~-~~~~~~~~n~~~~~a~~aal~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~--  350 (421)
T 3l8a_A          286 SLRRKFQYR----------Q-LANNQHEVPTVGMIATQAAFQYGK--PWLEELKTVIEGNIKLVIKELEAKTKIKVME--  350 (421)
T ss_dssp             HHHHHHHHH----------H-HHTTCSCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCSCEEEC--
T ss_pred             HHHHHHHHH----------H-HhcccCCCCHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEeC--
Confidence            776653210          0 011235788889999998987533  2478899999999999999998755777653  


Q ss_pred             CCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +  .......+.++..+.+. ++.+.|. ++||.+.+|..    ..+.+||++.  +++++++++++.|+++++
T Consensus       351 ~--~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          351 P--EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             C--SBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred             C--CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence            1  22333436665311223 7888886 56999876532    2468999998  489999999999998764

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.94  E-value=1.4e-24  Score=215.12  Aligned_cols=315  Identities=7%  Similarity=0.017  Sum_probs=222.5

Q ss_pred             eeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc-HHHHHHHHHHHHHHHHHh--CCCCCcEEEEEeCcHHHH
Q 043610           72 FNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG-KEFKSIIEKAESDLRALL--NIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        72 ~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~-~~~~~~~~~~r~~la~l~--g~~~~~~vv~~~~gaT~a  146 (430)
                      ++|+.|.  .+.++.+++++.+.+.+... .     .+++. ....+..+.+.+.+++.+  +++++ +|++ ++|++++
T Consensus        33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~-~-----~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~-~~G~~~a  104 (369)
T 3cq5_A           33 IRLNTNENPYPPSEALVADLVATVDKIAT-E-----LNRYPERDAVELRDELAAYITKQTGVAVTRD-NLWA-ANGSNEI  104 (369)
T ss_dssp             EECSSCCCCSCCCHHHHHHHHHHHHHHGG-G-----TTSCCCTTCHHHHHHHHHHHHHHHCCCCCGG-GEEE-ESHHHHH
T ss_pred             eeccCCCCCCCCCHHHHHHHHHHHHhccc-c-----cccCCCccHHHHHHHHHHhhhhcccCCCChH-hEEE-CCChHHH
Confidence            5555543  45789999999988865210 0     11111 111223333334444444  44454 6666 5899999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCcc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHG  222 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG  222 (430)
                      ++.++.+++++||+|++..+++.+..  ..++..| +++.++...  ++  .+|+++++  +++ ++++|++++++|+||
T Consensus       105 l~~~~~~l~~~gd~Vl~~~~~y~~~~--~~~~~~g~~~~~v~~~~--~~--~~d~~~l~~~i~~~~~~~v~~~~~~nptG  178 (369)
T 3cq5_A          105 LQQLLQAFGGPGRTALGFQPSYSMHP--ILAKGTHTEFIAVSRGA--DF--RIDMDVALEEIRAKQPDIVFVTTPNNPTG  178 (369)
T ss_dssp             HHHHHHHHCSTTCEEEEEESSCTHHH--HHHHHTTCEEEEEECCT--TS--SCCHHHHHHHHHHHCCSEEEEESSCTTTC
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHHH--HHHHHcCCEEEEecCCc--CC--CCCHHHHHHHhhccCCCEEEEeCCCCCCC
Confidence            99999999899999998888776643  3456677 777777532  22  47888886  566 899999999999999


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCc---ccc-ccc---cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCC
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKP---VDV-TRF---GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTP  290 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---idl-~~~---d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p  290 (430)
                      .+.|  ++.++ +.+++++++|++|+.+...   .++ +.+   ++++.|++|++|++|  +|++++++++++.+.... 
T Consensus       179 ~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~-  257 (369)
T 3cq5_A          179 DVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVR-  257 (369)
T ss_dssp             CCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTS-
T ss_pred             CCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcC-
Confidence            9999  67775 4566999999999866532   222 222   388999999999778  799999988877643211 


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                                   ..+++|...++++..+|+..   ..++.+.++++++++++.+.|++ .|+++.+  +  .+ ..+.+
T Consensus       258 -------------~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~-~~~~~  315 (369)
T 3cq5_A          258 -------------LPYHLSALSQAAAIVALRHS---ADTLGTVEKLSVERVRVAARLEE-LGYAVVP--S--ES-NFVFF  315 (369)
T ss_dssp             -------------CTTCSCHHHHHHHHHHHHTH---HHHHTHHHHHHHHHHHHHHHHHH-HTCEEEC--C--SS-SEEEE
T ss_pred             -------------CCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHh-CCCEECC--C--CC-eEEEE
Confidence                         12357778888888888742   24678899999999999999987 6777653  1  23 34566


Q ss_pred             EcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          371 TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       371 ~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .++.  ...++.+.|.++||.+.+| ...+++|||++   +++|+++++++|+++++.+
T Consensus       316 ~~~~--~~~~l~~~l~~~gi~v~~~-~~~~~iRis~~---~~~~i~~~~~~l~~~~~~~  368 (369)
T 3cq5_A          316 GDFS--DQHAAWQAFLDRGVLIRDV-GIAGHLRTTIG---VPEENDAFLDAAAEIIKLN  368 (369)
T ss_dssp             ECCS--SHHHHHHHHHHTTEECBCC-SCTTEEEEECC---CHHHHHHHHHHHHHHHTTC
T ss_pred             ECCC--CHHHHHHHHHHCCEEEEEC-CCCCeEEEEeC---CHHHHHHHHHHHHHHHhcc
Confidence            7651  2337888999999998876 23468999998   7999999999999987653

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.94  E-value=3.1e-25  Score=221.58  Aligned_cols=320  Identities=14%  Similarity=0.110  Sum_probs=220.1

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT  144 (430)
                      +.+++|..|-  .+.++.+++++.+.+.+.    ...|..   .....+..+.+.+.+.+.+|.  +++ +++++ +|++
T Consensus        41 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~lr~~la~~~~~~~g~~~~~~-~v~~~-~g~t  111 (389)
T 1o4s_A           41 EDVINLTAGEPDFPTPEPVVEEAVRFLQKG----EVKYTD---PRGIYELREGIAKRIGERYKKDISPD-QVVVT-NGAK  111 (389)
T ss_dssp             CCCEECCCSSCSSCCCHHHHHHHHHHHTTC----CCCCCC---TTCCHHHHHHHHHHHHHHHTCCCCGG-GEEEE-SHHH
T ss_pred             CCEEEccCCCCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEe-cCHH
Confidence            3455555543  346789999998887531    111111   111233333444444444476  344 67765 8999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      ++++.++..++++||+|++..+++.+..  ..++..| +++.++..++  .+..+|+++++  +++++++|++++++|+|
T Consensus       112 ~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~~~~p~npt  187 (389)
T 1o4s_A          112 QALFNAFMALLDPGDEVIVFSPVWVSYI--PQIILAGGTVNVVETFMS--KNFQPSLEEVEGLLVGKTKAVLINSPNNPT  187 (389)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECCGG--GTTCCCHHHHHHTCCTTEEEEEEESSCTTT
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHcCCEEEEEecCCc--cCCCCCHHHHHHhcccCceEEEEcCCCCCC
Confidence            9999999999899999999888877643  3456677 7777776431  12346888887  67889999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCcCCCC---ccc---c---ccccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSNFCSK---PVD---V---TRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~id---l---~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      |.++|  +   |.++ +++|+++++|++|+.+..   +.+   +   .+.|+++.|+||++|++|  +|++++++++++.
T Consensus       188 G~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~  267 (389)
T 1o4s_A          188 GVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATA  267 (389)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHH
Confidence            99988  3   4444 588999999999886543   222   2   233689999999999888  8999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +.+..          . ... .+.+...+.++..+|+    . +++.+.++++++++++++.|.+ .|+++..  +  ..
T Consensus       268 l~~~~----------~-~~~-~~~~~~~~~a~~~~l~----~-~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~  325 (389)
T 1o4s_A          268 VSKIQ----------S-HTT-SCINTVAQYAALKALE----V-DNSYMVQTFKERKNFVVERLKK-MGVKFVE--P--EG  325 (389)
T ss_dssp             HHHHH----------H-HHT-CSCCHHHHHHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH-TTCCCCC--C--SB
T ss_pred             HHHHh----------h-hcc-cCCCHHHHHHHHHHHh----c-cHHHHHHHHHHHHHHHHHHHHh-cCCeeec--C--Cc
Confidence            43200          0 001 2345555665555553    2 4788999999999999999997 4776642  2  23


Q ss_pred             cceEEEEcCCCchhHHHHHHHH-HcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          365 FMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ...+.+.++  ....++.+.|. ++||.+.+|..  ..+++|||++.  ++++++++++.|+++++
T Consensus       326 ~~~~~~~~~--~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          326 AFYLFFKVR--GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT--SIERLTEALDRIEDFLN  387 (389)
T ss_dssp             SSEEEEECS--SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS--CHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEeCC--CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence            334555665  11337888886 88999876532  24689999984  89999999999999875

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.94  E-value=2e-25  Score=221.09  Aligned_cols=316  Identities=14%  Similarity=0.102  Sum_probs=218.5

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT  144 (430)
                      +.+++|..|-  .+.++.+++++.+.+.+.    ...|..   .....+..+.+.+.+.+.+|  .+++ +++++ +|++
T Consensus        29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~~~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~~   99 (370)
T 2z61_A           29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEG----KTHYTD---SRGILELREKISELYKDKYKADIIPD-NIIIT-GGSS   99 (370)
T ss_dssp             CCCEECCCCSCSSCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHHSSCCCCGG-GEEEE-SSHH
T ss_pred             CCEEEccCCCCCCCCCHHHHHHHHHHHHcC----ccCCCC---CCCCHHHHHHHHHHHHHHhCCCCChh-hEEEC-CChH
Confidence            3455555543  235789999998887531    111111   11122223333333433334  4444 67765 7899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      ++++.++..++++||+|++..+++.+..  ..++..| +++.++          +|+++++  +++++++|++++++|+|
T Consensus       100 ~a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~v~----------~d~~~l~~~l~~~~~~v~~~~p~npt  167 (370)
T 2z61_A          100 LGLFFALSSIIDDGDEVLIQNPCYPCYK--NFIRFLGAKPVFCD----------FTVESLEEALSDKTKAIIINSPSNPL  167 (370)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSCCTHHH--HHHHHTTCEEEEEC----------SSHHHHHHHCCSSEEEEEEESSCTTT
T ss_pred             HHHHHHHHHhcCCCCEEEEeCCCchhHH--HHHHHcCCEEEEeC----------CCHHHHHHhcccCceEEEEcCCCCCc
Confidence            9999999999999999998888777643  3455667 554443          4667776  67789999999999999


Q ss_pred             cccCC-CCccc-cCCCcEEEEeccCcCCCC---ccccc------cccEEEeCCCccccCCc--cEEEEEcHHHHhccCCC
Q 043610          222 GVEFK-EYPSA-KNSTGILVADMSSNFCSK---PVDVT------RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       222 G~~~p-ei~~~-~~~g~~lvvD~a~s~G~~---~idl~------~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~  288 (430)
                      |.++| +|.++ +++|+++++|++|+.+..   +.++.      ..|+++.|+||++|++|  +|++++++++++.+...
T Consensus       168 G~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  247 (370)
T 2z61_A          168 GEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKL  247 (370)
T ss_dssp             CCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHH
T ss_pred             CcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHH
Confidence            99999 85554 688999999999986643   23332      23588999999999888  99999999887764320


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      .          .  ...+++|...++++..+|+.+. ...++.+.++++++++++.+.|.+ .|+++..  +  .+...+
T Consensus       248 ~----------~--~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~~~~~  309 (370)
T 2z61_A          248 Q----------Q--NLFISAPTISQYAALKAFEKET-EREINSMIKEFDRRRRLVLKYVKD-FGWEVNN--P--IGAYYV  309 (370)
T ss_dssp             H----------H--HHTSSSCHHHHHHHGGGGSHHH-HHHHHHHHHHHHHHHHHHHHHHHH-TTCBCCC--C--CBTTEE
T ss_pred             H----------h--hcccCCCHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHHHHHHHH-cCCeecC--C--CcceEE
Confidence            0          0  0124677888888888887511 225788899999999999999997 4776643  1  123334


Q ss_pred             EEEcCCCchhHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          369 PFTLEKSDLEAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       369 ~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      .+.+++  ...++.+.|. ++||.+.+|..    ..+++|||++  +++++++++++.|+++++
T Consensus       310 ~~~~~~--~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~  369 (370)
T 2z61_A          310 FPNIGE--DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEGLERIKEFLN  369 (370)
T ss_dssp             CCBCSS--CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred             EEecCC--CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence            456653  2337888886 78999876532    1457999999  599999999999998875

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.94  E-value=4e-25  Score=220.19  Aligned_cols=321  Identities=9%  Similarity=0.015  Sum_probs=222.1

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCc-EEEEEeCcHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEY-SVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~-~vv~~~~gaT~  145 (430)
                      .+++|..|-  .+.++.+++++.+.+.+    +...|..   .....+..+.+.+.+++.+|.+ +.+ +|+++ +|+++
T Consensus        31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~~~~y~~---~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~-~g~~~  102 (386)
T 1u08_A           31 QAINLSQGFPDFDGPRYLQERLAHHVAQ----GANQYAP---MTGVQALREAIAQKTERLYGYQPDADSDITVT-AGATE  102 (386)
T ss_dssp             TCEECCCSSCSSCCCHHHHHHHHHHHHT----TCCSCCC---TTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEE-SSHHH
T ss_pred             CeEEecCCCCCCCCCHHHHHHHHHHHHh----hccCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEc-CChHH
Confidence            345555543  24678999999988753    1111111   1112344445555666666854 222 56664 88999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG  222 (430)
                      +++.++..++++||+|++..+++.+..  ..++..| +++.++...+   +..+|+++++  +++++++|++++++|+||
T Consensus       103 a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~---~~~~d~~~l~~~l~~~~~~v~l~~p~nptG  177 (386)
T 1u08_A          103 ALYAAITALVRNGDEVICFDPSYDSYA--PAIALSGGIVKRMALQPP---HFRVDWQEFAALLSERTRLVILNTPHNPSA  177 (386)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECCTT---TCCCCHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCchhHH--HHHHHcCCEEEEeecCcc---cCcCCHHHHHHhhcccCEEEEEeCCCCCCC
Confidence            999999999899999999888877643  3556677 7777776431   1247888887  778899999999999999


Q ss_pred             ccCC-----CCccc-cCCCcEEEEeccCcCC----CC--cc-ccc---cccEEEeCCCccccCCc--cEEEEEcHHHHhc
Q 043610          223 VEFK-----EYPSA-KNSTGILVADMSSNFC----SK--PV-DVT---RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGN  284 (430)
Q Consensus       223 ~~~p-----ei~~~-~~~g~~lvvD~a~s~G----~~--~i-dl~---~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~  284 (430)
                      .++|     +|.++ +++|+++++|++|+..    ..  ++ .+.   +.++++.|++|++|++|  +|++++++++++.
T Consensus       178 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  257 (386)
T 1u08_A          178 TVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAE  257 (386)
T ss_dssp             CCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHH
Confidence            9998     34554 6899999999998752    21  22 221   23689999999999889  8999999988776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      +...    ..        ...++.+...+.++..+|+..  ...++.++++++++++++++.|++ .|+.+..  +  ..
T Consensus       258 l~~~----~~--------~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~  318 (386)
T 1u08_A          258 IRKV----HQ--------YLTFSVNTPAQLALADMLRAE--PEHYLALPDFYRQKRDILVNALNE-SRLEILP--C--EG  318 (386)
T ss_dssp             HHHH----HH--------HHTSSCCHHHHHHHHHHHHHC--THHHHTHHHHHHHHHHHHHHHTTS-SSCEECC--C--CB
T ss_pred             HHHH----HH--------hhccCCChHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHH-CCCeecC--C--Cc
Confidence            4320    00        011355666777788888753  225788899999999999999987 5887653  2  12


Q ss_pred             cceEEEEcCCC--chhHHHHHHHH-HcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          365 FMNVPFTLEKS--DLEAEFVKEAA-KEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       365 ~~iv~f~~~~~--~~~~~~~~~L~-~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      ...+.+.+++.  ....++.++|. ++||.+.+|..      ..+++|||++.  ++++++++++.|++
T Consensus       319 g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~  385 (386)
T 1u08_A          319 TYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK--KESTLLAAAERLRQ  385 (386)
T ss_dssp             SSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS--CHHHHHHHHHHHTT
T ss_pred             eEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC--CHHHHHHHHHHHhh
Confidence            33566777642  11337888775 67999876531      23579999974  89999999999865

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.94  E-value=3.6e-24  Score=220.87  Aligned_cols=328  Identities=13%  Similarity=0.040  Sum_probs=233.6

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHHHHHHhhcCC---
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQFAAVPLNLCT---  156 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~~~~~~sl~~---  156 (430)
                      .++.+.+++.+.+..+...+.  + ....++...++.+++++.+++++|.+ +..+++++ +|+|+++..++.++..   
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~-~ggt~a~~~a~~a~~~~~~  151 (497)
T 3mc6_A           76 GGDDLIHLQTIAYEKYCVANQ--L-HPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTT-SGGTESLLLACLSAKMYAL  151 (497)
T ss_dssp             CCHHHHHHHHHHHHHTSSCBT--T-CTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEE-SSHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHhhcCC--C-CcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEc-CcHHHHHHHHHHHHHHHHH
Confidence            346788887777654322111  0 11224667788889999999999998 22266665 7899999999888743   


Q ss_pred             --CC---CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--
Q 043610          157 --PN---DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--  226 (430)
Q Consensus       157 --~g---d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--  226 (430)
                        +|   |+|++..+.+.+.  ...++..| +++.++..+   .+..+|+++|+  +++++++|++++++|++|.+.|  
T Consensus       152 ~~~g~~~~~Vi~~~~~h~~~--~~~~~~~G~~~~~v~~~~---~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~  226 (497)
T 3mc6_A          152 HHRGITEPEIIAPVTAHAGF--DKAAYYFGMKLRHVELDP---TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIE  226 (497)
T ss_dssp             HHSCCSSCEEEEETTSCHHH--HHHHHHSCCEEEEECBCT---TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCT
T ss_pred             hcCCCCCceEEEeCCccHHH--HHHHHHcCCeEEEEecCc---ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHH
Confidence              45   7887766666553  34556678 888887643   12357888887  7889999999999999999999  


Q ss_pred             CCccc-cCCCcEEEEeccCcC-----------CCC-ccccc--cccEEEeCCCccc-cCCccEEEEEcHHHHhccCC-CC
Q 043610          227 EYPSA-KNSTGILVADMSSNF-----------CSK-PVDVT--RFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD-KT  289 (430)
Q Consensus       227 ei~~~-~~~g~~lvvD~a~s~-----------G~~-~idl~--~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~-~~  289 (430)
                      +|.++ +++|+++++|++|+.           |.. +++..  ..|+++.++|||+ ||.|+|+++++++.+..... ..
T Consensus       227 ~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~  306 (497)
T 3mc6_A          227 GLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVN  306 (497)
T ss_dssp             TTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCB
T ss_pred             HHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhccc
Confidence            78886 689999999999872           222 34443  3479999999998 69999999998776554321 11


Q ss_pred             CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCCCCCCccceE
Q 043610          290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~~~~rs~~iv  368 (430)
                      +.+...  ........+|.+...+.++..+++.+.. .|++++.++..+++++++++|.+ ..|++++. .+  .. .++
T Consensus       307 ~~~~~~--~~~~~~~~g~~~~~~~~a~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~-~~--~~-~~v  379 (497)
T 3mc6_A          307 PAWTGG--LYGSPTLAGSRPGAIVVGCWATMVNMGE-NGYIESCQEIVGAAMKFKKYIQENIPDLDIMG-NP--RY-SVI  379 (497)
T ss_dssp             TTCTTS--CBCCSSSCSSCBHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCTTCEECS-CC--CS-SEE
T ss_pred             ccccCC--CcCCcCcccCCcchhHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec-CC--Ce-eEE
Confidence            111110  0011223356777777888888887764 47899999999999999999998 46888763 21  22 467


Q ss_pred             EEEcCCCchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          369 PFTLEKSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       369 ~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +|..++  .+. ++.+.|.++||.+..+. ....+|+++. .++++|+++++++|+++++.
T Consensus       380 ~~~~~~--~~~~~l~~~L~~~Gi~v~~~~-~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~  436 (497)
T 3mc6_A          380 SFSSKT--LNIHELSDRLSKKGWHFNALQ-KPVALHMAFT-RLSAHVVDEICDILRTTVQE  436 (497)
T ss_dssp             EEECTT--TTHHHHHHHHHTTTCBCEECC-SSCCEEEECC-TTTTCTHHHHHHHHHHHHHH
T ss_pred             EEeCCC--CCHHHHHHHHHhCCEEEecCC-CCCeEEEEEe-CCCHHHHHHHHHHHHHHHHH
Confidence            777653  333 79999999999875432 2346899998 78999999999999998764

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.94  E-value=6.5e-25  Score=218.92  Aligned_cols=325  Identities=10%  Similarity=0.034  Sum_probs=221.6

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHH-HHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKS-IIEKAESDLRALLN--IPQEYSVLFLQGGAT  144 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~r~~la~l~g--~~~~~~vv~~~~gaT  144 (430)
                      +++.|+.|.  .+.++.|++++.+.+.+    +.     .++.....+ ..+++.+.+.+.+|  .+++ +|+++ +|++
T Consensus        29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~~-----~~y~~~~~~~lr~~la~~l~~~~g~~~~~~-~v~~t-~g~~   97 (390)
T 1d2f_A           29 DLLPFTISDMDFATAPCIIEALNQRLMH----GV-----FGYSRWKNDEFLAAIAHWFSTQHYTAIDSQ-TVVYG-PSVI   97 (390)
T ss_dssp             -CEECCSSSCSSCCCHHHHHHHHHHHTT----CC-----CCCCCSCCHHHHHHHHHHHHHHSCCCCCGG-GEEEE-SCHH
T ss_pred             CeeEeeecCCCCCCCHHHHHHHHHHHhC----CC-----CCCCCCChHHHHHHHHHHHHHhcCCCCCHH-HEEEc-CCHH
Confidence            455555544  35788999999988743    11     111111222 33344444444457  4554 67664 8899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCC
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETI  220 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~  220 (430)
                      ++++.++.++.++||+|++..+++.+.  ...++..| +++.++...+. ....+|+++++  +++ ++++|++++++|+
T Consensus        98 ~al~~~~~~l~~~gd~vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~l~~p~np  174 (390)
T 1d2f_A           98 YMVSELIRQWSETGEGVVIHTPAYDAF--YKAIEGNQRTVMPVALEKQA-DGWFCDMGKLEAVLAKPECKIMLLCSPQNP  174 (390)
T ss_dssp             HHHHHHHHHSSCTTCEEEEEESCCHHH--HHHHHHTTCEEEEEECEECS-SSEECCHHHHHHHHTSTTEEEEEEESSCTT
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCcHHH--HHHHHHCCCEEEEeecccCC-CccccCHHHHHHHhccCCCeEEEEeCCCCC
Confidence            999999999989999999888877764  34456677 77777764210 01136788887  554 8999999999999


Q ss_pred             ccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cccccc----cc-cEEEeCCCccccCCc--cEEEEEc-HHHH
Q 043610          221 HGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVT----RF-GVIYAGAQKNVGPSG--VTIVIVR-KDLL  282 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~----~~-d~~~~s~~K~~gp~G--~g~l~v~-~~~~  282 (430)
                      ||.++|  +   |.++ +++|+++++|++|+.+.    ...++.    ++ |. +.|++|++|++|  +|+++++ ++++
T Consensus       175 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~  253 (390)
T 1d2f_A          175 TGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSR  253 (390)
T ss_dssp             TCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHH
T ss_pred             CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHH
Confidence            999998  3   4443 58999999999998632    223332    22 66 999999999878  6999985 6776


Q ss_pred             hccCCCCCccccccchhhc-CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDEN-NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVEK  360 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~-~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~~  360 (430)
                      +.+..       .    .. ...++++|...++++..+|+...  ..++.++++++++++++.+.|++ .+|+.+.+  +
T Consensus       254 ~~~~~-------~----~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~  318 (390)
T 1d2f_A          254 DAYLS-------A----LKGRDGLSSPSVLALTAHIAAYQQGA--PWLDALRIYLKDNLTYIADKMNAAFPELNWQI--P  318 (390)
T ss_dssp             HHHHH-------H----HHTTSCCCSCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCC--C
T ss_pred             HHHHH-------H----HhhhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEec--C
Confidence            65321       0    01 12234788888888888887532  24678899999999999999987 45765542  1


Q ss_pred             CCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          361 SVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                        .++..+.+.+++.+.+. ++.+.|. ++||.+.+|..    ..+++|||++.  ++++++++++.|++++++
T Consensus       319 --~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~  388 (390)
T 1d2f_A          319 --QSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIRA  388 (390)
T ss_dssp             --SBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred             --CccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence              23344456776321233 7888888 67999877542    24589999986  689999999999998865

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.94  E-value=3e-25  Score=222.85  Aligned_cols=327  Identities=11%  Similarity=0.093  Sum_probs=222.3

Q ss_pred             CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEe
Q 043610           68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQ  140 (430)
Q Consensus        68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~  140 (430)
                      .+..+.|..|-.     +.++.+++++.+.+.+.    ...|..   .....+..+.+.+.+.+.+|  .+++ +|+++ 
T Consensus        37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~l~~~la~~l~~~~g~~~~~~-~v~~t-  107 (406)
T 1xi9_A           37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG----HNYYGD---SEGLPELRKAIVEREKRKNGVDITPD-DVRVT-  107 (406)
T ss_dssp             TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-
T ss_pred             CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCcHHHHHHHHHHHHHhcCCCCCHH-HEEEc-
Confidence            344555555433     56789999998887531    111111   11122333344444444444  4444 67764 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      +|+++++..++..++++||+|++..+++.+.  ...++..| +++.++..++  .+..+|+++++  +++++++|+++++
T Consensus       108 ~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~v~i~~p  183 (406)
T 1xi9_A          108 AAVTEALQLIFGALLDPGDEILVPGPSYPPY--TGLVKFYGGKPVEYRTIEE--EDWQPDIDDIRKKITDRTKAIAVINP  183 (406)
T ss_dssp             SHHHHHHHHHHHHHCCTTCEEEEEESCCHHH--HHHHHHTTCEEEEEEEEGG--GTSEECHHHHHHHCCTTEEEEEEESS
T ss_pred             CChHHHHHHHHHHhCCCCCEEEEcCCCCccH--HHHHHHcCCEEEEeecCCC--cCCcCCHHHHHHhhCcCceEEEEECC
Confidence            8899999999999989999999888877664  34456677 7777776421  22246888887  7788999999999


Q ss_pred             CCCccccCC-----CCccc-cCCCcEEEEeccCcCCCC---ccccc----cc-cEEEeCCCccccCCc--cEEEE--EcH
Q 043610          218 ETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSK---PVDVT----RF-GVIYAGAQKNVGPSG--VTIVI--VRK  279 (430)
Q Consensus       218 ~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~---~idl~----~~-d~~~~s~~K~~gp~G--~g~l~--v~~  279 (430)
                      +|+||.++|     +|.++ +++|+++++|++|+.+..   +..+.    +. ++++.|++|++|++|  +|+++  .++
T Consensus       184 ~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (406)
T 1xi9_A          184 NNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPE  263 (406)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTT
T ss_pred             CCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCc
Confidence            999999987     34444 588999999999876432   22332    23 578899999999888  89999  788


Q ss_pred             ----HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCcee
Q 043610          280 ----DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYK  355 (430)
Q Consensus       280 ----~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~  355 (430)
                          ++++.+..       .   ...  . +++|...++++..+|+...  .+++.+.++++++++++++.|.+..|+.+
T Consensus       264 ~~~~~l~~~l~~-------~---~~~--~-~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  328 (406)
T 1xi9_A          264 NKLSEVREAIDR-------L---ARI--R-LCPNTPAQFAAIAGLTGPM--DYLKEYMKKLKERRDYIYKRLNEIPGIST  328 (406)
T ss_dssp             CTTHHHHHHHHH-------H---HHH--T-CCSCSHHHHHHHHHHHSCC--HHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred             hhHHHHHHHHHH-------H---HHh--h-cCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence                77665421       0   011  1 3566777888888886322  13678889999999999999997447776


Q ss_pred             cCCCCCCCccceEEEEcCC--CchhHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          356 CPVEKSVRSFMNVPFTLEK--SDLEAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       356 ~~~~~~~rs~~iv~f~~~~--~~~~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..  +  .+...+.+.+++  .....++.+.|. ++||.+.+|..    ..+++|||++  +++++++++++.|++++++
T Consensus       329 ~~--~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i~~~~~~l~~~l~~  402 (406)
T 1xi9_A          329 TK--P--QGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFMKE  402 (406)
T ss_dssp             CC--C--CBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             ec--C--CeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence            43  2  122333335552  112337888886 88999876532    1457999997  7999999999999998865

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.93  E-value=8.8e-25  Score=216.10  Aligned_cols=312  Identities=13%  Similarity=0.066  Sum_probs=221.6

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .+.+++|+.|.  .+.++.+++++.+.+.+.          +++...   ...++|+.+++++|++++ +|+++ +|+++
T Consensus        23 ~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~----------~~y~~~---~~~~l~~~la~~~~~~~~-~v~~~-~g~~~   87 (364)
T 1lc5_A           23 PDQLLDFSANINPLGMPVSVKRALIDNLDCI----------ERYPDA---DYFHLHQALARHHQVPAS-WILAG-NGETE   87 (364)
T ss_dssp             GGGSEECSSCCCTTCCCHHHHHHHHHTGGGG----------GSCCCT---TCHHHHHHHHHHHTSCGG-GEEEE-SSHHH
T ss_pred             ccceEEeccccCCCCCCHHHHHHHHHHHHHh----------hcCCCC---CHHHHHHHHHHHHCcCHH-HEEEC-CCHHH
Confidence            34566776664  347889999998877531          111111   245888999999998765 67765 88999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcccc-c-cCCCccEEEEeecCCCcc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDAL-E-QNPDAKYLHICANETIHG  222 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l-~-i~~~~~lv~i~~~~t~tG  222 (430)
                      +++.++..+  +||+|++..+++.+.  ...++..| +++.++....  .+..+ ++++ + +++++++|++++++|+||
T Consensus        88 al~~~~~~~--~gd~vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~--~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG  160 (364)
T 1lc5_A           88 SIFTVASGL--KPRRAMIVTPGFAEY--GRALAQSGCEIRRWSLREA--DGWQL-TDAILEALTPDLDCLFLCTPNNPTG  160 (364)
T ss_dssp             HHHHHHHHH--CCSEEEEEESCCTHH--HHHHHHTTCEEEEEECCGG--GTTCC-CTTHHHHCCTTCCEEEEESSCTTTC
T ss_pred             HHHHHHHHc--CCCeEEEeCCCcHHH--HHHHHHcCCeEEEEeCCcc--cccch-hHHHHHhccCCCCEEEEeCCCCCCC
Confidence            999998888  679999888877664  34556677 7777776431  12112 3543 3 667899999999999999


Q ss_pred             ccCC--C---Cccc-cCCCcEEEEeccCcCCCC----cccc-ccc--cEEEeCCCccccCCc--cEEEE-EcHHHHhccC
Q 043610          223 VEFK--E---YPSA-KNSTGILVADMSSNFCSK----PVDV-TRF--GVIYAGAQKNVGPSG--VTIVI-VRKDLLGNAQ  286 (430)
Q Consensus       223 ~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~idl-~~~--d~~~~s~~K~~gp~G--~g~l~-v~~~~~~~~~  286 (430)
                      .++|  +   |.++ +++|+++++|++|+.+..    .+++ +..  ++++.|++|++|++|  +|+++ .++++++.+.
T Consensus       161 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~  240 (364)
T 1lc5_A          161 LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMR  240 (364)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHH
Confidence            9998  3   4443 578999999999875432    1332 223  588999999999778  69999 8998877643


Q ss_pred             CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                      +..              ..+++|...++++..+|+. .  ..++.++++++++++++.+.|.+..|+.+.+  +  .+. 
T Consensus       241 ~~~--------------~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~--~g~-  298 (364)
T 1lc5_A          241 RQQ--------------MPWSVNALAALAGEVALQD-S--AWQQATWHWLREEGARFYQALCQLPLLTVYP--G--RAN-  298 (364)
T ss_dssp             HHS--------------CTTCSCHHHHHHHHHGGGC-H--HHHHHHHHHHHHHHHHHHHHHHTSTTEEECC--C--SSS-
T ss_pred             HhC--------------CCCCCCHHHHHHHHHHHhC-c--HHHHHHHHHHHHHHHHHHHHHhcCCCCEECC--C--CCe-
Confidence            200              1246788888888888864 2  2578889999999999999998755887653  1  232 


Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          367 NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       367 iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+.+++ . ..++.+.|.++||.+.+|...    .+++|||+.   +++|+++++++|++++++
T Consensus       299 ~~~~~~~~-~-~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~  359 (364)
T 1lc5_A          299 YLLLRCER-E-DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVLTG  359 (364)
T ss_dssp             EEEEEESC-T-TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHC--
T ss_pred             EEEEECCC-c-HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC---CHHHHHHHHHHHHHHhhc
Confidence            35567764 1 226888998899998776421    458999976   699999999999998664

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.93  E-value=7.2e-25  Score=217.56  Aligned_cols=320  Identities=13%  Similarity=0.054  Sum_probs=220.8

Q ss_pred             CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----CCC--CCcEEEEE
Q 043610           68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----NIP--QEYSVLFL  139 (430)
Q Consensus        68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~~--~~~~vv~~  139 (430)
                      .+.+++|+.|-.  +.++.+++++.+.+.+.        ..+.++..  ....++|+.+++++    |.+  ++.+|+++
T Consensus        24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~y~~~--~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~   93 (376)
T 2dou_A           24 GVGLIDLSIGSTDLPPPEAPLKALAEALNDP--------TTYGYCLK--SCTLPFLEEAARWYEGRYGVGLDPRREALAL   93 (376)
T ss_dssp             TCCCEECSSCCCCCCCCHHHHHHHHHHTTCG--------GGSSCCCH--HHHHHHHHHHHHHHHHHHSCCCCTTTSEEEE
T ss_pred             CCCEEeccCCCCCCCCCHHHHHHHHHHHhCC--------CcCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCccEEEc
Confidence            345666666542  35789999998877431        01222221  12345555555555    875  22267765


Q ss_pred             eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee
Q 043610          140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA  216 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~  216 (430)
                       +|++++++.++..+.++||+|++..+++.+.  ...++..| +++.++. +   .+..+|+++++  +++++++|++++
T Consensus        94 -~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~--~~~~~~~g~~~~~~~~-~---~~~~~d~~~l~~~l~~~~~~v~l~~  166 (376)
T 2dou_A           94 -IGSQEGLAHLLLALTEPEDLLLLPEVAYPSY--FGAARVASLRTFLIPL-R---EDGLADLKAVPEGVWREAKVLLLNY  166 (376)
T ss_dssp             -SSHHHHHHHHHHHHCCTTCEEEEESSCCHHH--HHHHHHTTCEEEEECB-C---TTSSBCGGGSCHHHHHHEEEEEECS
T ss_pred             -CCcHHHHHHHHHHhcCCCCEEEECCCCcHhH--HHHHHHcCCEEEEeeC-C---CCCCCCHHHHHHhhccCceEEEECC
Confidence             7899999999999988999999887776664  24456677 7777766 2   23347888887  667899999999


Q ss_pred             cCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC---Cc---ccc-c--cccEEEeCCCccccCCc--cEEEEEcH
Q 043610          217 NETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---KP---VDV-T--RFGVIYAGAQKNVGPSG--VTIVIVRK  279 (430)
Q Consensus       217 ~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~---idl-~--~~d~~~~s~~K~~gp~G--~g~l~v~~  279 (430)
                      ++|+||.++|  +   |.++ +++|+++++|++|+.+.   .+   +++ +  +.++++.|++|++|++|  +|+++.++
T Consensus       167 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  246 (376)
T 2dou_A          167 PNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE  246 (376)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH
T ss_pred             CCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH
Confidence            9999999998  3   4443 58999999999987542   22   222 1  22478899999999778  79999999


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                      ++++.+....          .  ...++.|...++++..+|+...  ..++.+.++++++++++.+.|.+ . +.+..  
T Consensus       247 ~~~~~l~~~~----------~--~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~--  308 (376)
T 2dou_A          247 EALARLERVK----------G--VIDFNQYAGVLRMGVEALKTPK--EVVRGYARVYRERALGMAEALKG-V-LSLLP--  308 (376)
T ss_dssp             HHHHHHHHHH----------H--HHCCCSCHHHHHHHHHHHTSCH--HHHHHHHHHHHHHHHHHHHHHTT-T-SEECC--
T ss_pred             HHHHHHHHHH----------H--hcccCCCHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHH-h-cCccC--
Confidence            8877643200          0  0113557777888877886422  24678889999999999999986 4 55542  


Q ss_pred             CCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +  .+...+.+.+++.....++.+.|.++||.+.+|..    ..+++|||++.  ++++++++++.|++++
T Consensus       309 ~--~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          309 P--RATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR--PLEELLEAAKRIREAL  375 (376)
T ss_dssp             C--CBSSEEEEECCTTCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHTC
T ss_pred             C--CeeEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence            1  13334557776421123789999888999876532    14589999985  8999999999998764

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.93  E-value=7e-25  Score=220.55  Aligned_cols=325  Identities=10%  Similarity=0.031  Sum_probs=221.6

Q ss_pred             CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----CC--CCCcEEEEE
Q 043610           68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----NI--PQEYSVLFL  139 (430)
Q Consensus        68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~--~~~~~vv~~  139 (430)
                      .+.+++|+.|-.  +.++.+++++.+.+.+..   ...|..   ....    .++|+.+++++    |.  +++.+|+++
T Consensus        36 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~---~~~y~~---~~g~----~~l~~~ia~~~~~~~g~~~~~~~~v~~t  105 (412)
T 2x5d_A           36 GEDIIDLSMGNPDGPTPPHIVEKLCTVAQRED---THGYST---SRGI----PRLRRAISHWYRDRYDVQIDPESEAIVT  105 (412)
T ss_dssp             TCCCEECSSCCCCSCCCHHHHHHHHHTC------------C---TTCC----HHHHHHHHHHHHHHHCCCCCTTTSEEEE
T ss_pred             CCCEEecCCCCCCCCCCHHHHHHHHHHHhCCC---CCCCCC---CCCc----HHHHHHHHHHHHHHhCCCCCCCcCEEEc
Confidence            345667766542  467899999988765310   000100   1112    24455555555    86  331267765


Q ss_pred             eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee
Q 043610          140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA  216 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~  216 (430)
                       +|++++++.++..++++||+|++..+++.+..  ..++..| +++.++...+  .+..+|+++++  +++++++|++++
T Consensus       106 -~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~v~l~~  180 (412)
T 2x5d_A          106 -IGSKEGLAHLMLATLDHGDTILVPNPSYPIHI--YGAVIAGAQVRSVPLVPG--IDFFNELERAIRESIPKPRMMILGF  180 (412)
T ss_dssp             -SCHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHHHTCEEEEEECSTT--SCHHHHHHHHHHTEESCCSEEEEES
T ss_pred             -CChHHHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHcCCEEEEeecCCc--cCCCCCHHHHHHhcccCceEEEECC
Confidence             78999999999999999999998888877643  3455677 7777776431  12225677776  678899999999


Q ss_pred             cCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC----ccc---cc---cccEEEeCCCccccCCc--cEEEEEc
Q 043610          217 NETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK----PVD---VT---RFGVIYAGAQKNVGPSG--VTIVIVR  278 (430)
Q Consensus       217 ~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~id---l~---~~d~~~~s~~K~~gp~G--~g~l~v~  278 (430)
                      ++|+||.++|  +   |.++ +++|+++++|++|+.+..    +.+   +.   +.++++.|++|++|++|  +|+++++
T Consensus       181 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (412)
T 2x5d_A          181 PSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN  260 (412)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEEC
T ss_pred             CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcC
Confidence            9999999998  3   4444 588999999999986542    222   22   23588999999999778  7999999


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV  358 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~  358 (430)
                      +++++.+...    ..        ...++.+...++++..+|+...  ..++.+.++++++++++.+.|.+. |+.+.. 
T Consensus       261 ~~~~~~l~~~----~~--------~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-  324 (412)
T 2x5d_A          261 PELVSALARI----KS--------YHDYGTFTPLQVAAIAALEGDQ--QCVRDIARQYQQRRDVLVKGLREA-GWMVEN-  324 (412)
T ss_dssp             HHHHHHHHHH----HH--------HHCCCCCHHHHHHHHHHHHSCS--HHHHHHHHHHHHHHHHHHHHHHHH-TCCCCC-
T ss_pred             HHHHHHHHHH----Hh--------hhccCCCHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHC-CCEecC-
Confidence            9887764320    00        0124667788888877776422  246888999999999999999974 776542 


Q ss_pred             CCCCCccceEEEEcCCCch----hHHHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          359 EKSVRSFMNVPFTLEKSDL----EAEFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~----~~~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       +  .+...+.+.++. +.    ..++.+.|. ++||.+.+|..    ..+++|||++.  ++++++++++.|++++++.
T Consensus       325 -~--~~g~~~~~~~~~-~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~  398 (412)
T 2x5d_A          325 -P--KASMYVWAKIPE-PYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLRQAVRGIKAMFRAD  398 (412)
T ss_dssp             -C--SBSSEEEEECCT-TTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred             -C--CeeeEEEEEcCC-ccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence             1  233345567763 22    337888885 46999876532    14589999986  8999999999999988753

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.93  E-value=9e-25  Score=218.44  Aligned_cols=325  Identities=10%  Similarity=0.045  Sum_probs=221.2

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT~  145 (430)
                      .+++|+.|-  .++++.|++++.+.+.+.    .     .++.....+..+.+.+.+++.+|  .+++ +|+++ +|+++
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~t-~g~~~  100 (399)
T 1c7n_A           32 EVVPLSVADMEFKNPPELIEGLKKYLDET----V-----LGYTGPTEEYKKTVKKWMKDRHQWDIQTD-WIINT-AGVVP  100 (399)
T ss_dssp             TCCCCCSSSCSSCCCHHHHHHHHHHHHHC----C-----CSSBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SSHHH
T ss_pred             CceeeeecCCCCCCCHHHHHHHHHHHhcC----C-----CCCCCCcHHHHHHHHHHHHHHhCCCCChh-hEEEc-CCHHH
Confidence            455555544  356889999999887531    1     11111123334444555555568  4454 67764 88999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC-CCCCccccc--cC-CCccEEEEeecCCC
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT-KIPNFDALE--QN-PDAKYLHICANETI  220 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g-~~~d~~~l~--i~-~~~~lv~i~~~~t~  220 (430)
                      +++.++.++.++||+|++..+.+.+..  ..++..| +++.++...+  .| ..+|+++++  ++ +++++|++++++|+
T Consensus       101 a~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~g~~~~d~~~l~~~l~~~~~~~v~~~~~~np  176 (399)
T 1c7n_A          101 AVFNAVREFTKPGDGVIIITPVYYPFF--MAIKNQERKIIECELLEK--DGYYTIDFQKLEKLSKDKNNKALLFCSPHNP  176 (399)
T ss_dssp             HHHHHHHHHCCTTCEEEECSSCCTHHH--HHHHTTTCEEEECCCEEE--TTEEECCHHHHHHHHTCTTEEEEEEESSBTT
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCcHhHH--HHHHHcCCEEEecccccC--CCCEEEcHHHHHHHhccCCCcEEEEcCCCCC
Confidence            999999999899999998777766642  3455667 6666655311  11 136788887  55 78999999999999


Q ss_pred             ccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccccccc-----c--cEEEeCCCccccCCc--cEEEEEc-HH
Q 043610          221 HGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTR-----F--GVIYAGAQKNVGPSG--VTIVIVR-KD  280 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~-----~--d~~~~s~~K~~gp~G--~g~l~v~-~~  280 (430)
                      ||.++|  +   |.++ +++|+++++|++|+.+.    .+.++..     .  ++++.|++|++|++|  +|+++++ ++
T Consensus       177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  256 (399)
T 1c7n_A          177 VGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPD  256 (399)
T ss_dssp             TTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHH
T ss_pred             CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHH
Confidence            999998  3   4444 58999999999988532    2233322     2  378899999999778  7999997 56


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVE  359 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~  359 (430)
                      +++.+....          . ....+++|...++++..+|+...  ..++.+.++++++++++.+.|++ .+|+.+..  
T Consensus       257 ~~~~l~~~~----------~-~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--  321 (399)
T 1c7n_A          257 IRERFTKSR----------D-ATSGMPFTTLGYKACEICYKECG--KWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPL--  321 (399)
T ss_dssp             HHHHHHHHH----------H-HTTCCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCC--
T ss_pred             HHHHHHHHH----------h-hcccCCCCHHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHhhCCCCeEec--
Confidence            766542100          0 01124678888888888887432  25788899999999999999987 45776542  


Q ss_pred             CCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          360 KSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +  .+...+.+.+++.+.+. ++.+.|. ++||.+.+|..    ..+++|||++.  ++++++++++.|++++++
T Consensus       322 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~  392 (399)
T 1c7n_A          322 I--EGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVIQESLERLNKALKD  392 (399)
T ss_dssp             C--SBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHH
T ss_pred             C--CceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHHHHHHHHHHHHHHH
Confidence            1  23344456776311233 7888886 68999877542    24589999986  488999999999887764

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.93  E-value=2.6e-26  Score=234.65  Aligned_cols=332  Identities=9%  Similarity=-0.020  Sum_probs=222.8

Q ss_pred             ccCCCCCceeecCCCCCCcHHHHHHHHHHhh-hccCCCCccc-ccC------CCcHHHHHHHHHHHHHHHHHhCCCCCcE
Q 043610           64 QSGQEDRVFNFAAGPANLPEKVLLKAQSELY-NWRGSGMSVM-EMS------HRGKEFKSIIEKAESDLRALLNIPQEYS  135 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~-~~~~~g~s~~-~~~------~~~~~~~~~~~~~r~~la~l~g~~~~~~  135 (430)
                      +......+|+++++.++.|+.|+++|..... .+. .+.+.. ...      ..++.+.++.+++++.+++++|+++  +
T Consensus        75 ~~~~~~~~yld~aa~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~--~  151 (456)
T 2z67_A           75 LSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFC-HGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNV--H  151 (456)
T ss_dssp             HHTTBGGGCTTCEECSSCCCCCSCHHHHHHTTTCT-TCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCC--E
T ss_pred             HHhccccccccccccccccccccccccCccccccC-CCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCC--C
Confidence            4444556899999999999999999887432 221 111110 000      1123467888999999999999986  4


Q ss_pred             EEEEeCcHH-HHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-C--
Q 043610          136 VLFLQGGAT-TQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-N--  206 (430)
Q Consensus       136 vv~~~~gaT-~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~--  206 (430)
                      +++ ++|+| .++..++..+..  +|++|++....+.+.  .+.++..| +++.++....++.+ .+|+++|+  + +  
T Consensus       152 ~~~-t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~--~~~~~~~G~~~~~v~~~~~~~~~-~~d~~~l~~~i~~~~  227 (456)
T 2z67_A          152 AIA-TPISTGMSISLCLSAARKKYGSNVVIYPYASHKSP--IKAVSFVGMNMRLVETVLDGDRV-YVPVEDIENAIKKEI  227 (456)
T ss_dssp             EEE-ESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH--HHHHHHTTCEEEEECCEEETTEE-ECCHHHHHHHHHHHH
T ss_pred             EEE-eCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHH--HHHHHHcCCCceEEEEeccCCCC-CcCHHHHHHHHHHHh
Confidence            555 47788 455544554322  566677676655552  24555678 77777652100122 57888886  6 4  


Q ss_pred             --CCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc---CCCCccccc----cccEEEeCCCccc-cCCccE
Q 043610          207 --PDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN---FCSKPVDVT----RFGVIYAGAQKNV-GPSGVT  273 (430)
Q Consensus       207 --~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s---~G~~~idl~----~~d~~~~s~~K~~-gp~G~g  273 (430)
                        +++.+|++++++|+||.+.|  +|.++ +++|+++++|++++   +|..+.++.    ..|++++|+|||+ +|.|+|
T Consensus       228 ~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G  307 (456)
T 2z67_A          228 ELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGG  307 (456)
T ss_dssp             HTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCE
T ss_pred             hCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeE
Confidence              46778888889999999999  78886 68899999997654   444455442    3589999999997 699999


Q ss_pred             EEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-
Q 043610          274 IVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-  351 (430)
Q Consensus       274 ~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-  351 (430)
                      ++++ ++++++.+.+   .+..+        ..++    ...++..++..+.. .|++++.++..++++++++.|.+.. 
T Consensus       308 ~l~~~~~~~~~~l~~---~~~g~--------~~~~----~~~~~~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~~  371 (456)
T 2z67_A          308 LVYSTDAEFIKEISL---SYPGR--------ASAT----PVVNTLVSLLSMGS-KNYLELVKNQKNSKKLLDELLNDLSK  371 (456)
T ss_dssp             EEEESCHHHHHHHHT---TSCSC--------BCSH----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCHHHHhhcCc---CCCCC--------CCCC----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999 4677765532   22211        1112    24445556665543 4789999999999999999999753 


Q ss_pred             --CceecCCCCCCCccceEEEEc--CCCchhHHHHHHHHHcCC---eec------CC----CCCCCeeEEeecCCCCHHH
Q 043610          352 --GFYKCPVEKSVRSFMNVPFTL--EKSDLEAEFVKEAAKEKM---VQL------KG----HRSVGGMRASIYNAMPLAG  414 (430)
Q Consensus       352 --G~~~~~~~~~~rs~~iv~f~~--~~~~~~~~~~~~L~~~Gi---~~~------~g----~~~~g~iRis~~~~~t~ed  414 (430)
                        |+.+++  +.    .+++|.+  ++  ...++.++|.++|+   .+.      .|    ....+++|+|++.++|++|
T Consensus       372 ~~g~~v~~--~~----~~v~~~~~~~~--~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~ee  443 (456)
T 2z67_A          372 KTGGKFLD--VE----SPIASCISVNS--DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTED  443 (456)
T ss_dssp             HSSCCBCC--CC----CSSEEEEECSS--CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHH
T ss_pred             ccCCEecC--CC----CeEEEEEeccc--HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHH
Confidence              765543  22    2456666  43  22378888988875   232      01    1124689999999999999


Q ss_pred             HHHHHHHHHHHH
Q 043610          415 VEKLVAFMKDFQ  426 (430)
Q Consensus       415 v~~ll~~L~~~~  426 (430)
                      |++++++|++++
T Consensus       444 id~~l~~L~~~~  455 (456)
T 2z67_A          444 IVNSVSKLEKIL  455 (456)
T ss_dssp             HHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHh
Confidence            999999998764

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.93  E-value=1.3e-24  Score=219.56  Aligned_cols=330  Identities=13%  Similarity=0.035  Sum_probs=226.0

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLNIP--QEYSVLFLQGGA  143 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~ga  143 (430)
                      .+++|..|-  .+.++.|++++.+.+.+.. .+     ..+++.  ...+..+++.+.+++.+|.+  ++.+|++ ++|+
T Consensus        38 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~-----~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~-~~g~  110 (429)
T 1yiz_A           38 KPLNLGQGFPDYHAPKYALNALAAAANSPD-PL-----ANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLV-TVGA  110 (429)
T ss_dssp             CCEECCSSSCSSCCCHHHHHHHHHHHTCSC-GG-----GGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEE-ESHH
T ss_pred             CEEEecCCCCCCCCCHHHHHHHHHHHhccc-cC-----ccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEE-ecCh
Confidence            355555542  2468899999998875421 01     111111  12344445555566666853  3215666 4899


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc------CCCCCCccccc--cCCCccEEEE
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK------YTKIPNFDALE--QNPDAKYLHI  214 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~------~g~~~d~~~l~--i~~~~~lv~i  214 (430)
                      +++++.++..++++||+|++..+++.+..  ..++..| +++.++...+..      .+..+|+++++  +++++++|++
T Consensus       111 ~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~  188 (429)
T 1yiz_A          111 YEALYATIQGHVDEGDEVIIIEPFFDCYE--PMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIII  188 (429)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEE
Confidence            99999999999899999998888777643  3455667 777777643100      01236788887  7788999999


Q ss_pred             eecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCC------Ccc-ccc---cccEEEeCCCccccCCc--cEEEE
Q 043610          215 CANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS------KPV-DVT---RFGVIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       215 ~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~------~~i-dl~---~~d~~~~s~~K~~gp~G--~g~l~  276 (430)
                      ++++|+||.+++     +|.++ +++|+++|+|++|+...      .++ .+.   +.++++.|++|++|++|  +|+++
T Consensus       189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~  268 (429)
T 1yiz_A          189 NTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAY  268 (429)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEE
T ss_pred             CCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEE
Confidence            999999999998     34454 58899999999987421      122 222   23689999999999889  99999


Q ss_pred             EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY-----LLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~-----l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      +++++++.+...           .. ...++.+...+.++..+|+.     ......++.++++++++++++.+.|.+ .
T Consensus       269 ~~~~~~~~l~~~-----------~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~  335 (429)
T 1yiz_A          269 GPEALLKNLQMV-----------HQ-NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE-V  335 (429)
T ss_dssp             SCHHHHHHHHHH-----------HH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             eCHHHHHHHHHH-----------Hh-hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHh-C
Confidence            999887754210           00 11246677778888888876     211234788999999999999999987 4


Q ss_pred             CceecCCCCCCCccceEEEEcCCCc-----------hhH-HHHHHHH-HcCCeecCCCCC---------CCeeEEeecCC
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKSD-----------LEA-EFVKEAA-KEKMVQLKGHRS---------VGGMRASIYNA  409 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~-~~~~~L~-~~Gi~~~~g~~~---------~g~iRis~~~~  409 (430)
                      |+.+..  +  .....+.+.+++..           .+. ++.++|. ++||.+.+|...         .+++|||+.. 
T Consensus       336 g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~-  410 (429)
T 1yiz_A          336 GMNPTV--P--QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK-  410 (429)
T ss_dssp             TCEEEE--C--SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS-
T ss_pred             CCcccC--C--CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC-
Confidence            777653  1  12345667776420           233 6888775 789998775311         4589999984 


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 043610          410 MPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       410 ~t~edv~~ll~~L~~~~~  427 (430)
                       ++++|+++++.|+++++
T Consensus       411 -~~e~i~~~l~~l~~~l~  427 (429)
T 1yiz_A          411 -KDENLQKAAEILRKWKG  427 (429)
T ss_dssp             -CHHHHHHHHHHHHHHSC
T ss_pred             -CHHHHHHHHHHHHHhcc
Confidence             89999999999998764

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.93  E-value=1.9e-24  Score=222.36  Aligned_cols=341  Identities=11%  Similarity=-0.012  Sum_probs=226.6

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCc---------EEEE
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEY---------SVLF  138 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~---------~vv~  138 (430)
                      .++.+.+-+++...|..+.+.+...+.   .++.    .+..++...++.+++.+.+++++|.+.+.         ..++
T Consensus        78 ~p~~~~~~~~~~~~~~~~~~~~~~~~n---~~~~----~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~  150 (481)
T 4e1o_A           78 SPHMHAYYPALTSWPSLLGDMLADAIN---CLGF----TWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVL  150 (481)
T ss_dssp             STTBCSSSCCCCCHHHHHHHHHHHHHC---CCCS----STTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEE
T ss_pred             CCCeeEeCCCCCCHHHHHHHHHHHHhC---cccC----CcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEE
Confidence            456677777776666555555555442   1111    12346788888899999999999998532         4455


Q ss_pred             EeCcHHHHHHHHHhhcC-------------------CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCC
Q 043610          139 LQGGATTQFAAVPLNLC-------------------TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIP  198 (430)
Q Consensus       139 ~~~gaT~a~~~~~~sl~-------------------~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~  198 (430)
                       ++|||+++..++....                   .+++.|++....|++.  .+.++..| +++.++..+   . ..+
T Consensus       151 -~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~~~~~~g~~~~~v~~~~---~-~~~  223 (481)
T 4e1o_A          151 -QSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSV--EKAGLISLVKMKFLPVDD---N-FSL  223 (481)
T ss_dssp             -ESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHH--HHHHHHHTCEEEEECCCT---T-SCC
T ss_pred             -eCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHH--HHHHHhCCCceEEEEcCC---C-CcC
Confidence             5789999987766542                   1455666555666653  34444557 777887642   2 358


Q ss_pred             Cccccc--cCCC------ccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc--------ccccccEE
Q 043610          199 NFDALE--QNPD------AKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV--------DVTRFGVI  259 (430)
Q Consensus       199 d~~~l~--i~~~------~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--------dl~~~d~~  259 (430)
                      |+++|+  ++++      +.+|++++++|++|.+.|  +|+++ +++|++++||++++.+....        .++..|++
T Consensus       224 d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi  303 (481)
T 4e1o_A          224 RGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSF  303 (481)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEE
T ss_pred             CHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEE
Confidence            898887  5433      678999999999999988  78886 68999999999998764321        12334899


Q ss_pred             EeCCCcccc-CCccEEEEEcHHH-HhccCCCCCccccccch-----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610          260 YAGAQKNVG-PSGVTIVIVRKDL-LGNAQDKTPLMLDYKIH-----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV  332 (430)
Q Consensus       260 ~~s~~K~~g-p~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~-----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v  332 (430)
                      ++++|||++ |.|+|+++++++. +.......+.|+.....     .......++.+ +....+..+++.+.. .|++++
T Consensus       304 ~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~al~~~g~-~g~~~~  381 (481)
T 4e1o_A          304 TFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRR-FRSVKLWFVIRSFGV-KNLQAH  381 (481)
T ss_dssp             EECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCC-CTHHHHHHHHHHHHH-HHHHHH
T ss_pred             EEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCC-ccHHHHHHHHHHhHH-HHHHHH
Confidence            999999996 9999999998654 33322223333311100     00001112222 233455556665543 479999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-hhHHHHHHHHHcCCeec-CCC-CCCCeeEEeecCC
Q 043610          333 EKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-LEAEFVKEAAKEKMVQL-KGH-RSVGGMRASIYNA  409 (430)
Q Consensus       333 ~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-~~~~~~~~L~~~Gi~~~-~g~-~~~g~iRis~~~~  409 (430)
                      .++..++++++++.|++..|++++. ++  .. .+++|.+++.+ ...++.++|.++|++.. ++. .....+|+++.++
T Consensus       382 ~~~~~~~a~~l~~~L~~~~g~~~~~-~~--~~-~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~  457 (481)
T 4e1o_A          382 VRHGTEMAKYFESLVRNDPSFEIPA-KR--HL-GLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQ  457 (481)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEECCS-CC--CS-SEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCT
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEec-CC--ce-eEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCC
Confidence            9999999999999999866998863 22  23 47889886432 23378889988885533 221 1123699998875


Q ss_pred             -CCHHHHHHHHHHHHHHHHh
Q 043610          410 -MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       410 -~t~edv~~ll~~L~~~~~~  428 (430)
                       ++++||++++++|++++++
T Consensus       458 ~tt~~di~~~~~~i~~~~~~  477 (481)
T 4e1o_A          458 FTTRDDILRDWNLIRDAATL  477 (481)
T ss_dssp             TCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence             4899999999999998764

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.93  E-value=6e-24  Score=219.45  Aligned_cols=340  Identities=11%  Similarity=-0.017  Sum_probs=223.0

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      ..|+.....++.++.+++++.....+.  +..    .+..++...++.+++++.+++++|.+++.+++|+ +|+|+++..
T Consensus       101 ~~yl~~~~~~~~~~~v~~~~~~~~~n~--~~~----~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t-~ggt~a~~~  173 (497)
T 2qma_A          101 PDCIAHLHTPPLMPAVAAEAMIAALNQ--SMD----SWDQASSATYVEQKVVNWLCDKYDLSEKADGIFT-SGGTQSNQM  173 (497)
T ss_dssp             TTBCSSSCCCCBHHHHHHHHHHHHHCC--CTT----CGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEE-SSHHHHHHH
T ss_pred             CCeeEeCCCCCcHHHHHHHHHHHhhcc--ccc----chhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEc-CCchHHHHH
Confidence            356666666789999999987765431  111    1223466777778889999999999753377765 789999998


Q ss_pred             HHhhc----C---------CC------CC-cEEEEeCChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc-
Q 043610          150 VPLNL----C---------TP------ND-PVDYIVTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE-  204 (430)
Q Consensus       150 ~~~sl----~---------~~------gd-~vl~~~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~-  204 (430)
                      ++...    +         .+      |+ .|++....+++.  .+.++..|    +++.++..+   . ..+|+++|+ 
T Consensus       174 al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~--~~~~~~~g~g~~~v~~v~~~~---~-~~~d~~~L~~  247 (497)
T 2qma_A          174 GLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTV--QKSASWMGLGEKAVMTVDANA---D-GTMDITKLDE  247 (497)
T ss_dssp             HHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHH--HHHHHHTTSCGGGEEEECBCT---T-SSBCGGGHHH
T ss_pred             HHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHH--HHHHHHcCCCcccEEEEecCC---C-CcCCHHHHHH
Confidence            87762    2         12      35 455444556653  23344443    356666532   2 257888887 


Q ss_pred             -cCC----Ccc--EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccc----c---ccccEEEeCCCccc
Q 043610          205 -QNP----DAK--YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD----V---TRFGVIYAGAQKNV  267 (430)
Q Consensus       205 -i~~----~~~--lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id----l---~~~d~~~~s~~K~~  267 (430)
                       +++    +++  +|++++++|+||.+.|  +|.++ +++|+++++|++|+.+..+.+    +   +..|++++++|||+
T Consensus       248 ~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l  327 (497)
T 2qma_A          248 VIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLF  327 (497)
T ss_dssp             HHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTT
T ss_pred             HHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhcc
Confidence             543    244  8899999999999988  78886 689999999999998876555    2   24489999999999


Q ss_pred             c-CCccEEEEEcHHH-HhccCCCCCccccccch----hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          268 G-PSGVTIVIVRKDL-LGNAQDKTPLMLDYKIH----DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       268 g-p~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~----~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      + |.|+|+++++++. ++.+.. .+.|+.....    .......++... ....+..+++.+. ..|++++.++..++++
T Consensus       328 ~~p~~~G~l~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~r~~-~al~~~~~l~~lg-~~g~~~~~~~~~~~a~  404 (497)
T 2qma_A          328 YQTISCGALLVNDKSNFKFLLH-HADYLNREHDELPNLVDKSIATTKRF-DALKVFMTMQNVG-PKALGDMYDHLLAQTL  404 (497)
T ss_dssp             CCCSSCEEEEESCGGGGGGGCC---------------------CCSCCC-THHHHHHHHHHTC-HHHHHHHHHHHHHHHH
T ss_pred             CCCcceEEEEEeCHHHHHHhcC-CchhcCCccccCCCccccCCCCCCch-hHHHHHHHHHHhC-HHHHHHHHHHHHHHHH
Confidence            5 8899999998654 443321 1222211000    000000011111 1123344566543 2478899999999999


Q ss_pred             HHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----hhHHHHHHHHHcCCeecCCCC--CCCeeEEee-cCCCCHH
Q 043610          342 LLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----LEAEFVKEAAKEKMVQLKGHR--SVGGMRASI-YNAMPLA  413 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~-~~~~t~e  413 (430)
                      ++++.|++..|++++. ++  +. .+++|.+.+.+     ...++.+.|.++|+.+..+..  ..+.+||++ +.+++++
T Consensus       405 ~l~~~L~~~~~~~~~~-~~--~~-~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~e  480 (497)
T 2qma_A          405 EVADMIRTNDQFELLA-EP--SL-STVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTS  480 (497)
T ss_dssp             HHHHHHHTCTTEEECS-CC--SS-SEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHH
T ss_pred             HHHHHHhhCCCeEEEc-CC--Cc-eEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHH
Confidence            9999999766888763 22  23 46888876422     122577778888988754321  124799998 7789999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 043610          414 GVEKLVAFMKDFQAKH  429 (430)
Q Consensus       414 dv~~ll~~L~~~~~~~  429 (430)
                      ||+++++.|++++++-
T Consensus       481 di~~~~~~l~~~~~~~  496 (497)
T 2qma_A          481 DFESLLSKINMLAVEL  496 (497)
T ss_dssp             HHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999988753

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.93  E-value=2e-24  Score=215.82  Aligned_cols=329  Identities=13%  Similarity=0.079  Sum_probs=220.9

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCc
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNI--PQEYSVLFLQGG  142 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~g  142 (430)
                      +++++|+.|-  .++++.|++++.+.+.+..   .+  ...+++  ....+..+++.+.+++.+|.  +++ +|+++ +|
T Consensus        35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~---~~--~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-~i~~~-~g  107 (398)
T 3ele_A           35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYD---SV--ALHGYTSAQGDVETRAAIAEFLNNTHGTHFNAD-NLYMT-MG  107 (398)
T ss_dssp             GGCEECCSCCCCSCCCHHHHHHHHHHHHHSC---HH--HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SS
T ss_pred             CCeEEeecCCCCCCCCHHHHHHHHHHHhcCC---cc--ccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChH-HEEEc-cC
Confidence            4566666653  2567899999998876411   00  011111  11234555666677777774  444 67765 78


Q ss_pred             HHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          143 ATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       143 aT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      ++++++.++..++++| |+|++..+++.+.  ...++..| +++.++..+   .+..+|+++++  +++++++|++++++
T Consensus       108 ~~~al~~~~~~l~~~g~d~vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~v~~~~p~  182 (398)
T 3ele_A          108 AAASLSICFRALTSDAYDEFITIAPYFPEY--KVFVNAAGARLVEVPADT---EHFQIDFDALEERINAHTRGVIINSPN  182 (398)
T ss_dssp             HHHHHHHHHHHHCCSTTCEEEEESSCCTHH--HHHHHHTTCEEEEECCCT---TTSSCCHHHHHHTCCTTEEEEEECSSC
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEeCCCchhh--HHHHHHcCCEEEEEecCC---cCCcCCHHHHHHHhCcCCCEEEEcCCC
Confidence            9999999999999999 9999888777664  34566678 777777643   13357888887  77899999999999


Q ss_pred             CCccccCC--CCc---cc-cC------CCcEEEEeccCcCCC-----Cccccccc--cEEEeCCCccccCCc--cEEEEE
Q 043610          219 TIHGVEFK--EYP---SA-KN------STGILVADMSSNFCS-----KPVDVTRF--GVIYAGAQKNVGPSG--VTIVIV  277 (430)
Q Consensus       219 t~tG~~~p--ei~---~~-~~------~g~~lvvD~a~s~G~-----~~idl~~~--d~~~~s~~K~~gp~G--~g~l~v  277 (430)
                      |+||.++|  ++.   ++ ++      +|+++++|++|+...     .+...+..  ++++.|++|++|++|  +|++++
T Consensus       183 nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  262 (398)
T 3ele_A          183 NPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLV  262 (398)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEEC
T ss_pred             CCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEE
Confidence            99999999  444   43 45      899999999987522     23222223  488999999999777  899999


Q ss_pred             cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecC
Q 043610          278 RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCP  357 (430)
Q Consensus       278 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~  357 (430)
                      ++++++...- ..   .+... .......+++...+.++..+++    ...   ..++++++++++++.|++ .|+.+..
T Consensus       263 ~~~~~~~~~~-~~---~~~~~-~~~~~~~~~~~~~~~a~~~~l~----~~~---~~~~~~~~~~~l~~~L~~-~g~~~~~  329 (398)
T 3ele_A          263 PDEVYDKAEL-YA---AVCGA-GRALGYVCAPSLFQKMIVKCQG----ATG---DINAYKENRDLLYEGLTR-IGYHCFK  329 (398)
T ss_dssp             CTTSTTHHHH-HH---HHHHH-HHHTTCCCSCHHHHHHHTTCTT----CCC---CHHHHHHHHHHHHHHHHH-HTCCEEC
T ss_pred             cchhhhHHHH-HH---HHHHH-hhhccccCCCHHHHHHHHHHhc----CHH---HHHHHHHHHHHHHHHHHH-cCCeecC
Confidence            8875432000 00   00000 0011123556666666555553    111   467788888999999987 4776653


Q ss_pred             CCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          358 VEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       358 ~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                        +  .....+.+.+++. ...++.+.|.++||.+.+|..  ..+++|||++  +++++++++++.|++++++.
T Consensus       330 --~--~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~~~  396 (398)
T 3ele_A          330 --P--DGAFYMFVKALED-DSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDREMIKHSMPAFEKIYKKY  396 (398)
T ss_dssp             --C--SBSSEEEEECSSS-CHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             --C--CeeEEEEEEcCCC-CHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence              1  2333356677642 233788899999999887643  2468999996  59999999999999988753

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.93  E-value=4.3e-24  Score=221.37  Aligned_cols=301  Identities=13%  Similarity=-0.000  Sum_probs=220.5

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCC--CcEE--EEEeCcHHHHHHHHHhhcCCCC--------CcEEEEeCChhHHHHHHHH
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQ--EYSV--LFLQGGATTQFAAVPLNLCTPN--------DPVDYIVTGSWGDKAFKEA  177 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~--~~~v--v~~~~gaT~a~~~~~~sl~~~g--------d~vl~~~~g~~~~~~~~~a  177 (430)
                      .+...++.+++++.+++++|.+.  + ++  +++ +|+|+++..++..+..+|        |+|++..+.+.+.  ...+
T Consensus       134 ~p~~~~le~~l~~~la~~~g~~~~~~-~v~~~~t-~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~--~~~~  209 (514)
T 3mad_A          134 WPSTAKFEAEVVAMTAHMLGGDAAGG-TVCGTVT-SGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAF--DKAA  209 (514)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTGGGGTS-CCEEEEE-SSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHH--HHHH
T ss_pred             ChHHHHHHHHHHHHHHHHcCCCCccC-CcceEEc-CcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHH--HHHH
Confidence            45666777788999999999973  2 44  664 789999999998886555        8888777766663  3456


Q ss_pred             HHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--
Q 043610          178 QKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--  249 (430)
Q Consensus       178 ~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--  249 (430)
                      +..| +++.++..+   .+ .+|+++|+  +++++++|++++++|+||.+.|  +|.++ +++|+++++|++|+.+..  
T Consensus       210 ~~~G~~v~~v~~~~---~~-~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~  285 (514)
T 3mad_A          210 QYFGIKLVRTPLDA---DY-RADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPW  285 (514)
T ss_dssp             HHHTCEEEEECBCT---TS-CBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHH
T ss_pred             HHcCCeeEEeeeCC---CC-CCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchh
Confidence            6678 877787643   22 57888887  7889999999999999999999  78886 689999999999875432  


Q ss_pred             ---------ccccc--cccEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccc-hhhcCCCCCCccHHHHHHH
Q 043610          250 ---------PVDVT--RFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKI-HDENNSLYNTPPCYCIYMC  316 (430)
Q Consensus       250 ---------~idl~--~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~T~~~~~~~a~  316 (430)
                               +++..  ..|++++++|||+ |+.|+|+++++++.+.......  ..+|.. ........|+++.....++
T Consensus       286 ~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~~~~~~~a~  363 (514)
T 3mad_A          286 AERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFI--AADWPGGLYFSPTFAGSRPGALSATA  363 (514)
T ss_dssp             HHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEE--ESSCTTCSEEESSSCSSCCHHHHHHH
T ss_pred             HHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhcccccc--ccccCCCcccCCccCCCCchHHHHHH
Confidence                     34433  3479999999996 6889999999887655421100  001110 0011223467777778888


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC
Q 043610          317 GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH  396 (430)
Q Consensus       317 ~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~  396 (430)
                      ..+++.+.. .+++++.++..++++++++.|++..|++++. .+   . .++.|..++. ...++.+.|.++||.+ .|.
T Consensus       364 ~aal~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~---~-~~~~~~~~~~-~~~~l~~~L~~~Gi~v-~g~  435 (514)
T 3mad_A          364 WAAMLSLGE-EGYLDATRRILQAADRLKAGVRAIPSLKILG-DP---L-WVIAVASDEL-NIYQVMEEMAGRGWRL-NGL  435 (514)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSTTCEESS-CC---S-SEEEEECSSS-CHHHHHHHHHTTTCBC-EEE
T ss_pred             HHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhhCCCeEEeC-CC---e-EEEEEeCCCC-CHHHHHHHHHhcCCEe-ccC
Confidence            888887764 4789999999999999999999866888763 22   2 3566766431 1237999999999987 444


Q ss_pred             CCCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610          397 RSVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       397 ~~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~  428 (430)
                      ...+.+|+++... +++++++++++.|++++++
T Consensus       436 ~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~  468 (514)
T 3mad_A          436 HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ  468 (514)
T ss_dssp             TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence            4456799999854 4679999999999988753

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.93  E-value=5.8e-25  Score=219.94  Aligned_cols=331  Identities=13%  Similarity=0.085  Sum_probs=222.9

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCC-CcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSH-RGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      .+++.++..++|+.|++++.+.+.+....|... .... ..+...++.+.+|+.+++++|.++  ..+++ ++||+++..
T Consensus        25 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~r~~la~~~g~~~--~~i~~-~sGt~a~~~  100 (405)
T 2vi8_A           25 KIELIASENFVSRAVMEAQGSVLTNKYAEGYPG-RRYYGGCEYVDIVEELARERAKQLFGAEH--ANVQP-HSGAQANMA  100 (405)
T ss_dssp             SEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSE--EECCC-SSHHHHHHH
T ss_pred             ceeeccCcccCCHHHHHHHHHHhhcccccCCCC-ccccccchHHHHHHHHHHHHHHHHhCCCc--eEEEe-cCcHHHHHH
Confidence            344446667779999999998875321111110 0111 124455566678999999999985  44444 456999999


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC---CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCc
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC---NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIH  221 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g---~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~t  221 (430)
                      ++..++++||+|++..+.+.+..  +.. ....|   ++..++..+   .+..+|+++++  +++ ++++|+++.  +..
T Consensus       101 a~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~---~~~~~d~~~l~~~i~~~~~~~v~~~~--~~~  174 (405)
T 2vi8_A          101 VYFTVLEHGDTVLGMNLSHGGHLTHGSP-VNFSGVQYNFVAYGVDP---ETHVIDYDDVREKARLHRPKLIVAAA--AAY  174 (405)
T ss_dssp             HHHHHCCTTCEEEEECGGGTCCTTTTCT-TSHHHHHSEEEEECBCT---TTCSBCHHHHHHHHHHHCCSEEEECC--SSC
T ss_pred             HHHHhcCCCCEEEEecccccchhcccch-hhhccceeEEEeccccc---ccCCcCHHHHHHHHHhcCCeEEEEeC--CCC
Confidence            99999999999998775543321  100 01112   333343321   12247888887  554 788888743  334


Q ss_pred             cccCC--CCccc-cCCCcEEEEeccCcCCCCccc-----cccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCcc
Q 043610          222 GVEFK--EYPSA-KNSTGILVADMSSNFCSKPVD-----VTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLM  292 (430)
Q Consensus       222 G~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-----l~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~  292 (430)
                      |...+  +|.++ +++|+++++|++|++|..+.+     +...|++++|+||++| |.| |++++++++++.+.+..   
T Consensus       175 ~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~~---  250 (405)
T 2vi8_A          175 PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKAI---  250 (405)
T ss_dssp             CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHHH---
T ss_pred             CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC-eEEEEcHHHHHHHHhhh---
Confidence            66666  67775 688999999999986543221     2245799999999996 999 99999988876543210   


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                              .....++++...+.++.++++.+.+ .+++++.++.+++++++++.|.+ .|+++... . ..+ ..+.+.+
T Consensus       251 --------~~~~~~~~~~~~~aa~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~-~~~-~~~~~~~  317 (405)
T 2vi8_A          251 --------FPGIQGGPLMHVIAAKAVAFGEALQ-DDFKAYAKRVVDNAKRLASALQN-EGFTLVSG-G-TDN-HLLLVDL  317 (405)
T ss_dssp             --------TTTTCSSCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGG-S-CSS-SEEEEEC
T ss_pred             --------cccccCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh-CCCeEecC-C-CCc-eEEEEEc
Confidence                    0112367778788888888887652 36889999999999999999997 48877631 1 123 3566777


Q ss_pred             CCCchhH-HHHHHHHHcCCeecCCC--------CCCCeeEEeecC----CCCHHHHHHHHHHHHHHHHh
Q 043610          373 EKSDLEA-EFVKEAAKEKMVQLKGH--------RSVGGMRASIYN----AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       373 ~~~~~~~-~~~~~L~~~Gi~~~~g~--------~~~g~iRis~~~----~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++.+.+. ++.+.|.++||.+.+|.        ...+++|||++.    .++++|+++++++|++++++
T Consensus       318 ~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~  386 (405)
T 2vi8_A          318 RPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN  386 (405)
T ss_dssp             GGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence            6322233 68888988999977643        113579999986    46799999999999998753

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.93  E-value=1.7e-24  Score=218.09  Aligned_cols=331  Identities=11%  Similarity=0.033  Sum_probs=227.2

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCc
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNIP--QEYSVLFLQGG  142 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~g  142 (430)
                      +.+++|+.|-  .++|+.|++++.+.+.+..    .   ..+++  ....+..+.+.+.+.+.+|.+  ++.+|+++ +|
T Consensus        28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~----~---~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~-~g   99 (422)
T 3fvs_A           28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDF----M---LNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVT-VG   99 (422)
T ss_dssp             SCCEECCCSSCSSCCCHHHHHHHHHHHHSCG----G---GGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEE-SH
T ss_pred             CCceEeCCCCCCCCCCHHHHHHHHHHHhCCC----c---cCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEE-CC
Confidence            3566776655  3578999999998876411    0   11111  122344556666666666654  31267765 89


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCC----CC----cCCCCCCccccc--cCCCccE
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGK----AE----KYTKIPNFDALE--QNPDAKY  211 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~----~~----~~g~~~d~~~l~--i~~~~~l  211 (430)
                      ++++++.++..++++||+|++..+.+.+..  ..++..| +++.++...    +.    ..+..+|+++++  +++++++
T Consensus       100 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~  177 (422)
T 3fvs_A          100 GYGALFTAFQALVDEGDEVIIIEPFFDCYE--PMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKA  177 (422)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEE
T ss_pred             hHHHHHHHHHHHcCCCCEEEEcCCCchhhH--HHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceE
Confidence            999999999999999999999888876643  4556677 777777643    00    012246778887  6789999


Q ss_pred             EEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcC----CCCccccccc------cEEEeCCCccccCCc--cE
Q 043610          212 LHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNF----CSKPVDVTRF------GVIYAGAQKNVGPSG--VT  273 (430)
Q Consensus       212 v~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~----G~~~idl~~~------d~~~~s~~K~~gp~G--~g  273 (430)
                      |++++++|+||.+++     +|.++ +++|+++++|++|+.    |..+.++..+      .+++.|++|++|++|  +|
T Consensus       178 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G  257 (422)
T 3fvs_A          178 LVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVG  257 (422)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCE
T ss_pred             EEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEE
Confidence            999999999999997     34554 588999999999875    3233333222      378899999999778  89


Q ss_pred             EEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          274 IVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL-----ELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       274 ~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~-----~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      ++++++++++.+..       .    .. ...++++...++++..+|+...     ....++.+.++++++++++++.|.
T Consensus       258 ~~~~~~~~~~~~~~-------~----~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~  325 (422)
T 3fvs_A          258 WVLGPDHIMKHLRT-------V----HQ-NSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQ  325 (422)
T ss_dssp             EEECCHHHHHHHHH-------H----HH-TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCHHHHHHHHH-------H----Hh-hccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999988775421       0    00 1224667788888888887411     123578899999999999999999


Q ss_pred             ccCCceecCCCCCCCccceEEEEcCCCch-------------hHHHHHHH-HHcCCeecCCCC---------CCCeeEEe
Q 043610          349 GSNGFYKCPVEKSVRSFMNVPFTLEKSDL-------------EAEFVKEA-AKEKMVQLKGHR---------SVGGMRAS  405 (430)
Q Consensus       349 ~~~G~~~~~~~~~~rs~~iv~f~~~~~~~-------------~~~~~~~L-~~~Gi~~~~g~~---------~~g~iRis  405 (430)
                      + .|+.+..  + . ....+.+.++....             ..++...| +++||.+.+|..         ..+++|||
T Consensus       326 ~-~g~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis  400 (422)
T 3fvs_A          326 S-VGLKPII--P-Q-GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFC  400 (422)
T ss_dssp             T-TTCEEEB--C-S-BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEE
T ss_pred             H-cCCeecC--C-C-eeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEE
Confidence            7 5887653  1 1 22234444432000             23677765 567999877542         14689999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHHh
Q 043610          406 IYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       406 ~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +..  ++++++++++.|++++++
T Consensus       401 ~~~--~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          401 FVK--DEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             CCC--CHHHHHHHHHHHHHHHHC
T ss_pred             ecC--CHHHHHHHHHHHHHHHhh
Confidence            886  999999999999998764

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.93  E-value=1.1e-24  Score=221.95  Aligned_cols=327  Identities=14%  Similarity=0.091  Sum_probs=224.9

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEEeC
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLNI--PQEYSVLFLQG  141 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~  141 (430)
                      .+++++|+.|-  .+.|+.|++++.+.+.+.   +     ..++++  ...++.+++.+.+++.+|.  +++ +|+++ +
T Consensus        56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~---~-----~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~-~v~~t-~  125 (447)
T 3b46_A           56 GRELINLGQGFFSYSPPQFAIKEAQKALDIP---M-----VNQYSPTRGRPSLINSLIKLYSPIYNTELKAE-NVTVT-T  125 (447)
T ss_dssp             TSCCEECCCCSCSSCCCHHHHHHHHHHTTSG---G-----GGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGG-GEEEE-S
T ss_pred             CCCeEEccCCCCCCCCCHHHHHHHHHHHhCc---C-----CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChh-hEEEe-C
Confidence            45678887774  346789999998887531   1     112211  1223333444444444564  344 67664 8


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCC--------cCCCCCCccccc--cCCCcc
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAE--------KYTKIPNFDALE--QNPDAK  210 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~--------~~g~~~d~~~l~--i~~~~~  210 (430)
                      |+++|+..++.+++++||+|++..+.+.+..  ..++..| +++.++...+.        ..+..+|+++|+  ++++++
T Consensus       126 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  203 (447)
T 3b46_A          126 GANEGILSCLMGLLNAGDEVIVFEPFFDQYI--PNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTK  203 (447)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEE
T ss_pred             CHHHHHHHHHHHHcCCCCEEEEeCCCchhHH--HHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCe
Confidence            8999999999999999999999887776642  3456677 77777764310        001246788887  678899


Q ss_pred             EEEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCC-----cc-cc----ccccEEEeCCCccccCCc--c
Q 043610          211 YLHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSK-----PV-DV----TRFGVIYAGAQKNVGPSG--V  272 (430)
Q Consensus       211 lv~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~-----~i-dl----~~~d~~~~s~~K~~gp~G--~  272 (430)
                      +|++++++|+||.+++     +|.++ +++|+++++|++|+....     ++ .+    .+.++++.|++|++|++|  +
T Consensus       204 ~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~ri  283 (447)
T 3b46_A          204 AVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRI  283 (447)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCC
T ss_pred             EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhh
Confidence            9999999999999987     35554 589999999999875321     21 12    123589999999999889  9


Q ss_pred             EEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          273 TIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       273 g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      |++++ ++++++.+..       ..   .  ...++.+.+.++++..+|+....+..++.++++++++++++.+.|.+ .
T Consensus       284 G~~~~~~~~l~~~l~~-------~~---~--~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~  350 (447)
T 3b46_A          284 GWVLSLNAELLSYAAK-------AH---T--RICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDE-L  350 (447)
T ss_dssp             EEEECSCHHHHHHHHH-------HH---H--HHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             EEEEeCCHHHHHHHHH-------HH---h--hccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHH-C
Confidence            99999 8888775421       00   0  01235677788888888886533345788999999999999999997 4


Q ss_pred             CceecCCCCCCCccceEEEEcCCC--------------chhH-HHHHHHH-HcCCeecCCCCC---------CCeeEEee
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKS--------------DLEA-EFVKEAA-KEKMVQLKGHRS---------VGGMRASI  406 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~--------------~~~~-~~~~~L~-~~Gi~~~~g~~~---------~g~iRis~  406 (430)
                      |+.+..  +  .....+.+.+++.              ..+. ++.++|. ++||.+.+|...         .+++|||+
T Consensus       351 g~~~~~--~--~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~  426 (447)
T 3b46_A          351 GLPYTA--P--EGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAV  426 (447)
T ss_dssp             TCCEEC--C--SBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEEC
T ss_pred             CCeecC--C--CeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEE
Confidence            776642  1  1223345566531              1233 7888875 579998776321         46899999


Q ss_pred             cCCCCHHHHHHHHHHHHHH
Q 043610          407 YNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       407 ~~~~t~edv~~ll~~L~~~  425 (430)
                      ..  ++++++++++.|+++
T Consensus       427 ~~--~~e~l~~~~~~l~~~  443 (447)
T 3b46_A          427 CK--DDAYLENAVERLKLL  443 (447)
T ss_dssp             CS--CHHHHHHHHHHGGGG
T ss_pred             eC--CHHHHHHHHHHHHHH
Confidence            85  899999999999874

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.93  E-value=6.1e-25  Score=220.95  Aligned_cols=326  Identities=14%  Similarity=0.063  Sum_probs=222.3

Q ss_pred             ceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHHHH
Q 043610           71 VFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGATTQ  146 (430)
Q Consensus        71 ~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT~a  146 (430)
                      .++|..|-  .+.++.+++++.+.+.+.    ...|..   .....+..+++.+.+.+.+|.+  ++++|+++ +|++++
T Consensus        27 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~~~y~~---~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t-~g~~~a   98 (411)
T 2o0r_A           27 AVNLGQGFPDEDGPPKMLQAAQDAIAGG----VNQYPP---GPGSAPLRRAIAAQRRRHFGVDYDPETEVLVT-VGATEA   98 (411)
T ss_dssp             CEESSCSSCSSCCCHHHHHHHHHHHHTT----CCSCCC---TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEE-EHHHHH
T ss_pred             eeeccCcCCCCCCCHHHHHHHHHHHhcC----CCCCCC---CCCCHHHHHHHHHHHHHHcCCCCCCCceEEEe-CCHHHH
Confidence            45554443  246789999999888641    111111   1112344445556666666853  32157765 789999


Q ss_pred             HHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccc
Q 043610          147 FAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~  223 (430)
                      +..++..++++||+|++..+.+.+..  ..++..| +++.++...+ ..+..+|+++++  +++++++|++++++|+||.
T Consensus        99 l~~~~~~~~~~gd~Vl~~~~~y~~~~--~~~~~~g~~~~~v~~~~~-~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~  175 (411)
T 2o0r_A           99 IAAAVLGLVEPGSEVLLIEPFYDSYS--PVVAMAGAHRVTVPLVPD-GRGFALDADALRRAVTPRTRALIINSPHNPTGA  175 (411)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEEE-TTEEECCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred             HHHHHHHhcCCCCEEEEeCCCcHhHH--HHHHHcCCEEEEeecccc-ccCCCCCHHHHHHhhccCceEEEEeCCCCCCCC
Confidence            99999999899999999888877643  3456677 7777776421 012237888887  7788999999999999999


Q ss_pred             cCC-----CCccc-cCCCcEEEEeccCcCCCC----cccc------ccccEEEeCCCccccCCc--cEEEEEcHHHHhcc
Q 043610          224 EFK-----EYPSA-KNSTGILVADMSSNFCSK----PVDV------TRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNA  285 (430)
Q Consensus       224 ~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~idl------~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~  285 (430)
                      ++|     +|.++ +++|+++++|++|+.+..    +.++      ...|+++.|++|++|++|  +|++++++++++.+
T Consensus       176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l  255 (411)
T 2o0r_A          176 VLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGV  255 (411)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHH
Confidence            998     34444 589999999999986432    2222      223689999999999889  99999999887754


Q ss_pred             CCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610          286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF  365 (430)
Q Consensus       286 ~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~  365 (430)
                      ....    .+        ..++.+...++++..+|+...  ..++.+.++++++++++++.|++ .|+.+..  +  .+.
T Consensus       256 ~~~~----~~--------~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~g  316 (411)
T 2o0r_A          256 RAAK----QY--------LSYVGGAPFQPAVALALDTED--AWVAALRNSLRARRDRLAAGLTE-IGFAVHD--S--YGT  316 (411)
T ss_dssp             HHHH----HH--------HTSCCCTTHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHH-HTCEECC--C--CBS
T ss_pred             HHHH----hh--------ccCCCChHHHHHHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHH-cCCEecC--C--Cee
Confidence            2200    00        112445556677777787532  25788899999999999999987 4887653  2  133


Q ss_pred             ceEEEEcCCC-ch-hHHHHHHHH-HcCCeecCCCC---------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          366 MNVPFTLEKS-DL-EAEFVKEAA-KEKMVQLKGHR---------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       366 ~iv~f~~~~~-~~-~~~~~~~L~-~~Gi~~~~g~~---------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ..+.+.+++. +. ..++.++|. ++||.+.+|..               ..+++|||++.  +++|++++++.|+++++
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~~~~l~~~~~  394 (411)
T 2o0r_A          317 YFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK--RDDTLDEAIRRLSVLAE  394 (411)
T ss_dssp             SEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS--CHHHHHHHHHHHGGGGC
T ss_pred             EEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence            3566777631 02 236888775 67999866421               13579999974  89999999999998765


Q ss_pred             h
Q 043610          428 K  428 (430)
Q Consensus       428 ~  428 (430)
                      +
T Consensus       395 ~  395 (411)
T 2o0r_A          395 R  395 (411)
T ss_dssp             -
T ss_pred             c
Confidence            4

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.93  E-value=3.6e-24  Score=212.23  Aligned_cols=314  Identities=11%  Similarity=0.055  Sum_probs=219.6

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~  145 (430)
                      ++++|+.|-  .+.|+.|++++.+.+.....-+     .   .....+..+++.+.+++.+|.  +++ +|+++ +|+++
T Consensus        24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~-----~---~~g~~~lr~~la~~l~~~~g~~~~~~-~i~~t-~g~~~   93 (376)
T 3ezs_A           24 RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYP-----K---SAFEESLRAAQRGFFKRRFKIELKEN-ELIST-LGSRE   93 (376)
T ss_dssp             CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCC-----C---TTCCHHHHHHHHHHHHHHHSCCCCGG-GEEEE-SSSHH
T ss_pred             CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCC-----C---CCCCHHHHHHHHHHHHHHhCCCCCHH-HEEEC-cCcHH
Confidence            556665543  4578899999988763211100     0   111234455666666667787  444 67765 78999


Q ss_pred             HHHHHHhhcCCC--CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          146 QFAAVPLNLCTP--NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       146 a~~~~~~sl~~~--gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      +++.++..+.++  ||+|++..+++.+.  ...++..| +++.++...+  .+  .++ +++  +.+++++|++++++|+
T Consensus        94 al~~~~~~~~~~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~--~~--~~~-~l~~~~~~~~~~v~~~~p~np  166 (376)
T 3ezs_A           94 VLFNFPSFVLFDYQNPTIAYPNPFYQIY--EGAAKFIKAKSLLMPLTKE--ND--FTP-SLNEKELQEVDLVILNSPNNP  166 (376)
T ss_dssp             HHHHHHHHHTTTCSSCEEEEEESCCTHH--HHHHHHTTCEEEEEECCGG--GT--SCC-CCCHHHHHHCSEEEECSSCTT
T ss_pred             HHHHHHHHHcCCCCCCEEEEecCCcHhH--HHHHHHcCCEEEEcccCCC--CC--cch-hHHhhhccCCCEEEEcCCCCC
Confidence            999999999999  99999888887764  34566677 8888877532  12  333 554  5678999999999999


Q ss_pred             ccccCC--CCc---cc-cCCCcEEEEeccCcCCCC---ccccc---------cc--cEEEeCCCccccCCc--cEEEEEc
Q 043610          221 HGVEFK--EYP---SA-KNSTGILVADMSSNFCSK---PVDVT---------RF--GVIYAGAQKNVGPSG--VTIVIVR  278 (430)
Q Consensus       221 tG~~~p--ei~---~~-~~~g~~lvvD~a~s~G~~---~idl~---------~~--d~~~~s~~K~~gp~G--~g~l~v~  278 (430)
                      ||.++|  ++.   ++ +++|+++++|++|+....   +..+.         ..  ++++.|++|++|++|  +|+++.+
T Consensus       167 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~  246 (376)
T 3ezs_A          167 TGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGD  246 (376)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEEC
T ss_pred             cCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeC
Confidence            999999  444   43 588999999999885432   22221         22  488999999998777  8999999


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV  358 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~  358 (430)
                      +++++.+..       .     .....+++|...+.++..+++..   ..++.+.++++++++++.+.|+   |+. .+ 
T Consensus       247 ~~~~~~~~~-------~-----~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~---~~~-~~-  306 (376)
T 3ezs_A          247 SRLLEKYKA-------F-----RAYLGYTSANAIQKASEAAWLDD---RHAEFFRNIYANNLKLARKIFK---NTL-IY-  306 (376)
T ss_dssp             HHHHHHHHH-------H-----HTTTCCCCCHHHHHHHHHHHHCS---HHHHHHHHHHHHHHHHHHHHST---TCC-CC-
T ss_pred             HHHHHHHHH-------H-----HhhhcCCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHhc---CCC-CC-
Confidence            988776421       0     01123477888888888888742   2468888999999999999886   443 11 


Q ss_pred             CCCCCccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                          .....+.+.+++   ..++.+.|.+ +||.+.+|..      ..+++|||++.  +++|++++++.|+++++++
T Consensus       307 ----~~~~~~~~~~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~~  375 (376)
T 3ezs_A          307 ----PYSFYVYLPVQN---GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY--DTPLLEKPLEIIETYRENH  375 (376)
T ss_dssp             ----SBSSEEEEECSC---HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS--CHHHHHHHHHHHHHHHCC-
T ss_pred             ----CcceEEEEECCC---HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHhc
Confidence                122345566652   3478888877 8999876531      24589999985  9999999999999998765

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.93  E-value=6.9e-24  Score=208.85  Aligned_cols=310  Identities=11%  Similarity=0.063  Sum_probs=222.8

Q ss_pred             CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      ..+++++|+.|.  .++|+.|++++.+.+.+...          +..   ....++|+.++++++++++ +++++ +|+|
T Consensus        24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~----------y~~---~~~~~l~~~la~~~~~~~~-~i~~~-~g~t   88 (361)
T 3ftb_A           24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGV----------YPD---VNYRRLNKSIENYLKLKDI-GIVLG-NGAS   88 (361)
T ss_dssp             ----CEETTCCCCTTCSCHHHHTTHHHHHHGGGS----------CCC---TTCHHHHHHHHHHHTCCSC-EEEEE-SSHH
T ss_pred             CCCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcC----------CCC---ccHHHHHHHHHHHhCCCcc-eEEEc-CCHH
Confidence            345677777663  45789999999988764211          111   1135788999999998775 77765 8899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      ++++.++..+    |+|++..+.+.+.  ...++..| +++.++..+   .+ ..++++++  +++ +++|++++++|+|
T Consensus        89 ~al~~~~~~~----d~vi~~~~~~~~~--~~~~~~~g~~~~~~~~~~---~~-~~~~~~l~~~l~~-~~~v~i~~p~npt  157 (361)
T 3ftb_A           89 EIIELSISLF----EKILIIVPSYAEY--EINAKKHGVSVVFSYLDE---NM-CIDYEDIISKIDD-VDSVIIGNPNNPN  157 (361)
T ss_dssp             HHHHHHHTTC----SEEEEEESCCTHH--HHHHHHTTCEEEEEECCT---TS-CCCHHHHHHHTTT-CSEEEEETTBTTT
T ss_pred             HHHHHHHHHc----CcEEEecCChHHH--HHHHHHcCCeEEEeecCc---cc-CCCHHHHHHhccC-CCEEEEeCCCCCC
Confidence            9999998887    8999888777664  34566678 888887753   12 35667776  666 9999999999999


Q ss_pred             cccCC--CCcc---c-cCCCcEEEEeccCcCCCCc-----ccc-ccc--cEEEeCCCccccCCc--cEEEE-EcHHHHhc
Q 043610          222 GVEFK--EYPS---A-KNSTGILVADMSSNFCSKP-----VDV-TRF--GVIYAGAQKNVGPSG--VTIVI-VRKDLLGN  284 (430)
Q Consensus       222 G~~~p--ei~~---~-~~~g~~lvvD~a~s~G~~~-----idl-~~~--d~~~~s~~K~~gp~G--~g~l~-v~~~~~~~  284 (430)
                      |.++|  ++.+   + +++|+++++|++|+.+...     ... ...  .+++.|++|++|++|  +|+++ .++++++.
T Consensus       158 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~  237 (361)
T 3ftb_A          158 GGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAK  237 (361)
T ss_dssp             TBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHH
Confidence            99999  4444   3 4899999999998744331     111 112  277889999999777  68888 67888776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCce-ecCCCCCCC
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFY-KCPVEKSVR  363 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~-~~~~~~~~r  363 (430)
                      +...              ...+++|...++++..+|+..   ..++.+.++++++++++++.|++..|+. +.+  +  .
T Consensus       238 ~~~~--------------~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~--~  296 (361)
T 3ftb_A          238 IKAK--------------QNPWNINCFAEMAAINCLKDT---NYIEESLLWIKKERKRFIEELNKIGFIKRVFS--P--H  296 (361)
T ss_dssp             HHTT--------------SCTTCSCHHHHHHHHHTSSCH---HHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEC--C--S
T ss_pred             HHhh--------------CCCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHhCCCCceecC--C--C
Confidence            4321              112477888888888888742   2578899999999999999999755776 543  1  2


Q ss_pred             ccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          364 SFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      + ..+.+.+++ ....++.+.|.++||.+.+|..    ..+++|||++   +.+|+++++++|+++.+.
T Consensus       297 ~-~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~  360 (361)
T 3ftb_A          297 A-NFVLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVENN  360 (361)
T ss_dssp             S-SEEEEEESS-SCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred             C-eEEEEEcCC-CCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence            2 345677764 2233799999999999877642    2468999987   899999999999988753

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.93  E-value=4.2e-25  Score=221.01  Aligned_cols=323  Identities=15%  Similarity=0.125  Sum_probs=222.2

Q ss_pred             CCceeecCCCC----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGPA----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp~----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      +.+++|+.|-.    ..++.+++++.+.+.+...      ....+...  ....++|+.+++++|.+++ +|+++ +|++
T Consensus        32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~------~~~~y~~~--~~~~~l~~~la~~~g~~~~-~v~~~-~g~~  101 (397)
T 2zyj_A           32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGE------VALQYSPT--EGYAPLRAFVAEWIGVRPE-EVLIT-TGSQ  101 (397)
T ss_dssp             TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHH------HHTSCCCT--TCCHHHHHHHHHHHTSCGG-GEEEE-SHHH
T ss_pred             CCceecCCCCCCchhCCHHHHHHHHHHHHHhcch------hhhCCCCC--CCCHHHHHHHHHHhCCChh-hEEEe-ccHH
Confidence            45667766532    2567899998887754110      01111111  1234788899999998665 67764 8999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEE-EEeecCC
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYL-HICANET  219 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv-~i~~~~t  219 (430)
                      ++++.++.++.++||+|++..+++.+..  ..++..| +++.++..+   .+  +|+++++  +++ ++++| ++++++|
T Consensus       102 ~al~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~---~~--~d~~~l~~~l~~~~~~~v~~~~~~~n  174 (397)
T 2zyj_A          102 QALDLVGKVFLDEGSPVLLEAPSYMGAI--QAFRLQGPRFLTVPAGE---EG--PDLDALEEVLKRERPRFLYLIPSFQN  174 (397)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHTTCCEEEEEEEET---TE--ECHHHHHHHHHHCCCSCEEECCBSCT
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCcHHHH--HHHHHcCCEEEecCcCC---CC--CCHHHHHHHHhhcCCeEEEECCCCcC
Confidence            9999999999899999998887776643  3455677 777776632   22  6788886  554 78887 5789999


Q ss_pred             CccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cccccccc------c--EEEeCCCccccCCc--cEEEEEcH
Q 043610          220 IHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTRF------G--VIYAGAQKNVGPSG--VTIVIVRK  279 (430)
Q Consensus       220 ~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~~------d--~~~~s~~K~~gp~G--~g~l~v~~  279 (430)
                      +||.++|  +   |.++ +++|+++++|++|+.+.    .+.++..+      +  +++.|+||++| +|  +|++++++
T Consensus       175 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~  253 (397)
T 2zyj_A          175 PTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHP  253 (397)
T ss_dssp             TTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCH
T ss_pred             CCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCH
Confidence            9999999  3   4444 58899999999998643    22333332      2  78899999999 66  79999999


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-C-CceecC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-N-GFYKCP  357 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~-G~~~~~  357 (430)
                      ++++.+.....           ....++ |...+.++..+|+.... ..++++.++++++++++.+.|++. . |+.+..
T Consensus       254 ~~~~~l~~~~~-----------~~~~~~-~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~  320 (397)
T 2zyj_A          254 EALQKLVQAKQ-----------GADLHT-PMLNQMLVHELLKEGFS-ERLERVRRVYREKAQAMLHALDREVPKEVRYTR  320 (397)
T ss_dssp             HHHHHHHHHHH-----------HHHSSC-CHHHHHHHHHHHTTTHH-HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECC
T ss_pred             HHHHHHHHHHH-----------hhcCCC-CHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEcc
Confidence            88776432000           001123 66677777777753210 236788888999999999999863 3 676642


Q ss_pred             CCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          358 VEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       358 ~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                        + ..+ ..+.+.+++ +.+. ++.+.|.++||.+.+|..      ..+++|||++.. +++|++++++.|++++++
T Consensus       321 --~-~~g-~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~  392 (397)
T 2zyj_A          321 --P-KGG-MFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRLGRALKG  392 (397)
T ss_dssp             --C-SBS-SEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred             --C-Ccc-EEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHH
Confidence              1 122 345677764 2233 799999989999877532      245799999875 899999999999988764

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.93  E-value=5.8e-24  Score=212.21  Aligned_cols=322  Identities=10%  Similarity=0.031  Sum_probs=224.1

Q ss_pred             CCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC---CCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP---QEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~---~~~~vv~~~~  141 (430)
                      ..+++++|+.|-  .+.|+.|++++.+.+....+-+.        .....+..+++.+.+++.+|.+   ++.+|+++ +
T Consensus        28 ~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~--------~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t-~   98 (396)
T 3jtx_A           28 EGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPL--------TAGLPELRQACANWLKRRYDGLTVDADNEILPV-L   98 (396)
T ss_dssp             TTCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCC--------TTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEE-S
T ss_pred             cCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCC--------CCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEc-C
Confidence            345677776654  45788999999987753221110        1112344556667777777853   43257664 8


Q ss_pred             cHHHHHHHHHhhcCCCC-----CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEE
Q 043610          142 GATTQFAAVPLNLCTPN-----DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLH  213 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~g-----d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~  213 (430)
                      |++++++.++..++++|     |+|++..+.+.+..  ..++..| +++.++..+   .+..+|+++++  +.+++++|+
T Consensus        99 g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~---~g~~~d~~~l~~~~~~~~~~v~  173 (396)
T 3jtx_A           99 GSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE--GATLLGGGEIHFANCPA---PSFNPDWRSISEEVWKRTKLVF  173 (396)
T ss_dssp             SHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHH--HHHHHTTCEEEEEECCT---TTCCCCGGGSCHHHHHTEEEEE
T ss_pred             CcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHH--HHHHHcCCEEEEeecCC---CCCccCHHHHHHhhccCcEEEE
Confidence            89999999999998886     68888777765542  3566678 888887732   34457888887  677899999


Q ss_pred             EeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccccc----------ccccEEEeCCCccccCCc--
Q 043610          214 ICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDV----------TRFGVIYAGAQKNVGPSG--  271 (430)
Q Consensus       214 i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl----------~~~d~~~~s~~K~~gp~G--  271 (430)
                      +++++|+||.+++  +   |.++ +++|+++++|++|+...    .++..          .+.++++.|++|.+|++|  
T Consensus       174 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (396)
T 3jtx_A          174 VCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLR  253 (396)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGC
T ss_pred             EECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccc
Confidence            9999999999999  4   5554 58899999999987532    23221          122488999999988667  


Q ss_pred             cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      +|+++.++++++.+...    ..        ...+++|...++++..+++.   ...++.++++++++++.+.+.|.+. 
T Consensus       254 ~G~~~~~~~~~~~~~~~----~~--------~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~l~~~l~~~-  317 (396)
T 3jtx_A          254 SGFVAGDAELLKNFLLY----RT--------YHGSAMSIPVQRASIAAWDD---EQHVIDNRRLYQEKFERVIPILQQV-  317 (396)
T ss_dssp             CEEEEECHHHHHHHHHH----HH--------HHTCCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred             eEEEEeCHHHHHHHHHH----Hh--------hcccCCCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            89999998887764320    00        11246788888888888864   2357888999999999999999863 


Q ss_pred             CceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~  420 (430)
                       +.+.  .+  .....+.+.+++ ....++.+.| +++||.+.+|..          ..+++|||++.  ++++++++++
T Consensus       318 -~~~~--~~--~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~i~~~l~  389 (396)
T 3jtx_A          318 -FDVK--LP--DASFYIWLKVPD-GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVATCVKAAE  389 (396)
T ss_dssp             -SCCC--CC--SSSSEEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHHHHHHHH
T ss_pred             -CCcc--CC--CeeEEEEEECCC-CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHHHHHHHH
Confidence             3322  11  233455667764 2234788888 557999876531          23589999986  8999999999


Q ss_pred             HHHHHH
Q 043610          421 FMKDFQ  426 (430)
Q Consensus       421 ~L~~~~  426 (430)
                      .|++++
T Consensus       390 ~l~~~l  395 (396)
T 3jtx_A          390 DIVSLY  395 (396)
T ss_dssp             HHHHHC
T ss_pred             HHHHHh
Confidence            998864

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.93  E-value=5e-24  Score=214.21  Aligned_cols=322  Identities=12%  Similarity=0.067  Sum_probs=217.8

Q ss_pred             CCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHH
Q 043610           69 DRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGAT  144 (430)
Q Consensus        69 ~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT  144 (430)
                      +.++.|+.|-.  +.++.+++++ +.+.+    +...|..   .....+..+.+.+.+.+.+|  .+++ +++++ +|+|
T Consensus        43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~----~~~~y~~---~~g~~~l~~~la~~~~~~~g~~~~~~-~v~~~-~g~t  112 (409)
T 2gb3_A           43 VRIHHLNIGQPDLKTPEVFFERI-YENKP----EVVYYSH---SAGIWELREAFASYYKRRQRVDVKPE-NVLVT-NGGS  112 (409)
T ss_dssp             CEEEECSSCCCCSCCCTHHHHHH-HHTCC----SSCCCCC---TTCCHHHHHHHHHHHHHTSCCCCCGG-GEEEE-SHHH
T ss_pred             CCEEeccCCCCCCCCCHHHHHHH-HHHhc----CCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCHH-HEEEe-CCHH
Confidence            44555555432  4678899999 77642    1111111   11122223333344433344  3344 67765 8999


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      +|++.++..++++||+|++..+.+.+..  ..++..| +++.++..++  .+..+ +++|+  +++++++|++++++|+|
T Consensus       113 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~-~~~l~~~l~~~~~~v~~~~p~npt  187 (409)
T 2gb3_A          113 EAILFSFAVIANPGDEILVLEPFYANYN--AFAKIAGVKLIPVTRRME--EGFAI-PQNLESFINERTKGIVLSNPCNPT  187 (409)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHHTCEEEEEECCGG--GTSCC-CTTGGGGCCTTEEEEEEESSCTTT
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCchhHH--HHHHHcCCEEEEeccCCC--CCCcc-HHHHHHhhCcCCeEEEECCCCCCC
Confidence            9999999999899999998888876642  3455677 7777776431  12123 67776  67789999999999999


Q ss_pred             cccCC-----CCccc-cCCCcEEEEeccCcCCCC---ccc-cc---cccEEEeCCCccccCCc--cEEEEEcH-HHHhcc
Q 043610          222 GVEFK-----EYPSA-KNSTGILVADMSSNFCSK---PVD-VT---RFGVIYAGAQKNVGPSG--VTIVIVRK-DLLGNA  285 (430)
Q Consensus       222 G~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~---~id-l~---~~d~~~~s~~K~~gp~G--~g~l~v~~-~~~~~~  285 (430)
                      |.+++     +|.++ +++|+++++|++|+.+..   ++. +.   ..|+++.|+||++|++|  +|++++++ ++++.+
T Consensus       188 G~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l  267 (409)
T 2gb3_A          188 GVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHA  267 (409)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHH
T ss_pred             CCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHH
Confidence            99987     34454 589999999999986543   222 22   33688999999999888  89999998 777654


Q ss_pred             CCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCcee-cCCCCCCCc
Q 043610          286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYK-CPVEKSVRS  364 (430)
Q Consensus       286 ~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~-~~~~~~~rs  364 (430)
                      ..       .   ...  .. +++...+.++..+|+...  .+++.+.+++.++++++.+.|.+ .|+++ ..  +  ..
T Consensus       268 ~~-------~---~~~--~~-~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~--~--~~  327 (409)
T 2gb3_A          268 MK-------L---AQG--RL-APPLLEQIGSVGLLNLDD--SFFDFVRETYRERVETVLKKLEE-HGLKRFTK--P--SG  327 (409)
T ss_dssp             HH-------H---HHH--SC-CCCHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHHHHHHHH-TTCCCBCC--C--SB
T ss_pred             HH-------H---Hhc--cC-CCCHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHHH-cCceeeeC--C--Ce
Confidence            21       0   000  11 567777777777775322  24778889999999999999997 47766 32  2  12


Q ss_pred             cceEEEEcCCCchhHHHHHHHHHc------CCeecCCCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          365 FMNVPFTLEKSDLEAEFVKEAAKE------KMVQLKGHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~~~~~~L~~~------Gi~~~~g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...+.+.+++ ....++.+.|.++      ||.+.+|..       ..+++||+++  +++++++++++.|++++++
T Consensus       328 ~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~  401 (409)
T 2gb3_A          328 AFYITAELPV-EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKM  401 (409)
T ss_dssp             SSEEEEECSS-SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEeCC-CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence            3334456652 1233788888876      999876531       1457999998  7999999999999998764

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.93  E-value=3.9e-25  Score=221.36  Aligned_cols=336  Identities=14%  Similarity=0.083  Sum_probs=227.2

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHH-HHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIE-KAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~-~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      ++.+++.+|..++++.|++++.+.+.+....+... .....+....+.++ .+|+.+++++|.++  ..+++ ++||+++
T Consensus        23 ~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~g~~~~~~~e~~ar~~la~~~g~~~--~~i~~-~sGt~a~   98 (407)
T 2dkj_A           23 REGLELIASENFVSKQVREAVGSVLTNKYAEGYPG-ARYYGGCEVIDRVESLAIERAKALFGAAW--ANVQP-HSGSQAN   98 (407)
T ss_dssp             HTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSE--EECCC-SSHHHHH
T ss_pred             hcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCc-ccccCCchHHHHHHHHHHHHHHHHhCCCc--ceEEe-cchHHHH
Confidence            45788888888889999999998875411111110 01111222223333 47789999999975  33444 4567899


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHH-HHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCcc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKA-FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHG  222 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~-~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG  222 (430)
                      ..++..++++||+|++..+.+.+... ...++..| .+..++..-+ +....+|+++++  ++ +++++|++++++++  
T Consensus        99 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--  175 (407)
T 2dkj_A           99 MAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVR-PDTELIDLEEVRRLALEHRPKVIVAGASAYP--  175 (407)
T ss_dssp             HHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCC-TTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--
T ss_pred             HHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCC-cccCccCHHHHHHHHhhcCCeEEEEeccccC--
Confidence            99999988999999987765543310 01122334 3444444211 112247888887  55 48999999777774  


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCCCccc-----cccccEEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCcc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCSKPVD-----VTRFGVIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLM  292 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-----l~~~d~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~  292 (430)
                      ...|  +|.++ +++|+++++|++|+.|..+.+     ++..|++++|+||++ |+.| |+++++ +++++.+.+..   
T Consensus       176 ~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~---  251 (407)
T 2dkj_A          176 RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLI---  251 (407)
T ss_dssp             SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHH---
T ss_pred             CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhh---
Confidence            6667  67775 688999999999987543222     223589999999999 5887 999999 78877643210   


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                              .....++++...+.++.++++.+.. .+++++.++.+++++++++.|++ .|+++.. ++ ..+ ..+.+.+
T Consensus       252 --------~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~-~~~-~~~~~~~  318 (407)
T 2dkj_A          252 --------FPGIQGGPLEHVIAGKAVAFFEALQ-PEFKEYSRLVVENAKRLAEELAR-RGYRIVT-GG-TDN-HLFLVDL  318 (407)
T ss_dssp             --------TTTTCSSCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-GS-CSS-SEEEEEC
T ss_pred             --------cccccCCCcHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHh-CCceeec-CC-CCc-eEEEEEC
Confidence                    0112357777777778888887642 36899999999999999999997 4887763 11 223 3566777


Q ss_pred             CCCchhH-HHHHHHHHcCCeecCCCC--------CCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610          373 EKSDLEA-EFVKEAAKEKMVQLKGHR--------SVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       373 ~~~~~~~-~~~~~L~~~Gi~~~~g~~--------~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~  428 (430)
                      ++.+.+. ++.+.|.++||.+.+|..        ..+++|+|++.+    ++++|+++++++|++++++
T Consensus       319 ~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~  387 (407)
T 2dkj_A          319 RPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE  387 (407)
T ss_dssp             GGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence            6322233 688889999999876531        135799999753    6899999999999998764

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.93  E-value=2.3e-24  Score=221.37  Aligned_cols=339  Identities=12%  Similarity=0.010  Sum_probs=219.7

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCc--------EEEEEe
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEY--------SVLFLQ  140 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~--------~vv~~~  140 (430)
                      ++.+.+-+++...+..+.+.+...+ +  .++.    .+..++...++.+++.+.+++++|.+++.        ..+|+ 
T Consensus        74 p~~~~~~~~~~~~~~~~~~~l~~~~-n--~~~~----~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t-  145 (475)
T 3k40_A           74 PKFHAYFPTANSYPAIVADMLSGAI-A--CIGF----TWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQ-  145 (475)
T ss_dssp             TTBCCSSCCCCCHHHHHHHHHHHHH-C--CCSS----SCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEE-
T ss_pred             cCceeeCCCCCcHHHHHHHHHHHHh-C--cccc----CccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEc-
Confidence            4555555566545544444544443 2  1111    12236778888889999999999998532        45664 


Q ss_pred             CcHHHHHHHHHhhcC-------------------CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCc
Q 043610          141 GGATTQFAAVPLNLC-------------------TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNF  200 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~-------------------~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~  200 (430)
                      +|||+++..++....                   .+++.|++....|++  +.+.++..| +++.++.++    +. +|+
T Consensus       146 ~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s--~~~~~~~~g~~~~~v~~d~----~~-~d~  218 (475)
T 3k40_A          146 GTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSS--VERAGLLGGVKLRSVQSEN----HR-MRG  218 (475)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHH--HHHHHHHHTCEEEEECCBT----TB-CCH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHH--HHHHHHHcCCceEEEECCC----CC-cCH
Confidence            789999887665541                   123455555555655  334455567 888887742    33 788


Q ss_pred             cccc--cCCC------ccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc--------ccccccEEEe
Q 043610          201 DALE--QNPD------AKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV--------DVTRFGVIYA  261 (430)
Q Consensus       201 ~~l~--i~~~------~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--------dl~~~d~~~~  261 (430)
                      ++|+  +.++      +.+|++++++|++|.+.|  +|+++ +++|+++++|++++.+....        .+...|++++
T Consensus       219 ~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~  298 (475)
T 3k40_A          219 AALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNF  298 (475)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEE
T ss_pred             HHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEE
Confidence            8887  5433      678999999999999998  78886 78999999999998764321        1223489999


Q ss_pred             CCCcccc-CCccEEEEEcHHH-HhccCCCCCccccccch---hh--cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043610          262 GAQKNVG-PSGVTIVIVRKDL-LGNAQDKTPLMLDYKIH---DE--NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEK  334 (430)
Q Consensus       262 s~~K~~g-p~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~---~~--~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~  334 (430)
                      ++|||++ |.|+|+++++++. +.......+.|+.....   ..  .....++.+ +....+..+|+.+.. .|++++.+
T Consensus       299 ~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~-~g~~~~~~  376 (475)
T 3k40_A          299 NPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRR-FRALKLWFVLRLYGV-ENLQAHIR  376 (475)
T ss_dssp             CHHHHSSCCSSCEEEEESSGGGC---------------------------CCCGG-GTHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             CchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCc-ccHHHHHHHHHHHhH-HHHHHHHH
Confidence            9999995 9999999998653 22211112223311100   00  001112222 234556667776653 48999999


Q ss_pred             HHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch-hHHHHHHHHHcCCeecCCCC--CCCeeEEeecCC-C
Q 043610          335 MNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL-EAEFVKEAAKEKMVQLKGHR--SVGGMRASIYNA-M  410 (430)
Q Consensus       335 ~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~-~~~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~-~  410 (430)
                      +..++++++++.|++..|++++. ++  .. .+++|.+++... ..++.++|.++|++...+..  ....+|+++.++ +
T Consensus       377 ~~~~~a~~l~~~L~~~~g~~l~~-~~--~~-~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~t  452 (475)
T 3k40_A          377 RHCNFAKQFGDLCVADSRFELAA-EI--NM-GLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFT  452 (475)
T ss_dssp             HHHHHHHHHHHHHHHSTTEEESS-CC--BT-TEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTC
T ss_pred             HHHHHHHHHHHHHhcCCCEEEec-CC--ce-EEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCC
Confidence            99999999999999867999874 22  23 578899864322 23788899888775432111  124799998765 5


Q ss_pred             CHHHHHHHHHHHHHHHHh
Q 043610          411 PLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       411 t~edv~~ll~~L~~~~~~  428 (430)
                      +++||+++++.|++++++
T Consensus       453 t~~di~~~~~~i~~~~~~  470 (475)
T 3k40_A          453 QSEDMEYSWKEVSAAADE  470 (475)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            899999999999998764

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.92  E-value=1.7e-24  Score=217.72  Aligned_cols=328  Identities=14%  Similarity=0.110  Sum_probs=223.3

Q ss_pred             CceeecCC------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------------CC
Q 043610           70 RVFNFAAG------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------------IP  131 (430)
Q Consensus        70 ~~~l~~~g------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------------~~  131 (430)
                      .+++|+.|      ..++++.|++++.+.+.+..        .+.+++.  ....++|+.++++++            ++
T Consensus        34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~--~~~~~lr~~la~~~~~~~~~~~~~~~~~~  103 (416)
T 1bw0_A           34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQE--------CNGYFPT--VGSPEAREAVATWWRNSFVHKEELKSTIV  103 (416)
T ss_dssp             CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTC--------SSSCCCT--TCCHHHHHHHHHHHHHHHCCSTTTGGGCC
T ss_pred             CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCc--------cCCcCCC--CCCHHHHHHHHHHHHhhhcccccCCCCCC
Confidence            45566554      25778999999998875421        1111110  112356677777776            55


Q ss_pred             CCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCC
Q 043610          132 QEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPD  208 (430)
Q Consensus       132 ~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~  208 (430)
                      ++ +|+++ +|++++++.++..++++||+|++..+++.+..  ..++..| +++.++...+  .+..+|+++++  ++++
T Consensus       104 ~~-~v~~~-~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~  177 (416)
T 1bw0_A          104 KD-NVVLC-SGGSHGILMAITAICDAGDYALVPQPGFPHYE--TVCKAYGIGMHFYNCRPE--NDWEADLDEIRRLKDDK  177 (416)
T ss_dssp             GG-GEEEE-SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHTTCEEEEEEEEGG--GTTEECHHHHHHHCCTT
T ss_pred             cc-eEEEe-CChHHHHHHHHHHhCCCCCEEEEcCCCcHhHH--HHHHHcCcEEEEeecCcc--cCCCCCHHHHHHHhccC
Confidence            54 67765 79999999999999999999999888877643  4566677 7777776431  12246888887  7788


Q ss_pred             ccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC----CC----Cccccccc-----cEEEeCCCccccC
Q 043610          209 AKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF----CS----KPVDVTRF-----GVIYAGAQKNVGP  269 (430)
Q Consensus       209 ~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~----G~----~~idl~~~-----d~~~~s~~K~~gp  269 (430)
                      +++|++++++|+||.++|  +   |.++ +++|+++++|++++.    |.    ...++..+     .+++.|++|+++.
T Consensus       178 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  257 (416)
T 1bw0_A          178 TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVV  257 (416)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSC
T ss_pred             CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCC
Confidence            999999999999999999  3   4443 578999999999875    22    12233222     2678899999987


Q ss_pred             Cc--cEEEEEcHH--HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 043610          270 SG--VTIVIVRKD--LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN  345 (430)
Q Consensus       270 ~G--~g~l~v~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~  345 (430)
                      +|  +|+++++++  +++.+..   ....+      ....+++|...++++..+|+... ..+++...++++++++++++
T Consensus       258 ~Glr~G~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~  327 (416)
T 1bw0_A          258 PGWRLGWLLYVDPHGNGPSFLE---GLKRV------GMLVCGPCTVVQAALGEALLNTP-QEHLDQIVAKIEESAMYLYN  327 (416)
T ss_dssp             GGGCCEEEEEECTTCSCHHHHH---HHHHH------HHHHTCSCHHHHHHHHHHHHSSC-HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEeeCchhhHHHHHH---HHHHH------hccccCCCcHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHH
Confidence            78  899998764  3332110   00000      00124678888888888887422 23578889999999999999


Q ss_pred             HHHccCCceecCCCCCCCccceEEEEcCCC-----chhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHH
Q 043610          346 VIDGSNGFYKCPVEKSVRSFMNVPFTLEKS-----DLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       346 ~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~-----~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~  417 (430)
                      .|.+..|+.+..  + ..+ ..+.+.++..     ....++.+.| .++||.+.+|..  ..+++|||++  ++++++++
T Consensus       328 ~L~~~~g~~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~--~~~e~l~~  401 (416)
T 1bw0_A          328 HIGECIGLAPTM--P-RGA-MYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT--RPVEVYRE  401 (416)
T ss_dssp             HHTTSTTEEECC--C-CBT-TEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHH
T ss_pred             HHHhCCCCcccC--C-Cee-EEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEec--CCHHHHHH
Confidence            998745877652  2 122 2344566421     1133688887 578999877642  2468999995  58999999


Q ss_pred             HHHHHHHHHHhh
Q 043610          418 LVAFMKDFQAKH  429 (430)
Q Consensus       418 ll~~L~~~~~~~  429 (430)
                      +++.|+++++++
T Consensus       402 ~l~~l~~~l~~~  413 (416)
T 1bw0_A          402 AVERIKAFCQRH  413 (416)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999988764

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.92  E-value=3.1e-24  Score=215.18  Aligned_cols=324  Identities=11%  Similarity=0.033  Sum_probs=218.2

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ..+++++.|..+.++.|++++.+.+.+    +  .+   ..+    ....++++.+++++|.+   +++++ +|||+++.
T Consensus        30 ~~~id~~~~~~~~~~~v~~a~~~~~~~----~--~y---~~~----~~~~~l~~~la~~~~~~---~~v~~-~~Gt~a~~   92 (399)
T 2oga_A           30 VPFLDLKAAYEELRAETDAAIARVLDS----G--RY---LLG----PELEGFEAEFAAYCETD---HAVGV-NSGMDALQ   92 (399)
T ss_dssp             BCSCCHHHHHHHTHHHHHHHHHHHHHH----T--CC---SSS----HHHHHHHHHHHHHTTSS---EEEEE-SCHHHHHH
T ss_pred             CcccccCcCCCCCCHHHHHHHHHHHhc----C--CC---CCc----hhHHHHHHHHHHHHCCC---eEEEe-cCHHHHHH
Confidence            346778777766779999999988753    0  01   111    34568899999999986   45665 67899999


Q ss_pred             HHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc
Q 043610          149 AVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       149 ~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~  224 (430)
                      .++.++ +++||+|++...++.+.  ...++..| +++.++..++   +..+|+++++  +++++++|++   +|+||.+
T Consensus        93 ~~l~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~---~~~~d~~~l~~~i~~~~~~v~~---~n~tG~~  164 (399)
T 2oga_A           93 LALRGLGIGPGDEVIVPSHTYIAS--WLAVSATGATPVPVEPHED---HPTLDPLLVEKAITPRTRALLP---VHLYGHP  164 (399)
T ss_dssp             HHHHHTTCCTTCEEEEESSSCTHH--HHHHHHTTCEEEEECBCSS---SSSBCHHHHHHHCCTTEEEECC---BCGGGCC
T ss_pred             HHHHHhCCCCcCEEEECCCccHHH--HHHHHHCCCEEEEEecCCC---CCCcCHHHHHHhcCCCCeEEEE---eCCcCCc
Confidence            999998 88999999887776663  23456678 7777776431   2247888887  7778887774   5789999


Q ss_pred             CC--CCccc-cCCCcEEEEeccCcCCCCccc---ccc-ccEEEeCC--CccccCCc-cEEEEEc-HHHHhccCCCCC--c
Q 043610          225 FK--EYPSA-KNSTGILVADMSSNFCSKPVD---VTR-FGVIYAGA--QKNVGPSG-VTIVIVR-KDLLGNAQDKTP--L  291 (430)
Q Consensus       225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~~id---l~~-~d~~~~s~--~K~~gp~G-~g~l~v~-~~~~~~~~~~~p--~  291 (430)
                      .|  +|.++ +++|+++++|++|++|... +   +.. .|++++|+  +|++|++| .|+++.+ +++++.+.+...  .
T Consensus       165 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~  243 (399)
T 2oga_A          165 ADMDALRELADRHGLHIVEDAAQAHGARY-RGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGS  243 (399)
T ss_dssp             CCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTC
T ss_pred             cCHHHHHHHHHHcCCEEEEECcccccCcc-CCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCc
Confidence            98  78886 6889999999999988642 2   222 27888998  59998765 5777775 777665422100  0


Q ss_pred             cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                      ...|..  .......+++....+++..+++.      ++.+.++.+++++++++.|.+..|+++.. .++......+.|.
T Consensus       244 ~~~~~~--~~~g~~~~~~~~~~a~~~~~l~~------~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~~~~~~  314 (399)
T 2oga_A          244 RQKYSH--ETKGTNSRLDEMQAAVLRIRLAH------LDSWNGRRSALAAEYLSGLAGLPGIGLPV-TAPDTDPVWHLFT  314 (399)
T ss_dssp             SSTTCC--CSCCCBCCCCHHHHHHHHHHHHT------HHHHHHHHHHHHHHHHHHTTTCTTCBCCC-CCTTEECCCSSEE
T ss_pred             cccccc--cccccCCCcCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHhccCCCccccC-CCCCCcceeEEEE
Confidence            000100  00001124455555555556653      34567788888999999998755776532 2222222111233


Q ss_pred             cCCCchhHHHHHHHHHcCCeecCCCCC-------------------------CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          372 LEKSDLEAEFVKEAAKEKMVQLKGHRS-------------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~~-------------------------~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +.. ....++.+.|.++||.+..+...                         .+.|||+++.+++++|+++++++|++++
T Consensus       315 ~~~-~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  393 (399)
T 2oga_A          315 VRT-ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWA  393 (399)
T ss_dssp             EEC-SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHH
T ss_pred             EEC-CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence            332 11337999999999987654310                         1469999999999999999999999987


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       394 ~~  395 (399)
T 2oga_A          394 ER  395 (399)
T ss_dssp             HS
T ss_pred             HH
Confidence            64

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.92  E-value=8.2e-24  Score=219.21  Aligned_cols=342  Identities=13%  Similarity=0.034  Sum_probs=221.7

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEeCcHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE-YSVLFLQGGATTQ  146 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~-~~vv~~~~gaT~a  146 (430)
                      .++.+.+-+++...+.-+.+++...+..    +..   .+..++...++.+++++.+++++|.+.+ ..++++ +|+|++
T Consensus        95 ~p~f~~~~~~~~~~~~~~~e~l~~~~~~----~~~---~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t-~ggt~a  166 (511)
T 3vp6_A           95 HPRFFNQLSTGLDIIGLAGEWLTSTANT----NMF---TYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFS-PGGAIS  166 (511)
T ss_dssp             STTEESSSSCCCCHHHHHHHHHHHHHCC----CSS---CTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEE-SSHHHH
T ss_pred             CCCceEeecCCCcHHHHHHHHHHHHhcc----CCC---CcccCchHHHHHHHHHHHHHHHhCCCCCCCceEEC-CchHHH
Confidence            3445555566554444444555554421    111   1123577888888999999999999832 256664 789999


Q ss_pred             HHHHHhhcCC--------------CCCcEEEEeCChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc--cC
Q 043610          147 FAAVPLNLCT--------------PNDPVDYIVTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE--QN  206 (430)
Q Consensus       147 ~~~~~~sl~~--------------~gd~vl~~~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i~  206 (430)
                      +..++..+..              +++.|++....+++.  .+.++..|    +++.++...   .+ .+|+++|+  +.
T Consensus       167 ~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~--~~~~~~~g~g~~~~~~v~~d~---~~-~~d~~~Le~~i~  240 (511)
T 3vp6_A          167 NMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSI--KKAGAALGFGTDNVILIKCNE---RG-KIIPADFEAKIL  240 (511)
T ss_dssp             HHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHH--HHHHHHTTSCGGGEEEECBCT---TS-CBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHH--HHHHHHcCCCCCcEEEeecCC---CC-ccCHHHHHHHHH
Confidence            9877666532              355566555556553  33444444    345555532   23 57888887  54


Q ss_pred             CC------ccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc-----ccc---ccccEEEeCCCcccc-
Q 043610          207 PD------AKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP-----VDV---TRFGVIYAGAQKNVG-  268 (430)
Q Consensus       207 ~~------~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~-----idl---~~~d~~~~s~~K~~g-  268 (430)
                      ++      +++|++++++|++|.+.|  +|+++ +++|++++||++++.|...     .++   ...|++++++|||++ 
T Consensus       241 ~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~  320 (511)
T 3vp6_A          241 EAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGV  320 (511)
T ss_dssp             HHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCC
T ss_pred             HHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCC
Confidence            43      889999999999999988  78886 6899999999999987762     223   344899999999995 


Q ss_pred             CCccEEEEEcHH-HHhccCCCCCccccccch-----hh--cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          269 PSGVTIVIVRKD-LLGNAQDKTPLMLDYKIH-----DE--NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       269 p~G~g~l~v~~~-~~~~~~~~~p~~~~~~~~-----~~--~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      |.|+|+++++++ ++.......+.|+.....     ..  ......+.+ +...++..+++.+.. .|++++.+++.+++
T Consensus       321 p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~-~~al~~~~al~~~g~-~gl~~~~~~~~~~a  398 (511)
T 3vp6_A          321 LLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRH-VDIFKFWLMWKAKGT-VGFENQINKCLELA  398 (511)
T ss_dssp             CSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCC-CCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred             CcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCc-hHHHHHHHHHHHHhH-HHHHHHHHHHHHHH
Confidence            999999999764 444432222323211000     00  000111211 234555666666553 48999999999999


Q ss_pred             HHHHHHHHccCCceecCCCCCCCccceEEEEcCCCch----------------hHHHHHHHHHcCCeecC-C--CCCCCe
Q 043610          341 ELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDL----------------EAEFVKEAAKEKMVQLK-G--HRSVGG  401 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~----------------~~~~~~~L~~~Gi~~~~-g--~~~~g~  401 (430)
                      +++++.|++.+|++++...++ .. .+++|.+.+.+.                ..++.++|.++|++... .  ....+.
T Consensus       399 ~~l~~~L~~~pg~~l~~~~~p-~~-~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~  476 (511)
T 3vp6_A          399 EYLYAKIKNREEFEMVFNGEP-EH-TNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANF  476 (511)
T ss_dssp             HHHHHHHHSCTTEEESSSSCC-SS-SCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEE
T ss_pred             HHHHHHHhcCCCEEEEecCCC-Ce-EEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEE
Confidence            999999998679998742122 23 357777543221                11477888888876432 1  111236


Q ss_pred             eEEee-cCCCCHHHHHHHHHHHHHHHH
Q 043610          402 MRASI-YNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       402 iRis~-~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +||++ +.+++++||++++++|+++.+
T Consensus       477 lRi~~~~~~~t~~di~~ll~~i~~~~~  503 (511)
T 3vp6_A          477 FRMVISNPAATQSDIDFLIEEIERLGQ  503 (511)
T ss_dssp             EEECCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             EEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence            99999 568899999999999998754

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.92  E-value=1.3e-24  Score=223.09  Aligned_cols=347  Identities=14%  Similarity=0.090  Sum_probs=218.1

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHH-HHHHHHHHHHhCCCCCcE-EEEEeCcHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSII-EKAESDLRALLNIPQEYS-VLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~-~~~r~~la~l~g~~~~~~-vv~~~~gaT~a~  147 (430)
                      +.+++.++|.++++.|+++|...+.+..+.|... .....+.++.+.+ +.+++.+++++|++.++- +.+.++|||+|+
T Consensus        55 ~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g-~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An  133 (490)
T 2a7v_A           55 RGLELIASENFCSRAALEALGSCLNNKYSEGYPG-KRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPAN  133 (490)
T ss_dssp             HSEECCTTCCCCCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHH
T ss_pred             cCceEECCCCCCCHHHHHHHHHHHcCCCccCCCc-ccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHH
Confidence            6788889999999999999999887655434311 1122233443333 478899999999986311 344456899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhH---HHHHH---HHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeec
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWG---DKAFK---EAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICAN  217 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~---~~~~~---~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~  217 (430)
                      .+++.++++|||+|++....+.+   +.+..   .....| ....++..-+.+.+ .+|+++++  +. +++++|+++.+
T Consensus       134 ~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~-~iD~d~le~~l~~~~~klIi~~~s  212 (490)
T 2a7v_A          134 LAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG-LIDYNQLALTARLFRPRLIIAGTS  212 (490)
T ss_dssp             HHHHHHHCCSCEECCC-------------------------------CCBCTTTC-SBCHHHHHHHHHHHCCSEEEECCS
T ss_pred             HHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccC-CcCHHHHHHHHhhcCCcEEEEcCC
Confidence            99999999999999976644322   22211   111224 33333332111123 68999887  43 47888887765


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCC-----CccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCC
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS-----KPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~-----~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~  288 (430)
                      .+  |+..|  +|.++ +++|+++++|++|.+|.     .+..+...|++++|+||++ ||.| |+++++++++.. .+.
T Consensus       213 ~~--~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~-~~~  288 (490)
T 2a7v_A          213 AY--ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKAV-DPK  288 (490)
T ss_dssp             SC--CSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCSC-EEEEEECSEEEE-ETT
T ss_pred             CC--CCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccccc-hheeeccchhcc-ccc
Confidence            55  56677  78886 68999999999987543     2334445689999999999 6998 999988753210 000


Q ss_pred             --CCccccccchhh---cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          289 --TPLMLDYKIHDE---NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       289 --~p~~~~~~~~~~---~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                        .+.+.++....+   .....++|+...+.++..|++.... .++++..++..++++++++.|.+ .|+.+.. .. ..
T Consensus       289 ~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~-~~~~~~~~~~~~na~~L~~~L~~-~G~~v~~-~~-t~  364 (490)
T 2a7v_A          289 TGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACT-PMFREYSLQVLKNARAMADALLE-RGYSLVS-GG-TD  364 (490)
T ss_dssp             TEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-GS-CS
T ss_pred             ccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHH-cCcEEec-CC-CC
Confidence              000111111111   1112367888888888888887652 24578889999999999999997 7998863 11 12


Q ss_pred             ccceEEEEcCCCchhH-HHHHHHHHcCCeecC----CCC---CCCeeEEeecC----CCCHHHHHHHHHHHHHHHH
Q 043610          364 SFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLK----GHR---SVGGMRASIYN----AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       364 s~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~----g~~---~~g~iRis~~~----~~t~edv~~ll~~L~~~~~  427 (430)
                      + +++.+.+.+.+.+. ++.+.|.+.||.+..    +.+   ..++|||+...    ..+++|+++++++|.+++.
T Consensus       365 t-~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~  439 (490)
T 2a7v_A          365 N-HLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             S-SEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             C-eEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence            2 45667776444444 677888889999753    322   13579998633    4589999999999998775

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.92  E-value=1.1e-23  Score=208.70  Aligned_cols=285  Identities=13%  Similarity=0.098  Sum_probs=206.2

Q ss_pred             HHHHHHHHHh-CCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC
Q 043610          119 KAESDLRALL-NIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK  196 (430)
Q Consensus       119 ~~r~~la~l~-g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~  196 (430)
                      ++|+.+++++ +.+++ +++++ +|+++|+..++.+++++||+|++..+++.+..  ..++..| +++.++...+  .+.
T Consensus        67 ~l~~~la~~~~~~~~~-~v~~~-~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~  140 (375)
T 3op7_A           67 AFKKSVSQLYTGVKPE-QILQT-NGATGANLLVLYSLIEPGDHVISLYPTYQQLY--DIPKSLGAEVDLWQIEEE--NGW  140 (375)
T ss_dssp             HHHHHHHTTSSSCCGG-GEEEE-SHHHHHHHHHHHHHCCTTCEEEEEESSCTHHH--HHHHHTTCEEEEEEEEGG--GTT
T ss_pred             HHHHHHHHHhccCChh-hEEEc-CChHHHHHHHHHHhcCCCCEEEEeCCCchhHH--HHHHHcCCEEEEEecccc--CCC
Confidence            6778888887 45555 67765 89999999999999999999998888877643  4466677 7777776432  233


Q ss_pred             CCCccccc--cCCCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc-----cccccccEEEeCC
Q 043610          197 IPNFDALE--QNPDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP-----VDVTRFGVIYAGA  263 (430)
Q Consensus       197 ~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~-----idl~~~d~~~~s~  263 (430)
                      .+|+++++  +++++++|++++++|+||.+.|  +   |.++ +++|+++++|++|+.+...     .+..+.++++.|+
T Consensus       141 ~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~  220 (375)
T 3op7_A          141 LPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSL  220 (375)
T ss_dssp             EECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEES
T ss_pred             CCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEC
Confidence            46888887  7889999999999999999999  3   4444 5899999999998754332     1222224889999


Q ss_pred             CccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          264 QKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       264 ~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      +|++|++|  +|++++++++++.+.....            ....+++...++++..+++...+  .++..+++++++++
T Consensus       221 sK~~~~~G~r~G~v~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~  286 (375)
T 3op7_A          221 SKTYSLPGIRIGWVAANHQVTDILRDYRD------------YTMICAGVFDDLVAQLALAHYQE--ILERNRHILEENLA  286 (375)
T ss_dssp             SSSSSCGGGCCEEEECCHHHHHHHTTTGG------------GTTSCCCHHHHHHHHHHHHTHHH--HHHHHHHHHHHHHH
T ss_pred             hhhcCCcccceEEEEeCHHHHHHHHHHHh------------hhccCCCcHHHHHHHHHHhccHH--HHHHHHHHHHHHHH
Confidence            99999777  6999999998887643111            11135566777777777775432  46778888899999


Q ss_pred             HHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHH
Q 043610          342 LLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~l  418 (430)
                      .+.+.|.+..++....  +. .+ ..+.+.++......++.++| +++||.+.+|..  ..+++||+++.  +.++++++
T Consensus       287 ~l~~~l~~~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~i~~~  360 (375)
T 3op7_A          287 ILDQWIEEEPLVSYIR--PA-VV-STSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC--EQETLIKG  360 (375)
T ss_dssp             HHHHHHHHCTTEEECC--CS-SS-SCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS--CHHHHHHH
T ss_pred             HHHHHHhhCCCceEec--CC-Ce-EEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC--CHHHHHHH
Confidence            9999998755776543  11 12 22334454322233788877 678999877542  24689999875  55999999


Q ss_pred             HHHHHHHHHhh
Q 043610          419 VAFMKDFQAKH  429 (430)
Q Consensus       419 l~~L~~~~~~~  429 (430)
                      ++.|++++++.
T Consensus       361 l~~l~~~l~~~  371 (375)
T 3op7_A          361 LEKLSQFLRRF  371 (375)
T ss_dssp             HHHHHHHHGGG
T ss_pred             HHHHHHHHHHH
Confidence            99999988754

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.92  E-value=2.7e-24  Score=215.27  Aligned_cols=310  Identities=12%  Similarity=0.052  Sum_probs=212.9

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC--CCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC--TPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~--~~g  158 (430)
                      .++.|++++.+.+.++..... .+ ...+  ......+++|+.+++++|.++  ++++ ++ |++++..++..+.  .+|
T Consensus        61 ~~p~v~~a~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~l~~~la~~~~~~~--~i~~-~s-G~~a~~~~~~~l~~~~~g  132 (401)
T 2bwn_A           61 QHPVVLAAMHEALEAVGAGSG-GT-RNIS--GTTAYHRRLEAEIAGLHQKEA--ALVF-SS-AYNANDATLSTLRVLFPG  132 (401)
T ss_dssp             GCHHHHHHHHHHHHHHCSCCC-SB-TTTB--CCBHHHHHHHHHHHHHTTCSE--EEEE-SC-HHHHHHHHHHHHHHHSTT
T ss_pred             CCHHHHHHHHHHHHHcCCCCC-Cc-Cccc--CChHHHHHHHHHHHHHhCCCc--EEEE-CC-cHHHHHHHHHHHhcCCCC
Confidence            466899999998876432111 00 0011  112456689999999999852  5554 45 4557776655543  589


Q ss_pred             CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c---C-CCccEEEEeecCCCccccCC--CCc
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q---N-PDAKYLHICANETIHGVEFK--EYP  229 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i---~-~~~~lv~i~~~~t~tG~~~p--ei~  229 (430)
                      |+|++....|.+..  ..++..| +++.++..         |+++++  +   . +++++|++++++|+||.+.|  +|.
T Consensus       133 d~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~---------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~  201 (401)
T 2bwn_A          133 LIIYSDSLNHASMI--EGIKRNAGPKRIFRHN---------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEIC  201 (401)
T ss_dssp             CEEEEETTCCHHHH--HHHHHSCCCEEEECTT---------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHH
T ss_pred             CEEEECchhhHHHH--HHHHHcCCeEEEEcCC---------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHH
Confidence            98887665555432  2345567 76666541         344554  3   2 58999999999999999999  788


Q ss_pred             cc-cCCCcEEEEeccCcCCCC-c--------ccc-ccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccch
Q 043610          230 SA-KNSTGILVADMSSNFCSK-P--------VDV-TRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIH  298 (430)
Q Consensus       230 ~~-~~~g~~lvvD~a~s~G~~-~--------idl-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~  298 (430)
                      ++ +++|+++++|++|+.|.. +        .++ +..++++.|++|++|.+| |+++.++++++.+......   +   
T Consensus       202 ~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~~---~---  274 (401)
T 2bwn_A          202 DIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG-GYIAASARMVDAVRSYAPG---F---  274 (401)
T ss_dssp             HHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC-EEEEECHHHHHHHHHHCHH---H---
T ss_pred             HHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC-CEEecCHHHHHHHHHhCcC---c---
Confidence            86 688999999999995532 1        122 134788999999999778 9999998877653210000   0   


Q ss_pred             hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchh
Q 043610          299 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLE  378 (430)
Q Consensus       299 ~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~  378 (430)
                        . ...++++ ..++++..+++++. ..|++.+.++++++++++++.|.+. |+++.+  +  +++ ++.|.+++ +.+
T Consensus       275 --~-~~~~~~~-~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~--~~~-~~~~~~~~-~~~  342 (401)
T 2bwn_A          275 --I-FSTSLPP-AIAAGAQASIAFLK-TAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID--H--GSH-IVPVVIGD-PVH  342 (401)
T ss_dssp             --H-TSBCCCH-HHHHHHHHHHHHHT-SHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC--C--SSS-CEEEECCC-HHH
T ss_pred             --e-ecCCCCH-HHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHC-CCcccC--C--CCC-eEEEEeCC-hHH
Confidence              0 1124555 67888888998775 3357899999999999999999974 877653  2  243 57788764 233


Q ss_pred             H-HHHHHHH-HcCCeecCCCC---C--CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          379 A-EFVKEAA-KEKMVQLKGHR---S--VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       379 ~-~~~~~L~-~~Gi~~~~g~~---~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      . ++.+.|. ++||.+.++..   .  .+.+|||++.+++++|+++++++|++++++
T Consensus       343 ~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~  399 (401)
T 2bwn_A          343 TKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR  399 (401)
T ss_dssp             HHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence            3 6888885 78999865431   1  247999999999999999999999998764

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.92  E-value=1e-23  Score=211.38  Aligned_cols=322  Identities=14%  Similarity=0.129  Sum_probs=218.2

Q ss_pred             CceeecCCCC----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----CC--CCCcEEEEE
Q 043610           70 RVFNFAAGPA----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----NI--PQEYSVLFL  139 (430)
Q Consensus        70 ~~~l~~~gp~----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~--~~~~~vv~~  139 (430)
                      .+++|+.|-.    ..++.+++++.+.+.+..   ..   .. ++..  ....++|+.+++++    |.  +++ +|+++
T Consensus        35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~---~~---~~-y~~~--~~~~~l~~~la~~~~~~~g~~~~~~-~v~~t  104 (407)
T 2zc0_A           35 KLISLAAGDPDPELIPRAVLGEIAKEVLEKEP---KS---VM-YTPA--NGIPELREELAAFLKKYDHLEVSPE-NIVIT  104 (407)
T ss_dssp             CCEECCSCCCCTTTSCHHHHHHHHHHHHHHCG---GG---GS-CCCT--TCCHHHHHHHHHHHHHHSCCCCCGG-GEEEE
T ss_pred             ceEeCCCCCCCchhCCHHHHHHHHHHHHhhcc---cc---cc-CCCC--CCCHHHHHHHHHHHHHhcCCCCCcc-eEEEe
Confidence            5677766532    256789999988876421   00   11 1110  01234555555555    84  444 67664


Q ss_pred             eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----C--Ccc
Q 043610          140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----P--DAK  210 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~--~~~  210 (430)
                       +|+|++++.++..++++||+|++..+++.+.  ...++..| +++.++..+   .+  +|+++++  ++    +  +++
T Consensus       105 -~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~v~~~~---~~--~d~~~l~~~l~~~~~~~~~~~  176 (407)
T 2zc0_A          105 -IGGTGALDLLGRVLIDPGDVVITENPSYINT--LLAFEQLGAKIEGVPVDN---DG--MRVDLLEEKIKELKAKGQKVK  176 (407)
T ss_dssp             -SHHHHHHHHHHHHHCCTTCEEEEEESCCHHH--HHHHHTTTCEEEEEEEET---TE--ECHHHHHHHHHHHHHTTCCEE
T ss_pred             -cCHHHHHHHHHHHhcCCCCEEEEeCCChHHH--HHHHHHcCCEEEEcccCC---CC--CCHHHHHHHHHhhhcccCCce
Confidence             7899999999999989999999888877664  34455667 777777632   22  6788886  55    5  788


Q ss_pred             EE-EEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCC----ccccccc-----cEEEeCCCccccCCc--c
Q 043610          211 YL-HICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSK----PVDVTRF-----GVIYAGAQKNVGPSG--V  272 (430)
Q Consensus       211 lv-~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~idl~~~-----d~~~~s~~K~~gp~G--~  272 (430)
                      +| ++++++|+||.++|     +|.++ +++|+++++|++|+.+..    ..++..+     .+++.|++|++| +|  +
T Consensus       177 ~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~  255 (407)
T 2zc0_A          177 LIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRI  255 (407)
T ss_dssp             EEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCC
T ss_pred             EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcce
Confidence            87 57888999999999     34444 588999999999886532    1223322     268889999999 67  8


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHcc-
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL-GGLNEVEKMNRKKAELLYNVIDGS-  350 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~-~g~~~v~~~~~~l~~~l~~~l~~~-  350 (430)
                      |++++++++++.+....           . ....+.+...+.++..+++..... ..++.+.++++++++++.+.|.+. 
T Consensus       256 G~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  323 (407)
T 2zc0_A          256 GWIIAEGEILKKVLMQK-----------Q-PIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHL  323 (407)
T ss_dssp             EEEECCHHHHHHHHHHH-----------T-TTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEecCHHHHHHHHHHH-----------H-hhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999988877642200           0 011234666677777777643111 357788899999999999999863 


Q ss_pred             CCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHc-CCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          351 NGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKE-KMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       351 ~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~-Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      .|+.+..  +  .....+.+.+++ +.+. ++.+.|.++ ||.+.+|..      ..+++|||++.. +++|++++++.|
T Consensus       324 ~~~~~~~--~--~~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l  397 (407)
T 2zc0_A          324 PNAEFTK--P--IAGMFVMFFLPE-GADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKL  397 (407)
T ss_dssp             TTSCBCC--C--SBSSEEEEECST-TCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHH
T ss_pred             CCCEEec--C--CCcEEEEEEcCC-CCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHH
Confidence            4665432  2  122356677764 2333 799999887 999877642      235799999876 899999999999


Q ss_pred             HHHHHh
Q 043610          423 KDFQAK  428 (430)
Q Consensus       423 ~~~~~~  428 (430)
                      ++++++
T Consensus       398 ~~~l~~  403 (407)
T 2zc0_A          398 AKLYKE  403 (407)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998764

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.92  E-value=4.9e-24  Score=214.19  Aligned_cols=307  Identities=11%  Similarity=-0.005  Sum_probs=214.9

Q ss_pred             CcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCC
Q 043610           81 LPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd  159 (430)
                      .++.+++++.+.+.++. +.+.+.+..+     ..+..+++++.+++++|.+.   .+++ ++|++++..++..++++||
T Consensus        74 ~~p~v~~a~~~~l~~~~~~~~~~~~~~g-----~~~~~~~l~~~la~~~g~~~---~i~~-~sGt~a~~~~l~~~~~~gd  144 (409)
T 3kki_A           74 NHPLIKARLAKSLLEEQQSLFMSASFLQ-----NDYDKPMIEKRLAKFTGFDE---CLLS-QSGWNANVGLLQTICQPNT  144 (409)
T ss_dssp             TCHHHHHHHHHHHHSCCCCCCSBGGGGC-----STTTSCHHHHHHHHHHTCSE---EEEE-SCHHHHHHHHHHHHCCTTC
T ss_pred             CCHHHHHHHHHHHHHcCCCCCccccccC-----CcHHHHHHHHHHHHHhCCCe---EEEe-cchHHHHHHHHHHhcCCCC
Confidence            47899999999887642 1111111111     11234578899999999863   4555 4678999999999999999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccccCC--CCccc-c
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGVEFK--EYPSA-K  232 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~~~p--ei~~~-~  232 (430)
                      .|++....+.+..  ...+..| +++.++         ..|+++++  +. .++++|++++++|+||.+.|  +|.++ +
T Consensus       145 ~Vl~~~~~~~~~~--~~~~~~g~~~~~~~---------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~  213 (409)
T 3kki_A          145 NVYIDFFAHMSLW--EGARYANAQAHPFM---------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISK  213 (409)
T ss_dssp             EEEEETTSCHHHH--HHHHHTTCEEEEEC---------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred             EEEECCCcCHHHH--HHHHHcCCeEEEec---------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHH
Confidence            9987655554432  2333445 443332         25677776  44 35899999999999999999  78886 6


Q ss_pred             CCCcEEEEeccCcCCCCc---------cccc-cccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcC
Q 043610          233 NSTGILVADMSSNFCSKP---------VDVT-RFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENN  302 (430)
Q Consensus       233 ~~g~~lvvD~a~s~G~~~---------idl~-~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~  302 (430)
                      ++|+++++|++|+.|...         .++. +.|+++.|++|++|+.| |+++.++++++.+...... +.        
T Consensus       214 ~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g-g~v~~~~~~~~~~~~~~~~-~~--------  283 (409)
T 3kki_A          214 EFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA-GAIWCNNEVNRCVPFISYP-AI--------  283 (409)
T ss_dssp             HHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EEEEESSSGGGTHHHHCHH-HH--------
T ss_pred             HcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc-eEEEECHHHHHHHHHhCcC-cc--------
Confidence            899999999999875431         2232 34799999999998766 9999998876653211000 00        


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHH
Q 043610          303 SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFV  382 (430)
Q Consensus       303 ~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~  382 (430)
                       ..++.+...+.++.++++.+.+ .  ++++++++++++++++.|.+ .|+++..     .+ ..+.+.+++.....++.
T Consensus       284 -~~~~~~~~~~aa~~aal~~~~~-~--~~~~~~~~~~~~~l~~~L~~-~g~~~~~-----~~-~~~~~~~~~~~~~~~~~  352 (409)
T 3kki_A          284 -FSSTLLPYEAAGLETTLEIIES-A--DNRRQHLDRMARKLRIGLSQ-LGLTIRS-----ES-QIIGLETGDERNTEKVR  352 (409)
T ss_dssp             -HSBCCCHHHHHHHHHHHHHHHH-C--HHHHHHHHHHHHHHHHHHHT-TTCCCCC-----SS-SEEEEEEESHHHHHHHH
T ss_pred             -ccCCCcHHHHHHHHHHHHHHhc-C--HHHHHHHHHHHHHHHHHHHH-cCCccCC-----CC-CEEEEEeCCHHHHHHHH
Confidence             1124566777888888987753 2  68899999999999999997 5776541     23 35666766422223688


Q ss_pred             HHHHHcCCeecCCC-----CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          383 KEAAKEKMVQLKGH-----RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       383 ~~L~~~Gi~~~~g~-----~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.|.++||.+.+..     ...+++||++..+++++|+++++++|++++++
T Consensus       353 ~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          353 DYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             HHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence            99999999874321     12357999999999999999999999998875

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.92  E-value=8.5e-24  Score=215.01  Aligned_cols=331  Identities=13%  Similarity=0.127  Sum_probs=222.1

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccC-CCCcccccCCCcHHHHHHHHHHHHHHHHHh----CCCCCcEEEEEe
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRG-SGMSVMEMSHRGKEFKSIIEKAESDLRALL----NIPQEYSVLFLQ  140 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~~~~~~vv~~~  140 (430)
                      .+++++|+.|-  .+.++.|++++.+.+.+... .+.     +.+.+.  ....++|+.+++++    +++++ +|+++ 
T Consensus        68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~-----~~y~~~--~g~~~lr~~ia~~~~~g~~~~~~-~i~~t-  138 (449)
T 3qgu_A           68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGY-----SGYGAE--QGQGALREAVASTFYGHAGRAAD-EIFIS-  138 (449)
T ss_dssp             TCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCC-----CCSTTT--TCCHHHHHHHHHHHHTTTTCCGG-GEEEE-
T ss_pred             CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCC-----CCCCCC--CCcHHHHHHHHHHHHcCCCCCHH-HEEEc-
Confidence            45677777764  45789999999998875321 111     112111  12346777888877    66655 77775 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-C----------ceEEecCCCCcCCCCCCccccccCCCc
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-N----------PQVIWSGKAEKYTKIPNFDALEQNPDA  209 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~----------~~~v~~~~~~~~g~~~d~~~l~i~~~~  209 (430)
                      +|+++++..+ ..++++||+|++..+.+.++.  ..++..| +          +..++...+  .+..+++++  . +++
T Consensus       139 ~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~-~~~  210 (449)
T 3qgu_A          139 DGSKCDIARI-QMMFGSKPTVAVQDPSYPVYV--DTSVMMGMTGDHNGTGFDGIEYMVCNPD--NHFFPDLSK--A-KRT  210 (449)
T ss_dssp             SCHHHHHHHH-HHHHCSSSCEEEEESCCTHHH--HHHHHHTCSCCBCSSSBTTEEEEECCGG--GTTCCCGGG--C-CCC
T ss_pred             cCHHHHHHHH-HHHhCCCCEEEEcCCCChhHH--HHHHHcCCcccccccccceeEEEecccc--cCCcCChhH--c-CCC
Confidence            7899999998 888899999998888877653  4455667 6          777776432  122222222  2 689


Q ss_pred             cEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcC----CCCcccccc------ccEEEeCCCccccCCc--
Q 043610          210 KYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNF----CSKPVDVTR------FGVIYAGAQKNVGPSG--  271 (430)
Q Consensus       210 ~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~----G~~~idl~~------~d~~~~s~~K~~gp~G--  271 (430)
                      ++|++++++||||.+++  +   |.++ +++|+++++|++|+.    |..+..+..      .++++.|++|++|++|  
T Consensus       211 ~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r  290 (449)
T 3qgu_A          211 DIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVR  290 (449)
T ss_dssp             SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCC
T ss_pred             CEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccce
Confidence            99999999999999998  3   4443 588999999999875    222333322      2488999999999778  


Q ss_pred             cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      +|++++++++++..  ..+..-.+..  .....+++++.+.+.++..+++.... ..++++.++++++++++++.|.+ .
T Consensus       291 ~G~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~  364 (449)
T 3qgu_A          291 LGWTVVPKALKYAN--GEPVHADWNR--VMTTCFNGASNIVQAGGLACLQPEGL-KEMNAMIKFYKENAQILKTTFTE-M  364 (449)
T ss_dssp             CEEEECCTTCBCTT--SCBHHHHHHH--HHHHSCCCCCHHHHHHHHHHTSHHHH-HHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             eEEEecCHHHHhhh--hhhHHHHHHH--HhhcccCCCCHHHHHHHHHHHhhcCH-HHHHHHHHHHHHHHHHHHHHHHH-C
Confidence            89999988775420  0000000000  00112346778888888888764221 24688899999999999999997 5


Q ss_pred             CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc-CCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE-KMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~-Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      |+.+..  + ..+ ..+.+.+++ ....++.+.|.++ ||.+.+|..    ..++||||+..  ++++++++++.|++++
T Consensus       365 g~~~~~--~-~~~-~~~~~~~~~-~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~  437 (449)
T 3qgu_A          365 GFSVYG--G-DDA-PYIWVGFPG-KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG--SRENILEAVRRFKEAY  437 (449)
T ss_dssp             TCCEEE--S-SSS-SEEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred             CCeeeC--C-CCe-eEEEEECCC-CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence            877653  1 122 345667762 2233788887664 999877642    24689999654  9999999999999987


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       438 ~~  439 (449)
T 3qgu_A          438 GK  439 (449)
T ss_dssp             C-
T ss_pred             Hh
Confidence            64

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.92  E-value=2.9e-23  Score=203.97  Aligned_cols=307  Identities=12%  Similarity=0.093  Sum_probs=213.4

Q ss_pred             CCCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~  145 (430)
                      .+.+++|+.|  +.+.++.|++++.+.+..+...+         ...    ..++|+.+++++|++++ +|+++ +|+++
T Consensus        14 g~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~---------~~~----~~~lr~~la~~~~~~~~-~i~~t-~g~~~   78 (350)
T 3fkd_A           14 SSEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYP---------EPD----AGTLRQMLAKRNSVDNN-AILVT-NGPTA   78 (350)
T ss_dssp             --CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCC---------CTT----CHHHHHHHHHHTTCCGG-GEEEE-SHHHH
T ss_pred             cccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCC---------CCc----HHHHHHHHHHHhCcCHH-HEEEc-CCHHH
Confidence            3667887776  35678999999988774322111         111    13788999999999875 77775 89999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEec-CCCCcCCCCCCccccccCCCccEEEEeecCCCccc
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS-GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGV  223 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~-~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~  223 (430)
                      +++.++..+.  ||+|++..+.+.+..  ..++..| +++.++. .+.  .+  ++     . +++++|++++++||||.
T Consensus        79 al~~~~~~l~--gd~Vi~~~p~~~~~~--~~~~~~g~~~~~v~~~~~~--~~--~~-----~-~~~~~v~i~~p~nptG~  144 (350)
T 3fkd_A           79 AFYQIAQAFR--GSRSLIAIPSFAEYE--DACRMYEHEVCFYPSNEDI--GE--AD-----F-SNMDFCWLCNPNNPDGR  144 (350)
T ss_dssp             HHHHHHHHTT--TCEEEEEESCCHHHH--HHHHHTTCEEEEEETTSCG--GG--SC-----C-TTCSEEEEESSCTTTCC
T ss_pred             HHHHHHHHHC--CCEEEEeCCCcHHHH--HHHHHcCCeEEEEecCCcc--cc--Cc-----c-CCCCEEEEeCCCCCcCC
Confidence            9999998886  999998887776642  4566678 7777776 321  11  11     1 68999999999999999


Q ss_pred             cCC--CCccc-cC-CCcEEEEeccCcCCCCc-----cccccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCC
Q 043610          224 EFK--EYPSA-KN-STGILVADMSSNFCSKP-----VDVTRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTP  290 (430)
Q Consensus       224 ~~p--ei~~~-~~-~g~~lvvD~a~s~G~~~-----idl~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p  290 (430)
                      ++|  ++.++ +. ...++++|++|+.....     ..++..  ++++.|++|++|++|  +|++++++++++.+.... 
T Consensus       145 ~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~-  223 (350)
T 3fkd_A          145 LLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFS-  223 (350)
T ss_dssp             CCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTC-
T ss_pred             CCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhC-
Confidence            999  66664 21 22499999998643321     122222  378899999999667  899999999887653311 


Q ss_pred             ccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE
Q 043610          291 LMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       291 ~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f  370 (430)
                                   ..++++...+.++..+|+...  .-.+.+.++. ++++++++.|.+..|+.+.+  +  .+ ..+.+
T Consensus       224 -------------~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~--~--~~-~~~~~  282 (350)
T 3fkd_A          224 -------------TPWAVNALAIEAAKFILIHPA--QFTLPIRKWQ-RNTVDFITALNRLDGVEVHP--S--GT-TFFLL  282 (350)
T ss_dssp             -------------CTTCSCHHHHHHHHHHHHCTT--TTCCCHHHHH-HHHHHHHHHHHHSTTEEECC--C--SS-SEEEE
T ss_pred             -------------CCCCCCHHHHHHHHHHHhCHH--HHHHHHHHHH-HHHHHHHHHHhcCCCcEECC--C--CC-cEEEE
Confidence                         124677788888877776321  0123344444 88899999998755887753  1  23 33457


Q ss_pred             EcCCCchhHHHHHHHHH-cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          371 TLEKSDLEAEFVKEAAK-EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       371 ~~~~~~~~~~~~~~L~~-~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .++.. ...++.+.|.+ +||.+.+|..    ..+++|||++   +++|+++++++|+++.+++
T Consensus       283 ~~~~~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~~~  342 (350)
T 3fkd_A          283 RLKKG-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLEKY  342 (350)
T ss_dssp             EESSS-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHTC-
T ss_pred             ECCCC-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHHHh
Confidence            77753 23379999988 8999887642    2468999987   7999999999999988653

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.92  E-value=9e-24  Score=208.62  Aligned_cols=274  Identities=10%  Similarity=0.095  Sum_probs=199.2

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC-CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcC
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKY  194 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~  194 (430)
                      ..++|+.+++++|++++ +|+++ +|++++++.++.+++++| |+|++..+++.++.  ..++..| +++.++..+  ++
T Consensus        60 ~~~lr~~la~~~~~~~~-~v~~~-~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~--~~  133 (356)
T 1fg7_A           60 PKAVIENYAQYAGVKPE-QVLVS-RGADEGIELLIRAFCEPGKDAILYCPPTYGMYS--VSAETIGVECRTVPTLD--NW  133 (356)
T ss_dssp             CHHHHHHHHHHHTSCGG-GEEEE-SHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHH--HHHHHHTCEEEECCCCT--TS
T ss_pred             HHHHHHHHHHHhCCChH-HEEEc-CCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHH--HHHHHcCCEEEEeeCCC--CC
Confidence            35888999999999865 77765 789999999999998899 99998777766643  3455667 766666542  23


Q ss_pred             CCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc---cCCCcEEEEeccCcCCCC--c-ccc-ccc--cEEEe
Q 043610          195 TKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA---KNSTGILVADMSSNFCSK--P-VDV-TRF--GVIYA  261 (430)
Q Consensus       195 g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~---~~~g~~lvvD~a~s~G~~--~-idl-~~~--d~~~~  261 (430)
                        .+|+++++  ++ ++++|++++++|+||.++|  ++.++   .++|+++++|++|+....  + .++ +..  ++++.
T Consensus       134 --~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~  210 (356)
T 1fg7_A          134 --QLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILR  210 (356)
T ss_dssp             --CCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEE
T ss_pred             --CCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEe
Confidence              46888876  66 8999999999999999999  45543   138999999999884331  1 222 223  47889


Q ss_pred             CCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610          262 GAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK  339 (430)
Q Consensus       262 s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l  339 (430)
                      |++|++|++|  +|++++++++++.+....              ...++|...+.++.++|+....+ .++...++++++
T Consensus       211 s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~--------------~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~  275 (356)
T 1fg7_A          211 TLSKAFALAGLRCGFTLANEEVINLLMKVI--------------APYPLSTPVADIAAQALSPQGIV-AMRERVAQIIAE  275 (356)
T ss_dssp             ESSSTTCCGGGCCEEEEECHHHHHHHHHHS--------------CSSCSCHHHHHHHHHHTSHHHHH-HHHHHHHHHHHH
T ss_pred             cchHhhcCchhhhEEEEeCHHHHHHHHHhc--------------CCCCCCHHHHHHHHHHhcCccHH-HHHHHHHHHHHH
Confidence            9999999888  799999998877643210              11256777777777777642111 267888999999


Q ss_pred             HHHHHHHHHccCC-ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC-CCC--CCCeeEEeecCCCCHHHH
Q 043610          340 AELLYNVIDGSNG-FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK-GHR--SVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       340 ~~~l~~~l~~~~G-~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~~--~~g~iRis~~~~~t~edv  415 (430)
                      ++++.+.|++..+ +...+   . .+ ..+.+.+++   ..++.+.|.++||.+.+ |..  ..+++|||++   +++|+
T Consensus       276 ~~~l~~~L~~~~~~~~~~~---~-~~-~~~~~~~~~---~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~  344 (356)
T 1fg7_A          276 REYLIAALKEIPCVEQVFD---S-ET-NYILARFKA---SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREES  344 (356)
T ss_dssp             HHHHHHHHHHSTTEEEECC---C-SS-SEEEEEETT---HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHH
T ss_pred             HHHHHHHHHhCCCceEECC---C-CC-eEEEEECCC---HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHHH
Confidence            9999999997433 33322   1 23 335566651   33789999999999877 642  2358999997   68999


Q ss_pred             HHHHHHHHHH
Q 043610          416 EKLVAFMKDF  425 (430)
Q Consensus       416 ~~ll~~L~~~  425 (430)
                      ++++++|+++
T Consensus       345 ~~~~~~l~~~  354 (356)
T 1fg7_A          345 QRVIDALRAE  354 (356)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHHhh
Confidence            9999999864

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.92  E-value=6.1e-24  Score=220.38  Aligned_cols=302  Identities=13%  Similarity=0.063  Sum_probs=200.3

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-------C-CCC------cEEEEeCChhHHHHHH
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-------T-PND------PVDYIVTGSWGDKAFK  175 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-------~-~gd------~vl~~~~g~~~~~~~~  175 (430)
                      ++.+.++.+++++.+++++|.+++ +++++ +|+|+++..++..+.       + +|+      +|++....+++..  .
T Consensus       143 s~~~~~le~~~~~~la~l~g~~~~-~~~~t-~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~--~  218 (515)
T 2jis_A          143 APVFVLMEEEVLRKLRALVGWSSG-DGIFC-PGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ--K  218 (515)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCSSC-EEEEE-SSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH--H
T ss_pred             chHHHHHHHHHHHHHHHHhCCCCC-CeEEc-CCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH--H
Confidence            577788889999999999999864 67765 789999887776652       2 465      4554444566532  3


Q ss_pred             HHHHhC----CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEeecCCCccccCC--CCccc-cCCCcEEEE
Q 043610          176 EAQKFC----NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVA  240 (430)
Q Consensus       176 ~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvv  240 (430)
                      .++..|    +++.++..+   .+ .+|+++|+  +++      ++++|++++++|++|.+.|  +|.++ +++|+++++
T Consensus       219 ~~~~~g~g~~~v~~v~~~~---~~-~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~v  294 (515)
T 2jis_A          219 GAAFLGLGTDSVRVVKADE---RG-KMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHV  294 (515)
T ss_dssp             HHHHTTSCGGGEEEECBCT---TS-CBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEE
T ss_pred             HHHHcCCCCCcEEEEecCC---CC-cCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEE
Confidence            334443    355566532   23 57888886  543      4899999999999999999  78886 689999999


Q ss_pred             eccCcCCCCccc-----cc---cccEEEeCCCcccc-CCccEEEEEcHH--HHhccCCCCCccc-cccch----hhcC--
Q 043610          241 DMSSNFCSKPVD-----VT---RFGVIYAGAQKNVG-PSGVTIVIVRKD--LLGNAQDKTPLML-DYKIH----DENN--  302 (430)
Q Consensus       241 D~a~s~G~~~id-----l~---~~d~~~~s~~K~~g-p~G~g~l~v~~~--~~~~~~~~~p~~~-~~~~~----~~~~--  302 (430)
                      |++++.+..+.+     +.   ..|++++++|||++ |.|+|+++++++  +++......+.|+ +....    .+.+  
T Consensus       295 D~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~  374 (515)
T 2jis_A          295 DAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDK  374 (515)
T ss_dssp             EETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGG
T ss_pred             ehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCC
Confidence            999998877654     43   44899999999996 999999999877  6554221122222 10000    0000  


Q ss_pred             CCCCC--ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC-----
Q 043610          303 SLYNT--PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS-----  375 (430)
Q Consensus       303 ~~~~T--~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~-----  375 (430)
                      ....+  .....++++   ++.+.. .|++++.++..++++++++.|++..|++++. ++  .. .+++|.+.+.     
T Consensus       375 ~~~~~rr~~al~~~~~---l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~-~~--~~-~~v~f~~~p~~~~~~  446 (515)
T 2jis_A          375 VVQCGRRVDCLKLWLM---WKAQGD-QGLERRIDQAFVLARYLVEEMKKREGFELVM-EP--EF-VNVCFWFVPPSLRGK  446 (515)
T ss_dssp             CSCSSCCCCHHHHHHH---HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSTTEEESS-CC--SS-SEEEEEECCGGGTTC
T ss_pred             CCCCCCcccHHHHHHH---HHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC-CC--Ce-eEEEEEEeCcccccc
Confidence            00000  112233333   443432 4789999999999999999999866898874 22  22 3577765211     


Q ss_pred             ----chhH-------HHHHHHHHcCCeecCC---CCCCCeeEEee-cCCCCHHHHHHHHHHHHHHHH
Q 043610          376 ----DLEA-------EFVKEAAKEKMVQLKG---HRSVGGMRASI-YNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       376 ----~~~~-------~~~~~L~~~Gi~~~~g---~~~~g~iRis~-~~~~t~edv~~ll~~L~~~~~  427 (430)
                          ....       ++.+.|.+.|+.....   ....+.+||++ +.++|++||+++++.|+++++
T Consensus       447 ~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~  513 (515)
T 2jis_A          447 QESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ  513 (515)
T ss_dssp             TTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence                1111       2556677778765321   11134799999 788999999999999998865

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.92  E-value=1.6e-24  Score=219.13  Aligned_cols=325  Identities=13%  Similarity=0.122  Sum_probs=219.7

Q ss_pred             CCCceeecCCCC----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C---CCCCcEE
Q 043610           68 EDRVFNFAAGPA----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N---IPQEYSV  136 (430)
Q Consensus        68 ~~~~~l~~~gp~----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g---~~~~~~v  136 (430)
                      .+.+++|+.|-.    ..++.+++++.+.+.+..   ..   ...++..  ....++|+.+++++    |   ++++ +|
T Consensus        42 ~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~---~~---~~~y~~~--~g~~~lr~~la~~l~~~~g~~~~~~~-~v  112 (425)
T 1vp4_A           42 DKDAISFGGGVPDPETFPRKELAEIAKEIIEKEY---HY---TLQYSTT--EGDPVLKQQILKLLERMYGITGLDED-NL  112 (425)
T ss_dssp             STTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSH---HH---HTSCCCT--TCCHHHHHHHHHHHHHHHCCCSCCGG-GE
T ss_pred             CCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcc---hh---hcCCCCC--CCCHHHHHHHHHHHHhccCCCCCCcc-cE
Confidence            345778876632    256789999988775411   00   1111110  01124445555555    8   4454 67


Q ss_pred             EEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------
Q 043610          137 LFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------  207 (430)
Q Consensus       137 v~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------  207 (430)
                      +++ +|++++++.++.+++++||+|++..+++.+.  ...++..| +++.++..+   .+  +|+++++  +++      
T Consensus       113 ~~t-~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~---~~--~d~~~l~~~l~~~~~~~~  184 (425)
T 1vp4_A          113 IFT-VGSQQALDLIGKLFLDDESYCVLDDPAYLGA--INAFRQYLANFVVVPLED---DG--MDLNVLERKLSEFDKNGK  184 (425)
T ss_dssp             EEE-EHHHHHHHHHHHHHCCTTCEEEEEESCCHHH--HHHHHTTTCEEEEEEEET---TE--ECHHHHHHHHHHHHHTTC
T ss_pred             EEe-ccHHHHHHHHHHHhCCCCCEEEEeCCCcHHH--HHHHHHcCCEEEEeccCC---CC--CCHHHHHHHHHhhhhccc
Confidence            765 7899999999999989999999888887664  34455677 777777642   22  6778776  444      


Q ss_pred             --CccEE-EEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Ccccccc-----ccEEEeCCCccccC
Q 043610          208 --DAKYL-HICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KPVDVTR-----FGVIYAGAQKNVGP  269 (430)
Q Consensus       208 --~~~lv-~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~idl~~-----~d~~~~s~~K~~gp  269 (430)
                        ++++| ++++++|+||.++|  +   |.++ +++|+++++|++|+.+.    .+.++..     .++++.|++|++| 
T Consensus       185 ~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-  263 (425)
T 1vp4_A          185 IKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-  263 (425)
T ss_dssp             GGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-
T ss_pred             CCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-
Confidence              78888 57899999999998  3   4444 58999999999988643    2233322     2478899999999 


Q ss_pred             Cc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 043610          270 SG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI  347 (430)
Q Consensus       270 ~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l  347 (430)
                      +|  +|++++++++++.+.....            ...++.|...++++..+|+.......++.+.++++++++++.+.|
T Consensus       264 ~G~r~G~~~~~~~~~~~l~~~~~------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L  331 (425)
T 1vp4_A          264 PGLRIGMVAGSKEFIRKIVQAKQ------------SADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNAL  331 (425)
T ss_dssp             GGGCEEEEECCHHHHHHHHHHHH------------HHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEEeeCHHHHHHHHHHhh------------hhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            78  6999999988776432000            011345777888888888752001246788888999999999999


Q ss_pred             Hcc-C---CceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHH
Q 043610          348 DGS-N---GFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       348 ~~~-~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~  416 (430)
                      .+. .   |+.+..  +  .....+.+.+++ +.+. ++.+.|.++||.+.+|..      ..+++|||++.. +++|++
T Consensus       332 ~~~~~~~~g~~~~~--~--~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~  405 (425)
T 1vp4_A          332 EEYFSDIPGVKWVK--S--EGGLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIV  405 (425)
T ss_dssp             HHHSTTSTTCEECC--C--SBSSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHH
T ss_pred             HHhCCCCCceEEec--C--CccEEEEEEcCC-CCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHH
Confidence            863 2   576542  1  122356677764 2223 688888888999876532      235799999864 899999


Q ss_pred             HHHHHHHHHHHh
Q 043610          417 KLVAFMKDFQAK  428 (430)
Q Consensus       417 ~ll~~L~~~~~~  428 (430)
                      ++++.|++++++
T Consensus       406 ~~l~~l~~~l~~  417 (425)
T 1vp4_A          406 EGIKRLREVVLE  417 (425)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999988754

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.92  E-value=1.2e-23  Score=214.54  Aligned_cols=327  Identities=11%  Similarity=0.070  Sum_probs=220.7

Q ss_pred             CCCceeecCCCC----CCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCC-CCCcEEEEEe
Q 043610           68 EDRVFNFAAGPA----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNI-PQEYSVLFLQ  140 (430)
Q Consensus        68 ~~~~~l~~~gp~----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~-~~~~~vv~~~  140 (430)
                      .+.+++|+.|-.    .+++.+.+++.+.+.+..   ..   ..+++  ....++.+.+.+.+++.+|. +++ +|+++ 
T Consensus        75 ~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~---~~---~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~v~~t-  146 (448)
T 3aow_A           75 TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYA---DK---ALQYGTTKGFTPLRETLMKWLGKRYGISQDN-DIMIT-  146 (448)
T ss_dssp             TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSH---HH---HHSCCCTTCCHHHHHHHHHHHHHHHCCCTTS-EEEEE-
T ss_pred             CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhh---HH---HhCCCCCCCcHHHHHHHHHHHHHhcCcCChh-hEEEe-
Confidence            346788877642    156788888888775310   00   01111  11222333333444344498 444 77664 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC----C--CccE
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN----P--DAKY  211 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~----~--~~~l  211 (430)
                      +|++++++.++..++++||+|++..+++.+.  ...++..| +++.++..+   .|  +|+++|+  ++    +  ++++
T Consensus       147 ~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~--~~~~~~~g~~~~~v~~~~---~g--~d~~~L~~~l~~~~~~~~~~k~  219 (448)
T 3aow_A          147 SGSQQALDLIGRVFLNPGDIVVVEAPTYLAA--LQAFNFYEPQYIQIPLDD---EG--MKVEILEEKLKELKSQGKKVKV  219 (448)
T ss_dssp             SSHHHHHHHHHHHHCCTTCEEEEEESCCHHH--HHHHHTTCCEEEEEEEET---TE--ECHHHHHHHHHHHHHTTCCEEE
T ss_pred             CcHHHHHHHHHHHHcCCCCEEEEeCCChHHH--HHHHHHcCCEEEEeccCC---CC--CCHHHHHHHHhhhhccCCCCeE
Confidence            7899999999999999999999988877664  34455667 777777642   23  6788886  55    5  7898


Q ss_pred             E-EEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCC----ccccccc-----cEEEeCCCccccCCc--cE
Q 043610          212 L-HICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSK----PVDVTRF-----GVIYAGAQKNVGPSG--VT  273 (430)
Q Consensus       212 v-~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~----~idl~~~-----d~~~~s~~K~~gp~G--~g  273 (430)
                      | ++++++||||.+++     +|.++ +++|+++|+|++|+.+..    ..++..+     ++++.|++|++| +|  +|
T Consensus       220 v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG  298 (448)
T 3aow_A          220 VYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIG  298 (448)
T ss_dssp             EEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCE
T ss_pred             EEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEE
Confidence            7 46889999999998     34554 588999999999886432    1223222     378899999999 78  89


Q ss_pred             EEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-C-
Q 043610          274 IVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-N-  351 (430)
Q Consensus       274 ~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~-  351 (430)
                      ++++++++++.+....          ..  ...++|...+.++..+|+...-...++.++++++++++++.+.|++. . 
T Consensus       299 ~v~~~~~l~~~l~~~~----------~~--~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  366 (448)
T 3aow_A          299 WMVGDPGIIRKMEIAK----------QS--TDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPE  366 (448)
T ss_dssp             EEEECHHHHHHHHHHH----------HH--HHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred             EEEeCHHHHHHHHHHH----------HH--hcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999887643200          00  01245777777777777632001246778888889999999999863 3 


Q ss_pred             CceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      |+.+..  +  .....+.+.+++ +.+. ++.++|.++||.+.+|..      ..+++|||++. .++++++++++.|++
T Consensus       367 g~~~~~--p--~~g~~~~v~~~~-~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~  440 (448)
T 3aow_A          367 GVKWTK--P--EGGMFIWVTLPD-GIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAE  440 (448)
T ss_dssp             TCEECC--C--SBSSEEEEECST-TCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHH
T ss_pred             CeEEeC--C--CccEEEEEEcCC-CCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHH
Confidence            676542  2  122445677764 2333 799999888999877632      24579999885 489999999999999


Q ss_pred             HHHh
Q 043610          425 FQAK  428 (430)
Q Consensus       425 ~~~~  428 (430)
                      ++++
T Consensus       441 ~l~~  444 (448)
T 3aow_A          441 TIKE  444 (448)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.92  E-value=7.6e-24  Score=212.63  Aligned_cols=334  Identities=14%  Similarity=0.119  Sum_probs=221.0

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCc-HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG-KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~-~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +.+.+.+++.++++.|++++.+.+.+....+... .....+ .......+.+++.+++++|++++ +|+ ++ +||+++.
T Consensus        26 ~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~-~~-sGt~a~~  101 (417)
T 3n0l_A           26 EGLEMIASENFTLPEVMEVMGSILTNKYAEGYPG-KRYYGGCEFVDEIETLAIERCKKLFNCKFA-NVQ-PN-SGSQANQ  101 (417)
T ss_dssp             HSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECC-CS-SHHHHHH
T ss_pred             cCeeeecccCCCCHHHHHHHhhhhhccccccCCC-ccccccchHHHHHHHHHHHHHHHHhCCCCc-ceE-ec-cHHHHHH
Confidence            4566778888889999999998874422222110 011222 23344555688999999999763 454 44 4589999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHH-HHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAF-KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGV  223 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~-~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~  223 (430)
                      .++..++++||+|++..+++.+.... ......| ....++...+ +.+ .+|+++++  ++ +++++|+++++++  |.
T Consensus       102 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~-~~d~~~l~~~i~~~~~~~v~~~~~~~--G~  177 (417)
T 3n0l_A          102 GVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE-LDG-RIDYEKVREIAKKEKPKLIVCGASAY--AR  177 (417)
T ss_dssp             HHHHHHSCTTCEEEEECC----------------CCSEEEEECCC-TTS-SCCHHHHHHHHHHHCCSEEEECCSSC--CS
T ss_pred             HHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC-CCC-CcCHHHHHHHHHhcCCeEEEECCccc--Cc
Confidence            99999999999999887766553211 1112233 3434433221 122 47888887  55 6899999888664  99


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccccEEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRFGVIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLML  293 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~d~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~~  293 (430)
                      ..|  +|.++ +++|+++++|++|+.|..     +.++...|++++|+||++ |+.| |+++.+ +++.+.+.+.     
T Consensus       178 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~-----  251 (417)
T 3n0l_A          178 VIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSA-----  251 (417)
T ss_dssp             CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHH-----
T ss_pred             cCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhh-----
Confidence            999  78886 689999999999875543     444555689999999999 6877 999998 6776654210     


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                            ......++++...+.++..+++...+ .++++..++..++++++.+.|.+ .|+.+.. .. ... ..+.+.+.
T Consensus       252 ------~~~~~~~~~~~~~~aa~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~-~~~-~~~~~~~~  320 (417)
T 3n0l_A          252 ------IFPGIQGGPLMHVIAAKAVGFKFNLS-DEWKVYAKQVRTNAQVLANVLMD-RKFKLVS-DG-TDN-HLVLMSFL  320 (417)
T ss_dssp             ------HTTTTCSSCCHHHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-GS-CSS-SEEEEECT
T ss_pred             ------hCCcccCCcHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh-CCceecc-CC-CCc-eEEEEEcc
Confidence                  00112357777777887778776432 35788999999999999999997 7887763 11 122 34555665


Q ss_pred             CCchhH-HHHHHHHHcCCeecCCC----C----CCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610          374 KSDLEA-EFVKEAAKEKMVQLKGH----R----SVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       374 ~~~~~~-~~~~~L~~~Gi~~~~g~----~----~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.+. ++.+.|.++||.+..+.    .    ...++|+++...    .+++|+++++++|+++++.
T Consensus       321 ~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~  388 (417)
T 3n0l_A          321 DREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD  388 (417)
T ss_dssp             TSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence            433344 67778888999875321    0    124699997642    5789999999999998764

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.92  E-value=1.4e-23  Score=216.08  Aligned_cols=338  Identities=14%  Similarity=0.038  Sum_probs=219.7

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEEeC
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE--------YSVLFLQG  141 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~--------~~vv~~~~  141 (430)
                      +.+.+.+++...+..+.+++...+..   ...    ....++...++.+++++.+++++|.+.+        .++++ ++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~n~---~~~----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~-t~  146 (486)
T 1js3_A           75 YFFAYFPTASSYPAMLADMLCGAIGC---IGF----SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI-QG  146 (486)
T ss_dssp             TBCSSSCCCCCHHHHHHHHHHHHHCC---CCS----SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE-ES
T ss_pred             CceEeCCCCCCHHHHHHHHHHHHhCc---Ccc----ccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEE-cC
Confidence            34444455544555667777666521   111    1112466777788999999999999742        24566 48


Q ss_pred             cHHHHHHHHHhhcCC---C------CC--------c--EEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcc
Q 043610          142 GATTQFAAVPLNLCT---P------ND--------P--VDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFD  201 (430)
Q Consensus       142 gaT~a~~~~~~sl~~---~------gd--------~--vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~  201 (430)
                      |+|+|+..++..+..   +      ||        +  |++....|++  +.+.++..| +++.++...   . ..+|++
T Consensus       147 ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s--~~~~~~~~G~~v~~v~~d~---~-~~~d~~  220 (486)
T 1js3_A          147 SASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSS--VERAGLIGGVKLKAIPSDG---K-FAMRAS  220 (486)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHH--HHHHHHHHTCEEEEECCCT---T-SCCCHH
T ss_pred             CcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHH--HHHHHHhCCCceEEeecCC---C-CCCCHH
Confidence            899999887766421   1      43        4  3334455655  345566678 888887742   2 357999


Q ss_pred             ccc--cCCCcc------EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-c-------cccccEEEeC
Q 043610          202 ALE--QNPDAK------YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV-D-------VTRFGVIYAG  262 (430)
Q Consensus       202 ~l~--i~~~~~------lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i-d-------l~~~d~~~~s  262 (430)
                      +|+  ++++++      +|++++++|+||.+.|  +|.++ +++|+++++|++++.+.... +       +...|+++++
T Consensus       221 ~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~  300 (486)
T 1js3_A          221 ALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFN  300 (486)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEEC
T ss_pred             HHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEc
Confidence            987  666554      8999999999999988  78886 68999999999998766432 1       2345889999


Q ss_pred             CCcccc-CCccEEEEEcHHH--HhccCCCCCccccccch-----h--hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610          263 AQKNVG-PSGVTIVIVRKDL--LGNAQDKTPLMLDYKIH-----D--ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV  332 (430)
Q Consensus       263 ~~K~~g-p~G~g~l~v~~~~--~~~~~~~~p~~~~~~~~-----~--~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v  332 (430)
                      +|||++ |.|+|+++++++.  .+.+.. .+.|+.....     .  ......++... ...++..+++.+.. .|++++
T Consensus       301 ~hK~~~~p~~~G~l~~~~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~rr~-~~~~~~~al~~~g~-~g~~~~  377 (486)
T 1js3_A          301 PHKWLLVNFDCSAMWVKRRTDLTGAFKL-DPVYLKHSHQGSGLITDYRHWQLPLGRRF-RSLKMWFVFRMYGV-KGLQAY  377 (486)
T ss_dssp             HHHHSSCCSSCEEEEESCHHHHHGGGC-------------CCSCCCGGGSSSCSCCCC-THHHHHHHHHHHHH-HHHHHH
T ss_pred             hhhhcCCCcceEEEEEeCHHHHHHHhcC-CchhhCCCcccccCCCCccccCCCCCCch-hHHHHHHHHHHHhH-HHHHHH
Confidence            999996 8899999997653  344421 2223211000     0  00001111111 23445556665543 478999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-hhHHHHHHHHHcCCeecCCC--CCCCeeEEeec-C
Q 043610          333 EKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-LEAEFVKEAAKEKMVQLKGH--RSVGGMRASIY-N  408 (430)
Q Consensus       333 ~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-~~~~~~~~L~~~Gi~~~~g~--~~~g~iRis~~-~  408 (430)
                      .+++.++++++++.|.+..|++++. ++  . ..+++|.+++.. ...++.++|.++|++...+.  ...+.+|+++. .
T Consensus       378 ~~~~~~~a~~l~~~L~~~~~~~~~~-~~--~-~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~  453 (486)
T 1js3_A          378 IRKHVQLSHEFEAFVLQDPRFEVCA-EV--T-LGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSR  453 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTEEECS-CC--C-SSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCT
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEeC-CC--c-eeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCC
Confidence            9999999999999999866898863 22  2 346888886421 23478888988887643221  12347999974 4


Q ss_pred             CCCHHHHHHHHHHHHHHHHh
Q 043610          409 AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       409 ~~t~edv~~ll~~L~~~~~~  428 (430)
                      +++++||+++++.|++++++
T Consensus       454 ~~t~~di~~~~~~l~~~~~~  473 (486)
T 1js3_A          454 KVESGHVRLAWEHIRGLAAE  473 (486)
T ss_dssp             TCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence            68999999999999988653

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.92  E-value=1.1e-23  Score=211.07  Aligned_cols=328  Identities=12%  Similarity=0.067  Sum_probs=212.7

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHH--hC-CCCCcEEEEEeCcH
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRAL--LN-IPQEYSVLFLQGGA  143 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l--~g-~~~~~~vv~~~~ga  143 (430)
                      +.++.|+.|.  .++++.|++++.+.+.+.... ..   ...+++.  ....++|+.++++  +| ++++ +|+++ +|+
T Consensus        33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~---~~~y~~~--~g~~~lr~~la~~l~~g~~~~~-~v~~~-~G~  104 (400)
T 3asa_A           33 HTVINLSIGDTTQPLNASVAEAFASSIARLSSP-TT---CRGYGPD--FGLPALRQKLSEDFYRGFVDAK-EIFIS-DGA  104 (400)
T ss_dssp             SCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSS-SC---CCCCCCT--TCCHHHHHHHHHTTSTTSSCGG-GEEEE-SCH
T ss_pred             CceEeccCCCCCCCCCHHHHHHHHHHHhccccc-cc---ccCCCCC--CCCHHHHHHHHHHHHcCCCCHH-HEEEc-cCh
Confidence            3455555553  367889999999887653211 00   1112111  1234778888888  57 5554 77775 789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-C-ceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCc
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-N-PQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIH  221 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~-~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~t  221 (430)
                      +++++.++ .++++||+|++..+++.+..  ..++..| + +..++..++  .+..++   ++..+++++|++++++|||
T Consensus       105 ~~al~~~~-~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~--~~~~~~---l~~~~~~~~v~l~~p~npt  176 (400)
T 3asa_A          105 KVDLFRLL-SFFGPNQTVAIQDPSYPAYL--DIARLTGAKEIIALPCLQE--NAFFPE---FPEDTHIDILCLCSPNNPT  176 (400)
T ss_dssp             HHHHHHHH-HHHCSSCEEEEEESCCHHHH--HHHHHTTCSEEEEEECCGG--GTTCCC---CCTTCCCSEEEEESSCTTT
T ss_pred             HHHHHHHH-HHcCCCCEEEECCCCcHHHH--HHHHHcCCcceEecccchh--cCcccC---hhhccCccEEEEeCCCCCC
Confidence            99999864 55588999998888776643  4456678 7 777776431  111222   3311678999999999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCc-CC---CCcccccc----cc--EEEeCCCccccCCc--cEEEEEcHHHHh
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSN-FC---SKPVDVTR----FG--VIYAGAQKNVGPSG--VTIVIVRKDLLG  283 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s-~G---~~~idl~~----~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~  283 (430)
                      |.++|  +   |.++ +++|+++++|++|+ ++   ..+.++..    .|  +++.|++|++|++|  +|++++++++.+
T Consensus       177 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~  256 (400)
T 3asa_A          177 GTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTY  256 (400)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBC
T ss_pred             CCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhcc
Confidence            99999  3   4443 58999999999988 53   22333322    23  78899999999888  799999877631


Q ss_pred             ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCC
Q 043610          284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVR  363 (430)
Q Consensus       284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~r  363 (430)
                      ...........    ......++++|.+.+.++..+|+..    .++.+.++++++++++++.|.+ .|+++.+  + ..
T Consensus       257 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~-~~  324 (400)
T 3asa_A          257 ADGHFVIQDWE----RFLSTTFNGASIPAQEAGVAGLSIL----PQLEAIHYYRENSDLLRKALLA-TGFEVFG--G-EH  324 (400)
T ss_dssp             TTSCBHHHHHH----HHHHHHCCCCCHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHHHHH-TTCEEEE--C-SS
T ss_pred             chhhhHHHHHH----HHhccCccCCChHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHHHHHHH-CCCeeeC--C-CC
Confidence            10000000000    0000112467888888887777632    4678899999999999999997 5887653  1 12


Q ss_pred             ccceEEEE-cCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          364 SFMNVPFT-LEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       364 s~~iv~f~-~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      + ..+.+. +++ +.+. ++.+.|. ++||.+.+|..    ..+++|||+  ++++++++++++.|++++++
T Consensus       325 ~-~~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~  392 (400)
T 3asa_A          325 A-PYLWVKPTQA-NISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSS--LGKREDILAACERLQMAPAL  392 (400)
T ss_dssp             S-SEEEEECCCT-TCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEEC--CSCHHHHHHHHHHHHC----
T ss_pred             c-eEEEEeccCC-CCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEe--eCCHHHHHHHHHHHHHHHHh
Confidence            3 345667 653 2223 6887775 45999877642    135799994  56899999999999988764

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.92  E-value=1.6e-23  Score=209.89  Aligned_cols=327  Identities=13%  Similarity=0.068  Sum_probs=219.4

Q ss_pred             CCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCc
Q 043610           69 DRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGK--EFKSIIEKAESDLRALLNI--PQEYSVLFLQGG  142 (430)
Q Consensus        69 ~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~--~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~g  142 (430)
                      +.+++|+.|-  .++|+.|++++.+.+.+..        .+++..  ...+..+.+.+.+.+.+|.  +++.+|+++ +|
T Consensus        23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~-~g   93 (410)
T 3e2y_A           23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDN--------MNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVA-VG   93 (410)
T ss_dssp             TTSEECSSCCCCSCCCHHHHHHHHHHHTCGG--------GGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEE-SH
T ss_pred             CCeEEecCCCCCCCCCHHHHHHHHHHHhCcc--------ccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEe-CC
Confidence            4566666654  3578999999998875321        111111  1233334444555555554  331267765 89


Q ss_pred             HHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc-------CCCCCCccccc--cCCCccEE
Q 043610          143 ATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK-------YTKIPNFDALE--QNPDAKYL  212 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~-------~g~~~d~~~l~--i~~~~~lv  212 (430)
                      ++++++.++..++++||+|++..+.+.+..  ..++..| +++.++......       .+..+|+++++  +++++++|
T Consensus        94 ~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v  171 (410)
T 3e2y_A           94 AYGSLFNSIQGLVDPGDEVIIMVPFYDCYE--PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI  171 (410)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEE
T ss_pred             cHHHHHHHHHHhcCCCCEEEEeCCCchhhH--HHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEE
Confidence            999999999999999999998888776643  3456677 777776642100       11236777776  67889999


Q ss_pred             EEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCC----Cccccccc------cEEEeCCCccccCCc--cEE
Q 043610          213 HICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCS----KPVDVTRF------GVIYAGAQKNVGPSG--VTI  274 (430)
Q Consensus       213 ~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~----~~idl~~~------d~~~~s~~K~~gp~G--~g~  274 (430)
                      ++++++|+||.+++     +|.++ +++|+++++|++|+...    .+.++..+      .+++.|++|++|++|  +|+
T Consensus       172 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~  251 (410)
T 3e2y_A          172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGW  251 (410)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEE
T ss_pred             EEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEE
Confidence            99999999999987     35554 58899999999987532    22233222      278899999999778  899


Q ss_pred             EEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          275 VIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL-----ELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       275 l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~-----~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      ++.++++++.+..       .    .. ...++++...+.++..+|+...     ....++.+.++++++++++++.|++
T Consensus       252 ~~~~~~~~~~~~~-------~----~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  319 (410)
T 3e2y_A          252 SIGPAHLIKHLQT-------V----QQ-NSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNS  319 (410)
T ss_dssp             EECCHHHHHHHHH-------H----HH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEECHHHHHHHHH-------H----HH-hhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999988776421       0    00 1224667788888888886310     1235788899999999999999997


Q ss_pred             cCCceecCCCCCCCccceEEEEcCC--Cch---------hHHHHHHH-HHcCCeecCCCCC---------CCeeEEeecC
Q 043610          350 SNGFYKCPVEKSVRSFMNVPFTLEK--SDL---------EAEFVKEA-AKEKMVQLKGHRS---------VGGMRASIYN  408 (430)
Q Consensus       350 ~~G~~~~~~~~~~rs~~iv~f~~~~--~~~---------~~~~~~~L-~~~Gi~~~~g~~~---------~g~iRis~~~  408 (430)
                       .|+.+..  +  .....+.+.+..  .+.         +.+++++| +++||.+.+|...         .+++|||+..
T Consensus       320 -~g~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~  394 (410)
T 3e2y_A          320 -VGLKPIV--P--DGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK  394 (410)
T ss_dssp             -TTCEEEB--C--SBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC
T ss_pred             -CCCeecC--C--CccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC
Confidence             5887653  1  122334444432  111         12677765 6679998775421         3689999876


Q ss_pred             CCCHHHHHHHHHHHHHH
Q 043610          409 AMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       409 ~~t~edv~~ll~~L~~~  425 (430)
                        ++++++++++.|+++
T Consensus       395 --~~e~l~~~l~~l~~~  409 (410)
T 3e2y_A          395 --KDSTLDAAEEIFRAW  409 (410)
T ss_dssp             --CHHHHHHHHHHHHTC
T ss_pred             --CHHHHHHHHHHHHhc
Confidence              999999999998763

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.92  E-value=1.7e-23  Score=204.60  Aligned_cols=298  Identities=13%  Similarity=0.076  Sum_probs=210.6

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC---CCCCcEEEEEeCcHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN---IPQEYSVLFLQGGAT  144 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g---~~~~~~vv~~~~gaT  144 (430)
                      ..+.|..|-  .+.|+.|++++.+.+.+.   +     .+++...   ...++|+.++++++   ++++ +|+++ +|++
T Consensus        20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~---~-----~~~y~~~---~~~~lr~~la~~~~~~~~~~~-~v~~~-~G~~   86 (335)
T 1uu1_A           20 DKTYLALNENPFPFPEDLVDEVFRRLNSD---A-----LRIYYDS---PDEELIEKILSYLDTDFLSKN-NVSVG-NGAD   86 (335)
T ss_dssp             CSEEESSCCCSSCCCHHHHHHHHHTCCGG---G-----GGSCCCS---SCHHHHHHHHHHHTCSSCCGG-GEEEE-SSHH
T ss_pred             cceECCCCCCCCCCCHHHHHHHHHHhhhh---h-----hhcCCCC---chHHHHHHHHHHcCCCCCCHH-HEEEc-CChH
Confidence            334444432  467899999998876321   1     1112111   14588899999999   7665 77775 7899


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGV  223 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~  223 (430)
                      ++++.++..+   ||+|++. +++.+.  ...++..| +++.++..+  ++  .+|++++   +++++|++++++|+||.
T Consensus        87 ~al~~~~~~~---gd~Vl~~-p~y~~~--~~~~~~~g~~~~~v~~~~--~~--~~d~~~l---~~~~~v~l~~p~nptG~  153 (335)
T 1uu1_A           87 EIIYVMMLMF---DRSVFFP-PTYSCY--RIFAKAVGAKFLEVPLTK--DL--RIPEVNV---GEGDVVFIPNPNNPTGH  153 (335)
T ss_dssp             HHHHHHHHHS---SEEEECS-SSCHHH--HHHHHHHTCEEEECCCCT--TS--CCCCCCC---CTTEEEEEESSCTTTCC
T ss_pred             HHHHHHHHHh---CCcEEEC-CCcHHH--HHHHHHcCCeEEEeccCC--CC--CCCHHHc---CCCCEEEEeCCCCCCCC
Confidence            9999998887   8898877 666553  34556677 666666532  12  3566665   68999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCc-CCCCc-cc-cccc--cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSN-FCSKP-VD-VTRF--GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLML  293 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s-~G~~~-id-l~~~--d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~  293 (430)
                      ++|  ++.++ +..| ++++|++|+ ++..+ ++ ++..  ++++.|++|++|++|  +|++++++++++.+.+..    
T Consensus       154 ~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~----  228 (335)
T 1uu1_A          154 VFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR----  228 (335)
T ss_dssp             CCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHS----
T ss_pred             CCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhc----
Confidence            999  66665 4448 899999987 32211 23 2223  488999999999778  799999998877643200    


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                                ..+++|...++++..+|+..   ..++.+.++++++++++.+.|.+. |+++.+   . .+ ..+.+.++
T Consensus       229 ----------~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~---~-~~-~~~~~~~~  289 (335)
T 1uu1_A          229 ----------LPFNVSYVSQMFAKVALDHR---EIFEERTKFIVEERERMKSALREM-GYRITD---S-RG-NFVFVFME  289 (335)
T ss_dssp             ----------CTTCSCHHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC---C-CS-SEEEEECC
T ss_pred             ----------CCCCcCHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHHHHC-CcEEcC---C-CC-eEEEEECC
Confidence                      11477888888888888752   246788999999999999999874 776432   1 23 34567776


Q ss_pred             CCchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          374 KSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       374 ~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +  .+. ++.+.|.++||.+.++   .+++|||++   +.+|+++++++|+++
T Consensus       290 ~--~~~~~~~~~l~~~gi~v~~~---~~~iRis~~---~~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          290 K--EEKERLLEHLRTKNVAVRSF---REGVRITIG---KREENDMILRELEVF  334 (335)
T ss_dssp             T--HHHHHHHHHHHHHTEEEEEE---TTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred             C--CCHHHHHHHHHHCCEEEEEC---CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence            4  233 6888998899998762   357999986   578999999999764

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.92  E-value=1.5e-23  Score=207.54  Aligned_cols=322  Identities=11%  Similarity=0.017  Sum_probs=214.7

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      .+++++.|...+++ +++++.+.+...           .+++  ....+++++.+++++|.+   +++++ +|||+|++.
T Consensus         7 ~~~~l~~~~~~~~~-~~~~~~~~~~~~-----------~~~~--~~~~~~l~~~la~~~~~~---~~~~~-~~gt~a~~~   68 (374)
T 3uwc_A            7 PYSYLERQFADIEP-YLNDLREFIKTA-----------DFTL--GAELEKFEKRFAALHNAP---HAIGV-GTGTDALAM   68 (374)
T ss_dssp             CSCCHHHHTSSCHH-HHHHHHHHHHHT-----------CCSS--CHHHHHHHHHHHHHTTCS---EEEEE-SCHHHHHHH
T ss_pred             eeeccccCCCCchH-HHHHHHHHHHcC-----------Cccc--ChhHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHH
Confidence            35677777767777 888888776531           1111  134568899999999986   56665 788999999


Q ss_pred             HHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccC
Q 043610          150 VPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEF  225 (430)
Q Consensus       150 ~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~  225 (430)
                      ++.++ +++||+|++....+.+..  ..++..| +++.++...    +..+|+++++  +++++++|+   ++|+||.+.
T Consensus        69 ~~~~~~~~~gd~v~~~~~~~~~~~--~~~~~~g~~~~~~~~~~----~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~  139 (374)
T 3uwc_A           69 SFKMLNIGAGDEVITCANTFIASV--GAIVQAGATPVLVDSEN----GYVIDPEKIEAAITDKTKAIM---PVHYTGNIA  139 (374)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHH--HHHHHTTCEEEEECBCT----TSSBCGGGTGGGCCTTEEEEC---CBCGGGCCC
T ss_pred             HHHHcCCCCCCEEEECCCccHHHH--HHHHHcCCEEEEEecCC----CCCcCHHHHHHhCCCCceEEE---EeCCcCCcC
Confidence            99999 899999998887776643  3456677 777777642    2247888887  678888877   667999999


Q ss_pred             C--CCccc-cCCCcEEEEeccCcCCCCcccccc----ccEEEeCCC--ccccCCc-cEEEEEcH-HHHhccCCCCCcccc
Q 043610          226 K--EYPSA-KNSTGILVADMSSNFCSKPVDVTR----FGVIYAGAQ--KNVGPSG-VTIVIVRK-DLLGNAQDKTPLMLD  294 (430)
Q Consensus       226 p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~----~d~~~~s~~--K~~gp~G-~g~l~v~~-~~~~~~~~~~p~~~~  294 (430)
                      |  +|.++ +++|+++++|++|+.|.. ++...    .|+++.|+|  |++|+.| .|+++.++ ++.+.+.......  
T Consensus       140 ~~~~i~~~~~~~~~~li~D~~~~~g~~-~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~--  216 (374)
T 3uwc_A          140 DMPALAKIAKKHNLHIVEDACQTILGR-INDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHG--  216 (374)
T ss_dssp             CHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTT--
T ss_pred             CHHHHHHHHHHcCCEEEEeCCCccCce-eCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcC--
Confidence            9  78886 689999999999998865 33222    278888977  9998644 57777654 4544432111000  


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC-ceecCCCCCCCccc--eEEEE
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG-FYKCPVEKSVRSFM--NVPFT  371 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G-~~~~~~~~~~rs~~--iv~f~  371 (430)
                      ....... .. .+.+. .+..+..++.... ..+++++.++.+++++++++.|.+..+ +.+.. .+......  .+.+.
T Consensus       217 ~~~~~~~-~~-~~~~~-~~~~~~aa~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~  291 (374)
T 3uwc_A          217 LINRDVC-VE-YGINC-RMDTIQAVIANRL-MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPV-RREGVYHVFHIYVLR  291 (374)
T ss_dssp             EEETTEE-SS-CCCBC-BCCHHHHHHHHHH-GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCC-CCTTEECCCSSEEEE
T ss_pred             ccccCcc-cc-ccccC-CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCeEEecc-CCCCCceeeEEEEEE
Confidence            0000000 00 11111 1122333333332 346788999999999999999997555 66542 22222221  23333


Q ss_pred             cCCCchhHHHHHHHHHcCCeecCCCC-------------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          372 LEKSDLEAEFVKEAAKEKMVQLKGHR-------------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~-------------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .+   ...++.+.|.++||.+.+++.                         ..+.+|++++.++|++||++++++|++++
T Consensus       292 ~~---~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l  368 (374)
T 3uwc_A          292 VK---YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFY  368 (374)
T ss_dssp             ET---THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred             cC---CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence            32   123789999999998766540                         01479999999999999999999999998


Q ss_pred             Hhh
Q 043610          427 AKH  429 (430)
Q Consensus       427 ~~~  429 (430)
                      +++
T Consensus       369 ~~~  371 (374)
T 3uwc_A          369 LEK  371 (374)
T ss_dssp             HTT
T ss_pred             Hhh
Confidence            754

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.91  E-value=3.9e-23  Score=213.72  Aligned_cols=302  Identities=12%  Similarity=0.030  Sum_probs=202.7

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHHHHHHHHHhhcCC--------CC-----C-cEEEEeCChhHHHH
Q 043610          110 GKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGATTQFAAVPLNLCT--------PN-----D-PVDYIVTGSWGDKA  173 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT~a~~~~~~sl~~--------~g-----d-~vl~~~~g~~~~~~  173 (430)
                      ++...++.+++++.+++++|.+  .+ +++++ +|+|+++..++..+..        +|     + .|++....+++.. 
T Consensus       127 ~~~~~~le~~~~~~la~~~g~~~~~~-~~~~t-~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~-  203 (504)
T 2okj_A          127 APVFVLMEQITLKKMREIVGWSSKDG-DGIFS-PGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK-  203 (504)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCCSSSC-EEEEE-SSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred             ChHHHHHHHHHHHHHHHHhCCCCCCC-CEEEe-CCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH-
Confidence            4566677778889999999998  44 66665 7899999988777631        46     5 4554445666532 


Q ss_pred             HHHHHHhC----CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEeecCCCccccCC--CCccc-cCCCcEE
Q 043610          174 FKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHICANETIHGVEFK--EYPSA-KNSTGIL  238 (430)
Q Consensus       174 ~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~l  238 (430)
                       +.++..|    +++.++..+   .+ .+|+++|+  +++      ++++|++++++|+||.+.|  +|.++ +++|+++
T Consensus       204 -~~~~~~g~g~~~v~~v~~~~---~~-~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~l  278 (504)
T 2okj_A          204 -KAGAALGFGTDNVILIKCNE---RG-KIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWL  278 (504)
T ss_dssp             -HHHHHTTSCGGGEEEECBCT---TS-CBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEE
T ss_pred             -HHHHHcCCCcccEEEEecCC---CC-CCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEE
Confidence             2333333    455666532   23 57888887  544      5899999999999999999  78886 6899999


Q ss_pred             EEeccCcCCCCc-----ccc---ccccEEEeCCCcccc-CCccEEEEEcHH-HHhccCCCCCccc-c----------ccc
Q 043610          239 VADMSSNFCSKP-----VDV---TRFGVIYAGAQKNVG-PSGVTIVIVRKD-LLGNAQDKTPLML-D----------YKI  297 (430)
Q Consensus       239 vvD~a~s~G~~~-----idl---~~~d~~~~s~~K~~g-p~G~g~l~v~~~-~~~~~~~~~p~~~-~----------~~~  297 (430)
                      +||++++.+...     .++   ...|++++++|||+| |.|+|+++++++ +++......+.|+ +          +..
T Consensus       279 hvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  358 (504)
T 2okj_A          279 HVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGD  358 (504)
T ss_dssp             EEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGG
T ss_pred             EEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCccc
Confidence            999999877653     233   345899999999996 999999999874 5553211122222 1          100


Q ss_pred             h-hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc
Q 043610          298 H-DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       298 ~-~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~  376 (430)
                      . .+.+.+.   ....++++..++   .. .|++++.++..++++++++.|++..|++++...++  ...+++|.+.+..
T Consensus       359 ~~~~~~rr~---~~l~~~a~l~~l---g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p--~~~~v~f~~~~~~  429 (504)
T 2okj_A          359 KAIQCGRHV---DIFKFWLMWKAK---GT-VGFENQINKCLELAEYLYAKIKNREEFEMVFNGEP--EHTNVCFWYIPQS  429 (504)
T ss_dssp             GSSCSSCBC---CHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCC--SSSCEEEEECCGG
T ss_pred             CCCCCCCCc---cHHHHHHHHHHh---hH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCC--CeEEEEEEEeCcc
Confidence            0 0111111   233444443333   32 37899999999999999999997668988631112  2346778753211


Q ss_pred             ----------------hhHHHHHHHHHcCCeecCCC--CC-CCeeEEeec-CCCCHHHHHHHHHHHHHHHHh
Q 043610          377 ----------------LEAEFVKEAAKEKMVQLKGH--RS-VGGMRASIY-NAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       377 ----------------~~~~~~~~L~~~Gi~~~~g~--~~-~g~iRis~~-~~~t~edv~~ll~~L~~~~~~  428 (430)
                                      ...++.++|.++|++...+.  .. .+.+||+++ .+++++||+++++.|++++++
T Consensus       430 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~  501 (504)
T 2okj_A          430 LRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD  501 (504)
T ss_dssp             GSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence                            02257888888896543211  11 247999997 789999999999999998753

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.91  E-value=2.4e-23  Score=207.80  Aligned_cols=328  Identities=9%  Similarity=0.008  Sum_probs=212.6

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ++++++..|...+++.+++++.+.+...+         ..   .......++|+.+++++|.+   +++++ +|||+|++
T Consensus        22 ~~~~~l~~~~p~~~~~~~~a~~~~~~~~~---------~~---~~~~~~~~l~~~la~~~~~~---~~i~~-~~gt~al~   85 (391)
T 3dr4_A           22 SDLPRISVAAPRLDGNERDYVLECMDTTW---------IS---SVGRFIVEFEKAFADYCGVK---HAIAC-NNGTTALH   85 (391)
T ss_dssp             ------CCCCCCCCSSHHHHHHHHHHHTC---------CS---SCSHHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHH
T ss_pred             CCCceeccCCCCCCHHHHHHHHHHHHcCC---------cc---CCChHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHH
Confidence            45777888887888999999988775311         01   01134568999999999987   56665 78899999


Q ss_pred             HHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc
Q 043610          149 AVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       149 ~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~  224 (430)
                      .++.++ +++||+|++...++.+..  ..++..| +++.++...   .+..+|+++++  +++++++|++   +|+||..
T Consensus        86 ~~l~~~~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~~~~~~~~v~~---~n~tG~~  157 (391)
T 3dr4_A           86 LALVAMGIGPGDEVIVPSLTYIASA--NSVTYCGATPVLVDNDP---RTFNLDAAKLEALITPRTKAIMP---VHLYGQI  157 (391)
T ss_dssp             HHHHHHTCCTTCEEEEESSSCTHHH--HHHHHTTCEEEEECBCT---TTCSBCGGGSGGGCCTTEEEECC---BCGGGCC
T ss_pred             HHHHHcCCCCcCEEEECCCchHHHH--HHHHHCCCEEEEEecCc---cccCcCHHHHHHhcCCCceEEEE---ECCCCCh
Confidence            999999 899999998887777653  3455677 777777653   12247888887  6788888874   4699999


Q ss_pred             CC--CCccc-cCCCcEEEEeccCcCCCCccc--cccc-cE--EEeCCCccccCCccEEEEEcH-HHHhccCCCCCccccc
Q 043610          225 FK--EYPSA-KNSTGILVADMSSNFCSKPVD--VTRF-GV--IYAGAQKNVGPSGVTIVIVRK-DLLGNAQDKTPLMLDY  295 (430)
Q Consensus       225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~~id--l~~~-d~--~~~s~~K~~gp~G~g~l~v~~-~~~~~~~~~~p~~~~~  295 (430)
                      .|  +|.++ +++|+++++|++|+.|....+  ...+ |+  +.++.||++++...|+++.++ ++.+.+.....  ...
T Consensus       158 ~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~--~g~  235 (391)
T 3dr4_A          158 CDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRG--QGM  235 (391)
T ss_dssp             CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHB--TTC
T ss_pred             hhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHh--cCC
Confidence            98  78886 689999999999998876433  2222 44  445578999642247777654 45444321000  000


Q ss_pred             cc-hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC--CC-CCCccceEEEE
Q 043610          296 KI-HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV--EK-SVRSFMNVPFT  371 (430)
Q Consensus       296 ~~-~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~--~~-~~rs~~iv~f~  371 (430)
                      .. ........+...  .+..+.+++.+.. ..+++++.++.+++++++++.|.+. |+.+...  .. ......++.+.
T Consensus       236 ~~~~~~~~~~~g~~~--~~~~l~aa~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~  311 (391)
T 3dr4_A          236 DPNRRYWFPIVGFNY--RMTNIQAAIGLAQ-LERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVR  311 (391)
T ss_dssp             CTTSTTCCSSCCCBC--BCCHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEE
T ss_pred             CCCCccccccccccc--CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEE
Confidence            00 000000001000  1112222333222 2368889999999999999999985 8776542  11 12233345666


Q ss_pred             cCCC-chhH-HHHHHHHHcCCeecCCCC----------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          372 LEKS-DLEA-EFVKEAAKEKMVQLKGHR----------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       372 ~~~~-~~~~-~~~~~L~~~Gi~~~~g~~----------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +++. +.+. ++.+.|.++||.+.++..                      ..+.+|++++.++|++||++++++|++++
T Consensus       312 ~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          312 LGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             ECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred             ECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence            6641 2233 799999999998766531                      02369999999999999999999998754

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.91  E-value=1.4e-22  Score=207.97  Aligned_cols=328  Identities=12%  Similarity=0.015  Sum_probs=217.4

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc----C
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL----C  155 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl----~  155 (430)
                      ...+.+++++.+.+..     ..++.....++.+.++++++++.+++++|.+.  . +++++|+++++..++..+    .
T Consensus        77 ~~~p~v~~~~~~~~~~-----~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~--~-~~~~~ggt~a~~~al~~~~~~~~  148 (474)
T 1wyu_B           77 KYNPKLHEEAARLFAD-----LHPYQDPRTAQGALRLMWELGEYLKALTGMDA--I-TLEPAAGAHGELTGILIIRAYHE  148 (474)
T ss_dssp             CCCCHHHHHHHHTTSS-----CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE--E-ECCCSSHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHh-----cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc--e-eecChHHHHHHHHHHHHHHHHHH
Confidence            3445677777665321     11211111357778899999999999999974  3 445689999998754443    2


Q ss_pred             CCCC-----cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc-CC
Q 043610          156 TPND-----PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE-FK  226 (430)
Q Consensus       156 ~~gd-----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~-~p  226 (430)
                      ++||     +|++..+.|.+..  ..++..| +++.++..+   .+ .+|+++|+  +++++++|+++++ |++|.+ .+
T Consensus       149 ~~Gd~~~r~~Vlv~~~~h~~~~--~~~~~~G~~vv~v~~~~---~~-~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~  221 (474)
T 1wyu_B          149 DRGEGRTRRVVLVPDSAHGSNP--ATASMAGYQVREIPSGP---EG-EVDLEALKRELGPHVAALMLTNP-NTLGLFERR  221 (474)
T ss_dssp             HTTCTTTCCEEEEETTSCTHHH--HHHHHTTCEEEEECBCT---TS-SBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTT
T ss_pred             hcCCccCCCEEEEeCCcChhhH--HHHHHCCCEEEEecCCC---CC-CcCHHHHHHhhCCCceEEEEECC-CCCcccCCC
Confidence            4777     8887665554432  3455667 887787642   23 57888887  7889999999986 579998 46


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCC-cccccc--ccEEEeCCCcccc-CC-----ccEEEEEcHHHHhccCCC------
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSK-PVDVTR--FGVIYAGAQKNVG-PS-----GVTIVIVRKDLLGNAQDK------  288 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~-~idl~~--~d~~~~s~~K~~g-p~-----G~g~l~v~~~~~~~~~~~------  288 (430)
                        +|.++ +++|+++++|++|+.+.. .++..+  .|++++|+||+++ |.     |+|++++++++++.+...      
T Consensus       222 l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g  301 (474)
T 1wyu_B          222 ILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGE  301 (474)
T ss_dssp             HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECS
T ss_pred             HHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccC
Confidence              67776 688999999999975554 333333  3799999999996 64     599999999887765310      


Q ss_pred             CCccccccchhh-cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          289 TPLMLDYKIHDE-NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       289 ~p~~~~~~~~~~-~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..+++++..... .....++.+...+.++..+++.+.. .+++++.++..++++++++.|.+ .|+++.. ... ... .
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~-~~l~~~~~~~~~~~~~l~~~L~~-~g~~~~~-~~~-~~~-~  376 (474)
T 1wyu_B          302 EGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGL-EGLKKAAALAVLNARYLKELLKE-KGYRVPY-DGP-SMH-E  376 (474)
T ss_dssp             SCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-TTCBCSS-CSS-CCS-C
T ss_pred             CeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh-cCcEecC-CCC-cce-E
Confidence            011122110000 0112235666666666666654432 36788899999999999999997 4887632 111 111 1


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecC-CCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLK-GHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +.+.++......++.++|.++||.... ...  ..+.+||++..+++++|+++++++|+++++
T Consensus       377 ~~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~  439 (474)
T 1wyu_B          377 FVAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK  439 (474)
T ss_dssp             EEEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCCCCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence            233443211233799999999997421 111  245799999999999999999999998865

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.91  E-value=1.5e-23  Score=207.91  Aligned_cols=322  Identities=13%  Similarity=0.030  Sum_probs=208.0

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      .++++.++.++++.+++++.+.+...+         ...+    ...+++|+.+++++|.+   +++++ +|||+|++.+
T Consensus         5 ~~~l~~~~~~~~~~~~~a~~~~~~~~~---------~~~~----~~~~~l~~~la~~~~~~---~~i~~-~sgt~al~~~   67 (373)
T 3frk_A            5 FASFKPMHDEIEYEIKFKFEEIYKRNW---------FILG----DEDKKFEQEFADYCNVN---YCIGC-GNGLDALHLI   67 (373)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHTC---------CSSS----HHHHHHHHHHHHHHTSS---EEEEE-SCHHHHHHHH
T ss_pred             ccCCCcccCCCCHHHHHHHHHHHHCCC---------ccCC----chHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHH
Confidence            344555555677888888888765311         0111    34668999999999986   56775 7899999999


Q ss_pred             Hhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC
Q 043610          151 PLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       151 ~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      +.++ +++||+|++....+.+..  ..++..| +++.++..+   .+..+|+++++  +++++++|+   ++|+||...|
T Consensus        68 l~~l~~~~gd~Vi~~~~~~~~~~--~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~  139 (373)
T 3frk_A           68 LKGYDIGFGDEVIVPSNTFIATA--LAVSYTGAKPIFVEPDI---RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD  139 (373)
T ss_dssp             HHHTTCCTTCEEEEETTSCTHHH--HHHHHHSCEEEEECEET---TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC
T ss_pred             HHHcCCCCcCEEEECCCCcHHHH--HHHHHcCCEEEEEeccc---cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc
Confidence            9999 899999998887777643  3455668 777777642   12246888887  778898888   4468999998


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCCcccccc----ccEEEeC--CCccccCCc-cEEEEEc-HHHHhccCCCCCccccc
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSKPVDVTR----FGVIYAG--AQKNVGPSG-VTIVIVR-KDLLGNAQDKTPLMLDY  295 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~~idl~~----~d~~~~s--~~K~~gp~G-~g~l~v~-~~~~~~~~~~~p~~~~~  295 (430)
                        +|.++ +++|+++++|++|++|.. ++...    .|++++|  .||++|+.| .|+++.+ +++.+.+......  ..
T Consensus       140 l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~--g~  216 (373)
T 3frk_A          140 MDEIKRIAKKYNLKLIEDAAQAHGSL-YKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNY--GS  216 (373)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBT--TC
T ss_pred             HHHHHHHHHHcCCEEEEECCcccCCE-ECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhc--Cc
Confidence              78886 688999999999998876 44333    2677777  669998644 5667765 4454443210000  00


Q ss_pred             cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc--ceEEEEcC
Q 043610          296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF--MNVPFTLE  373 (430)
Q Consensus       296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~--~iv~f~~~  373 (430)
                      .. .......|...  .+..+.+++.... ..+++++.++.+++++++++.|.+ .++.+.. .+.....  ..+.+..+
T Consensus       217 ~~-~~~~~~~g~~~--~~~~~~aa~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~~~~~~~~~~~~~~~~  290 (373)
T 3frk_A          217 EK-KYHHIYKGFNS--RLDELQAGFLRVK-LKYLDKWNEERRKIAQKYIAGINN-PNVIIPV-EADYAKHVWYTFVIRSE  290 (373)
T ss_dssp             SB-TTBCCSCCCBC--CCCHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHCCC-TTEECCC-CCTTEECCCSSEEEEES
T ss_pred             cc-CCccccccccC--CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcc-CceEecc-CCCCCceeeEEEEEEeC
Confidence            00 00000111100  1112222333222 236788999999999999999986 4555432 2211111  22333332


Q ss_pred             CCchhHHHHHHHHHcCCeecCCCC-----------------C--------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          374 KSDLEAEFVKEAAKEKMVQLKGHR-----------------S--------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       374 ~~~~~~~~~~~L~~~Gi~~~~g~~-----------------~--------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                         ...++.+.|.++||.+..++.                 .        .+.+|++++.++|++||++++++|++...+
T Consensus       291 ---~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~  367 (373)
T 3frk_A          291 ---KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE  367 (373)
T ss_dssp             ---SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred             ---CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence               123789999999998764330                 0        146999999999999999999999987665


Q ss_pred             h
Q 043610          429 H  429 (430)
Q Consensus       429 ~  429 (430)
                      |
T Consensus       368 ~  368 (373)
T 3frk_A          368 H  368 (373)
T ss_dssp             -
T ss_pred             h
Confidence            4

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.91  E-value=1e-23  Score=206.80  Aligned_cols=309  Identities=12%  Similarity=0.055  Sum_probs=204.8

Q ss_pred             CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      .+.+.++.|++++.+.+..     .    ...++  .....+++++.+++++| ++ .+++++ +|+|+++..++..+.+
T Consensus        16 ~~~~~~~~v~~a~~~~~~~-----~----~~~~~--~~~~~~~l~~~la~~~g-~~-~~v~~~-~~gt~a~~~al~~~~~   81 (356)
T 1v72_A           16 NIAGASPEVAQALVKHSSG-----Q----AGPYG--TDELTAQVKRKFCEIFE-RD-VEVFLV-PTGTAANALCLSAMTP   81 (356)
T ss_dssp             GGCCCCHHHHHHHHHTTSS-----C----CCSTT--CSHHHHHHHHHHHHHHT-SC-CEEEEE-SCHHHHHHHHHHTSCC
T ss_pred             CccCCCHHHHHHHHhhccC-----c----ccccc--cchHHHHHHHHHHHHhC-CC-CcEEEe-CCccHHHHHHHHHhcC
Confidence            3456789999999886521     0    01111  12446789999999999 43 267765 7899999999999888


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHh--C-CceEEecCCCCcCCCCCCccccc---cCC-------CccEEEEeecCCCccc
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKF--C-NPQVIWSGKAEKYTKIPNFDALE---QNP-------DAKYLHICANETIHGV  223 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~--g-~~~~v~~~~~~~~g~~~d~~~l~---i~~-------~~~lv~i~~~~t~tG~  223 (430)
                      +||+|++..+.+++......+...  | +++.++..    .+ .+|+++++   +++       ++++|+++++++ ||.
T Consensus        82 ~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~-~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~  155 (356)
T 1v72_A           82 PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP----AA-KLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGS  155 (356)
T ss_dssp             TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG----GG-CCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSC
T ss_pred             CCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC----CC-eEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCc
Confidence            999988766555543211013445  7 66656542    22 46777663   333       689999999765 999


Q ss_pred             cCC-----CCccc-cCCCcEEEEeccCcCC------CCcccc---ccccEEEeCCCccccCCccEEEEEcHHHHhccCCC
Q 043610          224 EFK-----EYPSA-KNSTGILVADMSSNFC------SKPVDV---TRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       224 ~~p-----ei~~~-~~~g~~lvvD~a~s~G------~~~idl---~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~  288 (430)
                      +++     +|.++ +++|+++++|+++..+      ..+..+   ...|+++.|+||+.+|.|+|+++.++++++.+.. 
T Consensus       156 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~~-  234 (356)
T 1v72_A          156 IYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSY-  234 (356)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHHH-
T ss_pred             cCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCccEEEEECHHHHhhHHH-
Confidence            887     35554 5899999999998632      122122   1457888999999448888899999888765421 


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                         ...     ..    ++.+.....++..+++.+. ...++...++..++++++++.|.+..|+++..  + ..+. .+
T Consensus       235 ---~~~-----~~----~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~-~~~~-~~  297 (356)
T 1v72_A          235 ---RRK-----RA----GHLSSKMRFLSAQIDAYLT-DDLWLRNARKANAAAQRLAQGLEGLGGVEVLG--G-TEAN-IL  297 (356)
T ss_dssp             ---HHH-----HT----TCCCSSTHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEES--C-CCSS-EE
T ss_pred             ---Hhh-----cc----CchhhhHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEcc--C-CCcc-EE
Confidence               000     01    1111112233334455443 23356678888999999999998756887652  2 1232 34


Q ss_pred             EEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       369 ~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.++     .++.++|.++||.+.+|....+.+||+++.+++++|++++++.|++++++
T Consensus       298 ~~~~~-----~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~  352 (356)
T 1v72_A          298 FCRLD-----SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLAADR  352 (356)
T ss_dssp             EEEEC-----HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred             EEEcC-----HHHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            45554     26888998999998866422468999999899999999999999987654

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.91  E-value=1.4e-22  Score=201.97  Aligned_cols=318  Identities=11%  Similarity=0.029  Sum_probs=211.6

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd  159 (430)
                      +++.+++++.+.+..    +.    .++..   ....+++|+.+++++|.+.  . ++++ +||++++.++.++ +++||
T Consensus        15 ~~~~~~~a~~~~l~~----~~----~~~~~---~~~~~~l~~~la~~~~~~~--~-i~~~-sGt~al~~~l~~l~~~~gd   79 (388)
T 1b9h_A           15 YDDAERNGLVRALEQ----GQ----WWRMG---GDEVNSFEREFAAHHGAAH--A-LAVT-NGTHALELALQVMGVGPGT   79 (388)
T ss_dssp             CCHHHHHHHHHHHHT----SC----CBTTT---CSHHHHHHHHHHHHTTCSE--E-EEES-CHHHHHHHHHHHTTCCTTC
T ss_pred             CCHHHHHHHHHHHHc----CC----eeecC---CHHHHHHHHHHHHHhCCCe--E-EEeC-CHHHHHHHHHHHcCCCCcC
Confidence            458999999988753    11    01111   1345689999999999862  4 4554 4699999999998 88999


Q ss_pred             cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC
Q 043610          160 PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN  233 (430)
Q Consensus       160 ~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~  233 (430)
                      +|++...++.+..  ..++..| +++.++..++   +..+|+++++  +++++++|+   ++|+||.+.|  +|.++ ++
T Consensus        80 ~Vi~~~~~~~~~~--~~~~~~g~~~~~v~~~~~---~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~  151 (388)
T 1b9h_A           80 EVIVPAFTFISSS--QAAQRLGAVTVPVDVDAA---TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISAD  151 (388)
T ss_dssp             EEEEESSSCTHHH--HHHHHTTCEEEEECBCTT---TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHH
T ss_pred             EEEECCCccHHHH--HHHHHcCCEEEEEecCCC---cCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHH
Confidence            9998887777653  3456678 7777776431   1247888887  788888877   6788999999  78886 68


Q ss_pred             CCcEEEEeccCcCCCCc--cccccc---cEEEeCCCcccc-CCccEEEEEcHH-H--HhccCCCCCccccccchhhcCCC
Q 043610          234 STGILVADMSSNFCSKP--VDVTRF---GVIYAGAQKNVG-PSGVTIVIVRKD-L--LGNAQDKTPLMLDYKIHDENNSL  304 (430)
Q Consensus       234 ~g~~lvvD~a~s~G~~~--idl~~~---d~~~~s~~K~~g-p~G~g~l~v~~~-~--~~~~~~~~p~~~~~~~~~~~~~~  304 (430)
                      +|+++++|++|+.|..+  .++..+   ++..+|.||+++ +. .|+++.+++ +  ++.+...................
T Consensus       152 ~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (388)
T 1b9h_A          152 TGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGE-GGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKI  230 (388)
T ss_dssp             HTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSS-CEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCS
T ss_pred             cCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCC-eEEEEECCHHHHHHHHHHHHHhCCCCccCccceeec
Confidence            89999999999988754  445444   355566779995 54 588888875 4  44331100000000000000011


Q ss_pred             CCC---ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC--CCccceEEEEcCCCc-hh
Q 043610          305 YNT---PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS--VRSFMNVPFTLEKSD-LE  378 (430)
Q Consensus       305 ~~T---~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~--~rs~~iv~f~~~~~~-~~  378 (430)
                      .|+   ++....+++..+++      .+++..++.+++++++.+.|.+..|+.+....+.  ......+.|.+++.. .+
T Consensus       231 ~g~~~~~~~~~~a~~~~~~~------~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (388)
T 1b9h_A          231 AGSNMRLNEFSASVLRAQLA------RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEER  304 (388)
T ss_dssp             CCCBCBCBHHHHHHHHHHHT------THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHH
T ss_pred             ccccCCcCHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCccc
Confidence            233   45444433333332      4567788888899999999997558877542111  123456778887521 13


Q ss_pred             H-HHHHHHHHcCCeecCCCCC-------------------------------CCeeEEeecCCC-CHHHHHHHHHHHHHH
Q 043610          379 A-EFVKEAAKEKMVQLKGHRS-------------------------------VGGMRASIYNAM-PLAGVEKLVAFMKDF  425 (430)
Q Consensus       379 ~-~~~~~L~~~Gi~~~~g~~~-------------------------------~g~iRis~~~~~-t~edv~~ll~~L~~~  425 (430)
                      . ++.+.|.++||.+..++..                               .+.||++++..+ |++||++++++|+++
T Consensus       305 ~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~  384 (388)
T 1b9h_A          305 RNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADA  384 (388)
T ss_dssp             HHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHH
Confidence            3 6999999999987544211                               125999999999 999999999999998


Q ss_pred             HHh
Q 043610          426 QAK  428 (430)
Q Consensus       426 ~~~  428 (430)
                      +++
T Consensus       385 ~~~  387 (388)
T 1b9h_A          385 VAR  387 (388)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            764

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.91  E-value=1.8e-23  Score=210.28  Aligned_cols=335  Identities=15%  Similarity=0.117  Sum_probs=210.5

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHH-HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFK-SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +.+++.+++.++++.|++++.+.+.+..+.+... .....+.... ...+.+++.+++++|.+.   +.++++||++|+.
T Consensus        33 ~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~---~~v~~~~Gs~a~~  108 (425)
T 3ecd_A           33 SQVELIASENIVSRAVLDAQGSVLTNKYAEGYPG-KRYYGGCEFADEVEALAIERVKRLFNAGH---ANVQPHSGAQANG  108 (425)
T ss_dssp             HSEECCTTCCCCCHHHHHHHTSGGGSSCTTC-------------CCHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHH
T ss_pred             cceeeecccCCCCHHHHHHHhhhhhcccccCCCc-chhcCCChHHHHHHHHHHHHHHHHhCCCC---ceeecCchHHHHH
Confidence            4677888888889999999998875322222110 0111112221 233445688999999874   3333478999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHH-HHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEeecCCCccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFK-EAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHICANETIHGV  223 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~-~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~~~~t~tG~  223 (430)
                      .++..++++||+|++..+.+.+..... .....| ....++...+ +.+..+|+++++  +. +++++|+++++++  |.
T Consensus       109 ~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--~~  185 (425)
T 3ecd_A          109 AVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVS-RDTMLIDYDQVEALAQQHKPSLIIAGFSAY--PR  185 (425)
T ss_dssp             HHHHHHCCTTCEEEEECC------------------CEEEEECCC-TTTSSCCHHHHHHHHHHHCCSEEEEECSCC--CS
T ss_pred             HHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCC-cccCccCHHHHHHHHhhcCCcEEEEccccC--CC
Confidence            999999999999998877665521111 111234 4444433221 112247888887  54 6899999987666  55


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccccEEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRFGVIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLML  293 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~d~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~~  293 (430)
                      ..+  +|.++ +++|+++++|++|+.|..     +-.+...|++++|+||++ ||.| |+++.+ +++.+.+...     
T Consensus       186 ~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-g~~~~~~~~~~~~~~~~-----  259 (425)
T 3ecd_A          186 KLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRG-GFVLTNDEEIAKKINSA-----  259 (425)
T ss_dssp             CCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHH-----
T ss_pred             cCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCCc-EEEEeCCHHHHHHHHhh-----
Confidence            666  67776 689999999999865532     222334689999999999 5876 999988 4555443210     


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                            ......++++...+.++..++..+.+ .+++.+.++..++++++++.|.+ .|+.+..  +...+ ..+.+.++
T Consensus       260 ------~~~~~~~~~~~~~~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~~~~-~~~~~~~~  328 (425)
T 3ecd_A          260 ------VFPGLQGGPLMHVIAGKAVAFGEALT-DDFKTYIDRVLANAQALGDVLKA-GGVDLVT--GGTDN-HLLLVDLR  328 (425)
T ss_dssp             ------HC-----CCCHHHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG--GSCSS-SEEEEECG
T ss_pred             ------hCccccCCccHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHh-CCCeecc--CCCCc-eEEEEEeC
Confidence                  00112246677777777777765432 35788999999999999999997 7887763  11123 34556665


Q ss_pred             CCchhH-HHHHHHHHcCCeec----CCCC----CCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610          374 KSDLEA-EFVKEAAKEKMVQL----KGHR----SVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       374 ~~~~~~-~~~~~L~~~Gi~~~----~g~~----~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~  428 (430)
                      +.+.+. .+.+.|.++||.+.    +|..    ..+++|+++...    .+++|+++++++|+++++.
T Consensus       329 ~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~  396 (425)
T 3ecd_A          329 PKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEA  396 (425)
T ss_dssp             GGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhc
Confidence            322233 57778888999987    4421    124799995554    4599999999999998764

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.91  E-value=6.6e-23  Score=205.18  Aligned_cols=315  Identities=14%  Similarity=0.060  Sum_probs=213.5

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCC
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPN  158 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~g  158 (430)
                      .+++++++++.+.+...+.        ...+    ...+++|+.+++++|.+   +++++ +|+|++++.++.++ +++|
T Consensus         9 ~~~~~v~~a~~~~~~~~~~--------~~~g----~~~~~l~~~la~~~~~~---~v~~~-~ggt~al~~~~~~l~~~~g   72 (394)
T 1o69_A            9 HMGGNELKYIEEVFKSNYI--------APLG----EFVNRFEQSVKDYSKSE---NALAL-NSATAALHLALRVAGVKQD   72 (394)
T ss_dssp             ---CCHHHHHHHHHHHTTT--------SCTT----HHHHHHHHHHHHHHCCS---EEEEE-SCHHHHHHHHHHHTTCCTT
T ss_pred             CCCHHHHHHHHHHHHcCCc--------cCCC----hHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHcCCCCC
Confidence            3556788888887753110        0011    34668999999999983   67775 78999999999998 8999


Q ss_pred             CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeecCCCccccCC--CCcc
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICANETIHGVEFK--EYPS  230 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~~t~tG~~~p--ei~~  230 (430)
                      |+|++..+.+.+..  ..++..| +++.++..+   .+ .+|+++++  +++   ++++|++++   ++|...+  +|.+
T Consensus        73 d~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~---~~-~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~  143 (394)
T 1o69_A           73 DIVLASSFTFIASV--APICYLKAKPVFIDCDE---TY-NIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVE  143 (394)
T ss_dssp             CEEEEESSSCGGGT--HHHHHTTCEEEEECBCT---TS-SBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHH
T ss_pred             CEEEECCCccHHHH--HHHHHcCCEEEEEEeCC---CC-CcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHH
Confidence            99998887776643  2344567 777777642   22 47888886  554   799999986   7898888  7888


Q ss_pred             c-cCCCcEEEEeccCcCCCCcccc-----ccccEEEeCCCccccCCccEEEEEc-HHHHhccCCCCCcccc---ccchhh
Q 043610          231 A-KNSTGILVADMSSNFCSKPVDV-----TRFGVIYAGAQKNVGPSGVTIVIVR-KDLLGNAQDKTPLMLD---YKIHDE  300 (430)
Q Consensus       231 ~-~~~g~~lvvD~a~s~G~~~idl-----~~~d~~~~s~~K~~gp~G~g~l~v~-~~~~~~~~~~~p~~~~---~~~~~~  300 (430)
                      + +++|+++++|++|++|....+.     ...|++.++.+|.+++.++|+++++ +++++.+.........   +-....
T Consensus       144 l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  223 (394)
T 1o69_A          144 ICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLD  223 (394)
T ss_dssp             HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSS
T ss_pred             HHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccc
Confidence            6 6899999999999987654322     2356888888999987789999995 7877654321111100   000112


Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc-ceEEEEcCCC----
Q 043610          301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF-MNVPFTLEKS----  375 (430)
Q Consensus       301 ~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~-~iv~f~~~~~----  375 (430)
                      .+..++|++....+++.. ++      .+++..++.+++++++++.|.+ . +++.+.....+.. .+++|.+++.    
T Consensus       224 ~g~~~~~~~~~aa~~l~~-l~------~l~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~  294 (394)
T 1o69_A          224 YGYNYRLSNVLGAIGVAQ-ME------VLEQRVLKKREIYEWYKEFLGE-Y-FSFLDELENSRSNRWLSTALINFDKNEL  294 (394)
T ss_dssp             CCCBCBCCHHHHHHHHHH-HT------THHHHHHHHHHHHHHHHHHHTT-T-EECCCCCTTEECCCSSEEEEESCCGGGS
T ss_pred             cCcccCcCHHHHHHHHHH-HH------HHHHHHHHHHHHHHHHHHHhcc-c-ccccCCCCCCcceeEEEEEEecchhhcc
Confidence            233445777766555442 43      3556788999999999999986 4 6655321111122 2466777632    


Q ss_pred             ----------------chhH-HHHHHHHHcCCeecCCCCC---------C-------------CeeEEeecCCCCHHHHH
Q 043610          376 ----------------DLEA-EFVKEAAKEKMVQLKGHRS---------V-------------GGMRASIYNAMPLAGVE  416 (430)
Q Consensus       376 ----------------~~~~-~~~~~L~~~Gi~~~~g~~~---------~-------------g~iRis~~~~~t~edv~  416 (430)
                                      +.+. ++.+.|.++||.+.+++..         .             ..+|+..+.++|++||+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~  374 (394)
T 1o69_A          295 NACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVY  374 (394)
T ss_dssp             CCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred             ccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHH
Confidence                            1234 6889999999987665210         0             34666778899999999


Q ss_pred             HHHHHHHHHHHh
Q 043610          417 KLVAFMKDFQAK  428 (430)
Q Consensus       417 ~ll~~L~~~~~~  428 (430)
                      +++++|++++.+
T Consensus       375 ~~~~~l~~~~~~  386 (394)
T 1o69_A          375 EISKLILKSIKA  386 (394)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhc
Confidence            999999998764

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.91  E-value=8.2e-23  Score=199.15  Aligned_cols=273  Identities=10%  Similarity=-0.047  Sum_probs=182.9

Q ss_pred             HHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCC
Q 043610          119 KAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYT  195 (430)
Q Consensus       119 ~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g  195 (430)
                      ++++.+++++|.+   +.+++ ++||++++.++.+++++||+|++....+.+..  +...++..| +++.++.       
T Consensus         2 ~l~~~la~~~g~~---~~i~~-~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------   70 (331)
T 1pff_A            2 ALEGKIAKLEHAE---ACAAT-ASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-------   70 (331)
T ss_dssp             HHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-------
T ss_pred             hHHHHHHHHhCCC---eEEEe-CChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-------
Confidence            5789999999986   34555 45699999999998899999998877766542  111134567 5555542       


Q ss_pred             CCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC-CCcEEEEeccCcCCCCccccc-cccEEEeCCCcccc
Q 043610          196 KIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN-STGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNVG  268 (430)
Q Consensus       196 ~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~-~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~g  268 (430)
                        .|+++++  +++++++|++++++|+||.+.|  +|.++ ++ +|+++++|++|+.|....+++ ..|+++.|+||++|
T Consensus        71 --~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~  148 (331)
T 1pff_A           71 --AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYIN  148 (331)
T ss_dssp             --TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTS
T ss_pred             --CCHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccC
Confidence              3566776  6789999999999999999999  78886 68 999999999999876543342 23799999999996


Q ss_pred             -CCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          269 -PSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       269 -p~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                       |.|  .|++++++ ++++.+.+....+           ..++++....+++..+++.+.      ...++..+..+.+.
T Consensus       149 ~~~~r~~G~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~  211 (331)
T 1pff_A          149 GHTDVVAGLVCSRADIIAKVKSQGIKDI-----------TGAIISPHDAWLITRGTLTLD------MRVKRAAENAQKVA  211 (331)
T ss_dssp             SSSSCCCEEEEECHHHHHHHHHTCCCCC-----------CCCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEEeCcHHHHHHHHHHHHhh-----------cCCCCCHHHHHHHHcCcchHH------HHHHHHHHHHHHHH
Confidence             655  79999998 8877654321100           113566666666666666432      12222233333333


Q ss_pred             HHHHcc--------------CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCC---C-----------
Q 043610          345 NVIDGS--------------NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG---H-----------  396 (430)
Q Consensus       345 ~~l~~~--------------~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g---~-----------  396 (430)
                      +.+++.              .|+++..... .....+++|.+++   ..++.+.|.+.||.+...   .           
T Consensus       212 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~  287 (331)
T 1pff_A          212 EFLHEHKAVKKVYYPGLPDHPGHEIAKKQM-KMFGSMIAFDVDG---LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASM  287 (331)
T ss_dssp             HHHHHCTTCCCEECTTSTTSTTHHHHHHHC-SSCCSEEEEECSS---HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHH
T ss_pred             HHHHcCCCeeEEECCCCCCCccHHHHHhhC-CCCceEEEEEECC---HHHHHHHHHhCCCceeccCCCCcceeeecchhh
Confidence            443321              1222221000 1123567788762   236777888899964221   1           


Q ss_pred             --------------CCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          397 --------------RSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       397 --------------~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                                    ...+.+|||++.+++++|+++++++|+++
T Consensus       288 ~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~  330 (331)
T 1pff_A          288 THAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV  330 (331)
T ss_dssp             TSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred             cccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence                          01368999999999999999999999864

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.91  E-value=2.6e-22  Score=200.04  Aligned_cols=327  Identities=10%  Similarity=0.053  Sum_probs=215.1

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      +++.|+. |. +|+.+++++.+.+.+.+         ...+    ....++++.+++++|.+   +++++ +|+|+|++.
T Consensus         9 ~~i~~~~-p~-~~~~~~~a~~~~~~~~~---------~~~~----~~~~~l~~~la~~~~~~---~~~~~-~~gt~al~~   69 (393)
T 1mdo_A            9 DFLPFSR-PA-MGAEELAAVKTVLDSGW---------ITTG----PKNQELEAAFCRLTGNQ---YAVAV-SSATAGMHI   69 (393)
T ss_dssp             CCBCSCC-CC-CCHHHHHHHHHHHHHTC---------CSSS----HHHHHHHHHHHHHHCCS---EEEEE-SCHHHHHHH
T ss_pred             cccccCC-CC-CCHHHHHHHHHHHhcCC---------cCCC----hHHHHHHHHHHHHhCCC---cEEEe-cChHHHHHH
Confidence            3555654 53 67889999988875411         0112    34568999999999985   57765 789999999


Q ss_pred             HHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccC
Q 043610          150 VPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEF  225 (430)
Q Consensus       150 ~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~  225 (430)
                      ++.++ +++||+|++..+++.+..  ..++..| +++.++..+   .+..+|+++++  +++++++|++++   ++|...
T Consensus        70 ~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~---~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~  141 (393)
T 1mdo_A           70 ALMALGIGEGDEVITPSMTWVSTL--NMIVLLGANPVMVDVDR---DTLMVTPEHIEAAITPQTKAIIPVH---YAGAPA  141 (393)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHH--HHHHHTTCEEEEECBCT---TTCCBCHHHHHHHCCTTEEEECCBC---GGGCCC
T ss_pred             HHHHcCCCCCCEEEeCCCccHhHH--HHHHHCCCEEEEEeccC---CcCCCCHHHHHHhcCCCceEEEEeC---CCCCcC
Confidence            99999 899999998877776643  3456678 777777643   22347888887  777899888864   799998


Q ss_pred             C--CCccc-cCCCcEEEEeccCcCCCCcc--ccccccEEEeCCC--ccccCCccEEEEEc-HHHHhccCCCCC--cccc-
Q 043610          226 K--EYPSA-KNSTGILVADMSSNFCSKPV--DVTRFGVIYAGAQ--KNVGPSGVTIVIVR-KDLLGNAQDKTP--LMLD-  294 (430)
Q Consensus       226 p--ei~~~-~~~g~~lvvD~a~s~G~~~i--dl~~~d~~~~s~~--K~~gp~G~g~l~v~-~~~~~~~~~~~p--~~~~-  294 (430)
                      |  +|.++ +++|+++++|++|+.|....  .+...|++++|+|  |++++...|+++.+ +++++.+.+...  ...+ 
T Consensus       142 ~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~  221 (393)
T 1mdo_A          142 DLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDA  221 (393)
T ss_dssp             CHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-
T ss_pred             CHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccc
Confidence            8  78886 68899999999999875421  1111579999999  99964336888886 777665432110  0000 


Q ss_pred             ccchhh---cC---CCCCC-ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC-CCC-cc
Q 043610          295 YKIHDE---NN---SLYNT-PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK-SVR-SF  365 (430)
Q Consensus       295 ~~~~~~---~~---~~~~T-~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~-~~r-s~  365 (430)
                      +.....   ..   ...|+ .....+ .+..++..+.   +++++.++.+++++++++.|.+ .++++..... ..+ ..
T Consensus       222 ~~~~~~~~~~~~~~~~~g~~~~~~~~-~~a~~~~~l~---~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~  296 (393)
T 1mdo_A          222 WDRQSGGRAPQAEVLAPGYKYNLPDL-NAAIALAQLQ---KLDALNARRAAIAAQYHQAMAD-LPFQPLSLPSWEHIHAW  296 (393)
T ss_dssp             ----------CCEESSCCCBCCCCHH-HHHHHHHHHH---THHHHHHHHHHHHHHHHHHHHT-SSCEECCCCSSCEECCC
T ss_pred             hhhhcccccccccccccCccCCCCHH-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCCCcee
Confidence            000000   00   01122 011111 1222222222   5778888888999999999987 5566542110 112 22


Q ss_pred             ceEEEEcCC---CchhHHHHHHHHHcCCeecCCCCC-----------------------CCeeEEeecCCCCHHHHHHHH
Q 043610          366 MNVPFTLEK---SDLEAEFVKEAAKEKMVQLKGHRS-----------------------VGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       366 ~iv~f~~~~---~~~~~~~~~~L~~~Gi~~~~g~~~-----------------------~g~iRis~~~~~t~edv~~ll  419 (430)
                      ..+.+.+++   .....++.+.|.++||.+.+|...                       .+.+|++++.+++++|+++++
T Consensus       297 ~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~  376 (393)
T 1mdo_A          297 HLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVI  376 (393)
T ss_dssp             SCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHH
T ss_pred             EEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHH
Confidence            356777762   112337999999999987765421                       126999999999999999999


Q ss_pred             HHHHHHHHh
Q 043610          420 AFMKDFQAK  428 (430)
Q Consensus       420 ~~L~~~~~~  428 (430)
                      ++|+++++.
T Consensus       377 ~~l~~~~~~  385 (393)
T 1mdo_A          377 TALHQIAGQ  385 (393)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHHhc
Confidence            999998764

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.90  E-value=1.9e-23  Score=211.30  Aligned_cols=327  Identities=12%  Similarity=-0.030  Sum_probs=222.0

Q ss_pred             CCceeecCCCC---CCcHHH--HHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-----CCCCCcE---
Q 043610           69 DRVFNFAAGPA---NLPEKV--LLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-----NIPQEYS---  135 (430)
Q Consensus        69 ~~~~l~~~gp~---~~~~~V--~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-----g~~~~~~---  135 (430)
                      +.+++|+.|-.   ..++.+  ++++.+.+.+.   +     ..++.+.  .-..++|+.+++++     +++++ +   
T Consensus        47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~---~-----~~~y~~~--~g~~~lr~~ia~~~~~~~~~~~~~-~~~~  115 (430)
T 2x5f_A           47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPD---E-----IFPYAPP--QGIEELRDLWQQKMLRDNPELSID-NMSR  115 (430)
T ss_dssp             TCSEECCCSSCEETTEECCCHHHHTTBSSCCGG---G-----TSSCCCT--TCCHHHHHHHHHHHHHHCTTCCGG-GBCC
T ss_pred             CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcc---c-----ccccCCC--CCCHHHHHHHHHHHhccCcccCCC-ccce
Confidence            45677777643   345555  66665544220   0     1122211  11236677777777     77765 6   


Q ss_pred             EEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHH-hC-CceEEecCCCCcCCCCCCccccc--cCC---C
Q 043610          136 VLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQK-FC-NPQVIWSGKAEKYTKIPNFDALE--QNP---D  208 (430)
Q Consensus       136 vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~-~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~  208 (430)
                      |+++ +|++++++.++.+++++||+|++..+++.+..  ..++. .| +++.++...+ ++  .+|+++++  +++   +
T Consensus       116 i~~t-~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~~g~~~~~~~~~~~-~~--~~d~~~l~~~l~~~~~~  189 (430)
T 2x5f_A          116 PIVT-NALTHGLSLVGDLFVNQDDTILLPEHNWGNYK--LVFNTRNGANLQTYPIFDK-DG--HYTTDSLVEALQSYNKD  189 (430)
T ss_dssp             CEEE-SHHHHHHHHHHHHHCCTTCEEEEESSCCTHHH--HHHTTTTCCEEEEECCBCT-TS--CBCSHHHHHHHHHCCSS
T ss_pred             EEEc-CCchHHHHHHHHHHhCCCCEEEEcCCcCccHH--HHHHHhcCCeEEEEeccCc-cC--CcCHHHHHHHHHhcCCC
Confidence            6664 89999999999999999999998877776643  44556 77 7777766431 12  36788886  544   7


Q ss_pred             ccEEEEeecCCCccccCC--C---Cccc-cC-----CCcEEEEeccCcCCC------Ccc--ccc---cc---cEEEeCC
Q 043610          209 AKYLHICANETIHGVEFK--E---YPSA-KN-----STGILVADMSSNFCS------KPV--DVT---RF---GVIYAGA  263 (430)
Q Consensus       209 ~~lv~i~~~~t~tG~~~p--e---i~~~-~~-----~g~~lvvD~a~s~G~------~~i--dl~---~~---d~~~~s~  263 (430)
                      +++|++++++||||.++|  +   |.++ ++     +|+++++|++|+...      .++  ++.   ..   ++++.|+
T Consensus       190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  269 (430)
T 2x5f_A          190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGA  269 (430)
T ss_dssp             EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEH
T ss_pred             CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEec
Confidence            899999999999999999  3   4443 47     999999999987432      122  332   23   4678999


Q ss_pred             CccccCCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH-HHHHhcCHHHHHHHHH
Q 043610          264 QKNVGPSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE-YLLELGGLNEVEKMNR  337 (430)
Q Consensus       264 ~K~~gp~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~-~l~~~~g~~~v~~~~~  337 (430)
                      +|++|++|  +|++++   ++++++.+......       ... ...+++|...++++..+|+ ...-...++.+.++++
T Consensus       270 sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~-------~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  341 (430)
T 2x5f_A          270 TKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKG-------LIR-SNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLK  341 (430)
T ss_dssp             HHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHH-------HHH-TTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhh-------hhh-cccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHH
Confidence            99999778  799999   88887764320000       000 1224678888888888887 3110112566899999


Q ss_pred             HHHHHHHHHHHc---cCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCCCCCeeEEeecCCCCHH
Q 043610          338 KKAELLYNVIDG---SNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHRSVGGMRASIYNAMPLA  413 (430)
Q Consensus       338 ~l~~~l~~~l~~---~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~~~g~iRis~~~~~t~e  413 (430)
                      ++++++.+.|.+   ..|+.+.+  +  .+...+.+.+++ ....++.+.|.+ +||.+.+|  ..+++|||++. ++++
T Consensus       342 ~~~~~l~~~L~~~~~~~g~~~~~--~--~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g--~~~~iRis~~~-~~~e  413 (430)
T 2x5f_A          342 ERYEVTKEVVYADQYHSHWQAYD--F--NSGYFMAIKVHD-VDPEALRKHLIDKYSIGVIAL--NATDIRIAFSC-VEKD  413 (430)
T ss_dssp             HHHHHHHHHHTCGGGTTTEEECC--C--CBSSEEEEEESS-SCHHHHHHHHHHHHCEECEEC--SSSEEEEEGGG-SCGG
T ss_pred             HHHHHHHHHHHhhCCCCCceeeC--C--CceEEEEeCCCC-CCHHHHHHHHHHhCCEEEecC--CCCeEEEEEec-CCHH
Confidence            999999999983   14776653  1  233345667762 123378999987 89999887  34689999984 5899


Q ss_pred             HHHHHHHHHHHHHHh
Q 043610          414 GVEKLVAFMKDFQAK  428 (430)
Q Consensus       414 dv~~ll~~L~~~~~~  428 (430)
                      |++++++.|++++++
T Consensus       414 ~i~~~~~~l~~~l~~  428 (430)
T 2x5f_A          414 DIPHVFDSIAKAIDD  428 (430)
T ss_dssp             GHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998865

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.90  E-value=3.9e-23  Score=208.79  Aligned_cols=286  Identities=15%  Similarity=0.057  Sum_probs=197.3

Q ss_pred             HHHHHHHHHhC--------CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecC
Q 043610          119 KAESDLRALLN--------IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSG  189 (430)
Q Consensus       119 ~~r~~la~l~g--------~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~  189 (430)
                      ++|+.++++++        .+++ +|+++ +|++++++.++..++++||+|++..+.|.+.. ...++..| +++.++..
T Consensus        87 ~lr~~la~~~~~~~g~~~~~~~~-~i~~~-~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~-~~~~~~~g~~~~~v~~~  163 (428)
T 1iay_A           87 EFRKAIAKFMEKTRGGRVRFDPE-RVVMA-GGATGANETIIFCLADPGDAFLVPSPYYPAFN-RDLRWRTGVQLIPIHCE  163 (428)
T ss_dssp             HHHHHHHHHHHHHTTTCSCCCTT-SCEEE-EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHH-HHTTTTTCCEEEEECCC
T ss_pred             HHHHHHHHHHHHhcCCCCCCChh-hEEEc-cChHHHHHHHHHHhCCCCCeEEEccCCCcchH-HHHHHhcCCEEEEeecC
Confidence            55566666655        5555 67765 78999999999999999999998877765532 11222457 66666654


Q ss_pred             CCCcCCCCCCccccc--cC------CCccEEEEeecCCCccccCC--CC---ccc-cCCCcEEEEeccCcC---CCC-cc
Q 043610          190 KAEKYTKIPNFDALE--QN------PDAKYLHICANETIHGVEFK--EY---PSA-KNSTGILVADMSSNF---CSK-PV  251 (430)
Q Consensus       190 ~~~~~g~~~d~~~l~--i~------~~~~lv~i~~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s~---G~~-~i  251 (430)
                      .+  .+..+|+++++  ++      +++++|++++++|+||.+.|  ++   .++ +++|+++++|++|+.   +.. ..
T Consensus       164 ~~--~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~  241 (428)
T 1iay_A          164 SS--NNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFV  241 (428)
T ss_dssp             TT--TTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCC
T ss_pred             Cc--cCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCcc
Confidence            21  22246788776  43      47999999999999999999  34   443 589999999999874   221 11


Q ss_pred             c---cc-c-------cc--EEEeCCCccccCCc--cEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHH
Q 043610          252 D---VT-R-------FG--VIYAGAQKNVGPSG--VTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYM  315 (430)
Q Consensus       252 d---l~-~-------~d--~~~~s~~K~~gp~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a  315 (430)
                      +   +. .       .|  +++.|+||++|++|  +|++++ ++++++.+..       .       ..+++.+...+.+
T Consensus       242 ~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~~a  307 (428)
T 1iay_A          242 SIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARK-------M-------SSFGLVSTQTQYF  307 (428)
T ss_dssp             CHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHH-------H-------HTTSCCCHHHHHH
T ss_pred             CHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHH-------H-------HhcccCCHHHHHH
Confidence            2   21 1       46  78899999999888  599999 6777665421       0       0113556777777


Q ss_pred             HHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----hhH-HHHHHHHHc
Q 043610          316 CGLVFEYLL-ELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----LEA-EFVKEAAKE  388 (430)
Q Consensus       316 ~~~al~~l~-~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----~~~-~~~~~L~~~  388 (430)
                      +..+|+... -...++.+.+++.++++++++.|.+ .|+.+.+  + . ....+.+.+++..     ... ++.+.|.++
T Consensus       308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~-~-~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  382 (428)
T 1iay_A          308 LAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV-VGIKCLK--N-N-AGLFCWMDLRPLLRESTFDSEMSLWRVIIND  382 (428)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCBCC--C-S-SSSEEEEECGGGCSSSSHHHHHHHHHHHHHT
T ss_pred             HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccC--C-C-eeEEEEEechhhcCCCchhHHHHHHHHHHHh
Confidence            777775421 0114678889999999999999997 4776543  1 1 2234556775311     122 688888776


Q ss_pred             -CCeecCCCCC----CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          389 -KMVQLKGHRS----VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       389 -Gi~~~~g~~~----~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       ||.+.+|...    .+++||+++ +++++++++++++|+++++++
T Consensus       383 ~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~  427 (428)
T 1iay_A          383 VKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGVE  427 (428)
T ss_dssp             SCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhcc
Confidence             9998765321    357999998 679999999999999998764

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.90  E-value=1.2e-22  Score=204.47  Aligned_cols=328  Identities=12%  Similarity=0.059  Sum_probs=212.3

Q ss_pred             CCceeecCC-------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           69 DRVFNFAAG-------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        69 ~~~~l~~~g-------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +++++|+.|       +.++++.|.+++.+...... .+.+   ..   ....+..+.+.+.+....+.+...+|++ ++
T Consensus        38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~---~~---~g~~~lr~~ia~~~~~~~~~~~~~~i~~-t~  109 (418)
T 3rq1_A           38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEH-VGYA---PI---AGIPDFLCAAEKECFGNFRPEGHIRSIA-TA  109 (418)
T ss_dssp             GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHH-HSCC---CT---TCCHHHHHHHHHHHHGGGCCSSEEEEEE-ES
T ss_pred             CCeEECCCCcccCCCCCccccHHHHHHHHHhccccc-CCCC---CC---CChHHHHHHHHHHHhcccCccccccEEE-CC
Confidence            457777777       67788899998866432100 0110   00   1122222333333333334322115665 58


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC----Ccc-EEE
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP----DAK-YLH  213 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~----~~~-lv~  213 (430)
                      |+++++..++.+++++||+|++..+.+.++.  ..++..| +++.++...+ ++  .+|+++++  +++    +++ +++
T Consensus       110 g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~-~~--~~d~~~l~~~l~~~~~~~~~~~vi  184 (418)
T 3rq1_A          110 GGTGGIHHLIHNYTEPGDEVLTADWYWGAYR--VICSDTGRTLVTYSLFDE-HN--NFNHEAFQNRVNELAAKQTNVVVI  184 (418)
T ss_dssp             HHHHHHHHHHHHHSCTTCEEEEESSCCTHHH--HHHHHTTCEEEEECSBCT-TS--SBCHHHHHHHHHHHHHHCSEEEEE
T ss_pred             chHHHHHHHHHHhcCCCCEEEECCCCchhHH--HHHHHcCCEEEEEeeeCC-CC--CcCHHHHHHHHHHhhccCCCEEEE
Confidence            9999999999999999999998887766543  3556677 8877876432 22  46888886  443    566 788


Q ss_pred             Eeec-CCCccccCC--CCccc----c------CCCcEEEEeccCc-CCCCc-----c--ccccc--c---EEEeCCCccc
Q 043610          214 ICAN-ETIHGVEFK--EYPSA----K------NSTGILVADMSSN-FCSKP-----V--DVTRF--G---VIYAGAQKNV  267 (430)
Q Consensus       214 i~~~-~t~tG~~~p--ei~~~----~------~~g~~lvvD~a~s-~G~~~-----i--dl~~~--d---~~~~s~~K~~  267 (430)
                      ++++ +||||.+.|  ++.++    +      ++|+++++|+++. ++...     +  ....+  +   +++.|++|.+
T Consensus       185 ~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  264 (418)
T 3rq1_A          185 FNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF  264 (418)
T ss_dssp             EECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTT
T ss_pred             EeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCC
Confidence            8888 999999999  44443    3      7999999999974 22211     0  11112  2   6778999999


Q ss_pred             cCCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--H--hcCHHHHHHHHHH
Q 043610          268 GPSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--E--LGGLNEVEKMNRK  338 (430)
Q Consensus       268 gp~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~--~~g~~~v~~~~~~  338 (430)
                      |++|  +|++++   ++++++.+....    .+   ... ..+.+++..++.++..+|+...  +  ...++.+++++++
T Consensus       265 ~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~---~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~  336 (418)
T 3rq1_A          265 TMYGQRVGAMIGISDDEEIADEFFEVN----KS---TSR-ATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRD  336 (418)
T ss_dssp             TCCSSCCEEEEEEESSHHHHHHHHHHH----HH---HHH-HHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcCCcceEEEEEeCCHHHHHHHHHHH----HH---HHh-hccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            9778  799998   888877643210    00   000 0113567777777777774321  0  0124567788899


Q ss_pred             HHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610          339 KAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       339 l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l  418 (430)
                      +++++.+.|.+ .|+++.+  +  .....+.+.+++   ..++.+.|.++||.+.+|.   +++|||++ ..++++++++
T Consensus       337 ~~~~l~~~L~~-~g~~~~~--~--~~~~~~~~~~~~---~~~~~~~l~~~gi~v~~g~---~~iRis~~-~~~~~~i~~~  404 (418)
T 3rq1_A          337 RADIFKQEAAQ-VGLPMLP--Y--RGGFFITIPTDS---ANAICEELKKEHIYVIALA---NGIRIAAC-GIPKCQMTGL  404 (418)
T ss_dssp             HHHHHHHHHHH-HTCCCCC--C--CSSSEEEEECTT---HHHHHHHHHHTTEECEECS---SEEEEEGG-GSCHHHHTTH
T ss_pred             HHHHHHHHHHh-cCCCCCC--C--CceEEEEcCCCC---HHHHHHHHHhCCEEEecCC---CCeEEEEe-cCCHHHHHHH
Confidence            99999999987 4776653  1  122233334431   3378888999999998863   47999977 5689999999


Q ss_pred             HHHHHHHHHhh
Q 043610          419 VAFMKDFQAKH  429 (430)
Q Consensus       419 l~~L~~~~~~~  429 (430)
                      ++.|++++++.
T Consensus       405 ~~~l~~~l~~~  415 (418)
T 3rq1_A          405 AEKIYNAMKSL  415 (418)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHH
Confidence            99999988754

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.90  E-value=3.5e-22  Score=201.96  Aligned_cols=289  Identities=13%  Similarity=0.095  Sum_probs=202.8

Q ss_pred             HHHHHHHHHHHHHhCCCC--------CcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceE
Q 043610          115 SIIEKAESDLRALLNIPQ--------EYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQV  185 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~--------~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~  185 (430)
                      +..+.+.+.+++.+|.+.        +.+|++ ++|++++++.++..++++||+|++..+++.+.  ...++..| +++.
T Consensus        82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~-t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~  158 (425)
T 2r2n_A           82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCV-TSGSQQGLCKVFEMIINPGDNVLLDEPAYSGT--LQSLHPLGCNIIN  158 (425)
T ss_dssp             HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEE-ESSHHHHHHHHHHHHCCTTCEEEEESSCCHHH--HHHHGGGTCEEEE
T ss_pred             HHHHHHHHHHHHhcCCCCccccccCCcCcEEE-eCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHH--HHHHHHcCCEEEE
Confidence            445567777777788764        126666 58899999999999999999999888777664  24455667 7777


Q ss_pred             EecCCCCcCCCCCCccccc--cC------------CCccEEEE-eecCCCccccCC-----CCccc-cCCCcEEEEeccC
Q 043610          186 IWSGKAEKYTKIPNFDALE--QN------------PDAKYLHI-CANETIHGVEFK-----EYPSA-KNSTGILVADMSS  244 (430)
Q Consensus       186 v~~~~~~~~g~~~d~~~l~--i~------------~~~~lv~i-~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~  244 (430)
                      ++..+   .+  +|+++|+  +.            +++++|++ ++++||||.+++     +|.++ +++|+++++|++|
T Consensus       159 v~~~~---~~--~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~  233 (425)
T 2r2n_A          159 VASDE---SG--IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPY  233 (425)
T ss_dssp             ECEET---TE--ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred             eCcCC---CC--CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence            76632   23  6777776  44            46888876 688999999999     34454 5899999999998


Q ss_pred             c---CC-CCccccccc-----cEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHH
Q 043610          245 N---FC-SKPVDVTRF-----GVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCI  313 (430)
Q Consensus       245 s---~G-~~~idl~~~-----d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~  313 (430)
                      +   ++ ..+.++..+     .+++.|++|++| +|  +|++++++++++.+..       .     .....+++|...+
T Consensus       234 ~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~-------~-----~~~~~~~~~~~~q  300 (425)
T 2r2n_A          234 YFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVIL-------H-----IQVSTLHPSTFNQ  300 (425)
T ss_dssp             GGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHH-------H-----HHTTTCSSCHHHH
T ss_pred             ccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHH-------H-----HHHhcCCCCHHHH
Confidence            7   32 222233222     378899999999 78  7999999988776421       0     0012246788888


Q ss_pred             HHHHHHHHHHHH---hcCHHHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEEEEcCCCchhHH-HHHHHHHc
Q 043610          314 YMCGLVFEYLLE---LGGLNEVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLEKSDLEAE-FVKEAAKE  388 (430)
Q Consensus       314 ~a~~~al~~l~~---~~g~~~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~-~~~~L~~~  388 (430)
                      .++..+|+.+.+   ...++.++++++++++++.+.|.+. .|+..+. .+  .....+.+.+++.....+ +.+.|.++
T Consensus       301 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~p--~~g~~~~~~~~~~~~~~~~~~~~l~~~  377 (425)
T 2r2n_A          301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWH-VP--AAGMFLWIKVKGINDVKELIEEKAVKM  377 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEC-CC--SBSSEEEEEETTCSCCHHHHHTHHHHT
T ss_pred             HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEe-CC--CceEEEEEEeCCCCCHHHHHHHHHHHC
Confidence            888888875321   1135777888899999999999863 3653221 12  122345567764222335 56788899


Q ss_pred             CCeecCCCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          389 KMVQLKGHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       389 Gi~~~~g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ||.+.+|..       ..+++|||++. .++++++++++.|++++++
T Consensus       378 gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~  423 (425)
T 2r2n_A          378 GVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKE  423 (425)
T ss_dssp             TEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHH
T ss_pred             CcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHH
Confidence            999877532       13579999983 5999999999999998865

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.90  E-value=4.8e-22  Score=200.30  Aligned_cols=332  Identities=10%  Similarity=0.020  Sum_probs=211.2

Q ss_pred             CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CC
Q 043610           78 PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CT  156 (430)
Q Consensus        78 p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~  156 (430)
                      ..++++.+++++.+.+.+.+ .+  .+...   ....+..+++++.+++++|.+   +++++ +|||++++.++.++ ++
T Consensus        11 ~~~~~~~~~~a~~~~~~~~~-~~--~~~~~---~g~~~l~~~l~~~la~~~g~~---~~i~~-~~gt~al~~~~~~~~~~   80 (418)
T 2c81_A           11 WPQHSDRTRRKIEEVFQSNR-WA--ISGYW---TGEESMERKFAKAFADFNGVP---YCVPT-TSGSTALMLALEALGIG   80 (418)
T ss_dssp             SSCCCHHHHHHHHHHHHHTC-CS--TTSBC---CSSCCHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHTTCC
T ss_pred             CCCCCHHHHHHHHHHHhcCC-cc--ccCcc---cCCHHHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHcCCC
Confidence            34678999999999886521 11  01000   111244678899999999987   45665 67899999999998 88


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA  231 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~  231 (430)
                      +||+|++...++.+..  ..++..| +++.++..+   .+..+|+++++  +++++++|+++|   +||...+  +|.++
T Consensus        81 ~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~~  152 (418)
T 2c81_A           81 EGDEVIVPSLTWIATA--TAVLNVNALPVFVDVEA---DTYCIDPQLIKSAITDKTKAIIPVH---LFGSMANMDEINEI  152 (418)
T ss_dssp             TTCEEEEESSSCTHHH--HHHHHTTCEEEEECBCT---TTCSBCHHHHGGGCCTTEEEECCBC---CTTCCCCHHHHHHH
T ss_pred             CcCEEEECCCccHhHH--HHHHHcCCEEEEEecCC---CCCCcCHHHHHHhhCCCCeEEEEeC---CcCCcccHHHHHHH
Confidence            9999998887777653  3455677 777777642   12247888887  678899888764   7899888  78886


Q ss_pred             -cCCCcEEEEeccCcCCCC-c-cccccc-cEEE--eCCCccccCCccEEEEEc-HHHHhccCCCCCccccccch---hhc
Q 043610          232 -KNSTGILVADMSSNFCSK-P-VDVTRF-GVIY--AGAQKNVGPSGVTIVIVR-KDLLGNAQDKTPLMLDYKIH---DEN  301 (430)
Q Consensus       232 -~~~g~~lvvD~a~s~G~~-~-idl~~~-d~~~--~s~~K~~gp~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~---~~~  301 (430)
                       +++|+++++|++|+.|.. . ..+..+ |+.+  +++||++|+...|+++.+ +++++.+.+...........   ...
T Consensus       153 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  232 (418)
T 2c81_A          153 AQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMH  232 (418)
T ss_dssp             HHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCT
T ss_pred             HHHCCCEEEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCcccccccccccc
Confidence             689999999999998873 1 112222 3444  455999987236888884 67665532210000000000   000


Q ss_pred             CCC--CCCccHHH----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC--CCccceEEEEcC
Q 043610          302 NSL--YNTPPCYC----IYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS--VRSFMNVPFTLE  373 (430)
Q Consensus       302 ~~~--~~T~~~~~----~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~--~rs~~iv~f~~~  373 (430)
                      ...  .+++...+    +..+.+++.... ..+++++.++.+++++++++.|.+..|+++......  .....++++.++
T Consensus       233 ~~~~~~~~~~~~g~~~~~~~~~aa~~~~~-l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~  311 (418)
T 2c81_A          233 GDMQLVKKGDIQGSNYCLSEFQSAILLDQ-LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFD  311 (418)
T ss_dssp             TCBSEEECCSSCCCBCCCCHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEEC
T ss_pred             chhhccccccccCcCCCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEc
Confidence            000  00111100    001112222111 235788889999999999999987558877521111  223335667776


Q ss_pred             C---Cchh-HHHHHHHHHc-CCe---ecCCCCC--------------------------------------CCeeEEeec
Q 043610          374 K---SDLE-AEFVKEAAKE-KMV---QLKGHRS--------------------------------------VGGMRASIY  407 (430)
Q Consensus       374 ~---~~~~-~~~~~~L~~~-Gi~---~~~g~~~--------------------------------------~g~iRis~~  407 (430)
                      +   .+.+ .++.+.|.++ ||.   +..++..                                      .+.||++++
T Consensus       312 ~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~  391 (418)
T 2c81_A          312 PVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHA  391 (418)
T ss_dssp             GGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGG
T ss_pred             cccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCC
Confidence            3   0123 3799999888 999   6554310                                      147999999


Q ss_pred             CCC-CHHHHHHHHHHHHHHHHh
Q 043610          408 NAM-PLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       408 ~~~-t~edv~~ll~~L~~~~~~  428 (430)
                      .++ |++||++++++|++++++
T Consensus       392 ~~~gt~edi~~~~~~l~~~~~~  413 (418)
T 2c81_A          392 ILLAEPSHLSLLVDAVAELARK  413 (418)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCHHHHHHHHHHHHHHHHh
Confidence            999 999999999999998764

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.90  E-value=1.8e-22  Score=208.61  Aligned_cols=330  Identities=11%  Similarity=0.055  Sum_probs=219.4

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT~  145 (430)
                      .+..+++..|+...|..+++++.+.+.+..+.+...|...   ....++.+.+.+.+.+..|  ++++ +|+++ +|+++
T Consensus        94 ~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~---~G~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G~~~  168 (500)
T 3tcm_A           94 HPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHS---QGIHGLRDAIASGIASRDGFPANAD-DIFLT-DGASP  168 (500)
T ss_dssp             SGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCT---TCCHHHHHHHHHHHHHHHSSCCCGG-GEEEE-SSSHH
T ss_pred             CcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCC---cChHHHHHHHHHHHHhhcCCCCCcc-cEEEc-CCHHH
Confidence            3456667666666888899988777765322122222111   2223344455555555556  3444 67664 78999


Q ss_pred             HHHHHHhhcC-CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEe
Q 043610          146 QFAAVPLNLC-TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHIC  215 (430)
Q Consensus       146 a~~~~~~sl~-~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~  215 (430)
                      ++..++..++ ++||+|++..+.+.++  ...++..| +++.++..++..|  .+|+++|+  +++      ++++|+++
T Consensus       169 al~~~~~~l~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~~~~~k~ivl~  244 (500)
T 3tcm_A          169 GVHLMMQLLIRNEKDGILVPIPQYPLY--SASIALHGGALVPYYLNESTGW--GLETSDVKKQLEDARSRGINVRALVVI  244 (500)
T ss_dssp             HHHHHHHHHCCSTTEEEEEEESCCTHH--HHHHHHTTCEEEEEECBTTTTS--BCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHHHHHHHHcCCCCCEEEEeCCCcHhH--HHHHHHcCCEEEEEecccccCC--CCCHHHHHHHHHHHHhcCCCceEEEEE
Confidence            9999999998 7999999888877654  34455667 7777877543223  47888887  544      78999999


Q ss_pred             ecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-----ccc-------c---cc-cc-EEEeCCCccc-cCCc
Q 043610          216 ANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-----PVD-------V---TR-FG-VIYAGAQKNV-GPSG  271 (430)
Q Consensus       216 ~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-----~id-------l---~~-~d-~~~~s~~K~~-gp~G  271 (430)
                      +++||||.+++  +   |.++ +++|+++++|+++..+..     ..+       +   .+ .. +++.|++|.+ |++|
T Consensus       245 ~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G  324 (500)
T 3tcm_A          245 NPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECG  324 (500)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGG
T ss_pred             CCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCc
Confidence            99999999999  3   4443 588999999999874321     122       1   11 12 5678999999 8888


Q ss_pred             --cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH-----------HHHHhcCHHHHHHH
Q 043610          272 --VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE-----------YLLELGGLNEVEKM  335 (430)
Q Consensus       272 --~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~-----------~l~~~~g~~~v~~~  335 (430)
                        +|++++   ++++++.+..       .   .   ....+++..+++++..+++           +..   .++.+.++
T Consensus       325 ~R~G~~~~~~~~~~~~~~l~~-------~---~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~  388 (500)
T 3tcm_A          325 KRGGYFEITGFSAPVREQIYK-------I---A---SVNLCSNITGQILASLVMNPPKASDESYASYKA---EKDGILAS  388 (500)
T ss_dssp             GCCEEEEEESCCTTHHHHHHH-------H---H---HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHH---HHHHHHHH
T ss_pred             cceEEEEEeCCCHHHHHHHHH-------H---H---hcccCCCHHHHHHHHHHhcCccccchhHHHHHH---HHHHHHHH
Confidence              799888   7777765421       0   0   1224678888888887775           322   35788899


Q ss_pred             HHHHHHHHHHHHHccCCceecCCCCCCCccceEEE--EcCCC----------chhHHHH-HHHHHcCCeecCCCCC----
Q 043610          336 NRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF--TLEKS----------DLEAEFV-KEAAKEKMVQLKGHRS----  398 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f--~~~~~----------~~~~~~~-~~L~~~Gi~~~~g~~~----  398 (430)
                      ++++++++++.|.+..|+.+.+  +  .+.+.+.+  .++..          ..+..++ +.|.++||.+.+|...    
T Consensus       389 l~~~~~~l~~~L~~~~g~~~~~--~--~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~  464 (500)
T 3tcm_A          389 LARRAKALEHAFNKLEGITCNE--A--EGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVP  464 (500)
T ss_dssp             HHHHHHHHHHHHHTSTTEECCC--C--CBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCT
T ss_pred             HHHHHHHHHHHHhcCCCcEEec--C--CeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCC
Confidence            9999999999999755887753  1  12232222  22210          0012233 4567789998876432    


Q ss_pred             -CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          399 -VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       399 -~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       .+.+|+++.  +++++++++++.|++++++
T Consensus       465 g~~~iRis~~--~~~e~i~~~i~~l~~~~~~  493 (500)
T 3tcm_A          465 GTWHFRCTIL--PQEDKIPAVISRFTVFHEA  493 (500)
T ss_dssp             TCCBEEEESC--SCTTTHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence             236999998  6888999999888887654

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.90  E-value=3.8e-23  Score=207.58  Aligned_cols=333  Identities=15%  Similarity=0.120  Sum_probs=211.9

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHH-HHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEF-KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~-~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      .+.+.++....++.|++++.+.+.+..+.|... ...+.+... ....+.+++.+++++|.+++ + +++ ++|++++..
T Consensus        32 ~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~-v~~-~sGs~a~~~  107 (420)
T 3gbx_A           32 HIELIASENYTSPRVMQAQGSQLTNKYAEGYPG-KRYYGGCEYVDVVEQLAIDRAKELFGADYA-N-VQP-HSGSQANFA  107 (420)
T ss_dssp             SEECCTTCCCCCHHHHHHHTSGGGGCCC---------------CHHHHHHHHHHHHHHHTCSEE-E-CCC-SSHHHHHHH
T ss_pred             ceeeeccCCCCCHHHHHHHHHHHhcccccCCCC-ccccCchHHHHHHHHHHHHHHHHHhCCCCc-e-eEe-cCcHHHHHH
Confidence            345556666689999999998875422112110 011111111 23455677899999999753 3 434 456899999


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHHHH-HHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-CccEEEEeecCCCcccc
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDKAF-KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLHICANETIHGVE  224 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~~~-~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~i~~~~t~tG~~  224 (430)
                      ++.+++++||+|++....+.+.... ......| .+..++...+ +.+ .+|+++++  +++ ++++|+++++++  |..
T Consensus       108 a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~-~~d~~~l~~~i~~~~~~~v~~~~~~~--~~~  183 (420)
T 3gbx_A          108 VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID-ESG-KIDYDEMAKLAKEHKPKMIIGGFSAY--SGV  183 (420)
T ss_dssp             HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC-TTC-SCCHHHHHHHHHHHCCSEEEECCTTC--CSC
T ss_pred             HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC-ccC-CcCHHHHHHHHHhcCCeEEEEecCcc--CCc
Confidence            9999999999999877665442110 1111223 3343333211 122 47888887  554 689999987666  456


Q ss_pred             CC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccccEEEeCCCccc-cCCccEEEEEcH---HHHhccCCCCCcc
Q 043610          225 FK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRFGVIYAGAQKNV-GPSGVTIVIVRK---DLLGNAQDKTPLM  292 (430)
Q Consensus       225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~---~~~~~~~~~~p~~  292 (430)
                      .|  +|.++ +++|+++++|++|+.|..     +..+...|++++|+||++ ||.| |+++.++   ++.+.+...   .
T Consensus       184 ~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~~---~  259 (420)
T 3gbx_A          184 VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNSA---V  259 (420)
T ss_dssp             CCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHHH---H
T ss_pred             cCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhhh---c
Confidence            77  67776 689999999999875543     444555689999999999 6888 9999987   555543210   0


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                              .....++++...+.++..++..+. ..+++++.++..++++++++.|.+ .|+++..  +...+ ..+.+.+
T Consensus       260 --------~~~~~~~~~~~~~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~~~~~-~~~~~~~  326 (420)
T 3gbx_A          260 --------FPSAQGGPLMHVIAGKAVALKEAM-EPEFKVYQQQVAKNAKAMVEVFLN-RGYKVVS--GGTEN-HLFLLDL  326 (420)
T ss_dssp             --------C----CCCCHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGG--GSCSS-SEEEEEC
T ss_pred             --------CCCCCCCcchhHHHHHHHHHHHHH-hHhHHHHHHHHHHHHHHHHHHHHh-cCCeecc--CCCCC-eEEEEEc
Confidence                    011235677777777777776543 235788899999999999999997 7888763  11123 3455565


Q ss_pred             CCCchhH-HHHHHHHHcCCeecC-------CCC-CCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610          373 EKSDLEA-EFVKEAAKEKMVQLK-------GHR-SVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       373 ~~~~~~~-~~~~~L~~~Gi~~~~-------g~~-~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~  428 (430)
                      ++.+.+. .+.+.|.++||.+.+       +.. ...++||++...    .+++|+++++++|++++++
T Consensus       327 ~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~  395 (420)
T 3gbx_A          327 VDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN  395 (420)
T ss_dssp             GGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence            4322334 577788888999765       221 123599998754    4589999999999988754

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.90  E-value=5.7e-22  Score=200.50  Aligned_cols=330  Identities=12%  Similarity=0.118  Sum_probs=213.7

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccC-CCCcccccCCCcHHHHHHHHHHHHHHHHHh----CCCCCcEEEEEe
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRG-SGMSVMEMSHRGKEFKSIIEKAESDLRALL----NIPQEYSVLFLQ  140 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g~~~~~~vv~~~  140 (430)
                      .+++++|+.|-  .+.|+.|++++.+.+.++.. .+...|...   ..    ..++++.+++++    +.+++ +|+++ 
T Consensus        55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~---~g----~~~l~~~ia~~~~~~~~~~~~-~i~~t-  125 (432)
T 3ei9_A           55 DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAE---QG----AKPLRAAIAKTFYGGLGIGDD-DVFVS-  125 (432)
T ss_dssp             TCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCT---TC----CHHHHHHHHHHHHTTTTCCGG-GEEEE-
T ss_pred             CCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCC---CC----CHHHHHHHHHHHHccCCCCcc-eEEEC-
Confidence            34677777765  46789999999998875422 222211111   11    235556666664    77665 77775 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCCCcCCCCCCccccccCC
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKAEKYTKIPNFDALEQNP  207 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~~~~g~~~d~~~l~i~~  207 (430)
                      +|+++++.. +..++++||+|++..+.+.+..  ..++..|             ++..++....  .+..++   ++..+
T Consensus       126 ~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---l~~~~  197 (432)
T 3ei9_A          126 DGAKCDISR-LQVMFGSNVTIAVQDPSYPAYV--DSSVIMGQTGQFNTDVQKYGNIEYMRCTPE--NGFFPD---LSTVG  197 (432)
T ss_dssp             SCHHHHHHH-HHHHHCTTCCEEEEESCCTHHH--HHHHHHTCSCCEETTTTEETTCEEEECCGG--GTTSCC---GGGCC
T ss_pred             CChHHHHHH-HHHHcCCCCEEEEeCCCCHHHH--HHHHHcCCcccccccccccCceEEeccCcc--cCCcCC---hhhCC
Confidence            789999987 4777799999999888877642  2333334             3455555321  121222   33246


Q ss_pred             CccEEEEeecCCCccccCC--CC---ccc-cCCCcEEEEeccCc---CCCCccccc------cccEEEeCCCccccCCc-
Q 043610          208 DAKYLHICANETIHGVEFK--EY---PSA-KNSTGILVADMSSN---FCSKPVDVT------RFGVIYAGAQKNVGPSG-  271 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~~~p--ei---~~~-~~~g~~lvvD~a~s---~G~~~idl~------~~d~~~~s~~K~~gp~G-  271 (430)
                      ++++|++++++||||.+++  ++   .++ +++|+++++|++|+   ++..+..+.      +.++++.|++|++|++| 
T Consensus       198 ~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~  277 (432)
T 3ei9_A          198 RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGV  277 (432)
T ss_dssp             CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTT
T ss_pred             CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCccc
Confidence            8999999999999999998  44   443 58899999999988   333232222      22488999999999888 


Q ss_pred             -cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          272 -VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       272 -~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                       +|+++++++.+...  ..+..-.+....  ....++++.+++.++..+++.... ..++++.++++++++++++.|.+ 
T Consensus       278 r~G~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~L~~-  351 (432)
T 3ei9_A          278 RLGWTVIPKKLLYSD--GFPVAKDFNRII--CTCFNGASNISQAGALACLTPEGL-EAMHKVIGFYKENTNIIIDTFTS-  351 (432)
T ss_dssp             CCEEEECCTTCBCTT--SCBHHHHHHHHH--HHSCCCSCHHHHHHHHHHSSHHHH-HHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             ceEEEEEChHHhhcc--hHHHHHHHHHHh--ccccCCCCHHHHHHHHHHHhcccH-HHHHHHHHHHHHHHHHHHHHHHH-
Confidence             89999987762110  000000010000  012346777888887777752211 24688899999999999999997 


Q ss_pred             CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHH-cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          351 NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAK-EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       351 ~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~-~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .|+.+.+  + ..+ ..+.+.+++ ....++.+.|.+ +||.+.+|..    ..+++|||+.  +++++++++++.|++-
T Consensus       352 ~g~~~~~--~-~~~-~~~~~~~~~-~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~--~~~e~l~~~l~rl~~~  424 (432)
T 3ei9_A          352 LGYDVYG--G-KNA-PYVWVHFPN-QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF--GHRENILEACRRFKQL  424 (432)
T ss_dssp             TTCCEEE--C-SSS-SEEEEECTT-SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHH
T ss_pred             CCceecC--C-Ccc-eEEEEECCC-CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence            5877653  1 123 346677763 223367777654 5999877642    2468999974  4999999999999986


Q ss_pred             HH
Q 043610          426 QA  427 (430)
Q Consensus       426 ~~  427 (430)
                      -+
T Consensus       425 ~~  426 (432)
T 3ei9_A          425 YK  426 (432)
T ss_dssp             HT
T ss_pred             hh
Confidence            44

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.90  E-value=1.5e-22  Score=205.01  Aligned_cols=284  Identities=14%  Similarity=0.086  Sum_probs=195.2

Q ss_pred             HHHHHHHHHhC--------CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHH-HhC-CceEEec
Q 043610          119 KAESDLRALLN--------IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQ-KFC-NPQVIWS  188 (430)
Q Consensus       119 ~~r~~la~l~g--------~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~-~~g-~~~~v~~  188 (430)
                      ++|+.++++++        ++++ +++++ +|++++++.++..+.++||+|++..+.+.+..  ..++ ..| +++.++.
T Consensus        90 ~l~~~la~~~~~~~~~~~~~~~~-~v~~~-~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~~~~~~~  165 (435)
T 3piu_A           90 AFKKAMVDFMAEIRGNKVTFDPN-HLVLT-AGATSANETFIFCLADPGEAVLIPTPYYPGFD--RDLKWRTGVEIVPIHC  165 (435)
T ss_dssp             HHHHHHHHHHHHHTTTSSCCCGG-GEEEE-EHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHTTTTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHhhCCCCCCCHH-HEEEc-CChHHHHHHHHHHhcCCCCeEEECCCccccHH--HHHHHhcCCEEEEeeC
Confidence            56666777666        5554 67775 78999999999999999999998888766542  2333 457 7777776


Q ss_pred             CCCCcCCCCCCccccc--cC------CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---CC-c
Q 043610          189 GKAEKYTKIPNFDALE--QN------PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---SK-P  250 (430)
Q Consensus       189 ~~~~~~g~~~d~~~l~--i~------~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~-~  250 (430)
                      ..+  .+..+|+++|+  +.      +++++|++++++|+||.+++  +   |.++ +++|+++++|++|+.+   .. .
T Consensus       166 ~~~--~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~  243 (435)
T 3piu_A          166 TSS--NGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSF  243 (435)
T ss_dssp             CGG--GTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCC
T ss_pred             CCc--cCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCC
Confidence            532  12246788776  43      38999999999999999999  3   4443 5889999999998742   21 1


Q ss_pred             cccc----c---------cc--EEEeCCCccccCCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHH
Q 043610          251 VDVT----R---------FG--VIYAGAQKNVGPSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYC  312 (430)
Q Consensus       251 idl~----~---------~d--~~~~s~~K~~gp~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~  312 (430)
                      ..+.    +         .|  +++.|++|++|++|  +|+++++ +.+.+.+...              ..+++.+...
T Consensus       244 ~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~--------------~~~~~~~~~~  309 (435)
T 3piu_A          244 ISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM--------------SSFGLVSSQT  309 (435)
T ss_dssp             CCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHH--------------GGGSCCCHHH
T ss_pred             cCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHH--------------hhcCCCCHHH
Confidence            1111    1         22  78899999999778  7999984 5554433210              0113445566


Q ss_pred             HHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc------hhHHHHHHH
Q 043610          313 IYMCGLVFEYLLE-LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD------LEAEFVKEA  385 (430)
Q Consensus       313 ~~a~~~al~~l~~-~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~------~~~~~~~~L  385 (430)
                      +.++..+++.... ...+++.+++++++++++++.|.+ .|+++.+  +  .+...+.+.+++..      ...++.++|
T Consensus       310 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~--~--~~g~~~~~~l~~~~~~~~~~~~~~~~~~l  384 (435)
T 3piu_A          310 QHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLN--G--NAGLFCWVDMRHLLRSNTFEAEMELWKKI  384 (435)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCEECC--C--CSSSEEEEECGGGSSSSSHHHHHHHHHHH
T ss_pred             HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccC--C--CeeEEEEEEcccccccCCchhHHHHHHHH
Confidence            6666666653210 114577888999999999999997 5887653  1  12234556665311      122688888


Q ss_pred             HHc-CCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          386 AKE-KMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       386 ~~~-Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++ ||.+.+|..    ..+++||++... ++++++++++.|++++++
T Consensus       385 ~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~  431 (435)
T 3piu_A          385 VYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGE  431 (435)
T ss_dssp             HHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHH
Confidence            666 999876532    246899999755 999999999999998875

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.90  E-value=6.9e-23  Score=205.77  Aligned_cols=330  Identities=11%  Similarity=0.068  Sum_probs=196.5

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh----C--CCCCcEEEEEeCc
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL----N--IPQEYSVLFLQGG  142 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~----g--~~~~~~vv~~~~g  142 (430)
                      +.+++|+.|-....+.+.+++.+.+.+....+........++..  .-..++|+.+++++    |  ++++ +|+++ +|
T Consensus        31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t-~G  106 (417)
T 3g7q_A           31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGP--QGKTALLNALAVLLRETLGWDIEPQ-NIALT-NG  106 (417)
T ss_dssp             -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCT--TSHHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SC
T ss_pred             CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCC--CCcHHHHHHHHHHHHHHhCCCCCcc-cEEEe-CC
Confidence            56888888765444444444444332211011000000111110  11234555555555    4  5555 77775 78


Q ss_pred             HHHHHHHHHhhcCCCCC-----cEEEE-eCChhHHHHHHHHH---Hh-C-CceEEecCCCCcCCCCCCccccccCCCccE
Q 043610          143 ATTQFAAVPLNLCTPND-----PVDYI-VTGSWGDKAFKEAQ---KF-C-NPQVIWSGKAEKYTKIPNFDALEQNPDAKY  211 (430)
Q Consensus       143 aT~a~~~~~~sl~~~gd-----~vl~~-~~g~~~~~~~~~a~---~~-g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~l  211 (430)
                      +|++++.++..++++||     +|++. .+.+.++..  .+.   .. + .+.+.....+ .++..+|++++++++++++
T Consensus       107 ~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~l~~~~~~~~  183 (417)
T 3g7q_A          107 SQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYAD--SGLEDDLFVSARPNIELLPEG-QFKYHVDFEHLHIGEETGM  183 (417)
T ss_dssp             HHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-------CCEEECCCEEEEEGGG-EEEEECCGGGCCCCTTEEE
T ss_pred             cHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchh--hccchhhhccccCcccccCCc-ccccccCHHHhccccCceE
Confidence            99999999999988877     77765 445444321  111   11 2 3333333211 1122467777777788999


Q ss_pred             EEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-----cc--ccccccEEEeCCCccccCCc--cEEEE
Q 043610          212 LHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-----PV--DVTRFGVIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-----~i--dl~~~d~~~~s~~K~~gp~G--~g~l~  276 (430)
                      |++++++||||.++|  +   |.++ +++|+++++|++|+....     ..  +..+.++++.|++|+ +++|  +|+++
T Consensus       184 v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~  262 (417)
T 3g7q_A          184 ICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSKL-GLPGSRCGIII  262 (417)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGGG-TCTTSCCEEEE
T ss_pred             EEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechhc-cCCCcceEEEE
Confidence            999999999999999  3   4443 589999999999874221     11  122335889999994 6556  89999


Q ss_pred             EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHcc-
Q 043610          277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN-----EVEKMNRKKAELLYNVIDGS-  350 (430)
Q Consensus       277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~-----~v~~~~~~l~~~l~~~l~~~-  350 (430)
                      .++++++.+..       ..   .  ....+++...+.++..+++.    ..+.     .+.++++++++.+++.|.+. 
T Consensus       263 ~~~~~~~~~~~-------~~---~--~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  326 (417)
T 3g7q_A          263 ANDKTITAIAN-------MN---G--IISLAPGGMGPAMMCEMIKR----NDLLRLSETVIKPFYYQRVQQTIAIIRRYL  326 (417)
T ss_dssp             CCHHHHHHHHH-------HH---H--HHCCCCCSHHHHHHHHHHHT----TCHHHHHHHTHHHHHHHHHHHHHHHHHHHC
T ss_pred             eCHHHHHHHHH-------hh---c--ceeeCCCcHHHHHHHHHHcC----cchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99888776422       00   0  01123455556666555542    1222     25667777888888888763 


Q ss_pred             C--CceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC-----------CCeeEEeecCCCCHHHHH
Q 043610          351 N--GFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS-----------VGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       351 ~--G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~-----------~g~iRis~~~~~t~edv~  416 (430)
                      .  |+.+..  +  .....+.+.++..+.+. ++.+.|.++||.+.+|...           .+++|||++.  ++++++
T Consensus       327 ~~~~~~~~~--~--~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~  400 (417)
T 3g7q_A          327 SEERCLIHK--P--EGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIE  400 (417)
T ss_dssp             CTTTCEEEC--C--CBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHH
T ss_pred             ccCCceeeC--C--CcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHH
Confidence            2  455432  1  12234556776422333 7999999999998765321           3579999985  999999


Q ss_pred             HHHHHHHHHHHh
Q 043610          417 KLVAFMKDFQAK  428 (430)
Q Consensus       417 ~ll~~L~~~~~~  428 (430)
                      ++++.|++++++
T Consensus       401 ~~~~~l~~~l~~  412 (417)
T 3g7q_A          401 AGVKILAEEIER  412 (417)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.90  E-value=6.2e-22  Score=196.07  Aligned_cols=319  Identities=11%  Similarity=0.044  Sum_probs=208.2

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      ++++.+..++++.+++++.+.+...         ....+    ...+++++.+++++|.+   +++++ +|||+|++.++
T Consensus         5 ~~~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~----~~~~~l~~~la~~~~~~---~~~~~-~sGt~al~~al   67 (367)
T 3nyt_A            5 IDLKNQQARIKDKIDAGIQRVLRHG---------QYILG----PEVTELEDRLADFVGAK---YCISC-ANGTDALQIVQ   67 (367)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHC---------CCSSC----HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHH
T ss_pred             ccccccccccCHHHHHHHHHHHhcC---------CccCC----hHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHH
Confidence            3455555567888999988876531         01112    23568899999999986   56765 78999999999


Q ss_pred             hhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC-
Q 043610          152 LNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK-  226 (430)
Q Consensus       152 ~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p-  226 (430)
                      .++ +++||+|++....+.+..  ..++..| +++.++..++  . ..+|+++++  +++++++|+   +++++|...| 
T Consensus        68 ~~~~~~~gd~Vi~~~~~~~~~~--~~~~~~G~~~~~~~~~~~--~-~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~  139 (367)
T 3nyt_A           68 MALGVGPGDEVITPGFTYVATA--ETVALLGAKPVYVDIDPR--T-YNLDPQLLEAAITPRTKAII---PVSLYGQCADF  139 (367)
T ss_dssp             HHTTCCTTCEEEEESSSCTHHH--HHHHHTTCEEEEECBCTT--T-CSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCH
T ss_pred             HHhCCCCcCEEEECCCccHHHH--HHHHHcCCEEEEEecCCc--c-CCcCHHHHHHhcCcCCcEEE---eeCCccChhhH
Confidence            998 799999998887776643  3455678 8877877532  1 247888887  788888877   5678999888 


Q ss_pred             -CCccc-cCCCcEEEEeccCcCCCCc--cccccc-cEEEeC--CCccccCCc-cEEEEEc-HHHHhccCCCCCc--cccc
Q 043610          227 -EYPSA-KNSTGILVADMSSNFCSKP--VDVTRF-GVIYAG--AQKNVGPSG-VTIVIVR-KDLLGNAQDKTPL--MLDY  295 (430)
Q Consensus       227 -ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~~-d~~~~s--~~K~~gp~G-~g~l~v~-~~~~~~~~~~~p~--~~~~  295 (430)
                       +|.++ +++|+++++|++|++|...  ..+..+ |++++|  .+|++|+.| .|+++.+ +++.+.+......  ...|
T Consensus       140 ~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~  219 (367)
T 3nyt_A          140 DAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRY  219 (367)
T ss_dssp             HHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETT
T ss_pred             HHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCc
Confidence             78886 6899999999999988651  112222 778877  589998755 5666664 5665543221110  0000


Q ss_pred             cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC-CCccceEEEEcCC
Q 043610          296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS-VRSFMNVPFTLEK  374 (430)
Q Consensus       296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~-~rs~~iv~f~~~~  374 (430)
                      .. ...+.. ...+.....++...++      .+++..++.+++++++++.|.+ .|+.+....+. ......+.+.+++
T Consensus       220 ~~-~~~g~~-~~~~~~~aa~~~~~l~------~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~  290 (367)
T 3nyt_A          220 HH-IRVGVN-SRLDTLQAAILLPKLE------IFEEEIALRQKVAAEYDLSLKQ-VGIGTPFIEVNNISVYAQYTVRMDN  290 (367)
T ss_dssp             EE-CSCCCB-CCCCHHHHHHHHHHHH------THHHHHHHHHHHHHHHHHHHHH-TTCCCCCCCTTEECCCSSEEEECSS
T ss_pred             ee-eccCcC-CCccHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhcc-CCeeccCCCCCCceeeEEEEEEeCC
Confidence            00 000111 1233322222222232      4577888889999999999997 46554322111 1233345555542


Q ss_pred             CchhHHHHHHHHHcCCeecCCCC----------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          375 SDLEAEFVKEAAKEKMVQLKGHR----------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       375 ~~~~~~~~~~L~~~Gi~~~~g~~----------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                         ..++.+.|.++||.+..++.                      ....+|++++..+|++||+++++.|++.-.
T Consensus       291 ---~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~~~  362 (367)
T 3nyt_A          291 ---RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNLEH  362 (367)
T ss_dssp             ---HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC---
T ss_pred             ---HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence               23689999999998654321                      013699999999999999999999987543

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1.9e-22  Score=205.49  Aligned_cols=336  Identities=13%  Similarity=0.078  Sum_probs=219.9

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHH-HHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAE-SDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r-~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +.+++.+++.++++.|++++.+.+.+....|... .....+....+.++++. +.+++++|++.   +.++++||++++.
T Consensus        46 ~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~-~~~~~g~~~~~~~e~~a~~~la~~~g~~~---~~v~~~sGs~a~~  121 (447)
T 3h7f_A           46 DTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPG-RRYYGGCEHVDVVENLARDRAKALFGAEF---ANVQPHSGAQANA  121 (447)
T ss_dssp             HSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHHHH
T ss_pred             CceeEecCCCCCCHHHHHHHHHHhcCCccccCCc-ccccCccHHHHHHHHHHHHHHHHHcCCCc---eEEEeCCHHHHHH
Confidence            4577788888889999999998875422222211 12222344444555555 99999999874   3342467899999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHH-HHHHhC-CceE--EecCCCCcCCCCCCccccc--c-CCCccEEEEeecCCCc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFK-EAQKFC-NPQV--IWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANETIH  221 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~-~a~~~g-~~~~--v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t~t  221 (430)
                      .++.+++++||+|++....+.++.... .....| ....  ++...  +. ..+|+++++  + ..++++|+++.+++++
T Consensus       122 ~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~-~~~d~~~l~~~i~~~~~~~i~~~~~~~~~  198 (447)
T 3h7f_A          122 AVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP--AT-HLIDMDAVRATALEFRPKVIIAGWSAYPR  198 (447)
T ss_dssp             HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT--TT-CSCCHHHHHHHHHHHCCSEEEEECSSCCS
T ss_pred             HHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc--cc-CCcCHHHHHHHHHhcCCeEEEEcCCCCCC
Confidence            999999999999998776553311000 001112 2333  33322  12 257888887  4 3578899998888877


Q ss_pred             cccCCCCccc-cCCCcEEEEeccCcCCC-----CccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCcccc
Q 043610          222 GVEFKEYPSA-KNSTGILVADMSSNFCS-----KPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       222 G~~~pei~~~-~~~g~~lvvD~a~s~G~-----~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~  294 (430)
                      +.-+.+|.++ +++|+++++|++|..|.     .+-.+...|+++.|+||++ ||.| |+++.++++++.+.+.      
T Consensus       199 ~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~~g-G~i~~~~~~~~~l~~~------  271 (447)
T 3h7f_A          199 VLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRS-GLIVGKQQYAKAINSA------  271 (447)
T ss_dssp             CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCCSC-EEEEECGGGHHHHHHH------
T ss_pred             ccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCCCe-EEEEECHHHHHHHhhh------
Confidence            7622278886 68999999999986542     2212344589999999999 5988 9999998776653210      


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEE
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPF  370 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f  370 (430)
                           ......++++...+.++..++..+.+ .++++..++..++++++.+.|.+.    .|+.++. .+ ..+ ..+.+
T Consensus       272 -----~~~~~~~~~~~~~~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~-~~-~~~-~~~~~  342 (447)
T 3h7f_A          272 -----VFPGQQGGPLMHVIAGKAVALKIAAT-PEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVS-GG-TDV-HLVLV  342 (447)
T ss_dssp             -----HTTTTCSSCCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGG-GS-CSS-SEEEE
T ss_pred             -----cCCcccCCccHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEec-CC-CCC-CEEEE
Confidence                 01113357777777888888875542 256888999999999999999863    2887763 11 122 23445


Q ss_pred             EcCCCchhH-HHHHHHHHcCCeec----CCC----CCCCeeEEeecCC----CCHHHHHHHHHHHHHHHHh
Q 043610          371 TLEKSDLEA-EFVKEAAKEKMVQL----KGH----RSVGGMRASIYNA----MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       371 ~~~~~~~~~-~~~~~L~~~Gi~~~----~g~----~~~g~iRis~~~~----~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+.+.+. .+.+.|.++||.+.    ++.    ...+++||++...    .+++|+++++++|++++..
T Consensus       343 ~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~  413 (447)
T 3h7f_A          343 DLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT  413 (447)
T ss_dssp             ECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred             EcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence            665433344 45566777799876    331    1235799997653    5799999999999998753

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.89  E-value=3.1e-23  Score=211.30  Aligned_cols=279  Identities=10%  Similarity=0.040  Sum_probs=198.1

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKY  194 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~  194 (430)
                      .++++++.+++ +|++ + +++ +++|+|+++.+++.+++++||+|++..+.|.+..  ..+...| +++.++...+.++
T Consensus        58 ~~~~~~~~la~-~g~~-~-~v~-~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~--~~~~~~G~~~~~v~~~~~~~~  131 (446)
T 2x3l_A           58 VILKSMKQVEK-HSDY-D-GYF-LVNGTTSGILSVIQSFSQKKGDILMARNVHKSVL--HALDISQQEGHFIETHQSPLT  131 (446)
T ss_dssp             HHHHHHHHHCS-CTTE-E-EEE-ESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHH--HHHHHHTCCEEECEEEECTTT
T ss_pred             HHHHHHHHHHh-cCCC-c-eEE-EeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHH--HHHHHcCCeEEEEeCeecccc
Confidence            45689999999 9987 2 555 4689999999999999999999998887777643  2334467 7777766211122


Q ss_pred             C--CCCCccccccCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccccc--cEEEeC
Q 043610          195 T--KIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVTRF--GVIYAG  262 (430)
Q Consensus       195 g--~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~~~--d~~~~s  262 (430)
                      +  ..+|++++ +++++++|++++ .|++|.+.|  +|.++ +++|+++++|++|+. ..     +++...+  |+++.|
T Consensus       132 ~~~~~~d~~~l-~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~g~Di~~~S  208 (446)
T 2x3l_A          132 NHYNKVNLSRL-NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNYQADYVVQS  208 (446)
T ss_dssp             SSEEEEEC--------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGGTCSEEEEC
T ss_pred             CcCCCCCHHHH-cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHcCCCEEEEC
Confidence            2  13566666 678899999999 667999999  78886 689999999999875 22     4444433  799999


Q ss_pred             CCccc-cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          263 AQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       263 ~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      +||++ |+.|+|++++++++++ ..+    +...   .. ....++++...++++..+++++.+ .|.+++.++..++++
T Consensus       209 ~~K~l~~~~g~g~l~~~~~~i~-~~~----~~~~---~~-~~~~~s~~~~~~aal~~a~~~l~~-~g~~~~~~~~~~l~~  278 (446)
T 2x3l_A          209 FHKTLPALTMGSVLYIHKNAPY-REN----IIEY---LS-YFQTSSPSYLIMASLESAAQFYKT-YDSTLFFAKRAQLIE  278 (446)
T ss_dssp             HHHHSSSCTTCEEEEEETTCTT-HHH----HHHH---HH-HHSCSSCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHH
T ss_pred             CccccccccccEEEEEcCCcCC-HHH----HHHH---HH-HHcCCCchHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHH
Confidence            99988 6889999999887654 111    0000   00 012367888888888888888774 466768888888888


Q ss_pred             HHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeec-CCCCCCCeeEEeecCCCCHHHHHHHH
Q 043610          342 LLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL-KGHRSVGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~-~g~~~~g~iRis~~~~~t~edv~~ll  419 (430)
                      ++++.     |++++...    .+..+.+.+++  .+. ++.+.|.++||.+. .|.   +.+|++++.+++++|+ +++
T Consensus       279 ~l~~~-----g~~~~~~~----~~~~l~i~~~~--~~~~~l~~~L~~~GI~v~~~g~---~~iRi~~~~~~t~e~i-~l~  343 (446)
T 2x3l_A          279 CLENK-----GFEMLQVD----DPLKLLIKYEG--FTGHDIQNWFMNAHIYLELADD---YQALAILPLWHHDDTY-LFD  343 (446)
T ss_dssp             HHHHH-----TCEEEECS----STTEEEEECTT--SCHHHHHHHHHHTTEEESEECS---SCEEEECCCCCTTCCC-CHH
T ss_pred             HHHHc-----CCEECcCC----CCeEEEEEeCC--cCHHHHHHHHHHCCCEEEecCC---CEEEEEeecCCCHHHH-HHH
Confidence            88876     66665311    12346677763  333 78889988899986 443   4799999999999999 999


Q ss_pred             HHHHHHHHh
Q 043610          420 AFMKDFQAK  428 (430)
Q Consensus       420 ~~L~~~~~~  428 (430)
                      ++|++++++
T Consensus       344 ~aL~~~~~~  352 (446)
T 2x3l_A          344 SLLRKIEDM  352 (446)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHHh
Confidence            999998754

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.89  E-value=7.7e-23  Score=200.37  Aligned_cols=306  Identities=14%  Similarity=0.107  Sum_probs=194.1

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCC
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPND  159 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd  159 (430)
                      .+++.+++++.+...     +...+   ...+    ...++|+.+++++|.+   +++++ +|||+++.+++.++++|||
T Consensus        15 ~p~~~~~~a~~~~~~-----~~~~y---~~~~----~~~~l~~~la~~~g~~---~~~~~-~~gt~a~~~~~~~~~~~gd   78 (347)
T 1jg8_A           15 KPTEEMRKAMAQAEV-----GDDVY---GEDP----TINELERLAAETFGKE---AALFV-PSGTMGNQVSIMAHTQRGD   78 (347)
T ss_dssp             CCCHHHHHHHHTCCC-----CCGGG---TCCH----HHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHHCCTTC
T ss_pred             CCCHHHHHHHhcCCC-----CCccc---CCCh----HHHHHHHHHHHHhCCc---eEEEe-cCcHHHHHHHHHHhcCCCC
Confidence            456788888865421     11001   1122    3457889999999985   45665 6788999998888889999


Q ss_pred             cEEEEeCChhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------CccEEEEeecCCCc-cccCC--
Q 043610          160 PVDYIVTGSWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAKYLHICANETIH-GVEFK--  226 (430)
Q Consensus       160 ~vl~~~~g~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~lv~i~~~~t~t-G~~~p--  226 (430)
                      +|++..+.+++.. ....++..| +++.+ ..+   .+ .+|+++++  +++      ++++|++++++|+| |.++|  
T Consensus        79 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~---~~-~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~  153 (347)
T 1jg8_A           79 EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGK---NG-AMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLE  153 (347)
T ss_dssp             EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEE---TT-EECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHH
T ss_pred             EEEEcCcchhhhccccchhhccCeEEEEe-cCC---CC-ccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHH
Confidence            9998777655421 112344556 66655 321   22 46888886  554      69999999999999 99998  


Q ss_pred             C---Cccc-cCCCcEEEEeccCcCCC---Cccccc----cccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCcccc
Q 043610          227 E---YPSA-KNSTGILVADMSSNFCS---KPVDVT----RFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLD  294 (430)
Q Consensus       227 e---i~~~-~~~g~~lvvD~a~s~G~---~~idl~----~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~  294 (430)
                      +   |.++ +++|+++++|++|.++.   ...+..    ..|.++.++||++| |.| ++++.++++++.+....+ .+ 
T Consensus       154 ~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~~~~~~~~~~-~~-  230 (347)
T 1jg8_A          154 NIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVG-SVVVGDRDFIERARKARK-ML-  230 (347)
T ss_dssp             HHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHH-HH-
T ss_pred             HHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCce-EEEEcCHHHHHHHHHHHH-Hc-
Confidence            3   4444 57899999999886532   122222    34777789999997 544 366678877765321000 00 


Q ss_pred             ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610          295 YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       295 ~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                             +.. ...+....++...+++...     +.+. +..++++++++.|++. |+.+.. .+ ..+ ..+.+.+++
T Consensus       231 -------~~~-~~~~~~~~~~~~~~l~~~~-----~~~~-~~~~~~~~l~~~L~~~-~~~~~~-~~-~~~-~~~~~~~~~  292 (347)
T 1jg8_A          231 -------GGG-MRQAGVLAAAGIIALTKMV-----DRLK-EDHENARFLALKLKEI-GYSVNP-ED-VKT-NMVILRTDN  292 (347)
T ss_dssp             -------TCC-CSSTHHHHHHHHHHHHHSS-----TTHH-HHHHHHHHHHHHHHHH-TCBCCG-GG-CCS-SEEEEECTT
T ss_pred             -------CCc-hhHHHHHHHHHHHHHHHHH-----HHHH-HHHHHHHHHHHHHHhc-Cceecc-CC-Ccc-eEEEEEccc
Confidence                   000 0112222233334454321     2222 2334667888888874 766421 11 233 346677763


Q ss_pred             CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          375 SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       375 ~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .+.+. ++.++|.++||.+.++.  .+.+|++++.+++++|+++++++|++++++.
T Consensus       293 ~~~~~~~~~~~l~~~gi~v~~~~--~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~  346 (347)
T 1jg8_A          293 LKVNAHGFIEALRNSGVLANAVS--DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  346 (347)
T ss_dssp             SSSCHHHHHHHHHHHTEECEEEE--TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHCCCEEecCC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence            12233 79999988999876532  3579999998999999999999999988753

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.89  E-value=6.4e-21  Score=190.21  Aligned_cols=317  Identities=10%  Similarity=0.018  Sum_probs=210.0

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      +++..++..+++.+++++.+.+.+.          .+..   ....+++++.+++++|.+   +++++ +|||++++.++
T Consensus         4 ~~~~~~~~~~~~~~~~a~~~~~~~~----------~~~~---~~~~~~l~~~la~~~~~~---~~i~~-~sGt~a~~~al   66 (390)
T 3b8x_A            4 INYPLASSTWDDLEYKAIQSVLDSK----------MFTM---GEYVKQYETQFAKTFGSK---YAVMV-SSGSTANLLMI   66 (390)
T ss_dssp             -CBCSCCCCCCHHHHHHHHHHHHHT----------CCSS---CHHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHH
T ss_pred             eeccCCCCCCCHHHHHHHHHHHHcC----------CCCC---ChHHHHHHHHHHHHHCCC---cEEEE-CCHHHHHHHHH
Confidence            4555688889999999999887541          1111   134668999999999986   45665 67889999999


Q ss_pred             hhc-------CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCc
Q 043610          152 LNL-------CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIH  221 (430)
Q Consensus       152 ~sl-------~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~t  221 (430)
                      .++       +++||+|++....+.+..  ..++..| +++.++..++  . ..+|+++++  +++++++|++++   ++
T Consensus        67 ~~~~~~~~~~~~~g~~Vi~~~~~~~~~~--~~~~~~g~~~~~~~~~~~--~-~~~d~~~l~~~i~~~~~~v~~~~---~~  138 (390)
T 3b8x_A           67 AALFFTKKPRLKKGDEIIVPAVSWSTTY--YPLQQYGLRVKFVDIDIN--T-LNIDIESLKEAVTDSTKAILTVN---LL  138 (390)
T ss_dssp             HHTTSSSSCSCCTTCEEEEESSSCHHHH--HHHHHTTCEEEEECBCTT--T-CSBCHHHHHHHCCTTEEEEEEEC---GG
T ss_pred             HHHHhhhhcCCCCcCEEEECCCCcHHHH--HHHHHcCCEEEEEecCcc--c-cCcCHHHHHHHhCcCCeEEEEEC---Cc
Confidence            988       788999998877776643  2345667 7777776531  1 247888887  788899999984   56


Q ss_pred             cccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc----cEEE---eCCCccccCCccEEEEEcH-HHHhccCCCCC
Q 043610          222 GVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF----GVIY---AGAQKNVGPSGVTIVIVRK-DLLGNAQDKTP  290 (430)
Q Consensus       222 G~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~----d~~~---~s~~K~~gp~G~g~l~v~~-~~~~~~~~~~p  290 (430)
                      |...|  +|.++ +++|+++++|++|++|..+ +...+    |+..   .+++|..++.| |+++.++ ++.+.+.+...
T Consensus       139 g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~  216 (390)
T 3b8x_A          139 GNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNKCAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRA  216 (390)
T ss_dssp             GCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTEETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTB
T ss_pred             cChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCcccccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHh
Confidence            88888  78886 7899999999999998765 44333    3333   33445335667 9999886 55443221010


Q ss_pred             cc--cc---------------ccc---hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          291 LM--LD---------------YKI---HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       291 ~~--~~---------------~~~---~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                      .-  .+               +..   ....+..+++++....+++.. ++.      ++++.++.+++++++++.|.+.
T Consensus       217 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-l~~------l~~~~~~~~~~~~~l~~~L~~~  289 (390)
T 3b8x_A          217 HGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ-LKK------LPRFISVRRKNAEYFLDKFKDH  289 (390)
T ss_dssp             TTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHHhcCC
Confidence            00  00               000   001122234667666655543 442      4678889999999999999875


Q ss_pred             CCceecCCCCCCCccceEEEEcCCC-chhH-HHHHHHHHcCCeecC---CCC--C----------------------CCe
Q 043610          351 NGFYKCPVEKSVRSFMNVPFTLEKS-DLEA-EFVKEAAKEKMVQLK---GHR--S----------------------VGG  401 (430)
Q Consensus       351 ~G~~~~~~~~~~rs~~iv~f~~~~~-~~~~-~~~~~L~~~Gi~~~~---g~~--~----------------------~g~  401 (430)
                      .|+++.. .+.......+.+.+++. +.+. ++.+.|.++||.+..   |..  .                      .+.
T Consensus       290 ~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (390)
T 3b8x_A          290 PYLDVQQ-ETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG  368 (390)
T ss_dssp             SSEEECC-CCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred             CCcccCC-CCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence            5887653 22122223355555521 1233 789999999998654   210  0                      025


Q ss_pred             eEEeecCCCCHHHHHHHHHHHH
Q 043610          402 MRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       402 iRis~~~~~t~edv~~ll~~L~  423 (430)
                      ||++++.++|++||++++++|+
T Consensus       369 l~l~~~~~~t~~di~~i~~~l~  390 (390)
T 3b8x_A          369 LFVGNHQIELFDEIDYLREVLK  390 (390)
T ss_dssp             EEEECCSSCCHHHHHHHHHHTC
T ss_pred             EEeeCCCCCCHHHHHHHHHhhC
Confidence            9999999999999999998873

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.89  E-value=4.3e-23  Score=209.39  Aligned_cols=336  Identities=9%  Similarity=0.032  Sum_probs=201.3

Q ss_pred             CCce-eecCCCCCCcHHHHHHHHHHhhhccCC-------CC-cccccCCCcHHHHHHHHHHHHHHHHHh------CCCCC
Q 043610           69 DRVF-NFAAGPANLPEKVLLKAQSELYNWRGS-------GM-SVMEMSHRGKEFKSIIEKAESDLRALL------NIPQE  133 (430)
Q Consensus        69 ~~~~-l~~~gp~~~~~~V~~a~~~~~~~~~~~-------g~-s~~~~~~~~~~~~~~~~~~r~~la~l~------g~~~~  133 (430)
                      +.++ +|+.|-...++.+.+++.+.+.+...+       +. +....+ +...  .-..++|+.+++++      +++++
T Consensus        31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~--~g~~~lr~~ia~~l~~~~g~~~~~~  107 (444)
T 3if2_A           31 DQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMAN-YSNP--QGDSAFIDALVGFFNRHYDWNLTSE  107 (444)
T ss_dssp             SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHS-CCCT--TCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred             chhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhc-cCCC--CCCHHHHHHHHHHHHhhcCCCCCHH
Confidence            5677 777776566777777777766553322       21 110011 1111  11235555555555      44555


Q ss_pred             cEEEEEeCcHHHHHHHHHhhcCCCCC--------------cEEEE-eCChhHHHHHH----HHHHhC-CceEEecCCCCc
Q 043610          134 YSVLFLQGGATTQFAAVPLNLCTPND--------------PVDYI-VTGSWGDKAFK----EAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       134 ~~vv~~~~gaT~a~~~~~~sl~~~gd--------------~vl~~-~~g~~~~~~~~----~a~~~g-~~~~v~~~~~~~  193 (430)
                       +|+++ +|+|++++.++..++++||              +|+++ .+.+.++...-    .....| .+..++...+..
T Consensus       108 -~i~~t-~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  185 (444)
T 3if2_A          108 -NIALT-NGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEG  185 (444)
T ss_dssp             -GEEEE-SSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEE
T ss_pred             -HEEEe-cCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccC
Confidence             77775 7899999999999988887              67654 34444432100    011224 444444421000


Q ss_pred             -CCCCCCccccc-----cCCCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-----cc--ccc
Q 043610          194 -YTKIPNFDALE-----QNPDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-----PV--DVT  254 (430)
Q Consensus       194 -~g~~~d~~~l~-----i~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-----~i--dl~  254 (430)
                       ++..+|+++|+     +++++++|++++++|+||.++|  +   |.++ +++|+++|+|++|+.+..     +.  +..
T Consensus       186 ~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~  265 (444)
T 3if2_A          186 FFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWD  265 (444)
T ss_dssp             EEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCC
T ss_pred             ccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCC
Confidence             01236887776     3788999999999999999999  3   4443 589999999999874321     11  122


Q ss_pred             cccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH-H
Q 043610          255 RFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN-E  331 (430)
Q Consensus       255 ~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~-~  331 (430)
                      +.++++.|++|+ +++|  +|+++.++++++.+....       .  .   ...+++...+.++..+++......... .
T Consensus       266 ~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~-------~--~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  332 (444)
T 3if2_A          266 NNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMN-------A--V---VNLAPTRFGAAIATPLVANDRIKQLSDNE  332 (444)
T ss_dssp             TTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHH-------H--H---HHSSCCCHHHHHHHHHHHTSHHHHHHHHT
T ss_pred             CCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHH-------H--h---ccCCCChHHHHHHHHHHHcCchhHHHHHH
Confidence            345889999997 5445  888988988877642200       0  0   002334455555555554211000112 2


Q ss_pred             HHHHHHHHHHHHHHHHHcc-C--CceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCC---------
Q 043610          332 VEKMNRKKAELLYNVIDGS-N--GFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRS---------  398 (430)
Q Consensus       332 v~~~~~~l~~~l~~~l~~~-~--G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~---------  398 (430)
                      +.++++++++.+.+.|.+. .  ++.+..  + . ....+.+.++..+.+. ++.+.|.++||.+.+|...         
T Consensus       333 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~-~-~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~  408 (444)
T 3if2_A          333 IKPFYQKQATLAVKLLKQALGDYPLMIHK--P-E-GAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDY  408 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSSSEEEEC--C-C-BSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCceEec--C-C-ccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCccc
Confidence            5566677777777777652 2  444432  1 1 2234556666422333 7999999999998765321         


Q ss_pred             ---CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          399 ---VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       399 ---~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                         .++||||++.  ++++|+++++.|++++++
T Consensus       409 ~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~  439 (444)
T 3if2_A          409 QHAHECIRMSIAA--DEQTLIDGIKVIGEVVRE  439 (444)
T ss_dssp             SGGGSEEEEESSS--CHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHH
Confidence               2579999997  999999999999998764

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.89  E-value=1.6e-21  Score=192.98  Aligned_cols=311  Identities=12%  Similarity=0.084  Sum_probs=204.8

Q ss_pred             CCceeecCC----CCC-CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           69 DRVFNFAAG----PAN-LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        69 ~~~~l~~~g----p~~-~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      +..++|+.|    +.. .++.+++++.+.+.++. ....     .+..   ....++++.+++++|.+ + +++++ +|+
T Consensus        28 ~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~-~~~~-----~y~~---~~~~~l~~~la~~~g~~-~-~v~~~-~g~   95 (375)
T 2eh6_A           28 KEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLL-HVSN-----LYEN---PWQEELAHKLVKHFWTE-G-KVFFA-NSG   95 (375)
T ss_dssp             CEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCS-CCCT-----TBCC---HHHHHHHHHHHHTSSSC-E-EEEEE-SSH
T ss_pred             CEEEEcCCcccccccCCCCHHHHHHHHHHHHhcc-ccCc-----ccCC---HHHHHHHHHHHhhcCCC-C-eEEEe-Cch
Confidence            345556544    223 68899999999886531 1111     1111   23457889999999984 3 77765 789


Q ss_pred             HHHHHHHHhh---cC---CCC-CcEEEEeCChhHHHHHHHHHHhC-Cce----EEecCCCCcCC--CCCCccccc--cCC
Q 043610          144 TTQFAAVPLN---LC---TPN-DPVDYIVTGSWGDKAFKEAQKFC-NPQ----VIWSGKAEKYT--KIPNFDALE--QNP  207 (430)
Q Consensus       144 T~a~~~~~~s---l~---~~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~----~v~~~~~~~~g--~~~d~~~l~--i~~  207 (430)
                      +++++.++..   +.   +|| |+|++..+++.+...  .+...+ ...    ..+...  +..  ..+|+++++  +++
T Consensus        96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~  171 (375)
T 2eh6_A           96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTY--GSLSATGQPKFHKGFEPLVP--GFSYAKLNDIDSVYKLLDE  171 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSH--HHHHHCBCGGGTTTTCSCCS--SEEEECTTCHHHHHTTCCT
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCch--hhhhhcCCccccCCCCCCCC--CceeCCCchHHHHHHHhcC
Confidence            9999988764   34   678 899988776555322  122222 211    001100  000  014677776  678


Q ss_pred             CccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc--ccccc----ccEEEeCCCcccc-CCcc
Q 043610          208 DAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP--VDVTR----FGVIYAGAQKNVG-PSGV  272 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~--idl~~----~d~~~~s~~K~~g-p~G~  272 (430)
                      ++++|++++++|+||.+.|      +|.++ +++|+++++|++|+ +|..+  ++++.    .|++++|  |++| +.++
T Consensus       172 ~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~  249 (375)
T 2eh6_A          172 ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPI  249 (375)
T ss_dssp             TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCC
T ss_pred             CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCe
Confidence            8999999999999999965      34444 58999999999998 76543  33433    3566544  9996 5669


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG  352 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G  352 (430)
                      |++++++++++.+.+..           .+...++ +...+.++..+|+.+.      ...++.+++++++++.|++ .+
T Consensus       250 G~~~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~l~~~~------~~~~~~~~~~~~l~~~L~~-~~  310 (375)
T 2eh6_A          250 GAILAREEVAQSFTPGS-----------HGSTFGG-NPLACRAGTVVVDEVE------KLLPHVREVGNYFKEKLKE-LG  310 (375)
T ss_dssp             EEEEEEHHHHTTCCTTS-----------CCCSSTT-CHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH-TT
T ss_pred             EEEEEcHHHHhhhcCCC-----------CCCCCCC-CHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH-Hh
Confidence            99999998877654310           0112233 4555666666776532      6788888999999999986 44


Q ss_pred             ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          353 FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       353 ~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ....+    ..+ ..+.+.+++ . ..++.+.|.++||.+.++.  .+++||+++.+++++|+++++++|+++
T Consensus       311 ~~~~~----~~g-~~~~~~~~~-~-~~~~~~~l~~~gi~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          311 KGKVK----GRG-LMLGLELER-E-CKDYVLKALEKGLLINCTA--GKVLRFLPPLIIQKEHIDRAISVLREI  374 (375)
T ss_dssp             SSEEE----EET-TEEEEECSS-C-CHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCce----EEE-EEEEEEEcC-c-HHHHHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            32221    122 356677764 1 3478889988999887542  457999999889999999999999875

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.89  E-value=5.5e-22  Score=198.05  Aligned_cols=321  Identities=10%  Similarity=0.043  Sum_probs=210.9

Q ss_pred             CCceeecCC----C-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           69 DRVFNFAAG----P-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        69 ~~~~l~~~g----p-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      +..++++.|    + +..++.|++++.+.+.++. .+..     .+   .....+++++.+++++|.+.+ +++++ +|+
T Consensus        45 ~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~-~~~~-----~~---~~~~~~~l~~~la~~~~~~~~-~v~~~-~gg  113 (395)
T 1vef_A           45 NEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLM-AMPQ-----TL---PTPMRGEFYRTLTAILPPELN-RVFPV-NSG  113 (395)
T ss_dssp             CEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCC-CCCT-----TS---CCHHHHHHHHHHHHTSCTTEE-EEEEE-SSH
T ss_pred             CEEEEccCccccccCCCCCHHHHHHHHHHHHhCC-CCcc-----cc---CCHHHHHHHHHHHHhcCCCcC-EEEEc-CcH
Confidence            334555443    3 3478999999999886532 1111     11   124567899999999987654 67665 789


Q ss_pred             HHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-Cce---EEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610          144 TTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQ---VIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC  215 (430)
Q Consensus       144 T~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~---~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~  215 (430)
                      ++|+..++..+.  .+||+|++....+.+... ......| +..   .++...+...-...|+++++  +++++++|+++
T Consensus       114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~  192 (395)
T 1vef_A          114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTM-GSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILE  192 (395)
T ss_dssp             HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSH-HHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCch-hhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEe
Confidence            999999887763  578898887765543211 1122223 211   01111000000024677777  67889999998


Q ss_pred             ecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC----cccccc--ccEEEeCCCcccc-CCccEEEEEcHH
Q 043610          216 ANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK----PVDVTR--FGVIYAGAQKNVG-PSGVTIVIVRKD  280 (430)
Q Consensus       216 ~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~----~idl~~--~d~~~~s~~K~~g-p~G~g~l~v~~~  280 (430)
                      +++++||.+.|      +|.++ +++|+++++|++|+ ++..    +++...  .|++  +++|+++ +.++|+++++++
T Consensus       193 ~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~  270 (395)
T 1vef_A          193 PVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMREE  270 (395)
T ss_dssp             SEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEHH
T ss_pred             CccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehHH
Confidence            88889998765      34454 58999999999998 5422    223222  2555  6699996 456999999999


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +++.+.+. .          . ....+++...++++..+++.+.+    +.+.++.+++++++++.|++ .+..++. ..
T Consensus       271 ~~~~l~~~-~----------~-~~~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~l~~~l~~-~~~~~~~-~~  332 (395)
T 1vef_A          271 VARSMPKG-G----------H-GTTFGGNPLAMAAGVAAIRYLER----TRLWERAAELGPWFMEKLRA-IPSPKIR-EV  332 (395)
T ss_dssp             HHHTSCTT-S----------S-CCSSTTCHHHHHHHHHHHHHHHH----HTTHHHHHHHHHHHHHHHHT-SCCTTEE-EE
T ss_pred             HHhhhccC-C----------c-CCCcCCCHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHH-hhcCceE-EE
Confidence            87765321 0          0 11235677888888889987653    35678888999999999986 4432111 00


Q ss_pred             CCCccceEEEEcCCCchhHHHHHHHH-HcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          361 SVRSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ...+ ..+.+.+++ . ..++.+.|. ++||.+.++.  .+++||+++.+++++|+++++++|++++
T Consensus       333 ~~~g-~~~~~~~~~-~-~~~l~~~l~~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          333 RGMG-LMVGLELKE-K-AAPYIARLEKEHRVLALQAG--PTVIRFLPPLVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             EEET-TEEEEEESS-C-SHHHHHHHHHHHCEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEE-EEEEEEEcC-h-HHHHHHHHHHHCCeEEecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            1122 456677764 2 347889998 8999987642  4589999998899999999999999876

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.88  E-value=6.8e-21  Score=192.32  Aligned_cols=319  Identities=9%  Similarity=0.001  Sum_probs=207.0

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN  158 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g  158 (430)
                      .+.|+.+++++.+.+..    +       .+.. ....+.++|+.+++++|.+   +++++ +|+|++++.++.++. +|
T Consensus        28 ~~~p~~~~~a~~~~~~~----~-------~y~~-~~~~~~~l~~~la~~~~~~---~v~~~-~ggt~al~~~l~~l~-~g   90 (424)
T 2po3_A           28 RIDRARLYERLDRALDS----Q-------WLSN-GGPLVREFEERVAGLAGVR---HAVAT-CNATAGLQLLAHAAG-LT   90 (424)
T ss_dssp             CCCHHHHHHHHHHHHHH----T-------CCSS-SCHHHHHHHHHHHHHHTSS---EEEEE-SCHHHHHHHHHHHHT-CC
T ss_pred             CCChHHHHHHHHHHHhc----C-------Cccc-CCHHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHcC-CC
Confidence            45577999999887753    1       1111 1134568899999999984   67765 789999999998884 78


Q ss_pred             CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-c
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-K  232 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~  232 (430)
                      |+|++..+++.+..  ..++..| +++.++..+   .+..+|+++++  +++++++|+++|   ++|...+  +|.++ +
T Consensus        91 d~Vlv~~~~~~~~~--~~~~~~G~~~~~v~~~~---~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~  162 (424)
T 2po3_A           91 GEVIMPSMTFAATP--HALRWIGLTPVFADIDP---DTGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVAD  162 (424)
T ss_dssp             SEEEEESSSCTHHH--HHHHHTTCEEEEECBCT---TTSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHH
T ss_pred             CEEEECCCccHHHH--HHHHHcCCEEEEEecCC---CcCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHH
Confidence            99998887777653  3455667 777777643   12347888887  678899999875   7899888  78886 6


Q ss_pred             CCCcEEEEeccCcCCCCc--cccccc-cEEEeCCC--ccccCCccEEEEEc-HHHHhccCCCCCccccccchhhcCCCCC
Q 043610          233 NSTGILVADMSSNFCSKP--VDVTRF-GVIYAGAQ--KNVGPSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYN  306 (430)
Q Consensus       233 ~~g~~lvvD~a~s~G~~~--idl~~~-d~~~~s~~--K~~gp~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~  306 (430)
                      ++|+++++|++|++|...  ..+..+ |+++.|+|  |++++...|+++.+ +++++.+.+....  .+.. .......+
T Consensus       163 ~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~--~~~~-~~~~~~~g  239 (424)
T 2po3_A          163 EHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNF--GFDL-PGGSPAGG  239 (424)
T ss_dssp             HTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBT--TTTC-TTCCTTCC
T ss_pred             HcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhc--Cccc-cccccccC
Confidence            899999999999976641  122222 68888877  88876446999988 7776654321000  0000 00000111


Q ss_pred             CccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-CCCCCccceEEEEcCC---CchhHHHH
Q 043610          307 TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EKSVRSFMNVPFTLEK---SDLEAEFV  382 (430)
Q Consensus       307 T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~~~rs~~iv~f~~~~---~~~~~~~~  382 (430)
                      +.......++..++..+.   +++.+.++..++++++++.|.+..|+.+... +.......++.+.+++   .....++.
T Consensus       240 ~~~~~~~~~aa~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~  316 (424)
T 2po3_A          240 TNAKMSEAAAAMGLTSLD---AFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVM  316 (424)
T ss_dssp             CBCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHH
T ss_pred             cCCCcCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHH
Confidence            110011122223333222   4677888899999999999987558877531 1111222355566652   11123788


Q ss_pred             HHHHHcCCeecCCCC-C---------C------C-------eeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          383 KEAAKEKMVQLKGHR-S---------V------G-------GMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       383 ~~L~~~Gi~~~~g~~-~---------~------g-------~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.|.++||.+.+... .         .      +       .||++++.+++++|+++++++|++++++
T Consensus       317 ~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~  385 (424)
T 2po3_A          317 EVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATR  385 (424)
T ss_dssp             HHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhh
Confidence            899999998754211 0         0      1       1888888999999999999999988753

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.88  E-value=1.4e-21  Score=197.15  Aligned_cols=278  Identities=13%  Similarity=0.013  Sum_probs=184.7

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   +++++ +|+++|++.++.+++++||+|++....+.+..  +...+++.| ++..++.   
T Consensus        82 p~~~~le~~lA~l~g~~---~~i~~-ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~---  154 (415)
T 2fq6_A           82 LTHFSLQQAMCELEGGA---GCVLF-PCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP---  154 (415)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT---
T ss_pred             chHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC---
Confidence            34568899999999985   34555 67899999999999999999998777666543  112234567 6655543   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC--CCcEEEEeccCcCC--CCccccccccEEEeC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN--STGILVADMSSNFC--SKPVDVTRFGVIYAG  262 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~--~g~~lvvD~a~s~G--~~~idl~~~d~~~~s  262 (430)
                            .|+++++  ++++|++|++++++|++|.++|  +|.++ ++  +|+++++|++|+.+  ..|+++ ..|+++.|
T Consensus       155 ------~d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~-g~Div~~S  227 (415)
T 2fq6_A          155 ------LIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDF-GIDVSIQA  227 (415)
T ss_dssp             ------TCGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGG-TCSEEEEE
T ss_pred             ------CCHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcccc-CCeEEEEe
Confidence                  2567777  7889999999999999999999  78886 68  99999999999855  445543 34899999


Q ss_pred             CCccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610          263 AQKNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK  339 (430)
Q Consensus       263 ~~K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l  339 (430)
                      +||++|++|   .|+++.++++++.+..       +.   ..  ..++.+....+.+..+++.      +....++..+.
T Consensus       228 ~sK~lg~~g~~~~G~l~~~~~~~~~l~~-------~~---~~--~G~~~~~~~a~~~~~~l~~------l~~r~~~~~~n  289 (415)
T 2fq6_A          228 ATKYLVGHSDAMIGTAVCNARCWEQLRE-------NA---YL--MGQMVDADTAYITSRGLRT------LGVRLRQHHES  289 (415)
T ss_dssp             TTTTTTCSSSCCCEEEEECTTTHHHHHH-------HH---HH--TTCCCCHHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred             CccccCCCCCceEEEEEeCHHHHHHHHH-------HH---Hh--cCCCCCHHHHHHHHhhhhH------HHHHHHHHHHH
Confidence            999998766   6999998876654321       10   00  1123333334444444543      23455566667


Q ss_pred             HHHHHHHHHccCCcee--cCC---CCC--------CCccceEEEEcCCC-ch-hH-HHHHHHHHcCCeecCC-------C
Q 043610          340 AELLYNVIDGSNGFYK--CPV---EKS--------VRSFMNVPFTLEKS-DL-EA-EFVKEAAKEKMVQLKG-------H  396 (430)
Q Consensus       340 ~~~l~~~l~~~~G~~~--~~~---~~~--------~rs~~iv~f~~~~~-~~-~~-~~~~~L~~~Gi~~~~g-------~  396 (430)
                      +..+.+.|.+.+++.-  ++.   .+.        ...+.+++|.+++. .. +. .|+..|...++.+..|       +
T Consensus       290 ~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~  369 (415)
T 2fq6_A          290 SLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILA  369 (415)
T ss_dssp             HHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEE
T ss_pred             HHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEe
Confidence            7778888876433332  221   110        12356889999752 11 12 3444443222222111       0


Q ss_pred             ----------------CCCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          397 ----------------RSVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       397 ----------------~~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                                      ...+.||+|++..+++++|+.+.++|++
T Consensus       370 ~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~  413 (415)
T 2fq6_A          370 NQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR  413 (415)
T ss_dssp             ECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             cCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence                            0135799999999999999999999875

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.88  E-value=5.5e-22  Score=198.78  Aligned_cols=314  Identities=10%  Similarity=0.017  Sum_probs=199.4

Q ss_pred             eecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHh
Q 043610           73 NFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPL  152 (430)
Q Consensus        73 l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~  152 (430)
                      .+...|....+.+.+++.. +.    .+.+.+..+..   .....+++++.+++++|.+   +++++ +||+++++.++.
T Consensus        30 ~d~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~---~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~~l~   97 (398)
T 2rfv_A           30 PIFQTSTFVFDSAEQGAAR-FA----LEESGYIYTRL---GNPTTDALEKKLAVLERGE---AGLAT-ASGISAITTTLL   97 (398)
T ss_dssp             CCCCCSBCCCSSHHHHHHH-C---------CCSBTTT---CCHHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHH
T ss_pred             CCcCCCccccCCHHHHHHh-hc----CCCCCCceeCC---CChHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHH
Confidence            3445555666667776652 11    11111111111   1245678999999999986   45665 467899999999


Q ss_pred             hcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC-
Q 043610          153 NLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK-  226 (430)
Q Consensus       153 sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p-  226 (430)
                      +++++||+|++..+.|.+..  +...++..| +++.++.         .|+++++  +++++++|++++++|+||.+.| 
T Consensus        98 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l  168 (398)
T 2rfv_A           98 TLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA---------AKPEEIRAAMRPETKVVYIETPANPTLSLVDI  168 (398)
T ss_dssp             HHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT---------TSHHHHHHHCCTTEEEEEEESSBTTTTBCCCH
T ss_pred             HHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC---------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCH
Confidence            99899999998877666542  111235567 6555543         2567776  7789999999999999999999 


Q ss_pred             -CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcccc-CCc--cEEEEEcHHHHh-ccCCCCCccccccchh
Q 043610          227 -EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKNVG-PSG--VTIVIVRKDLLG-NAQDKTPLMLDYKIHD  299 (430)
Q Consensus       227 -ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~~g-p~G--~g~l~v~~~~~~-~~~~~~p~~~~~~~~~  299 (430)
                       +|.++ +++|+++++|++|+.+..+..+. ..|+++.|+||+++ |.+  .|+++++++.++ .+.+    +.      
T Consensus       169 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~----~~------  238 (398)
T 2rfv_A          169 ETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV----GL------  238 (398)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT----HH------
T ss_pred             HHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH----HH------
Confidence             78886 68999999999999776532221 24799999999996 555  499999998876 3321    00      


Q ss_pred             hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC--------------CceecCCCCCCCcc
Q 043610          300 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN--------------GFYKCPVEKSVRSF  365 (430)
Q Consensus       300 ~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~--------------G~~~~~~~~~~rs~  365 (430)
                      .. ...++.+...++++..+++.+      +...++..+..+.+.+.|.+..              ++++..... ....
T Consensus       239 ~~-~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~-~~~g  310 (398)
T 2rfv_A          239 KD-ITGGCMSPFNAWLTLRGVKTL------GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQM-SLPG  310 (398)
T ss_dssp             HH-TTCCCCCHHHHHHHHHHHTTH------HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHC-SSCC
T ss_pred             Hh-CCCCCCCHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhC-CCCc
Confidence            00 012467777777777777533      3334445556666677776521              111111000 1123


Q ss_pred             ceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC-------------------------CCCeeEEeecCCCCHHHHHHHH
Q 043610          366 MNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR-------------------------SVGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       366 ~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~-------------------------~~g~iRis~~~~~t~edv~~ll  419 (430)
                      .++.|.+++...+. ++.+++...|+.+..|..                         ..+.+|+|++..++++++++++
T Consensus       311 ~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~  390 (398)
T 2rfv_A          311 GIISFEIAGGLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLE  390 (398)
T ss_dssp             SEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHH
T ss_pred             eEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHH
Confidence            56778887411111 233333333555443410                         1468999999999999999999


Q ss_pred             HHHHHH
Q 043610          420 AFMKDF  425 (430)
Q Consensus       420 ~~L~~~  425 (430)
                      ++|+++
T Consensus       391 ~al~~~  396 (398)
T 2rfv_A          391 HAIRKA  396 (398)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            999864

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.88  E-value=1.6e-21  Score=208.63  Aligned_cols=300  Identities=11%  Similarity=-0.001  Sum_probs=209.5

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKY  194 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~  194 (430)
                      .++++++.+|+++|++.  . +++++|+|+++.+++.+++++||+|++..+.|.+.... .++..| +++.++...+ ++
T Consensus       174 ~i~e~e~~lA~~~gae~--~-i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~-~~~l~Ga~~v~v~~~~~-~~  248 (730)
T 1c4k_A          174 PAVAAEKHAARVYNADK--T-YFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS-ALAMAGGRPVYLQTNRN-PY  248 (730)
T ss_dssp             HHHHHHHHHHHHTTCSE--E-EEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH-HTTTTCCEEEEECEEEC-TT
T ss_pred             HHHHHHHHHHHHHCCCc--E-EEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH-HHHHCCCEEEEEeCCcc-cc
Confidence            57899999999999974  4 55668888999999999999999999888887765321 134456 6666654321 23


Q ss_pred             C--CCCCcccc-----c--cCCC------c----cEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC----C
Q 043610          195 T--KIPNFDAL-----E--QNPD------A----KYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC----S  248 (430)
Q Consensus       195 g--~~~d~~~l-----~--i~~~------~----~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G----~  248 (430)
                      +  ..+|++++     +  +.++      +    ++|+++++ |++|.+.|  +|.++ +++|+++++|++|+.+    .
T Consensus       249 ~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~  327 (730)
T 1c4k_A          249 GFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIP  327 (730)
T ss_dssp             CCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSG
T ss_pred             CccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCc
Confidence            2  13677888     6  5554      5    89999886 68999999  78886 7899999999998632    1


Q ss_pred             -----Cccccc--ccc----EEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhh--cCCCCCCccHHHHH
Q 043610          249 -----KPVDVT--RFG----VIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE--NNSLYNTPPCYCIY  314 (430)
Q Consensus       249 -----~~idl~--~~d----~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~T~~~~~~~  314 (430)
                           .+++++  ..|    +++.|+||+++ |.|.|+++++++.+..-    ..+.+.....+  .....++|+...+.
T Consensus       328 ~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~----~~~i~~~~~~~~~~~~~stsp~~~~ia  403 (730)
T 1c4k_A          328 MMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQ----LRYCDHKHFNNSFNLFMSTSPFYPMYA  403 (730)
T ss_dssp             GGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTS----TTCCCHHHHHHHHHHHSCSSCCHHHHH
T ss_pred             ccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCc----ccccCHHHHHHHHHHhCCCCCcHHHHH
Confidence                 123332  235    89999999995 88889999988765210    01111100000  01123688999999


Q ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCCC--------------------------------C
Q 043610          315 MCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVEK--------------------------------S  361 (430)
Q Consensus       315 a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~~--------------------------------~  361 (430)
                      ++..|++++...+| ++..++..++++++++.|.+ .+|++++..+.                                .
T Consensus       404 al~aA~~~l~~~~g-~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  482 (730)
T 1c4k_A          404 ALDVNAAMQEGEAG-RKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYE  482 (730)
T ss_dssp             HHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCT
T ss_pred             HHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhcccc
Confidence            99999987764233 55678889999999999987 57888763211                                0


Q ss_pred             -C-C-----ccceEEEEcCC----------CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          362 -V-R-----SFMNVPFTLEK----------SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       362 -~-r-----s~~iv~f~~~~----------~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                       . .     .++.++|..++          .+.+. ++.+.|.++||.+...  ..+.+|++++..+|++|+++++++|+
T Consensus       483 ~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~--~~~~ir~~~s~g~t~e~i~~Ll~aL~  560 (730)
T 1c4k_A          483 GYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKS--DLNSILFLMTPAETPAKMNNLITQLL  560 (730)
T ss_dssp             TCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEE--CSSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             ccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEEC--CCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence             0 0     13346777752          12344 6888999999987431  23579999999999999999999999


Q ss_pred             HHHHh
Q 043610          424 DFQAK  428 (430)
Q Consensus       424 ~~~~~  428 (430)
                      ++.+.
T Consensus       561 ~i~~~  565 (730)
T 1c4k_A          561 QLQRL  565 (730)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            88653

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.88  E-value=2.3e-21  Score=193.38  Aligned_cols=318  Identities=11%  Similarity=0.040  Sum_probs=207.3

Q ss_pred             CCCceeecCCC--CC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP--AN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp--~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.++|..+.  .+   .++.|++++.+.+.+... +..     ...   ....+++++.+++++|  .+ +++++ +|
T Consensus        35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~-----~~~---~~~~~~l~~~la~~~g--~~-~v~~~-~~  101 (392)
T 3ruy_A           35 GNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTL-TSR-----AFH---SDQLGPWYEKVAKLTN--KE-MVLPM-NT  101 (392)
T ss_dssp             CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSC-CCT-----TSE---ETTHHHHHHHHHHHHT--CS-EEEEE-SS
T ss_pred             CCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccc-ccc-----ccC---CHHHHHHHHHHHHhcC--CC-EEEEe-Cc
Confidence            34455565543  22   579999999998864311 110     011   1345688899999998  33 67775 78


Q ss_pred             HHHHHHHHHhhcCCC----------CCcEEEEeCChhHHHHHHHHHHhC-C-ce---EEecCCC-CcCCCCCCccccc--
Q 043610          143 ATTQFAAVPLNLCTP----------NDPVDYIVTGSWGDKAFKEAQKFC-N-PQ---VIWSGKA-EKYTKIPNFDALE--  204 (430)
Q Consensus       143 aT~a~~~~~~sl~~~----------gd~vl~~~~g~~~~~~~~~a~~~g-~-~~---~v~~~~~-~~~g~~~d~~~l~--  204 (430)
                      ++++++.++..+..+          +|+|++....+.+...  .+...+ . ..   ..+...+ .... ..|+++++  
T Consensus       102 gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~  178 (392)
T 3ruy_A          102 GAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTM--GAVSMSSNEEYKRGFGPMLPGIIVIP-YGDLEALKAA  178 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSH--HHHHTCSCTTTTTTCCSCCSSEEEEC-TTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCH--hhhhccCChhhccccCCCCCCCeeeC-cccHHHHHHH
Confidence            999999988765432          5688776666544321  111221 1 00   0000000 0011 12667777  


Q ss_pred             cCCCccEEEEeecCCCccccCC--C-Ccc---c-cCCCcEEEEeccCc-CCCC----ccccccc--cEEEeCCCccccC-
Q 043610          205 QNPDAKYLHICANETIHGVEFK--E-YPS---A-KNSTGILVADMSSN-FCSK----PVDVTRF--GVIYAGAQKNVGP-  269 (430)
Q Consensus       205 i~~~~~lv~i~~~~t~tG~~~p--e-i~~---~-~~~g~~lvvD~a~s-~G~~----~idl~~~--d~~~~s~~K~~gp-  269 (430)
                      +++++++|++++++|+||.+.|  + +.+   + +++|+++++|++|+ +|..    .++....  |++++  +|+++. 
T Consensus       179 l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~--SK~l~gG  256 (392)
T 3ruy_A          179 ITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYIL--GKALGGG  256 (392)
T ss_dssp             CCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTT
T ss_pred             hccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEE--chhhhCC
Confidence            6789999999999999999997  4 444   3 58999999999985 5431    2222222  56655  599854 


Q ss_pred             -CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          270 -SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       270 -~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                       ..+|++++++++++.+.+..           . ....+++...+.++..+|+.+..    +.+.++.+++++++++.|+
T Consensus       257 ~~~~G~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~L~  320 (392)
T 3ruy_A          257 VFPISCAAANRDILGVFEPGS-----------H-GSTFGGNPLACAVSIAALEVLEE----EKLTERSLQLGEKLVGQLK  320 (392)
T ss_dssp             TSCCEEEEECHHHHTTCCTTS-----------S-CCSSTTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHT
T ss_pred             hhhhEEEEECHHHHhhhccCC-----------c-CCCCCCCHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHH
Confidence             33899999999887653311           0 11236788888889999987643    5788899999999999998


Q ss_pred             ccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          349 GSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       349 ~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      + .+...+...+ ..+ ..+.+.+++  ...++.+.|.++||.+.++.  .+.+||+++..++++|+++++++|++++
T Consensus       321 ~-~~~~~~~~~~-~~g-~~~~~~~~~--~~~~l~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          321 E-IDNPMITEVR-GKG-LFIGIELNE--PARPYCEQLKAAGLLCKETH--ENVIRIAPPLVISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             T-CCCTTEEEEE-EET-TEEEEEESS--CSHHHHHHHHTTTEECCCBT--TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             H-hcCCCceEEE-eee-eEEEEEEcc--hHHHHHHHHHHCCcEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence            6 4322111001 122 345666664  23479999999999987753  4689999999999999999999999876

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.88  E-value=6e-22  Score=197.61  Aligned_cols=318  Identities=12%  Similarity=0.020  Sum_probs=201.8

Q ss_pred             CCceeecCC-------CCCCcHHHHHHHHH-HhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC------CCCc
Q 043610           69 DRVFNFAAG-------PANLPEKVLLKAQS-ELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI------PQEY  134 (430)
Q Consensus        69 ~~~~l~~~g-------p~~~~~~V~~a~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~------~~~~  134 (430)
                      +.+++|+.|       +.++++.|++++.+ .+.+....+..   ..   ..    ..++|+.++++++.      +++.
T Consensus        26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~---~~---~g----~~~lr~~la~~~~~~~~~~~~~~~   95 (397)
T 3fsl_A           26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYL---PM---EG----LNCYRHAIAPLLFGADHPVLKQQR   95 (397)
T ss_dssp             SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCC---CT---TC----CHHHHHHHHHHHHCTTCHHHHTTC
T ss_pred             CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCC---CC---Cc----hHHHHHHHHHHHhcCCcccccccc
Confidence            345666555       45666999999998 76431111111   10   11    23556666666643      2321


Q ss_pred             -EEEEEeCcHHHHHHHHH--hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--
Q 043610          135 -SVLFLQGGATTQFAAVP--LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--  206 (430)
Q Consensus       135 -~vv~~~~gaT~a~~~~~--~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--  206 (430)
                       +|++ ++|++++++.++  .+++++||+|++..+++.+.  ...++..| +++.++...+  .+..+|+++++  +.  
T Consensus        96 ~~i~~-t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~  170 (397)
T 3fsl_A           96 VATIQ-TLGGSGALKVGADFLKRYFPESGVWVSDPTWENH--VAIFAGAGFEVSTYPWYDE--ATNGVRFNDLLATLKTL  170 (397)
T ss_dssp             EEEEE-ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHH--HHHHHHTTCCEEEECCEET--TTTEECHHHHHHHHTTC
T ss_pred             eEEEE-cCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhH--HHHHHHcCCceEEEeeeec--cCCcCcHHHHHHHHHhC
Confidence             4565 589999999984  55678999999887777664  34566778 8888876321  12247888886  54  


Q ss_pred             -CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc-----ccc------ccccEEEeCCCcccc
Q 043610          207 -PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP-----VDV------TRFGVIYAGAQKNVG  268 (430)
Q Consensus       207 -~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~-----idl------~~~d~~~~s~~K~~g  268 (430)
                       ++++++++++++|+||.+++  +   |.++ +++|+++++|++++.....     ..+      .+..+++.|++|.+|
T Consensus       171 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~  250 (397)
T 3fsl_A          171 QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFS  250 (397)
T ss_dssp             CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT
T ss_pred             CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccccccc
Confidence             67899999999999999998  3   4444 5899999999998754432     111      112378899999999


Q ss_pred             CCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHH
Q 043610          269 PSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKK  339 (430)
Q Consensus       269 p~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l  339 (430)
                      ++|  +|++++   +++.++.+...      .....  ....++++...+.++..+++..  ..  ...++.++++++++
T Consensus       251 ~~G~riG~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~  322 (397)
T 3fsl_A          251 LYGERVGGLSVMCEDAEAAGRVLGQ------LKATV--RRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAM  322 (397)
T ss_dssp             CGGGCCEEEEEECSSHHHHHHHHHH------HHHHH--HTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCeeEEEEecCCHHHHHHHHHH------HHHHH--HhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            889  788875   34554432100      00000  0122355666666666555421  00  12467889999999


Q ss_pred             HHHHHHHHHccC---CceecCCCCCCCccceEEE-EcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610          340 AELLYNVIDGSN---GFYKCPVEKSVRSFMNVPF-TLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       340 ~~~l~~~l~~~~---G~~~~~~~~~~rs~~iv~f-~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv  415 (430)
                      ++++++.|.+..   |+.+..  +  .. +.+.+ .++    ...+.+.|.++||.+.+|.      |||+... ++++|
T Consensus       323 ~~~l~~~L~~~~~~~~~~~~~--~--~~-~~~~~~~~~----~~~~~~~l~~~gi~v~~g~------Ris~~~~-~~~~i  386 (397)
T 3fsl_A          323 RQELVKVLSTEMPERNFDYLL--N--QR-GMFSYTGLS----AAQVDRLREEFGVYLIASG------RMCVAGL-NTANV  386 (397)
T ss_dssp             HHHHHHHHHHHCTTSCCTHHH--H--CC-SSEEECCCC----HHHHHHHHHTTCEECCTTC------EEEGGGC-CTTTH
T ss_pred             HHHHHHHHHhcCCCCCceeec--C--Cc-eEEEecCCC----HHHHHHHHHhCCEEECCCC------eEEEEec-CHhhH
Confidence            999999998743   555432  1  11 22322 221    2245566788899998753      9998754 45779


Q ss_pred             HHHHHHHHHH
Q 043610          416 EKLVAFMKDF  425 (430)
Q Consensus       416 ~~ll~~L~~~  425 (430)
                      ++++++|+++
T Consensus       387 ~~~~~~l~~~  396 (397)
T 3fsl_A          387 QRVAKAFAAV  396 (397)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            9999999875

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.88  E-value=4.6e-21  Score=193.10  Aligned_cols=283  Identities=12%  Similarity=0.027  Sum_probs=187.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   +++++ +|+++|++.++.+++++||+|++....+.+..  +...++..| +++.++.   
T Consensus        56 ~~~~~l~~~la~~~g~~---~~~~~-~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---  128 (412)
T 2cb1_A           56 PTAKALEERLKALEGAL---EAVVL-ASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP---  128 (412)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS---
T ss_pred             hHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC---
Confidence            34678999999999985   57765 78999999999998899999998777665432  211133456 5554432   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC---ccccccccEEEeCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK---PVDVTRFGVIYAGA  263 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~---~idl~~~d~~~~s~  263 (430)
                             |+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++|+.+..   +++. ..|++++|+
T Consensus       129 -------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~-~~di~~~S~  200 (412)
T 2cb1_A          129 -------EPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAW-GAHVVVESL  200 (412)
T ss_dssp             -------SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGG-TCSEEEEET
T ss_pred             -------CHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCcccc-CCeEEEECC
Confidence                   356776  7889999999999999999999  78886 689999999999997732   3322 348999999


Q ss_pred             Ccccc-CCc-cEEEEEcHHHHh-----ccCCCCCccc-----------cccchhhcC--CCCC-CccHHHHHHHHHHHHH
Q 043610          264 QKNVG-PSG-VTIVIVRKDLLG-----NAQDKTPLML-----------DYKIHDENN--SLYN-TPPCYCIYMCGLVFEY  322 (430)
Q Consensus       264 ~K~~g-p~G-~g~l~v~~~~~~-----~~~~~~p~~~-----------~~~~~~~~~--~~~~-T~~~~~~~a~~~al~~  322 (430)
                      ||+++ |.| +|++++.++.+.     .+.+  |...           ++....+.+  ...| +.+....+.+...++ 
T Consensus       201 ~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~-  277 (412)
T 2cb1_A          201 TKWASGHGSVLGGAVLSRETELWRNYPQFLQ--PDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLE-  277 (412)
T ss_dssp             TTTTTCSSCCCCEEEEECCCSGGGGSGGGGC--C-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGG-
T ss_pred             cccccCCCCcEEEEEEecccccccccccccc--ccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCc-
Confidence            99995 666 788887652211     0100  1000           000000110  1112 223333332223333 


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CCCCC-----------CCccceEEEEcCCCchhHHHHHHHHHcC
Q 043610          323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PVEKS-----------VRSFMNVPFTLEKSDLEAEFVKEAAKEK  389 (430)
Q Consensus       323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~~~~-----------~rs~~iv~f~~~~~~~~~~~~~~L~~~G  389 (430)
                           .++...++..++++++.++|.+..++..+  +..+.           .....+++|.+ + + ..++.+.|.+.|
T Consensus       278 -----~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-~-~~~~~~~l~~~~  349 (412)
T 2cb1_A          278 -----TVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-D-LERASRFLGAIR  349 (412)
T ss_dssp             -----GHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-S-HHHHHHHHHHCS
T ss_pred             -----hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-C-HHHHHHHHHhCC
Confidence                 34556667778899999999876677643  21110           12346788998 4 2 235677788889


Q ss_pred             CeecCCC----------C------------------CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          390 MVQLKGH----------R------------------SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       390 i~~~~g~----------~------------------~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      |.+ .+.          .                  ..+.||+|++.++++++|++++++|++
T Consensus       350 i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~  411 (412)
T 2cb1_A          350 LLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA  411 (412)
T ss_dssp             SEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred             eee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence            887 441          1                  036799999999999999999999875

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.87  E-value=5.1e-20  Score=185.10  Aligned_cols=275  Identities=14%  Similarity=0.041  Sum_probs=183.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   +++++ +|+++++..++.+++++||+|++..+.+.+..  |...++..| +++.++..  
T Consensus        62 ~~~~~l~~~ia~~~g~~---~~i~~-~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~--  135 (404)
T 1e5e_A           62 PTVSNLEGKIAFLEKTE---ACVAT-SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA--  135 (404)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT--
T ss_pred             hHHHHHHHHHHHHhCCC---cEEEe-CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC--
Confidence            44568899999999985   45665 56789999999999999999998877665532  211455667 66655541  


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cC-CCcEEEEeccCcCCCC--ccccccccEEEeCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KN-STGILVADMSSNFCSK--PVDVTRFGVIYAGA  263 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~-~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~  263 (430)
                             |+++++  +++++++|++++++|+||.+.|  +|.++ ++ +|+++++|++|+.+..  ++++ ..|+++.|+
T Consensus       136 -------d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~-~~di~~~S~  207 (404)
T 1e5e_A          136 -------IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDF-GVDVVVHSA  207 (404)
T ss_dssp             -------STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGG-TCSEEEEET
T ss_pred             -------CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcccc-CCEEEEEcC
Confidence                   556776  7889999999999999999999  78886 68 9999999999997763  4432 347999999


Q ss_pred             Ccccc-CCc--cEEEEEcHHHHh-ccCCCCCccccccchhhcCCC-CCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610          264 QKNVG-PSG--VTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNSL-YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK  338 (430)
Q Consensus       264 ~K~~g-p~G--~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~-~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~  338 (430)
                      +|++| |.+  .|+++++++.++ .+.+...            .+ .++.+...++++..+++.      ++...++..+
T Consensus       208 sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~------------~~~g~~~~~~~~~~~~~~l~~------~~~~~~~~~~  269 (404)
T 1e5e_A          208 TKYINGHTDVVAGLICGKADLLQQIRMVGIK------------DITGSVISPHDAWLITRGLST------LNIRMKAESE  269 (404)
T ss_dssp             TTTTTCSSCCCCEEEEECHHHHHHHHHTCCC------------CCCCCCCCHHHHHHHHHHHTT------HHHHHHHHHH
T ss_pred             ccccCCCCCCeEEEEEECHHHHHHHHHHHHH------------hCCCCCCCHHHHHHHHHhHhH------HHHHHHHHHH
Confidence            99997 544  499999998877 5433111            11 134566666666666642      3445555566


Q ss_pred             HHHHHHHHHHccCCce--ecCCCCC-----------CCccceEEEEcCCCchhHHHHHHHHHcCCeecC---CC------
Q 043610          339 KAELLYNVIDGSNGFY--KCPVEKS-----------VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---GH------  396 (430)
Q Consensus       339 l~~~l~~~l~~~~G~~--~~~~~~~-----------~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g~------  396 (430)
                      ..+.+.+.+++...+.  ..+.-+.           ....+.+.|.+++  ...+..+.|.+.||....   |.      
T Consensus       270 ~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~  347 (404)
T 1e5e_A          270 NAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS--GFEGAKKLLDNLKLITLAVSLGGCESLIQ  347 (404)
T ss_dssp             HHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--HHHHHHHHHHTCSSSEESSCCCSSSCEEE
T ss_pred             HHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC--CHHHHHHHHHhCCCceeccCCCCcceeee
Confidence            6667777776532221  1110000           0113567788764  222455566777875321   21      


Q ss_pred             -------------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          397 -------------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       397 -------------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                                         ...+.+|||++.    ||++++++.|+++++
T Consensus       348 ~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~  393 (404)
T 1e5e_A          348 HPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLD  393 (404)
T ss_dssp             CGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred             cccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence                               013679999996    667777766666543

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.87  E-value=6.7e-22  Score=197.22  Aligned_cols=319  Identities=13%  Similarity=0.032  Sum_probs=205.7

Q ss_pred             CCceeecCCC-------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-CC--CCCcEEEE
Q 043610           69 DRVFNFAAGP-------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-NI--PQEYSVLF  138 (430)
Q Consensus        69 ~~~~l~~~gp-------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-g~--~~~~~vv~  138 (430)
                      +..++|+.|-       .++++.|++++.+.+.+..        ...+.+.  .-..++|+.+++++ +.  +++ +|++
T Consensus        26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~--~g~~~lr~~la~~~~~~~~~~~-~v~~   94 (394)
T 2ay1_A           26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETET--------TKTYAGL--SGEPEFQKAMGELILGDGLKSE-TTAT   94 (394)
T ss_dssp             TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCC--------CCCCCCS--SCCHHHHHHHHHHHHGGGCCGG-GEEE
T ss_pred             ccccccccceeeCCCCCccCcHHHHHHHHHhcCCcc--------cCCCCCC--CCcHHHHHHHHHHHhCCCCCcc-cEEE
Confidence            3456666653       3567899999988765311        1111110  11236677777776 54  444 6776


Q ss_pred             -EeCcHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---Cc
Q 043610          139 -LQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DA  209 (430)
Q Consensus       139 -~~~gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~  209 (430)
                       .++|+++|++.++..+.  .+||+|++..+++.+..  ..++..| +++.++...+  .+..+|+++++  +++   ++
T Consensus        95 ~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~~~  170 (394)
T 2ay1_A           95 LATVGGTGALRQALELARMANPDLRVFVSDPTWPNHV--SIMNFMGLPVQTYRYFDA--ETRGVDFEGMKADLAAAKKGD  170 (394)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHH--HHHHHHTCCEEEEECEET--TTTEECHHHHHHHHHTCCTTC
T ss_pred             EecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHH--HHHHHcCCceEEEecccc--cCCccCHHHHHHHHHhCCCCC
Confidence             14789999999887763  48999998888777643  4456677 8887876321  12246788876  432   46


Q ss_pred             cEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-------ccc-cccc--c-EEEeCCCccccCCc-
Q 043610          210 KYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-------PVD-VTRF--G-VIYAGAQKNVGPSG-  271 (430)
Q Consensus       210 ~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-------~id-l~~~--d-~~~~s~~K~~gp~G-  271 (430)
                      +++++++++|+||.+++  +   |.++ +++|+++++|++|+....       ++. +...  + +++.|++|++|++| 
T Consensus       171 ~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  250 (394)
T 2ay1_A          171 MVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRE  250 (394)
T ss_dssp             EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGG
T ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCC
Confidence            77888999999999998  3   4444 578999999999885432       222 3222  2 67889999999889 


Q ss_pred             -cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--H--hcCHHHHHHHHHHHHHHH
Q 043610          272 -VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--E--LGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       272 -~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~--~~g~~~v~~~~~~l~~~l  343 (430)
                       +|++++   ++++++.+..    .+  ...  .....+++|...++++..+|+...  +  ..+++.+.++++++++++
T Consensus       251 riG~~~~~~~~~~~~~~l~~----~~--~~~--~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l  322 (394)
T 2ay1_A          251 RTGCLLALCADAATRELAQG----AM--AFL--NRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQL  322 (394)
T ss_dssp             CEEEEEEECSSHHHHHHHHH----HH--HHH--HHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEeCCHHHHHHHHH----HH--HHH--HhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             599998   6765443210    00  000  001223456677777777776430  0  125788899999999999


Q ss_pred             HHHHHccC---CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610          344 YNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       344 ~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~  420 (430)
                      .+.|++..   ++++..  +  .....+.+.++    ...+...|.++||.+.+|      +|||++ +++++|++++++
T Consensus       323 ~~~L~~~~~~~~~~~~~--~--~~g~~~~~~~~----~~~~~~~l~~~gi~v~~~------~Ris~~-~~~~~~i~~~~~  387 (394)
T 2ay1_A          323 AGELRDLSGSDRFGFVA--E--HRGMFSRLGAT----PEQVKRIKEEFGIYMVGD------SRINIA-GLNDNTIPILAR  387 (394)
T ss_dssp             HHHHHHHHTSSTTTHHH--H--CCSSEEECCCC----HHHHHHHHHHHCEECCTT------CEEEGG-GCCTTTHHHHHH
T ss_pred             HHHHHhcCCCCCeeEEc--C--CceEEEeeCCC----HHHHHHHHHhCCEEecCC------CeEEee-cCCHhhHHHHHH
Confidence            99998632   244432  1  11222222222    224666677889998753      799988 578999999999


Q ss_pred             HHHHH
Q 043610          421 FMKDF  425 (430)
Q Consensus       421 ~L~~~  425 (430)
                      +|+++
T Consensus       388 ~l~~~  392 (394)
T 2ay1_A          388 AIIEV  392 (394)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            99875

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.87  E-value=6.1e-21  Score=191.30  Aligned_cols=278  Identities=13%  Similarity=0.001  Sum_probs=188.0

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH-H-HHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA-F-KEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~-~-~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   +.+++ +||++|++.++.+++++||+|++....|.+... . ..++..| ++..++.   
T Consensus        65 ~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---  137 (398)
T 1gc0_A           65 PTLNLLEARMASLEGGE---AGLAL-ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM---  137 (398)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT---
T ss_pred             hHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC---
Confidence            45678999999999986   34555 467899999999988999999988777665421 1 1124456 5544432   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCc
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQK  265 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K  265 (430)
                            .|+++++  +++++++|++++++|+||.+.|  +|.++ +++|+++++|++|+.+.....+. ..|+++.|+||
T Consensus       138 ------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK  211 (398)
T 1gc0_A          138 ------ADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATK  211 (398)
T ss_dssp             ------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTT
T ss_pred             ------CCHHHHHHhcCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCcc
Confidence                  3567776  7889999999999999999999  78886 78999999999998776433332 24799999999


Q ss_pred             ccc-CCc--cEEEEEcHHHHh-ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          266 NVG-PSG--VTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       266 ~~g-p~G--~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      ++| |.+  .|+++++++.++ .+.+.    ..       ....++.+....+++..+++.      ++...++..+.+.
T Consensus       212 ~~~~~~~~~~G~l~~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~  274 (398)
T 1gc0_A          212 YLSGHGDITAGIVVGSQALVDRIRLQG----LK-------DMTGAVLSPHDAALLMRGIKT------LNLRMDRHCANAQ  274 (398)
T ss_dssp             TTTCSSSCCCEEEEECHHHHHHHHHTH----HH-------HHTCCCCCHHHHHHHHHHHTT------HHHHHHHHHHHHH
T ss_pred             ccCCCCCCeEEEEEEChHHHHHHHHHH----hh-------ccCCCCCCHHHHHHHHhccch------HHHHHHHHHHHHH
Confidence            997 554  599999988765 33210    00       001246677666666666653      3445556666666


Q ss_pred             HHHHHHHccCCce--------------ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC---CC--------
Q 043610          342 LLYNVIDGSNGFY--------------KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---GH--------  396 (430)
Q Consensus       342 ~l~~~l~~~~G~~--------------~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g~--------  396 (430)
                      .+.+.|.+..++.              +.. ........+++|.+++  ...+..+.|.+.|+....   |.        
T Consensus       275 ~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~--~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~  351 (398)
T 1gc0_A          275 VLAEFLARQPQVELIHYPGLASFPQYTLAR-QQMSQPGGMIAFELKG--GIGAGRRFMNALQLFSRAVSLGDAESLAQHP  351 (398)
T ss_dssp             HHHHHHHTCTTEEEEEEC-----------------CCTTEEEEEETT--HHHHHHHHHHHCSSSEECSCCSCSSCEEECG
T ss_pred             HHHHHHhcCCCeeEEECCCCCCCcCHHHHH-hhCCCCceEEEEEECC--CHHHHHHHHHhCCCceeccCCCCcceeeecc
Confidence            7777776532222              111 0001234578888864  222455566777766432   20        


Q ss_pred             -----C------------CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          397 -----R------------SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       397 -----~------------~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                           .            ..+.||||++..+++++|+.+.++|+++
T Consensus       352 ~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~  397 (398)
T 1gc0_A          352 ASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS  397 (398)
T ss_dssp             GGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence                 0            1368999999999999999999999875

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.87  E-value=2.3e-21  Score=195.55  Aligned_cols=319  Identities=13%  Similarity=0.042  Sum_probs=202.8

Q ss_pred             CCceeecCC-------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC------CCCc-
Q 043610           69 DRVFNFAAG-------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI------PQEY-  134 (430)
Q Consensus        69 ~~~~l~~~g-------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~------~~~~-  134 (430)
                      +++++|+.|       ++++++.|++++.+.+.+....+..   ..   ..    ..++|+.++++++.      +++. 
T Consensus        49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~---~~---~g----~~~lr~~ia~~l~~~~~~~~~~~~~  118 (420)
T 4f4e_A           49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYL---PI---DG----IAAYDASVQKLLLGDDSPLIAAGRV  118 (420)
T ss_dssp             SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCC---CT---TC----CHHHHHHHHHHHHCTTCHHHHTTCE
T ss_pred             CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCC---CC---CC----cHHHHHHHHHHhcCCCccccccCce
Confidence            456777776       3456689999999887641111111   11   11    12455566665533      2221 


Q ss_pred             EEEEEeCcHHHHHHHH--HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC---
Q 043610          135 SVLFLQGGATTQFAAV--PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN---  206 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~--~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~---  206 (430)
                      +|++ ++|++++++.+  +.+++++||+|++..+++.++  ...++..| +++.++..++  .+..+|+++++  ++   
T Consensus       119 ~i~~-t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~--~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~  193 (420)
T 4f4e_A          119 VTAQ-ALGGTGALKIGADFLRTLNPKAKVAISDPSWENH--RALFDMAGFEVVAYPYYDA--KTNGVNFDGMLAALNGYE  193 (420)
T ss_dssp             EEEE-EEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHH--HHHHHHTTCCEEEEECEET--TTTEECHHHHHHHHTTCC
T ss_pred             EEEE-CCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhH--HHHHHHcCCeEEEeeeecc--ccCccCHHHHHHHHHhCC
Confidence            5666 47899999998  456678999999988877664  34566678 8888887321  12347888876  54   


Q ss_pred             CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc-----ccc------ccccEEEeCCCccccC
Q 043610          207 PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP-----VDV------TRFGVIYAGAQKNVGP  269 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~-----idl------~~~d~~~~s~~K~~gp  269 (430)
                      ++++++++++++||||.+++  +   |.++ +++|+++++|++++.....     ..+      .+..+++.|++|.+|+
T Consensus       194 ~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~  273 (420)
T 4f4e_A          194 PGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSL  273 (420)
T ss_dssp             TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTC
T ss_pred             CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcC
Confidence            78899999999999999998  3   4444 5889999999997643321     111      1123788999999998


Q ss_pred             Cc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--H--hcCHHHHHHHHHHHH
Q 043610          270 SG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--E--LGGLNEVEKMNRKKA  340 (430)
Q Consensus       270 ~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~--~~g~~~v~~~~~~l~  340 (430)
                      +|  +|++++   +++.++.+..      .+....  .....+++...+.++..+++...  +  +..++.+++++++++
T Consensus       274 ~G~RiG~~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~  345 (420)
T 4f4e_A          274 YGERVGALSIITDSKDEAARVLS------QLKRVI--RTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMR  345 (420)
T ss_dssp             GGGCEEEEEEECSSHHHHHHHHH------HHHHHH--HTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEEEcCCHHHHHHHHH------HHHHHH--hcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            89  888864   3555443110      000000  01223455666666666554310  0  124678899999999


Q ss_pred             HHHHHHHHcc---CCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610          341 ELLYNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       341 ~~l~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~  416 (430)
                      +++++.|++.   .|+.+..  +  .. +.+.+ +.   .+. .+.+.|.++||.+.++      .|||+.. .++++|+
T Consensus       346 ~~l~~~L~~~~~~~~~~~~~--~--~~-g~~~~-~~---~~~~~~~~~l~~~gI~v~~~------~Ris~~~-~~~~~i~  409 (420)
T 4f4e_A          346 NGLVERLKAAGIERDFSFIN--A--QR-GMFSY-SG---LTSAQVDRLREEFGIYAVST------GRICVAA-LNTRNLD  409 (420)
T ss_dssp             HHHHHHHHHTTCSSCCTHHH--H--SC-SSEEE-CC---CCHHHHHHHHHHHCEECCTT------SEEEGGG-CCTTTHH
T ss_pred             HHHHHHHHhcCCCCCceeEC--C--Cc-cEEEE-eC---CCHHHHHHHHHhCCEEecCC------CeEEEec-CCHHHHH
Confidence            9999999974   2554432  1  12 22322 11   223 4556677889998764      3999874 3566799


Q ss_pred             HHHHHHHHHH
Q 043610          417 KLVAFMKDFQ  426 (430)
Q Consensus       417 ~ll~~L~~~~  426 (430)
                      +++++|++++
T Consensus       410 ~~~~~l~~~l  419 (420)
T 4f4e_A          410 VVANAIAAVL  419 (420)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999876

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.87  E-value=3.1e-21  Score=193.12  Aligned_cols=279  Identities=11%  Similarity=0.062  Sum_probs=191.0

Q ss_pred             HHHHHHHHHHhCC-----CCCcEEEEEeCcHHHHHHHHHhhcCCCCC----cEEEEeCChhHHHHHHHHHHhC-CceEEe
Q 043610          118 EKAESDLRALLNI-----PQEYSVLFLQGGATTQFAAVPLNLCTPND----PVDYIVTGSWGDKAFKEAQKFC-NPQVIW  187 (430)
Q Consensus       118 ~~~r~~la~l~g~-----~~~~~vv~~~~gaT~a~~~~~~sl~~~gd----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~  187 (430)
                      .++|+.++++++.     .++.+|+++ +|+++++..++..++++||    +|++..+.+.++  ...++..| +++.++
T Consensus        71 ~~lr~aia~~~~~~g~~~~~~~~i~~t-~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~--~~~~~~~g~~~~~~~  147 (391)
T 3bwn_A           71 PELEDAIKDLHGVVGNAATEDRYIVVG-TGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTY--VEETTYVRSGMYKWE  147 (391)
T ss_dssp             HHHHHHHHHHHHHHCSBCCSSSEEEEE-EHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHH--HHHHHTTCBTTEEEE
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCeEEEe-CChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhH--HHHHHHcCCeEEEec
Confidence            3566677776662     232277775 7899999999999988999    888777766654  34556678 777666


Q ss_pred             cCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCCCCccc-cCCCcEEEEeccCcCCCC-cccc-ccccEEEeCCC
Q 043610          188 SGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSA-KNSTGILVADMSSNFCSK-PVDV-TRFGVIYAGAQ  264 (430)
Q Consensus       188 ~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~pei~~~-~~~g~~lvvD~a~s~G~~-~idl-~~~d~~~~s~~  264 (430)
                      .+.          +.++ .+++++|++++++||||.++++|.+. +.+++++++|+++..+.. ++.. .+.++++.|++
T Consensus       148 ~d~----------~~l~-~~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~S  216 (391)
T 3bwn_A          148 GDA----------WGFD-KKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFS  216 (391)
T ss_dssp             EES----------TTCC-CCSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHH
T ss_pred             CCH----------HHcC-CCCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEech
Confidence            531          1222 36789999999999999999976552 233499999999886432 2322 12258999999


Q ss_pred             ccccCCc--cEEEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH--------hcCHHHHH
Q 043610          265 KNVGPSG--VTIVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE--------LGGLNEVE  333 (430)
Q Consensus       265 K~~gp~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~--------~~g~~~v~  333 (430)
                      |.+|++|  +|++++ ++++++.+....    .        ....+++.+.+.++..+|+...+        ...++.++
T Consensus       217 K~~g~~GlRiG~~~~~~~~l~~~l~~~~----~--------~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~  284 (391)
T 3bwn_A          217 KITGHAGSRIGWALVKDKEVAKKMVEYI----I--------VNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGR  284 (391)
T ss_dssp             HHHSCGGGCEEEEEECCHHHHHHHHHHH----H--------HHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHH
T ss_pred             hhcCCCccceEEEEecCHHHHHHHHHHh----c--------ccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHH
Confidence            9999999  599998 788876543200    0        01135677888888888875321        23578899


Q ss_pred             HHHHHHHHHHHHHHHccCCceecCCCCCC---------CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCC---CCe
Q 043610          334 KMNRKKAELLYNVIDGSNGFYKCPVEKSV---------RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRS---VGG  401 (430)
Q Consensus       334 ~~~~~l~~~l~~~l~~~~G~~~~~~~~~~---------rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~---~g~  401 (430)
                      ++++++++++.+.|++..|+++.......         .....+.+.+++.   ..+.+.|.++||.+.+|...   .++
T Consensus       285 ~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~---~~~~~~l~~~gV~v~pg~~fg~~~~~  361 (391)
T 3bwn_A          285 EMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE---TDLVSELRRHKVMSRAGERCGSDKKH  361 (391)
T ss_dssp             HHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS---CCHHHHHHHTTEECEEGGGGTCCTTE
T ss_pred             HHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH---HHHHHHHHHCCEEEccCCCCCCCCCE
Confidence            99999999999999974466654211110         1112345666531   24666778899998876422   468


Q ss_pred             eEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          402 MRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       402 iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +|||++.  ++++++++++.|+++++
T Consensus       362 iRis~~~--~~e~i~~~~~~L~~~~~  385 (391)
T 3bwn_A          362 VRVSMLS--REDVFNVFLERLANMKL  385 (391)
T ss_dssp             EEEESCS--CHHHHHHHHHHHHSCC-
T ss_pred             EEEEecC--CHHHHHHHHHHHHHHHH
Confidence            9999984  89999999999998754

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.87  E-value=1.1e-20  Score=195.08  Aligned_cols=317  Identities=15%  Similarity=0.106  Sum_probs=204.8

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-C--CCCcEEEEEeCcHHHHHHHHHhhcCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-I--PQEYSVLFLQGGATTQFAAVPLNLCTP  157 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-~--~~~~~vv~~~~gaT~a~~~~~~sl~~~  157 (430)
                      .|..+++++.+.+.+..+.+...|....   ...++.+.+.+.+++..| .  +++ +|+++ +|+++++..++..++.+
T Consensus       102 ~P~~~~~~~~~~l~~~~~~~~~~Y~~~~---G~~~lr~~ia~~~~~~~gG~~~~~~-~i~~t-~G~~~ai~~~~~~l~~~  176 (498)
T 3ihj_A          102 FPEDAKKRARRILQACGGNSLGSYSASQ---GVNCIREDVAAYITRRDGGVPADPD-NIYLT-TGASDGISTILKILVSG  176 (498)
T ss_dssp             SCHHHHHHHHHHHHHC----------CC---SCHHHHHHHHHHHHHHTTTCCCCGG-GEEEE-SSHHHHHHHHHHHHCCC
T ss_pred             CCHHHHHHHHHHHHhccCCCCCCCCCCC---CHHHHHHHHHHHHHHhcCCCCCCcc-cEEEc-CCHHHHHHHHHHHHcCC
Confidence            5777888877777653321111221211   222334455556666654 4  344 67765 78999999999999888


Q ss_pred             CC----cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC-----CccEEEEeecCCCccccC
Q 043610          158 ND----PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP-----DAKYLHICANETIHGVEF  225 (430)
Q Consensus       158 gd----~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~-----~~~lv~i~~~~t~tG~~~  225 (430)
                      ||    +|++..+.+.++  ...++..| +++.++..++.+|  .+|+++|+  +++     ++++|++++++||||.++
T Consensus       177 gd~~~d~Vlv~~p~y~~~--~~~~~~~g~~~v~~~~~~~~~~--~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~  252 (498)
T 3ihj_A          177 GGKSRTGVMIPIPQYPLY--SAVISELDAIQVNYYLDEENCW--ALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQ  252 (498)
T ss_dssp             CGGGSEEEEEEESCCTHH--HHHHHHTTCEEEEEECBGGGTT--BCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCC
T ss_pred             CCCCCCEEEEeCCCchhH--HHHHHHcCCEEEEeeccccccC--CCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcC
Confidence            75    888877776654  33455667 7777777643334  37888887  444     589999999999999999


Q ss_pred             C--C---Cccc-cCCCcEEEEeccCcCCCC-----cccccc------------cc-EEEeCCCccc-cCCc--cEEEEE-
Q 043610          226 K--E---YPSA-KNSTGILVADMSSNFCSK-----PVDVTR------------FG-VIYAGAQKNV-GPSG--VTIVIV-  277 (430)
Q Consensus       226 p--e---i~~~-~~~g~~lvvD~a~s~G~~-----~idl~~------------~d-~~~~s~~K~~-gp~G--~g~l~v-  277 (430)
                      +  +   |.++ +++|+++++|+++.....     ...+..            .. +++.|++|.+ |++|  +|++++ 
T Consensus       253 s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~  332 (498)
T 3ihj_A          253 SRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVI  332 (498)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEe
Confidence            9  3   5554 589999999999875322     222222            11 5678999999 7778  788874 


Q ss_pred             --cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH-----------HHHHhcCHHHHHHHHHHHHHHHH
Q 043610          278 --RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE-----------YLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       278 --~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~-----------~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                        ++++++.+...          ..   ...+++..++.++..+++           ++.   ..+.+.+++++++++++
T Consensus       333 ~~~~~l~~~l~~~----------~~---~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~---~~~~~~~~l~~~~~~l~  396 (498)
T 3ihj_A          333 NLHPEIKGQLVKL----------LS---VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSR---EKESVLGNLAKKAKLTE  396 (498)
T ss_dssp             SCCHHHHHHHHHH----------HH---HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH----------Hh---ccCCCCHHHHHHHHHHhcCCccCcccHHHHHH---HHHHHHHHHHHHHHHHH
Confidence              77777654210          00   123567778877777663           222   24678889999999999


Q ss_pred             HHHHccCCceecCCCCCCCccceEEEEcCCC----------chhH-HH-H-HHHHHcCCeecCCCCC-----CCeeEEee
Q 043610          345 NVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS----------DLEA-EF-V-KEAAKEKMVQLKGHRS-----VGGMRASI  406 (430)
Q Consensus       345 ~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~----------~~~~-~~-~-~~L~~~Gi~~~~g~~~-----~g~iRis~  406 (430)
                      +.|.+..|+.+.+  +  .+...+.+.+...          +.+. ++ + +.|.++||.+.+|...     .+++|+++
T Consensus       397 ~~L~~~~g~~~~~--p--~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~  472 (498)
T 3ihj_A          397 DLFNQVPGIHCNP--L--QGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTI  472 (498)
T ss_dssp             HHHHTSTTEECCC--C--CBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEEC
T ss_pred             HHHhcCCCcEecC--C--CeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEe
Confidence            9999755887653  1  2223222233210          1122 32 4 4567789998775421     23799999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHh
Q 043610          407 YNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       407 ~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .  .++++++++++.|++++++
T Consensus       473 ~--~~~e~l~~~i~~L~~~~~~  492 (498)
T 3ihj_A          473 L--PPVEKLKTVLQKVKDFHIN  492 (498)
T ss_dssp             C--SCHHHHHHHHHHHHHHHHH
T ss_pred             C--CCHHHHHHHHHHHHHHHHH
Confidence            5  6899999999999888764

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.87  E-value=1.9e-21  Score=194.89  Aligned_cols=277  Identities=14%  Similarity=0.054  Sum_probs=182.9

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      .++++|+.+++++|.+   ++++++ |||+|++.++. ++++||+|++....+.+.. ++ ..++..| +++.++..   
T Consensus        56 ~~~~lr~~la~~~g~~---~~i~~~-sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~---  127 (393)
T 1n8p_A           56 NRENLERAVAALENAQ---YGLAFS-SGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL---  127 (393)
T ss_dssp             HHHHHHHHHHHHTTCS---EEEEES-CHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH---
T ss_pred             hHHHHHHHHHHHhCCC---cEEEEC-ChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC---
Confidence            4678999999999986   345554 56999999999 8899999998776554331 22 1234557 77666541   


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCC----CcEEEEeccCcCCCCcccccc--ccEEEe
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNS----TGILVADMSSNFCSKPVDVTR--FGVIYA  261 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~----g~~lvvD~a~s~G~~~idl~~--~d~~~~  261 (430)
                            | ++++  +++++++|++++++|++|.++|  +|.++ +++    |+++++|++|+.+... ++.+  .|+++.
T Consensus       128 ------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~~~di~~~  199 (393)
T 1n8p_A          128 ------L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNFGADIVVH  199 (393)
T ss_dssp             ------H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGGTCSEEEE
T ss_pred             ------h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHcCCeEEEE
Confidence                  5 6666  6789999999999999999999  78886 677    9999999999877542 3333  479999


Q ss_pred             CCCccccCCc--c-EEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610          262 GAQKNVGPSG--V-TIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR  337 (430)
Q Consensus       262 s~~K~~gp~G--~-g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~  337 (430)
                      |+||++|++|  + |+++++ +++++.+..       +.  ...+   ++.+....+++..+++.      +....++..
T Consensus       200 S~sK~~g~~G~rigG~~~~~~~~~~~~l~~-------~~--~~~g---~~~~~~~~~~~~~~l~~------~~~~~~~~~  261 (393)
T 1n8p_A          200 SATKYINGHSDVVLGVLATNNKPLYERLQF-------LQ--NAIG---AIPSPFDAWLTHRGLKT------LHLRVRQAA  261 (393)
T ss_dssp             ETTTTTTCSSCCCCEEEEESCHHHHHHHHH-------HH--HHHC---CCCCHHHHHHHHHHHTT------HHHHHHHHH
T ss_pred             ECcccccCCCCceeEEEEeCCHHHHHHHHH-------HH--HhcC---CCCCHHHHHHHHhccch------HHHHHHHHH
Confidence            9999999888  7 999885 677665421       00  0011   23444444444444442      344555566


Q ss_pred             HHHHHHHHHHHccCC-cee--cC-CC-CCC--------C--c-cceEEEEcCCCchhH-HHHHHHHHcCCeecCC-----
Q 043610          338 KKAELLYNVIDGSNG-FYK--CP-VE-KSV--------R--S-FMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKG-----  395 (430)
Q Consensus       338 ~l~~~l~~~l~~~~G-~~~--~~-~~-~~~--------r--s-~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g-----  395 (430)
                      +.+..+.+.|.+... +.-  .+ .. .+.        +  . +.+++|.+++...+. .++..|...++.+..|     
T Consensus       262 ~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~G~~~s~  341 (393)
T 1n8p_A          262 LSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESL  341 (393)
T ss_dssp             HHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCCSSCE
T ss_pred             HHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCCCCCcce
Confidence            667777778876332 321  11 10 010        1  2 467889997521122 4555554333222111     


Q ss_pred             --------C------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          396 --------H------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       396 --------~------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                              +            ...+.||+|++.++++++|+.+.++|+++.
T Consensus       342 ~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~~  392 (393)
T 1n8p_A          342 LEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQAT  392 (393)
T ss_dssp             EECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred             eeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence                    1            013579999999999999999999998764

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.87  E-value=1.7e-20  Score=186.99  Aligned_cols=278  Identities=13%  Similarity=0.051  Sum_probs=190.0

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHH-HHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAF-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+++++.+++++|.+ + . ++++ +|+++++.++..++++||+|++....+.+. ... ..++..| ++..++.    
T Consensus        53 ~~~~l~~~la~~~~~~-~-~-i~~~-sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----  124 (386)
T 1cs1_A           53 TRDVVQRALAELEGGA-G-A-VLTN-TGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ----  124 (386)
T ss_dssp             HHHHHHHHHHHHHTCS-E-E-EEES-SHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT----
T ss_pred             cHHHHHHHHHHHhCCC-c-E-EEeC-CHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCC----
Confidence            3568889999999987 2 4 4454 569999999999889999999877666552 222 2234556 5554442    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKN  266 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~  266 (430)
                           .|+++++  +++++++|++++++|+||.+.|  +|.++ +++|+++++|++|+.+.....++ ..|+++.|+||+
T Consensus       125 -----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~  199 (386)
T 1cs1_A          125 -----GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKY  199 (386)
T ss_dssp             -----TCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTT
T ss_pred             -----CCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCceEEEEcCccc
Confidence                 2567776  6788999999999999999999  78886 68999999999999887643332 237999999999


Q ss_pred             cc-CCcc--EEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VG-PSGV--TIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~g-p~G~--g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      +| |.|.  |++++++ ++++.+.+   ....         ..++.+....+++..+++.      ++...++..+.++.
T Consensus       200 ~~~~~~~~~G~~~~~~~~l~~~l~~---~~~~---------~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~  261 (386)
T 1cs1_A          200 LNGHSDVVAGVVIAKDPDVVTELAW---WANN---------IGVTGGAFDSYLLLRGLRT------LVPRMELAQRNAQA  261 (386)
T ss_dssp             TTCSSCCCCEEEEESSHHHHHHHHH---HHHH---------HTCBCCHHHHHHHHHHHTT------HHHHHHHHHHHHHH
T ss_pred             ccCCCCceeEEEEeCcHHHHHHHHH---HHHh---------cCCCCCHHHHHHHHhcccH------HHHHHHHHHHHHHH
Confidence            96 6553  9999986 67665422   0000         1134566655555555543      34455666667777


Q ss_pred             HHHHHHccCCceec--CC-CC----------CCCccceEEEEcCCCchhHHHHHHHHHcCCeecC---C-----------
Q 043610          343 LYNVIDGSNGFYKC--PV-EK----------SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---G-----------  395 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~~-~~----------~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g-----------  395 (430)
                      +.+.|.+..++...  +. ..          ......++.|.+++ . ..++.+.|.++||.+..   |           
T Consensus       262 l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~  339 (386)
T 1cs1_A          262 IVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-D-EQTLRRFLGGLSLFTLAESLGGVESLISHAAT  339 (386)
T ss_dssp             HHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-C-HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGG
T ss_pred             HHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-C-HHHHHHHHHhCCcceEcccCCCcceeeecccc
Confidence            77777763333211  10 00          01123567788874 2 33677788888998752   3           


Q ss_pred             -C-------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          396 -H-------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       396 -~-------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       .             ...+.+|||++..+++++++++.++|+++.
T Consensus       340 ~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~~  384 (386)
T 1cs1_A          340 MTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAAN  384 (386)
T ss_dssp             TTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHT
T ss_pred             cccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence             0             113689999999999999999999998864

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.86  E-value=4.5e-21  Score=191.76  Aligned_cols=313  Identities=13%  Similarity=0.037  Sum_probs=191.2

Q ss_pred             ecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC------CCcEEEEE-eCcHHHH
Q 043610           74 FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP------QEYSVLFL-QGGATTQ  146 (430)
Q Consensus        74 ~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~------~~~~vv~~-~~gaT~a  146 (430)
                      +..++.++.+.+.+++.+.+.+....++.   .. .  .    ..++|+.++++++..      ++ +|+++ ++|++++
T Consensus        40 d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~---~~-~--g----~~~lr~~ia~~~~~~~~~~~~~~-~i~~v~t~G~~~a  108 (401)
T 7aat_A           40 DDNGKPYVLNCVRKAEAMIAAKKMDKEYL---PI-A--G----LADFTRASAELALGENSEAFKSG-RYVTVQGISGTGS  108 (401)
T ss_dssp             CTTSCCCCCHHHHHHHHHHHHTTCCCCCC---CT-T--C----CHHHHHHHHHHHHCTTCHHHHTT-CEEEEEEEHHHHH
T ss_pred             CCCCCEechHHHHHHHHHhcccccccCCC---CC-C--C----CHHHHHHHHHHhcCCCccccccC-ceEEEecCcchHH
Confidence            33445566678898888765421111111   10 1  1    235566666666532      44 67652 5789999


Q ss_pred             HHHHHhhc---CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccc----cc-cCCCccEEEEeec
Q 043610          147 FAAVPLNL---CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDA----LE-QNPDAKYLHICAN  217 (430)
Q Consensus       147 ~~~~~~sl---~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~----l~-i~~~~~lv~i~~~  217 (430)
                      ++.++..+   ++|||+|++..+.+.++.  ..++..| +++.++...+..+  .+|+++    ++ +.+++++|+++++
T Consensus       109 l~~~~~~l~~~~~~gd~Vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~~~~v~i~~p  184 (401)
T 7aat_A          109 LRVGANFLQRFFKFSRDVYLPKPSWGNHT--PIFRDAGLQLQAYRYYDPKTC--SLDFTGAMEDISKIPEKSIILLHACA  184 (401)
T ss_dssp             HHHHHHHHHHHCTTCCEEEEEESCCTTHH--HHHHHTTCEEEEEECEETTTT--EECHHHHHHHHTTSCTTCEEEEESSS
T ss_pred             HHHHHHHHHHhccCCCEEEEcCCCchhHH--HHHHHcCCeeEeeeeeccccC--ccCHHHHHHHHHhCCCCcEEEEeCCC
Confidence            99877654   489999999888776653  3456677 7777776432112  467774    33 4578999999999


Q ss_pred             CCCccccCC--C---Cccc-cCCCcEEEEeccCc-CCCCcc--c---cc------cccEEEeCCCccccCCc--cEEEEE
Q 043610          218 ETIHGVEFK--E---YPSA-KNSTGILVADMSSN-FCSKPV--D---VT------RFGVIYAGAQKNVGPSG--VTIVIV  277 (430)
Q Consensus       218 ~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~~i--d---l~------~~d~~~~s~~K~~gp~G--~g~l~v  277 (430)
                      +||||.+++  +   |.++ +++|+++++|+++. ++..+.  +   +.      ...+++.|++|.+|++|  +|++++
T Consensus       185 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~  264 (401)
T 7aat_A          185 HNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTV  264 (401)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEE
Confidence            999999998  3   4444 58999999999865 333221  1   11      11378899999999889  899887


Q ss_pred             ---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          278 ---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY--LLE--LGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       278 ---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~--l~~--~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                         +++..+.+....   ...   ..  .....++...+.++..+++.  +..  ...++..++++++++++++++|.+ 
T Consensus       265 ~~~~~~~~~~~~~~~---~~~---~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-  335 (401)
T 7aat_A          265 ICRDAEEAKRVESQL---KIL---IR--PMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKK-  335 (401)
T ss_dssp             ECSSHHHHHHHHHHH---HHH---HH--HHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             EeCCHHHHHHHHHHH---HHH---HH--hccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence               444322210000   000   00  01123344455555444421  100  113677888999999999999987 


Q ss_pred             CC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          351 NG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       351 ~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .|    +...+  +  .. +.+.+  .+  .+.+++.+| .++||.+.+      ++|||++..++++ |++++++|+++
T Consensus       336 ~~~~~~~~~~~--~--~~-~~~~~--~~--~~~~~~~~ll~~~gi~v~~------~~Ris~~~~~~~~-i~~~~~~l~~~  399 (401)
T 7aat_A          336 EGSSHNWQHIT--D--QI-GMFCF--TG--LKPEQVERLTKEFSIYMTK------DGRISVAGVASSN-VGYLAHAIHQV  399 (401)
T ss_dssp             TTCCSCCHHHH--H--CC-SSEEE--CC--CCHHHHHHHHHHHCEECCT------TCEEEGGGCCTTT-HHHHHHHHHHH
T ss_pred             cCCCCCCceec--C--Cc-ceEEe--cC--CCHHHHHHHHHhCCEeccC------CCeEEeccCChhh-HHHHHHHHHHH
Confidence            44    33321  1  11 12222  22  234444554 678998864      3899998665555 99999999987


Q ss_pred             H
Q 043610          426 Q  426 (430)
Q Consensus       426 ~  426 (430)
                      +
T Consensus       400 ~  400 (401)
T 7aat_A          400 T  400 (401)
T ss_dssp             H
T ss_pred             h
Confidence            5

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.86  E-value=3.5e-21  Score=197.00  Aligned_cols=278  Identities=12%  Similarity=0.055  Sum_probs=178.7

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHH--HHHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA--FKEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~--~~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+++++.+++++|.+   +++++ +||++|+..++. ++++||+|++..+.|.+...  ...++..| +++.++.    
T Consensus       134 ~~~~l~~~la~~~g~~---~~i~~-~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~----  204 (464)
T 1ibj_A          134 TRDALESLLAKLDKAD---RAFCF-TSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT----  204 (464)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT----
T ss_pred             HHHHHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCC----
Confidence            4678999999999975   56665 677899988775 77999999987776655421  11234456 6555543    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCCc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQK  265 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~K  265 (430)
                           .|+++++  +++++++|++++++|+||.+.|  +|.++ +++|+++++|++|+.|..  ++++ ..|+++.|+||
T Consensus       205 -----~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~-~~div~~S~sK  278 (464)
T 1ibj_A          205 -----TKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLEL-GADIVMHSATK  278 (464)
T ss_dssp             -----TSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGT-TCSEEEEETTT
T ss_pred             -----CCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhhc-CCEEEEECCcc
Confidence                 2567776  7889999999999999999999  78886 689999999999988765  4543 34899999999


Q ss_pred             ccc-CCcc--EEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          266 NVG-PSGV--TIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       266 ~~g-p~G~--g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      +++ |.|+  |++++++ ++++.+..    +.      .  ...++.+....+++..+|+.+..  .++...+....+.+
T Consensus       279 ~~~g~~Gl~~G~l~~~~~~l~~~l~~----~~------~--~~g~~~~~~~~~a~~~al~~~~~--r~~~~~~~~~~l~~  344 (464)
T 1ibj_A          279 FIAGHSDVMAGVLAVKGEKLAKEVYF----LQ------N--SEGSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAM  344 (464)
T ss_dssp             TTTCSSCCCCEEEEECSHHHHHHHHH----HH------H--HTTCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCCCcEEEEEEChHHHHHHHHH----HH------H--hcCCCCCHHHHHHHHhchhhHHH--HHHHHHHHHHHHHH
Confidence            995 8886  9999985 66655321    00      0  01134455566665556542211  01222222222233


Q ss_pred             HHH----------HHHHccCCceecCCCCCCCccceEEEEcCCCchh-H-HHHHHHHHcCCeecCCC-------------
Q 043610          342 LLY----------NVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLE-A-EFVKEAAKEKMVQLKGH-------------  396 (430)
Q Consensus       342 ~l~----------~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~-~-~~~~~L~~~Gi~~~~g~-------------  396 (430)
                      ++.          ++|.+..|+++..... .....++.|.+++  .+ . +|++.|...||.+..|.             
T Consensus       345 ~l~~~~~v~~~~~~~L~~~p~~~~~~~~~-~g~g~~~~~~l~~--~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~  421 (464)
T 1ibj_A          345 YLSSHPRVKKVYYAGLPDHPGHHLHFSQA-KGAGSVFSFITGS--VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH  421 (464)
T ss_dssp             HHHTCTTCCEEECTTSTTSTTHHHHTTTC-SCCCSEEEEECSC--HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTT
T ss_pred             HHHhCCCceEEECCCCCCCcchHHHhccC-CCCceEEEEEECC--HHHHHHHHHhcCcceEeecCCCCceeeeccccccc
Confidence            332          2222222343332111 1123467888853  22 2 47777766666654442             


Q ss_pred             ------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          397 ------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       397 ------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                                  ...+.+|+|++.    ||++++++.|++++++.
T Consensus       422 ~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~~~  462 (464)
T 1ibj_A          422 ASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKTF  462 (464)
T ss_dssp             CSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHSC
T ss_pred             ccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHhhc
Confidence                        013579999985    89999999999988754

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.86  E-value=7.3e-21  Score=193.41  Aligned_cols=279  Identities=12%  Similarity=0.023  Sum_probs=186.0

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHH-HHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFK-EAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~-~a~~~g-~~~~v~~~~~  191 (430)
                      ..++++++.+++++|.+   +.+++ ++|+++++.++.+++++||+|++....|.+. .++. .+++.| +++.++.   
T Consensus       114 ~~~~~l~~~lA~l~g~~---~~v~~-~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~---  186 (445)
T 1qgn_A          114 PTTVVLEEKISALEGAE---STLLM-ASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP---  186 (445)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS---
T ss_pred             hHHHHHHHHHHHHhCCC---cEEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC---
Confidence            45678999999999986   34555 4567999999999999999999877665543 2222 244567 6655543   


Q ss_pred             CcCCCCCCccccc--cCCCc-cEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDA-KYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~-~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~  264 (430)
                            .|+++++  +++++ ++|++++++|++|.+.|  +|.++ +++|+++++|++|+.+.....++ ..|+++.|+|
T Consensus       187 ------~d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~s  260 (445)
T 1qgn_A          187 ------ADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSAT  260 (445)
T ss_dssp             ------SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTT
T ss_pred             ------CCHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCc
Confidence                  2567776  67888 99999999999999999  78886 68999999999998765422221 2479999999


Q ss_pred             ccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          265 KNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       265 K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      |++|+.|   +|+++.++++++.+..       +.   .  ...++++....+.+..+++.      +....+++.+.+.
T Consensus       261 K~~gg~gd~~~G~l~~~~~l~~~l~~-------~~---~--~~g~~~~~~~a~~~~~~l~~------l~~r~~~~~~~a~  322 (445)
T 1qgn_A          261 KFLGGHNDVLAGCISGPLKLVSEIRN-------LH---H--ILGGALNPNAAYLIIRGMKT------LHLRVQQQNSTAL  322 (445)
T ss_dssp             TTTTCSSSCCCEEEEECHHHHHHHHH-------HH---H--HHCCCCCHHHHHHHHHHGGG------HHHHHHHHHHHHH
T ss_pred             ccccccccceEEEEEECHHHHHHHHH-------HH---H--HhCCCCCHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence            9998777   8999999988775421       00   0  01123555444444444443      3344555666678


Q ss_pred             HHHHHHHccCCc-eecCC-CCC-----------CCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCC-----------
Q 043610          342 LLYNVIDGSNGF-YKCPV-EKS-----------VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGH-----------  396 (430)
Q Consensus       342 ~l~~~l~~~~G~-~~~~~-~~~-----------~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~-----------  396 (430)
                      ++.+.|.+.+++ .+... .+.           .....+++|.+++...+. +++..|+..++.+..|.           
T Consensus       323 ~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~  402 (445)
T 1qgn_A          323 RMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIVDQPAIM  402 (445)
T ss_dssp             HHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEEECHHHH
T ss_pred             HHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceeeeccccc
Confidence            888999875555 33211 111           013457889997521112 45555543233322221           


Q ss_pred             --------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          397 --------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       397 --------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                                    ...+.||+|++    .||++.+++.|++.+++
T Consensus       403 ~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~  444 (445)
T 1qgn_A          403 SYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS  444 (445)
T ss_dssp             HSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence                          11357999998    47899999999998764

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.86  E-value=3.6e-21  Score=193.32  Aligned_cols=308  Identities=11%  Similarity=-0.000  Sum_probs=199.7

Q ss_pred             CCCcHHHHHHHHH-HhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC------CCCcEEEE--EeCcHHHHHHH
Q 043610           79 ANLPEKVLLKAQS-ELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI------PQEYSVLF--LQGGATTQFAA  149 (430)
Q Consensus        79 ~~~~~~V~~a~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~------~~~~~vv~--~~~gaT~a~~~  149 (430)
                      .++++.|++++.+ .+..    +.    .+++++.  .-..++|+.++++++.      +++ +|++  + +|++++++.
T Consensus        46 ~~~~~~v~~a~~~~~~~~----~~----~~~y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~t-~g~~~a~~~  113 (412)
T 1yaa_A           46 PWVLPSVKAAEKLIHNDS----SY----NHEYLGI--TGLPSLTSNAAKIIFGTQSDALQED-RVISVQS-LSGTGALHI  113 (412)
T ss_dssp             BCCCHHHHHHHHHHHTCT----TC----CCCCCCT--TCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-EHHHHHHHH
T ss_pred             CCCcHHHHHHHHhhhcCc----cc----ccCCCCC--CCcHHHHHHHHHHHhcCCCCCCCcc-eEEEEec-cchHhHHHH
Confidence            4678999999988 7641    10    1111111  1133666777777632      344 6776  5 689999998


Q ss_pred             H--HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---CccEEEEeecCCCc
Q 043610          150 V--PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---DAKYLHICANETIH  221 (430)
Q Consensus       150 ~--~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---~~~lv~i~~~~t~t  221 (430)
                      +  +..++.+||+|++..+++.+..  ..++..| +++.++..++  .+..+|+++++  +++   .+.++++++++|||
T Consensus       114 ~~~~~~~~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPt  189 (412)
T 1yaa_A          114 SAKFFSKFFPDKLVYLSKPTWANHM--AIFENQGLKTATYPYWAN--ETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPT  189 (412)
T ss_dssp             HHHHHHHHCTTCCEEEEESCCTTHH--HHHHTTTCCEEEEECEET--TTTEECHHHHHHHHHHSCTTCEEEEECSSCTTT
T ss_pred             HHHHHHHhCCCCEEEEeCCCCccHH--HHHHHcCceEEEEeeecC--CCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence            7  3444579999999888877643  4566678 8877776211  12247888876  432   24555669999999


Q ss_pred             cccCC--C---Cccc-cCCCcEEEEeccCc-C--CC---C--cc-ccc---c---ccEEEeCCCccccCCc--cEEEE--
Q 043610          222 GVEFK--E---YPSA-KNSTGILVADMSSN-F--CS---K--PV-DVT---R---FGVIYAGAQKNVGPSG--VTIVI--  276 (430)
Q Consensus       222 G~~~p--e---i~~~-~~~g~~lvvD~a~s-~--G~---~--~i-dl~---~---~d~~~~s~~K~~gp~G--~g~l~--  276 (430)
                      |.+++  +   |.++ +++|+++++|++|+ +  +.   .  ++ ++.   .   .++++.|++|.+||+|  +|+++  
T Consensus       190 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~  269 (412)
T 1yaa_A          190 GLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLA  269 (412)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEE
Confidence            99998  3   4444 58999999999974 3  21   1  22 322   1   2377899999999989  69988  


Q ss_pred             E-----cHH----HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHH
Q 043610          277 V-----RKD----LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL----ELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       277 v-----~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~----~~~g~~~v~~~~~~l~~~l  343 (430)
                      .     +++    +++.+..       .   ..  ...+++|...+.++..+|+...    -..+++.++++++++++++
T Consensus       270 ~~~~~~~~~~~~~l~~~l~~-------~---~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  337 (412)
T 1yaa_A          270 LTKQAQNKTIKPAVTSQLAK-------I---IR--SEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHAL  337 (412)
T ss_dssp             CCSCTTHHHHHHHHHHHHHH-------H---HH--TTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCHHHHHHHHHHHHH-------H---Hh--hccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6     555    4443211       0   00  1224667788888888886431    0125788999999999999


Q ss_pred             HHHHHccC---CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610          344 YNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       344 ~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~  420 (430)
                      ++.|++..   ++++.+  +  ... .+.+ +. .. ...+...|.++||.+.+      ++|||++. .+++|++++++
T Consensus       338 ~~~L~~~~~~~~~~~~~--~--~~~-~~~~-~~-~~-~~~~~~~l~~~gi~v~~------~~Ris~~~-~~~~~i~~~~~  402 (412)
T 1yaa_A          338 RDHLVKLGTPGNWDHIV--N--QCG-MFSF-TG-LT-PQMVKRLEETHAVYLVA------SGRASIAG-LNQGNVEYVAK  402 (412)
T ss_dssp             HHHHHHHTCSSCCTHHH--H--CCS-SEEE-CC-CC-HHHHHHHHHHHCEECCT------TSEEEGGG-CCTTTHHHHHH
T ss_pred             HHHHHhhCCCCCeeeec--c--Cce-EEEe-eC-CC-HHHHHHHHHhCCEEecc------CcEEEEcc-CCHhHHHHHHH
Confidence            99998732   255432  1  122 2222 21 11 22454455678998865      48999984 58999999999


Q ss_pred             HHHHHHHhh
Q 043610          421 FMKDFQAKH  429 (430)
Q Consensus       421 ~L~~~~~~~  429 (430)
                      +|+++++..
T Consensus       403 ~l~~~~~~~  411 (412)
T 1yaa_A          403 AIDEVVRFY  411 (412)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhh
Confidence            999988753

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.77  E-value=1.6e-23  Score=209.24  Aligned_cols=324  Identities=10%  Similarity=0.023  Sum_probs=212.2

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CCCCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IPQEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~~~~~vv~~~~gaT~  145 (430)
                      .++.|+.|-  .+.++.+++++.+.+.+    +     ..++.....+..+++.+.+++.+|  .+++ +|++ ++|+++
T Consensus        32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~----~-----~~~y~~~~~~l~~~la~~l~~~~g~~~~~~-~v~~-~~g~~~  100 (392)
T 3b1d_A           32 QLLPAWIADMDFEVMPEVKQAIHDYAEQ----L-----VYGYTYASDELLQAVLDWEKSEHQYSFDKE-DIVF-VEGVVP  100 (392)
Confidence            556665554  35678899998887642    1     112222233333444444444556  4444 6666 478999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC-CCCCccccc--cC-CCccEEEEeecCCC
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT-KIPNFDALE--QN-PDAKYLHICANETI  220 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g-~~~d~~~l~--i~-~~~~lv~i~~~~t~  220 (430)
                      ++.+++..+.++||+|++..+.+.+..  ..++..| +++.++....  .+ ..+|+++++  +. +++++|++++++|+
T Consensus       101 a~~~~~~~~~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~--~g~~~~d~~~l~~~l~~~~~~~v~~~~~~np  176 (392)
T 3b1d_A          101 AISIAIQAFTKEGEAVLINSPVYPPFA--RSVRLNNRKLVSNSLKEE--NGLFQIDFEQLENDIVENDVKLYLLCNPHNP  176 (392)
Confidence            999999998889999998777666542  3445566 7766665321  11 236778887  55 68899999999999


Q ss_pred             ccccCC--C---Cccc-cCCCcEEEEeccCcCCCC----cccc---cc--c--cEEEeCCCccccCCc--cEEEEEcHH-
Q 043610          221 HGVEFK--E---YPSA-KNSTGILVADMSSNFCSK----PVDV---TR--F--GVIYAGAQKNVGPSG--VTIVIVRKD-  280 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~idl---~~--~--d~~~~s~~K~~gp~G--~g~l~v~~~-  280 (430)
                      ||.+++  +   |.++ +++|+++++|++++....    ...+   ..  .  .+++.|++|++|.+|  +|+++++++ 
T Consensus       177 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  256 (392)
T 3b1d_A          177 GGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPT  256 (392)
Confidence            999988  3   4444 589999999999875321    1122   11  2  378899999998767  788888654 


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-cCCceecCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-SNGFYKCPVE  359 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-~~G~~~~~~~  359 (430)
                      +++.+.....           ....++++...++++..+|+..  ...++.++++++++++++.+.|++ ..|+.+..  
T Consensus       257 ~~~~~~~~~~-----------~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--  321 (392)
T 3b1d_A          257 LCAQFKHQQL-----------VNNHHEVSSLGYIATETAYRYG--KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMK--  321 (392)
Confidence            6665432110           0112356677777777777642  235788889999999999999986 34665542  


Q ss_pred             CCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +  .+...+.+.++..+.+. ++.+.|. ++||.+.+|..    ..+++||++..  ++++++++++.|+++++
T Consensus       322 ~--~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~--~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          322 P--QGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA--PKSLVEEICKRIVCCLP  391 (392)
Confidence            1  22233334555311233 6888885 78999877642    13479999875  68999999999998765

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.86  E-value=2.9e-20  Score=187.36  Aligned_cols=323  Identities=13%  Similarity=0.090  Sum_probs=207.4

Q ss_pred             CceeecCCCCC-----CcHHHHHHHH--HHhhhccCCCCcccccCCC-cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           70 RVFNFAAGPAN-----LPEKVLLKAQ--SELYNWRGSGMSVMEMSHR-GKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        70 ~~~l~~~gp~~-----~~~~V~~a~~--~~~~~~~~~g~s~~~~~~~-~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++|+.|-..     .|+.+++++.  +.+.    .+..   ..++ ++.  .-..++|+.++++++++++ +|++ ++
T Consensus        26 ~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~----~~~~---~~~Yp~~~--~g~~~lr~~ia~~~~~~~~-~i~~-t~   94 (423)
T 3ez1_A           26 LNLNMQRGQPADADFDLSNGLLTVLGAEDVRM----DGLD---LRNYPGGV--AGLPSARALFAGYLDVKAE-NVLV-WN   94 (423)
T ss_dssp             CCEESCCCCCCHHHHHTTGGGGGSCCGGGCEE----TTEE---TTSSCSCT--TCCHHHHHHHHHHTTSCGG-GEEE-CS
T ss_pred             ceEecCCCCCChHhCCCcHHHHHHHhhhHHhh----cchh---hhCCCCCC--CChHHHHHHHHHHhCCChh-hEEE-eC
Confidence            46777776533     5556777775  3222    1110   1122 111  1134788999999999876 7776 57


Q ss_pred             cHHHHHH--HHHhhcCC--C---------CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c
Q 043610          142 GATTQFA--AVPLNLCT--P---------NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q  205 (430)
Q Consensus       142 gaT~a~~--~~~~sl~~--~---------gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i  205 (430)
                      |++++++  .++..++.  +         ||+|++..+++.+..  ..++..| +++.++...   .+  +|+++++  +
T Consensus        95 G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~---~g--~d~~~l~~~l  167 (423)
T 3ez1_A           95 NSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHF--LLLQTLGFELLTVDMQS---DG--PDVDAVERLA  167 (423)
T ss_dssp             SCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHH--HHHHHHTCEEEEEEEET---TE--ECHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHH--HHHHHcCCEEEeccCCC---CC--CCHHHHHHHH
Confidence            8999997  78888766  7         589998887776643  3456677 777777643   23  7888887  5


Q ss_pred             --CCCccEEEE-eecCCCccccCC-----CCccc--cCCCcEEEEeccCcC---CC----Ccccc---------ccccEE
Q 043610          206 --NPDAKYLHI-CANETIHGVEFK-----EYPSA--KNSTGILVADMSSNF---CS----KPVDV---------TRFGVI  259 (430)
Q Consensus       206 --~~~~~lv~i-~~~~t~tG~~~p-----ei~~~--~~~g~~lvvD~a~s~---G~----~~idl---------~~~d~~  259 (430)
                        ++++++|++ ++++||||.+++     +|.++  +++|+++++|++|+.   ..    .+.++         .+.+++
T Consensus       168 ~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  247 (423)
T 3ez1_A          168 GTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFV  247 (423)
T ss_dssp             HSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEE
T ss_pred             hhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEE
Confidence              688999875 488999999999     35553  589999999999873   21    11121         123488


Q ss_pred             EeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH-HH-HhcCHHHHHHHH
Q 043610          260 YAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY-LL-ELGGLNEVEKMN  336 (430)
Q Consensus       260 ~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~-l~-~~~g~~~v~~~~  336 (430)
                      +.|++|+++ ..++|+++.++++++.+....          .  ....+++...+.++..+|+. .. -...++...+++
T Consensus       248 ~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  315 (423)
T 3ez1_A          248 FASTSKITFAGAGLGFVASSEDNIRWLSKYL----------G--AQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAII  315 (423)
T ss_dssp             EEESTTTSCSSSSCEEEEECHHHHHHHHHHH----------H--HSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHH
T ss_pred             EeCchhhccCCcceEEEEeCHHHHHHHHHHH----------h--hhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence            999999853 345899999998877642200          0  01134566667776666654 10 001234455555


Q ss_pred             HHHHHHHHHHHHcc---CC--ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC-CCC-------CCCeeE
Q 043610          337 RKKAELLYNVIDGS---NG--FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK-GHR-------SVGGMR  403 (430)
Q Consensus       337 ~~l~~~l~~~l~~~---~G--~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~~-------~~g~iR  403 (430)
                      +++++.+.+.|.+.   .|  +.+..  +  .....+.+.+++. ...++.+.|.++||.+.+ |..       ..+++|
T Consensus       316 ~~~~~~l~~~l~~~l~~~~~~~~~~~--p--~~g~~~~~~~~~~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iR  390 (423)
T 3ez1_A          316 APKFRAVDEVLRAELGEGGEYATWTL--P--KGGYFISLDTAEP-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLR  390 (423)
T ss_dssp             HHHHHHHHHHHHHHHTTTTSSEEECC--C--SBSSCEEEEESSS-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEE
T ss_pred             HHHHHHHHHHHHHhcCcCCCceEEeC--C--CccEEEEEECCCC-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEE
Confidence            55555555555431   33  54432  2  1223456677652 233688888999999887 421       246899


Q ss_pred             EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          404 ASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       404 is~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ||+... ++++++++++.|++++++
T Consensus       391 is~~~~-~~~~i~~~~~~l~~~l~~  414 (423)
T 3ez1_A          391 LAPTRP-PVEEVRTAMQVVAACIRL  414 (423)
T ss_dssp             ECCSSS-CHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCC-CHHHHHHHHHHHHHHHHH
Confidence            999755 999999999999988764

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.86  E-value=1.2e-20  Score=189.44  Aligned_cols=320  Identities=11%  Similarity=-0.002  Sum_probs=209.2

Q ss_pred             CCceeecCCC-------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-CC-----CCCcE
Q 043610           69 DRVFNFAAGP-------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-NI-----PQEYS  135 (430)
Q Consensus        69 ~~~~l~~~gp-------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-g~-----~~~~~  135 (430)
                      +.+++|+.|-       .++++.|.+++.+.+.+.   +.    .+.+++.  .-..++|+.+++++ +.     +++ +
T Consensus        30 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~---~~----~~~y~~~--~g~~~lr~~la~~~~~~~~~~~~~~-~   99 (412)
T 1ajs_A           30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNS---SL----NHEYLPI--LGLAEFRTCASRLALGDDSPALQEK-R   99 (412)
T ss_dssp             TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCT---TC----CCCCCCT--TCCHHHHHHHHHHHHCTTCHHHHTT-C
T ss_pred             CCceeeccceecCCCCCccccHHHHHHHHHhhhCh---hh----ccCCCCC--CCCHHHHHHHHHHHhcCCCCccCCC-c
Confidence            4456666654       356789999988776221   00    1111111  11346778888887 43     444 6


Q ss_pred             EEE--EeCcHHHHHHHHH--hhcCCCC-----CcEEEEeCChhHHHHHHHHHHhC-C-ceEEecCCCCcCCCCCCccccc
Q 043610          136 VLF--LQGGATTQFAAVP--LNLCTPN-----DPVDYIVTGSWGDKAFKEAQKFC-N-PQVIWSGKAEKYTKIPNFDALE  204 (430)
Q Consensus       136 vv~--~~~gaT~a~~~~~--~sl~~~g-----d~vl~~~~g~~~~~~~~~a~~~g-~-~~~v~~~~~~~~g~~~d~~~l~  204 (430)
                      |++  + +|+++|++.++  ..++.+|     |+|++..+++.++.  ..++..| + ++.++...+  .+..+|+++++
T Consensus       100 v~~~~t-~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~--~~~~~d~~~l~  174 (412)
T 1ajs_A          100 VGGVQS-LGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHN--GVFTTAGFKDIRSYRYWDT--EKRGLDLQGFL  174 (412)
T ss_dssp             EEEEEE-EHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHH--HHHHHTTCSCEEEEECEET--TTTEECHHHHH
T ss_pred             EEEEEC-CCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHH--HHHHHcCCceeEEEeeecC--CCCccCHHHHH
Confidence            776  5 78999999885  3455789     99999888877643  4566677 7 877876321  12246788776


Q ss_pred             --cC---CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCc-CCCC-------ccc-ccc-cc--EEEe
Q 043610          205 --QN---PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSN-FCSK-------PVD-VTR-FG--VIYA  261 (430)
Q Consensus       205 --i~---~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~-------~id-l~~-~d--~~~~  261 (430)
                        +.   ++++++++++++|+||.+++  +   |.++ +++|+++++|+++. ++..       ++. +.. .|  +++.
T Consensus       175 ~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  254 (412)
T 1ajs_A          175 SDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQ  254 (412)
T ss_dssp             HHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEE
T ss_pred             HHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEE
Confidence              43   47888889999999999998  3   4554 58899999999954 4332       122 221 23  7899


Q ss_pred             CCCccccCCc--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH----HhcCHHHH
Q 043610          262 GAQKNVGPSG--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL----ELGGLNEV  332 (430)
Q Consensus       262 s~~K~~gp~G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~----~~~g~~~v  332 (430)
                      |++|.+|++|  +|++++   ++++++.+...   ...+     .....+++|...++++..+|+...    -...++.+
T Consensus       255 s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  326 (412)
T 1ajs_A          255 SFSKNFGLYNERVGNLTVVAKEPDSILRVLSQ---MQKI-----VRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTM  326 (412)
T ss_dssp             ECTTTSCCGGGCEEEEEEECSSHHHHHHHHHH---HHHH-----HHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             ecccccCCCCcceEEEEEecCCHHHHHHHHHH---HHHH-----HhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence            9999999999  799999   77754331100   0000     011224567778888888887431    01256889


Q ss_pred             HHHHHHHHHHHHHHHHccCC----ceecCCCCCCCccceEEEEcCCCchhHH-HHHHHHHcCCeecCCCCCCCeeEEeec
Q 043610          333 EKMNRKKAELLYNVIDGSNG----FYKCPVEKSVRSFMNVPFTLEKSDLEAE-FVKEAAKEKMVQLKGHRSVGGMRASIY  407 (430)
Q Consensus       333 ~~~~~~l~~~l~~~l~~~~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~-~~~~L~~~Gi~~~~g~~~~g~iRis~~  407 (430)
                      .++++++++++++.|.+ .|    +.+..  +  .. +.+.+ + +  .+.+ +...|.++||.+.++      +|||++
T Consensus       327 ~~~~~~~~~~l~~~L~~-~~~~~~~~~~~--~--~~-~~~~~-~-~--~~~~~~~~~l~~~gv~v~~~------~Ris~~  390 (412)
T 1ajs_A          327 ADRILSMRSELRARLEA-LKTPGTWNHIT--D--QI-GMFSF-T-G--LNPKQVEYLINQKHIYLLPS------GRINMC  390 (412)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCSSCCHHHH--H--CC-SSEEE-C-C--CCHHHHHHHHHTTCEECCTT------SEEEGG
T ss_pred             HHHHHHHHHHHHHHHHh-hCCCCCeeEEc--C--CC-ceEEE-e-C--CCHHHHHHHHHhCCEEecCC------cEEEee
Confidence            99999999999999987 44    55432  1  11 22332 1 1  1233 444567789998753      799998


Q ss_pred             CCCCHHHHHHHHHHHHHHHHh
Q 043610          408 NAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       408 ~~~t~edv~~ll~~L~~~~~~  428 (430)
                      . .+++|++++++.|++++++
T Consensus       391 ~-~~~~~i~~~~~~l~~~l~~  410 (412)
T 1ajs_A          391 G-LTTKNLDYVATSIHEAVTK  410 (412)
T ss_dssp             G-CCTTTHHHHHHHHHHHHHH
T ss_pred             e-CCHHHHHHHHHHHHHHHHh
Confidence            4 5899999999999998865

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.86  E-value=7.4e-20  Score=184.87  Aligned_cols=315  Identities=7%  Similarity=-0.050  Sum_probs=202.5

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC---C-
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC---T-  156 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~---~-  156 (430)
                      .++.|++++.+.+.+......     +.+..   ....++++.++++++.+.+ +|+|+ +|++++++.++..+.   + 
T Consensus        60 ~~p~v~~a~~~~~~~~~~~~~-----~~~~~---~~~~~l~~~la~~~~~~~~-~v~~~-~ggtea~~~ai~~~~~~~~~  129 (429)
T 1s0a_A           60 NHPQLNAAMKSQIDAMSHVMF-----GGITH---APAIELCRKLVAMTPQPLE-CVFLA-DSGSVAVEVAMKMALQYWQA  129 (429)
T ss_dssp             SCHHHHHHHHHHHHHCSCCCC-----SSEEC---HHHHHHHHHHHHHSCTTCC-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhcccccc-----cccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-CCHHHHHHHHHHHHHHHhcc
Confidence            589999999998865321111     01111   2245677789999987665 77775 789999999887542   2 


Q ss_pred             ---CCCcEEEEeCChhHHHHHHHHHH----------h---C-CceEEecCCC---CcCCCCCCccccc--cC---CCccE
Q 043610          157 ---PNDPVDYIVTGSWGDKAFKEAQK----------F---C-NPQVIWSGKA---EKYTKIPNFDALE--QN---PDAKY  211 (430)
Q Consensus       157 ---~gd~vl~~~~g~~~~~~~~~a~~----------~---g-~~~~v~~~~~---~~~g~~~d~~~l~--i~---~~~~l  211 (430)
                         |||+|++..+.+.+.... ....          +   . .+..++....   ..++ ..|+++++  ++   +++++
T Consensus       130 ~g~~~~~vi~~~~~yh~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~~~  207 (429)
T 1s0a_A          130 KGEARQRFLTFRNGYHGDTFG-AMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWD-ERDMVGFARLMAAHRHEIAA  207 (429)
T ss_dssp             HTCCCCEEEEETTCCCCSSHH-HHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCC-GGGGHHHHHHHHHHTTTEEE
T ss_pred             cCCCCCeEEEECCCCCCCchh-hhhhcCCchhhcccccCCCCCceEeCCCcccccccch-HHHHHHHHHHHHhCCCCEEE
Confidence               689999877655442110 1100          0   1 2445554210   0122 35777776  44   56777


Q ss_pred             EEEeec-CCCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc----ccccc--ccEEEeCCCcccc-C-CccEE
Q 043610          212 LHICAN-ETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP----VDVTR--FGVIYAGAQKNVG-P-SGVTI  274 (430)
Q Consensus       212 v~i~~~-~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~----idl~~--~d~~~~s~~K~~g-p-~G~g~  274 (430)
                      |++..+ +|+||.+.+      +|.++ +++|+++++|++|+ +|...    ++...  .|++  +++|++| + .++|+
T Consensus       208 vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~G~~~iG~  285 (429)
T 1s0a_A          208 VIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTGGTMTLSA  285 (429)
T ss_dssp             EEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTSSSCCEE
T ss_pred             EEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEE--EecccccCCCccceE
Confidence            777776 799997665      24444 58999999999997 65321    22212  2555  4569996 4 67999


Q ss_pred             EEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---C
Q 043610          275 VIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---N  351 (430)
Q Consensus       275 l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~  351 (430)
                      +++++++++.+.+.....+      .. ....+.|..++.++.++++.+.+    +...++.+++++++++.|++.   .
T Consensus       286 ~~~~~~~~~~l~~~~~~~~------~~-~~t~~~n~~~~~a~~aal~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~  354 (429)
T 1s0a_A          286 TLTTREVAETISNGEAGCF------MH-GPTFMGNPLACAAANASLAILES----GDWQQQVADIEVQLREQLAPARDAE  354 (429)
T ss_dssp             EEECHHHHHHHHTSTTSSC------SC-CCTTTTCHHHHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHGGGGGCT
T ss_pred             EEeCHHHHHHhhcCCCccc------cc-CCCCCCCHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999988776432100000      00 01135678888999999997753    256788888999999999863   1


Q ss_pred             CceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++....  +  .+ ..+.+.+++.....++.+.|.++||.+.+.   .+.+||+++..++++|+++++++|++++++
T Consensus       355 ~~~~~~--~--~g-~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~---~~~iRis~~~~~t~e~i~~~~~~l~~~~~~  423 (429)
T 1s0a_A          355 MVADVR--V--LG-AIGVVETTHPVNMAALQKFFVEQGVWIRPF---GKLIYLMPPYIILPQQLQRLTAAVNRAVQD  423 (429)
T ss_dssp             TEEEEE--E--ET-TEEEEEESSCBCHHHHHHHHHHTTEECCCB---TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred             CEEEEE--E--ee-EEEEEEECCcccHHHHHHHHHHCCCEEecc---CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            232111  1  12 345566664211236888898999998653   257999999899999999999999998653

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.86  E-value=1e-20  Score=189.12  Aligned_cols=302  Identities=10%  Similarity=-0.011  Sum_probs=200.5

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC----
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT----  156 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~----  156 (430)
                      .++.|++++.+.+.++.. +..     .+.   ....+++++.+++++|.  + +++++ +|+++|+..++..+..    
T Consensus        57 ~~~~v~~a~~~~~~~~~~-~~~-----~~~---~~~~~~l~~~la~~~g~--~-~v~~~-~gg~~a~~~al~~~~~~~~~  123 (397)
T 2ord_A           57 SHPRLVEAIKDQAEKLIH-CSN-----LFW---NRPQMELAELLSKNTFG--G-KVFFA-NTGTEANEAAIKIARKYGKK  123 (397)
T ss_dssp             TCHHHHHHHHHHHHHCSC-CCT-----TSE---EHHHHHHHHHHHHTTTS--C-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhccc-Ccc-----ccC---CHHHHHHHHHHHHhcCC--C-eEEEe-CCHHHHHHHHHHHHHHHhhc
Confidence            588999999998865321 111     011   23456888999999984  3 67775 7899999998887642    


Q ss_pred             --C-CCcEEEEeCChhHHHHHHHHHHhC-C------------ceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          157 --P-NDPVDYIVTGSWGDKAFKEAQKFC-N------------PQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       157 --~-gd~vl~~~~g~~~~~~~~~a~~~g-~------------~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                        + +++|++.+..+.+... ..++..| +            +..++         ..|+++++  +++++++|++++++
T Consensus       124 ~~~~~~~vi~~~~~yh~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~---------~~d~~~l~~~l~~~~~~v~~~~~~  193 (397)
T 2ord_A          124 KSEKKYRILSAHNSFHGRTL-GSLTATGQPKYQKPFEPLVPGFEYFE---------FNNVEDLRRKMSEDVCAVFLEPIQ  193 (397)
T ss_dssp             HCTTCCEEEEEBTCCCCSSH-HHHHHSBCHHHHGGGCSCCTTEEEEC---------TTCHHHHHHHCCTTEEEEEECSEE
T ss_pred             CCCCCceEEEEcCCcCCCch-hhhhccCChhhccccCCCCCCeeEec---------CCCHHHHHHHhhcCeEEEEEeccc
Confidence              5 4678777665544211 1122233 2            22221         13667776  67899999999999


Q ss_pred             CCccc-cCC-----CCccc-cCCCcEEEEeccCc-CCC--Ccccccc----ccEEEeCCCcccc-CCccEEEEEcHHHHh
Q 043610          219 TIHGV-EFK-----EYPSA-KNSTGILVADMSSN-FCS--KPVDVTR----FGVIYAGAQKNVG-PSGVTIVIVRKDLLG  283 (430)
Q Consensus       219 t~tG~-~~p-----ei~~~-~~~g~~lvvD~a~s-~G~--~~idl~~----~d~~~~s~~K~~g-p~G~g~l~v~~~~~~  283 (430)
                      |+||. ..+     +|.++ +++|+++++|++|+ ++.  .++.+..    .|++  +++|++| ..++|+++++++++ 
T Consensus       194 nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~G~~~~~~~~~-  270 (397)
T 2ord_A          194 GESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPIGAVIVNERAN-  270 (397)
T ss_dssp             CTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEEEECSTTC-
T ss_pred             CCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccCCCcCeEEEEEchHhc-
Confidence            99999 666     45554 58999999999987 432  1233222    2555  5589997 23499999988764 


Q ss_pred             ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-CceecCCCCCC
Q 043610          284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYKCPVEKSV  362 (430)
Q Consensus       284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~~~~~~~~  362 (430)
                      .+.+.           .. ....+.|...+.++.++|+.+.+    +++.++.+++++++++.|++.. ++..+. ....
T Consensus       271 ~l~~~-----------~~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~  333 (397)
T 2ord_A          271 VLEPG-----------DH-GTTFGGNPLACRAGVTVIKELTK----EGFLEEVEEKGNYLMKKLQEMKEEYDVVA-DVRG  333 (397)
T ss_dssp             CCCTT-----------SS-CCSSTTCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHHHHHHHHHCTTEE-EEEE
T ss_pred             ccCCC-----------Cc-CCCCCCCHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHHHHhCCceE-EEEE
Confidence            43210           00 11235677788888888987542    4678888899999999987631 232210 0011


Q ss_pred             CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+ ..+.+.+++.....++.+.|.++||.+.++.  .+.+||++...++++|+++++++|++++++
T Consensus       334 ~g-~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~--~~~iRis~~~~~~~e~i~~~~~~l~~~l~~  396 (397)
T 2ord_A          334 MG-LMIGIQFREEVSNREVATKCFENKLLVVPAG--NNTIRFLPPLTVEYGEIDLAVETLKKVLQG  396 (397)
T ss_dssp             ET-TEEEEEECTTSCHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             Ee-EEEEEEECChHHHHHHHHHHHHCCCEEccCC--CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence            22 4566777642223379999988999987652  457999998889999999999999998753

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.86  E-value=1.5e-20  Score=189.75  Aligned_cols=283  Identities=12%  Similarity=0.044  Sum_probs=190.9

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHH--HHHHhhcCCC------------CCcEEEEeCChhHHHHHHHHHHhC-C
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQF--AAVPLNLCTP------------NDPVDYIVTGSWGDKAFKEAQKFC-N  182 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~--~~~~~sl~~~------------gd~vl~~~~g~~~~~~~~~a~~~g-~  182 (430)
                      .++|+.++++++++++ +|++ ++|+++++  ..++..+..+            +|+|++..+++.++.  ..++..| +
T Consensus        79 ~~lr~~ia~~~~~~~~-~i~~-t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~--~~~~~~g~~  154 (422)
T 3d6k_A           79 ADIRELWAEALGLPAD-LVVA-QDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF--TITEHFGFE  154 (422)
T ss_dssp             HHHHHHHHHHHTCCGG-GEEE-CSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH--HHHHHHTCE
T ss_pred             HHHHHHHHHHhCCChh-HEEE-ecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH--HHHHHcCCE
Confidence            4788999999999876 7776 47889987  5666666544            346888777776643  4456677 7


Q ss_pred             ceEEecCCCCcCCCCCCccccc--cCC-CccEEE-EeecCCCccccCC-----CCccc-c-CCCcEEEEeccCc---CCC
Q 043610          183 PQVIWSGKAEKYTKIPNFDALE--QNP-DAKYLH-ICANETIHGVEFK-----EYPSA-K-NSTGILVADMSSN---FCS  248 (430)
Q Consensus       183 ~~~v~~~~~~~~g~~~d~~~l~--i~~-~~~lv~-i~~~~t~tG~~~p-----ei~~~-~-~~g~~lvvD~a~s---~G~  248 (430)
                      ++.++..+   .|  +|+++++  +++ ++++|+ +++++||||.+++     +|.++ + ++|+++++|++|+   ++.
T Consensus       155 ~~~v~~~~---~g--~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~  229 (422)
T 3d6k_A          155 MINVPMTD---EG--PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSD  229 (422)
T ss_dssp             EEEEEEET---TE--ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS
T ss_pred             EEecCCCC---CC--CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCC
Confidence            77777643   23  7888887  554 789888 6899999999999     35554 5 7899999999997   322


Q ss_pred             C-----cc-cc------ccccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHH
Q 043610          249 K-----PV-DV------TRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIY  314 (430)
Q Consensus       249 ~-----~i-dl------~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~  314 (430)
                      .     ++ ++      .+..+++.|++|+ +.+|  +|++++++++++.+....          .  ....++|...+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~l~~~l~~~~----------~--~~~~~~~~~~q~  296 (422)
T 3d6k_A          230 EFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKENIEWYASHA----------N--VRGIGPNKLNQL  296 (422)
T ss_dssp             CCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHHHHHHHHHHH----------H--HHCSCCCHHHHH
T ss_pred             CCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHHHHHHHHHHH----------H--hhcCCCCHHHHH
Confidence            1     22 11      1224889999999 4336  899999998877643200          0  011356777788


Q ss_pred             HHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcc---CC-ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcC
Q 043610          315 MCGLVFEYLLE-LGGLNEVEKMNRKKAELLYNVIDGS---NG-FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEK  389 (430)
Q Consensus       315 a~~~al~~l~~-~~g~~~v~~~~~~l~~~l~~~l~~~---~G-~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~G  389 (430)
                      ++..+|+.... ...++.+++++++.++++++.|.+.   .| +.+..  + . ....+.+.+++. ...++.+.|.++|
T Consensus       297 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~--p-~-~g~~~~~~~~~~-~~~~~~~~l~~~g  371 (422)
T 3d6k_A          297 AHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTS--P-T-GGYFISVDVVPG-TASRVVELAKEAG  371 (422)
T ss_dssp             HHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECC--C-S-BSSCEEEEESTT-CHHHHHHHHHHTT
T ss_pred             HHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeC--C-C-cceEEEEECCCC-CHHHHHHHHHHCC
Confidence            77777753100 0135566777777777777777642   22 44432  2 1 223455677642 2336777889999


Q ss_pred             CeecC-CCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          390 MVQLK-GHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       390 i~~~~-g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      |.+.+ |..       ..+++|||++. +++++++++++.|++++++
T Consensus       372 V~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~  417 (422)
T 3d6k_A          372 IALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVLM  417 (422)
T ss_dssp             EECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHHH
Confidence            99887 431       13589999997 8999999999999998764

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.86  E-value=1.2e-20  Score=189.73  Aligned_cols=275  Identities=15%  Similarity=0.064  Sum_probs=183.2

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++++.+++++|.+.  . +++ ++|++|+..++. ++++||+|++....|.+..  +...++..| +++.++.     
T Consensus        69 ~~~l~~~la~~~g~~~--~-i~~-~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~-----  138 (403)
T 3cog_A           69 RNCLEKAVAALDGAKY--C-LAF-ASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC-----  138 (403)
T ss_dssp             HHHHHHHHHHHHTCSE--E-EEE-SCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT-----
T ss_pred             HHHHHHHHHHHhCCCc--E-EEE-CCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC-----
Confidence            5688999999999862  4 444 456799999988 8899999998877765532  222234567 6655543     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCC-cEEEEeccCcCCC--CccccccccEEEeCCCc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNST-GILVADMSSNFCS--KPVDVTRFGVIYAGAQK  265 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g-~~lvvD~a~s~G~--~~idl~~~d~~~~s~~K  265 (430)
                          .|+++++  +++++++|++++++|+||.+.|  +|.++ +++| +++++|++++.+.  .++++ ..|+++.|++|
T Consensus       139 ----~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~-~~div~~S~sK  213 (403)
T 3cog_A          139 ----SKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLAL-GADISMYSATK  213 (403)
T ss_dssp             ----TSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTT-TCSEEEEETTT
T ss_pred             ----CCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCcccc-CCeEEEEcChh
Confidence                1567776  7889999999999999999999  78886 7899 9999999998775  45553 34899999999


Q ss_pred             ccc-CCc--cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          266 NVG-PSG--VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       266 ~~g-p~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      ++| |.|  .|+++++ +++++.+.+.   ...         ..++++....+++..+++.+      +...++..+.+.
T Consensus       214 ~~~g~~~~~~G~v~~~~~~l~~~l~~~---~~~---------~g~~~~~~~~~~~~~~l~~l------~~r~~~~~~n~~  275 (403)
T 3cog_A          214 YMNGHSDVVMGLVSVNCESLHNRLRFL---QNS---------LGAVPSPIDCYLCNRGLKTL------HVRMEKHFKNGM  275 (403)
T ss_dssp             TTTCSSCCCCEEEEECCHHHHHHHHHH---HHH---------HCCCCCHHHHHHHHHHHTTH------HHHHHHHHHHHH
T ss_pred             hccCCCCCeEEEEEECcHHHHHHHHHH---HHh---------cCCCCCHHHHHHHHhhhhHH------HHHHHHHHHHHH
Confidence            996 766  4999995 6776654210   000         11355666666665566532      333444444444


Q ss_pred             HHHHHHHcc--------------CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeec---CCC--------
Q 043610          342 LLYNVIDGS--------------NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQL---KGH--------  396 (430)
Q Consensus       342 ~l~~~l~~~--------------~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~---~g~--------  396 (430)
                      .+.+.+++.              +|+++..... .....+++|.+++.  ..+..+.|.+.|+...   .|.        
T Consensus       276 ~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~-~~~g~~~~~~l~~~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p  352 (403)
T 3cog_A          276 AVAQFLESNPWVEKVIYPGLPSHPQHELVKRQC-TGCTGMVTFYIKGT--LQHAEIFLKNLKLFTLAESLGGFESLAELP  352 (403)
T ss_dssp             HHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHC-SCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCSSSSCEEECT
T ss_pred             HHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcC-CCCceEEEEEecCC--HHHHHHHHHhCCcceEccCCCCcceeeecc
Confidence            555555432              1222221000 11245788888642  2345556677787532   120        


Q ss_pred             -----C------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          397 -----R------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       397 -----~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                           .            ..+.||+|++..+++++|+++.++|+++++
T Consensus       353 ~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~~  400 (403)
T 3cog_A          353 AIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHP  400 (403)
T ss_dssp             TTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHCC
T ss_pred             cccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhhc
Confidence                 0            135799999999999999999999987653

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.86  E-value=1.3e-20  Score=190.36  Aligned_cols=284  Identities=11%  Similarity=0.028  Sum_probs=193.0

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHH--HHHHhhcCC--C----------CCcEEEEeCChhHHHHHHHHHHhC-C
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQF--AAVPLNLCT--P----------NDPVDYIVTGSWGDKAFKEAQKFC-N  182 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~--~~~~~sl~~--~----------gd~vl~~~~g~~~~~~~~~a~~~g-~  182 (430)
                      .++|+.++++++++++ +|++ ++|+++++  +.++..++.  |          ||+|++..+++.++.  ..++..| +
T Consensus        81 ~~lr~~ia~~~~~~~~-~i~~-t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~--~~~~~~g~~  156 (427)
T 3ppl_A           81 VDIRQIWADLLGVPVE-QVLA-GDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF--SITERFGFE  156 (427)
T ss_dssp             HHHHHHHHHHHTSCGG-GEEE-CSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH--HHHHHTTCE
T ss_pred             HHHHHHHHHHhCCCcc-eEEE-eCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHH--HHHHHcCCE
Confidence            4788999999999876 7776 57899999  577777765  6          899998888776643  4566678 8


Q ss_pred             ceEEecCCCCcCCCCCCccccc--c-CCCccEEEEe-ecCCCccccCC-----CCcc-c-cCCCcEEEEeccCcC---CC
Q 043610          183 PQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHIC-ANETIHGVEFK-----EYPS-A-KNSTGILVADMSSNF---CS  248 (430)
Q Consensus       183 ~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~-~~~t~tG~~~p-----ei~~-~-~~~g~~lvvD~a~s~---G~  248 (430)
                      ++.++..+   .|  +|+++++  + .+++++|+++ +++||||.++|     +|.+ + +++|+++|+|++|+.   +.
T Consensus       157 ~~~v~~~~---~g--~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~  231 (427)
T 3ppl_A          157 MISVPMNE---DG--PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTD  231 (427)
T ss_dssp             EEEEEEET---TE--ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSS
T ss_pred             EEEeCCCC---CC--CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCC
Confidence            88887753   23  7888887  5 4789988865 78999999999     3555 3 589999999999874   22


Q ss_pred             C---ccccc---------cccEEEeCCCccccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHH
Q 043610          249 K---PVDVT---------RFGVIYAGAQKNVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYM  315 (430)
Q Consensus       249 ~---~idl~---------~~d~~~~s~~K~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a  315 (430)
                      .   ++++.         +..+++.|++|+++| .++|+++.++++++.+..       ..   .  ....+++...+.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~-------~~---~--~~~~~~~~~~q~~  299 (427)
T 3ppl_A          232 EFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTG-------HA---G--IRGIGPNKVNQLA  299 (427)
T ss_dssp             CCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHH-------HH---H--HHCSCCCHHHHHH
T ss_pred             CCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHH-------Hh---h--cccCCCCHHHHHH
Confidence            1   22221         224889999999543 348999999988776421       00   0  0112445566666


Q ss_pred             HHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCC
Q 043610          316 CGLVFEYLL-ELGGLNEVEKMNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKM  390 (430)
Q Consensus       316 ~~~al~~l~-~~~g~~~v~~~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi  390 (430)
                      +..+++... -...++...++++++++.+.+.|.+.    .++.+..  +  .....+.+.+++. ...++.+.|.++||
T Consensus       300 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~--p--~~g~~~~~~~~~~-~~~~~~~~l~~~gv  374 (427)
T 3ppl_A          300 HARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTV--P--AGGYFISLDVVPG-TASRVAELAKEAGI  374 (427)
T ss_dssp             HHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECC--C--SBSSCEEEECSTT-CHHHHHHHHHHTTE
T ss_pred             HHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeC--C--CccEEEEEECCcc-hHHHHHHHHHHCCC
Confidence            666664310 01135566667777777777766542    1344432  2  1234566777753 23378888999999


Q ss_pred             eecC-CCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          391 VQLK-GHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       391 ~~~~-g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+ |..       ..+++|||+... ++++++++++.|++++++
T Consensus       375 ~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~  419 (427)
T 3ppl_A          375 ALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLL  419 (427)
T ss_dssp             ECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHH
T ss_pred             EEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHH
Confidence            9887 321       246899999644 899999999999988764

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.85  E-value=2.3e-20  Score=186.92  Aligned_cols=276  Identities=11%  Similarity=0.022  Sum_probs=184.7

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   +++++ +||++|++.++.+++++||+|++....|.+.. .. ...+..| ++..++.   
T Consensus        66 ~~~~~l~~~la~~~g~~---~~~~~-~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~---  138 (392)
T 3qhx_A           66 PTRTALEAALAAVEDAA---FGRAF-SSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVAL---  138 (392)
T ss_dssp             HHHHHHHHHHHHHTTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECT---
T ss_pred             hHHHHHHHHHHHHhCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCC---
Confidence            34668999999999986   56665 67899999999999999999998777765532 11 2224456 5555543   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--ccccccccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--PVDVTRFGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--~idl~~~d~~~~s~~  264 (430)
                            .|+++++  +.+++++|++.+++|++|.+.|  +|.++ +++|+++++|++|+.+..  ++++ ..|+++.|+|
T Consensus       139 ------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~~~~~-~~di~~~S~s  211 (392)
T 3qhx_A          139 ------ADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQPLSL-GADVVLHSTT  211 (392)
T ss_dssp             ------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGG-TCSEEEEETT
T ss_pred             ------CCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCChHHh-CCcEEEEcCc
Confidence                  2567776  7889999999999999999999  78886 689999999999986643  2222 2389999999


Q ss_pred             ccccCCc---cEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          265 KNVGPSG---VTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       265 K~~gp~G---~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      |++|++|   .|+++.+ +++.+.+..       +.  ..   ...+++....+.+...++      .++...++..+.+
T Consensus       212 K~lg~~g~~~~G~v~~~~~~~~~~l~~-------~~--~~---~g~~~~~~~~~~~~~~l~------~l~~~~~~~~~~~  273 (392)
T 3qhx_A          212 KYIGGHSDVVGGALVTNDEELDQSFAF-------LQ--NG---AGAVPGPFDAYLTMRGLK------TLVLRMQRHSENA  273 (392)
T ss_dssp             TTTTCSSCCCCEEEEESCHHHHHHHHH-------HH--HH---HCCCCCHHHHHHHHHHHT------THHHHHHHHHHHH
T ss_pred             cccCCCCCceEEEEEECcHHHHHHHHH-------HH--Hh---cCCCCCHHHHHHHHhhhh------HHHHHHHHHHHHH
Confidence            9998766   7999987 466554321       00  00   112344444444444443      2455567777788


Q ss_pred             HHHHHHHHccCCceec--CCCCC-----------CCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCC----------
Q 043610          341 ELLYNVIDGSNGFYKC--PVEKS-----------VRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGH----------  396 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~~--~~~~~-----------~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~----------  396 (430)
                      +.+.+.|.+.+++..+  +.-+.           .....+++|.+++..... .|+..|+..|+.+..|.          
T Consensus       274 ~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~  353 (392)
T 3qhx_A          274 AAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVESLIEHPSA  353 (392)
T ss_dssp             HHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSCEEECGGG
T ss_pred             HHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCceeeCccc
Confidence            8888888875544322  11011           112457889987521222 56666665554432221          


Q ss_pred             ------------CCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          397 ------------RSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       397 ------------~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                                  ...+.||+|++..+++++++.+.++|
T Consensus       354 ~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al  391 (392)
T 3qhx_A          354 MTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL  391 (392)
T ss_dssp             TSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred             ccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence                        12346999999988888888888776

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.85  E-value=4.4e-21  Score=191.30  Aligned_cols=317  Identities=14%  Similarity=0.055  Sum_probs=202.5

Q ss_pred             CceeecCCC-------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh---C---CCCCcEE
Q 043610           70 RVFNFAAGP-------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL---N---IPQEYSV  136 (430)
Q Consensus        70 ~~~l~~~gp-------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~---g---~~~~~~v  136 (430)
                      .+++|+.|-       .++++.|++++.+.+.+..        .+++++.  .-..++|+.+++++   +   ++++ +|
T Consensus        27 ~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~--~g~~~lr~~la~~~~~~~~~~~~~~-~v   95 (396)
T 2q7w_A           27 GKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET--------TKNYLGI--DGIPEFGRCTQELLFGKGSALINDK-RA   95 (396)
T ss_dssp             -CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCC--------CCCCCCT--TCCHHHHHHHHHHHHCTTCHHHHTT-CE
T ss_pred             CceecccccccCCCCCccCcHHHHHHHHhhcCccc--------ccCCCCC--CCCHHHHHHHHHHHhcCCCCccccc-cE
Confidence            456666653       3567899999988765311        1111111  11236677777777   2   1244 67


Q ss_pred             EE-EeCcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC---
Q 043610          137 LF-LQGGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP---  207 (430)
Q Consensus       137 v~-~~~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~---  207 (430)
                      ++ .++|++++++.++..+  +.+||+|++..+++.++.  ..++..| +++.++....  .+..+|+++++  +++   
T Consensus        96 ~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~  171 (396)
T 2q7w_A           96 RTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK--SVFNSAGLEVREYAYYDA--ENHTLDFDALINSLNEAQA  171 (396)
T ss_dssp             EEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHH--HHHHHTTCEEEEEECEET--TTTEECHHHHHHHHTTCCT
T ss_pred             EEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHH--HHHHHcCCceEEEecccC--CCCCcCHHHHHHHHHhCCC
Confidence            65 2589999999987655  368999999888877643  4456677 7777776321  12246788876  443   


Q ss_pred             CccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-------ccc-cccc---cEEEeCCCccccCC
Q 043610          208 DAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-------PVD-VTRF---GVIYAGAQKNVGPS  270 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-------~id-l~~~---d~~~~s~~K~~gp~  270 (430)
                      +++++++++++|+||.+++  +   |.++ +++|+++++|++|+....       ++. +...   .+++.|++|++|++
T Consensus       172 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  251 (396)
T 2q7w_A          172 GDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLY  251 (396)
T ss_dssp             TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCG
T ss_pred             CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccc
Confidence            5788999999999999998  3   4444 578999999999764322       221 2221   37789999999988


Q ss_pred             c--cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHHHH
Q 043610          271 G--VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKKAE  341 (430)
Q Consensus       271 G--~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l~~  341 (430)
                      |  +|++++   +++.++.+..    .+  ...  .....+++|...+.++..+|+..  .+  ...++.+.++++++++
T Consensus       252 G~riG~~~~~~~~~~~~~~~~~----~~--~~~--~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~  323 (396)
T 2q7w_A          252 NERVGACTLVAADSETVDRAFS----QM--KAA--IRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQ  323 (396)
T ss_dssp             GGCCEEEEEECSSHHHHHHHHH----HH--HHH--HHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHH
T ss_pred             ccccceEEEEcCCHHHHHHHHH----HH--HHH--HhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence            9  699997   5644332110    00  000  00123456777888887777542  00  1246788899999999


Q ss_pred             HHHHHHHccCC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHH
Q 043610          342 LLYNVIDGSNG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       342 ~l~~~l~~~~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~  417 (430)
                      ++++.|++ .|    +++..  +  .....+.+.++    ...+...|.++||.+.+|      +|||++. .+++|+++
T Consensus       324 ~l~~~L~~-~~~~~~~~~~~--~--~~~~~~~~~~~----~~~~~~~l~~~gv~v~~~------~Ris~~~-~~~e~i~~  387 (396)
T 2q7w_A          324 LFVNTLQE-KGANRDFSFII--K--QNGMFSFSGLT----KEQVLRLREEFGVYAVAS------GRVNVAG-MTPDNMAP  387 (396)
T ss_dssp             HHHHHHHH-TTCCSCCTHHH--H--CCSSEEECCCC----HHHHHHHHHHHCEECCTT------CEEEGGG-CCTTTHHH
T ss_pred             HHHHHHHh-cCCCCCcceec--C--CCceEEEecCC----HHHHHHHHHhcCeeecCC------ceEEEee-cCHHHHHH
Confidence            99999987 44    54432  1  12222222222    224555677889998753      7999985 48999999


Q ss_pred             HHHHHHHH
Q 043610          418 LVAFMKDF  425 (430)
Q Consensus       418 ll~~L~~~  425 (430)
                      ++++|+++
T Consensus       388 ~~~~l~~~  395 (396)
T 2q7w_A          388 LCEAIVAV  395 (396)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            99999875

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.85  E-value=1.1e-20  Score=189.03  Aligned_cols=320  Identities=10%  Similarity=0.027  Sum_probs=207.7

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .+..+++..|.     +..++.|++++.+.+.+....+      .....   ...+++++.+++++|.+   +++++ +|
T Consensus        38 g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~------~~~~~---~~~~~l~~~la~~~~~~---~v~~~-~g  104 (406)
T 4adb_A           38 GKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTG------NGYTN---EPVLRLAKKLIDATFAD---RVFFC-NS  104 (406)
T ss_dssp             CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCC------TTSCC---HHHHHHHHHHHHHSSCS---EEEEE-SS
T ss_pred             CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccccc------CCcCC---HHHHHHHHHHHhhCCCC---eEEEe-Cc
Confidence            34455555541     1238899999999886522111      01111   33568889999999864   67775 78


Q ss_pred             HHHHHHHHHhhcCC-------CC-CcEEEEeCChhHHHHHHHHHHhC-CceE----EecCCCCcCC--CCCCccccc--c
Q 043610          143 ATTQFAAVPLNLCT-------PN-DPVDYIVTGSWGDKAFKEAQKFC-NPQV----IWSGKAEKYT--KIPNFDALE--Q  205 (430)
Q Consensus       143 aT~a~~~~~~sl~~-------~g-d~vl~~~~g~~~~~~~~~a~~~g-~~~~----v~~~~~~~~g--~~~d~~~l~--i  205 (430)
                      +++|++.++..+..       +| |+|++..+++.+...  .+...+ ....    .+...  +..  ...|+++|+  +
T Consensus       105 g~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l  180 (406)
T 4adb_A          105 GAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTL--FTVSAGGQPAYSQDFAPLPA--DIRHAAYNDINSASALI  180 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSH--HHHHHSSCGGGTGGGCSCCS--SEEEECTTCHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcH--HHhhccCCccccccCCCCCC--CceEeCCCcHHHHHHHh
Confidence            99999998887743       55 888887776655321  122222 2111    11100  000  014667776  6


Q ss_pred             CCCccEEEEeecCCCccccC--C-----CCccc-cCCCcEEEEeccCc-CCC--Cccccc--cc--cEEEeCCCccccCC
Q 043610          206 NPDAKYLHICANETIHGVEF--K-----EYPSA-KNSTGILVADMSSN-FCS--KPVDVT--RF--GVIYAGAQKNVGPS  270 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~~~--p-----ei~~~-~~~g~~lvvD~a~s-~G~--~~idl~--~~--d~~~~s~~K~~gp~  270 (430)
                      ++++++|+++ ++|++|.++  +     +|.++ +++|+++++|++|+ +|.  .++.++  +.  |++  +++|++| +
T Consensus       181 ~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~  256 (406)
T 4adb_A          181 DDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-G  256 (406)
T ss_dssp             STTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-T
T ss_pred             cCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-C
Confidence            7889999998 778888776  4     45554 58999999999985 432  222222  22  455  4599998 5


Q ss_pred             c--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          271 G--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       271 G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      |  +|++++++++++.+.+..           . ....+.+...+.++.++|+.+.+    +++.++++++++++++.|+
T Consensus       257 G~r~G~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~l~  320 (406)
T 4adb_A          257 GFPVGALLATEECARVMTVGT-----------H-GTTYGGNPLASAVAGKVLELINT----PEMLNGVKQRHDWFVERLN  320 (406)
T ss_dssp             TSCCEEEEECHHHHHTCCTTS-----------S-CCSSTTCHHHHHHHHHHHHHHSS----HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEEcHHHHhhhccCC-----------c-CCCCCCCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHH
Confidence            6  899999999987654311           0 11235677788888888886531    6888899999999999998


Q ss_pred             ccCC-ceecCCCCCCCccceEEEEcCCCc--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          349 GSNG-FYKCPVEKSVRSFMNVPFTLEKSD--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       349 ~~~G-~~~~~~~~~~rs~~iv~f~~~~~~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +... +.... +.. .....+.+.+++..  ...++.+.|.++||.+.++.  .+.+|+++...++++|++++++.|+++
T Consensus       321 ~~~~~~~~~~-~~~-~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~e~i~~~~~~l~~~  396 (406)
T 4adb_A          321 TINHRYGLFS-EVR-GLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG--GNVVRFAPALNVSEEEVTTGLDRFAAA  396 (406)
T ss_dssp             HHHHHHCCEE-EEE-EETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCce-EEE-EEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC--CCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence            6311 11111 111 12245667776421  23379999999999987643  458999999899999999999999998


Q ss_pred             HHh
Q 043610          426 QAK  428 (430)
Q Consensus       426 ~~~  428 (430)
                      +++
T Consensus       397 l~~  399 (406)
T 4adb_A          397 CEH  399 (406)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.85  E-value=8.6e-21  Score=188.77  Aligned_cols=308  Identities=8%  Similarity=-0.016  Sum_probs=191.6

Q ss_pred             CceeecC--CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           70 RVFNFAA--GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~--gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+|+++.  |+.++++.|++++..+.                .+.  ...+++++.+++++|+++..+++++ +|+|+++
T Consensus        29 ~v~~~~~~~~~~~~~~~v~~a~~~~~----------------~~~--~~~~~~~~~~a~~~g~~~~~~~~~~-~ggt~a~   89 (374)
T 2aeu_A           29 ALYDLSGLSGGFLIDEKDKALLNTYI----------------GSS--YFAEKVNEYGLKHLGGDENDKCVGF-NRTSSAI   89 (374)
T ss_dssp             GCEECSSCCCCCCCCHHHHHHHTSTT----------------HHH--HHHHHHHHHHHHHHTCCTTEEEEEE-SSHHHHH
T ss_pred             ceeeecccCCCCCCCHHHHHHHHHhc----------------Cch--HHHHHHHHHHHHHhCCCCcceEEEE-cChHHHH
Confidence            4777665  47899999999986211                111  1225667777889998421267665 8899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHH-HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccE-EEEeecCCCcc-
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGD-KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKY-LHICANETIHG-  222 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~-~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~l-v~i~~~~t~tG-  222 (430)
                      ..++.++  +||+|++..+++.++ .+++.++..| +++.+ .          |+++++ .++++++ |++++++|+|| 
T Consensus        90 ~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-~----------d~~~l~~~~~~~~~~v~~~~p~nptG~  156 (374)
T 2aeu_A           90 LATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES-D----------KVGEILNKIDKDTLVIITGSTMDLKVI  156 (374)
T ss_dssp             HHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE-S----------CHHHHHTTCCTTEEEEEECBCTTSCBC
T ss_pred             HHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe-C----------CHHHHHhcCCCccEEEEEccCCCCCCC
Confidence            9999987  899999887754332 2233455667 55544 1          344554 4567999 99999999999 


Q ss_pred             ccCC--CCccc-cCCCcEEEEeccCcCCC-----C--ccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc
Q 043610          223 VEFK--EYPSA-KNSTGILVADMSSNFCS-----K--PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM  292 (430)
Q Consensus       223 ~~~p--ei~~~-~~~g~~lvvD~a~s~G~-----~--~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~  292 (430)
                      ...+  +|.++ +++|+++++|++++.+.     .  ++++ ..|++++|+||+++..++|+++.++++++.+...    
T Consensus       157 ~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~----  231 (374)
T 2aeu_A          157 ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL-GADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIE----  231 (374)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH-TCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHH----
T ss_pred             CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc-CCcEEEecCcccccCcceEEEEECHHHHHHHHHh----
Confidence            5656  67775 68999999999887653     1  1221 2379999999999534779999999988764320    


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH----HHHHHHHHHcc---CCceecCCCCCCCcc
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK----AELLYNVIDGS---NGFYKCPVEKSVRSF  365 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l----~~~l~~~l~~~---~G~~~~~~~~~~rs~  365 (430)
                         .   .  ...++++...++++..+++.+.. .-++...++.+.+    .+.+.+.|.+.   .|+.+.+ .+   ..
T Consensus       232 ---~---~--~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~-~~---~g  298 (374)
T 2aeu_A          232 ---G---T--KFGLEAQPPLLAGIYRALKNFNL-ERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYER-TP---TG  298 (374)
T ss_dssp             ---H---H--TTTCBCCHHHHHHHHHHHHHCCH-HHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEE-CS---SE
T ss_pred             ---h---c--cccCCCCHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceee-CC---ce
Confidence               0   0  11135677777888888875311 0112222223333    35555555432   2444321 11   11


Q ss_pred             ceEEE-EcCCCchh----HHHHHH-HHHcCCeecCCCCC---CCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          366 MNVPF-TLEKSDLE----AEFVKE-AAKEKMVQLKGHRS---VGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       366 ~iv~f-~~~~~~~~----~~~~~~-L~~~Gi~~~~g~~~---~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+.. ..++ ..+    .++... |.++||.+.+|...   .+++||+++. ...++++++++++|++.++.
T Consensus       299 ~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~  370 (374)
T 2aeu_A          299 FVIKRVYKDD-TINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKM  370 (374)
T ss_dssp             EEEEEEESSH-HHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHH
T ss_pred             EEEEeecccc-cccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHH
Confidence            22221 1221 111    126544 45689998876432   3479999875 22344599999999998765

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.85  E-value=1.2e-20  Score=203.41  Aligned_cols=294  Identities=12%  Similarity=0.022  Sum_probs=206.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+.+.++.+++++|.+.  . +++++|+++++.+++.++++|||+|++..+.|.+...  .++..| ++++++...+ .
T Consensus       205 g~v~~~ee~la~l~G~d~--~-i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--~~~~~G~~~v~v~~~~~-~  278 (755)
T 2vyc_A          205 GAFGESEKYAARVFGADR--S-WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--GLMLTGAKPVYMVPSRN-R  278 (755)
T ss_dssp             HHHHHHHHHHHHHHTCSE--E-EEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--HHHHHCCEEEEECCCBC-T
T ss_pred             cHHHHHHHHHHHHhCCCc--e-EEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--HHHHcCCEEEEEeCCCC-c
Confidence            456788999999999863  4 5556888899999999999999999998888877532  244567 7777766432 2


Q ss_pred             CC--CCC-----Cccccc--c--CCCcc--------EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC--
Q 043610          194 YT--KIP-----NFDALE--Q--NPDAK--------YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK--  249 (430)
Q Consensus       194 ~g--~~~-----d~~~l~--i--~~~~~--------lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~--  249 (430)
                      ++  ..+     |+++++  +  .++++        +++++++ |++|.+.|  +|.++ +++|+++++|++|+.+..  
T Consensus       279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~  357 (755)
T 2vyc_A          279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFN  357 (755)
T ss_dssp             TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGC
T ss_pred             cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccC
Confidence            33  124     777776  4  34555        8999986 78999999  78886 789999999999864211  


Q ss_pred             c----c-cccc--cc------EEEeCCCccc-cCCccEEEEEcHH--HHhccCCCCCccccccchhhcCCCCCCccHHHH
Q 043610          250 P----V-DVTR--FG------VIYAGAQKNV-GPSGVTIVIVRKD--LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCI  313 (430)
Q Consensus       250 ~----i-dl~~--~d------~~~~s~~K~~-gp~G~g~l~v~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~  313 (430)
                      +    . .+..  .|      +++.|+||++ ||.|.|+++++++  .++..        .+..... ....+||++..+
T Consensus       358 ~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~--------~~~~~~~-~~~s~sp~~~~i  428 (755)
T 2vyc_A          358 PIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFS--------RFNQAYM-MHATTSPLYAIC  428 (755)
T ss_dssp             GGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHH--------HHHHHHH-HTSCSSCCHHHH
T ss_pred             cccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHH--------HHHHHHH-HhCCCCHHHHHH
Confidence            1    0 0111  24      4999999999 5888899998765  21100        0000001 122368999999


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC---------ceecCCCC------------------------
Q 043610          314 YMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG---------FYKCPVEK------------------------  360 (430)
Q Consensus       314 ~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G---------~~~~~~~~------------------------  360 (430)
                      +++..|++++... |.++..++..+++++++++|.+..|         ++++....                        
T Consensus       429 aal~aA~~~l~~~-gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (755)
T 2vyc_A          429 ASNDVAVSMMDGN-SGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQ  507 (755)
T ss_dssp             HHHHHHHHHHSTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCG
T ss_pred             HHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchh
Confidence            9999999987643 3467888999999999999987555         55543110                        


Q ss_pred             ------------------C---CCccceEEEEcCCC---------chhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCC
Q 043610          361 ------------------S---VRSFMNVPFTLEKS---------DLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNA  409 (430)
Q Consensus       361 ------------------~---~rs~~iv~f~~~~~---------~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~  409 (430)
                                        .   ...+..++|.+++.         +.+. ++.+.|+++||++..  ...+.+|++++..
T Consensus       508 ~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~--~~~~~v~~~~~~g  585 (755)
T 2vyc_A          508 DCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTR--TTDFQIMFLFSMG  585 (755)
T ss_dssp             GGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSE--ECSSEEEEECCTT
T ss_pred             hhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEee--cCCCeEEEEECCC
Confidence                              0   00245778887731         2333 677889889988643  2345799999999


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 043610          410 MPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       410 ~t~edv~~ll~~L~~~~~  427 (430)
                      +|++++++++++|+++.+
T Consensus       586 ~t~~~~~~l~~al~~~~~  603 (755)
T 2vyc_A          586 VTRGKWGTLVNTLCSFKR  603 (755)
T ss_dssp             CCTTTTHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            999999999999999865

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.85  E-value=3.7e-20  Score=186.52  Aligned_cols=316  Identities=8%  Similarity=-0.047  Sum_probs=197.5

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHh---hcCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPL---NLCTP  157 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~---sl~~~  157 (430)
                      .++.|++++.+.+.+... +.    . .+.+  .....++++.|+++++.+...+|+++ +|++++++.++.   .+.++
T Consensus        58 ~~~~v~~a~~~~~~~~~~-~~----~-~~~~--~~~~~~l~~~la~~~~~~~~~~v~~~-~g~~~a~~~~~~~a~~~~~~  128 (426)
T 1sff_A           58 LHPKVVAAVEAQLKKLSH-TC----F-QVLA--YEPYLELCEIMNQKVPGDFAKKTLLV-TTGSEAVENAVKIARAATKR  128 (426)
T ss_dssp             TCHHHHHHHHHHTTTCSC-CC----T-TTEE--CHHHHHHHHHHHHHSSCSSCEEEEEE-SSHHHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHhCCC-cc----c-cccC--CHHHHHHHHHHHHhCCcccccEEEEe-CchHHHHHHHHHHHHHhhCC
Confidence            678999999988754211 11    0 1111  13456888999999932221267665 789999999877   55566


Q ss_pred             CCcEEEEeCChhHHHHHHHHHHhC-C-------------ceEEecCCC-CcCCCCCCccccc--cC-----CCccEEEEe
Q 043610          158 NDPVDYIVTGSWGDKAFKEAQKFC-N-------------PQVIWSGKA-EKYTKIPNFDALE--QN-----PDAKYLHIC  215 (430)
Q Consensus       158 gd~vl~~~~g~~~~~~~~~a~~~g-~-------------~~~v~~~~~-~~~g~~~d~~~l~--i~-----~~~~lv~i~  215 (430)
                      | +|++..+++.+... ......| +             ++.++...+ .+.+..+|+++|+  ++     +++++|++.
T Consensus       129 ~-~vi~~~p~y~~~~~-~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~  206 (426)
T 1sff_A          129 S-GTIAFSGAYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIE  206 (426)
T ss_dssp             C-EEEEETTCCCCSSH-HHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEEC
T ss_pred             C-eEEEECCCcCCCch-HhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEe
Confidence            6 77776666544321 1112223 2             344554310 0001124667776  43     567888775


Q ss_pred             ecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c--ccccc--ccEEEeCCCccccCCc--cEEEEEcH
Q 043610          216 ANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P--VDVTR--FGVIYAGAQKNVGPSG--VTIVIVRK  279 (430)
Q Consensus       216 ~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~--idl~~--~d~~~~s~~K~~gp~G--~g~l~v~~  279 (430)
                      .+.+.||...+      +|.++ +++|+++++|++|+ ++..  .  ++...  .|++  +++|++|+ |  +|++++++
T Consensus       207 p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-GlriG~~~~~~  283 (426)
T 1sff_A          207 PVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-GFPLAGVTGRA  283 (426)
T ss_dssp             SBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-SSCCEEEEEEH
T ss_pred             cccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-CCceEEEEEcH
Confidence            54444995544      34554 58999999999988 4321  1  22222  2444  77899998 8  69999999


Q ss_pred             HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-CceecCC
Q 043610          280 DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYKCPV  358 (430)
Q Consensus       280 ~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~~~~  358 (430)
                      ++++.+.+..           .. ...+.|...+.++.++|+++.+ +   ...++.+++++++++.|.+.. .+..+..
T Consensus       284 ~~~~~l~~~~-----------~~-~~~~~~~~~~~a~~aal~~~~~-~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  347 (426)
T 1sff_A          284 EVMDAVAPGG-----------LG-GTYAGNPIACVAALEVLKVFEQ-E---NLLQKANDLGQKLKDGLLAIAEKHPEIGD  347 (426)
T ss_dssp             HHHTTSCTTS-----------BC-CSSSSCHHHHHHHHHHHHHHHH-T---THHHHHHHHHHHHHHHHHHHHHTCTTEEE
T ss_pred             HHHhhhccCC-----------cC-cCCCCCHHHHHHHHHHHHHHHh-c---CHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence            9877653210           01 1135677888888899998764 2   456778888888888887521 0211100


Q ss_pred             CCCCCccceEEEEcCC-------CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          359 EKSVRSFMNVPFTLEK-------SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~-------~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ... .+ ..+.+.+++       .+.+. ++.+.|.++||.+.+|....+++||+++.+++++|+++++++|++++++
T Consensus       348 ~~~-~g-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~  423 (426)
T 1sff_A          348 VRG-LG-AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDE  423 (426)
T ss_dssp             EEE-ET-TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEE-EE-EEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence            011 23 355667631       11223 6888898899998876544568999999889999999999999998764

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.85  E-value=5.6e-20  Score=187.24  Aligned_cols=316  Identities=12%  Similarity=0.071  Sum_probs=200.3

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHh-CCC-----CCcEEEE--EeCcH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL-NIP-----QEYSVLF--LQGGA  143 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~-g~~-----~~~~vv~--~~~ga  143 (430)
                      |++..++.++.+.|.+++.+...+ ...+...|.. ..+      ..++|+.+++++ |.+     ++ +|++  + +|+
T Consensus        59 ~~d~~~~~~v~~av~~a~~~~~~~-~~~~~~~Y~~-~~G------~~~lr~~ia~~l~g~~~~~~~~~-~i~~~~t-~gg  128 (448)
T 3meb_A           59 YRDESGKPWILPAVKEAEAIISSD-LSKYNKEYPP-VAG------FPLFLEAAQFLMFGKDSKAAQEG-RIASCQS-LSG  128 (448)
T ss_dssp             CCCTTSCCCCCHHHHHHHHHHHHC-TTTTCCSCCC-TTC------CHHHHHHHHHHHHCTTCHHHHTT-CEEEEEE-SHH
T ss_pred             ccCCCCCEechHHHHHHHHHHhhc-ccCCCCCCCC-Ccc------hHHHHHHHHHHhcCCCccccCcC-cEEEEEC-CcH
Confidence            344456667788888886654310 0011111111 011      236667777776 876     44 6766  5 789


Q ss_pred             HHHHHH--HHhhcCCCCCcEEEEeCChhHHHHHHHHH----HhC-CceEEecCCCCcC-CCCCCccccc--cC---CCcc
Q 043610          144 TTQFAA--VPLNLCTPNDPVDYIVTGSWGDKAFKEAQ----KFC-NPQVIWSGKAEKY-TKIPNFDALE--QN---PDAK  210 (430)
Q Consensus       144 T~a~~~--~~~sl~~~gd~vl~~~~g~~~~~~~~~a~----~~g-~~~~v~~~~~~~~-g~~~d~~~l~--i~---~~~~  210 (430)
                      |++++.  .+.+++.+||+|++..+++.++.  ..++    ..| +++.++..++  . +..+|+++++  ++   ++++
T Consensus       129 t~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~--~~~~~~~~~~G~~v~~~~~~~~--~~~~~~d~e~l~~~l~~~~~~~~  204 (448)
T 3meb_A          129 TGSLHIGFEFLHLWMPKAEFYMPSTTWPNHY--GIYDKVFNKLKVPYKEYTYLRK--DGELEIDFSNTKKDIQSAPEKSI  204 (448)
T ss_dssp             HHHHHHHHHHHHHHCTTCCEEEESSCCTHHH--HHHHHHHCTTTSCCEEECCBCT--TSCSSBCHHHHHHHHHHSCTTCE
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCHhHH--HHHHhhHHhCCCeEEEEecccc--ccCCCcCHHHHHHHHHhCCCCcE
Confidence            999987  45566789999998887776653  3455    677 8888877332  2 2357888886  43   4688


Q ss_pred             EEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCc-CCCCccc-----ccc-----cc-EEEeCCCccccCCc-
Q 043610          211 YLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSN-FCSKPVD-----VTR-----FG-VIYAGAQKNVGPSG-  271 (430)
Q Consensus       211 lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~~id-----l~~-----~d-~~~~s~~K~~gp~G-  271 (430)
                      ++++++++||||..++  +   |.++ +++|+++++|+++. ++..+.+     +..     .+ +++.|++|.+|++| 
T Consensus       205 ~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~  284 (448)
T 3meb_A          205 FLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGE  284 (448)
T ss_dssp             EEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG
T ss_pred             EEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccc
Confidence            8999999999999999  4   5554 58899999999865 4433211     111     12 67899999999889 


Q ss_pred             -cEEE--EE--------c-H----HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHH--H--hcCHHH
Q 043610          272 -VTIV--IV--------R-K----DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLL--E--LGGLNE  331 (430)
Q Consensus       272 -~g~l--~v--------~-~----~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~--~--~~g~~~  331 (430)
                       +|++  ++        . +    ++++.+..          ..  .....+++..++.++..+|+...  +  ...++.
T Consensus       285 RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~----------~~--~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~  352 (448)
T 3meb_A          285 RIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL----------QI--RKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKE  352 (448)
T ss_dssp             CCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH----------HH--HTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred             cceeeeeeeccccccccCCHHHHHHHHHHHHH----------HH--hcccCCccHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence             7887  55        3 3    33322110          00  11224567777777777764311  0  013678


Q ss_pred             HHHHHHHHHHHHHHHHHcc--CC------ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCee
Q 043610          332 VEKMNRKKAELLYNVIDGS--NG------FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGM  402 (430)
Q Consensus       332 v~~~~~~l~~~l~~~l~~~--~G------~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~i  402 (430)
                      ++++++++++++++.|.+.  .|      +....   +. . +.+.+  .+  .+.+++..| .++||.+.+|.     .
T Consensus       353 ~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~---~~-~-g~~~~--~~--~~~~~~~~ll~~~gV~v~~G~-----g  418 (448)
T 3meb_A          353 MSARIHRMRSLLHASLAKRKTPGPGSKGTWDHIL---TA-I-GMFTF--TG--LTPEHVDYLKEKWSIYLVKAG-----G  418 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHH---HC-C-SSEEE--CC--CCHHHHHHHHHHHCEEECSGG-----G
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCCcCcccccceeC---CC-c-eEEEe--cC--CCHHHHHHHHHhCCEEEeCCC-----c
Confidence            8899999999999999873  12      22211   11 1 12222  22  234566665 67799998764     4


Q ss_pred             EEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          403 RASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       403 Ris~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      |||+... ++++|++++++|++++++
T Consensus       419 Ris~a~~-~~~~i~~~~~~l~~~l~~  443 (448)
T 3meb_A          419 RMSMCGL-TESNCDYVAEAIHDAVTK  443 (448)
T ss_dssp             EEEGGGC-CTTTHHHHHHHHHHHHHH
T ss_pred             EEEEecC-CHHHHHHHHHHHHHHHHh
Confidence            9999754 456699999999998875

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.84  E-value=2.9e-19  Score=177.97  Aligned_cols=318  Identities=10%  Similarity=-0.004  Sum_probs=199.4

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHH-HHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CC
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDL-RALLNIPQEYSVLFLQGGATTQFAAVPLNL-CT  156 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~l-a~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~  156 (430)
                      .+.++.+++++.+.+..    |.    ...+++    ..+++++.+ ++++|..+  +++++ +|+|+|++.++.++ ++
T Consensus        12 ~~~~~~i~~a~~~~~~~----~~----~~~~~~----~~~~l~~~~~a~~~g~~~--~~v~~-~sgt~al~~al~~l~~~   76 (377)
T 3ju7_A           12 TVPVIEYLDELKEIDAS----HI----YTNYGP----INQRFEQTIMSGFFQNRG--AVTTV-ANATLGLMAAIQLKKRK   76 (377)
T ss_dssp             CCCGGGGHHHHHHHHHH----TC----CSSSCH----HHHHHHHHHHHHTSTTCS--EEEEE-SCHHHHHHHHHHHHSCT
T ss_pred             CCCcHHHHHHHHHHHHc----CC----cccCCH----HHHHHHHHHHHHHhCCCC--eEEEe-CCHHHHHHHHHHHcCCC
Confidence            45677888888887753    11    111122    355888999 99999432  56665 78999999999998 79


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCC--ccEEEEeecCCCccccCC--CC
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPD--AKYLHICANETIHGVEFK--EY  228 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~--~~lv~i~~~~t~tG~~~p--ei  228 (430)
                      |||+|++....+.+..  ..++..| +++.++...+   +..+|+++++  + +++  |++|+.   .+++|...|  +|
T Consensus        77 ~Gd~Vi~~~~~~~~~~--~~~~~~G~~~~~v~~~~~---~~~~d~~~l~~~i~~~~~~tk~v~~---~~~~G~~~~~~~i  148 (377)
T 3ju7_A           77 KGKYALMPSFTFPATP--LAAIWCGLEPYFIDISID---DWYMDKTVLWDKIEELKEEVAIVVP---YATFGSWMNLEEY  148 (377)
T ss_dssp             TCCEEEEESSSCTHHH--HHHHHTTCEEEEECBCTT---TCSBCHHHHHHHHHHHGGGEEEECC---BCGGGBCCCCHHH
T ss_pred             CcCEEEECCCCcHHHH--HHHHHcCCEEEEEecCCc---cCCcCHHHHHHHHhcCCCCceEEEE---ECCCCCccCHHHH
Confidence            9999998887776642  3456678 8878877431   2257888887  5 566  888874   457899998  78


Q ss_pred             ccc-cCCCcEEEEeccCcCCCCc--ccc----ccccEEEeCCCccccCCccEEEEEc-HHHHhccCCCCCccc--cccch
Q 043610          229 PSA-KNSTGILVADMSSNFCSKP--VDV----TRFGVIYAGAQKNVGPSGVTIVIVR-KDLLGNAQDKTPLML--DYKIH  298 (430)
Q Consensus       229 ~~~-~~~g~~lvvD~a~s~G~~~--idl----~~~d~~~~s~~K~~gp~G~g~l~v~-~~~~~~~~~~~p~~~--~~~~~  298 (430)
                      .++ + +|+++++|++|++|...  ..+    .+++++.++.+|++++...|+++.+ +++.++++.....-.  .+ ..
T Consensus       149 ~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~-~~  226 (377)
T 3ju7_A          149 EELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNR-EC  226 (377)
T ss_dssp             HHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTS-CB
T ss_pred             HHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCC-ce
Confidence            886 7 99999999999999752  112    2334566668999975224666664 455554322110000  00 00


Q ss_pred             hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec-CCCCCCCccc-eEEEEcCCCc
Q 043610          299 DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC-PVEKSVRSFM-NVPFTLEKSD  376 (430)
Q Consensus       299 ~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~-~~~~~~rs~~-iv~f~~~~~~  376 (430)
                      ...+..++..+.....    ++..+.   .++...++.+++++++.+.|.+..++.+. .......+.. .+++.+++..
T Consensus       227 ~~~g~~~~~~~~~aa~----~~~~l~---~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (377)
T 3ju7_A          227 TMMGFNCKMSEYAAAI----GIATMK---KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV  299 (377)
T ss_dssp             CSSCCBCCCCHHHHHH----HHHHHH---THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS
T ss_pred             eeccccCCCCHHHHHH----HHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh
Confidence            1112122233332211    222222   56788889999999999999874433221 1122222222 2456666421


Q ss_pred             hhHHHHHHHHHcCCeecCCCC---------------C--------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          377 LEAEFVKEAAKEKMVQLKGHR---------------S--------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       377 ~~~~~~~~L~~~Gi~~~~g~~---------------~--------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...++.+.|.++||.+..++.               .        ...||++++..+|++|++++++.|++++.+
T Consensus       300 ~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~  374 (377)
T 3ju7_A          300 RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS  374 (377)
T ss_dssp             CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred             hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence            133799999999998644320               0        136999999999999999999999987653

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.84  E-value=1.6e-19  Score=180.26  Aligned_cols=321  Identities=12%  Similarity=0.065  Sum_probs=198.9

Q ss_pred             CCCceeecCC--CCC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAG--PAN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~g--p~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.++|..+  ..+   .++.|++++.+.+.+... +.+     ...   ....+++++.+++++|.  + +++++ +|
T Consensus        35 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~-----~~~---~~~~~~l~~~la~~~~~--~-~v~~~-~g  101 (395)
T 3nx3_A           35 AKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLH-TSN-----LYY---NENIAAAAKNLAKASAL--E-RVFFT-NS  101 (395)
T ss_dssp             CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSC-CCT-----TSB---CHHHHHHHHHHHHHHTC--S-EEEEE-SS
T ss_pred             CCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccc-ccc-----ccC---CHHHHHHHHHHHHhcCC--C-eEEEe-CC
Confidence            3445556655  222   479999999998864211 111     111   23456888899999983  3 77775 78


Q ss_pred             HHHHHHHHHhhcC-------CCCCcEEEEeCChhHHHHHHHHHHhC-CceE----EecCCCCcCCCCCCccccc--cCCC
Q 043610          143 ATTQFAAVPLNLC-------TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQV----IWSGKAEKYTKIPNFDALE--QNPD  208 (430)
Q Consensus       143 aT~a~~~~~~sl~-------~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~----v~~~~~~~~g~~~d~~~l~--i~~~  208 (430)
                      ++++++.++..+.       .++|+|++....+.+...  .+...+ ...+    .+...+...-...|+++|+  ++++
T Consensus       102 g~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~  179 (395)
T 3nx3_A          102 GTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTL--GALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEK  179 (395)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSH--HHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTT
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCH--HHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCC
Confidence            9999999877653       357888877766544321  111111 0000    0000000000013567776  6788


Q ss_pred             ccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCcccc-CCccE
Q 043610          209 AKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQKNVG-PSGVT  273 (430)
Q Consensus       209 ~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K~~g-p~G~g  273 (430)
                      +++|++..+++++|.+.+      +|.++ +++|+++++|++|+ +|..  ....+.+    |++  +++|.+| ..++|
T Consensus       180 ~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G~~~G  257 (395)
T 3nx3_A          180 TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIM--TSAKALGCGLSVG  257 (395)
T ss_dssp             EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGTTTSCCE
T ss_pred             eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEE--EecccccCCCceE
Confidence            999999988999999866      34444 58999999999987 6532  1222222    444  4569995 34589


Q ss_pred             EEEEcHHH-HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc--
Q 043610          274 IVIVRKDL-LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS--  350 (430)
Q Consensus       274 ~l~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~--  350 (430)
                      ++++++++ ++.+.+..   .        + ...+.|...+.++.++|+.+.++    ...++.+++.+++++.|.+.  
T Consensus       258 ~~~~~~~~~~~~~~~~~---~--------~-~~~~~~~~~~~aa~aal~~~~~~----~~~~~~~~~~~~~~~~l~~~~~  321 (395)
T 3nx3_A          258 AFVINQKVASNSLEAGD---H--------G-STYGGNPLVCAGVNAVFEIFKEE----KILENVNKLTPYLEQSLDELIN  321 (395)
T ss_dssp             EEEECHHHHHHHSCTTC---C--------S-SCBSCCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEchhhhhhhcCCcc---c--------C-CCCCCCHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998 77653310   0        0 11245777888888889876532    34445555555555555431  


Q ss_pred             --CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          351 --NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       351 --~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                        ..+....     .....+.+.+++.....++.+.|.++||.+.++.  .+.+||++...++++|+++++++|++++++
T Consensus       322 ~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  394 (395)
T 3nx3_A          322 EFDFCKKRK-----GLGFMQGLSLDKSVKVAKVIQKCQENALLLISCG--ENDLRFLPPLILQKEHIDEMSEKLRKALKS  394 (395)
T ss_dssp             HCTTEEEEE-----EETTEEEEEECTTSCHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             hCCCeEEEE-----eEEEEEEEEeCCcchHHHHHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence              2222111     1123566777652223378899999999987642  458999999999999999999999998864

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.84  E-value=1.2e-19  Score=188.92  Aligned_cols=340  Identities=12%  Similarity=0.059  Sum_probs=204.4

Q ss_pred             ceeecCCC-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--CC--CCcEEEEEeCcHHH
Q 043610           71 VFNFAAGP-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IP--QEYSVLFLQGGATT  145 (430)
Q Consensus        71 ~~l~~~gp-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--~~--~~~~vv~~~~gaT~  145 (430)
                      +++++.|. ...++.+++++.+.+...   +..   ....  ...+..+.+.+.+++.++  .+  ++.+|+++ +|+|+
T Consensus       105 ~i~l~~g~~~~~~~~~v~a~~~~~~~~---~y~---~~~~--g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t-~G~t~  175 (533)
T 3f6t_A          105 AVNYCHTELGLNRDKVVAEWVNGAVAN---NYP---VPDR--CLVNTEKIINYFLQELSYKDANLAEQTDLFPT-EGGTA  175 (533)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHHHTC---SCC---SSSS--CCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEE-EHHHH
T ss_pred             heeccCCCCCcCCcHHHHHHHHHHHhC---CCC---CCcc--cHHHHHHHHHHHHHHhcCCCCCCCCcceEEEE-CCHHH
Confidence            45555433 334678888877776431   110   0111  112233344444544422  22  11267765 78999


Q ss_pred             HHHHHHhh-----cCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          146 QFAAVPLN-----LCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       146 a~~~~~~s-----l~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      ++..++.+     ++++||+|++..+.+.++.  ..++..| +++.++...+.+.+..+|+++|+  +++++++|+++++
T Consensus       176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p  253 (533)
T 3f6t_A          176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYL--RIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNP  253 (533)
T ss_dssp             HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH--TSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESS
T ss_pred             HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH--HHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCC
Confidence            99999887     7799999998877766542  3344456 77777764311122346888887  7889999999999


Q ss_pred             CCCccccCC--CC---ccc-c-CCCcEEEEeccCcCCCC-cccc----ccccEEEeCCCccccCCc--cEEEEEcHH---
Q 043610          218 ETIHGVEFK--EY---PSA-K-NSTGILVADMSSNFCSK-PVDV----TRFGVIYAGAQKNVGPSG--VTIVIVRKD---  280 (430)
Q Consensus       218 ~t~tG~~~p--ei---~~~-~-~~g~~lvvD~a~s~G~~-~idl----~~~d~~~~s~~K~~gp~G--~g~l~v~~~---  280 (430)
                      +||||.+++  ++   .++ + ++|+++++|++|+.... ...+    .+..+++.|++|.+|++|  +|+++++++   
T Consensus       254 ~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~  333 (533)
T 3f6t_A          254 TNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVF  333 (533)
T ss_dssp             CTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSCHH
T ss_pred             CCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECcHHHH
Confidence            999999999  34   443 4 68999999999762221 1122    122489999999999889  899999876   


Q ss_pred             --HHhccCC--------------CCCcccccc----chhh--cCCCCCCccHHHHHHHHH-HHHHHH-------HhcCHH
Q 043610          281 --LLGNAQD--------------KTPLMLDYK----IHDE--NNSLYNTPPCYCIYMCGL-VFEYLL-------ELGGLN  330 (430)
Q Consensus       281 --~~~~~~~--------------~~p~~~~~~----~~~~--~~~~~~T~~~~~~~a~~~-al~~l~-------~~~g~~  330 (430)
                        +++.+.+              ..|.-+.+-    ....  ......+++.+.+.++.. ++..+.       ....++
T Consensus       334 ~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~  413 (533)
T 3f6t_A          334 DDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYID  413 (533)
T ss_dssp             HHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHH
T ss_pred             HHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHH
Confidence              5443210              011000000    0000  111224556666665332 233332       012367


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC------C----------chhHHHHHHH-HHcCCeec
Q 043610          331 EVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK------S----------DLEAEFVKEA-AKEKMVQL  393 (430)
Q Consensus       331 ~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~------~----------~~~~~~~~~L-~~~Gi~~~  393 (430)
                      .++++++++++.+++.|.  .++....  +  .+...+.+.++.      .          ..+.+++.+| +++||.+.
T Consensus       414 ~~~~~~~~r~~~l~~~L~--~~~~~~~--~--~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~  487 (533)
T 3f6t_A          414 IARKLVSERYDQLHDAMQ--APKDETD--T--NTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLV  487 (533)
T ss_dssp             HHHHHHHHHHHHHHHHHT--CCCCCST--T--BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSC
T ss_pred             HHHHHHHHHHHHHHHhcC--CCccccC--C--CceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEe
Confidence            788899999999999996  4554332  1  222223344431      0          0122566555 57799988


Q ss_pred             CCCC---CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          394 KGHR---SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       394 ~g~~---~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +|..   ..+++|||+.. .++++++++++.|++++++
T Consensus       488 pg~~f~~~~~~iRls~a~-~~~e~i~~~i~~L~~~l~~  524 (533)
T 3f6t_A          488 DGVGFGAKPGELRVSQAN-LPTEDYALIGKQVLELLKE  524 (533)
T ss_dssp             TTEEECSSTTEEEEESSS-SCHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCCEEEEEEee-CCHHHHHHHHHHHHHHHHH
Confidence            7642   25689999864 5789999999999988764

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.84  E-value=2.8e-19  Score=178.71  Aligned_cols=274  Identities=11%  Similarity=0.048  Sum_probs=181.7

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   +++++ +||++|+..++.+++++||+|++..+.|.+..  +...++..| +++.++.   
T Consensus        59 ~~~~~l~~~la~~~g~~---~~i~~-~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~---  131 (389)
T 3acz_A           59 PTVEQFEEMVCSIEGAA---GSAAF-GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT---  131 (389)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT---
T ss_pred             hHHHHHHHHHHHHhCCC---eEEEe-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC---
Confidence            34568899999999986   45565 57889999999998899999998877665532  222255667 6655543   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~  264 (430)
                            .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+.  .++++ ..|+++.|++
T Consensus       132 ------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~-~~di~~~S~s  204 (389)
T 3acz_A          132 ------SDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLEL-GADIALHSVS  204 (389)
T ss_dssp             ------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGT-TCSEEEEETT
T ss_pred             ------CCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCcccc-CCeEEEECCh
Confidence                  3567776  7889999999999999999999  78886 68899999999998665  45553 3489999999


Q ss_pred             cccc-CCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          265 KNVG-PSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       265 K~~g-p~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      |++| |.+  .|++++++ ++++.+.+    +..        ...++.+....+++..+++      .++...++..+.+
T Consensus       205 K~~~~~~~~~~G~v~~~~~~~~~~l~~----~~~--------~~g~~~~~~~~~~~~~~l~------~l~~r~~~~~~~~  266 (389)
T 3acz_A          205 KYINGHGDVIGGVSSAKTAEDIATIKF----YRK--------DAGSLMAPMDAFLCARGMK------TLPIRMQIHMENG  266 (389)
T ss_dssp             TTTTCSSCCCCEEEEESSHHHHHHHHH----HHH--------HHCCCCCHHHHHHHHHHHT------THHHHHHHHHHHH
T ss_pred             hhccCCCCceeEEEEECcHHHHHHHHH----HHH--------hcCCCCCHHHHHHHHcCcc------HHHHHHHHHHHHH
Confidence            9996 655  49999998 87765422    000        0112344444444444443      2344455556666


Q ss_pred             HHHHHHHHccCCcee--cC-CC--CC--------CCccceEEEEcCCCchhHHHHHHHHHcCCeecC---C------C--
Q 043610          341 ELLYNVIDGSNGFYK--CP-VE--KS--------VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK---G------H--  396 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~--~~-~~--~~--------~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g------~--  396 (430)
                      ..+.+.+++...+.-  .+ ..  +.        .....+++|.+++   ..++.+.|.+.|+....   |      .  
T Consensus       267 ~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~  343 (389)
T 3acz_A          267 LKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---FEAAKKLMEHLKVCTLAVSLGCVDTLIEHP  343 (389)
T ss_dssp             HHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---HHHHHHHHTTCSSSEEBSCCCCSSCEEECT
T ss_pred             HHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---HHHHHHHHHhCCCcEECcCCCCcccEeeCC
Confidence            677777765322111  11 00  00        0123467888863   23456666677876533   2      0  


Q ss_pred             -----------------CCCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          397 -----------------RSVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       397 -----------------~~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                                       ...+.||+|++..++++.++.+.++|+
T Consensus       344 ~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~  387 (389)
T 3acz_A          344 ASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALE  387 (389)
T ss_dssp             TTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHT
T ss_pred             cccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHh
Confidence                             013579999998766666777666654

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.84  E-value=1.8e-19  Score=183.05  Aligned_cols=317  Identities=12%  Similarity=0.077  Sum_probs=205.0

Q ss_pred             CCCCceeecCCC--CC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGP--AN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp--~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..+..++|..|.  .+   .++.|++++.+.+.+... ....     ..   .+..+++++.|++++|.  + +++++ +
T Consensus        74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~-~~~~-----~~---~~~~~~l~~~la~~~g~--~-~v~~~-~  140 (439)
T 2oat_A           74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTL-TSRA-----FY---NNVLGEYEEYITKLFNY--H-KVLPM-N  140 (439)
T ss_dssp             TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSC-CCTT-----SE---ESSHHHHHHHHHHHHTC--S-EEEEE-S
T ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCc-ccCc-----cC---CHHHHHHHHHHHHhcCC--C-EEEEe-C
Confidence            344456666643  23   689999999998865321 1100     11   12345777888888874  3 67775 7


Q ss_pred             cHHHHHHHHHhhcC---------CCC-CcEEEEeCChhHHHHHHHHHHhCC-----------ceEEecCCCCcCCCCCCc
Q 043610          142 GATTQFAAVPLNLC---------TPN-DPVDYIVTGSWGDKAFKEAQKFCN-----------PQVIWSGKAEKYTKIPNF  200 (430)
Q Consensus       142 gaT~a~~~~~~sl~---------~~g-d~vl~~~~g~~~~~~~~~a~~~g~-----------~~~v~~~~~~~~g~~~d~  200 (430)
                      |+++|++.++..+.         .+| |+|++.+.++.+... ......|.           ..++...    +   .|+
T Consensus       141 sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~-~~~~~~g~~~~~~~~~p~~~~v~~~~----~---~d~  212 (439)
T 2oat_A          141 TGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTL-SAISSSTDPTSYDGFGPFMPGFDIIP----Y---NDL  212 (439)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSH-HHHTTCCCHHHHTTSCSCCTTEEEEC----S---SCH
T ss_pred             CHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCH-hHhhcCCChhcccCCCCCCCCeEEeC----C---CCH
Confidence            89999998887653         356 788887766544311 11111111           1112111    1   366


Q ss_pred             cccc--c-CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC--Ccc--cccc--ccEEEeCC
Q 043610          201 DALE--Q-NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS--KPV--DVTR--FGVIYAGA  263 (430)
Q Consensus       201 ~~l~--i-~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~--~~i--dl~~--~d~~~~s~  263 (430)
                      ++++  + .+++++|++..+++++|.+.+      +|.++ +++|+++++|++|. +|.  ..+  +...  .|++  ++
T Consensus       213 ~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~  290 (439)
T 2oat_A          213 PALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LL  290 (439)
T ss_dssp             HHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EE
T ss_pred             HHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--Ee
Confidence            7776  6 467888888777788998763      45554 58999999999985 442  111  2222  2555  77


Q ss_pred             CccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043610          264 QKNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKA  340 (430)
Q Consensus       264 ~K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~  340 (430)
                      +|++|. |   +|++++++++++.+.+.   .        .+.+ ++.|...+.++.++|+.+.+    +.+.++.++++
T Consensus       291 sK~l~~-G~~~~G~v~~~~~~~~~l~~~---~--------~~~t-~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~  353 (439)
T 2oat_A          291 GKALSG-GLYPVSAVLCDDDIMLTIKPG---E--------HGST-YGGNPLGCRVAIAALEVLEE----ENLAENADKLG  353 (439)
T ss_dssp             CGGGGT-TSSCCEEEEECHHHHTTSCTT---S--------SCCS-STTCHHHHHHHHHHHHHHHH----TTHHHHHHHHH
T ss_pred             cccccC-CCCCeEEEEECHHHHhccCCC---C--------cccC-CCcCHHHHHHHHHHHHHHhh----hhHHHHHHHHH
Confidence            899974 5   89999999987764321   0        1112 24566777888889987764    25678889999


Q ss_pred             HHHHHHHHccCCceecCCCCCCCccceEEEEcCCC--chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610          341 ELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS--DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       341 ~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~--~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l  418 (430)
                      +++++.|++ .++.++. .....+ ..+.+.+++.  ....++.+.|.++||.+.++.  .+.+|+++...++++|++++
T Consensus       354 ~~l~~~L~~-l~~~~~~-~~~~~g-~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~  428 (439)
T 2oat_A          354 IILRNELMK-LPSDVVT-AVRGKG-LLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTH--GDIIRFAPPLVIKEDELRES  428 (439)
T ss_dssp             HHHHHHHTT-SCTTTEE-EEEEET-TEEEEEECCCSSCCHHHHHHHHHHTTEECCBSS--SSEEEECCCTTCCHHHHHHH
T ss_pred             HHHHHHHHH-hcCCCcE-EEEeee-eEEEEEEecCccHHHHHHHHHHHHCCeEEecCC--CCEEEEECccCCCHHHHHHH
Confidence            999999986 4543211 111122 3456777642  112379999999999987632  35799999888999999999


Q ss_pred             HHHHHHHHHh
Q 043610          419 VAFMKDFQAK  428 (430)
Q Consensus       419 l~~L~~~~~~  428 (430)
                      ++.|++++++
T Consensus       429 l~~l~~~l~~  438 (439)
T 2oat_A          429 IEIINKTILS  438 (439)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999998764

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.83  E-value=5.5e-20  Score=187.66  Aligned_cols=289  Identities=11%  Similarity=0.033  Sum_probs=186.3

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC----CCCc---EEEEeCChhHHHHHHHHHHhC-CceEEec
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT----PNDP---VDYIVTGSWGDKAFKEAQKFC-NPQVIWS  188 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~----~gd~---vl~~~~g~~~~~~~~~a~~~g-~~~~v~~  188 (430)
                      ..++++.++++++.+   +++++ +|+|+|++.++..+..    +||+   |++. ..+|+. +....+..| +++.+..
T Consensus        78 ~~~l~~~la~~~~~~---~v~~t-~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~-~~~~~~-~~~~~~~~g~~~~~~~~  151 (467)
T 1ax4_A           78 YYDLKDKAKELFNYD---YIIPA-HQGRGAENILFPVLLKYKQKEGKAKNPVFIS-NFHFDT-TAAHVELNGCKAINIVT  151 (467)
T ss_dssp             HHHHHHHHHHHHCCC---EEEEE-SSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE-SSCCHH-HHHHHHHTTCEEEECBC
T ss_pred             HHHHHHHHHHHcCCC---cEEEc-CCcHHHHHHHHHHHHHhhccCCCccceEEEe-ccccch-hhHHHhccCCceecccc
Confidence            457789999999873   67775 7899999999998877    9998   8765 555543 222344456 5444432


Q ss_pred             CC--C----CcCCCCCCccccc--cC----CCccEEEEeecCCCc-cccCC-----CCccc-cCCCcEEEEeccCcC---
Q 043610          189 GK--A----EKYTKIPNFDALE--QN----PDAKYLHICANETIH-GVEFK-----EYPSA-KNSTGILVADMSSNF---  246 (430)
Q Consensus       189 ~~--~----~~~g~~~d~~~l~--i~----~~~~lv~i~~~~t~t-G~~~p-----ei~~~-~~~g~~lvvD~a~s~---  246 (430)
                      ..  +    .++...+|+++|+  ++    +++++|++++++|++ |.+.+     +|.++ +++|+++++|+++.+   
T Consensus       152 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~  231 (467)
T 1ax4_A          152 EKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENA  231 (467)
T ss_dssp             GGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH
T ss_pred             cccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcc
Confidence            11  0    0122246788887  54    379999999999999 88877     35554 689999999998765   


Q ss_pred             --------CCCcccc--------ccccEEEeCCCccccCC-ccEEEEEc-H-HHHhccCCCCCccccccchhhcCCCCCC
Q 043610          247 --------CSKPVDV--------TRFGVIYAGAQKNVGPS-GVTIVIVR-K-DLLGNAQDKTPLMLDYKIHDENNSLYNT  307 (430)
Q Consensus       247 --------G~~~idl--------~~~d~~~~s~~K~~gp~-G~g~l~v~-~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T  307 (430)
                              +...+++        ...|++++|+||++|++ | |+++.+ + ++++.+....+.+       .....+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-------~~~~~~~~  303 (467)
T 1ax4_A          232 YFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-------EGFVTYGG  303 (467)
T ss_dssp             HHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-------TCSTTTTT
T ss_pred             hhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-------ccccccCC
Confidence                    3333332        22478889999999854 6 777777 6 6766532110000       01122345


Q ss_pred             ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE-------cCCCchhH-
Q 043610          308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT-------LEKSDLEA-  379 (430)
Q Consensus       308 ~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~-------~~~~~~~~-  379 (430)
                      .+...+.++..+++.+.   . ++..++..++++++++.|.+ .|+.+..  + .++ ..+.+.       +++.+.+. 
T Consensus       304 ~~~~~~~a~~~~l~~~~---~-~~~~~~~~~~~~~l~~~L~~-~~~~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~  374 (467)
T 1ax4_A          304 LAGRDMAAMVQGLEEGT---E-EEYLHYRIGQVKYLGDRLRE-AGIPIQY--P-TGG-HAVFVDCKKLVPQIPGDQFPAQ  374 (467)
T ss_dssp             CCHHHHHHHHHHHHHTT---C-HHHHHHHHHHHHHHHHHHHH-TTCCBCS--S-CCS-SEEEEESTTTCTTSCGGGCHHH
T ss_pred             ccchHHHHHHHHHHHhh---h-hhHHHHHHHHHHHHHHHHHh-CCCCccc--C-CCc-eEEEEehhhhccccccCCCCHH
Confidence            56655565555665432   1 22333444667888999986 6776542  1 233 234455       33212223 


Q ss_pred             HHHHHH-HHcCCeecC-CC---------C-----CCCeeEEeecCC-CCHHHHHHHHHHHHHHHHh
Q 043610          380 EFVKEA-AKEKMVQLK-GH---------R-----SVGGMRASIYNA-MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       380 ~~~~~L-~~~Gi~~~~-g~---------~-----~~g~iRis~~~~-~t~edv~~ll~~L~~~~~~  428 (430)
                      ++.+.| .++||.+.+ |.         .     ..+.+|||+..+ +|++|++++++.|++++++
T Consensus       375 ~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~  440 (467)
T 1ax4_A          375 AVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK  440 (467)
T ss_dssp             HHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred             HHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence            688888 888998765 31         1     125799999854 8999999999999987654

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.82  E-value=2e-18  Score=174.99  Aligned_cols=317  Identities=12%  Similarity=0.079  Sum_probs=199.3

Q ss_pred             CCCceeecCC----CCC-CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAG----PAN-LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~g----p~~-~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .+..++|..|    +.. .++.|++++.+.+.+... . +   .. ..   .+...++++.|++++|.  + +++++ +|
T Consensus        64 G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~-~-~---~~-~~---~~~~~~l~~~la~~~g~--~-~v~~~-~s  130 (433)
T 1z7d_A           64 DKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI-C-S---RA-FF---SVPLGICERYLTNLLGY--D-KVLMM-NT  130 (433)
T ss_dssp             CCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSC-C-C---TT-SE---EHHHHHHHHHHHHHHTC--S-EEEEE-SS
T ss_pred             CCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCC-c-c---CC-cC---CHHHHHHHHHHHhhcCC--C-eEEEe-CC
Confidence            3445555553    323 789999999998865321 1 1   01 11   13455778889999984  3 77775 78


Q ss_pred             HHHHHHHHHhhcC---------CCC-CcEEEEeCChhHHHHHHHHHHhCC-----------ceEEecCCCCcCCCCCCcc
Q 043610          143 ATTQFAAVPLNLC---------TPN-DPVDYIVTGSWGDKAFKEAQKFCN-----------PQVIWSGKAEKYTKIPNFD  201 (430)
Q Consensus       143 aT~a~~~~~~sl~---------~~g-d~vl~~~~g~~~~~~~~~a~~~g~-----------~~~v~~~~~~~~g~~~d~~  201 (430)
                      +++|++.++..+.         .+| |+|++.+..+.+... ......|.           ..++..    ++   .|++
T Consensus       131 GseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~-~~~~~~g~~~~~~~~~p~~~~v~~~----~~---~d~~  202 (433)
T 1z7d_A          131 GAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTL-GCISASTTKKCTSNFGPFAPQFSKV----PY---DDLE  202 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------CEEEE----CT---TCHH
T ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcch-hhhcccCCccccccCCCCCCCeEEe----CC---CCHH
Confidence            9999998877642         467 888877766544321 11111111           111111    01   3667


Q ss_pred             ccc--c-CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccc--c--ccEEEeCCC
Q 043610          202 ALE--Q-NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVT--R--FGVIYAGAQ  264 (430)
Q Consensus       202 ~l~--i-~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~--~--~d~~~~s~~  264 (430)
                      +++  + ++++++|++..+++++|++.+      +|.++ +++|+++++|++|+ +|..  .+.++  .  .|++  +++
T Consensus       203 ~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~s  280 (433)
T 1z7d_A          203 ALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLG  280 (433)
T ss_dssp             HHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EEC
T ss_pred             HHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EEC
Confidence            776  6 578888888877788998763      45554 58999999999987 4321  11112  1  2555  677


Q ss_pred             ccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          265 KNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       265 K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      |++| .|   +|++++++++++.+.+.   .        .+.+ ++.|...++++.++|+.+.+    +.+.++.+++++
T Consensus       281 K~l~-~G~~~~G~v~~~~~~~~~l~~~---~--------~~~t-~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~  343 (433)
T 1z7d_A          281 KALS-GGHYPISAVLANDDIMLVIKPG---E--------HGST-YGGNPLAASICVEALNVLIN----EKLCENAEKLGG  343 (433)
T ss_dssp             GGGG-TTSSCCEEEEECHHHHTTCCTT---C--------CCCT-TTTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHH
T ss_pred             cccc-CCCCCeEEEEECHHHHhhhccc---c--------cccc-CCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHH
Confidence            9998 36   89999999987764321   0        1112 25567778888888987763    246778888888


Q ss_pred             HHHHHHHcc-CCceecCCCCCCCccceEEEEcCCC-chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHH
Q 043610          342 LLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLEKS-DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       342 ~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~~~-~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll  419 (430)
                      ++++.|++. .++..+. .....+ ..+.+.+++. ....++.+.|.++||.+.++.  .+.+|+++...++++|+++++
T Consensus       344 ~l~~~L~~l~~~~~~~~-~~~~~g-~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~l  419 (433)
T 1z7d_A          344 PFLENLKRELKDSKIVR-DVRGKG-LLCAIEFKNELVNVLDICLKLKENGLITRDVH--DKTIRLTPPLCITKEQLDECT  419 (433)
T ss_dssp             HHHHHHHHHHTTCTTEE-EEEEET-TEEEEEECTTTCCHHHHHHHHHHTTEECCEET--TTEEEECCCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCeE-EEEeee-eEEEEEEccChhHHHHHHHHHHHCCeEEecCC--CCEEEEECCcCCCHHHHHHHH
Confidence            888888763 1332211 000122 3566777642 112379999999999987642  357999998889999999999


Q ss_pred             HHHHHHHHh
Q 043610          420 AFMKDFQAK  428 (430)
Q Consensus       420 ~~L~~~~~~  428 (430)
                      ++|++++++
T Consensus       420 ~~l~~~l~~  428 (433)
T 1z7d_A          420 EIIVKTVKF  428 (433)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998764

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.82  E-value=4e-19  Score=179.34  Aligned_cols=317  Identities=12%  Similarity=0.072  Sum_probs=203.2

Q ss_pred             CCCceeecCC----C-CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAG----P-ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~g----p-~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .+..++|+.|    + +..++.|++++.+.+.++.. +..     ...   .+..+++++.|++++|.  + +++++ +|
T Consensus        56 g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~-~~~-----~~~---~~~~~~l~~~la~~~g~--~-~v~~~-~g  122 (420)
T 2pb2_A           56 GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWH-TSN-----VFT---NEPALRLGRKLIDATFA--E-RVLFM-NS  122 (420)
T ss_dssp             CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCC-CCT-----TSC---CHHHHHHHHHHHHHSSC--S-EEEEE-SS
T ss_pred             CCEEEEccccccccccCCCCHHHHHHHHHHHHhccc-ccC-----ccC---CHHHHHHHHHHHhhCCC--C-eEEEe-CC
Confidence            3445556554    2 23578999999998865321 111     011   23456888999999984  3 77775 78


Q ss_pred             HHHHHHHHHhhcCC-------CCC-cEEEEeCChhHHHHHHHHHHhC-C-------c---eEEecCCCCcCCCCCCcccc
Q 043610          143 ATTQFAAVPLNLCT-------PND-PVDYIVTGSWGDKAFKEAQKFC-N-------P---QVIWSGKAEKYTKIPNFDAL  203 (430)
Q Consensus       143 aT~a~~~~~~sl~~-------~gd-~vl~~~~g~~~~~~~~~a~~~g-~-------~---~~v~~~~~~~~g~~~d~~~l  203 (430)
                      +++|++.++..+..       +|+ +|++....+.+... ......| .       +   .+....       ..|+++|
T Consensus       123 gteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~-------~~d~~~l  194 (420)
T 2pb2_A          123 GTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSL-FTVSVGGQPKYSDGFGPKPADIIHVP-------FNDLHAV  194 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSH-HHHHHSSCHHHHTTSSSCCSCEEEEC-------TTCHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCH-HHHHhcCCccccccCCCCCCCeEEec-------CCCHHHH
Confidence            99999998887653       674 77777655544211 1111122 1       0   011110       1366777


Q ss_pred             c--cCCCccEEEEeecCCCcccc-CC-----CCccc-cCCCcEEEEeccCc-CCC--Ccc--cccc--ccEEEeCCCccc
Q 043610          204 E--QNPDAKYLHICANETIHGVE-FK-----EYPSA-KNSTGILVADMSSN-FCS--KPV--DVTR--FGVIYAGAQKNV  267 (430)
Q Consensus       204 ~--i~~~~~lv~i~~~~t~tG~~-~p-----ei~~~-~~~g~~lvvD~a~s-~G~--~~i--dl~~--~d~~~~s~~K~~  267 (430)
                      +  +++++++|+++++++++|++ .+     +|.++ +++|+++++|++|. +|.  ..+  +...  .|++  +++|++
T Consensus       195 e~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l  272 (420)
T 2pb2_A          195 KAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKAL  272 (420)
T ss_dssp             HHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGG
T ss_pred             HHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eecccc
Confidence            7  67889999999888888863 44     45554 58999999999986 432  122  2212  2666  467999


Q ss_pred             cCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 043610          268 GPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN  345 (430)
Q Consensus       268 gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~  345 (430)
                      | .|  +|++++++++++.+.+.   .        .+.. .+.|...++++.++|+.+.+    +.+.++.+++++++++
T Consensus       273 ~-~G~~iG~~~~~~~l~~~l~~~---~--------~~~t-~~~~~~~~aa~~a~L~~~~~----~~~~~~~~~~~~~l~~  335 (420)
T 2pb2_A          273 G-GGFPVSAMLTTQEIASAFHVG---S--------HGST-YGGNPLACAVAGAAFDIINT----PEVLQGIHTKRQQFVQ  335 (420)
T ss_dssp             G-TTSCCEEEEECHHHHTTCC---------------CCE-ECCCHHHHHHHHHHHHHHSS----HHHHHHHHHHHHHHHH
T ss_pred             c-CCCceEEEEEhHHHHHhhcCC---C--------cCcc-cCcCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHH
Confidence            7 35  89999999877654320   0        0111 25577778888888887642    5778889999999999


Q ss_pred             HHHccC-CceecCCCCCCCccceEEEEcCCCc--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          346 VIDGSN-GFYKCPVEKSVRSFMNVPFTLEKSD--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       346 ~l~~~~-G~~~~~~~~~~rs~~iv~f~~~~~~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      .|++.. ++..+. .....+ ..+.+.+++..  ...++.+.|.++||.+.++.  .+.+||++...++++|++++++.|
T Consensus       336 ~L~~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~--~~~iRl~~~~~~t~eei~~~~~~l  411 (420)
T 2pb2_A          336 HLQAIDEQFDIFS-DIRGMG-LLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG--ADVMRFAPSLVVEEADIHEGMQRF  411 (420)
T ss_dssp             HHHHHHHHHCCEE-EEEEET-TEEEEEECGGGTTCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCeE-EEEecc-eEEEEEECCCchHHHHHHHHHHHHCCCEEEeCC--CCEEEEECCCCCCHHHHHHHHHHH
Confidence            987631 222211 000122 34566765311  13379999989999987653  357999998889999999999999


Q ss_pred             HHHHHh
Q 043610          423 KDFQAK  428 (430)
Q Consensus       423 ~~~~~~  428 (430)
                      ++++++
T Consensus       412 ~~~l~~  417 (420)
T 2pb2_A          412 AQAVGK  417 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998764

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.82  E-value=2.4e-19  Score=182.28  Aligned_cols=320  Identities=10%  Similarity=-0.022  Sum_probs=202.0

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC----
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT----  156 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~----  156 (430)
                      .++.|++++.+.+.+..   .+.+  .....   +..+++++.|+++++...+ +|+++ +|+++|++.++..+..    
T Consensus        67 ~~~~v~~a~~~~~~~~~---~~~~--~~~~~---~~~~~l~~~la~~~~~~~~-~v~~~-~ggsea~~~al~~~~~~~~~  136 (449)
T 3a8u_X           67 TRKEIQEAVAKQLSTLD---YSPG--FQYGH---PLSFQLAEKITDLTPGNLN-HVFFT-DSGSECALTAVKMVRAYWRL  136 (449)
T ss_dssp             SCHHHHHHHHHHTTTCS---CCCS--SSCCC---HHHHHHHHHHHTTSSTTEE-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhCC---Cccc--cccCC---HHHHHHHHHHHHhCCCCCC-EEEEc-CcHHHHHHHHHHHHHHHHHh
Confidence            38999999999886432   1111  01111   2445788899999987654 66665 8899999998877642    


Q ss_pred             ----CCCcEEEEeCChhHHHHHHHHHHhC-------------CceEEecCCCCcCCC---CCC--------ccccc--cC
Q 043610          157 ----PNDPVDYIVTGSWGDKAFKEAQKFC-------------NPQVIWSGKAEKYTK---IPN--------FDALE--QN  206 (430)
Q Consensus       157 ----~gd~vl~~~~g~~~~~~~~~a~~~g-------------~~~~v~~~~~~~~g~---~~d--------~~~l~--i~  206 (430)
                          +||+|++....+.+.... .....|             .+..++...  .+..   .+|        +++|+  +.
T Consensus       137 ~g~~~~~~vi~~~~~yhg~~~~-~~~~~g~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~d~~~~~~~~~~~le~~l~  213 (449)
T 3a8u_X          137 KGQATKTKMIGRARGYHGVNIA-GTSLGGVNGNRKLFGQPMQDVDHLPHTL--LASNAYSRGMPKEGGIALADELLKLIE  213 (449)
T ss_dssp             TTCTTCCEEEEETTCCCCSSHH-HHHHCCCHHHHTTTCCCSCSEEEECCCC--CGGGTTCSSSCSSSHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcCCCChh-hhhccCChhhccccCCCCCCCeEecCCc--cccCccccCChHHHHHHHHHHHHHHHH
Confidence                678888877666543211 111111             234444321  1110   124        66665  43


Q ss_pred             ----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccC-cCCCC--cccccc----ccEEEeCCCcccc
Q 043610          207 ----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSS-NFCSK--PVDVTR----FGVIYAGAQKNVG  268 (430)
Q Consensus       207 ----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~-s~G~~--~idl~~----~d~~~~s~~K~~g  268 (430)
                          +++++|++..++++||++.|      +|.++ +++|+++|+|++| ++|..  .+.++.    .|++  +++|+++
T Consensus       214 ~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~  291 (449)
T 3a8u_X          214 LHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVT  291 (449)
T ss_dssp             HHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG
T ss_pred             hcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEccccc
Confidence                46778887777788998765      34554 5899999999999 57732  222222    2555  6679997


Q ss_pred             CCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 043610          269 PSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN  345 (430)
Q Consensus       269 p~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~  345 (430)
                      . |   +|++++++++++.+...... ..... ...+.. .+.|...++++.++|+.+.+    +.+.++.+++++++++
T Consensus       292 ~-G~~~~G~~~~~~~~~~~l~~~~~~-~~~~~-~~~~~t-~~~~~~~~aa~~aal~~~~~----~~~~~~~~~~~~~l~~  363 (449)
T 3a8u_X          292 N-GAIPMGAVIASTEIYQTFMNQPTP-EYAVE-FPHGYT-YSAHPVACAAGLAALCLLQK----ENLVQSVAEVAPHFEK  363 (449)
T ss_dssp             T-TSSCCEEEEEEHHHHHHHHTCSSC-TTSCS-SCCCCT-TTTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHH
T ss_pred             C-CCCceEEEEECHHHHHHhhccCcc-ccccc-ccccCC-CcccHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHH
Confidence            5 6   89999999887765331100 00000 000111 34577788888889987764    2467888889999999


Q ss_pred             HHHccCCceecCCCCCCCccceEEEEcCCCc--h--hH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHH
Q 043610          346 VIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD--L--EA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       346 ~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~--~--~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~  420 (430)
                      .|.+..++..+. .....+ ..+.+.+++..  .  +. ++.+.|.++||.+.++.   +.+||++...++++|++++++
T Consensus       364 ~L~~l~~~~~~~-~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---~~iRis~~~~~t~~~i~~~l~  438 (449)
T 3a8u_X          364 ALHGIKGAKNVI-DIRNFG-LAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG---DTLQFGPTFNSKPQDLDRLFD  438 (449)
T ss_dssp             HHHTTTTSTTEE-EEEEET-TEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET---TEEEECCCTTCCHHHHHHHHH
T ss_pred             HHHHHhcCCCeE-EEeeeE-EEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC---CEEEEECCCcCCHHHHHHHHH
Confidence            998622232211 101122 45667776421  1  22 68888988999987652   579999988899999999999


Q ss_pred             HHHHHHHh
Q 043610          421 FMKDFQAK  428 (430)
Q Consensus       421 ~L~~~~~~  428 (430)
                      +|++++++
T Consensus       439 ~l~~~l~~  446 (449)
T 3a8u_X          439 AVGEVLNK  446 (449)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998764

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.81  E-value=5.6e-19  Score=178.12  Aligned_cols=276  Identities=11%  Similarity=0.041  Sum_probs=180.9

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+++++.+++++|.+   +++++ +||++|+..++.+++++||+|++..+.+.+..  +...+++.| +++.++.    
T Consensus        82 ~~~~l~~~la~~~g~~---~~~~~-~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~----  153 (414)
T 3ndn_A           82 TVSVFEERLRLIEGAP---AAFAT-ASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG----  153 (414)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT----
T ss_pred             HHHHHHHHHHHHHCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC----
Confidence            4568889999999974   56665 78899999999999999999998777766543  112234567 6665543    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc-cccEEEeCCCcc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT-RFGVIYAGAQKN  266 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~-~~d~~~~s~~K~  266 (430)
                           .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.|.....+. ..|+++.|++|+
T Consensus       154 -----~d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~  228 (414)
T 3ndn_A          154 -----DDLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKH  228 (414)
T ss_dssp             -----TCHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTT
T ss_pred             -----CCHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCcc
Confidence                 2567776  7889999999999999999999  78886 68999999999998664322222 237999999999


Q ss_pred             ccCCc---cEEEEEcHHHHh-ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VGPSG---VTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~gp~G---~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      +|+.|   .|+++.+++.+. .+..    ..      .  ...++.+....+.+...++      .++...++..+.+.+
T Consensus       229 l~~~G~~~~G~vv~~~~~~~~~l~~----~~------~--~~g~~~~~~~a~~~~~~l~------~l~~r~~~~~~~a~~  290 (414)
T 3ndn_A          229 IDGQGRVLGGAILGDREYIDGPVQK----LM------R--HTGPAMSAFNAWVLLKGLE------TLAIRVQHSNASAQR  290 (414)
T ss_dssp             TTCSSCCCCEEEEECHHHHTTHHHH----HH------H--HHCCCCCHHHHHHHHHHGG------GHHHHHHHHHHHHHH
T ss_pred             ccCCCCceEEEEEECHHHHHHHHHH----HH------H--HcCCCCCHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Confidence            98877   699999988765 2211    00      0  0112334433333333332      345666777788888


Q ss_pred             HHHHHHccCCceec--CCCCCC----------C-ccceEEEEcCCC----chhH-HHHHHHHHcCCeecCCC--------
Q 043610          343 LYNVIDGSNGFYKC--PVEKSV----------R-SFMNVPFTLEKS----DLEA-EFVKEAAKEKMVQLKGH--------  396 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~~~~~~----------r-s~~iv~f~~~~~----~~~~-~~~~~L~~~Gi~~~~g~--------  396 (430)
                      +.++|.+.+++..+  +.-+..          + ...++.|.+++.    .... +|++.|+..++.+..|.        
T Consensus       291 l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p  370 (414)
T 3ndn_A          291 IAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLVTHP  370 (414)
T ss_dssp             HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEEECG
T ss_pred             HHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCceeeCc
Confidence            99999875554322  211110          1 235688888752    1122 46666655443332221        


Q ss_pred             -----------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          397 -----------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       397 -----------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                                       ...+.||+|++.    ||++.+++.|++.+
T Consensus       371 ~~~~~~~~~~~~~~~~g~~~~~iRlsvG~----e~~~dli~dl~~al  413 (414)
T 3ndn_A          371 ATTTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADIDRAL  413 (414)
T ss_dssp             GGTTTCTTHHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence                             123479999986    55666666665543

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.81  E-value=8.2e-19  Score=178.52  Aligned_cols=314  Identities=9%  Similarity=0.021  Sum_probs=192.7

Q ss_pred             CCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           77 GPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        77 gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      ++.++++.+++++...        ...+   ..+    ....++|+.+++++|.+   +++++ +||++|++.++.++++
T Consensus        52 ~~~~~~~~~~~a~~~~--------~~~y---~~~----~~~~~l~~~la~~~~~~---~~~~~-~~gt~a~~~al~~l~~  112 (456)
T 2ez2_A           52 GTNAMSDKQWAGMMMG--------DEAY---AGS----ENFYHLERTVQELFGFK---HIVPT-HQGRGAENLLSQLAIK  112 (456)
T ss_dssp             SCCCCCHHHHHHHTTC--------CCCS---SSC----HHHHHHHHHHHHHHCCS---EEEEE-SSHHHHHHHHHHHHCC
T ss_pred             CCccCCHHHHHHhhcc--------hhhc---ccC----hhHHHHHHHHHHHhCCC---cEEEe-CCcHHHHHHHHHHhCC
Confidence            4457788888887521        1111   111    23457889999999975   67765 7899999999999889


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC---C---cCCCCCCccccc--cCCCc----cEEEEeecCC-Ccc
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA---E---KYTKIPNFDALE--QNPDA----KYLHICANET-IHG  222 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~---~---~~g~~~d~~~l~--i~~~~----~lv~i~~~~t-~tG  222 (430)
                      +||  ++....+++.. ...++..| +++.++..+.   .   +++..+|+++|+  +++++    ++|++++++| +||
T Consensus       113 ~gd--i~~~~~~~~~~-~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG  189 (456)
T 2ez2_A          113 PGQ--YVAGNMYFTTT-RYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGG  189 (456)
T ss_dssp             TTC--EEEESSCCHHH-HHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTS
T ss_pred             CCC--Eeccccccchh-HHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCC
Confidence            999  55666664532 23455667 7766665421   0   012246788886  55444    8999998887 999


Q ss_pred             ccCC-----CCccc-cCCCcEEEEeccCcCC---------C--Ccccc-------cc-ccEEEeCCCccccCCccEEEEE
Q 043610          223 VEFK-----EYPSA-KNSTGILVADMSSNFC---------S--KPVDV-------TR-FGVIYAGAQKNVGPSGVTIVIV  277 (430)
Q Consensus       223 ~~~p-----ei~~~-~~~g~~lvvD~a~s~G---------~--~~idl-------~~-~d~~~~s~~K~~gp~G~g~l~v  277 (430)
                      ...+     +|.++ +++|+++++|++|++|         .  ....+       .. .|+++.|++|+++++..|+++.
T Consensus       190 ~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~  269 (456)
T 2ez2_A          190 QPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCM  269 (456)
T ss_dssp             BCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEE
T ss_pred             ccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEE
Confidence            9988     35554 5899999999999874         1  11111       12 3777778999987333588888


Q ss_pred             -cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          278 -RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       278 -~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                       ++++++.+......+.+       ....++.+...+.++..++  +... . +...++..++.+++++.|.+ .|+.+.
T Consensus       270 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~a~~~--~~~~-~-~~~~~~~~~~~~~l~~~L~~-~g~~~~  337 (456)
T 2ez2_A          270 NDDEMFSSAKELVVVYEG-------MPSYGGLAGRDMEAMAIGL--REAM-Q-YEYIEHRVKQVRYLGDKLKA-AGVPIV  337 (456)
T ss_dssp             SCHHHHHHHHHHHHHHTC-------CTTTTTCCHHHHHHHHHHH--HHHT-C-HHHHHHHHHHHHHHHHHHHH-TTCCBC
T ss_pred             CCHHHHHHHHHHHhhccC-------cccccCcchhHHHHHHHHH--HHHh-H-HHHHHHHHHHHHHHHHHHhc-CCCccc
Confidence             57776654221110000       0111222333333322222  2211 1 45667777888899999987 577654


Q ss_pred             CCCCCCCccceEEEEcC---CCchhHHH-----HHHH-HHcCCeecC-CC--------------CCCCeeEEeecCC-CC
Q 043610          357 PVEKSVRSFMNVPFTLE---KSDLEAEF-----VKEA-AKEKMVQLK-GH--------------RSVGGMRASIYNA-MP  411 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~---~~~~~~~~-----~~~L-~~~Gi~~~~-g~--------------~~~g~iRis~~~~-~t  411 (430)
                      .  + ..+ ..+.+.+.   +.....++     .+.| .++||.+.+ |.              ...+.+|||+..+ ++
T Consensus       338 ~--p-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t  413 (456)
T 2ez2_A          338 E--P-VGG-HAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYT  413 (456)
T ss_dssp             S--S-CCS-SEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCC
T ss_pred             c--C-CCc-eEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCC
Confidence            2  2 123 23444542   11011134     6666 677987532 21              0125799999976 89


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 043610          412 LAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       412 ~edv~~ll~~L~~~~~~  428 (430)
                      ++|+++++++|++++++
T Consensus       414 ~e~i~~~~~~l~~~l~~  430 (456)
T 2ez2_A          414 YAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998764

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.81  E-value=2e-18  Score=174.86  Aligned_cols=322  Identities=12%  Similarity=0.048  Sum_probs=199.3

Q ss_pred             CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.++|..|..     ..++.|++++.+.+.+...  .+   .....   .+..+++++.|+++++...+.+++++ +|
T Consensus        42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~---~~~~~---~~~~~~l~~~la~~~~~~~~~~v~~~-~g  112 (439)
T 3dxv_A           42 GRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAG--AT---ILSAS---NAPAVTLAERLLASFPGEGTHKIWFG-HS  112 (439)
T ss_dssp             SCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSC--SC---SSSSE---EHHHHHHHHHHHHTTTCTTTEEEEEE-SS
T ss_pred             CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccC--cc---ccccC---CHHHHHHHHHHHHhCCCCCCCEEEEe-CC
Confidence            344556655442     1588999999998865311  11   11111   23456888999999975441267765 78


Q ss_pred             HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHh-CC-c--------------eEEecCCCCcCCCCC----Cc
Q 043610          143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKF-CN-P--------------QVIWSGKAEKYTKIP----NF  200 (430)
Q Consensus       143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~-g~-~--------------~~v~~~~~~~~g~~~----d~  200 (430)
                      ++++++.++..+  ..++++|++.+.++.+...  .+... +. .              ..++...   .....    |+
T Consensus       113 gsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~  187 (439)
T 3dxv_A          113 GSDANEAAYRAIVKATGRSGVIAFAGAYHGCTV--GSMAFSGHSVQADAAKADGLILLPYPDPYRP---YRNDPTGDAIL  187 (439)
T ss_dssp             HHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSH--HHHCC-------------CEEEECCCCSSSC---BTTBTTSHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcH--HHHhhcCCCchhhccccCCCCCCcEEcCCCc---ccccccHHHHH
Confidence            999999988874  3456788877766544321  12222 11 1              1111110   00001    45


Q ss_pred             cccc--c----CCCccEEEEeecCCCccccCC--C-C---ccc-cCCCcEEEEeccCc-CCCC----ccccccc--cEEE
Q 043610          201 DALE--Q----NPDAKYLHICANETIHGVEFK--E-Y---PSA-KNSTGILVADMSSN-FCSK----PVDVTRF--GVIY  260 (430)
Q Consensus       201 ~~l~--i----~~~~~lv~i~~~~t~tG~~~p--e-i---~~~-~~~g~~lvvD~a~s-~G~~----~idl~~~--d~~~  260 (430)
                      ++|+  +    .+++++|++..+++++|.+.+  + +   .++ +++|+++++|++|+ +|..    .++....  |++ 
T Consensus       188 ~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~-  266 (439)
T 3dxv_A          188 TLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL-  266 (439)
T ss_dssp             HHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE-
T ss_pred             HHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE-
Confidence            6666  5    567889999988999999887  3 3   443 58999999999986 4321    1222222  455 


Q ss_pred             eCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610          261 AGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK  338 (430)
Q Consensus       261 ~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~  338 (430)
                       +++|.+|+ |  +|++++++++++.+.+..           .... . .+...+.++.++|+.+.+    +.+.++.++
T Consensus       267 -s~sK~~~~-G~riG~~~~~~~~~~~~~~~~-----------~~~t-~-~~~~~~~aa~aal~~~~~----~~~~~~~~~  327 (439)
T 3dxv_A          267 -VLGKGLGG-GLPLSAVIAPAEILDCASAFA-----------MQTL-H-GNPISAAAGLAVLETIDR----DDLPAMAER  327 (439)
T ss_dssp             -EECGGGGT-TSCCEEEEEEHHHHTSCSSSS-----------CCTT-T-TCHHHHHHHHHHHHHHHH----TTHHHHHHH
T ss_pred             -EEcchhcC-CcceEEEEECHHHHhhhcCCC-----------cCCC-c-ccHHHHHHHHHHHHHHHh----cCHHHHHHH
Confidence             77899974 5  799999999987654310           0112 2 566778888888887654    345566666


Q ss_pred             HHHHHHHHHHcc----CCceecCCCCCCCccceEEEEc--------CCCchhHHHHHHHHHcCCeecCCCCCCCeeEEee
Q 043610          339 KAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTL--------EKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASI  406 (430)
Q Consensus       339 l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~--------~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~  406 (430)
                      +++++++.|.+.    ..+....    ..+ ..+.+.+        ++.....++.+.|.++||.+.++....+.+||++
T Consensus       328 ~~~~~~~~l~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~  402 (439)
T 3dxv_A          328 KGRLLRDGLSELAKRHPLIGDIR----GRG-LACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTP  402 (439)
T ss_dssp             HHHHHHHHHHHHHHHCTTEEEEE----EET-TEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEE----EEE-EEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEEC
Confidence            666666666542    1122111    112 2344544        2211122688888888999877543346899999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHh
Q 043610          407 YNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       407 ~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ....+++|++++++.|++++++
T Consensus       403 ~~~~t~e~i~~~l~~l~~~l~~  424 (439)
T 3dxv_A          403 PLTITETDIHKALDLLDRAFSE  424 (439)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHH
Confidence            9889999999999999998764

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.80  E-value=4.6e-18  Score=171.76  Aligned_cols=313  Identities=9%  Similarity=0.033  Sum_probs=180.9

Q ss_pred             cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC------
Q 043610           82 PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC------  155 (430)
Q Consensus        82 ~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~------  155 (430)
                      ++.|++++.+.+.+... ..    ...+..   +..+++++.|+++++.+.+ +|+++ +|++++++.++..+.      
T Consensus        47 ~p~v~~a~~~~~~~~~~-~~----~~~~~~---~~~~~l~~~la~~~~~~~~-~v~~~-~gg~ea~~~al~~~~~~~~~~  116 (430)
T 3i4j_A           47 RAEVGERMAAQAARLPF-VH----GSQFSS---DVLEEYAGRLARFVGLPTF-RFWAV-SGGSEATESAVKLARQYHVER  116 (430)
T ss_dssp             CHHHHHHHHHHHHHCCC-CC----TTTCEE---HHHHHHHHHHHHHTTCTTC-EEEEE-SSHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHhccc-cc----ccccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-CcHHHHHHHHHHHHHHHHHhc
Confidence            89999999998865311 11    111112   3445778889999998765 77775 789999999888764      


Q ss_pred             --CCCCcEEEEeCChhHHHHHHHHHHhC-C---------------ceEEecCCCCcCC-CCCCccccc--cC----CCcc
Q 043610          156 --TPNDPVDYIVTGSWGDKAFKEAQKFC-N---------------PQVIWSGKAEKYT-KIPNFDALE--QN----PDAK  210 (430)
Q Consensus       156 --~~gd~vl~~~~g~~~~~~~~~a~~~g-~---------------~~~v~~~~~~~~g-~~~d~~~l~--i~----~~~~  210 (430)
                        .++++|++.+..+.+...  .+...+ .               +..++...  .+. ...|+++|+  +.    ++++
T Consensus       117 g~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~le~~l~~~~~~~~~  192 (430)
T 3i4j_A          117 GEPGRFKVITRVPSYHGASL--GSLAASGMGARRELYTPLMRPEAWPKLPKPD--PARNGAEDAEGLRALLEREGPETVA  192 (430)
T ss_dssp             TCTTCCEEEEETTC---------------------------CGGGSCEECCCC--TTSCHHHHHTHHHHHHHHHCGGGEE
T ss_pred             CCCCCcEEEEEeCCcCCCCc--ccccccCccccccccCCcCCCCCceEcCCCc--ccchhhHHHHHHHHHHHhcCCCCEE
Confidence              346788877766555321  111111 1               11111100  000 011335565  43    4566


Q ss_pred             EEEEeecCC-CccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc-----cEEEeCCCccccCCc---
Q 043610          211 YLHICANET-IHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF-----GVIYAGAQKNVGPSG---  271 (430)
Q Consensus       211 lv~i~~~~t-~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~-----d~~~~s~~K~~gp~G---  271 (430)
                      +|++..+++ ++|.+.+      +|.++ +++|+++|+|++|+ +|..  ...+..+     |+++  ++|.+|. |   
T Consensus       193 ~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t--~sK~l~~-G~~r  269 (430)
T 3i4j_A          193 AFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAV--LGKGLAA-GYAP  269 (430)
T ss_dssp             EEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEE--ECGGGTT-TSSC
T ss_pred             EEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEE--EcccccC-Cccc
Confidence            666666677 8888766      24444 58999999999987 5432  1222222     4554  5699975 6   


Q ss_pred             cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc--
Q 043610          272 VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG--  349 (430)
Q Consensus       272 ~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~--  349 (430)
                      +|++++++++++.+.+....+.       .+ ...+.|..++.++.++|+.+.+.    ...++.+++.+++++.|.+  
T Consensus       270 ~G~~~~~~~i~~~~~~~~~~~~-------~~-~t~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~~~~~l~~~~  337 (430)
T 3i4j_A          270 LAGLLAAPQVYETVMGGSGAFM-------HG-FTYAGHPVSVAAGLSVLDIVERE----DLTGAAKERGAQLLAGLQALQ  337 (430)
T ss_dssp             CEEEEECHHHHHHHHHTTCBCC-------CC-CTTTTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECHHHHHHHhccCCccc-------cc-CCCCCCHHHHHHHHHHHHHHHcc----cHHHHHHHHHHHHHHHHHHHH
Confidence            7999999998876432110000       01 11356778888888899877542    3344444444444444443  


Q ss_pred             --cCCceecCCCCCCCccceEEEEcCCC---------chhHHHHHHHHHcCCeecCCC-----CCCCeeEEeecCCCCHH
Q 043610          350 --SNGFYKCPVEKSVRSFMNVPFTLEKS---------DLEAEFVKEAAKEKMVQLKGH-----RSVGGMRASIYNAMPLA  413 (430)
Q Consensus       350 --~~G~~~~~~~~~~rs~~iv~f~~~~~---------~~~~~~~~~L~~~Gi~~~~g~-----~~~g~iRis~~~~~t~e  413 (430)
                        ..++....  +  .. ..+.+.+.+.         ....++.+.|.++||.+.++.     ...+.+||++....+++
T Consensus       338 ~~~~~~~~~~--~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e  412 (430)
T 3i4j_A          338 ARFPQMMQVR--G--TG-LLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAA  412 (430)
T ss_dssp             HHCTTEEEEE--E--ET-TEEEEEEC------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHH
T ss_pred             HhCCCeEEEE--E--EE-EEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHH
Confidence              22333221  1  12 2344555321         011368888999999987651     11347999999888999


Q ss_pred             HHHHHHHHHHHHHHh
Q 043610          414 GVEKLVAFMKDFQAK  428 (430)
Q Consensus       414 dv~~ll~~L~~~~~~  428 (430)
                      ++++++++|++++++
T Consensus       413 ~i~~~l~~l~~~l~~  427 (430)
T 3i4j_A          413 EVDGLLALLAGALED  427 (430)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998875

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.80  E-value=2e-19  Score=176.92  Aligned_cols=313  Identities=14%  Similarity=0.072  Sum_probs=195.5

Q ss_pred             ceeecCCCCCC--cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           71 VFNFAAGPANL--PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        71 ~~l~~~gp~~~--~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ..+.++|+.++  ++.|++++.+.+..           ..+++  ....+++++.+++++|.+.  . +++ +|+++++.
T Consensus        15 ~~~~~~~~~~~g~~p~v~~ai~~~~~~-----------~~~~~--~~~~~~l~~~la~~~~~~~--~-i~~-~~g~~a~~   77 (359)
T 3pj0_A           15 YKLGGNGPRNVGVLTEALQNIDDNLES-----------DIYGN--GAVIEDFETKIAKILGKQS--A-VFF-PSGTMAQQ   77 (359)
T ss_dssp             EESSSSSCCBHHHHHHHTTTSCTTCBC-----------CBTTB--SHHHHHHHHHHHHHHTCSE--E-EEE-SCHHHHHH
T ss_pred             hhhcCCCccccCCCHHHHHHHHhhccc-----------CcccC--CHHHHHHHHHHHHHhCCCc--E-EEe-CCHHHHHH
Confidence            34556666555  78888887764321           11111  1345688899999999864  3 555 67899999


Q ss_pred             HHHhhcCCCCCc-EEEEeCC-hhHHH-HHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCc-c
Q 043610          149 AVPLNLCTPNDP-VDYIVTG-SWGDK-AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIH-G  222 (430)
Q Consensus       149 ~~~~sl~~~gd~-vl~~~~g-~~~~~-~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~t-G  222 (430)
                      .++..+..+||+ ++++... ++... ....+...| +++.++..    .+ .+|+++++ ..+++++|++++++|++ |
T Consensus        78 ~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~-~~d~~~l~~~~~~~~~v~~~~p~n~~~G  152 (359)
T 3pj0_A           78 IALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTA----NQ-LLTIDDIKSLREPVSSVLIELPQREIGG  152 (359)
T ss_dssp             HHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSCT----TS-CCCHHHHHTCSSCCSEEEEESSBGGGTS
T ss_pred             HHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCCc----CC-CcCHHHHHhccCCceEEEEEecccCCCc
Confidence            998888778887 4444433 22221 111123346 65555541    22 47888887 66789999999998887 7


Q ss_pred             ccCC--CC---ccc-cCCCcEEEEeccCcCCCC------cccc-ccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCC
Q 043610          223 VEFK--EY---PSA-KNSTGILVADMSSNFCSK------PVDV-TRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDK  288 (430)
Q Consensus       223 ~~~p--ei---~~~-~~~g~~lvvD~a~s~G~~------~idl-~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~  288 (430)
                      .+.|  ++   .++ +++|+++++|+++.++..      +.++ ...|+++.|+||+++ |.| |+++.++++++.+...
T Consensus       153 ~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~~  231 (359)
T 3pj0_A          153 QLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAG-AILAGNDDFVQEAKIW  231 (359)
T ss_dssp             BCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcce-EEEECCHHHHHHHHHH
Confidence            8888  45   554 589999999998875542      1122 234788889999995 766 8889999988764320


Q ss_pred             CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceE
Q 043610          289 TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV  368 (430)
Q Consensus       289 ~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv  368 (430)
                      ..         ..+....+.+..... ...+++..     . +..++..+++++++++|.+..|+++.+ .+ ..++ .+
T Consensus       232 ~~---------~~~~~~~~~~~~~~a-~~~~l~~~-----~-~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~-~~~~-~~  292 (359)
T 3pj0_A          232 KR---------RYGGDLISLYPYILS-ADYYFEKR-----I-GKMAEYFEAAKGLAERFNSCSGVKTVP-EV-PVSN-MF  292 (359)
T ss_dssp             HH---------HTTCCCSCCHHHHHH-HHHHHHHH-----G-GGHHHHHHHHHHHHHHHHTSTTEEEES-SS-CSSS-EE
T ss_pred             HH---------HhCCCcchhHHHHHH-HHHHHHHH-----H-HHhHHHHHHHHHHHHHHhhCCCceeec-cC-Ccce-EE
Confidence            00         000011122222222 22344432     1 233456778889999999756887742 11 1232 34


Q ss_pred             EEEcCCCc-hhH-HHHHHHHHcCCeecCCCCC----CCeeEEeecC---CCCHHHHHHHHHHHHHH
Q 043610          369 PFTLEKSD-LEA-EFVKEAAKEKMVQLKGHRS----VGGMRASIYN---AMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       369 ~f~~~~~~-~~~-~~~~~L~~~Gi~~~~g~~~----~g~iRis~~~---~~t~edv~~ll~~L~~~  425 (430)
                      .+.++... .+. ++.+.|.++||.+.+|...    .+++|+++..   ..+.+++++.++.|++.
T Consensus       293 ~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          293 HVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             EEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             EEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence            55665322 223 6888899999998887421    2469998864   24688888888888764

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.80  E-value=2.5e-18  Score=174.08  Aligned_cols=323  Identities=14%  Similarity=0.038  Sum_probs=203.4

Q ss_pred             CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC------CCCCcEEEEE
Q 043610           68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN------IPQEYSVLFL  139 (430)
Q Consensus        68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g------~~~~~~vv~~  139 (430)
                      .+.+++++.|-.  +.|+.+++++.+.+........ .|.....+   ..+..++|+.++++++      ++++ +|+++
T Consensus        55 ~~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~-~Y~~~~~G---~~~~~~lr~aia~~~~~~~~~~~~~~-~iv~t  129 (427)
T 2hox_A           55 QGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRM-SYFFNPVS---NFISFELEKTIKELHEVVGNAAAKDR-YIVFG  129 (427)
T ss_dssp             TTCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTC-SSSCSSCC---TTCCHHHHHHHHHHHHHHTCBCCTTC-EEEEE
T ss_pred             CCceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccc-cCCCCCCC---ccchHHHHHHHHHHHHHhCCcCCCCC-EEEEe
Confidence            344666666643  3345677777766521100010 01111101   0112355666666665      4554 77765


Q ss_pred             eCcHHHHHHHHHhhc--------CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCC
Q 043610          140 QGGATTQFAAVPLNL--------CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPD  208 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl--------~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~  208 (430)
                       +|+++++..++..+        ++|||+|++..+.+.++  ...++..| +++.        +  .+|+++|+  ++++
T Consensus       130 -~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~--~~~~~~~g~~~~~--------~--~~d~~~l~~~~~~~  196 (427)
T 2hox_A          130 -VGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVF--REQTKYFDKKGYV--------W--AGNAANYVNVSNPE  196 (427)
T ss_dssp             -SHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHH--HHHHHHSCBTTEE--------E--EEEGGGGTTCSCGG
T ss_pred             -CCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccH--HHHHHHcCCeeee--------e--cCCHHHHHHhhcCC
Confidence             89999999999999        89999998877666543  23455667 6542        2  24666776  5678


Q ss_pred             ccEEEEeecCCCccccCCCCccccCCCcEEEEeccCcCCCCc-ccc-ccccEEEeCCCccccCCc--cEEEEE-cHHHHh
Q 043610          209 AKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKP-VDV-TRFGVIYAGAQKNVGPSG--VTIVIV-RKDLLG  283 (430)
Q Consensus       209 ~~lv~i~~~~t~tG~~~pei~~~~~~g~~lvvD~a~s~G~~~-idl-~~~d~~~~s~~K~~gp~G--~g~l~v-~~~~~~  283 (430)
                      +++|++++++||||.++++  .++  ++..+.|..+.-...+ .++ .+.++++.|++|.+|++|  +|++++ ++++++
T Consensus       197 ~k~v~l~~p~NPtG~~~~~--~l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~  272 (427)
T 2hox_A          197 QYIEMVTSPNNPEGLLRHA--VIK--GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYN  272 (427)
T ss_dssp             GEEEEEESSCTTTCCCCCC--SST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHH
T ss_pred             ceEEEEcCCCCCcccccHH--HHc--CCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHH
Confidence            9999999999999999992  223  4567888765311111 122 234699999999999889  899999 488877


Q ss_pred             ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH---------hcCHHHHHHHHHHHHHHHHHHHHccCCce
Q 043610          284 NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE---------LGGLNEVEKMNRKKAELLYNVIDGSNGFY  354 (430)
Q Consensus       284 ~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~---------~~g~~~v~~~~~~l~~~l~~~l~~~~G~~  354 (430)
                      .+....    ..        ...+++...+.++..+|+...+         +.-++..+++++++++++.+.|++..|+.
T Consensus       273 ~l~~~~----~~--------~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~  340 (427)
T 2hox_A          273 NLLNYM----TK--------NTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFS  340 (427)
T ss_dssp             HHHHHH----HH--------HTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEE
T ss_pred             HHHHHH----Hh--------cCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcc
Confidence            643210    00        1124566667766667764211         11245677888999999999998755776


Q ss_pred             ecCCC-CC---------CCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC---CCCeeEEeecCCCCHHHHHHHHH
Q 043610          355 KCPVE-KS---------VRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR---SVGGMRASIYNAMPLAGVEKLVA  420 (430)
Q Consensus       355 ~~~~~-~~---------~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~---~~g~iRis~~~~~t~edv~~ll~  420 (430)
                      +.... +.         ..+...+.+.+++  ...++.+.| .++||.+.+|..   ..++||||+..  ++++++++++
T Consensus       341 ~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~--~~e~l~~~l~  416 (427)
T 2hox_A          341 YQELPQSEYCNYFRRMRPPSPSYAWVKCEW--EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK--TQDDFDQLMY  416 (427)
T ss_dssp             CCCCCSCEEETTTTEEECCCCSEEEEEECS--GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS--CHHHHHHHHH
T ss_pred             ccccccccccccccccCCCCceEEEEECCC--cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC--CHHHHHHHHH
Confidence            51000 10         0122334456653  123577775 578999887642   24689999985  8999999999


Q ss_pred             HHHHHHHh
Q 043610          421 FMKDFQAK  428 (430)
Q Consensus       421 ~L~~~~~~  428 (430)
                      .|++++++
T Consensus       417 ~l~~~~~~  424 (427)
T 2hox_A          417 YLKDMVKA  424 (427)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHhh
Confidence            99998764

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.80  E-value=5.4e-18  Score=176.75  Aligned_cols=284  Identities=12%  Similarity=0.086  Sum_probs=175.7

Q ss_pred             EEEEEeCcHHHHHHHHHhh-----cCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC
Q 043610          135 SVLFLQGGATTQFAAVPLN-----LCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN  206 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~s-----l~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~  206 (430)
                      +|+++ +|+++++..++..     +++|||+|++..+.+.++...-.....| +++.++..++  .+..+|+++++  ++
T Consensus       167 ~I~~t-~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~~~  243 (546)
T 2zy4_A          167 NLFAV-EGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPS--LNWQYPDSELDKLKD  243 (546)
T ss_dssp             EEEEE-EHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGG--GTTBCCHHHHGGGGS
T ss_pred             eEEEE-CCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcc--cCCCCCHHHHHHhhC
Confidence            77664 7899999998877     5689999999888877653211112235 5666665432  22347888887  57


Q ss_pred             CCccEEEEeecCCCccccCC--C---Cccc---cCCCcEEEEeccCcCCCC-ccccc----cccEEEeCCCccccCCc--
Q 043610          207 PDAKYLHICANETIHGVEFK--E---YPSA---KNSTGILVADMSSNFCSK-PVDVT----RFGVIYAGAQKNVGPSG--  271 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p--e---i~~~---~~~g~~lvvD~a~s~G~~-~idl~----~~d~~~~s~~K~~gp~G--  271 (430)
                      +++++|++++++||||.+++  +   |.++   +++|+++++|++++.... +..+.    +..+++.|++|.+|++|  
T Consensus       244 ~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlR  323 (546)
T 2zy4_A          244 PAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWR  323 (546)
T ss_dssp             TTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGC
T ss_pred             CCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcc
Confidence            88999999999999999999  3   4443   478999999999873322 22221    22478999999999889  


Q ss_pred             cEEEEEcHH-HHhccCCCC------------------Cccccccc----hhhcC--CCCCCccHHHHHHHHH-HH-HHHH
Q 043610          272 VTIVIVRKD-LLGNAQDKT------------------PLMLDYKI----HDENN--SLYNTPPCYCIYMCGL-VF-EYLL  324 (430)
Q Consensus       272 ~g~l~v~~~-~~~~~~~~~------------------p~~~~~~~----~~~~~--~~~~T~~~~~~~a~~~-al-~~l~  324 (430)
                      +|+++++++ +++.+....                  |+.+.+..    .....  ....+.+.+.+.++.. ++ .++.
T Consensus       324 iG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~  403 (546)
T 2zy4_A          324 LGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMD  403 (546)
T ss_dssp             EEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHC
T ss_pred             eEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHh
Confidence            799999875 655431111                  11111000    00000  0112455555554321 11 2221


Q ss_pred             H-hcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC------C----------chhHH-HHHHHH
Q 043610          325 E-LGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK------S----------DLEAE-FVKEAA  386 (430)
Q Consensus       325 ~-~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~------~----------~~~~~-~~~~L~  386 (430)
                      + ....+.+++.+++.++.+.+.|.  .++..   .++ .....+.+.+++      .          ..+.+ +.+.|.
T Consensus       404 ~~~~~~~~~r~~~~~r~~~l~~~L~--~~~~~---~~~-~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~  477 (546)
T 2zy4_A          404 EADEYKHTLKQLIRRRETTLYRELG--MPPLR---DEN-AVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIAD  477 (546)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHGGGT--SSCCC---CTT-BCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcC--CCccc---CCC-CeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHH
Confidence            1 11246677777777777777774  23322   121 233334455531      0          00223 555677


Q ss_pred             HcCCeecCCCCC---CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          387 KEKMVQLKGHRS---VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       387 ~~Gi~~~~g~~~---~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++||.+.+|...   .+++|||+. ..++++++++++.|++++++
T Consensus       478 ~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~  521 (546)
T 2zy4_A          478 ETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADE  521 (546)
T ss_dssp             HHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHH
T ss_pred             HCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHH
Confidence            889999887532   457999997 45789999999999988754

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.80  E-value=2.3e-19  Score=181.44  Aligned_cols=316  Identities=8%  Similarity=-0.023  Sum_probs=194.5

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC--CCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC--TPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~--~~g  158 (430)
                      .++.|++++.+.+.+... . +    ..+..   ....++++.|+++++.+.+ +|+++ +|+++|++.++..+.  ..+
T Consensus        60 ~~p~v~~a~~~~~~~~~~-~-~----~~~~~---~~~~~l~~~la~~~~~~~~-~v~~~-~gg~ea~~~a~~~~~~~~~~  128 (433)
T 1zod_A           60 CHPEIVSVIGEYAGKLDH-L-F----SEMLS---RPVVDLATRLANITPPGLD-RALLL-STGAESNEAAIRMAKLVTGK  128 (433)
T ss_dssp             TCHHHHHHHHHHHHHCCC-C-C----TTCCC---HHHHHHHHHHHHHSCTTCC-EEEEE-SCHHHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHhCcc-c-c----cccCC---HHHHHHHHHHHHhCCCCcC-EEEEe-CchHHHHHHHHHHHHHhhCC
Confidence            388999999998865311 1 0    01111   3345777889999987665 77775 789999999887542  235


Q ss_pred             CcEEEEeCChhHHHHHHHHHH-------h---C-CceEEecCCC--CcCCC------CCCccccc--cC----CCccEEE
Q 043610          159 DPVDYIVTGSWGDKAFKEAQK-------F---C-NPQVIWSGKA--EKYTK------IPNFDALE--QN----PDAKYLH  213 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~-------~---g-~~~~v~~~~~--~~~g~------~~d~~~l~--i~----~~~~lv~  213 (430)
                      ++|++.++++.+.........       +   . .+..++....  .+++.      .+|+++++  ++    +++++|+
T Consensus       129 ~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi  208 (433)
T 1zod_A          129 YEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFI  208 (433)
T ss_dssp             CEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred             CeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            788877766554322111100       0   0 2333333110  01111      12456665  43    5677777


Q ss_pred             EeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--c--cccccc--cEEEeCCCccccC-CccEEEEEc
Q 043610          214 ICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--P--VDVTRF--GVIYAGAQKNVGP-SGVTIVIVR  278 (430)
Q Consensus       214 i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~--idl~~~--d~~~~s~~K~~gp-~G~g~l~v~  278 (430)
                      +..++++||.+.+      +|.++ +++|+++++|++|+ +|..  .  ++....  |++  +++|++|+ ..+|+++++
T Consensus       209 ~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~G~~ig~~~~~  286 (433)
T 1zod_A          209 AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGAGLPLAAIVTS  286 (433)
T ss_dssp             ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHTTSSCEEEEEC
T ss_pred             EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEE--EecccccCCCCeeEEEEh
Confidence            7666688997654      24444 58999999999998 6532  1  121122  444  66799974 238999999


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---CC-ce
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---NG-FY  354 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~G-~~  354 (430)
                      +++++.+.+. . +.       .+.. .+.|..++.++.++++.+.+ .   ...++.+++++++++.|++.   .+ +.
T Consensus       287 ~~~~~~~~~~-~-~~-------~~~t-~~~~~~~~~a~~aal~~~~~-~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~  352 (433)
T 1zod_A          287 AAIEERAHEL-G-YL-------FYTT-HVSDPLPAAVGLRVLDVVQR-D---GLVARANVMGDRLRRGLLDLMERFDCIG  352 (433)
T ss_dssp             HHHHHHHHHT-T-CC-------CCCT-TTTCHHHHHHHHHHHHHHHH-T---THHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred             HHHHHhhccC-C-CC-------CCCC-CCcCHHHHHHHHHHHHHHHh-C---CHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            9887764320 0 00       0011 34577788888899987764 2   35677777888888888752   11 11


Q ss_pred             ecCCCCCCCccceEEEEcCCC--------chhHHHHHHHHHcCCeecCCCCCC--CeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          355 KCPVEKSVRSFMNVPFTLEKS--------DLEAEFVKEAAKEKMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~~--------~~~~~~~~~L~~~Gi~~~~g~~~~--g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      ...    ..+ ..+.+.+++.        ....++.+.|.++||.+.+|....  +.+||++...++++|++++++.|++
T Consensus       353 ~~~----~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~  427 (433)
T 1zod_A          353 DVR----GRG-LLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ  427 (433)
T ss_dssp             EEE----EET-TEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             EEE----EEE-EEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence            111    112 3445555421        112368888989999987654322  6899999888999999999999999


Q ss_pred             HHHh
Q 043610          425 FQAK  428 (430)
Q Consensus       425 ~~~~  428 (430)
                      ++++
T Consensus       428 ~l~~  431 (433)
T 1zod_A          428 AIER  431 (433)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8765

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.80  E-value=3.4e-18  Score=172.38  Aligned_cols=303  Identities=11%  Similarity=0.022  Sum_probs=190.6

Q ss_pred             cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEeCcHHHHHHHHHhhcCC-CCC
Q 043610           82 PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQGGATTQFAAVPLNLCT-PND  159 (430)
Q Consensus        82 ~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~~gaT~a~~~~~~sl~~-~gd  159 (430)
                      ++.|++++.+.+.+....+.     +.+..   ....++++.+++++|.+ ++ +|+++ +|++++++.++..+.. +||
T Consensus        61 ~p~v~~a~~~~~~~~~~~~~-----~~~~~---~~~~~l~~~la~~~~~~~~~-~v~~~-~gg~ea~~~ai~~~~~~~~~  130 (419)
T 2eo5_A           61 HPEVIKIGIEQMQKLAHAAA-----NDFYN---IPQLELAKKLVTYSPGNFQK-KVFFS-NSGTEAIEASIKVVKNTGRK  130 (419)
T ss_dssp             CHHHHHHHHHHHTTSCCCSC-----SCSCC---HHHHHHHHHHHHHSSCSSCE-EEEEE-SSHHHHHHHHHHHHHTTSCC
T ss_pred             CHHHHHHHHHHHhhCccccc-----cccCC---HHHHHHHHHHHHhCCCCcCC-EEEEe-CchHHHHHHHHHHHHHhhCC
Confidence            79999999998864321111     11111   23457778899999986 54 77775 7899999998876432 389


Q ss_pred             cEEEEeCChhHHH--HHHHH-----HH--h---C-CceEEecCCCCcC----CCC----------CCcccc--c-cC---
Q 043610          160 PVDYIVTGSWGDK--AFKEA-----QK--F---C-NPQVIWSGKAEKY----TKI----------PNFDAL--E-QN---  206 (430)
Q Consensus       160 ~vl~~~~g~~~~~--~~~~a-----~~--~---g-~~~~v~~~~~~~~----g~~----------~d~~~l--~-i~---  206 (430)
                      +|++.++.+.+..  .....     .+  .   . .+..++...  .+    |..          +|++++  + ++   
T Consensus       131 ~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~  208 (419)
T 2eo5_A          131 YIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV  208 (419)
T ss_dssp             EEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC
T ss_pred             cEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHHHHHHHHHHHHhhcc
Confidence            9998776654321  11110     00  0   1 334444422  12    100          234454  2 33   


Q ss_pred             --CCccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCc-CCCCc----cccccc--cEEEeCCCcccc-C
Q 043610          207 --PDAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCSKP----VDVTRF--GVIYAGAQKNVG-P  269 (430)
Q Consensus       207 --~~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~~~----idl~~~--d~~~~s~~K~~g-p  269 (430)
                        +++++|++..++++||.+.+  +    |.++ +++|+++++|++|+ +|...    ++....  |++  +++|.+| .
T Consensus       209 ~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G  286 (419)
T 2eo5_A          209 PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGGG  286 (419)
T ss_dssp             CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTT
T ss_pred             CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccCC
Confidence              45667776666677897654  2    4443 57999999999987 65321    222122  454  5779996 3


Q ss_pred             -CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          270 -SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       270 -~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                       .++|+++++++++ .+ .   ..        . ....+.|..++.++.++|+.+.      ++.++.+++++++++.|.
T Consensus       287 ~~riG~~~~~~~~~-~~-~---~~--------~-~~t~~~n~~~~~aa~aal~~~~------~~~~~~~~~~~~l~~~L~  346 (419)
T 2eo5_A          287 IMPIGATIFRKDLD-FK-P---GM--------H-SNTFGGNALACAIGSKVIDIVK------DLLPHVNEIGKIFAEELQ  346 (419)
T ss_dssp             TSCCEEEEEEGGGC-CC-------------------CCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHT
T ss_pred             ccceEEEEEchHhh-cC-C---cc--------c-CCCCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence             5689999998875 42 1   00        0 0113457788888899998653      278889999999999998


Q ss_pred             ccCCceecCCCCCCCccceEEEEcCC-CchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          349 GSNGFYKCPVEKSVRSFMNVPFTLEK-SDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       349 ~~~G~~~~~~~~~~rs~~iv~f~~~~-~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      + . +..+.    ... ..+.+.+.+ ..... +.+.|.++||.+.++.  .+++||++...++++|+++++++|+++++
T Consensus       347 ~-~-~~~~~----~~g-~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~--~~~lRis~~~~~t~e~i~~~l~~l~~~l~  416 (419)
T 2eo5_A          347 G-L-ADDVR----GIG-LAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG--RSAIRVIPPLVISEEEAKQGLDILKKVIK  416 (419)
T ss_dssp             T-S-SSEEE----EET-TEEEEECSCHHHHHH-HHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             H-h-hhheE----eee-EEEEEEEecCccHHH-HHHHHHHCCCEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            6 3 21111    122 244566632 11233 7788888999987642  35799999888999999999999999886


Q ss_pred             h
Q 043610          428 K  428 (430)
Q Consensus       428 ~  428 (430)
                      +
T Consensus       417 ~  417 (419)
T 2eo5_A          417 V  417 (419)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.79  E-value=3.2e-18  Score=173.26  Aligned_cols=285  Identities=16%  Similarity=0.043  Sum_probs=175.7

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~  191 (430)
                      ...+++++.+++++|.+   ..+++ +||++|+..++.+++++||+|++....+.+.. .. ..++..| +++.++.   
T Consensus        82 p~~~~le~~lA~l~g~~---~~v~~-~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~---  154 (430)
T 3ri6_A           82 PTVEDLEQRLKNLTGAL---GVLAL-GSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDV---  154 (430)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             HHHHHHHHHHHHHHCCC---cEEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC---
Confidence            34568899999999986   34555 57889999999999999999987776665542 11 1455667 6665543   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcccccc--ccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTR--FGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~--~d~~~~s~~  264 (430)
                            .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+.. .+..+  .|+++.|++
T Consensus       155 ------~d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-~~~~~~g~div~~S~s  227 (430)
T 3ri6_A          155 ------MDSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-LEAKRLGVDIEVLSST  227 (430)
T ss_dssp             ------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-CCGGGGTCSEEEEECC
T ss_pred             ------CCHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CChHHcCCEEEEECCc
Confidence                  1567776  7889999999999999999999  78886 689999999999987765 23323  379999999


Q ss_pred             ccccCCc--cEEEEE-cHH-HHhccCCCCCc---------ccc-ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610          265 KNVGPSG--VTIVIV-RKD-LLGNAQDKTPL---------MLD-YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN  330 (430)
Q Consensus       265 K~~gp~G--~g~l~v-~~~-~~~~~~~~~p~---------~~~-~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~  330 (430)
                      |++|++|  +|.+++ +.+ .+.... ..+.         +.. ...... ....++++....+.+...++.      +.
T Consensus       228 K~l~g~g~~~gG~vv~~~~~~~~~~~-~~~~l~~~~g~~~~i~~~~~~~~-~~~g~~~~~~~a~l~l~~l~~------l~  299 (430)
T 3ri6_A          228 KFISGGGTSVGGVLIDHGLFEWKSLP-SLAPYYAKAGPMAFLYKARKEVF-QNLGPSLSPHNAYLQSLGLET------MA  299 (430)
T ss_dssp             CEEETTEEECCEEEEECSCSCGGGST-TTHHHHHHHGGGHHHHHHHHTHH-HHHCCCCCHHHHHHHHHHHHH------HH
T ss_pred             ccccCCCCceEEEEEECChHHhhhcc-chhhhhhhhchhhHHHHHHHHHH-HhcCCCCCHHHHHHHHhhhhh------HH
Confidence            9997544  444444 221 111000 0000         000 000000 011123444433333334432      34


Q ss_pred             HHHHHHHHHHHHHHHHHHccCCceec--CCCCCCC----------ccc-eEEEEcCCCchhH-HHHHHHHHcCCeecCCC
Q 043610          331 EVEKMNRKKAELLYNVIDGSNGFYKC--PVEKSVR----------SFM-NVPFTLEKSDLEA-EFVKEAAKEKMVQLKGH  396 (430)
Q Consensus       331 ~v~~~~~~l~~~l~~~l~~~~G~~~~--~~~~~~r----------s~~-iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~  396 (430)
                      .+.++..+.+..+.++|++.++++.+  |.-+...          ... +++|.+++ .... +|++.|+..++....|.
T Consensus       300 ~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~-~~~~~~~~~~l~~~~~~~s~G~  378 (430)
T 3ri6_A          300 LRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES-KEASYRFMDALKLIRRATNIHD  378 (430)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-HHHHHHHHHHCSSSEECSCCSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-HHHHHHHHHhCCcceecCCCCC
Confidence            56677778888999999876665532  2111111          023 88999973 2122 46655543333221111


Q ss_pred             -------------------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          397 -------------------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       397 -------------------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                                               ...+.||+|++.    ||++.+++.|+..+
T Consensus       379 ~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~----E~~~dl~~dl~~al  429 (430)
T 3ri6_A          379 NKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI----EEIEDLKEDILQAL  429 (430)
T ss_dssp             SSCEEECTGGGC---------CGGGSCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred             CCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence                                     123579999985    66777777776654

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.79  E-value=3.2e-18  Score=168.15  Aligned_cols=314  Identities=14%  Similarity=0.076  Sum_probs=190.4

Q ss_pred             ecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhh
Q 043610           74 FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLN  153 (430)
Q Consensus        74 ~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~s  153 (430)
                      ++.|+.|..+++++++.+.+.    .+.+   ...++.  .....++++.+++++|.+.  . +++ +|+++++..++..
T Consensus        15 l~~~~~p~~~~~~~~~~~~~~----~~~~---~~~y~~--~~~~~~l~~~la~~~~~~~--~-i~~-~~G~~a~~~al~~   81 (357)
T 3lws_A           15 QISGHGKRNVGVLKTAFAAVA----DEMA---SDQYGT--GAIIEPFEQKFADVLGMDD--A-VFF-PSGTMAQQVALRI   81 (357)
T ss_dssp             ESSBSSCCBHHHHHHHHTTSC----TTCB---CEETTE--ETTHHHHHHHHHHHHTCSE--E-EEE-SCHHHHHHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHHHhh----cccC---cccccC--ChHHHHHHHHHHHHhCCCc--E-EEe-cCcHHHHHHHHHH
Confidence            456666777777766554321    1110   011111  1234578899999999853  3 555 6789999988888


Q ss_pred             cCCCCCc-EEEEeCC-hhHHHH-HHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCc-cccCC-
Q 043610          154 LCTPNDP-VDYIVTG-SWGDKA-FKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIH-GVEFK-  226 (430)
Q Consensus       154 l~~~gd~-vl~~~~g-~~~~~~-~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~t-G~~~p-  226 (430)
                      +..+||+ ++++... ++.... ...+...| +++.++.    +.+ .+|+++++ . +++++|++++++|++ |.+.+ 
T Consensus        82 ~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~~~-~~d~~~l~~~-~~~~~v~~~~p~np~~G~~~~~  155 (357)
T 3lws_A           82 WSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA----ADR-LMTLDEIKAL-PDIACLLLELPQREIGGVAPAF  155 (357)
T ss_dssp             HHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC----TTS-CCCHHHHHTC-CSCSEEEEESSBGGGTSBCCCH
T ss_pred             HhhcCCCcEEEecccceeeeeccchhhhccCcEEEEecC----CCC-CcCHHHHhcC-cCcceEEEEcccccCCceeCCH
Confidence            8778884 5544433 232210 01223345 5444442    123 47888887 4 459999999999998 99887 


Q ss_pred             -C---Cccc-cCCCcEEEEeccCcC------CCCcccc-ccccEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccc
Q 043610          227 -E---YPSA-KNSTGILVADMSSNF------CSKPVDV-TRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLML  293 (430)
Q Consensus       227 -e---i~~~-~~~g~~lvvD~a~s~------G~~~idl-~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~  293 (430)
                       +   |.++ +++|+++++|+++.+      |.-..++ ...|+++.|+||++ ||.| |+++.++++++.+.....   
T Consensus       156 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~~~~---  231 (357)
T 3lws_A          156 SELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAG-AILAGPAAFCQTARIWKR---  231 (357)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCce-EEEEcCHHHHHHHHHHHH---
Confidence             3   4444 589999999998762      2111122 23478899999999 6988 999999988776432000   


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                            ..+....+.+.... ++..+|+...      +..++..++++++++.|++..|+++.. .++ .++ .+.+.++
T Consensus       232 ------~~~~~~~~~~~~~~-~~~~~l~~~~------~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~-~~~-~~~~~~~  295 (357)
T 3lws_A          232 ------RYGGDLISLYPYIV-SADYYYELRK------DRMGQYYEQAKQLAEQFNALPGVHTTP-EVP-VSN-MFHLHFD  295 (357)
T ss_dssp             ------HTTCCCSCCHHHHH-HHHHHHHHHT------TCHHHHHHHHHHHHHHHHTSTTEEEES-SSC-SSS-EEEEEEE
T ss_pred             ------HhcCCcccchHHHH-HHHHHHHHHH------HHHHHHHHHHHHHHHHHHhCCCCeecc-CCC-cce-EEEEEec
Confidence                  00001112222222 2224454321      223345667888999998766887732 111 232 4556666


Q ss_pred             CCc-h-hHHHHHHHHHcCCeecCCCCC-CC--eeEEeecCC---CCHHHHHHHHHHHHHHH
Q 043610          374 KSD-L-EAEFVKEAAKEKMVQLKGHRS-VG--GMRASIYNA---MPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       374 ~~~-~-~~~~~~~L~~~Gi~~~~g~~~-~g--~iRis~~~~---~t~edv~~ll~~L~~~~  426 (430)
                      +.. . ..++.+.|.++||.+.+|... .+  .+|++++..   .+++++++.++.|++.+
T Consensus       296 ~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          296 GQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             SCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             CChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence            421 1 236888899999998876421 23  799998753   47888888888887653

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.79  E-value=2.9e-18  Score=173.17  Aligned_cols=287  Identities=13%  Similarity=0.006  Sum_probs=175.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEE-ecCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVI-WSGK  190 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v-~~~~  190 (430)
                      ...+++++.+++++|.+   +.+++ ++|++|++.++..++++||+|++....+.+..  |...++..| +++.+ +.  
T Consensus        58 ~~~~~l~~~la~~~g~~---~~v~~-~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--  131 (421)
T 2ctz_A           58 PTVDVLEKRLAALEGGK---AALAT-ASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE--  131 (421)
T ss_dssp             HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT--
T ss_pred             hHHHHHHHHHHHHhCCC---ceEEe-cCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC--
Confidence            35678999999999986   23555 46799999999988899999988776665542  222245567 55544 32  


Q ss_pred             CCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccC-cCCC--CccccccccEEEeC
Q 043610          191 AEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSS-NFCS--KPVDVTRFGVIYAG  262 (430)
Q Consensus       191 ~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~-s~G~--~~idl~~~d~~~~s  262 (430)
                             .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++| ++|.  .++++ ..|++++|
T Consensus       132 -------~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~-~~Di~~~s  203 (421)
T 2ctz_A          132 -------ERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAW-GAALVTHS  203 (421)
T ss_dssp             -------CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGG-TCSEEEEE
T ss_pred             -------CCHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCcccc-CCeEEEEC
Confidence                   2567776  7889999999999999999999  78886 6899999999999 8775  23322 24899999


Q ss_pred             CCccccCCc--cEEEEEcH---HH----HhccCCCCCccccccc--------hhh--cC----CCCCCccHHHHHHHHHH
Q 043610          263 AQKNVGPSG--VTIVIVRK---DL----LGNAQDKTPLMLDYKI--------HDE--NN----SLYNTPPCYCIYMCGLV  319 (430)
Q Consensus       263 ~~K~~gp~G--~g~l~v~~---~~----~~~~~~~~p~~~~~~~--------~~~--~~----~~~~T~~~~~~~a~~~a  319 (430)
                      +||++|.+|  +|++++.+   ++    ++.+.+..+.+.....        ...  ..    ......+....+.+...
T Consensus       204 ~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~  283 (421)
T 2ctz_A          204 LTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLG  283 (421)
T ss_dssp             TTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHH
T ss_pred             CcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence            999997444  68777752   12    1222211111110000        000  00    00113333333333333


Q ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CCCC-------------CCCccceEEEEcCCCchhH-HHHH
Q 043610          320 FEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PVEK-------------SVRSFMNVPFTLEKSDLEA-EFVK  383 (430)
Q Consensus       320 l~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~~~-------------~~rs~~iv~f~~~~~~~~~-~~~~  383 (430)
                      ++      .+....++..++++++.+.|.+.+++..+  +..+             ..+ ..+++|.+++..... .+..
T Consensus       284 l~------~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~-g~ivsf~l~~~~~~~~~~~~  356 (421)
T 2ctz_A          284 ME------TLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKP-GAVLTFGLKGGYEAAKRFIS  356 (421)
T ss_dssp             HT------THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCC-CSEEEEEETTHHHHHHHHHH
T ss_pred             cc------hHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCC-ceEEEEEeCCCHHHHHHHHH
Confidence            43      24455666668999999999986677654  2111             123 357889987410111 3444


Q ss_pred             HHHHcCCeecCC-------------C------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          384 EAAKEKMVQLKG-------------H------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       384 ~L~~~Gi~~~~g-------------~------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .|...++....|             +            ...+.||+|++.    ||++.+++.|++.+
T Consensus       357 ~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l~~al  420 (421)
T 2ctz_A          357 RLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKEAL  420 (421)
T ss_dssp             TCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHHHT
T ss_pred             hCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHh
Confidence            443323222112             1            013679999986    46666666666543

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.78  E-value=6.8e-18  Score=169.72  Aligned_cols=277  Identities=15%  Similarity=0.054  Sum_probs=179.2

Q ss_pred             HHHHHHHHHHhh-hccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEE-eCcHHHHHHHHHhhcCCCCCc
Q 043610           83 EKVLLKAQSELY-NWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFL-QGGATTQFAAVPLNLCTPNDP  160 (430)
Q Consensus        83 ~~V~~a~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~-~~gaT~a~~~~~~sl~~~gd~  160 (430)
                      ..|+++|.+... +....+.+.   +.+++.   -.+++++.+++++|++.  .+++. ++|||+|+..++.++++|||+
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~---~~y~~~---~~~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~~GD~  103 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTG---YGYDDE---GRDTLERVYATVFKTEA--ALVRPQIISGTHAISTVLFGILRPDDE  103 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCT---TCTTCH---HHHHHHHHHHHHHTCSE--EEEETTSCSHHHHHHHHHHHHCCTTCE
T ss_pred             HHHHHHHHHhhhhhhccCCCcC---CCCChh---HHHHHHHHHHHHhCCCc--EEEECCCccHHHHHHHHHHHhcCCCCE
Confidence            468888887642 211112221   112222   25678889999999864  33321 478999999999999999999


Q ss_pred             EEEEe-CChhHHH-HH-------HHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee----cCCCcccc
Q 043610          161 VDYIV-TGSWGDK-AF-------KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA----NETIHGVE  224 (430)
Q Consensus       161 vl~~~-~g~~~~~-~~-------~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~----~~t~tG~~  224 (430)
                      |++.. ..+.+.. ..       ..++..| +++.++..+   .+ .+|+++++  +++++++|++++    ++|++|.+
T Consensus       104 Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~---~g-~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v  179 (409)
T 3jzl_A          104 LLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE---NG-DVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI  179 (409)
T ss_dssp             EEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT---TS-CCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH
T ss_pred             EEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC---CC-CcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc
Confidence            98766 4443332 11       1234557 666666532   23 47888887  788999999999    99999999


Q ss_pred             CC--CCccc-cC--CCcEEEEeccCcCCCC---ccccccccEEEeCCCccccCCc---cEEEEEcHHHHhccCC--CCCc
Q 043610          225 FK--EYPSA-KN--STGILVADMSSNFCSK---PVDVTRFGVIYAGAQKNVGPSG---VTIVIVRKDLLGNAQD--KTPL  291 (430)
Q Consensus       225 ~p--ei~~~-~~--~g~~lvvD~a~s~G~~---~idl~~~d~~~~s~~K~~gp~G---~g~l~v~~~~~~~~~~--~~p~  291 (430)
                      .|  +|.++ ++  +|+++++|++++.+..   +.++ ..|++++|+||++|..|   .|+++.++++++.+..  ..+.
T Consensus       180 ~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~-g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~  258 (409)
T 3jzl_A          180 EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEV-GADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPG  258 (409)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGG-TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTT
T ss_pred             ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCcccc-CCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhcccc
Confidence            99  78886 67  8999999999887763   3332 24899999999996433   3999999999887532  1111


Q ss_pred             cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                      + ..       ....++..  .+++...++.      +..+.++..+.+.++.++|++ .|+++.+.....+...+++|.
T Consensus       259 ~-g~-------~~g~~~~~--~~~~l~gl~~------~~~r~~~~~~~a~~la~~L~~-~g~~v~p~~~~~~~~~i~~i~  321 (409)
T 3jzl_A          259 I-GR-------EAGASLYS--LLEMYQGFFL------APHVTAQAIKGARFTAAMLAE-FGVEADPVWDAPRTDLIQSVS  321 (409)
T ss_dssp             T-GG-------GCCCCTTC--HHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSSCCEEE
T ss_pred             c-cc-------cccccHHH--HHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHh-CCCcccCCCCCCCccEEEEEE
Confidence            1 00       01111211  2223333332      346677788889999999997 788876532222444578888


Q ss_pred             cCCCchhHHHHHHHHHcC
Q 043610          372 LEKSDLEAEFVKEAAKEK  389 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~G  389 (430)
                      +++.....+|++.|+...
T Consensus       322 l~~~~~~~~~~~~L~~~~  339 (409)
T 3jzl_A          322 FHNKEKMVAFAQAIQAAS  339 (409)
T ss_dssp             CSCHHHHHHHHHHHHHTS
T ss_pred             eCCHHHHHHHHHHHHhcC
Confidence            874221226888888764

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.78  E-value=4e-19  Score=181.31  Aligned_cols=314  Identities=10%  Similarity=0.043  Sum_probs=186.7

Q ss_pred             HHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCC-----
Q 043610           83 EKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTP-----  157 (430)
Q Consensus        83 ~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~-----  157 (430)
                      +.|++++.+.+..    |...|   ...+    ...++++.+++++|.+   +++++ +|+|+|++.++..+.++     
T Consensus        53 ~~v~~a~~~~l~~----~~~~y---~~~~----~~~~l~~~la~~~~~~---~v~~t-~~gt~A~~~al~~~~~~~~~~~  117 (467)
T 2oqx_A           53 GAVTQSMQAAMMR----GDEAY---SGSR----SYYALAESVKNIFGYQ---YTIPT-HQGRGAEQIYIPVLIKKREQEK  117 (467)
T ss_dssp             SCCCHHHHHHTTS----CCCCS---SSCH----HHHHHHHHHHHHHCCS---EEEEE-C--CCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcc----Cccee---ccCc----hhHHHHHHHHHHhCcC---cEEEc-CCcHHHHHHHHHHHhccccccC
Confidence            7788888777632    11111   1112    2347789999999873   67775 68899999998888777     


Q ss_pred             C----CcEEEEeCChhHHHHHHHHHHhC-CceEEec------CCCCcCCCCCCccccc--cC----CCccEEEEeecCCC
Q 043610          158 N----DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWS------GKAEKYTKIPNFDALE--QN----PDAKYLHICANETI  220 (430)
Q Consensus       158 g----d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~------~~~~~~g~~~d~~~l~--i~----~~~~lv~i~~~~t~  220 (430)
                      |    |+|++ ...++.. +.......| .+.....      ....++...+|+++|+  ++    +++++|++++++|+
T Consensus       118 G~~~~d~Ii~-~~~h~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~  195 (467)
T 2oqx_A          118 GLDRSKMVAF-SNYFFDT-TQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNS  195 (467)
T ss_dssp             CCCTTTCEEE-ESSCCHH-HHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCG
T ss_pred             CCCccceEEe-ccccccc-chhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccC
Confidence            8    88654 4444332 111222233 2222111      1000122246788887  54    47999999999999


Q ss_pred             c-cccCC-----CCccc-cCCCcEEEEeccCcC-----------CCCccc---c-----ccccEEEeCCCccccCC-ccE
Q 043610          221 H-GVEFK-----EYPSA-KNSTGILVADMSSNF-----------CSKPVD---V-----TRFGVIYAGAQKNVGPS-GVT  273 (430)
Q Consensus       221 t-G~~~p-----ei~~~-~~~g~~lvvD~a~s~-----------G~~~id---l-----~~~d~~~~s~~K~~gp~-G~g  273 (430)
                      + |.+.+     +|.++ +++|+++++|++|++           +...++   +     ...|++++|+||++|++ | |
T Consensus       196 ~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g  274 (467)
T 2oqx_A          196 AGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-G  274 (467)
T ss_dssp             GGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-E
T ss_pred             CCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-e
Confidence            7 88777     35554 689999999988765           222222   1     23578889999999844 6 7


Q ss_pred             EEEEcHH-HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCC
Q 043610          274 IVIVRKD-LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNG  352 (430)
Q Consensus       274 ~l~v~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G  352 (430)
                      +++.+++ +++.+....+ +..+.   .....+++.+...+.++..+++...   . +...++..++++++++.|.+. |
T Consensus       275 ~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~al~~~l~~~~---~-~~~~~~~~~~~~~l~~~L~~~-~  345 (467)
T 2oqx_A          275 LLCMKDDSFFDVYTECRT-LCVVQ---EGFPTYGGLEGGAMERLAVGLYDGM---N-LDWLAYRIAQVQYLVDGLEEI-G  345 (467)
T ss_dssp             EEEECSGGGHHHHHHHHH-HHHHT---TSSCCCCCCCHHHHHHHHHHHHHTT---C-HHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             EEEecChhHHHHHHHHHH-hhhcc---CCcccccchhhhHHHHHHHhhHhhh---h-HHHHHHHHHHHHHHHHHHHHC-C
Confidence            7777766 4332211001 00000   0111234555555544444433211   1 234455567888999999874 7


Q ss_pred             ceecCCCCCCCccceEEEEcC----CCc---h-hHHHHHHH-HHcCCeecC-CC---C-----------CCCeeEEeecC
Q 043610          353 FYKCPVEKSVRSFMNVPFTLE----KSD---L-EAEFVKEA-AKEKMVQLK-GH---R-----------SVGGMRASIYN  408 (430)
Q Consensus       353 ~~~~~~~~~~rs~~iv~f~~~----~~~---~-~~~~~~~L-~~~Gi~~~~-g~---~-----------~~g~iRis~~~  408 (430)
                      +.+.+    ..+ ..+.+.++    +..   . ..++.+.| .++||.+.+ |.   .           ..+.+|+++..
T Consensus       346 ~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~  420 (467)
T 2oqx_A          346 VVCQQ----AGG-HAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPR  420 (467)
T ss_dssp             CCEEE----ECS-SCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCT
T ss_pred             Ceeec----CCc-eEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecC
Confidence            66541    223 34556653    111   1 12468888 888998765 31   0           12689999998


Q ss_pred             C-CCHHHHHHHHHHHHHHHHh
Q 043610          409 A-MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       409 ~-~t~edv~~ll~~L~~~~~~  428 (430)
                      . ++++||+++++.|++++++
T Consensus       421 ~~~t~e~i~~~~~~l~~~l~~  441 (467)
T 2oqx_A          421 ATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHS
T ss_pred             CCCCHHHHHHHHHHHHHHHhh
Confidence            8 9999999999999998763

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.78  E-value=3.6e-18  Score=171.33  Aligned_cols=274  Identities=13%  Similarity=0.065  Sum_probs=176.3

Q ss_pred             HHHHHHHHHh-CCC-----CCcEEEE-EeCcHHHHHHHH---HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEe
Q 043610          119 KAESDLRALL-NIP-----QEYSVLF-LQGGATTQFAAV---PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIW  187 (430)
Q Consensus       119 ~~r~~la~l~-g~~-----~~~~vv~-~~~gaT~a~~~~---~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~  187 (430)
                      ++|+.+++++ |..     ++ +|.+ .+.+++++++.+   +..+.++||+|++..+++.++  ...++..| +++.++
T Consensus        83 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~--~~~~~~~g~~~~~~~  159 (409)
T 4eu1_A           83 SFVEEAQKLCFGPTCAALRDG-RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNH--ESIFAKAGMELTPYS  159 (409)
T ss_dssp             HHHHHHHHHHHCSSCHHHHTT-CEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHH--HHHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHcCCCchhhccC-ceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhH--HHHHHHcCCeEEEEE
Confidence            5667777755 654     33 5632 347889999865   445568899999887776654  34566677 777777


Q ss_pred             cCCCCcCCCCCCccccc--cC---CCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC-Cc-----
Q 043610          188 SGKAEKYTKIPNFDALE--QN---PDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS-KP-----  250 (430)
Q Consensus       188 ~~~~~~~g~~~d~~~l~--i~---~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~-~~-----  250 (430)
                      ..++  .+..+|+++++  +.   ++++++++++++||||.+++  +   |.++ +++|+++++|++++... .+     
T Consensus       160 ~~~~--~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~  237 (409)
T 4eu1_A          160 YYDP--ATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDA  237 (409)
T ss_dssp             CEET--TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHT
T ss_pred             eecC--cCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccch
Confidence            6322  22347888886  42   35677777999999999999  4   5554 58999999999965332 21     


Q ss_pred             ccc----ccc-c-EEEeCCCccccCCc--cEEE--EE-cHH----HHhccCCCCCccccccchhhcCCCCCCccHHHHHH
Q 043610          251 VDV----TRF-G-VIYAGAQKNVGPSG--VTIV--IV-RKD----LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYM  315 (430)
Q Consensus       251 idl----~~~-d-~~~~s~~K~~gp~G--~g~l--~v-~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a  315 (430)
                      ..+    +.. + +++.|++|.+|++|  +|++  ++ +++    +++.+..       +   ..  ....+++...+.+
T Consensus       238 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~-------~---~~--~~~~~~~~~~~~~  305 (409)
T 4eu1_A          238 FVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLAL-------L---IR--PMYNNPPLYGAWV  305 (409)
T ss_dssp             HHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHH-------H---HH--HHHSSCCHHHHHH
T ss_pred             HHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHH-------H---Hh--hhcCCCChHHHHH
Confidence            111    111 2 78899999999888  7886  44 455    3332211       0   00  0113556777777


Q ss_pred             HHHHHHHHH--H--hcCHHHHHHHHHHHHHHHHHHHHccCC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-H
Q 043610          316 CGLVFEYLL--E--LGGLNEVEKMNRKKAELLYNVIDGSNG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-A  386 (430)
Q Consensus       316 ~~~al~~l~--~--~~g~~~v~~~~~~l~~~l~~~l~~~~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~  386 (430)
                      +..+|+...  +  ...++..+++++++++++++.|.+ .|    +.+..  +  .. +.+.+ +.   .+.+++.+| +
T Consensus       306 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~--~--~~-~~~~~-~~---~~~~~~~~ll~  375 (409)
T 4eu1_A          306 VSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKA-CGSVHDWSHIE--R--QV-GMMAY-TG---LTREQVELLRS  375 (409)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCSCCHHHH--H--SC-SSEEE-CC---CCHHHHHHHHH
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcceec--C--Cc-eEEEE-eC---CCHHHHHHHHH
Confidence            777776320  0  113678889999999999999987 55    44332  1  12 22332 21   233455555 5


Q ss_pred             HcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          387 KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       387 ~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ++||.+.+|      .||+++.. +++|+++++++|++++
T Consensus       376 ~~gv~v~p~------~Ri~~~~~-~~~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          376 EYHIYMTLN------GRAAVSGL-NSTNVEYVSQAIHNVT  408 (409)
T ss_dssp             HHCEECCTT------CEEEGGGC-CTTTHHHHHHHHHHHH
T ss_pred             cCCEEEcCC------CEEEEEec-CHhhHHHHHHHHHHHh
Confidence            679998864      58888754 4566999999999876

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.78  E-value=4.8e-18  Score=172.88  Aligned_cols=326  Identities=8%  Similarity=0.009  Sum_probs=195.1

Q ss_pred             CCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .+++++|..|  .   +..++.|++++.+.+.+...  .    ......   +...++++.|+++++.+.  +|+| ++|
T Consensus        48 g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~--~----~~~~~~---~~~~~la~~l~~~~~~~~--~v~~-~~g  115 (452)
T 3n5m_A           48 GKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY--F----PMSQSH---EPAIKLAEKLNEWLGGEY--VIFF-SNS  115 (452)
T ss_dssp             CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC--C----CTTSEE---HHHHHHHHHHHHHHTSCE--EEEE-ESS
T ss_pred             CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC--c----ccccCC---HHHHHHHHHHHHhCCCCc--eEEE-eCc
Confidence            4445666555  2   22478999999998864211  0    011111   345578888999998764  5555 589


Q ss_pred             HHHHHHHHHhhcC-----C---CCCcEEEEeCChhHHHHHHHHHHh-CC-------------ceEEecCCCC--cCCC--
Q 043610          143 ATTQFAAVPLNLC-----T---PNDPVDYIVTGSWGDKAFKEAQKF-CN-------------PQVIWSGKAE--KYTK--  196 (430)
Q Consensus       143 aT~a~~~~~~sl~-----~---~gd~vl~~~~g~~~~~~~~~a~~~-g~-------------~~~v~~~~~~--~~g~--  196 (430)
                      +++|++.++..+.     .   ++++|++...++.+...  .+... |.             ...++.....  +++.  
T Consensus       116 gseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (452)
T 3n5m_A          116 GSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTM--ATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERE  193 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSH--HHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTS
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCH--HHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCch
Confidence            9999999888765     4   67888888777665422  12222 21             1122211000  0000  


Q ss_pred             ----CCCccccc--cC----CCccEEEEeec-CCCccccCC--C----Cccc-cCCCcEEEEeccCc-CCCC--cccccc
Q 043610          197 ----IPNFDALE--QN----PDAKYLHICAN-ETIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCSK--PVDVTR  255 (430)
Q Consensus       197 ----~~d~~~l~--i~----~~~~lv~i~~~-~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~~--~idl~~  255 (430)
                          ..++++|+  +.    +++++|++..+ +| +|.+.|  +    |.++ +++|+++|+|++|+ +|..  .+-.+.
T Consensus       194 ~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~  272 (452)
T 3n5m_A          194 NIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMN  272 (452)
T ss_dssp             CGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGG
T ss_pred             hhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhh
Confidence                00045665  44    56777888777 78 998875  3    4444 58999999999987 5422  222222


Q ss_pred             c----cEEEeCCCccccC--CccEEEEEcHHHHhccCC---CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          256 F----GVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQD---KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       256 ~----d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                      +    |++  +++|.+|.  ..+|++++++++++.+.+   ..+..        .+.+ .+.|..+++++.++|+.+.++
T Consensus       273 ~~~~~di~--t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~--------~~~t-~~~~~~~~aaa~aal~~~~~~  341 (452)
T 3n5m_A          273 YDVKPDII--TMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFR--------HINT-FGGNPAACALALKNLEIIENE  341 (452)
T ss_dssp             TTCCCSEE--EECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCC--------CCCS-STTCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEE--eecccccCCCcceEEEEECHHHHHHHhhccCCCCcc--------ccCC-CCCCHHHHHHHHHHHHHHHhc
Confidence            2    455  46699953  457999999999887642   11111        0112 345677888888899877542


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcCCC-c--------hhHHHHHHHHHcCCeec
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLEKS-D--------LEAEFVKEAAKEKMVQL  393 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~~~-~--------~~~~~~~~L~~~Gi~~~  393 (430)
                          .+.++.+++.+++++.|.+.    .++....    ... ..+.+.+.+. .        ...++.+.|.++||.+.
T Consensus       342 ----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  412 (452)
T 3n5m_A          342 ----NLIERSAQMGSLLLEQLKEEIGEHPLVGDIR----GKG-LLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIG  412 (452)
T ss_dssp             ----THHHHHHHHHHHHHHHHHHHHTTCTTEEEEE----ESS-SCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECE
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE----EEE-EEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEe
Confidence                34455555555555555542    2222111    112 2233443210 0        11257888889999987


Q ss_pred             CCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          394 KGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       394 ~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++..    ..+.+||++...++++|++++++.|++++++
T Consensus       413 ~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          413 RNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             ECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             ecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            6432    2468999999889999999999999998764

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.76  E-value=5.2e-18  Score=170.52  Aligned_cols=322  Identities=10%  Similarity=0.050  Sum_probs=194.4

Q ss_pred             CCceeecCCC-------CCCcHHHHHHHHHHh-hhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCc-EEE
Q 043610           69 DRVFNFAAGP-------ANLPEKVLLKAQSEL-YNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEY-SVL  137 (430)
Q Consensus        69 ~~~~l~~~gp-------~~~~~~V~~a~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~-~vv  137 (430)
                      +++++|+.|-       .++++.|.+++. .+ .+....+++   .....+++   .+.+.+.+....+.  +++. +++
T Consensus        29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~---~~~G~~~l---r~aia~~~~~~~~~~~~~~~i~i~  101 (405)
T 3k7y_A           29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYL---LGNGTEDF---STLTQNLIFGNNSKYIEDKKICTI  101 (405)
T ss_dssp             SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCC---TTSSCHHH---HHHHHHHHHCSSCTTTTTTCEEEE
T ss_pred             cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCC---CCCCcHHH---HHHHHHHHcCCCCccccccceEEE
Confidence            5688998772       346788888866 32 221111221   11122322   22333333222222  2231 235


Q ss_pred             EEeCcHHHHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC--CCcc
Q 043610          138 FLQGGATTQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN--PDAK  210 (430)
Q Consensus       138 ~~~~gaT~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~--~~~~  210 (430)
                      + +.|+++|+..++..+..  | |+|++..+.+.++.  ..++..| +++.++..++..+  .+|+++++  +.  ++++
T Consensus       102 ~-t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~--~~d~~~l~~~l~~~~~~~  175 (405)
T 3k7y_A          102 Q-CIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHV--NMIESRGFNLKYINFFDYNLI--DINYDLFLNDLRNIPNGS  175 (405)
T ss_dssp             E-EEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHH--HHHHTTTCEEEEECCEETTTT--EECHHHHHHHHHHSCSSC
T ss_pred             E-cCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHH--HHHHHcCCeEEEEeccccccC--CcCHHHHHHHHHhCCCCe
Confidence            5 57899999998887765  8 99998887776653  3556677 7777776322123  47888876  43  5678


Q ss_pred             EEEEeec-CCCccccCC--C---Cccc-cCCCcEEEEeccCc-CCCC--cc---cc----cccc--EEEeCCCccccCCc
Q 043610          211 YLHICAN-ETIHGVEFK--E---YPSA-KNSTGILVADMSSN-FCSK--PV---DV----TRFG--VIYAGAQKNVGPSG  271 (430)
Q Consensus       211 lv~i~~~-~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s-~G~~--~i---dl----~~~d--~~~~s~~K~~gp~G  271 (430)
                      +|+++.+ +||||..++  +   |.++ +++|++++.|+++. +...  .-   .+    +..+  +++.|++|.+|++|
T Consensus       176 ~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G  255 (405)
T 3k7y_A          176 SVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYG  255 (405)
T ss_dssp             EEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTT
T ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCcc
Confidence            8888765 899999999  3   4443 57899999999865 3211  10   11    1112  67899999999889


Q ss_pred             --cEEEEE---cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHHHHH
Q 043610          272 --VTIVIV---RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       272 --~g~l~v---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l~~~  342 (430)
                        +|++++   ++++++.+...    +  .....  .....++..++.++..+|+.-  .+  ...++.+++++++.++.
T Consensus       256 lRiG~~~~~~~~~~~~~~~~~~----l--~~~~~--~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~  327 (405)
T 3k7y_A          256 ERAGALHIVCKNQEEKKIVFNN----L--CFIVR--KFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRIL  327 (405)
T ss_dssp             TTEEEEEEECSSHHHHHHHHHH----H--HHHHH--TTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEEeCCHHHHHHHHHH----H--HHHHh--cccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              888764   45555432100    0  00000  112345667777777666531  10  11256677889999999


Q ss_pred             HHHHHH----ccCC----ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHH
Q 043610          343 LYNVID----GSNG----FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAG  414 (430)
Q Consensus       343 l~~~l~----~~~G----~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~ed  414 (430)
                      +.+.|+    + .|    +.+.+  +  ...+-+.+.++     .+++++|.++||.+.+|.      |||+.. .++++
T Consensus       328 l~~~L~~~~~~-~g~~~~~~~~~--p--~gg~f~~~~l~-----~~~~~~L~~~gV~v~p~~------Ris~a~-~~~~~  390 (405)
T 3k7y_A          328 FFNKLETYQKK-YNLNYDWNVYK--K--QRGLFSFVPLL-----AKIAEHLKTHHIYIINNG------RINVSG-ITKNN  390 (405)
T ss_dssp             HHHHHHHHGGG-GTCCCCGGGGS--S--CCSSEEECGGG-----GGGTTTTTTTTEECCTTS------EEEGGG-CCTTH
T ss_pred             HHHHHHhhhhh-cCCCCCCcccc--C--CceEEEecCCC-----HHHHHHHHHCCEeecCCC------eEEEec-cCHHH
Confidence            999998    6 44    44432  1  22222222232     245667767799988752      999873 35789


Q ss_pred             HHHHHHHHHHHHHh
Q 043610          415 VEKLVAFMKDFQAK  428 (430)
Q Consensus       415 v~~ll~~L~~~~~~  428 (430)
                      |++++++|+++++.
T Consensus       391 i~~~~~~i~~~~~~  404 (405)
T 3k7y_A          391 VDYIADKICLSLSQ  404 (405)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998763

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.76  E-value=5.2e-18  Score=171.26  Aligned_cols=249  Identities=15%  Similarity=0.093  Sum_probs=166.5

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEE-eCcHHHHHHHHHhhcCCCCCcEEEEe-CChhHHH-HH--------HHHHHhC-Cce
Q 043610          117 IEKAESDLRALLNIPQEYSVLFL-QGGATTQFAAVPLNLCTPNDPVDYIV-TGSWGDK-AF--------KEAQKFC-NPQ  184 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~-~~gaT~a~~~~~~sl~~~gd~vl~~~-~g~~~~~-~~--------~~a~~~g-~~~  184 (430)
                      .+++++.+++++|++.  .+++. ++||++|+..++.++++|||+|++.. ..+.+.. ..        ..++..| +++
T Consensus        75 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~  152 (427)
T 3i16_A           75 RDSLDAVYARVFNTES--ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYK  152 (427)
T ss_dssp             HHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEE
T ss_pred             HHHHHHHHHHHhCCcc--eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEE
Confidence            5678899999999974  33320 36789999999999999999998765 4444332 11        2234457 666


Q ss_pred             EEecCCCCcCCCCCCccccc--cC--CCccEEEEee----cCCCccccCC--CCccc-cC--CCcEEEEeccCcCCCC--
Q 043610          185 VIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICA----NETIHGVEFK--EYPSA-KN--STGILVADMSSNFCSK--  249 (430)
Q Consensus       185 ~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~----~~t~tG~~~p--ei~~~-~~--~g~~lvvD~a~s~G~~--  249 (430)
                      .++..+   .+ .+|+++++  ++  +++++|++++    ++|++|.+.|  +|.++ ++  +|+++++|++++.+..  
T Consensus       153 ~v~~~~---~g-~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~  228 (427)
T 3i16_A          153 QVDLKE---DG-KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTK  228 (427)
T ss_dssp             ECCCCT---TS-SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSS
T ss_pred             EecCcc---CC-CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccC
Confidence            666532   23 47888887  66  8999999999    9999999999  78886 66  8999999999987763  


Q ss_pred             -ccccccccEEEeCCCccccC---CccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH
Q 043610          250 -PVDVTRFGVIYAGAQKNVGP---SGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL  323 (430)
Q Consensus       250 -~idl~~~d~~~~s~~K~~gp---~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l  323 (430)
                       ++++ ..|+++.|+||++|+   +..|+++.++++++.+..  ..+. +.        .. ..+.....+.   +++-+
T Consensus       229 ~p~~~-gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~-~g--------~~-~~~~~~~a~~---~l~gl  294 (427)
T 3i16_A          229 EPTDV-GADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPG-IG--------GE-CGSTFGVVRS---MYQGL  294 (427)
T ss_dssp             CGGGG-TCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTT-TG--------GG-CCCCTTCHHH---HHHHH
T ss_pred             Ccccc-CCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCc-cC--------cc-CCccHHHHHH---HHHHH
Confidence             2222 248999999999975   224999999999887532  1110 00        00 0111111222   23322


Q ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcC
Q 043610          324 LELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEK  389 (430)
Q Consensus       324 ~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~G  389 (430)
                      .   -+..+.++..+.+.++.++|++ .|+++.+.....+...+++|.+.+.+...+|++.|....
T Consensus       295 ~---~~~~r~~~~~~~a~~la~~L~~-~g~~V~p~~~~~~~~~i~~i~l~~~~~~~~f~~~l~~~~  356 (427)
T 3i16_A          295 F---LAPHISMEALKGAILCSRIMEL-AGFEVMPKYDEKRSDIIQSIKFNDKDKLIEFCKGIQTGS  356 (427)
T ss_dssp             H---HHHHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSSCEEEECSSHHHHHHHHHHHHHTC
T ss_pred             H---HHHHHHHHHHHHHHHHHHHHHh-CCCeecCCCCCCCccEEEEEEECCHHHHHHHHHHHhhcC
Confidence            2   1356778888888999999986 788876532222333478888874221226888887763

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.76  E-value=8.6e-17  Score=164.13  Aligned_cols=332  Identities=10%  Similarity=-0.026  Sum_probs=198.4

Q ss_pred             CCCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..+++++|..|  .   +..++.|++++.+.+.+... ..+   ......   +..+++++.|+++++.+.+ +|+|+ +
T Consensus        49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~~---~~~~~~---~~~~~la~~l~~~~~~~~~-~v~~~-~  119 (460)
T 3gju_A           49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAY-YHA---YVGHGT---EASITLAKMIIDRAPKGMS-RVYFG-L  119 (460)
T ss_dssp             TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSC-CCC---CTTCCC---HHHHHHHHHHHHHSCTTEE-EEEEE-S
T ss_pred             CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc-ccc---ccccCC---HHHHHHHHHHHhhCCCCcC-EEEEe-C
Confidence            34455666554  2   23478999999998865321 111   111111   2455788888898876654 67665 7


Q ss_pred             cHHHHHHHHHhhcCC--------CCCcEEEEeCChhHHHHHHHHHHh-C-------------CceEEecCCC---CcCCC
Q 043610          142 GATTQFAAVPLNLCT--------PNDPVDYIVTGSWGDKAFKEAQKF-C-------------NPQVIWSGKA---EKYTK  196 (430)
Q Consensus       142 gaT~a~~~~~~sl~~--------~gd~vl~~~~g~~~~~~~~~a~~~-g-------------~~~~v~~~~~---~~~g~  196 (430)
                      |+++|++.++..+..        ++++|++.+.++.+....  +... +             .+..++....   .+.+ 
T Consensus       120 gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g-  196 (460)
T 3gju_A          120 SGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVM--TGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRS-  196 (460)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHH--HHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTT-
T ss_pred             chHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHH--HhhccCCcccccccCCCCCCCEEeCCCccccCCccc-
Confidence            899999998877642        457777777666553221  1111 1             2233332110   0011 


Q ss_pred             CCC--------ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccc
Q 043610          197 IPN--------FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVD  252 (430)
Q Consensus       197 ~~d--------~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~id  252 (430)
                       .+        +++|+  +.    +++++|++..+++++|.+.+      +|.++ +++|+++|+|++|+ +|-.  ...
T Consensus       197 -~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~  275 (460)
T 3gju_A          197 -MSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFG  275 (460)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCH
T ss_pred             -cChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccch
Confidence             11        35565  33    46778888877888888665      24444 58999999999987 6532  121


Q ss_pred             cccc----cEEEeCCCccccC--CccEEEEEcHHHHhccCCC----CCccccccchhhcCCCCCCccHHHHHHHHHHHHH
Q 043610          253 VTRF----GVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQDK----TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY  322 (430)
Q Consensus       253 l~~~----d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~~----~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~  322 (430)
                      .+.+    |+++  ++|.++.  ..+|++++++++++.+...    .++.        .+. ..+.|...++++.++|+.
T Consensus       276 ~~~~~~~pdi~t--~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~--------~~~-t~~~~~~~~aaa~aal~~  344 (460)
T 3gju_A          276 SDHYGIKPDLIT--IAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLG--------HGW-TYSAHPICVAAGVANLEL  344 (460)
T ss_dssp             HHHHTCCCSEEE--ECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCS--------CCC-TTTTCHHHHHHHHHHHHH
T ss_pred             HhhcCCCCCeee--eehhhcCCCCCeEEEEECHHHHHHHhcccccccccc--------cCC-CCCCCHHHHHHHHHHHHH
Confidence            2222    4554  5699954  3479999999988764210    0000        011 135567788888899987


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----------hhHHHHHHHHHcCCe
Q 043610          323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----------LEAEFVKEAAKEKMV  391 (430)
Q Consensus       323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~~Gi~  391 (430)
                      +.++.-++.+.+....+++.+.+.+.+...+..+.    ... ..+.+.+.+..           ...++.+.|.++||+
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~  419 (460)
T 3gju_A          345 IDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVR----GDG-MLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVI  419 (460)
T ss_dssp             HHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE----EET-TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEE
T ss_pred             HHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe----eee-EEEEEEEccCccccccccchHHHHHHHHHHHHHCCeE
Confidence            76432245555555556666666555432222211    012 23445543211           122688888899998


Q ss_pred             ecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          392 QLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       392 ~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.++. ..+.+||++....+++|+++++++|++++++
T Consensus       420 v~~~~-~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  455 (460)
T 3gju_A          420 GRAMP-QGDILGFAPPLCLTREQADIVVSKTADAVKS  455 (460)
T ss_dssp             CEECS-SSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EecCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            87643 2368999998889999999999999998764

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.76  E-value=3.2e-17  Score=167.40  Aligned_cols=325  Identities=11%  Similarity=0.019  Sum_probs=202.6

Q ss_pred             CceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           70 RVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        70 ~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      +.++|..|  .   +-.+|.|++++.+.+.+.... +    .+...   .+...++++.|+++++...+ +|+|+ +|++
T Consensus        76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~-~----~~~~~---~~~~~~L~e~la~~~~~~~~-~v~~~-~sGs  145 (457)
T 3tfu_A           76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHV-M----FGGLT---HEPAARLAKLLVDITPAGLD-TVFFS-DSGS  145 (457)
T ss_dssp             EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCC-C----SSSEE---CHHHHHHHHHHHHHSSTTEE-EEEEE-SSHH
T ss_pred             EEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCc-c----ccccC---CHHHHHHHHHHHHhCCCCcC-EEEEe-CcHH
Confidence            45555554  2   224889999999988653110 0    01111   13455888999999987654 67665 7899


Q ss_pred             HHHHHHHhhcCC-------CCC-cEEEEeCChhHHHHHHHHHHh--------------C-CceEEecCCCCcCCCCCCcc
Q 043610          145 TQFAAVPLNLCT-------PND-PVDYIVTGSWGDKAFKEAQKF--------------C-NPQVIWSGKAEKYTKIPNFD  201 (430)
Q Consensus       145 ~a~~~~~~sl~~-------~gd-~vl~~~~g~~~~~~~~~a~~~--------------g-~~~~v~~~~~~~~g~~~d~~  201 (430)
                      +|++.++..+..       +|+ +|++.+.++.+....  +...              . ....++.... .++ ..|++
T Consensus       146 eA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~-~~d~~  221 (457)
T 3tfu_A          146 VSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFL--AMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYD-PAYSA  221 (457)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHH--HHTTSCCC----------CCCCEEECCCCS-SCC-HHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHH--hhcccCCcccccccccCCCCCceEecCCCc-ccC-HHHHH
Confidence            999998877643       555 566566555443211  1111              1 2333332110 111 12556


Q ss_pred             ccc--cC---CCccEEEEee-cCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEe
Q 043610          202 ALE--QN---PDAKYLHICA-NETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYA  261 (430)
Q Consensus       202 ~l~--i~---~~~~lv~i~~-~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~  261 (430)
                      +|+  ++   +++++|++.. +++++|++.+      +|.++ +++|+++|+|++|. +|..  .+.++.+    |++  
T Consensus       222 ~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--  299 (457)
T 3tfu_A          222 AFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--  299 (457)
T ss_dssp             HHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--
T ss_pred             HHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--
Confidence            666  44   6788888888 8899999876      24444 58999999999986 5422  1212222    555  


Q ss_pred             CCCccccC--CccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610          262 GAQKNVGP--SGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR  337 (430)
Q Consensus       262 s~~K~~gp--~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~  337 (430)
                      +++|.+|.  ..+|++++++++++.+..  ..++..        +.+ ++.|...++++.++|+.+.+    +.+.++.+
T Consensus       300 t~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~--------~~t-~~~n~~a~aaa~aaL~~~~~----~~~~~~~~  366 (457)
T 3tfu_A          300 CVGKALTGGYLSLAATLCTADVAHTISAGAAGALMH--------GPT-FMANPLACAVSVASVELLLG----QDWRTRIT  366 (457)
T ss_dssp             EECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCC--------CCT-TTTCHHHHHHHHHHHHHHHT----SCHHHHHH
T ss_pred             EEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeE--------ecC-CCcCHHHHHHHHHHHHHHhh----hHHHHHHH
Confidence            66799953  358999999998876521  011111        112 35577788888889987753    24667777


Q ss_pred             HHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHH
Q 043610          338 KKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       338 ~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~  417 (430)
                      ++.+++++.|.+..++..+. +-.... ..+.+.+++.....++.+.|.++||++.+.   .+.+||++....+++|+++
T Consensus       367 ~~~~~l~~~L~~l~~~~~v~-~vr~~G-~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~---~~~lRi~p~~~~t~eei~~  441 (457)
T 3tfu_A          367 ELAAGLTAGLDTARALPAVT-DVRVCG-AIGVIECDRPVDLAVATPAALDRGVWLRPF---RNLVYAMPPYICTPAEITQ  441 (457)
T ss_dssp             HHHHHHHHHHGGGGGSTTEE-EEEECS-SCEEEEESSCCCHHHHHHHHHHTTEECCCB---TTEEEECCCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCee-eeecCC-eEEEEEECCcccHHHHHHHHHHCCeEEEec---CCEEEEECCCCCCHHHHHH
Confidence            88888888887632111110 000122 345566664222237999999999998752   2479999988889999999


Q ss_pred             HHHHHHHHHHh
Q 043610          418 LVAFMKDFQAK  428 (430)
Q Consensus       418 ll~~L~~~~~~  428 (430)
                      ++++|++++++
T Consensus       442 ~l~~L~~~l~~  452 (457)
T 3tfu_A          442 ITSAMVEVARL  452 (457)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998865

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.75  E-value=8.2e-17  Score=164.09  Aligned_cols=328  Identities=9%  Similarity=0.009  Sum_probs=188.2

Q ss_pred             CCCCceeecCC--CC---CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAG--PA---NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~g--p~---~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.|..|  ..   .-++.|++++.+.+.+....+     .....   .+...++++.|+++++.+...+|+|+ +
T Consensus        62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~-----~~~~~---~~~~~~la~~l~~~~~~~~~~~v~~~-~  132 (453)
T 4ffc_A           62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTC-----FMVTP---YEQYVQVAELLNALTPGDHDKRTALF-N  132 (453)
T ss_dssp             TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCT-----TTTSC---CHHHHHHHHHHHHHSSCSSCEEEEEE-S
T ss_pred             CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccc-----cCcCC---CHHHHHHHHHHHHhCCCCCCcEEEEe-C
Confidence            34445556554  22   248999999999886531111     01111   13445788889999886432267765 8


Q ss_pred             cHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHh-C--------------CceEEecCCC--CcCCCC-----
Q 043610          142 GATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKF-C--------------NPQVIWSGKA--EKYTKI-----  197 (430)
Q Consensus       142 gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~-g--------------~~~~v~~~~~--~~~g~~-----  197 (430)
                      |||+|++.++....  ..+++|++...++.+...  .+... +              .+..++...+  .++|..     
T Consensus       133 sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  210 (453)
T 4ffc_A          133 SGAEAVENAIKVARLATGRPAVVAFDNAYHGRTN--LTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAA  210 (453)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSH--HHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcch--HHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHH
Confidence            99999999886553  235677776666555321  11111 1              2233333210  011100     


Q ss_pred             -CCccccc--cCCCc-cEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEE
Q 043610          198 -PNFDALE--QNPDA-KYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVI  259 (430)
Q Consensus       198 -~d~~~l~--i~~~~-~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~  259 (430)
                       .+.++++  +.++. .+|++..+++..|++.+      +|.++ +++|+++|+|++|+ +|..  ....+.+    |++
T Consensus       211 ~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~  290 (453)
T 4ffc_A          211 RRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIV  290 (453)
T ss_dssp             HHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE
T ss_pred             HHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchH
Confidence             0013343  34444 44444444445566655      24444 58999999999986 5422  1111212    444


Q ss_pred             EeCCCccccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610          260 YAGAQKNVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK  338 (430)
Q Consensus       260 ~~s~~K~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~  338 (430)
                        ++.|.+|+ ..+|++++++++++.+.+..           .+.+ ++.|...+.++.++|+.+.+.    .+.++.++
T Consensus       291 --t~sK~~~~G~~~G~~~~~~~i~~~~~~~~-----------~~~t-~~~~~~~~aaa~aal~~~~~~----~~~~~~~~  352 (453)
T 4ffc_A          291 --TMAKGIAGGMPLSAVTGRAELMDAVYAGG-----------LGGT-YGGNPVTCAAAVAALGVMREL----DLPARARA  352 (453)
T ss_dssp             --EECGGGGTTSSCEEEEEEHHHHTTSCTTS-----------SCCS-SSSCHHHHHHHHHHHHHHHHT----THHHHHHH
T ss_pred             --hhhhhhcCCcCeEEEEECHHHHhhhcccC-----------cCCC-CCcCHHHHHHHHHHHHHhhhh----hHHHHHHH
Confidence              45699964 23899999999887653211           1112 345677888888889877542    34445555


Q ss_pred             HHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcCC------Cc-hhHHHHHHHHHcCCeecCCCCCCCeeEEeec
Q 043610          339 KAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLEK------SD-LEAEFVKEAAKEKMVQLKGHRSVGGMRASIY  407 (430)
Q Consensus       339 l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~~------~~-~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~  407 (430)
                      +.+++++.|.+.    .++..+.    ... ..+.+.+.+      .. ...++.+.|.++||.+.++....+.+||++.
T Consensus       353 ~~~~l~~~l~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~  427 (453)
T 4ffc_A          353 IEASVTSRLSALAEEVDIIGEVR----GRG-AMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPP  427 (453)
T ss_dssp             HHHHHHHHHHHHHHHCSSEEEEE----EET-TEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCC
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEE----eec-eEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECC
Confidence            555555555432    2222111    112 234455421      11 1226888889999998764333457999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHh
Q 043610          408 NAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       408 ~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..++++|++++++.|++++++
T Consensus       428 ~~~t~e~i~~~l~~l~~~l~~  448 (453)
T 4ffc_A          428 LVIGDDLLDEGITALSDIIRA  448 (453)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHH
Confidence            889999999999999998865

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.75  E-value=3.3e-16  Score=159.21  Aligned_cols=318  Identities=10%  Similarity=-0.018  Sum_probs=181.8

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCC----
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCT----  156 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~----  156 (430)
                      .++.|++++.+.+.+.. ...    ......   +...++++.|+++++...+ +|+|+ +||++|++.++..+..    
T Consensus        61 ~~p~v~~A~~~~~~~~~-~~~----~~~~~~---~~~~~la~~l~~~~~~~~~-~v~~~-~sGseA~~~al~~~~~~~~~  130 (448)
T 3dod_A           61 RKKELDDAIKKQLGKIA-HST----LLGMTN---VPATQLAETLIDISPKKLT-RVFYS-DSGAEAMEIALKMAFQYWKN  130 (448)
T ss_dssp             SCHHHHHHHHHHHTTCS-CCC----CSSSEE---HHHHHHHHHHHHHSCTTEE-EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhcc-Ccc----ccccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-CchHHHHHHHHHHHHHHHHh
Confidence            47999999999886421 100    011112   2345778888999875544 67765 7899999998877643    


Q ss_pred             CC----CcEEEEeCChhHHHHHHHHHHh-C-------------CceEEecCCCCcCCC---------CCCccccc--cC-
Q 043610          157 PN----DPVDYIVTGSWGDKAFKEAQKF-C-------------NPQVIWSGKAEKYTK---------IPNFDALE--QN-  206 (430)
Q Consensus       157 ~g----d~vl~~~~g~~~~~~~~~a~~~-g-------------~~~~v~~~~~~~~g~---------~~d~~~l~--i~-  206 (430)
                      +|    |+|++...++.+....  +... +             ....++...  .+..         ..|+++|+  +. 
T Consensus       131 ~G~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~  206 (448)
T 3dod_A          131 IGKPEKQKFIAMKNGYHGDTIG--AVSVGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEE  206 (448)
T ss_dssp             TTCTTCCEEEEEC-------------------------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCEEEEECCCCCCccHH--HHHhcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHh
Confidence            44    8888877766554211  1111 1             112222211  0100         01245565  43 


Q ss_pred             --CCccEEEEeecC-CCccccCC--C----Cccc-cCCCcEEEEeccCc-CCC--Cccccccc----cEEEeCCCccccC
Q 043610          207 --PDAKYLHICANE-TIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCS--KPVDVTRF----GVIYAGAQKNVGP  269 (430)
Q Consensus       207 --~~~~lv~i~~~~-t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~--~~idl~~~----d~~~~s~~K~~gp  269 (430)
                        +++++|++..+. +++|.+.+  +    |.++ +++|+++|+|++|+ +|.  ..+-.+.+    |+++  ++|.+|.
T Consensus       207 ~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t--~sK~l~~  284 (448)
T 3dod_A          207 HHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMA--AGKGITG  284 (448)
T ss_dssp             HGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGT
T ss_pred             CCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEE--ecccccC
Confidence              456677776666 88887765  2    4444 58999999999987 542  12222222    4554  5699963


Q ss_pred             --CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 043610          270 --SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI  347 (430)
Q Consensus       270 --~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l  347 (430)
                        ..+|++++++++++.+.+...   .... ...+.+ ++.|...+.++.++|+.+.++    .+.++.+++.+++++.|
T Consensus       285 G~~~ig~v~~~~~~~~~~~~~~~---~~~~-~~~~~t-~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~~~~~l  355 (448)
T 3dod_A          285 GYLPIAVTFATEDIYKAFYDDYE---NLKT-FFHGHS-YTGNQLGCAVALENLALFESE----NIVEQVAEKSKKLHFLL  355 (448)
T ss_dssp             TSSCCEEEEEEHHHHHTTCSCGG---GCCC-CCCCCT-TTTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHH
T ss_pred             CcCceEEEEECHHHHHHhhhccc---cCCc-ccccCC-CCcCHHHHHHHHHHHHHHhcc----cHHHHHHHHHHHHHHHH
Confidence              246999999999887543100   0000 000111 345677888888899877542    34455555555555555


Q ss_pred             HccCCceecCCCCCCCccceEEEEcCCCch-----------hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610          348 DGSNGFYKCPVEKSVRSFMNVPFTLEKSDL-----------EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       348 ~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~-----------~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~  416 (430)
                      .+..++..+. ...... ..+.+.+++...           ..++.+.|.++||.+.++.   +.+||++...++++|++
T Consensus       356 ~~l~~~~~~~-~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---~~iRi~~~~~~t~e~i~  430 (448)
T 3dod_A          356 QDLHALPHVG-DIRQLG-FMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG---DVIAFLPPLASTAEELS  430 (448)
T ss_dssp             HHHTTSTTEE-EEEEET-TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET---TEEEECCCTTCCHHHHH
T ss_pred             HHHhcCCCeE-EEEeee-EEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC---CEEEEECCCCCCHHHHH
Confidence            4311111110 000112 345555543111           1368888989999987642   57999998889999999


Q ss_pred             HHHHHHHHHHHh
Q 043610          417 KLVAFMKDFQAK  428 (430)
Q Consensus       417 ~ll~~L~~~~~~  428 (430)
                      ++++.|++++++
T Consensus       431 ~~l~~l~~~l~~  442 (448)
T 3dod_A          431 EMVAIMKQAIHE  442 (448)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.74  E-value=8.9e-17  Score=162.49  Aligned_cols=321  Identities=9%  Similarity=-0.005  Sum_probs=190.2

Q ss_pred             CCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.++|..|-.     ..+|.|++++.+.+.+....        .+..   ....++++.|+++++ ..+ +++|+ +
T Consensus        53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--------~~~~---~~~~~l~~~la~~~~-~~~-~v~~~-~  118 (434)
T 3l44_A           53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLY--------GTPT---ALEVKFAKMLKEAMP-ALD-KVRFV-N  118 (434)
T ss_dssp             TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCC--------SSCC---HHHHHHHHHHHHHCT-TCS-EEEEE-S
T ss_pred             CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCC--------CCCC---HHHHHHHHHHHHhCC-CCC-EEEEe-C
Confidence            3444555555431     24899999999988652110        1111   233467778888887 444 77775 7


Q ss_pred             cHHHHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHh-C-CceEEecCCCCcCCC------------CCCccccc-
Q 043610          142 GATTQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKF-C-NPQVIWSGKAEKYTK------------IPNFDALE-  204 (430)
Q Consensus       142 gaT~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~-g-~~~~v~~~~~~~~g~------------~~d~~~l~-  204 (430)
                      |+|++++.++..+..  ++++|++...++.+...  .+... | .........  ..+.            ..|+++++ 
T Consensus       119 sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~--~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~  194 (434)
T 3l44_A          119 SGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSD--LVLVAAGSGPSTLGTPD--SAGVPQSIAQEVITVPFNNVETLKE  194 (434)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSG--GGGBC-------CCCBS--STTCCHHHHTTEEEECTTCHHHHHH
T ss_pred             chHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcH--HHHhhcCCcccccCCCC--cCCCCCcCCCceEecCcccHHHHHH
Confidence            899999998876543  67888877766544211  11111 1 111110000  0110            01566665 


Q ss_pred             -cC---CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc---CCCCc-ccccc--ccEEEeCCCccc
Q 043610          205 -QN---PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN---FCSKP-VDVTR--FGVIYAGAQKNV  267 (430)
Q Consensus       205 -i~---~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s---~G~~~-idl~~--~d~~~~s~~K~~  267 (430)
                       +.   +++++|++..+++++|.+.+      +|.++ +++|+++|+|++|.   .|... ++...  .|++  +++|.+
T Consensus       195 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~  272 (434)
T 3l44_A          195 ALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLT--ALGKVI  272 (434)
T ss_dssp             HHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEE--EEEGGG
T ss_pred             HHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCee--ehhhhh
Confidence             43   56778888877888888875      24444 58999999999987   22111 11111  1444  567999


Q ss_pred             c-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          268 G-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       268 g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                      | ...+|++++++++++.+.+..+.+.        +. .++.|...+.++.++|+.+.+    ++..++.+++++++++.
T Consensus       273 ~~G~~iG~~~~~~~i~~~~~~~~~~~~--------~~-t~~~~~~a~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~  339 (434)
T 3l44_A          273 GGGLPIGAYGGKKEIMEQVAPLGPAYQ--------AG-TMAGNPASMASGIACLEVLQQ----EGLYEKLDELGATLEKG  339 (434)
T ss_dssp             GTTSSCEEEEECHHHHTTBTTTSSBCC--------CC-TTTTCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHH
T ss_pred             cCCcCeeeEEEcHHHHHhhccCCCccc--------CC-CCCcCHHHHHHHHHHHHHHHc----ccHHHHHHHHHHHHHHH
Confidence            6 3348999999999887643221111        11 135677788888888987642    35566667777777777


Q ss_pred             HHcc---CCceecCCCCCCCccceEEEEcCCC------------chh-HHHHHHHHHcCCeecCCCCCCCeeEEeecCCC
Q 043610          347 IDGS---NGFYKCPVEKSVRSFMNVPFTLEKS------------DLE-AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAM  410 (430)
Q Consensus       347 l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~------------~~~-~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~  410 (430)
                      |.+.   .++...   .. .....+.+.+.+.            ... .++.+.|.++||.+.++.  .+.+|+++  .+
T Consensus       340 L~~~~~~~~~~~~---~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~rl~~--~~  411 (434)
T 3l44_A          340 ILEQAAKHNIDIT---LN-RLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSK--YEAWFLTT--EH  411 (434)
T ss_dssp             HHHHHHHTTCCEE---EE-EETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSST--TCCEECCT--TC
T ss_pred             HHHHHHhCCCCEE---EE-eeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecC--CCcEEEec--cc
Confidence            7652   222111   00 1123455554211            111 357888888999987643  24688864  56


Q ss_pred             CHHHHHHHHHHHHHHHHh
Q 043610          411 PLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       411 t~edv~~ll~~L~~~~~~  428 (430)
                      +++|+++++++|++++++
T Consensus       412 t~e~i~~~l~~l~~~l~~  429 (434)
T 3l44_A          412 TKEDIEYTIEAVGRAFAA  429 (434)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            999999999999998764

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.74  E-value=7.8e-17  Score=164.13  Aligned_cols=327  Identities=9%  Similarity=0.011  Sum_probs=188.4

Q ss_pred             CCCceeecCC--CC---CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAG--PA---NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~g--p~---~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.|..|  ..   .-++.|++++.+.+.+...  .+   .....   .+...++++.|+++++.+..++|+|+ +|
T Consensus        60 g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~--~~---~~~~~---~~~~~~la~~l~~~~~~~~~~~v~~~-~s  130 (451)
T 3oks_A           60 GNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTH--TC---FMVTP---YEGYVAVCEQLNRLTPVRGDKRSALF-NS  130 (451)
T ss_dssp             SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSC--CT---TTTSC---CHHHHHHHHHHHHHSSCCSSEEEEEE-SS
T ss_pred             CCEEEEcCCCccccccCCCCHHHHHHHHHHHHhccc--cc---CCccC---CHHHHHHHHHHHHhCCcCCCCEEEEe-Cc
Confidence            3445555554  32   2389999999998864211  10   11111   13445778888898875432267765 89


Q ss_pred             HHHHHHHHHhhcCC--CCCcEEEEeCChhHHHHHHHHHHh-C--------------CceEEecCCC--CcC-CC------
Q 043610          143 ATTQFAAVPLNLCT--PNDPVDYIVTGSWGDKAFKEAQKF-C--------------NPQVIWSGKA--EKY-TK------  196 (430)
Q Consensus       143 aT~a~~~~~~sl~~--~gd~vl~~~~g~~~~~~~~~a~~~-g--------------~~~~v~~~~~--~~~-g~------  196 (430)
                      ||+|++.++.....  .+++|++...++.+....  +... +              .+..++...+  .++ |.      
T Consensus       131 GseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  208 (451)
T 3oks_A          131 GSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNL--TMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDG  208 (451)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHH--HHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCH
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHH--HHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhh
Confidence            99999998866532  346677666665553221  1111 1              2233333210  000 00      


Q ss_pred             CCCcccc----c--cCC-CccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCc-CCCC--ccccccc---
Q 043610          197 IPNFDAL----E--QNP-DAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSN-FCSK--PVDVTRF---  256 (430)
Q Consensus       197 ~~d~~~l----~--i~~-~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~---  256 (430)
                      ..+++.+    +  +.+ ++++|++..+++..|++.+  +    |.++ +++|+++|+|++|+ +|..  ....+.+   
T Consensus       209 ~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~  288 (451)
T 3oks_A          209 ELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGID  288 (451)
T ss_dssp             HHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCC
T ss_pred             HHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCC
Confidence            0012222    1  233 4555666555666677665  2    4443 58999999999987 5421  1222222   


Q ss_pred             -cEEEeCCCccccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043610          257 -GVIYAGAQKNVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEK  334 (430)
Q Consensus       257 -d~~~~s~~K~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~  334 (430)
                       |++  +++|.+|+ ..+|++++++++++.+.+..           .+.+ ++.|...++++.++|+.+.+.    .+.+
T Consensus       289 pdi~--t~sK~l~~G~~iG~v~~~~~~~~~~~~~~-----------~~~t-~~~~~~~~aaa~aal~~~~~~----~~~~  350 (451)
T 3oks_A          289 PDLI--VTAKGIAGGLPLSAVTGRAEIMDSPHVSG-----------LGGT-YGGNPIACAAALATIETIESE----GLVA  350 (451)
T ss_dssp             CSEE--EECGGGGTTSSCEEEEEEHHHHTCSCTTS-----------BCCS-SSSCHHHHHHHHHHHHHHHHT----THHH
T ss_pred             CCee--eehhhhhCCcceEEEEECHHHHhhhcCCC-----------cCCC-CCCCHHHHHHHHHHHHHHhhh----hHHH
Confidence             455  56799964 23799999999987653211           1112 345677888888899877642    3445


Q ss_pred             HHHHHHHHHHHHHHcc----CCceecCCCCCCCccceEEEEcCC------Cc-hhHHHHHHHHHcCCeecCCCCCCCeeE
Q 043610          335 MNRKKAELLYNVIDGS----NGFYKCPVEKSVRSFMNVPFTLEK------SD-LEAEFVKEAAKEKMVQLKGHRSVGGMR  403 (430)
Q Consensus       335 ~~~~l~~~l~~~l~~~----~G~~~~~~~~~~rs~~iv~f~~~~------~~-~~~~~~~~L~~~Gi~~~~g~~~~g~iR  403 (430)
                      +.+++.+++++.|.+.    ..+..+.    ... ..+.+.+.+      .. ...++.+.|.++||.+.++....+.+|
T Consensus       351 ~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iR  425 (451)
T 3oks_A          351 RAQQIEKIMKDRLGRLQAEDDRIGDVR----GRG-AMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVR  425 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTEEEEE----EET-TEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCeEEEE----Eee-EEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEE
Confidence            5555555555555542    2222111    112 244455421      11 122688889999999876433345799


Q ss_pred             EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          404 ASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       404 is~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      |++...++++|++++++.|++++++
T Consensus       426 i~~~~~~t~e~i~~~l~~l~~~l~~  450 (451)
T 3oks_A          426 FLPPLSIGDDLLNEGLDVLEEVLRG  450 (451)
T ss_dssp             ECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHhh
Confidence            9999889999999999999998864

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.74  E-value=5.1e-17  Score=165.78  Aligned_cols=331  Identities=12%  Similarity=0.003  Sum_probs=192.0

Q ss_pred             CCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.|..|  .   +..++.|++++.+.+.+... ..+   ......   +..+++++.|+++++.+.+ +|+|+ +|
T Consensus        49 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~~---~~~~~~---~~~~~la~~l~~~~~~~~~-~v~~~-~g  119 (459)
T 4a6r_A           49 GNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPF-YNT---FFKTTH---PAVVELSSLLAEVTPAGFD-RVFYT-NS  119 (459)
T ss_dssp             CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSC-CCT---TSSSCC---HHHHHHHHHHHHHSCTTCC-EEEEE-SS
T ss_pred             CCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccc-ccc---ccccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-Cc
Confidence            3445555554  2   22478999999998865321 111   111112   3445788899999987665 77775 78


Q ss_pred             HHHHHHHHHhhcCC--------CCCcEEEEeCChhHHHHHHHHHHh-CC-------------ceEEecCCCCcCCCCCC-
Q 043610          143 ATTQFAAVPLNLCT--------PNDPVDYIVTGSWGDKAFKEAQKF-CN-------------PQVIWSGKAEKYTKIPN-  199 (430)
Q Consensus       143 aT~a~~~~~~sl~~--------~gd~vl~~~~g~~~~~~~~~a~~~-g~-------------~~~v~~~~~~~~g~~~d-  199 (430)
                      +++|++.++..+..        ++++|++...++.+....  +... +.             +..++....-..+...| 
T Consensus       120 gseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~  197 (459)
T 4a6r_A          120 GSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIG--GASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTP  197 (459)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHH--HHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCH
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHH--HHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCH
Confidence            99999998887653        467888777766554321  1122 21             12222110000000012 


Q ss_pred             -------ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc
Q 043610          200 -------FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF  256 (430)
Q Consensus       200 -------~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~  256 (430)
                             +++|+  +.    +++++|++..+++.+|.+.+      +|.++ +++|+++|+|++|+ +|-.  ..-.+.+
T Consensus       198 ~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~  277 (459)
T 4a6r_A          198 DEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHF  277 (459)
T ss_dssp             HHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhc
Confidence                   45555  32    45667777667777788765      24454 58999999999987 5432  1112222


Q ss_pred             ----cEEEeCCCccccC--CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610          257 ----GVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN  330 (430)
Q Consensus       257 ----d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~  330 (430)
                          |+++  ++|.++.  ..+|++++++++++.+....+....        .+ ++.|..+++++.++|+.+.++.-++
T Consensus       278 ~~~pdi~t--~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~--------~t-~~~~~~~~aaa~aal~~~~~~~~~~  346 (459)
T 4a6r_A          278 GFQPDLFT--AAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHG--------FT-YSGHPVCAAVAHANVAALRDEGIVQ  346 (459)
T ss_dssp             TCCCSEEE--ECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHH--------HH-HCSCHHHHHHHHHHHHHHHHTCHHH
T ss_pred             CCCCCeee--hhhhhcCCCCCccceeeCHHHHHHhhcCCCcccC--------CC-CCCCHHHHHHHHHHHHHHhcchHHH
Confidence                5554  4699953  4589999999987764310011100        01 2456677888888998775432223


Q ss_pred             HHH-HHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----------hhHHHHHHHHHcCCeecCCCCC
Q 043610          331 EVE-KMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----------LEAEFVKEAAKEKMVQLKGHRS  398 (430)
Q Consensus       331 ~v~-~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~~Gi~~~~g~~~  398 (430)
                      .+. ++...+++.+++.|.+..++..+.    ... ..+.+.+.+..           ...++.+.|.++||++.++.  
T Consensus       347 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g--  419 (459)
T 4a6r_A          347 RVKDDIGPYMQKRWRETFSRFEHVDDVR----GVG-MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG--  419 (459)
T ss_dssp             HHHHTHHHHHHHHHHHHHTTCTTEEEEE----EET-TEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET--
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEEE----EEE-EEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC--
Confidence            333 344444444444444322222211    112 23445443210           12368888889999987642  


Q ss_pred             CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          399 VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       399 ~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       +.+||++....+++|+++++++|++++++
T Consensus       420 -~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  448 (459)
T 4a6r_A          420 -DHIVSAPPLVMTRAEVDEMLAVAERCLEE  448 (459)
T ss_dssp             -TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             -CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence             58999999889999999999999988764

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.74  E-value=5.5e-17  Score=163.78  Aligned_cols=246  Identities=13%  Similarity=0.077  Sum_probs=165.0

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEE-eCcHHHHHHHHHhhcCCCCCcEEEEe-CChhHHH-HH--------HHHHHhC-Cce
Q 043610          117 IEKAESDLRALLNIPQEYSVLFL-QGGATTQFAAVPLNLCTPNDPVDYIV-TGSWGDK-AF--------KEAQKFC-NPQ  184 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~-~~gaT~a~~~~~~sl~~~gd~vl~~~-~g~~~~~-~~--------~~a~~~g-~~~  184 (430)
                      .+++++.+++++|++.  .+++. ++|||+|+..++.++++|||+|++.. ..+.+.. +.        ..++..| +++
T Consensus        76 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~  153 (427)
T 3hvy_A           76 RDSLDRVYANIFNTES--AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYK  153 (427)
T ss_dssp             HHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEE
T ss_pred             HHHHHHHHHHHhCCCc--eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEE
Confidence            6788899999999874  33320 36789999999999999999999766 4444432 11        2234457 666


Q ss_pred             EEecCCCCcCCCCCCccccc--cC--CCccEEEEee----cCCCccccCC--CCccc-cC--CCcEEEEeccCcCCCC--
Q 043610          185 VIWSGKAEKYTKIPNFDALE--QN--PDAKYLHICA----NETIHGVEFK--EYPSA-KN--STGILVADMSSNFCSK--  249 (430)
Q Consensus       185 ~v~~~~~~~~g~~~d~~~l~--i~--~~~~lv~i~~----~~t~tG~~~p--ei~~~-~~--~g~~lvvD~a~s~G~~--  249 (430)
                      .++. +   .+ .+|+++++  ++  +++|+|++++    ++|++|.+.|  +|.++ ++  +|+++++|++++.+..  
T Consensus       154 ~v~~-~---~~-~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~  228 (427)
T 3hvy_A          154 MVDL-K---DG-KVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEK  228 (427)
T ss_dssp             ECCC-B---TT-BCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSS
T ss_pred             EecC-C---CC-CcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCC
Confidence            6655 2   23 47888887  66  8999999999    9999999988  78886 56  8999999999987762  


Q ss_pred             -ccccccccEEEeCCCccccC----CccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCCCccHHHHHHHHHHHHH
Q 043610          250 -PVDVTRFGVIYAGAQKNVGP----SGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY  322 (430)
Q Consensus       250 -~idl~~~d~~~~s~~K~~gp----~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~  322 (430)
                       |+++ ..|+++.|+||++|+    .| |+++.++++++.+..  ..+.. .        .. ..++....+.+...++.
T Consensus       229 ~p~~~-gaDiv~~S~sK~lgg~g~~~G-G~i~~~~~li~~l~~~~~~~~~-g--------~~-~~~~~~~a~~~~~gl~~  296 (427)
T 3hvy_A          229 EPTDV-GADIIAGSLIKNIGGGIATTG-GYIAGKEEYVTQATFRVTVPGI-G--------GE-CGSTFGVMRSLYEGLFM  296 (427)
T ss_dssp             CGGGG-TCSEEEEETTSGGGTTTCCSC-EEEEECHHHHHHHHHHHSCTTT-G--------GG-CCCCTTCHHHHHHHHHH
T ss_pred             CCccc-CCeEEEECCcccccccccceE-EEEEECHHHHHHHHHHhhcCCc-c--------cc-cCCCHHHHHHHHHhHhH
Confidence             3332 248999999999964    44 999999999887532  11100 0        00 01111112222233332


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc
Q 043610          323 LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE  388 (430)
Q Consensus       323 l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~  388 (430)
                            +..+.++..+.+.++.++|++ .|+++.+.....+...+++|.+.+.+.-.+|++.|...
T Consensus       297 ------~~~r~~~~~~~a~~la~~L~~-~g~~V~p~~~~~~~~li~~~~l~~~~~~~~f~~~l~~~  355 (427)
T 3hvy_A          297 ------APHVTIEAVKGAVFCARIMEL-AGFDVLPKYNDKRTDIIQAIKFNDEKKLIDFIKGIQTA  355 (427)
T ss_dssp             ------HHHHHHHHHHHHHHHHHHHHH-TTCEEESCTTSCCSSSEEEEECSSHHHHHHHHHHHHHT
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHh-CCCeecCCCCCCCceEEEEEeCCCHHHHHHHHHHhccc
Confidence                  345777788888999999986 78887653222233347888886422112688888765

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.74  E-value=3.7e-17  Score=166.42  Aligned_cols=314  Identities=9%  Similarity=0.009  Sum_probs=191.7

Q ss_pred             CcHHHH-H-HHHH---HhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEeCcHHHHHHHHHhhc
Q 043610           81 LPEKVL-L-KAQS---ELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN-IPQEYSVLFLQGGATTQFAAVPLNL  154 (430)
Q Consensus        81 ~~~~V~-~-a~~~---~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g-~~~~~~vv~~~~gaT~a~~~~~~sl  154 (430)
                      .+|.|+ + ++.+   .+.+...  .+    +.+..   +...++++.|+++++ .+.+ +|+|+ +|+++|++.++..+
T Consensus        71 ~~p~v~~~~A~~~~~~~~~~~~~--~~----~~~~~---~~~~~la~~la~~~~~~~~~-~v~~~-~~gseA~~~aik~a  139 (449)
T 2cjg_A           71 NPPALVDDREFHAELMQAALNKP--SN----SDVYS---VAMARFVETFARVLGDPALP-HLFFV-EGGALAVENALKAA  139 (449)
T ss_dssp             SCHHHHTCHHHHHHHHHHHTCCC--CT----TTCCC---HHHHHHHHHHHHHHCCTTCC-EEEEE-SSHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhcCC--CC----cccCC---HHHHHHHHHHHHhcCCCCCC-EEEEe-CchHHHHHHHHHHH
Confidence            488999 9 9998   5543211  11    01111   234577788999997 3444 77775 78999999887643


Q ss_pred             C---C----------C-CCcEEEEeCChhHHHH--HHH-----HHHhC-C---ceEEecCCCCc-CCC-------CCCcc
Q 043610          155 C---T----------P-NDPVDYIVTGSWGDKA--FKE-----AQKFC-N---PQVIWSGKAEK-YTK-------IPNFD  201 (430)
Q Consensus       155 ~---~----------~-gd~vl~~~~g~~~~~~--~~~-----a~~~g-~---~~~v~~~~~~~-~g~-------~~d~~  201 (430)
                      .   +          + ||+|++.+..+.+...  ...     ..+.+ .   ..++....++. ...       ..+++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  219 (449)
T 2cjg_A          140 FDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALR  219 (449)
T ss_dssp             HHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHH
T ss_pred             HHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHH
Confidence            2   2          2 8899887766544211  000     00111 1   11121111000 000       01223


Q ss_pred             ccc--c---CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccc--c--ccEEEeC
Q 043610          202 ALE--Q---NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVT--R--FGVIYAG  262 (430)
Q Consensus       202 ~l~--i---~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~--~--~d~~~~s  262 (430)
                      +|+  +   .+++++|++..+++++|.+.+      +|.++ +++|+++++|++|+ +|..  ...++  .  .|++  +
T Consensus       220 ~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t  297 (449)
T 2cjg_A          220 QARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--A  297 (449)
T ss_dssp             HHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--E
T ss_pred             HHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--E
Confidence            365  4   368889888888889996544      34554 58999999999998 5432  11111  1  2555  4


Q ss_pred             CCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          263 AQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       263 ~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++|++ |  +|++++++++++.+.+.   ++..   ...+.+ .+.|...+.++.++|+.+.+    +.+.++.++++++
T Consensus       298 ~sK~l-~--iG~~~~~~~~~~~l~~~---~~~~---~~~~~t-~~~n~~~~~aa~aal~~~~~----~~~~~~~~~~~~~  363 (449)
T 2cjg_A          298 FGKKT-Q--VCGVMAGRRVDEVADNV---FAVP---SRLNST-WGGNLTDMVRARRILEVIEA----EGLFERAVQHGKY  363 (449)
T ss_dssp             ECGGG-S--SEEEEECGGGGGSTTCT---TTST---TSSCCS-SSSCHHHHHHHHHHHHHHHH----HTHHHHHHHHHHH
T ss_pred             ecCcc-c--EEEEEECHHHhhhhhhc---ccCC---cccccC-CCCCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHH
Confidence            56999 4  78999999887754321   0000   001111 35677888888899987764    3467888888888


Q ss_pred             HHHHHHcc----CC-ceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHH
Q 043610          343 LYNVIDGS----NG-FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEK  417 (430)
Q Consensus       343 l~~~l~~~----~G-~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~  417 (430)
                      +++.|.+.    .+ +...  .  ..+ ..+.+.+++.....++.+.|.++||.+.++.  .+.+|+++...++++|+++
T Consensus       364 l~~~L~~l~~~~~~~~~~~--~--~~g-~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g--~~~iRi~~~~~~t~e~i~~  436 (449)
T 2cjg_A          364 LRARLDELAADFPAVVLDP--R--GRG-LMCAFSLPTTADRDELIRQLWQRAVIVLPAG--ADTVRFRPPLTVSTAEIDA  436 (449)
T ss_dssp             HHHHHHHHHHHSTTTSEEE--E--EET-TEEEEECSSHHHHHHHHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHH
T ss_pred             HHHHHHHHHhhCCCceeeE--e--ecc-EEEEEEECChHHHHHHHHHHHHCCeEEecCC--CCEEEEECCCCCCHHHHHH
Confidence            98888752    11 2111  1  123 3456777641122368888988999987642  3689999998999999999


Q ss_pred             HHHHHHHHHHh
Q 043610          418 LVAFMKDFQAK  428 (430)
Q Consensus       418 ll~~L~~~~~~  428 (430)
                      +++.|++++++
T Consensus       437 ~l~~l~~~l~~  447 (449)
T 2cjg_A          437 AIAAVRSALPV  447 (449)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998765

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.74  E-value=5.3e-17  Score=172.61  Aligned_cols=290  Identities=11%  Similarity=0.037  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..+.++++.+|+++|++   ..+++++|++.|+.+++.++++|||+|++..+.|.+..  ..++..| ++++++...+ .
T Consensus       195 g~i~eaE~~lA~~fGa~---~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~--~~l~lsGa~pv~v~~~~~-~  268 (715)
T 3n75_A          195 GPHKEAEQYIARVFNAD---RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLT--HLMMMSDVTPIYFRPTRN-A  268 (715)
T ss_dssp             THHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHH--HHHHHSCCEEEEECCCBC-T
T ss_pred             HHHHHHHHHHHHHhCCC---CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHH--HHHHHcCCEEEEEecccc-c
Confidence            34679999999999997   45666677789999999999999999999988888753  2344557 7777765432 3


Q ss_pred             CCC--CC-----Cccccc--cC--CCcc---EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--Cc----
Q 043610          194 YTK--IP-----NFDALE--QN--PDAK---YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KP----  250 (430)
Q Consensus       194 ~g~--~~-----d~~~l~--i~--~~~~---lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~----  250 (430)
                      ++-  .+     |+++++  +.  +++|   +|+++++ |++|.+.|  +|.++ +.+  .+++|++|+.+.  .+    
T Consensus       269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDEAH~~~~~f~~~~~~  345 (715)
T 3n75_A          269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDSAWVPYTNFSPIYEG  345 (715)
T ss_dssp             TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEECTTCTTGGGSGGGTT
T ss_pred             cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEccccccccccCCcccc
Confidence            431  12     677776  43  4555   8999988 99999999  77776 343  378999998653  11    


Q ss_pred             cc-cc---cccEE---EeCCCcccc-CCccEEEEEcHHHHh-ccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH
Q 043610          251 VD-VT---RFGVI---YAGAQKNVG-PSGVTIVIVRKDLLG-NAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE  321 (430)
Q Consensus       251 id-l~---~~d~~---~~s~~K~~g-p~G~g~l~v~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~  321 (430)
                      .. +.   ..|++   +.|+||+++ +++.|++.++++... ..+.    ++.       ....++|+++.++++..|++
T Consensus       346 ~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~----~~~-------~~~STSpsy~~~AsldaA~~  414 (715)
T 3n75_A          346 KCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNE----AYM-------MHTTTSPHYGIVASTETAAA  414 (715)
T ss_dssp             SSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHH----HHH-------HTSCSSCCHHHHHHHHHHHH
T ss_pred             ccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHH----HHH-------hhcCCCchHHHHHHHHHHHH
Confidence            11 22   13654   899999995 888899998765211 0100    000       01235789999999999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHccCC------ceecCCCC-----------------------C--CCccceEEE
Q 043610          322 YLLELGGLNEVEKMNRKKAELLYNVIDGSNG------FYKCPVEK-----------------------S--VRSFMNVPF  370 (430)
Q Consensus       322 ~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G------~~~~~~~~-----------------------~--~rs~~iv~f  370 (430)
                      ++....| ++..++..+++++++++|.+..+      ++++..+.                       .  ..-++-+++
T Consensus       415 ~~~~~~g-~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i  493 (715)
T 3n75_A          415 MMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTL  493 (715)
T ss_dssp             HHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEE
T ss_pred             HHHhhcc-HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEE
Confidence            8753223 55788899999999999986432      33332110                       0  012344566


Q ss_pred             EcCCC---------chhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          371 TLEKS---------DLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       371 ~~~~~---------~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      ..++.         +... ++.+.|+++||.+-...  ...|=+=+...++++++++|+++|.++.+
T Consensus       494 ~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d--~~~vl~l~s~g~~~~~~~~L~~aL~~~~~  558 (715)
T 3n75_A          494 LTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTG--PYNLLFLFSIGIDKTKALSLLRALTDFKR  558 (715)
T ss_dssp             ECSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEE--TTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecC--CCcEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            66531         3444 67778888899864311  12333334445699999999999998754

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.73  E-value=3.4e-17  Score=165.19  Aligned_cols=319  Identities=10%  Similarity=0.007  Sum_probs=190.4

Q ss_pred             CCCceeecCCC--C---CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP--A---NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp--~---~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.|..|-  .   ..++.|++++.+.+.+...  .      .+   ..+...++++.|+++++ ..+ +++++ +|
T Consensus        51 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~------~~---~~~~~~~la~~l~~~~~-~~~-~v~~~-~g  116 (427)
T 3fq8_A           51 GNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS--F------GA---PCALENVLAEMVNDAVP-SIE-MVRFV-NS  116 (427)
T ss_dssp             SCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC--C------SS---CCHHHHHHHHHHHHHST-TCS-EEEEE-SS
T ss_pred             CCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCC--c------CC---CCHHHHHHHHHHHHhCC-CCC-EEEEe-CC
Confidence            34455565543  1   2489999999998864210  0      01   12345577888999987 444 77775 78


Q ss_pred             HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHHHHh-C-CceEEecCCCCcCCC------------CCCccccc--
Q 043610          143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEAQKF-C-NPQVIWSGKAEKYTK------------IPNFDALE--  204 (430)
Q Consensus       143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a~~~-g-~~~~v~~~~~~~~g~------------~~d~~~l~--  204 (430)
                      ++++++.++...  ...+++|++...++.+...  .+... + ....+....  ..+.            .-|+++++  
T Consensus       117 gsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~  192 (427)
T 3fq8_A          117 GTEACMAVLRIMRAYTGRDKIIKFEGCYHGHAD--MFLVKAGSGVATLGLPS--SPGVPKKTTANTLTTPYNDLEAVKAL  192 (427)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCG--GGCSSCCTHHHHHTCCS--CSSSCHHHHTTEEEEETTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCH--HHHHhcCCcccccCCCC--CCCCCCcccCceeecCCCCHHHHHHH
Confidence            999999887432  1335788877766554211  00000 1 000000000  0010            01566665  


Q ss_pred             cC---CCccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCc-C--CCC-cccccc--ccEEEeCCCcccc
Q 043610          205 QN---PDAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSN-F--CSK-PVDVTR--FGVIYAGAQKNVG  268 (430)
Q Consensus       205 i~---~~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s-~--G~~-~idl~~--~d~~~~s~~K~~g  268 (430)
                      +.   +++++|++..+++++|.+.+  +    |.++ +++|+++|+|++|+ +  |.. ..+...  .|+.  +++|.+|
T Consensus       193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~  270 (427)
T 3fq8_A          193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLT--TLGKIIG  270 (427)
T ss_dssp             HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEE--EECGGGG
T ss_pred             HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChh--hhhhhhh
Confidence            33   36888888888888999888  2    4444 58999999999987 2  211 011111  1454  5559997


Q ss_pred             CCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          269 PSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       269 p~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                       .|  +|+++.++++++.+.+..+.+.         ....+.|...+.++.++|+.+.+    +.+.++.+++.+++++.
T Consensus       271 -~G~~~G~~~~~~~~~~~~~~~~~~~~---------~~t~~~~~~~~aa~~aal~~~~~----~~~~~~~~~~~~~~~~~  336 (427)
T 3fq8_A          271 -GGLPVGAYGGKREIMQLVAPAGPMYQ---------AGTLSGNPLAMTAGIKTLELLRQ----PGTYEYLDQITKRLSDG  336 (427)
T ss_dssp             -TTSSCEEEEECHHHHTTBTTTSSBCC---------CCTTTTCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHH
T ss_pred             -CCcceEEEEEcHHHHHhhccCCCccc---------cCCCCcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence             36  8999999999887643211110         11124577888888889987643    34566677777777777


Q ss_pred             HHcc---CCceecCCCCCCCccceEEEEcCCCch-------------hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCC
Q 043610          347 IDGS---NGFYKCPVEKSVRSFMNVPFTLEKSDL-------------EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAM  410 (430)
Q Consensus       347 l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~~~-------------~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~  410 (430)
                      |.+.   .++...   .. .....+.+.+++...             ..++.+.|.++||.+.++..    .|+++...+
T Consensus       337 l~~~~~~~~~~~~---~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~----~r~~~~~~~  408 (427)
T 3fq8_A          337 LLAIAQETGHAAC---GG-QVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAH  408 (427)
T ss_dssp             HHHHHHHTTCCCE---EE-EETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTC
T ss_pred             HHHHHHhCCCCeE---EE-EeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC----CCEEeeCcC
Confidence            7652   122111   11 112345555543111             12588888899999876431    356666678


Q ss_pred             CHHHHHHHHHHHHHHHHh
Q 043610          411 PLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       411 t~edv~~ll~~L~~~~~~  428 (430)
                      +++|+++++++|++++++
T Consensus       409 t~e~i~~~l~~l~~~l~~  426 (427)
T 3fq8_A          409 TEEDIDATLAAARTVMSA  426 (427)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            999999999999998864

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.72  E-value=1.9e-16  Score=158.92  Aligned_cols=275  Identities=13%  Similarity=-0.015  Sum_probs=170.5

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH--HHHH-HHHhC-CceEEecCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK--AFKE-AQKFC-NPQVIWSGKA  191 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~--~~~~-a~~~g-~~~~v~~~~~  191 (430)
                      ..+++++.|+++.|.+   +++++ +||++|+.+ +.+++++||+|++....|.+..  +... .++.| +++.++.   
T Consensus        68 ~~~~l~~~la~l~g~~---~~~~~-~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~---  139 (400)
T 3nmy_A           68 TRFAYERCVAALEGGT---RAFAF-ASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDL---  139 (400)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECT---
T ss_pred             HHHHHHHHHHHHhCCC---CEEEe-cCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECC---
Confidence            3457888899999976   45665 567999998 5778899999998776665432  2222 44567 6555543   


Q ss_pred             CcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC--CccccccccEEEeCCC
Q 043610          192 EKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS--KPVDVTRFGVIYAGAQ  264 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~--~~idl~~~d~~~~s~~  264 (430)
                            .|+++++  +++++++|++++++|++|.+.|  +|.++ +++|+++++|++++.+.  .++++ ..|+++.|++
T Consensus       140 ------~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~-g~div~~S~s  212 (400)
T 3nmy_A          140 ------TDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSL-GADLVVHSAT  212 (400)
T ss_dssp             ------TSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGG-TCSEEEEETT
T ss_pred             ------CCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhc-CCcEEEecCc
Confidence                  2567776  7889999999999999999999  78886 68999999999987433  44444 3589999999


Q ss_pred             cccc-CC-cc-E-EEEE-cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043610          265 KNVG-PS-GV-T-IVIV-RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKK  339 (430)
Q Consensus       265 K~~g-p~-G~-g-~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l  339 (430)
                      |++| +. .+ | ++++ ++++.+.+..       +.   .  ...++.+....+.+...++      .++...++..+.
T Consensus       213 K~l~g~g~~~gG~~vv~~~~~~~~~l~~-------~~---~--~~g~~~~~~~a~~~l~~l~------~l~~r~~~~~~~  274 (400)
T 3nmy_A          213 KYLNGHSDMVGGIAVVGDNAELAEQMAF-------LQ---N--SIGGVQGPFDSFLALRGLK------TLPLRMRAHCEN  274 (400)
T ss_dssp             TTTTCSSSCCCEEEEECSCHHHHHHHHH-------HH---H--HHCCBCCHHHHHHHHHHHT------THHHHHHHHHHH
T ss_pred             cccCCCCCcceeEEEEeCCHHHHHHHHH-------HH---H--hcCCCCCHHHHHHHHHhHh------HHHHHHHHHHHH
Confidence            9996 41 23 4 3333 5566554321       00   0  0112334443333333332      356677778888


Q ss_pred             HHHHHHHHHccCCceec--CCCCCC----------C-ccceEEEEcCCCchhH-HHHHHHHHcCCeecCC----------
Q 043610          340 AELLYNVIDGSNGFYKC--PVEKSV----------R-SFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKG----------  395 (430)
Q Consensus       340 ~~~l~~~l~~~~G~~~~--~~~~~~----------r-s~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g----------  395 (430)
                      +..+.++|++.+.+..+  +.-+..          + ...+++|.+++..... +|++.|+-.++....|          
T Consensus       275 a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~  354 (400)
T 3nmy_A          275 ALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPA  354 (400)
T ss_dssp             HHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSSEECSCCCSSSCEEECTT
T ss_pred             HHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcceEecCCCCCcceeeCcc
Confidence            88999999875544422  111110          1 2357889987411111 3555544322211111          


Q ss_pred             ---CC------------CCCeeEEeecCCCCHHHHHHHHHHHH
Q 043610          396 ---HR------------SVGGMRASIYNAMPLAGVEKLVAFMK  423 (430)
Q Consensus       396 ---~~------------~~g~iRis~~~~~t~edv~~ll~~L~  423 (430)
                         +.            ..+.+|+|++..+.++.++.|..+|+
T Consensus       355 ~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~  397 (400)
T 3nmy_A          355 VMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV  397 (400)
T ss_dssp             TTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred             ccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence               10            13569999998665655655555554

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.72  E-value=1.1e-16  Score=161.79  Aligned_cols=317  Identities=11%  Similarity=0.009  Sum_probs=192.9

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .+..++|..|-     +..++.|++++.+.+.+..  ..      ...   .+..+++++.|+++++ ..+ +|+++ +|
T Consensus        55 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~------~~~---~~~~~~l~~~la~~~~-~~~-~v~~~-~s  120 (434)
T 2epj_A           55 GARIVDLVLAYGPLILGHKHPRVLEAVEEALARGW--LY------GAP---GEAEVLLAEKILGYVK-RGG-MIRFV-NS  120 (434)
T ss_dssp             CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CC------SSC---CHHHHHHHHHHHHHHC-TTC-EEEEE-SS
T ss_pred             CCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCC--CC------CCC---CHHHHHHHHHHHHhCC-CCC-EEEEe-CC
Confidence            34455665542     2258899999999886411  10      111   1345578888899885 333 67765 78


Q ss_pred             HHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHH--H----HH------hC-C----ceEEecCCCCcCCCCCCcccc
Q 043610          143 ATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKE--A----QK------FC-N----PQVIWSGKAEKYTKIPNFDAL  203 (430)
Q Consensus       143 aT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~--a----~~------~g-~----~~~v~~~~~~~~g~~~d~~~l  203 (430)
                      +++|++.++...  +.++++|+++..++.+......  .    ..      .| .    ..++..    ++   .|++++
T Consensus       121 gseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~----~~---~d~~~l  193 (434)
T 2epj_A          121 GTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVT----PY---NDVEAL  193 (434)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEE----ET---TCHHHH
T ss_pred             HHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEec----CC---CCHHHH
Confidence            999999988761  3446788888766554211000  0    00      11 1    011111    01   256666


Q ss_pred             c--cC---CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC-Ccccccc----ccEEEeCCCc
Q 043610          204 E--QN---PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS-KPVDVTR----FGVIYAGAQK  265 (430)
Q Consensus       204 ~--i~---~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~-~~idl~~----~d~~~~s~~K  265 (430)
                      +  ++   +++++|++..+++++|.+.|      +|.++ +++|+++|+|++|+ +.. ....++.    .|++  +++|
T Consensus       194 e~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK  271 (434)
T 2epj_A          194 ERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGDII--VLGK  271 (434)
T ss_dssp             HHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCSEE--EEEG
T ss_pred             HHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCCee--eecc
Confidence            6  43   46788888777788998875      34554 58999999999998 311 1111111    2554  6679


Q ss_pred             cccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          266 NVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       266 ~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      ++|+ ..+|++++++++++.+.+....+        .+.+ ++.|...++++.++|+.+.+    +.+.++.++++++++
T Consensus       272 ~l~~G~~~G~v~~~~~~~~~l~~~~~~~--------~~~t-~~~~~~~~aa~~a~l~~~~~----~~~~~~~~~~~~~l~  338 (434)
T 2epj_A          272 IIGGGFPVGAVAGSREVMSLLTPQGKVF--------NAGT-FNAHPITMAAGLATLKALEE----EPVYSVSREAAKALE  338 (434)
T ss_dssp             GGGTTSSCEEEEECHHHHTTBTTTSSBC--------CCCT-TTTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHH
T ss_pred             hhcCCcceeeeeecHHHHHhhccCCCcc--------cCCC-CCcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHH
Confidence            9964 12799999999887654311100        0111 24677788888889987764    246677778888888


Q ss_pred             HHHHcc---CCceecCCCCCCCccceEEEEcCCC------------ch-hHHHHHHHHHcCCeecCCCCCCCeeEEeecC
Q 043610          345 NVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKS------------DL-EAEFVKEAAKEKMVQLKGHRSVGGMRASIYN  408 (430)
Q Consensus       345 ~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~------------~~-~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~  408 (430)
                      +.|++.   .++... +.  ..+ ..+.+.+++.            .. ..++.+.|.++||.+.++..  ..+|++  .
T Consensus       339 ~~L~~~~~~~~~~~~-~~--~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~~--~  410 (434)
T 2epj_A          339 EAASEVLDRTGLPYT-IN--RVE-SMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL--EAVFTG--L  410 (434)
T ss_dssp             HHHHHHHHHHTCCEE-EE--EET-TEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT--SCEECC--T
T ss_pred             HHHHHHHhhCCCcEE-EE--Eee-eEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC--CcEEEe--c
Confidence            888753   133211 00  122 3456666531            11 22688889899999877532  235554  5


Q ss_pred             CCCHHHHHHHHHHHHHHHHh
Q 043610          409 AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       409 ~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++++|+++++++|++++++
T Consensus       411 ~~t~e~i~~~l~~l~~~l~~  430 (434)
T 2epj_A          411 PHQGEALEIAVEGLRSSLKT  430 (434)
T ss_dssp             TCSHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHH
Confidence            67999999999999998764

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.71  E-value=6.2e-16  Score=158.43  Aligned_cols=328  Identities=11%  Similarity=0.007  Sum_probs=196.4

Q ss_pred             CCCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.++|..|  .   +-.+|.|++++.+.+.+... ..+   ......   +...++++.|+++++.+.+ +|+|+ +
T Consensus        53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~-~~~---~~~~~~---~~~~~lae~l~~~~~~~~~-~v~~~-~  123 (472)
T 3hmu_A           53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPY-YNT---FFKTTH---VPAIALAQKLAELAPGDLN-HVFFA-G  123 (472)
T ss_dssp             TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSC-CCS---SSSEEC---HHHHHHHHHHHHHSCTTEE-EEEEE-S
T ss_pred             CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccc-ccc---ccccCC---HHHHHHHHHHHHhCCCCCC-EEEEe-C
Confidence            34455666554  2   22478999999998875321 110   111111   3345778888899876554 67665 7


Q ss_pred             cHHHHHHHHHhhcCC--------CCCcEEEEeCChhHHHHHHHHHHh-C------------CceEEecCCCCcCC--CCC
Q 043610          142 GATTQFAAVPLNLCT--------PNDPVDYIVTGSWGDKAFKEAQKF-C------------NPQVIWSGKAEKYT--KIP  198 (430)
Q Consensus       142 gaT~a~~~~~~sl~~--------~gd~vl~~~~g~~~~~~~~~a~~~-g------------~~~~v~~~~~~~~g--~~~  198 (430)
                      ||++|++.++..+..        ++++|++.+.++.+...  .+... +            .+..++...  .+.  ...
T Consensus       124 sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~--~~~~~~~~~~~~~~~~~~~~~~~v~~p~--~~~~~~~~  199 (472)
T 3hmu_A          124 GGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTV--ASSALGGMAGMHAQSGLIPDVHHINQPN--WWAEGGDM  199 (472)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSH--HHHHHSCCHHHHHTTCCCSSEEEECCCC--HHHHCTTC
T ss_pred             CHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccH--HhhhccCChhhccccCCCCCcEEeCCCc--cccCCccc
Confidence            899999998877643        35677766666544321  11111 1            122333211  000  001


Q ss_pred             C--------ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccc
Q 043610          199 N--------FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVT  254 (430)
Q Consensus       199 d--------~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~  254 (430)
                      +        +++|+  +.    +++++|++..+++.+|.+.+      +|.++ +++|+++|+|++|+ +|-.  .+-.+
T Consensus       200 ~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~  279 (472)
T 3hmu_A          200 DPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQ  279 (472)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhH
Confidence            2        45555  33    45677777777888888875      24444 58999999999987 5432  11112


Q ss_pred             c----ccEEEeCCCccccC--CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcC
Q 043610          255 R----FGVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGG  328 (430)
Q Consensus       255 ~----~d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g  328 (430)
                      .    .|+++  +.|.+|-  ..+|++++++++++.+.+ .++..        +.+ ++.|..+++++.++|+.+.+   
T Consensus       280 ~~~v~pdi~t--~sK~l~gg~~plG~v~~~~~i~~~~~~-~~~~~--------~~t-~~~np~a~aAa~aaL~~~~~---  344 (472)
T 3hmu_A          280 TMGIRPHIMT--IAKGLSSGYAPIGGSIVCDEVAHVIGK-DEFNH--------GYT-YSGHPVAAAVALENLRILEE---  344 (472)
T ss_dssp             HHTCCCSEEE--ECGGGTTTSSCCEEEEEEHHHHHHHTT-SCBCC--------CCT-TTTCHHHHHHHHHHHHHHHH---
T ss_pred             HhCCCCceee--echhhhcCCcceEEEEECHHHHHhccc-CCccc--------cCC-CCCCHHHHHHHHHHHHHHHH---
Confidence            1    25665  4599953  347999999999887621 11111        112 34567788888889987754   


Q ss_pred             HHHHHHHHH-HHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc------------hhHHHHHHHHHcCCeecCC
Q 043610          329 LNEVEKMNR-KKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD------------LEAEFVKEAAKEKMVQLKG  395 (430)
Q Consensus       329 ~~~v~~~~~-~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~------------~~~~~~~~L~~~Gi~~~~g  395 (430)
                       +.+.++.+ ++.+++++.|++...+..+. +-.... ..+.+.+.+..            ...++.+.|.++||++.++
T Consensus       345 -~~~~~~~~~~~~~~l~~~L~~l~~~~~v~-~vr~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~  421 (472)
T 3hmu_A          345 -ENILDHVRNVAAPYLKEKWEALTDHPLVG-EAKIVG-MMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV  421 (472)
T ss_dssp             -TTHHHHHHHTHHHHHHHHHHGGGGSTTEE-EEEEET-TEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEecC-ceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec
Confidence             24566666 77777777776521111110 000112 23445554211            1236888888999998763


Q ss_pred             CCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          396 HRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       396 ~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .   +.|||++...++++|+++++++|++++++
T Consensus       422 g---~~iRi~p~~~~t~e~i~~~l~~l~~~l~~  451 (472)
T 3hmu_A          422 G---DRMIISPPLVITPAEIDEMFVRIRKSLDE  451 (472)
T ss_dssp             T---TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             C---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            2   68999998889999999999999998754

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.71  E-value=3.2e-16  Score=157.93  Aligned_cols=322  Identities=12%  Similarity=0.009  Sum_probs=192.3

Q ss_pred             ceeecCC-------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHH-hCC--CCCcEEEEEe
Q 043610           71 VFNFAAG-------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRAL-LNI--PQEYSVLFLQ  140 (430)
Q Consensus        71 ~~l~~~g-------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l-~g~--~~~~~vv~~~  140 (430)
                      .+|++.|       ..++.+.|++|.+..+++-...++.   .....++|+       +.++++ +|.  +.+....+.+
T Consensus        46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~---p~~G~p~lr-------~aia~~~~g~~~~~~~~~~~qt  115 (420)
T 4h51_A           46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYL---PISGYQPFI-------DEAVKIIYGNTVELENLVAVQT  115 (420)
T ss_dssp             CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCC---CTTCCHHHH-------HHHHHHHHC---CGGGEEEEEE
T ss_pred             CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCC---CcCChHHHH-------HHHHHHhcCCCccccccceeee
Confidence            4566655       4567789999876655432222222   122234444       333332 343  2222333335


Q ss_pred             CcHHHHHHHHHh----hcCCCCCcEEEEeCChhHHHHHHHHHHhC-Cce-EEecCCCCcCCCCCCccccc-----cCCCc
Q 043610          141 GGATTQFAAVPL----NLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQ-VIWSGKAEKYTKIPNFDALE-----QNPDA  209 (430)
Q Consensus       141 ~gaT~a~~~~~~----sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~-~v~~~~~~~~g~~~d~~~l~-----i~~~~  209 (430)
                      .|+|.|+...+.    .+..|||+|++.++.+..+.  ...+..| +.+ +.+..++  .+..+|.+.+.     ..+++
T Consensus       116 ~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~--~i~~~aG~~~V~~~~~~~~--~~~~~d~~~~~~~l~~~~~~~  191 (420)
T 4h51_A          116 LSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHY--GVVKAAGWKNICTYAYYDP--KTVSLNFEGMKKDILAAPDGS  191 (420)
T ss_dssp             EHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHH--HHHHHTTCCCEEEEECEEG--GGTEECHHHHHHHHHHSCSSC
T ss_pred             cCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHH--HHHHHcCCeEEEeeccccc--cccCCCHHHHHHHHhccCCCc
Confidence            678888765443    34579999999888776654  3455566 543 3333221  11234554432     46788


Q ss_pred             cEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccC-cCCCCcccc---------cccc--EEEeCCCccccCCc
Q 043610          210 KYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSS-NFCSKPVDV---------TRFG--VIYAGAQKNVGPSG  271 (430)
Q Consensus       210 ~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~-s~G~~~idl---------~~~d--~~~~s~~K~~gp~G  271 (430)
                      ++++++.++||||...+  +   |.++ ++++++++.|+++ .+.....+.         +..+  +++.|++|.+|++|
T Consensus       192 ~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G  271 (420)
T 4h51_A          192 VFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYS  271 (420)
T ss_dssp             EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG
T ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccccccc
Confidence            88888999999999999  3   4454 6889999999875 444322111         1112  67899999999989


Q ss_pred             --cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHH
Q 043610          272 --VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY--LLE--LGGLNEVEKMNRKKAELLYN  345 (430)
Q Consensus       272 --~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~--l~~--~~g~~~v~~~~~~l~~~l~~  345 (430)
                        +|++++..+..+....... .+  .. . ....+..++..++..+...+..  +..  +..++.++++++++++.+.+
T Consensus       272 ~RvG~~~~~~~~~~~~~~~~~-~l--~~-~-~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~  346 (420)
T 4h51_A          272 ERAGTLSLLLKDKTKRADVKS-VM--DS-L-IREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYD  346 (420)
T ss_dssp             GCEEEEEEECSCHHHHHHHHH-HH--HH-H-HHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecccCHHHHHHHHH-HH--HH-h-hhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              9998876443332110000 00  00 0 1122346677777776666631  110  12467889999999999999


Q ss_pred             HHHccCCce----ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHH
Q 043610          346 VIDGSNGFY----KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       346 ~l~~~~G~~----~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~  421 (430)
                      +|.+ .|..    .+. .   .. +.+++.    +++.+.++.|+++||...+|      -|||+.+ .+++.|+++.++
T Consensus       347 ~L~~-~g~~~~~~~i~-~---q~-GmF~~~----gls~e~v~~L~e~~Vy~~~~------gRis~Ag-l~~~ni~~~a~a  409 (420)
T 4h51_A          347 ELLR-LQTPGSWEHVI-N---QI-GMFSFL----GLSKAQCEYCQNHNIFITVS------GRANMAG-LTHETALMLAQT  409 (420)
T ss_dssp             HHHH-TTCSSCCTHHH-H---CC-SSEEEC----CCCHHHHHHHHHTTEECCTT------CEEEGGG-CCHHHHHHHHHH
T ss_pred             HHHH-hCCCCCCCeec-C---CC-ceEEec----CcCHHHHHHHHhCCEEEcCC------CEEEecc-CCHHHHHHHHHH
Confidence            9987 4422    111 1   12 234432    34556778899999987764      2999874 578999999999


Q ss_pred             HHHHHHh
Q 043610          422 MKDFQAK  428 (430)
Q Consensus       422 L~~~~~~  428 (430)
                      |.+++++
T Consensus       410 I~~vvr~  416 (420)
T 4h51_A          410 INDAVRN  416 (420)
T ss_dssp             HHHHHC-
T ss_pred             HHHHHHH
Confidence            9998764

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.71  E-value=6.9e-16  Score=158.29  Aligned_cols=331  Identities=10%  Similarity=0.000  Sum_probs=198.2

Q ss_pred             CCCCceeecCC--C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAG--P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~g--p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.++|..|  .   +-.+|.|++++.+.+.+.. .+.+ +   ...   .+...++.+.|+++++...+ +|+|+ +
T Consensus        52 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~-~---~~~---~~~~~~la~~l~~~~~~~~~-~v~~~-~  121 (476)
T 3i5t_A           52 DGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLP-YASP-W---YMA---TSPAARLAEKIATLTPGDLN-RIFFT-T  121 (476)
T ss_dssp             TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCC-CCCT-T---TCB---CHHHHHHHHHHHTTSSTTCC-EEEEE-S
T ss_pred             CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-Cccc-C---ccC---CHHHHHHHHHHHhcCCCCcC-EEEEe-C
Confidence            34445555554  2   2348999999999887531 1111 0   111   13445778888888876555 77775 7


Q ss_pred             cHHHHHHHHHhhcC--------CCCCcEEEEeCChhHHHHHHHHHHh-CCc-------------eEEecCCCCcCCCCCC
Q 043610          142 GATTQFAAVPLNLC--------TPNDPVDYIVTGSWGDKAFKEAQKF-CNP-------------QVIWSGKAEKYTKIPN  199 (430)
Q Consensus       142 gaT~a~~~~~~sl~--------~~gd~vl~~~~g~~~~~~~~~a~~~-g~~-------------~~v~~~~~~~~g~~~d  199 (430)
                      ||++|++.++..+.        ..+++|++.+.++.+...  .+... +..             ..++...  .+.. .+
T Consensus       122 sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~-~~  196 (476)
T 3i5t_A          122 GGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTA--LTAACTGRTGNWPNFDIAQDRISFLSSPN--PRHA-GN  196 (476)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSH--HHHHTCCCGGGCTTSCCCCTTEEEECCCC--GGGC-TT
T ss_pred             chHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCCh--hhccccCChhhccccCCCCCCcEEeCCCc--cccc-CC
Confidence            89999999887763        225577777666555321  12222 211             1222110  0110 11


Q ss_pred             ----------ccccc--cC----CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccc
Q 043610          200 ----------FDALE--QN----PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDV  253 (430)
Q Consensus       200 ----------~~~l~--i~----~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl  253 (430)
                                +++|+  +.    +++++|++..+++++|.+.+      +|.++ +++|+++|+|++|+ +|-.  .+..
T Consensus       197 ~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~  276 (476)
T 3i5t_A          197 RSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFAS  276 (476)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHH
T ss_pred             CchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceee
Confidence                      44555  32    46788888888888897655      24444 58999999999987 5422  1112


Q ss_pred             c-c----ccEEEeCCCccccC--CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          254 T-R----FGVIYAGAQKNVGP--SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       254 ~-~----~d~~~~s~~K~~gp--~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                      . .    .|+++  +.|.+|.  ..+|++++++++++.+.+....   ... ...+.+ ++.|..++.++.++|+.+.+ 
T Consensus       277 ~~~~~v~pdi~t--~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~---~~~-~~~~~t-~~~np~a~aAa~aaL~~~~~-  348 (476)
T 3i5t_A          277 EKVFGVVPDIIT--FAKGVTSGYVPLGGLAISEAVLARISGENAK---GSW-FTNGYT-YSNQPVACAAALANIELMER-  348 (476)
T ss_dssp             HHTTCCCCSEEE--ECGGGGTTSSCCEEEEECHHHHHTTSGGGCT---TCE-ECCCCT-TTTCHHHHHHHHHHHHHHHH-
T ss_pred             ecccCCCcchhh--hhhhhcCCCcCeEEEEECHHHHHHHhcCCcc---ccc-ccccCC-CCcCHHHHHHHHHHHHHHHh-
Confidence            2 2    25664  4599953  3469999999998865421000   000 001112 35567788888899987754 


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----------hhHHHHHHHHHcCCeecCC
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----------LEAEFVKEAAKEKMVQLKG  395 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~~Gi~~~~g  395 (430)
                         +.+.++.+++.+++++.|.+...+..+. +-.... ..+.+.+.+..           ...++.+.|.++||++.+.
T Consensus       349 ---~~~~~~~~~~~~~l~~~L~~l~~~~~v~-~v~~~G-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~  423 (476)
T 3i5t_A          349 ---EGIVDQAREMADYFAAALASLRDLPGVA-ETRSVG-LVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL  423 (476)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHTTTTSTTEE-EEEEET-TEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEEecC-ceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec
Confidence               3567777888888888887521111110 000112 23445554311           1226778888899998652


Q ss_pred             CCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          396 HRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       396 ~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .   +.+||++...++++|+++++++|++++++
T Consensus       424 g---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~  453 (476)
T 3i5t_A          424 G---DLCVISPPLIISRAQIDEMVAIMRQAITE  453 (476)
T ss_dssp             T---TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             C---CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            1   57999988889999999999999998764

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.70  E-value=2.2e-16  Score=159.42  Aligned_cols=323  Identities=10%  Similarity=-0.016  Sum_probs=190.4

Q ss_pred             CCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.++|..|-.     ..+|.|++++.+.+.+....        .+..   ....++++.|+++++ ..+ +++|+ +
T Consensus        51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~--------~~~~---~~~~~l~~~la~~~~-~~~-~v~~~-~  116 (429)
T 3k28_A           51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSF--------GAPT---EIENKLAKLVIERVP-SIE-IVRMV-N  116 (429)
T ss_dssp             TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCC--------SSCC---HHHHHHHHHHHHHST-TCS-EEEEE-S
T ss_pred             CCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCc--------CCCC---HHHHHHHHHHHHhCC-CCC-EEEEe-C
Confidence            3445555665432     25899999999988652110        0111   234467788888886 343 77775 7


Q ss_pred             cHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCC------------CCCccccc--
Q 043610          142 GATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK------------IPNFDALE--  204 (430)
Q Consensus       142 gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~------------~~d~~~l~--  204 (430)
                      |+|++++.++..+.  .++++|++...++.+.... .....| ....+....  ..+.            ..|+++++  
T Consensus       117 ~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~-~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~  193 (429)
T 3k28_A          117 SGTEATMSALRLARGYTGRNKILKFIGCYHGHGDS-LLIKAGSGVATLGLPD--SPGVPEGVAKNTITVAYNDLESVKYA  193 (429)
T ss_dssp             SHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGG-GCSSCCTTC-----CC--CTTCCHHHHTTEEEEETTCHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHH-HHHhcCCcccccCCCC--cCCCCCcccCceeecCCCCHHHHHHH
Confidence            89999999887654  3567788777665443110 000112 121111110  0010            01556665  


Q ss_pred             cC---CCccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCcCCC--Cccccccc----cEEEeCCCcccc
Q 043610          205 QN---PDAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSNFCS--KPVDVTRF----GVIYAGAQKNVG  268 (430)
Q Consensus       205 i~---~~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s~G~--~~idl~~~----d~~~~s~~K~~g  268 (430)
                      +.   +++++|++..+++.+|.+.+  +    |.++ +++|+++|+|++|.--.  .....+.+    |++  +++|.+|
T Consensus       194 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~  271 (429)
T 3k28_A          194 FEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLT--CLGKVIG  271 (429)
T ss_dssp             HHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EECGGGG
T ss_pred             HHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCcee--hhhhhhc
Confidence            33   46777888777778888876  2    4444 58999999999986111  11111111    444  5679996


Q ss_pred             -CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Q 043610          269 -PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI  347 (430)
Q Consensus       269 -p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l  347 (430)
                       ...+|++++++++++.+.+..+.+.        +. .++.|..++.++.++|+.+    . ++..++.+++++++++.|
T Consensus       272 ~G~~iG~~~~~~~~~~~~~~~~~~~~--------~~-t~~~~~~a~aaa~aal~~~----~-~~~~~~~~~~~~~l~~~L  337 (429)
T 3k28_A          272 GGLPVGAYGGKAEIMRQVAPSGPIYQ--------AG-TLSGNPLAMAAGYETLVQL----T-PESYVEFERKAEMLEAGL  337 (429)
T ss_dssp             TTSCCEEEEECHHHHTTBTTTSSBCC--------CC-TTTTCHHHHHHHHHHHHTC----C-HHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEcHHHHhhhccCCCccc--------cC-CCCCChHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHH
Confidence             3348999999999887543211111        11 1356777777777787743    2 677888888888888888


Q ss_pred             HccCC-ceecCCCCCCCccceEEEEcCCC------------ch-hHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHH
Q 043610          348 DGSNG-FYKCPVEKSVRSFMNVPFTLEKS------------DL-EAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLA  413 (430)
Q Consensus       348 ~~~~G-~~~~~~~~~~rs~~iv~f~~~~~------------~~-~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~e  413 (430)
                      .+..+ +.... ...... ..+.+.+.+.            .. ..++.+.|.++||.+.++.  .+.+|+++  .++++
T Consensus       338 ~~~~~~~~~~~-~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~r~~~--~~t~e  411 (429)
T 3k28_A          338 RKAAEKHGIPH-HINRAG-SMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPPSQ--FEGLFLST--VHSDA  411 (429)
T ss_dssp             HHHHHHTTCCC-EEEEET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST--TSCBCCCT--TCCHH
T ss_pred             HHHHhhCCCCE-EEEeec-cEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEecCC--CCCEEEEC--CCCHH
Confidence            76310 01100 000112 2344554321            11 1368888889999987642  34688865  56999


Q ss_pred             HHHHHHHHHHHHHHh
Q 043610          414 GVEKLVAFMKDFQAK  428 (430)
Q Consensus       414 dv~~ll~~L~~~~~~  428 (430)
                      |+++++++|++++++
T Consensus       412 ~i~~~l~~l~~~l~~  426 (429)
T 3k28_A          412 DIEATIAAAEIAMSK  426 (429)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998875

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.69  E-value=1.1e-16  Score=162.00  Aligned_cols=246  Identities=11%  Similarity=0.094  Sum_probs=161.3

Q ss_pred             HHHHHHHHHHHhCCCCCcEEE--EEeCcHHHHHHHHHhhcCCCCCcEEEEe-CChhHHH-HH-------HHHHHhC-Cce
Q 043610          117 IEKAESDLRALLNIPQEYSVL--FLQGGATTQFAAVPLNLCTPNDPVDYIV-TGSWGDK-AF-------KEAQKFC-NPQ  184 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv--~~~~gaT~a~~~~~~sl~~~gd~vl~~~-~g~~~~~-~~-------~~a~~~g-~~~  184 (430)
                      .+++++.+++++|++..  .+  ++ +|||+|+..++.++++|||+|++.. ..+.+.. ..       ..++..| +++
T Consensus        67 ~~~l~~~la~~~g~~~~--~~~i~~-~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~  143 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAG--LVRPQI-ISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN  143 (431)
T ss_dssp             HHHHHHHHHHHTTCSEE--CCBTTS-CSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred             HHHHHHHHHHHhCCCcc--ccccee-eCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence            66889999999999752  22  13 3679999999999999999998766 3443321 11       1123456 666


Q ss_pred             EEecCCCCcCCCCCCccccc--cCCCccEEEEee-cCCCccccCC-----CCccc-cC--CCcEEEEeccCcCCCCcccc
Q 043610          185 VIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA-NETIHGVEFK-----EYPSA-KN--STGILVADMSSNFCSKPVDV  253 (430)
Q Consensus       185 ~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~-~~t~tG~~~p-----ei~~~-~~--~g~~lvvD~a~s~G~~~idl  253 (430)
                      .++..+   .+ .+|+++++  +++++++|++++ ++|++|...+     +|.++ ++  +|+++++|++++.+....+.
T Consensus       144 ~v~~~~---~~-~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~  219 (431)
T 3ht4_A          144 AVPLTE---GG-LVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP  219 (431)
T ss_dssp             ECCBCT---TS-SBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG
T ss_pred             EeCCCC---CC-CcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc
Confidence            666543   22 57888887  788999999995 6777777666     45554 57  89999999999877643222


Q ss_pred             c--cccEEEeCCCccc-c---CCccEEEEEcHHHHhccCC--CCCccccccchhhcCCCCC-CccHHHHHHHHHHHHHHH
Q 043610          254 T--RFGVIYAGAQKNV-G---PSGVTIVIVRKDLLGNAQD--KTPLMLDYKIHDENNSLYN-TPPCYCIYMCGLVFEYLL  324 (430)
Q Consensus       254 ~--~~d~~~~s~~K~~-g---p~G~g~l~v~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~-T~~~~~~~a~~~al~~l~  324 (430)
                      .  ..|+++.|++|++ |   |+| |+++.++++++.+..  ..+. +        +...+ ++.  ..+.+...++.  
T Consensus       220 ~~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~~~~~~~-~--------g~~~~~~~~--~~~~~~~~l~~--  285 (431)
T 3ht4_A          220 CHVGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAYRLTSPG-I--------GAEAGASLY--SLQEMYQGFFL--  285 (431)
T ss_dssp             GGTTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHHHHSCTT-T--------TTSCSCCCS--CSHHHHHHHHH--
T ss_pred             cccCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHHHhccCC-c--------ccccCccHH--HHHHHHhHhhh--
Confidence            2  2489999999996 2   778 999999998876532  1110 0        00111 111  11223333332  


Q ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHc
Q 043610          325 ELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKE  388 (430)
Q Consensus       325 ~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~  388 (430)
                          +..+.++..+.+.++.+.|++ .|+++.+.....+...+++|.+++...-.+|++.|.+.
T Consensus       286 ----~~~~~~~~~~~a~~l~~~L~~-~g~~v~p~~~~~~~~li~~i~l~~~~~~~~~~~~l~~~  344 (431)
T 3ht4_A          286 ----APHVAGQALKGAIFTAAFLEK-LGMNTSPAWNAPRTDLIQSVQFDDKDRMIAFCQAIQYA  344 (431)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHH-HTCCEESCTTSCCSSSCCEEECCCHHHHHHHHHHHHHT
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHh-CcCEecCCCCCCCccEEEEEEeCCHHHHHHHHHHHHhc
Confidence                345677788888899999986 67777553222345557778887422112688888775

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.69  E-value=1.7e-15  Score=152.86  Aligned_cols=324  Identities=7%  Similarity=-0.056  Sum_probs=187.0

Q ss_pred             CCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.|.+|-.     -.+|.|++++.+.+.+....       ....    ....++++.|+++++ ..+ +++|+ +
T Consensus        51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~-------~~~~----~~~~~la~~l~~~~~-~~~-~v~~~-~  116 (429)
T 4e77_A           51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSF-------GAPT----EMEVKMAQLVTDLVP-TMD-MVRMV-N  116 (429)
T ss_dssp             TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC-------SSCC----HHHHHHHHHHHHHST-TCS-EEEEE-S
T ss_pred             CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCccc-------CCCC----HHHHHHHHHHHhhCC-CCC-EEEEe-C
Confidence            3445555665442     14899999999988642110       0111    344577888888887 343 77775 7


Q ss_pred             cHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHh-CCce-EEecCCCC--cCC------CCCCccccc--cC-
Q 043610          142 GATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKF-CNPQ-VIWSGKAE--KYT------KIPNFDALE--QN-  206 (430)
Q Consensus       142 gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~-g~~~-~v~~~~~~--~~g------~~~d~~~l~--i~-  206 (430)
                      |+|++++.++....  .++++|++...++.+.......... +... ..+....-  ...      ...|+++++  +. 
T Consensus       117 sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~  196 (429)
T 4e77_A          117 SGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQ  196 (429)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHh
Confidence            89999999877432  3466777766665553211111000 1000 00100000  000      011556665  32 


Q ss_pred             --CCccEEEEeecCCCccccCC-C--C---ccc-cCCCcEEEEeccCc---CCCCccccccc----cEEEeCCCcccc-C
Q 043610          207 --PDAKYLHICANETIHGVEFK-E--Y---PSA-KNSTGILVADMSSN---FCSKPVDVTRF----GVIYAGAQKNVG-P  269 (430)
Q Consensus       207 --~~~~lv~i~~~~t~tG~~~p-e--i---~~~-~~~g~~lvvD~a~s---~G~~~idl~~~----d~~~~s~~K~~g-p  269 (430)
                        +++++|++..+++.+|.+.+ +  +   .++ +++|+++|+|++|+   .|.. ...+.+    |++  +++|.+| .
T Consensus       197 ~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~-~~~~~~~~~pdi~--t~sK~~~~G  273 (429)
T 4e77_A          197 YPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALA-GAQDYYHVIPDLT--CLGKIIGGG  273 (429)
T ss_dssp             STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTT-CHHHHTTCCCSEE--EEEGGGGTT
T ss_pred             cCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcc-hHHHhcCCCCCee--eecccccCC
Confidence              46777777766777788877 2  4   443 58999999999998   3321 112222    454  6679996 2


Q ss_pred             CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Q 043610          270 SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG  349 (430)
Q Consensus       270 ~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~  349 (430)
                      ..+|+++.++++++.+.+....+.        + ..++.|...+.++.++|+.+.+    +...++.+++.+++++.|.+
T Consensus       274 ~~~G~~~~~~~~~~~l~~~~~~~~--------~-~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~  340 (429)
T 4e77_A          274 MPVGAFGGRREVMNALAPTGPVYQ--------A-GTLSGNPIAMAAGFACLTEISQ----VGVYETLTELTDSLATGLRH  340 (429)
T ss_dssp             SCCEEEEECHHHHTTBTTTSSBCC-----------CCCCCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEECHHHHHHhccCCCccc--------c-CCCCCCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHH
Confidence            247999999999887543111110        1 1135778888888899987642    35566666677777776664


Q ss_pred             c---CCceecCCCCCCCccceEEEEcCCCc-------------hh-HHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCH
Q 043610          350 S---NGFYKCPVEKSVRSFMNVPFTLEKSD-------------LE-AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL  412 (430)
Q Consensus       350 ~---~G~~~~~~~~~~rs~~iv~f~~~~~~-------------~~-~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~  412 (430)
                      .   .++...   ..... ..+.+.+++..             .. .++.+.|.++||.+.++..  ..+|+  ...+++
T Consensus       341 ~~~~~~~~~~---~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~--~~~~t~  412 (429)
T 4e77_A          341 AAKEENIPLV---VNHVG-GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSAF--EAGFM--SLAHSN  412 (429)
T ss_dssp             HHHHTTCCCE---EEEET-TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSSTT--SCEEC--CTTCCH
T ss_pred             HHHhCCCceE---EEEee-eEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecCC--CCEEE--eccCCH
Confidence            2   222111   11112 34556665421             11 3688889899999876531  23555  456799


Q ss_pred             HHHHHHHHHHHHHHHh
Q 043610          413 AGVEKLVAFMKDFQAK  428 (430)
Q Consensus       413 edv~~ll~~L~~~~~~  428 (430)
                      +|+++++++|++++++
T Consensus       413 e~i~~~l~~l~~~l~~  428 (429)
T 4e77_A          413 EDIQKTVNAARRCFAK  428 (429)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998764

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.68  E-value=1.3e-15  Score=153.51  Aligned_cols=313  Identities=12%  Similarity=0.007  Sum_probs=190.1

Q ss_pred             CCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .+..++|..|-     +..++.|++++.+.+.+.  ...      .+.   .+..+++++.|+++++ ..+ +|+++ +|
T Consensus        51 g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~------~~~---~~~~~~l~~~l~~~~~-~~~-~v~~~-~~  116 (424)
T 2e7u_A           51 GNRYLDYVMSWGPLILGHAHPKVLARVRETLERG--LTF------GAP---SPLEVALAKKVKRAYP-FVD-LVRFV-NS  116 (424)
T ss_dssp             CCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTC--SCC------SSC---CHHHHHHHHHHHHHCT-TCC-EEEEE-SS
T ss_pred             CCEEEEccccccccccCCCCHHHHHHHHHHHHhC--CCC------CCC---CHHHHHHHHHHHHhCC-CCC-EEEEe-CC
Confidence            34455665542     235889999999988641  110      011   1344577888888886 444 77775 78


Q ss_pred             HHHHHHHHHhh--cCCCCCcEEEEeCChhHHHHHHHHHH--------------hC-C----ceEEecCCCCcCCCCCCcc
Q 043610          143 ATTQFAAVPLN--LCTPNDPVDYIVTGSWGDKAFKEAQK--------------FC-N----PQVIWSGKAEKYTKIPNFD  201 (430)
Q Consensus       143 aT~a~~~~~~s--l~~~gd~vl~~~~g~~~~~~~~~a~~--------------~g-~----~~~v~~~~~~~~g~~~d~~  201 (430)
                      +++|+..++..  .+.++++|++.+.++.+...  .+..              .| .    ..++..    ++   .|++
T Consensus       117 g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~--~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~----~~---~d~~  187 (424)
T 2e7u_A          117 GTEATMSALRLARGYTGRPYIVKFRGNYHGHAD--GLLVEAGSGALTLGVPSSAGVPEEYAKLTLVL----EY---NDPE  187 (424)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCG--GGSEECCSSSCCBCEESSTTCCHHHHTTEEEE----CT---TCHH
T ss_pred             HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcH--HHHHhcCCcccccCCCCCCCCCCccCCceEeC----CC---CCHH
Confidence            99999988775  13345778877766544211  0100              01 0    011111    01   3566


Q ss_pred             ccc--cC---CCccEEEEeecCCCccccCC------CCccccCCCcEEEEeccCc-CCC-Ccccccc----ccEEEeCCC
Q 043610          202 ALE--QN---PDAKYLHICANETIHGVEFK------EYPSAKNSTGILVADMSSN-FCS-KPVDVTR----FGVIYAGAQ  264 (430)
Q Consensus       202 ~l~--i~---~~~~lv~i~~~~t~tG~~~p------ei~~~~~~g~~lvvD~a~s-~G~-~~idl~~----~d~~~~s~~  264 (430)
                      +++  +.   +++++|++..+++++|.+.|      +|.+++++|+++|+|++|+ +.. ....++.    .|++  +++
T Consensus       188 ~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~s  265 (424)
T 2e7u_A          188 GLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEAKAYGVLLIADEVMTGFRLAFGGATELLGLKPDLV--TLG  265 (424)
T ss_dssp             HHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHGGGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EEC
T ss_pred             HHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHcCCEEEEecCccccccchhHHHHHhCCCcchh--hhh
Confidence            666  43   45677777666666998775      2444457899999999998 311 1111111    2544  778


Q ss_pred             ccccC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043610          265 KNVGP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELL  343 (430)
Q Consensus       265 K~~gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l  343 (430)
                      |++|+ ..+|++++++++++.+.+....+        .+.+ ++.|...+.++.++|+.+.+   .+++.++.+++++++
T Consensus       266 K~l~~G~~~G~~~~~~~~~~~~~~~~~~~--------~~~t-~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~l  333 (424)
T 2e7u_A          266 KILGGGLPAAAYAGRREIMEKVAPLGPVY--------QAGT-LSGNPLAMAAGLATLELLEE---NPGYYAYLEDLGARL  333 (424)
T ss_dssp             GGGGTTSSCEEEEECHHHHTTBTTTSSBC--------CCCT-TCSCHHHHHHHHHHHHHHHH---CTHHHHHHHHHHHHH
T ss_pred             hhhhCCcceEEEEEcHHHHhhhcccCCcc--------cCCC-CCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHH
Confidence            99974 12799999999887654311111        0111 24567778888889987753   156788888888999


Q ss_pred             HHHHHcc---CCceecCCCCCCCccceEEEEcCCC------------ch-hHHHHHHHHHcCCeecCCCCCCCeeEEeec
Q 043610          344 YNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKS------------DL-EAEFVKEAAKEKMVQLKGHRSVGGMRASIY  407 (430)
Q Consensus       344 ~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~------------~~-~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~  407 (430)
                      ++.|++.   .++... +.  ..+ ..+.+.+++.            .. ..++.+.|.++||.+.++..  ..+|++  
T Consensus       334 ~~~L~~~~~~~~~~~~-~~--~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~~--  405 (424)
T 2e7u_A          334 EAGLKEVLKEKGLPHT-VN--RVG-SMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF--EAAFLS--  405 (424)
T ss_dssp             HHHHHHHHHHTTCCCE-EE--EET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS--SCEECC--
T ss_pred             HHHHHHHHHhCCCceE-EE--eec-eEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC--CceEee--
Confidence            9888763   243211 01  123 3456676531            11 22688888889999877532  235655  


Q ss_pred             CCCCHHHHHHHHHHHHHH
Q 043610          408 NAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       408 ~~~t~edv~~ll~~L~~~  425 (430)
                      ..++++|+++++++|+++
T Consensus       406 ~~~t~~~i~~~l~~l~~~  423 (424)
T 2e7u_A          406 VAHREEDVEKTLEALRKA  423 (424)
T ss_dssp             TTCCHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHh
Confidence            567999999999999875

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.67  E-value=7.4e-16  Score=157.88  Aligned_cols=329  Identities=8%  Similarity=-0.010  Sum_probs=190.3

Q ss_pred             CCCCceeecCCC-----CCCcHHHHHHHHHHhhhc-cCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           67 QEDRVFNFAAGP-----ANLPEKVLLKAQSELYNW-RGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      ..++.++|..|-     +.-+|.|++++.+.+... ...+. .+  ++.  ...+..+++.+.|+++++...+ +|+|+ 
T Consensus        61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~-~~--~~~--~~~~l~~~la~~l~~~~~~~~~-~v~f~-  133 (472)
T 1ohv_A           61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRP-AL--GIL--PPENFVEKLRESLLSVAPKGMS-QLITM-  133 (472)
T ss_dssp             TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCC-CT--TTS--CBTTHHHHHHHTGGGGCCTTCC-EEEEE-
T ss_pred             CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccc-cc--ccc--cHHHHHHHHHHHHHHhCCCCcC-EEEEe-
Confidence            344455554432     224889999999876432 11121 11  110  1122334455555556654444 77775 


Q ss_pred             CcHHHHHHHHHhhcC-------------------------CCC---CcEEEEeCChhHHHHHHHH-------HHhC-Cc-
Q 043610          141 GGATTQFAAVPLNLC-------------------------TPN---DPVDYIVTGSWGDKAFKEA-------QKFC-NP-  183 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~-------------------------~~g---d~vl~~~~g~~~~~~~~~a-------~~~g-~~-  183 (430)
                      +||++|++.++..+.                         .||   ++|++++.++.+....-..       +..+ .. 
T Consensus       134 ~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~  213 (472)
T 1ohv_A          134 ACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSF  213 (472)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCC
T ss_pred             CCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCC
Confidence            789999998876652                         145   7888777655443211000       0112 10 


Q ss_pred             --eEEecCCC-CcCCC---------CCCccccc--cCC------CccEEEEeecCCCccccCC------CCccc-cCCCc
Q 043610          184 --QVIWSGKA-EKYTK---------IPNFDALE--QNP------DAKYLHICANETIHGVEFK------EYPSA-KNSTG  236 (430)
Q Consensus       184 --~~v~~~~~-~~~g~---------~~d~~~l~--i~~------~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~  236 (430)
                        ..++.... -+...         ..|+++|+  +++      ++++|++..+++++|.+.|      +|.++ +++|+
T Consensus       214 ~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~  293 (472)
T 1ohv_A          214 DWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGC  293 (472)
T ss_dssp             CCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTC
T ss_pred             CCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCC
Confidence              11121100 00000         11455665  444      7899999888888998766      34554 58999


Q ss_pred             EEEEeccCc-CCCCc--ccccc------ccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCC
Q 043610          237 ILVADMSSN-FCSKP--VDVTR------FGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT  307 (430)
Q Consensus       237 ~lvvD~a~s-~G~~~--idl~~------~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T  307 (430)
                      ++++|++|+ +|...  +.++.      .|++  +++|++ ..| |+++ ++++ ..   ..+..        .+.+ .+
T Consensus       294 lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~-l~G-G~~~-~~~~-~~---~~~~~--------~~~T-~~  355 (472)
T 1ohv_A          294 AFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKM-MTG-GFFH-KEEF-RP---NAPYR--------IFNT-WL  355 (472)
T ss_dssp             EEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGG-SSE-EEEE-CGGG-SC---SSSSS--------SCCS-SS
T ss_pred             EEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccc-ccC-CccC-chhh-cc---ccccc--------ccCc-cC
Confidence            999999998 55432  23332      3554  556994 224 6655 5544 11   11110        0111 23


Q ss_pred             ccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-Cce-ecCCCCCCCccceEEEEcCCCchhHHHHHHH
Q 043610          308 PPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFY-KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA  385 (430)
Q Consensus       308 ~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~-~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L  385 (430)
                      .|...++++.++|+.+.+    +.+.++.++++++++++|.+.. ++. .+. ...... .++.|.+++.....++.+.|
T Consensus       356 ~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~-~~~~~g-~~~~~~~~~~~~~~~~~~~l  429 (472)
T 1ohv_A          356 GDPSKNLLLAEVINIIKR----EDLLSNAAHAGKVLLTGLLDLQARYPQFIS-RVRGRG-TFCSFDTPDESIRNKLISIA  429 (472)
T ss_dssp             SCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHHHHCTTTCE-EEEEET-TEEEEECSSHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHHHhhCCCcEE-eecCCc-eEEEEEeCChhHHHHHHHHH
Confidence            567788888899998764    2467888888888888887631 121 010 000122 34556665311123688889


Q ss_pred             HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          386 AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       386 ~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .++||.+.++.  .+.|||++...++++||+++++.|++++++
T Consensus       430 ~~~Gv~~~~~g--~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  470 (472)
T 1ohv_A          430 RNKGVMLGGCG--DKSIRFRPTLVFRDHHAHLFLNIFSDILAD  470 (472)
T ss_dssp             HHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HHCCeEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            88999987632  357999999999999999999999998764

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.66  E-value=5.1e-15  Score=146.97  Aligned_cols=348  Identities=14%  Similarity=0.102  Sum_probs=207.8

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHH-HHHHHHHHHhCCCCCcE-EEEEeCcHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIE-KAESDLRALLNIPQEYS-VLFLQGGATTQ  146 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~-~~r~~la~l~g~~~~~~-vv~~~~gaT~a  146 (430)
                      .+.+.+.+.--.+++.|++++...+.+-...|.-. ...+.+-++.+.+| -+.+..+++||++.... |=+-.-||+.|
T Consensus        54 ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg-~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~A  132 (490)
T 3ou5_A           54 CRGLELIASENFCSRAALEALGSCLNNKYSEGYPG-KRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA  132 (490)
T ss_dssp             HHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC-----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred             HcCceEecCCCcCCHHHHHHhcCcccccccCCCCC-ccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHH
Confidence            35778888888899999999998887644444311 12222445555555 44677889999985421 22235689999


Q ss_pred             HHHHHhhcCCCCCcEEEEeC---ChhHHHHHHHHHH---hC-CceEEecCCCCcCCCCCCccccc---cCCCccEEEEee
Q 043610          147 FAAVPLNLCTPNDPVDYIVT---GSWGDKAFKEAQK---FC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICA  216 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~---g~~~~~~~~~a~~---~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~  216 (430)
                      +.+++.++++|||+|+-++.   ||.++.......+   .| -...++..-+.+.+ .+|.|+++   ...++|+|++-.
T Consensus       133 N~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~-~IDyd~~~~~A~~~kPklIi~G~  211 (490)
T 3ou5_A          133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG-LIDYNQLALTARLFRPRLIIAGT  211 (490)
T ss_dssp             HHHHHHHHCC-CCCEECBC----------------------------CBCEETTTT-EECHHHHHHHHHHHCCSEEEECC
T ss_pred             HHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCC-cccHHHHHHHHhhcCCCeEEECC
Confidence            99999999999999986543   3333321110111   12 11122221111233 58888886   345788888864


Q ss_pred             cCCCccccCC--CCccc-cCCCcEEEEeccCcCC-----CCccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCC
Q 043610          217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFC-----SKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD  287 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G-----~~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~  287 (430)
                        +..-..+|  ++.++ .+.|+++++|++|-.|     ..|-.+.-.|+++++.||.| ||.| |+++.+++.... .+
T Consensus       212 --SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~~-~~  287 (490)
T 3ou5_A          212 --SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKAV-DP  287 (490)
T ss_dssp             --SSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSCSC-EEEEEECSEEEE-CC
T ss_pred             --ccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCCCc-eEEEeccccccc-cc
Confidence              32344555  56666 5889999999998544     44444555699999999999 8999 998887653211 00


Q ss_pred             CC--Cccccccchhhc---CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          288 KT--PLMLDYKIHDEN---NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       288 ~~--p~~~~~~~~~~~---~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      ..  ....++....+.   ....|.|-...+++.+.+|...... .+.+-.+...+.++.|.+.|.+ .|+.++. . ..
T Consensus       288 k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p-~fk~Ya~qVv~NAkaLA~~L~~-~G~~vvs-G-gT  363 (490)
T 3ou5_A          288 KTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP-MFREYSLQVLKNARAMADALLE-RGYSLVS-G-GT  363 (490)
T ss_dssp             --CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-G-SC
T ss_pred             cccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHh-CCCeeec-C-CC
Confidence            00  000111111111   1122556666677777777654422 3566777777888888899986 8999874 1 11


Q ss_pred             CccceEEEEcCCCchhH-HHHHHHHHcCCeec----CCCCC---CCeeEEeecC----CCCHHHHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQL----KGHRS---VGGMRASIYN----AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~----~g~~~---~g~iRis~~~----~~t~edv~~ll~~L~~~~~  427 (430)
                      .+ +.+.+.+.+.+... +..+.|.+.||.+-    |+.++   .++|||+.-.    -..++|++++.++|.+.+.
T Consensus       364 dn-HlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~  439 (490)
T 3ou5_A          364 DN-HLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             SS-SEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             Cc-eEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            22 45666765434444 56667888999853    33322   3579999644    3468999999999887653

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.64  E-value=1.1e-14  Score=148.11  Aligned_cols=313  Identities=11%  Similarity=-0.016  Sum_probs=184.4

Q ss_pred             CCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcH
Q 043610           69 DRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGA  143 (430)
Q Consensus        69 ~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~ga  143 (430)
                      +..++|..|-     +..++.|++++.+.+.+..  ..      ..   ..+..+++.+.++++++ ..+ +|+++ +|+
T Consensus        57 ~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~------~~---~~~~~~~la~~l~~~~~-~~~-~v~~~-~gg  122 (453)
T 2cy8_A           57 NVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QY------AA---SHPLEVRWAERIVAAFP-SIR-KLRFT-GSG  122 (453)
T ss_dssp             CEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SS------CS---SCHHHHHHHHHHHHHCT-TCS-EEEEE-SCH
T ss_pred             CEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CC------CC---CCHHHHHHHHHHHhhCC-CCC-EEEEe-CCH
Confidence            4455665552     2368899999999885411  10      11   12345577778888876 444 77775 789


Q ss_pred             HHHHHHHHhh---cCCCCCcEEEEeCChhHHHHHHH--H-H------HhC-Cc----eEEecCCCCcCCCCCCccccc--
Q 043610          144 TTQFAAVPLN---LCTPNDPVDYIVTGSWGDKAFKE--A-Q------KFC-NP----QVIWSGKAEKYTKIPNFDALE--  204 (430)
Q Consensus       144 T~a~~~~~~s---l~~~gd~vl~~~~g~~~~~~~~~--a-~------~~g-~~----~~v~~~~~~~~g~~~d~~~l~--  204 (430)
                      ++|++.++..   +.+ +++|++++..+.+......  . .      ..| ..    .++..    ++   .|+++++  
T Consensus       123 ~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~---~d~~~le~~  194 (453)
T 2cy8_A          123 TETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI----RP---DDIEGMREV  194 (453)
T ss_dssp             HHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEE----CT---TCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec----CC---CCHHHHHHH
Confidence            9999998887   444 5678877766554321100  0 0      012 10    11111    11   3666776  


Q ss_pred             cC---CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCC---cccccc----ccEEEeCCCccc
Q 043610          205 QN---PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSK---PVDVTR----FGVIYAGAQKNV  267 (430)
Q Consensus       205 i~---~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~---~idl~~----~d~~~~s~~K~~  267 (430)
                      +.   +++++|++..+++++|.+.|      +|.++ +++|+++|+|++|+ |..   ...++.    .|++  +++|++
T Consensus       195 l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l  271 (453)
T 2cy8_A          195 FANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT--CLAKAS  271 (453)
T ss_dssp             HHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE--EEEGGG
T ss_pred             HHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE--EEChhh
Confidence            44   46778877776777998765      35554 58999999999997 321   111111    2544  677999


Q ss_pred             cC-CccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHH
Q 043610          268 GP-SGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY-LLELGGLNEVEKMNRKKAELLYN  345 (430)
Q Consensus       268 gp-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~-l~~~~g~~~v~~~~~~l~~~l~~  345 (430)
                      |+ ..+|++++++++++.+.+....     . ...+.+ .+.|...++++.++|+. + .    +.+.++.+++++++++
T Consensus       272 ~~G~~~G~v~~~~~~~~~l~~~~~~-----~-~~~~~t-~~~n~~~~aa~~aal~~~~-~----~~~~~~~~~~~~~l~~  339 (453)
T 2cy8_A          272 AGGLPGGILGGREDVMGVLSRGSDR-----K-VLHQGT-FTGNPITAAAAIAAIDTIL-E----DDVCAKINDLGQFARE  339 (453)
T ss_dssp             GTTSSCEEEEECHHHHTTSSSCC----------------CCCCHHHHHHHHHHHHHHH-H----TTHHHHHHHHHHHHHH
T ss_pred             hCCcceEEEechHHHHHHhccccCC-----C-ceeCCC-CCCCHHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHHHH
Confidence            63 3489999999988765431000     0 000111 34677778888888886 5 3    2456777788888888


Q ss_pred             HHHcc---CCceecCCCCCCCccceEEEEcCC-----C-------------ch-hHHHHHHHHHcCCeecCCCCCCCeeE
Q 043610          346 VIDGS---NGFYKCPVEKSVRSFMNVPFTLEK-----S-------------DL-EAEFVKEAAKEKMVQLKGHRSVGGMR  403 (430)
Q Consensus       346 ~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~-----~-------------~~-~~~~~~~L~~~Gi~~~~g~~~~g~iR  403 (430)
                      .|.+.   .++... ..  ..+ ..+.+.+++     .             .. ..++.+.|.++||.+.++    +.+|
T Consensus       340 ~L~~~~~~~~~~~~-~~--~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~----~~~~  411 (453)
T 2cy8_A          340 AMNHLFARKGLNWL-AY--GRF-SGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR----GSVF  411 (453)
T ss_dssp             HHHHHHHHTTCCEE-EE--CCT-TEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT----TEEE
T ss_pred             HHHHHHhhCCCcEE-EE--Eee-eEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC----CCEE
Confidence            88652   133111 11  123 356666653     1             11 236888888899998543    2366


Q ss_pred             EeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          404 ASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       404 is~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ++  ..++++|+++++++|++++++
T Consensus       412 l~--~~~t~~~i~~~l~~l~~~l~~  434 (453)
T 2cy8_A          412 LS--AQHEREHVEHLVTTFDRVLDR  434 (453)
T ss_dssp             CC--TTCCHHHHHHHHHHHHHHHHH
T ss_pred             ee--ccCCHHHHHHHHHHHHHHHHH
Confidence            54  567999999999999988754

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.54  E-value=1.1e-13  Score=139.41  Aligned_cols=294  Identities=12%  Similarity=0.046  Sum_probs=178.8

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCC----CCcEEEEeCChhHHHHHHHHHHhC-CceE
Q 043610          111 KEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTP----NDPVDYIVTGSWGDKAFKEAQKFC-NPQV  185 (430)
Q Consensus       111 ~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~----gd~vl~~~~g~~~~~~~~~a~~~g-~~~~  185 (430)
                      +....+-+.+..++.+++|.|.....+++ +|+|.+.++++++.+++    ++.|++..+.|.+.  ...+.-.| .++.
T Consensus        94 ~~~~~~e~~~~~~~~~~lGlp~~~~~~lV-~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv--~kAl~l~Gl~p~~  170 (450)
T 3bc8_A           94 SLLNKITNSLVLNVIKLAGVHSVASCFVV-PMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSC--FKSMVTAGFEPVV  170 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTCCEEEEE-SSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHH--HHHHHHTTCEEEE
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCceEEEE-CCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHH--HHHHHHcCCeeEE
Confidence            44556777888999999999976444554 67776666666655443    78888888777663  23344457 7777


Q ss_pred             EecCCCCcCCCCCCccccc--cC--C-CccEEEEeecCCC-ccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-----
Q 043610          186 IWSGKAEKYTKIPNFDALE--QN--P-DAKYLHICANETI-HGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV-----  251 (430)
Q Consensus       186 v~~~~~~~~g~~~d~~~l~--i~--~-~~~lv~i~~~~t~-tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i-----  251 (430)
                      +....+.+.+ .+|++.|+  +.  + +.+.++++++.+. +|.+-|  +|+++ +++|++++||++|..-...+     
T Consensus       171 v~~~~~~~~~-~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~  249 (450)
T 3bc8_A          171 IENVLEGDEL-RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQ  249 (450)
T ss_dssp             ECCEEETTEE-ECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHH
T ss_pred             EEeeecCccC-CcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHH
Confidence            7553211233 47888887  42  2 3445555554443 346666  78886 79999999999987543221     


Q ss_pred             ---ccccccEEEeCCCcccc-CCccEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHh
Q 043610          252 ---DVTRFGVIYAGAQKNVG-PSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLEL  326 (430)
Q Consensus       252 ---dl~~~d~~~~s~~K~~g-p~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~  326 (430)
                         +....|+++.|+|||+. |.|.++++++ ++.++.+..   .|.        +....+|+    +.+..++..+- .
T Consensus       250 ~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~--------g~~s~Sps----L~l~~~l~~~G-~  313 (450)
T 3bc8_A          250 QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYP--------GRASASPS----LDVLITLLSLG-C  313 (450)
T ss_dssp             HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSC--------SCBCSHHH----HHHHHHHHHHH-H
T ss_pred             HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHH---Hhh--------cCCcccHH----HHHHHHHHHHH-H
Confidence               11356899999999995 9999999985 455544311   111        01111222    22233332222 2


Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHccC---CceecCCCCCCCccceEEEEcCC----CchhH-HHHHHHHHcCC---eec--
Q 043610          327 GGLNEVEKMNRKKAELLYNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEK----SDLEA-EFVKEAAKEKM---VQL--  393 (430)
Q Consensus       327 ~g~~~v~~~~~~l~~~l~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~----~~~~~-~~~~~L~~~Gi---~~~--  393 (430)
                      .|+++..++..++++++++.|.+..   |++++.. +....+  ..+.+..    .+.+. ++.-.+...|+   .+.  
T Consensus       314 ~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~-~~~~~~--~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~  390 (450)
T 3bc8_A          314 SGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQT-PHNPIS--LAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPL  390 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCC-TTCSSE--EEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCC-ccCCCc--ceeecccccccccCCCceeEEEecCCCCccceeeec
Confidence            3677788888889999999998765   7777631 111111  2233321    12344 56666766553   222  


Q ss_pred             -----------CCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          394 -----------KGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       394 -----------~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                                 ..+.      ...+|=+.+...++++|+++|+++|+++.+
T Consensus       391 ~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~  441 (450)
T 3bc8_A          391 GNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLN  441 (450)
T ss_dssp             CCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence                       1111      133566666667899999999999998754

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.24  E-value=1.8e-15  Score=154.28  Aligned_cols=318  Identities=10%  Similarity=0.005  Sum_probs=190.4

Q ss_pred             CCCCceeecCCCC--CC---cHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPA--NL---PEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~--~~---~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.++.++|..|..  .+   +|.|++++.+.+.+    +.+     ..  -..+...++.+.|+++++ ..+ .++|+ +
T Consensus        98 dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~----~~~-----~~--~~~~~~~~Lae~L~~~~p-~~~-~v~~~-n  163 (465)
T 2yky_A           98 DGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAV----GLN-----LS--TQTENEALFAEAVCDRFP-SID-LVRFT-N  163 (465)
Confidence            3455666666553  23   78999999888754    111     11  112345577788888885 233 56665 7


Q ss_pred             cHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHHHHH--HHhC-CceEEecCCCCcCCCCCCccccc--cC---CCccE
Q 043610          142 GATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAFKEA--QKFC-NPQVIWSGKAEKYTKIPNFDALE--QN---PDAKY  211 (430)
Q Consensus       142 gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~~~a--~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~---~~~~l  211 (430)
                      ||++|+..++...  ...+++|++++.++.+....-..  ...| ...++..    ++   .|+++|+  ++   +++++
T Consensus       164 SGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~----~~---~d~~~l~~~l~~~~~~~aa  236 (465)
T 2yky_A          164 SGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG----VY---NDVEGTADLLKRHGHDCAA  236 (465)
Confidence            8999999987764  24468888877666564321111  1112 1111221    12   2556666  44   67888


Q ss_pred             EEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCCc--ccccccc--EEEeCCCccccCCc--cEEEEEc
Q 043610          212 LHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSKP--VDVTRFG--VIYAGAQKNVGPSG--VTIVIVR  278 (430)
Q Consensus       212 v~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~~d--~~~~s~~K~~gp~G--~g~l~v~  278 (430)
                      |++..+.+++|.+.|      +|.++ +++|+++++|++|+ +...  .-.+.++  .-+.+++|++|. |  +|+++++
T Consensus       237 vi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg~-G~piG~v~~~  314 (465)
T 2yky_A          237 ILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIGG-GMSFGAFGGR  314 (465)
Confidence            888776677997765      35554 58999999999998 4211  1111111  123467899975 5  7899999


Q ss_pred             HHHHhccCCC--CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccC-Ccee
Q 043610          279 KDLLGNAQDK--TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSN-GFYK  355 (430)
Q Consensus       279 ~~~~~~~~~~--~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~-G~~~  355 (430)
                      +++++.+.+.  .+.+.        +.+ ++.|...++++.++|+.+.+    +.+.++..++.++++++|.+.. .+.+
T Consensus       315 ~~i~~~l~~~~~g~~~~--------~~T-~~~npla~aAa~aaL~~l~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~  381 (465)
T 2yky_A          315 RDLMERFDPARDGAFAH--------AGT-FNNNILTMSAGHAALTQIYT----RQAASDLSASGDRFRANLNRIAVENQA  381 (465)
Confidence            9988765431  11110        011 24566677778888987753    3567788888888888887631 1211


Q ss_pred             cCCCCCCCccceEEEEcCC-C------------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          356 CPVEKSVRSFMNVPFTLEK-S------------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       356 ~~~~~~~rs~~iv~f~~~~-~------------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      .. +-.... ..+.|.+.+ .            ....+|.+.|.++||++.++..  + . ++  ..++++||++++++|
T Consensus       382 ~~-~v~g~G-~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~--~-~-~s--~~~t~edid~~l~~l  453 (465)
T 2yky_A          382 PL-QFTGLG-SLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGM--Y-A-LS--LEIADAGRDAFAEAL  453 (465)
Confidence            10 111122 234454442 0            0122577888889999876431  1 1 44  457999999999999


Q ss_pred             HHHHHh
Q 043610          423 KDFQAK  428 (430)
Q Consensus       423 ~~~~~~  428 (430)
                      ++++++
T Consensus       454 ~~~l~~  459 (465)
T 2yky_A          454 ADFIGE  459 (465)
Confidence            988764

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.43  E-value=3e-12  Score=127.72  Aligned_cols=285  Identities=12%  Similarity=0.034  Sum_probs=178.5

Q ss_pred             HHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCC----CCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcC
Q 043610          120 AESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTP----NDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKY  194 (430)
Q Consensus       120 ~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~----gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~  194 (430)
                      +..+|+.+ |.+.. .-.|+++|+|.++.+++++.+++    +|.|++..+.|.+-  +......| ++++++...+.+ 
T Consensus       122 ~ld~L~~~-G~~~~-~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv--~kAliL~Gl~Pv~V~p~~d~~-  196 (501)
T 3hl2_A          122 VLDIIKLA-GVHTV-ANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSC--FKSMITAGFEPVVIENVLEGD-  196 (501)
T ss_dssp             HHHHHHHT-TCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHH--HHHHHHTTCEEEEECEEEETT-
T ss_pred             HHHHHHHc-CCCCC-CcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHH--HHHHHHcCCeEEEEeeeeccc-
Confidence            34555555 99875 34555688898888888877653    49999988888773  23333457 777776532111 


Q ss_pred             CCCCCccccc--cC---CCccEEEEeecCCCcccc-CC--CCccc-cCCCcEEEEeccCcCCCCcc--------cccccc
Q 043610          195 TKIPNFDALE--QN---PDAKYLHICANETIHGVE-FK--EYPSA-KNSTGILVADMSSNFCSKPV--------DVTRFG  257 (430)
Q Consensus       195 g~~~d~~~l~--i~---~~~~lv~i~~~~t~tG~~-~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--------dl~~~d  257 (430)
                      ...+|++.++  +.   ++..+++++.+++..|.. .|  +|+++ +++|++++||++|..-....        ++...|
T Consensus       197 ~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD  276 (501)
T 3hl2_A          197 ELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID  276 (501)
T ss_dssp             EEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred             ccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence            1246777776  42   244455555544443444 55  77776 69999999999887543221        122368


Q ss_pred             EEEeCCCccc-cCCccEEEEEc-HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610          258 VIYAGAQKNV-GPSGVTIVIVR-KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM  335 (430)
Q Consensus       258 ~~~~s~~K~~-gp~G~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~  335 (430)
                      +++.|.||++ .|-|-++++.+ +++++.+..               .++||.+....+.+..++..+-. .|+.++.++
T Consensus       277 ~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~---------------~yPGr~S~Spsldl~~tLL~lGr-~Gy~~ll~e  340 (501)
T 3hl2_A          277 AFVQSLDKNFMVPVGGAIIAGFNDSFIQEISK---------------MYPGRASASPSLDVLITLLSLGS-NGYKKLLKE  340 (501)
T ss_dssp             EEEEEHHHHHCCCSSCEEEEESCHHHHHHHHH---------------TSCSCBCSHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred             EEEecccccceeecCceEEEeCCHHHHHHHHH---------------hCCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            9999999999 58785666554 456665321               12244444444544444444443 378999999


Q ss_pred             HHHHHHHHHHHHHcc---CCceecCCCCCCCccceEEEEcCCC----chhH-HHHHHHHHcCCe---ec-CC--------
Q 043610          336 NRKKAELLYNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKS----DLEA-EFVKEAAKEKMV---QL-KG--------  395 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~----~~~~-~~~~~L~~~Gi~---~~-~g--------  395 (430)
                      ..++.++++++|++.   .|-+++. .+  ..+.-+.+.+...    +... +|-.+|-..+|-   +. +|        
T Consensus       341 ~~ela~~L~~~L~~la~~~ge~ll~-~~--~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~  417 (501)
T 3hl2_A          341 RKEMFSYLSNQIKKLSEAYNERLLH-TP--HNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGY  417 (501)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCBCC-CT--TCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTE
T ss_pred             HHHHHHHHHHHHHHHHHhcChhhcC-CC--CCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCe
Confidence            999999999999984   3445542 11  1233355555421    1122 567778776554   11 11        


Q ss_pred             ----CC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          396 ----HR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       396 ----~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                          ++      ...++-+....-++++|||.+++.|++++..
T Consensus       418 ~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~  460 (501)
T 3hl2_A          418 TFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKA  460 (501)
T ss_dssp             EESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             eecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence                11      1236888877788999999999999998754

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.20  E-value=3.1e-09  Score=107.94  Aligned_cols=322  Identities=13%  Similarity=0.028  Sum_probs=175.2

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g  158 (430)
                      -+|.|.+++++++.+.....  .  ......    ...++.+.|.+++..+.-..++|+ +|||||++.++.-.  ....
T Consensus        81 ~~p~v~~Ai~~q~~~~~~~~--~--~~~~~~----~~~~lae~L~~~~p~~~~~~v~f~-~sGsEA~e~AlklAr~~t~r  151 (456)
T 4atq_A           81 SDPAVVAAVQEAAAHFTHTC--F--MVTPYE----GYVAVTEQLNRLTPGDHAKRTVLF-NSGAEAVENAVKVARLATGR  151 (456)
T ss_dssp             TCHHHHHHHHHHHHHCSCCT--T--TTSCCH----HHHHHHHHHHHHSSCSSCEEEEEE-SSHHHHHHHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHHHHhhccCcc--c--CccCcH----HHHHHHHHHHHhCCCCCCcEEEEe-CChHHHHHHHHHHHhhhhcC
Confidence            47899999999887532110  0  111111    222455667777754432256665 78999999876543  2334


Q ss_pred             CcEEEEeCChhHHHHHHHHHH---------hC----CceEEecCCCCc--CCCCCCcccc-------c--cC-CCccEEE
Q 043610          159 DPVDYIVTGSWGDKAFKEAQK---------FC----NPQVIWSGKAEK--YTKIPNFDAL-------E--QN-PDAKYLH  213 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~---------~g----~~~~v~~~~~~~--~g~~~d~~~l-------~--i~-~~~~lv~  213 (430)
                      .+++.+..++.|.-..-....         .+    .+..++...+..  ..+..+.+.+       +  +. +++..|+
T Consensus       152 ~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvi  231 (456)
T 4atq_A          152 DAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAII  231 (456)
T ss_dssp             CEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred             CeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEE
Confidence            567766666555311111100         01    122233221100  0000111111       1  12 2455566


Q ss_pred             EeecCCCccccCC------CCccc-cCCCcEEEEeccCcC-CCC--ccccccc----cEEEeCCCcccc--CCccEEEEE
Q 043610          214 ICANETIHGVEFK------EYPSA-KNSTGILVADMSSNF-CSK--PVDVTRF----GVIYAGAQKNVG--PSGVTIVIV  277 (430)
Q Consensus       214 i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~-G~~--~idl~~~----d~~~~s~~K~~g--p~G~g~l~v  277 (430)
                      +=-+....|++.|      ++.++ +++|+++|+|++|.- |-.  .+-.+.+    |+++.+  |.+|  .+ +|.+.+
T Consensus       232 vEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P-~~av~~  308 (456)
T 4atq_A          232 IEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLP-LSAITG  308 (456)
T ss_dssp             ECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSS-CEEEEE
T ss_pred             eccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhh--hcccCcCC-ceeeEe
Confidence            6445666788877      24554 599999999999873 321  1222222    777665  7773  32 688888


Q ss_pred             cHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---CCce
Q 043610          278 RKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---NGFY  354 (430)
Q Consensus       278 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~G~~  354 (430)
                      ++++.+...+   ..        .+.++ +-|..+..++.++|+.++++ +   +.++.+++.+++++.|++.   ....
T Consensus       309 ~~~i~~~~~~---~~--------~~~Tf-~gnpla~aaala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l~~~~~~~  372 (456)
T 4atq_A          309 RADLLDAVHP---GG--------LGGTY-GGNPVACAAALAAIDTMEQH-D---LNGRARHIEELALGKLRELAAELSAG  372 (456)
T ss_dssp             EHHHHTTSCT---TS--------SCCSS-SSCHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred             cHHHHhcccc---cC--------CCCCC-CCChHHHHhhHHHHHHHhhc-c---HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9998775432   11        12233 34666778888899988753 3   4555566666666666542   1100


Q ss_pred             ecCCCCCCCc-cceEEEEcCCC-------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          355 KCPVEKSVRS-FMNVPFTLEKS-------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       355 ~~~~~~~~rs-~~iv~f~~~~~-------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      ..+.-.+.|. ...+.+.+.+.       ....++...+.++|+++.........||+.+-...|++|++++++.|++.+
T Consensus       373 ~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al  452 (456)
T 4atq_A          373 GGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAI  452 (456)
T ss_dssp             ---CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             cCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            0000001121 12334444211       112257788889999875421123469999988889999999999999999


Q ss_pred             HhhC
Q 043610          427 AKHA  430 (430)
Q Consensus       427 ~~~~  430 (430)
                      +.+|
T Consensus       453 ~a~A  456 (456)
T 4atq_A          453 KAHA  456 (456)
T ss_dssp             HHC-
T ss_pred             HhhC
Confidence            8875

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.17  E-value=1.6e-10  Score=117.11  Aligned_cols=316  Identities=12%  Similarity=0.049  Sum_probs=175.7

Q ss_pred             CCCCCceeecCC--CCC---CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           66 GQEDRVFNFAAG--PAN---LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        66 ~~~~~~~l~~~g--p~~---~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      .+.++.+.+..|  +..   -+|.|++++.+.+.+....+.      +  ..   ...++.+.|++.+..- + .+.|+ 
T Consensus        84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~------~--~~---~~~~lae~l~~~~p~~-~-~v~f~-  149 (454)
T 4ao9_A           84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTG------H--NL---LEGRLARLICERFPQI-E-QLRFT-  149 (454)
T ss_dssp             TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCS------E--ES---SHHHHHHHHHHHSTTC-S-EEEEE-
T ss_pred             CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccC------C--cH---HHHHHHHHHHHhCCCC-C-EEEEe-
Confidence            344444445444  322   478999999998864211110      0  11   1225566777777532 2 67765 


Q ss_pred             CcHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC----CceEEecCCCCcCCCCCCccccc--c---CCCc
Q 043610          141 GGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTKIPNFDALE--Q---NPDA  209 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~~~d~~~l~--i---~~~~  209 (430)
                      +|||||++.++.-..  ...++|+.+..++.|.... .....+    .......    ++   -|.+.++  +   .+++
T Consensus       150 ~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~-~~~~~~~~~~~~~~~~~----p~---nd~~~l~~~l~~~~~~i  221 (454)
T 4ao9_A          150 NSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLG-FGARPSPTTVPFDFLVL----PY---NDAQTARAQIERHGPEI  221 (454)
T ss_dssp             SSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCB-BSSSBCTTSCCSEEEEE----CT---TCHHHHHHHHHHTGGGE
T ss_pred             CchHHHHHHHHHHHHhcccCCeEEEEeCCcCCcccc-ccccccCccCCCCcccC----CC---chHHHHHHHHhhcCCce
Confidence            789999998766532  2345677666555442100 000001    0111111    12   2334443  2   3566


Q ss_pred             cEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCcCCCCc--ccccc----ccEEEeCCCcccc-CCccEEE
Q 043610          210 KYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSNFCSKP--VDVTR----FGVIYAGAQKNVG-PSGVTIV  275 (430)
Q Consensus       210 ~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~----~d~~~~s~~K~~g-p~G~g~l  275 (430)
                      .+|++--+....|++.|      +|.++ +++|+++|+|+++. |-.-  .-.+.    -|++  +..|.+| -.-+|.+
T Consensus       222 AavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~--t~gK~lggG~Piga~  298 (454)
T 4ao9_A          222 AVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLT--TLGKYIGGGMSFGAF  298 (454)
T ss_dssp             EEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEE--EEEGGGGTTSSCEEE
T ss_pred             EEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEE--EeccccCCCCcceee
Confidence            77777556667788877      35554 58999999999987 4210  10111    2555  4568883 2237888


Q ss_pred             EEcHHHHhccCCC-CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc---C
Q 043610          276 IVRKDLLGNAQDK-TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS---N  351 (430)
Q Consensus       276 ~v~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~---~  351 (430)
                      ..++++.+...+. .+.+.        +.++ +-|.....+..++|+.+.+    +++.++..++.++|+++|++.   .
T Consensus       299 ~~~~ei~~~~~~~~~~~~h--------~~T~-~gnPla~AAala~L~~l~~----~~~~~~~~~~g~~l~~~L~~l~~~~  365 (454)
T 4ao9_A          299 GGRADVMALFDPRTGPLAH--------SGTF-NNNVMTMAAGYAGLTKLFT----PEAAGALAERGEALRARLNALCANE  365 (454)
T ss_dssp             EECHHHHGGGCTTTCSCCC--------CCTT-TTCHHHHHHHHHHHHHTSC----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeHHHHHHHHhhccCCccc--------cCCC-CCCHHHHHHHHHHHHHHhc----cChhHHHHHHHHHHHHHHHHHHhhC
Confidence            9999998876442 12211        1222 3456677777788887653    456677777777777777652   1


Q ss_pred             CceecCCCCCCCccceEEEEcCCC-----------c--hhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610          352 GFYKCPVEKSVRSFMNVPFTLEKS-----------D--LEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       352 G~~~~~~~~~~rs~~iv~f~~~~~-----------~--~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l  418 (430)
                      ++..   +-.... ..+.+.+.+.           +  ....+...|.++||+..+.    +.+.+++  .+|++|||++
T Consensus       366 ~~~~---~vrg~G-~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~----~~~~~s~--~~T~~dId~~  435 (454)
T 4ao9_A          366 GVAM---QFTGIG-SLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPR----GFVVLSL--PLTDADIDRY  435 (454)
T ss_dssp             TBSC---EEEEET-TEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTT----CEEECCT--TCCHHHHHHH
T ss_pred             CCCE---EEeeec-eEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCC----CCEEEeC--CCCHHHHHHH
Confidence            2110   000011 1233333110           0  1123666778899987652    2344444  4699999999


Q ss_pred             HHHHHHHHHhh
Q 043610          419 VAFMKDFQAKH  429 (430)
Q Consensus       419 l~~L~~~~~~~  429 (430)
                      +++|++++.++
T Consensus       436 l~al~~~l~~~  446 (454)
T 4ao9_A          436 VAAIGSFIGGH  446 (454)
T ss_dssp             HHHHHHHHHHS
T ss_pred             HHHHHHHHHhc
Confidence            99999998865

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=98.89  E-value=1.1e-07  Score=96.75  Aligned_cols=336  Identities=9%  Similarity=-0.000  Sum_probs=177.9

Q ss_pred             CCCCceeecCCCCC-----CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           67 QEDRVFNFAAGPAN-----LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        67 ~~~~~~l~~~gp~~-----~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ..++.+.+..|-..     -+|.|.+++.+++.+....+.  + .......    ..++.+.|.++...+-+ .|+|. +
T Consensus        65 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~--~-~~~~~~~----~~~lAe~L~~~~p~~~~-~v~f~-~  135 (473)
T 4e3q_A           65 NGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHA--F-FGRMSDQ----TVMLSEKLVEVSPFDSG-RVFYT-N  135 (473)
T ss_dssp             TCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCC--C-TTEEEHH----HHHHHHHHHHHSSCSSC-EEEEE-S
T ss_pred             CCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccc--c-ccccCHH----HHHHHHHHHhhCCCCcc-EEEEe-C
Confidence            34444455555422     378999999998875321111  0 0001121    22455667777765543 66665 8


Q ss_pred             cHHHHHHHHHhhc-------CCCCC-cEEEEeCChhHHHHHHHH-------HHhC----CceEEecCCCCcCCCCCCc--
Q 043610          142 GATTQFAAVPLNL-------CTPND-PVDYIVTGSWGDKAFKEA-------QKFC----NPQVIWSGKAEKYTKIPNF--  200 (430)
Q Consensus       142 gaT~a~~~~~~sl-------~~~gd-~vl~~~~g~~~~~~~~~a-------~~~g----~~~~v~~~~~~~~g~~~d~--  200 (430)
                      |||||++.++.-.       -+++. +++....+|.|.-.....       +..+    ....++....-.++..-+.  
T Consensus       136 sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  215 (473)
T 4e3q_A          136 SGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEE  215 (473)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHH
T ss_pred             chHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhh
Confidence            9999999876532       12343 455555555442111111       0111    1111111100000000000  


Q ss_pred             -------cccc--c----CCCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--cccccc--
Q 043610          201 -------DALE--Q----NPDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTR--  255 (430)
Q Consensus       201 -------~~l~--i----~~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~--  255 (430)
                             ++++  +    .+++.+|++--+....|++.|      ++.++ +++|+++|+|+++. ||-.  .+-.+.  
T Consensus       216 ~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~g  295 (473)
T 4e3q_A          216 QFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYD  295 (473)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcC
Confidence                   1122  1    124556666556677788877      24554 69999999999986 4321  111122  


Q ss_pred             --ccEEEeCCCccc--cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHH
Q 043610          256 --FGVIYAGAQKNV--GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNE  331 (430)
Q Consensus       256 --~d~~~~s~~K~~--gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~  331 (430)
                        -|+++.  .|.+  |..=+|.+.+++++.+...+..   ..+.. ...+.++ +-|..+..++.++|+.++++    .
T Consensus       296 v~PDi~t~--~K~l~gG~~Pl~av~~~~~i~~~~~~~~---~~~~~-~~hg~T~-~Gnpla~Aaala~L~~i~~~----~  364 (473)
T 4e3q_A          296 FTPDAIIS--SKNLTAGFFPMGAVILGPELSKRLETAI---EAIEE-FPHGFTA-SGHPVGCAIALKAIDVVMNE----G  364 (473)
T ss_dssp             CCCSEEEE--CGGGGTTSSCCEEEEECHHHHHHHHHHH---HHHSC-CCCCCTT-TTCHHHHHHHHHHHHHHHHS----S
T ss_pred             CCCChHHh--cccccCCCCCcccccccHHHHHHhcccc---ccccc-cccCCCC-CCCcchhhhhhhhhhhhccc----c
Confidence              266654  5888  3222788899999876532100   00000 0012232 44666777788889988753    3


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc-ceEEEEcC-CC----------chhHHHHHHHHHcCCeecCCCCCC
Q 043610          332 VEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF-MNVPFTLE-KS----------DLEAEFVKEAAKEKMVQLKGHRSV  399 (430)
Q Consensus       332 v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~-~iv~f~~~-~~----------~~~~~~~~~L~~~Gi~~~~g~~~~  399 (430)
                      +.++.+++.++++++|++......+.   +.|.- ..+.+.+. +.          .....+.+.+.++|+++.+..   
T Consensus       365 l~~~~~~~g~~l~~~L~~l~~~~~v~---~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g---  438 (473)
T 4e3q_A          365 LAENVRRLAPRFEERLKHIAERPNIG---EYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG---  438 (473)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTEE---EEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET---
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCee---EEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC---
Confidence            55566666777777776532111110   11211 22334331 10          112257788889999875421   


Q ss_pred             CeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          400 GGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       400 g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+|+++-...|++|+|++++.|++.+++
T Consensus       439 ~~i~l~PPL~it~~eid~~~~~l~~al~~  467 (473)
T 4e3q_A          439 QSVVLCPPFILTEAQMDEMFDKLEKALDK  467 (473)
T ss_dssp             TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            36999988888999999999998887754

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=98.75  E-value=4.8e-08  Score=106.13  Aligned_cols=201  Identities=8%  Similarity=0.034  Sum_probs=116.4

Q ss_pred             ccEEEEeec-CCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCccccCCc--
Q 043610          209 AKYLHICAN-ETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQKNVGPSG--  271 (430)
Q Consensus       209 ~~lv~i~~~-~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K~~gp~G--  271 (430)
                      +.+|++=-+ .+..|++.+      +|.++ +++|+++|+|+++. +|-.  .+-.+.+    |++  +..|.+|- |  
T Consensus       595 iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDii--tlsK~L~g-G~~  671 (831)
T 4a0g_A          595 VGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIA--CFAKLLTG-GMV  671 (831)
T ss_dssp             EEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEE--EECGGGGT-TSS
T ss_pred             EEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEE--EEeccccc-Ccc
Confidence            445555333 566788775      34554 58999999999876 5421  1211222    555  57899943 3  


Q ss_pred             -cEEEEEcHHHHhccCCCCCc-cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHH----HHHHH
Q 043610          272 -VTIVIVRKDLLGNAQDKTPL-MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGL-NEVEKMNRKK----AELLY  344 (430)
Q Consensus       272 -~g~l~v~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~-~~v~~~~~~l----~~~l~  344 (430)
                       +|++.+++++.+.+.+.... .+      ..+.+ ++.|....+++.++|+.++++ ++ +.+.+....+    .+.+.
T Consensus       672 Plgav~~~~~i~~~~~~~~~~~~~------~hg~T-~~g~Pla~Aaala~L~~i~~~-~l~~~~~~~~~~l~~~l~~~l~  743 (831)
T 4a0g_A          672 PLAVTLATDAVFDSFSGDSKLKAL------LHGHS-YSAHAMGCATAAKAIQWFKDP-ETNHNITSQGKTLRELWDEELV  743 (831)
T ss_dssp             CCEEEEECHHHHHTTCSSCGGGSC------CCCCT-TTTCHHHHHHHHHHHHHHHCT-TTCTTBCTTSSBBCCCSCHHHH
T ss_pred             CcEEEEECHHHHHHHhcccccccc------eeecC-CcccHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHH
Confidence             69999999988765321100 00      01122 345667778888899987642 22 1221111121    12344


Q ss_pred             HHHHccCCceecCCCCCCCccceEEEEcCCC--------chhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHH
Q 043610          345 NVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS--------DLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVE  416 (430)
Q Consensus       345 ~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~--------~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~  416 (430)
                      +.+.+...+..+.    ... .++.+.+.+.        ....++.+.|.++||++.+..   +.||+++...++++||+
T Consensus       744 ~~l~~~~~v~~vr----g~G-l~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~g---~~lrl~pp~~~t~e~id  815 (831)
T 4a0g_A          744 QQISSHSAVQRVV----VIG-TLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPLG---NVIYLMCGPCTSPEICR  815 (831)
T ss_dssp             HHHHHSTTEEEEE----EET-TEEEEEEC---------CHHHHHHHHHHHHTTEECCCBT---TEEEEECCTTCCHHHHH
T ss_pred             HHHhhCCCceeEe----ecc-cEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEecC---CEEEEECCCCCCHHHHH
Confidence            4454432222110    112 2344444321        112258888999999987532   47999988888999999


Q ss_pred             HHHHHHHHHHHh
Q 043610          417 KLVAFMKDFQAK  428 (430)
Q Consensus       417 ~ll~~L~~~~~~  428 (430)
                      ++++.|++++++
T Consensus       816 ~~~~~l~~~l~~  827 (831)
T 4a0g_A          816 RLLTKLYKRLGE  827 (831)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	430
d1w23a_	360	c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT	2e-89
d2c0ra1	361	c.67.1.4 (A:2-362) Phosphoserine aminotransferase,	6e-89
d1bjna_	360	c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT	2e-82
d1m32a_	361	c.67.1.3 (A:) 2-aminoethylphosphonate transaminase	5e-26
d1vjoa_	377	c.67.1.3 (A:) Alanine-glyoxylate aminotransferase	4e-25
d1iuga_	348	c.67.1.3 (A:) Subgroup IV putative aspartate amino	3e-24
d1h0ca_	388	c.67.1.3 (A:) Alanine-glyoxylate aminotransferase	8e-24
d2ch1a1	388	c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminas	4e-23
d2bkwa1	382	c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransfe	1e-19
d1jf9a_	405	c.67.1.3 (A:) NifS-like protein/selenocysteine lya	4e-04

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]} Length = 360

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

 Score =  273 bits (699), Expect = 2e-89
 Identities = 167/359 (46%), Positives = 237/359 (66%), Gaps = 2/359 (0%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           +VFNF AGP+ LP+  L +AQ EL N+  + MSVME+SHR + ++ + E+A++ LR LL 
Sbjct: 3   QVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ 62

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSG 189
           IP +Y +LFLQGGA+ QF  +P+NL T     +Y++TGSW +KA KEA+      +  S 
Sbjct: 63  IPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAAST 122

Query: 190 KAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSK 249
           KA  Y  IP+F   + N +  YLHI +N TI+G +++ +P  + +   L+ADMSS+  S+
Sbjct: 123 KANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFP--EINHAPLIADMSSDILSR 180

Query: 250 PVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPP 309
           P+ V +FG+IYAGAQKN+GPSGVT+VIV+KDLL    ++ P ML Y  H +++SLYNTPP
Sbjct: 181 PLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPP 240

Query: 310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP 369
            + IYM   V +++ +LGG   + K N +KA+++Y+ ID SNGFY    EK  RS MNV 
Sbjct: 241 TFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVT 300

Query: 370 FTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
           F L   +L  +F+ +A ++  V L GHRSVGG RASIYNA+P+     L   M  F+  
Sbjct: 301 FNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN 359

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

 Score =  272 bits (695), Expect = 6e-89
 Identities = 173/361 (47%), Positives = 241/361 (66%), Gaps = 2/361 (0%)

Query: 69  DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL 128
           +R +NF AGPA LP +VL +AQ+E  +++ +GMS+MEMSHRG  ++++  +A++ L ALL
Sbjct: 2   ERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALL 61

Query: 129 NIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS 188
             P  Y VLF+QGGA+TQFA +P+N        +Y++TGSW  KA KEA+   +  V  S
Sbjct: 62  GNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAAS 121

Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
            +A  Y  +P    ++   +A YLH+ +NETI G +FK +P   +    L+ DMSS+  S
Sbjct: 122 SEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFKAFPDTGS--VPLIGDMSSDILS 179

Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
           +P D+ +FG++YAGAQKN+GPSGVT+VIVR+DL+  +    P ML Y  + +NNSLYNTP
Sbjct: 180 RPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTP 239

Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           P + IYM   V +++ E GGL  V++ NRKKA L+Y+ ID S GFY+  V+   RS MN+
Sbjct: 240 PSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNI 299

Query: 369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
            F L   +LE EFVK + +E  V LKGHRSVGG+RASIYNA+P    E LV FM+ F+  
Sbjct: 300 TFRLASEELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS 359

Query: 429 H 429
            
Sbjct: 360 R 360

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]} Length = 360

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

 Score =  255 bits (652), Expect = 2e-82
 Identities = 179/361 (49%), Positives = 237/361 (65%), Gaps = 3/361 (0%)

Query: 70  RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN 129
           ++FNF++GPA LP +VL +AQ EL +W G G SVME+SHRGKEF  + E+AE D R LLN
Sbjct: 1   QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLN 60

Query: 130 IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS- 188
           +P  Y VLF  GG   QFAAVPLN+       DY+  G W   A KEA+K+C P V  + 
Sbjct: 61  VPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAK 120

Query: 189 GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS 248
              +    +      + + +A Y+H C NETI G+   E P       +  AD SS   S
Sbjct: 121 VTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVV-AADFSSTILS 179

Query: 249 KPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP 308
           +P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTP
Sbjct: 180 RPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTP 239

Query: 309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNV 368
           P +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ +    V K  RS MNV
Sbjct: 240 PTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYR-NDVAKRNRSRMNV 298

Query: 369 PFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 428
           PF L  S L+  F++E+    +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +
Sbjct: 299 PFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERR 358

Query: 429 H 429
           H
Sbjct: 359 H 359

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

 Score =  106 bits (263), Expect = 5e-26
 Identities = 54/367 (14%), Positives = 110/367 (29%), Gaps = 30/367 (8%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP      V  +A           M     +        ++E+    L AL    + 
Sbjct: 4   LTPGPLTTSRTVK-EA-----------MLFDSCTWDDDYNIGVVEQIRQQLTALATASEG 51

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQK-FCNPQVIWSGKAE 192
           Y+ + LQG  +    AV  +   P D V  +  G++G +  + A            G+  
Sbjct: 52  YTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVA 111

Query: 193 KYTKIPNFDALEQNPDAKYLHICAN--ETIHGVEFKEYPSAKNSTGILV---ADMSSNFC 247
           +         L  +P   ++ +  +   T       E  +  +  G      A  S    
Sbjct: 112 RPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGI 171

Query: 248 SKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYN 306
              +       + + A K + G  G   VI R+  L   +  +  +             N
Sbjct: 172 PMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDN 231

Query: 307 ------TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360
                 T P + +       + L + GG+    +  ++    L   +      +   ++ 
Sbjct: 232 HGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALG--FNTLLDD 289

Query: 361 SVRSFMNVPFTLEKSD--LEAEFVKEAAKEKMVQLKGHRSVGG-MRASIYNAMPLAGVEK 417
            + S +   F   +      +EF +   ++  V   G  S     R      +  A +  
Sbjct: 290 ELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITA 349

Query: 418 LVAFMKD 424
           L+  ++ 
Sbjct: 350 LLTAIRT 356

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]} Length = 377

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

 Score =  103 bits (257), Expect = 4e-25
 Identities = 55/369 (14%), Positives = 115/369 (31%), Gaps = 34/369 (9%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP+N    VL              M+V  + H    F +++++ +S LR +      
Sbjct: 22  LGPGPSNAHPSVLQA------------MNVSPVGHLDPAFLALMDEIQSLLRYVWQTENP 69

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEK 193
            ++    G  T    A   N   P D V   V G +G++    A ++       S    +
Sbjct: 70  LTIAV-SGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGE 128

Query: 194 YTKIPNFDALEQNPDAKYLHICANETIHGVEF---KEYPSAKNSTGILVADMSSNFCSKP 250
              +       +      L +   ET  G            +    +L+ D  ++    P
Sbjct: 129 VFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVP 188

Query: 251 VDVTRFGVIYAGAQ---KNVGPSGVTIVIVRKDLL-------GNAQDKTPLMLDYKIHDE 300
           + +  +GV  A +          G +   +    +           +    M     +  
Sbjct: 189 IFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWG 248

Query: 301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK 360
           +  +Y+      +Y        L+   GL    + ++K  E L+  ++         VEK
Sbjct: 249 SERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG--LSLHVEK 306

Query: 361 SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQL-KGHRSVGG--MRASI--YNAMPLAGV 415
             R        +          +    E  +++  G   + G   R  +  +N+     V
Sbjct: 307 EYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRK-ESV 365

Query: 416 EKLVAFMKD 424
           ++L+  ++ 
Sbjct: 366 DQLIPALEQ 374

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 348

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score =  100 bits (250), Expect = 3e-24
 Identities = 53/329 (16%), Positives = 97/329 (29%), Gaps = 29/329 (8%)

Query: 72  FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP 131
           +    GP  L  K L              ++  ++ HR +  + +  KA   LR      
Sbjct: 2   WLLTPGPVRLHPKALEA------------LARPQLHHRTEAAREVFLKARGLLREAFRT- 48

Query: 132 QEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIW---S 188
            E  VL L G  T    A+  NL  P + V   V G + ++ ++ A +            
Sbjct: 49  -EGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPY 107

Query: 189 GKAEKYTKIPNFDA---LEQNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSN 245
           G   +   +        L  + +     +     +     ++ P             S  
Sbjct: 108 GDTPRPEDVAKEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLV---GADMVTSLL 164

Query: 246 FCSKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSL 304
                ++        +G+QK +  P G+  V +    L   + +    LD     +    
Sbjct: 165 VGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGY-YLDLARELKAQKE 223

Query: 305 YNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS 364
             +     I +   V   L E+    E     +     L   +    G    P      S
Sbjct: 224 GESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGGLRPVPKR---FS 280

Query: 365 FMNVPFTLEKSDLEAEFVKEAAKEKMVQL 393
                F L +  +    VKEA  ++   +
Sbjct: 281 PAVAAFYLPE-GVPYARVKEAFAQRGAVI 308

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (248), Expect = 8e-24
 Identities = 37/371 (9%), Positives = 98/371 (26%), Gaps = 34/371 (9%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP+NLP +++                +  +    K+   I+++ +  ++ +      
Sbjct: 23  LGPGPSNLPPRIMAA------------GGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNP 70

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEK 193
            +++   G       A  +N+  P D       G WG +A    ++        +     
Sbjct: 71  LTLVI-SGSGHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGG 129

Query: 194 YTKIPNFDALEQ--NPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCSKPV 251
           +  +   +       P   +L    + T        +    +    L+   S        
Sbjct: 130 HYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASLGGTP 189

Query: 252 DVTRF----GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNT 307
                     +     +    P G +++            +      + +  +  + +  
Sbjct: 190 LYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWG 249

Query: 308 PPCYCIYMC---------GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV 358
                              L     L      E      ++A    +    + G      
Sbjct: 250 CDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVK 309

Query: 359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG--HRSVGGM-RASI--YNAMPLA 413
           + ++R        +       + V        +++ G    S G + R  +   NA    
Sbjct: 310 DPALRLPTVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATR-E 368

Query: 414 GVEKLVAFMKD 424
            V+++   ++ 
Sbjct: 369 NVDRVTEALRA 379

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

 Score = 98.2 bits (243), Expect = 4e-23
 Identities = 50/348 (14%), Positives = 110/348 (31%), Gaps = 34/348 (9%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE 133
              GP+N  ++VL              M+   +S+   E    +++ +  LR +      
Sbjct: 21  MGPGPSNCSKRVLTA------------MTNTVLSNFHAELFRTMDEVKDGLRYIFQTE-N 67

Query: 134 YSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEK 193
            + + + G A     A+  NL    D V   V G W ++A + ++++        G  ++
Sbjct: 68  RATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDR 127

Query: 194 YTKIPNFDALEQNPDAKYLHICANETIHGVEFK---EYPSAKNSTGILVADMSSNFCSKP 250
              +       +    K L +   ++  G+                +L+ D  ++ C  P
Sbjct: 128 PFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVP 187

Query: 251 VDVTRFGVIYAGAQKN---VGPSGVTIVIVRKDLL-----------GNAQDKTPLMLDYK 296
             + ++ +             P G+T + +    L               D   L   + 
Sbjct: 188 FYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWG 247

Query: 297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC 356
            +DE    ++T     I+        + E G  N++++       L      G  G    
Sbjct: 248 CYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEG--LGKMGLDIF 305

Query: 357 PVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG--HRSVGGM 402
             +   R        + K     +  + A     ++++G    + G  
Sbjct: 306 VKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKA 353

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.9 bits (216), Expect = 1e-19
 Identities = 46/358 (12%), Positives = 98/358 (27%), Gaps = 46/358 (12%)

Query: 74  FAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--IP 131
              GP  L   V               + V  + H   EF SI ++   + RA+      
Sbjct: 7   LIPGPIILSGAVQKA------------LDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAA 54

Query: 132 QEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWS--- 188
            +     L G  T  +     N      P   ++  S G  + + A    +         
Sbjct: 55  SKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVR 114

Query: 189 -GKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFKEYPSAK-----NSTGILVADM 242
             K  +   +              + +   +T   V       ++     +     V D 
Sbjct: 115 PLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDA 174

Query: 243 SSNFCSKPVDVTRFGV--IYAGAQK-NVGPSGVTIVIVRKDLLGN--------------A 285
             +   +  +   +GV      +QK    P+G++I +     +                +
Sbjct: 175 VCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFS 234

Query: 286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYN 345
             +    +         + + TPP   I    +  + +LE G     +           +
Sbjct: 235 SLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDS 294

Query: 346 VIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKG--HRSVGG 401
           +++G           ++ +       +     +   V    K   V + G  H+ +G 
Sbjct: 295 LVNGLQLTSVSRYPSNMSAHGLTAVYVA----DPPDVIAFLKSHGVVIAGGIHKDIGP 348

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]} Length = 405

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

 Score = 39.9 bits (92), Expect = 4e-04
 Identities = 41/331 (12%), Positives = 83/331 (25%), Gaps = 32/331 (9%)

Query: 72  FNFAAGPANLPEKVL---LKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALL 128
            + AA  A  P +V+    +     Y     G+  +       +    +E         +
Sbjct: 26  LDSAAS-AQKPSQVIDAEAEFYRHGYAAVHRGIHTL-----SAQATEKMENVRKRASLFI 79

Query: 129 NIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKA----FKEAQKFCNPQ 184
           N      ++F++G              +     D I+       A    ++        +
Sbjct: 80  NARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAE 139

Query: 185 VIWSGKAEKYTKIPNFDALEQNPDAK--YLHICANETIHGVEFKEYPSAKNSTGILVAD- 241
           +         T          +   +   +   +N         E  +  +  G  V   
Sbjct: 140 LRVIPLNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVD 199

Query: 242 --MSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHD 299
              +       V             K  GP+G+ I+ V++ LL                 
Sbjct: 200 GAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVS 259

Query: 300 ENNSLYN----------TPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG 349
            +               TP    I   G   EY+  L GLN + +  +       + ++ 
Sbjct: 260 LSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSAL-GLNNIAEYEQNLMHYALSQLES 318

Query: 350 SNGFYKCPVEKSVRSFMNVPFTLEKSDLEAE 380
                    +  +     + F L K      
Sbjct: 319 VPDLTLYGPQNRL---GVIAFNLGKHHAYDV 346

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	430
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	100.0
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	100.0
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	100.0
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	100.0
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	100.0
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	100.0
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	100.0
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	100.0
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	100.0
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	100.0
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	100.0
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	100.0
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	100.0
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	100.0
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	100.0
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.94
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.93
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.92
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.92
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.91
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.9
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.9
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.89
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.89
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.89
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.88
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.88
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.88
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.88
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.87
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.87
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.87
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.86
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.85
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.85
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.85
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.85
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.83
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.83
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.83
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.82
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.81
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.8
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.77
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.77
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.76
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.76
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.75
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.74
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.73
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.73
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.72
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.7
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.68
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.68
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.67
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.67
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.64
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.63
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.6
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.6
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.58
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.54
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.52
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.44
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.4
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.4
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.4
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.39
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.39
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.38
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.38
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.36
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.24
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.2
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.2
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.2
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.18
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.11
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.1
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.1
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.1
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.06
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.05
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	98.87
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	98.85

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.2e-47  Score=377.04  Aligned_cols=330  Identities=21%  Similarity=0.243  Sum_probs=278.1

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      |||+|||+++|++|+++|....            ++||+++|.++++++++.|+++++++.  ++++++||||+++++++
T Consensus         2 ~L~~PGP~~v~~~V~~am~~~~------------~~hr~~~f~~i~~~~~~~l~~ll~~~~--~~i~~~gsgT~a~e~~~   67 (348)
T d1iuga_           2 WLLTPGPVRLHPKALEALARPQ------------LHHRTEAAREVFLKARGLLREAFRTEG--EVLILTGSGTLAMEALV   67 (348)
T ss_dssp             EECSSSSCCCCHHHHHHHHSCC------------CCTTSHHHHHHHHHHHHHHHHHHTCSS--EEEEEESCHHHHHHHHH
T ss_pred             cccCCCCCCCCHHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhCCCC--CEEEEeCchHHHHHHHH
Confidence            7999999999999999987543            689999999999999999999999864  68888999999999999


Q ss_pred             hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--CC
Q 043610          152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EY  228 (430)
Q Consensus       152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei  228 (430)
                      .+++++||+++++.+|.|+.+|.+.+++++ ++..+..    ++++.++++++ .+++++.|+++|++|+||+++|  +|
T Consensus        68 ~nl~~~g~~vlv~~~G~f~~~~~~~a~~~~~~~~~~~~----~~g~~~~~~~~-~~~~~~~v~~~h~eTstG~~~~i~~i  142 (348)
T d1iuga_          68 KNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDY----PYGDTPRPEDV-AKEGYAGLLLVHSETSTGALADLPAL  142 (348)
T ss_dssp             HHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC----CTTCCCCTTTS-CCSSCSEEEEESEETTTTEECCHHHH
T ss_pred             HhcccccccceeecchHHHHHHHHHHHhcCcccccccc----cCCCccccccc-cccCCCeeEEEecchhhhhhccHHHH
Confidence            999999999999999999999999999998 6666655    35655554443 3678899999999999999999  77


Q ss_pred             ccc-c--CCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCccccccch---h
Q 043610          229 PSA-K--NSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIH---D  299 (430)
Q Consensus       229 ~~~-~--~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~---~  299 (430)
                      .++ +  .+++++++|++|++|+.|+|++++  |++++++|||+ ||+|+|++++|+++++++.+ .++|+|+..+   .
T Consensus       143 ~~~~~~~~~~~l~~vDavss~g~~~i~~d~~~iD~~~~~sqK~l~gppG~~~v~~s~~~le~~~~-~~~~~dl~~~~~~~  221 (348)
T d1iuga_         143 ARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKP-RGYYLDLARELKAQ  221 (348)
T ss_dssp             HHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC-CSSTTCHHHHHHHH
T ss_pred             HHHHHhhhccceeechhhhcccccccccccccCCEEEeccccceecCCceeeeeechHHHhhhcc-cccccchhhhhhhh
Confidence            775 3  567899999999999999999885  89999999999 79999999999999998765 4567776543   3


Q ss_pred             hcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH
Q 043610          300 ENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA  379 (430)
Q Consensus       300 ~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~  379 (430)
                      +++.+++|||+..++++.++|+++.++ + ++..++.+.....+++.+.+ .|+.+.+   +.+|+++++|.+|+ +.+.
T Consensus       222 ~~~~~~~Tp~v~~i~~l~~aL~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~gl~~~~---~~~s~~v~~~~~P~-g~~~  294 (348)
T d1iuga_         222 KEGESAWTPAINLVLAVAAVLEEVLPR-L-EEHLALKAWQNALLYGVGEE-GGLRPVP---KRFSPAVAAFYLPE-GVPY  294 (348)
T ss_dssp             TTTCCSSCCCHHHHHHHHHHHHHHGGG-H-HHHHHHHHHHHHHHHHHHHH-TTCEESC---SSBCTTCEEEECCT-TCCH
T ss_pred             ccCcccccccchHHHHHHHHHHHHHHH-H-hHHHHHHHHHHHHHhhhhhh-hhhccCh---hhcCCeEEEEECCC-CCCH
Confidence            467788999999999999999988643 3 44455556566777777764 7888753   34788899999986 3444


Q ss_pred             -HHHHHHHHcCCeecCCCCCCC--eeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          380 -EFVKEAAKEKMVQLKGHRSVG--GMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       380 -~~~~~L~~~Gi~~~~g~~~~g--~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       ++.+.|+++||++..|+....  .+||+++++++.+|+++++++|++++++
T Consensus       295 ~~~~~~l~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l~~  346 (348)
T d1iuga_         295 ARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEE  346 (348)
T ss_dssp             HHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence             789999999999988876433  6999999999999999999999999876

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=100.00  E-value=3.1e-46  Score=368.23  Aligned_cols=354  Identities=44%  Similarity=0.734  Sum_probs=283.6

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ++.|||+|||+++|++|+++|.+.+.++.+.|.+.++++||+++|.++++++|+.|++++|++++|+|+++++|+|.+++
T Consensus         2 ~~~~~F~pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~e   81 (361)
T d2c0ra1           2 ERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA   81 (361)
T ss_dssp             CCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred             CCCcccCCCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHH
Confidence            57899999999999999999999998888899999999999999999999999999999999988899999888888888


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCccccCC
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      +++.++..+|+.++++.++.|+.+|.+.++++| .+..+...    ++..+++++++ .....+.   +|++|.||...|
T Consensus        82 a~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~v~~~tg~~~~  154 (361)
T d2c0ra1          82 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSE----ASNYMTLPKLQEIQLQDNA---AYLHLTSNETIE  154 (361)
T ss_dssp             HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECG----GGTTCSCCCGGGCCCCTTE---EEEEEESEETTT
T ss_pred             HHHhccccCCCceEEEeechhhhhhhhhhhhcCceeeeeccc----cccccchhhhhhhcccCcc---eEEEEeccccee
Confidence            988899999999999999999999999999999 55555542    45567777776 3233333   345577899999


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCCccccccccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCC
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNS  303 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~  303 (430)
                        +|.++ +++|++++||++|++|+.|+|++++|+.++++||+++|+|.+.+++..+.+....+..+.+.+|........
T Consensus       155 ~~~i~~~~~~~~al~~vDavss~g~~~id~~~~di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (361)
T d2c0ra1         155 GAQFKAFPDTGSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNS  234 (361)
T ss_dssp             TEECSSCCCCTTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTT
T ss_pred             cceEEEeeccCCceEEEEeeccccccccccccceeEEEecccccccccCcEEEEEhHHhhhCcccccccccccccccccc
Confidence              78776 799999999999999999999999999999999999855545555544444443333333444433334444


Q ss_pred             CCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhH-HHH
Q 043610          304 LYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFV  382 (430)
Q Consensus       304 ~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~  382 (430)
                      ...+++......+..++......++.....+++++.+..+++..............++.||+++++|.+++ +.+. ++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~-~~~~~~~~  313 (361)
T d2c0ra1         235 LYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-EELEKEFV  313 (361)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-HHHHHHHH
T ss_pred             ccccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhhccceEEEEECCC-cccHHHHH
Confidence            44566666666666666555556677788888888888888888764444443346677899999999986 4444 789


Q ss_pred             HHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          383 KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       383 ~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      +.|+++||++..||+..|++|||++++++.|||++|+++|+++.+++.
T Consensus       314 ~~L~~~GI~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~~~  361 (361)
T d2c0ra1         314 KASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSRG  361 (361)
T ss_dssp             HHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHCCCEEecCCCcCCeEEEEecCCCCHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999888999999999999999999999999998763

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-45  Score=364.70  Aligned_cols=345  Identities=15%  Similarity=0.243  Sum_probs=281.7

Q ss_pred             ccccCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           62 QIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        62 ~~~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      .+|+.  ++.++|+|||+++|++|+++|...            .++||+++|.++++++|+.|++++|++++|+|+ +++
T Consensus        13 ~~~~~--~~~~l~~pGP~~~~~~Vl~am~~~------------~i~HRs~~f~~i~~ea~~~l~~llg~~~~~~ii-~~g   77 (388)
T d1h0ca_          13 KPLSI--PNQLLLGPGPSNLPPRIMAAGGLQ------------MIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLV-ISG   77 (388)
T ss_dssp             SCCCC--CCCEECSSSCCCCCHHHHHHHTCC------------CCCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEE-ESS
T ss_pred             cccCC--CcCccccCCCCCCCHHHHHHhCcC------------CCCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEE-EcC
Confidence            34554  345999999999999999998532            378999999999999999999999999876655 579


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc---cCCCccEEEEeec
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICAN  217 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~  217 (430)
                      |||+++++++.+++.+|++++++..++++.+|...++..+ ....+...    ++..++.++++   .++++++|+++|+
T Consensus        78 sgT~a~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~  153 (388)
T d1h0ca_          78 SGHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKD----PGGHYTLQEVEEGLAQHKPVLLFLTHG  153 (388)
T ss_dssp             CHHHHHHHHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCC----TTCCCCHHHHHHHHHHHCCSEEEEESE
T ss_pred             cHHHHHHHHHHHhhccCCceeeecccceeeeeccccccccccccccccC----CccccchHHHHHHhccCCcceEEEeee
Confidence            9999999999999999999999999999998888777777 55555443    33345655554   4678999999999


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC---
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK---  288 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~---  288 (430)
                      +|.||+++|  +|+++ +++|+++++|++|++|..++|++++  |++++++|||+ ||.|+|+++++++.++.+...   
T Consensus       154 ~n~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~g~~~~d~~~~~~D~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~  233 (388)
T d1h0ca_         154 ESSTGVLQPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTK  233 (388)
T ss_dssp             ETTTTEECCCTTHHHHHHTTTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCTTCEEEEECHHHHHHHTTCSSC
T ss_pred             eeccccccCHHHHHHHhhcccccceeccccccccccccccccccceecccccccccCCCceEEEeecHHHHHhhhhcccc
Confidence            999999999  79886 7999999999999999999999987  79999999999 599999999999998875432   


Q ss_pred             -CCccccccch-------hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          289 -TPLMLDYKIH-------DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       289 -~p~~~~~~~~-------~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                       .+.++++...       ...+.+.+|++...++++.++++++.+ .|++.+.+++.++.+++++.+.+ .|+.++..++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~-~g~~~~~~~~~~l~~~l~~~~~~-~g~~~~~~~~  311 (388)
T d1h0ca_         234 PFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAE-QGLENSWRQHREAAAYLHGRLQA-LGLQLFVKDP  311 (388)
T ss_dssp             CSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-HTCCBSSCSG
T ss_pred             ccccccccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHH-hccccccccccchhHHHHHHHhh-cCcccccCCH
Confidence             2233332211       112345579999999999999998874 68999999999999999999986 6777765577


Q ss_pred             CCCccceEEEEcCCCchhH-HHHHHHHH-cCCeecCCCC--CCCeeEEe-ecCCCCHHHHHHHHHHHHHHHHh
Q 043610          361 SVRSFMNVPFTLEKSDLEA-EFVKEAAK-EKMVQLKGHR--SVGGMRAS-IYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~~-~Gi~~~~g~~--~~g~iRis-~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..|++++++|.+|+ +.+. ++.+.|.+ .||.+..|..  ..+.|||| ++.++++||||+++++|++++++
T Consensus       312 ~~rs~~i~~~~~p~-~~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~  383 (388)
T d1h0ca_         312 ALRLPTVTTVAVPA-GYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQH  383 (388)
T ss_dssp             GGBCTTEEEEECCT-TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCeEEEEECCC-CCCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            78898999999985 3444 78888855 5998877754  23479999 56789999999999999999886

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-44  Score=352.89  Aligned_cols=354  Identities=42%  Similarity=0.648  Sum_probs=276.7

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      .+|||+|||+.+|++|+++|.+++.++++.|.|.++++||+++|.++++++|+.|++++|++++++|+++++++|.++.+
T Consensus         1 ~~~nF~pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a   80 (360)
T d1bjna_           1 QIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAA   80 (360)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred             CeEEeCCCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHhh
Confidence            37999999999999999999999999988999999999999999999999999999999998877888887777777777


Q ss_pred             HHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC
Q 043610          150 VPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       150 ~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      ++.++..+++.++++..++++.+|...+++.| ....+...    ++..++.++++  +.+++++++++|.+|.||+.+|
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~v~~~~~~t~~~~~  156 (360)
T d1bjna_          81 VPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKV----TVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIA  156 (360)
T ss_dssp             HHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEE----EETTEEEECCGGGCCCCSSCSCEEECSEETTTTEE
T ss_pred             hhhcccccccccceecccchhhhhHHHHhhcCccceeeccc----cCCCcchhhhhhhhccCCceeEEEecccccccCcc
Confidence            77778888999998999999988887777777 44333321    22234444444  5788899999999999999988


Q ss_pred             -CCccccCCCcEEEEeccCcCCCCccccccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCC
Q 043610          227 -EYPSAKNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSL  304 (430)
Q Consensus       227 -ei~~~~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~  304 (430)
                       .....+.+++++++|++++++..++|+.++|++++++||+++ |+|.++++.+++..+.... ...+..+....+....
T Consensus       157 ~~~i~~~~~~~~v~vDa~~~~~~~~vd~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  235 (360)
T d1bjna_         157 IDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIA-CPSILDYSILNDNGSM  235 (360)
T ss_dssp             CCCCCCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTT-SCGGGCHHHHHHTTTC
T ss_pred             ccceecccccceeeeeeeccccceeeeeccceeEEEEcccccccCCCceeEeeehhhhhcccc-CCcchhhHHHHhhhhh
Confidence             322235788999999999999999999999999999999996 8888888888776554322 1112222222233333


Q ss_pred             CCCcc-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHH
Q 043610          305 YNTPP-CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVK  383 (430)
Q Consensus       305 ~~T~~-~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~  383 (430)
                      ..+++ .....+...++..+ ..++.+...+++.+++.+++..+.. .+.......+..|++++++|.+++.....+|.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~rs~~v~~f~~~~~~~~~~~~~  313 (360)
T d1bjna_         236 FNTPPTFAWYLSGLVFKWLK-ANGGVAEMDKINQQKAELLYGVIDN-SDFYRNDVAKRNRSRMNVPFQLADSALDKLFLE  313 (360)
T ss_dssp             SSCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHH-CSSEECCBCGGGBCSSEEEEEESSGGGHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHHHhhhc-cccccccCCcccccceEEEEEcCCcccHHHHHH
Confidence            33444 44444444444433 3567888889999998888888875 555555456778899999999986333337999


Q ss_pred             HHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          384 EAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       384 ~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      .|+++||++..|++..|.||||+++++|+|||++|+++|+++.++|.
T Consensus       314 ~l~~~Gi~~~~G~~~~g~~Ris~~~~~t~edV~~li~~l~e~~~~~~  360 (360)
T d1bjna_         314 ESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG  360 (360)
T ss_dssp             HHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHCCCEeecCCCccCeEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Confidence            99999999999998888899999999999999999999999999874

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=100.00  E-value=2.2e-44  Score=357.82  Aligned_cols=341  Identities=17%  Similarity=0.243  Sum_probs=277.4

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      ++.+||+|||++++++|+++|...            .++||+++|.++++++|+.|++++|+++ +++++++||||++|+
T Consensus        16 ~~~~l~~PGP~~~~~~V~~Am~~~------------~~~hr~~ef~~i~~~~r~~L~~ll~~~~-~~~i~~~gsgT~a~e   82 (388)
T d2ch1a1          16 PEKIMMGPGPSNCSKRVLTAMTNT------------VLSNFHAELFRTMDEVKDGLRYIFQTEN-RATMCVSGSAHAGME   82 (388)
T ss_dssp             CCCBCCSSSSCCCCHHHHHHTTSC------------CCCTTCHHHHHHHHHHHHHHHHHHTCCC-SCEEEESSCHHHHHH
T ss_pred             CcceeeeCCCCCCCHHHHHHhCcC------------CCCCCCHHHHHHHHHHHHHHHHHhCCCC-CeEEEEcCcHHHHHH
Confidence            456999999999999999997432            3789999999999999999999999976 478888999999999


Q ss_pred             HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc---cCCCccEEEEeecCCCcccc
Q 043610          149 AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       149 ~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~~t~tG~~  224 (430)
                      +++.+++.+|++++++.+++|+.+|...+++++ ....+...    ++...+.++++   .++++++++++|++|.||++
T Consensus        83 a~~~~l~~~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~  158 (388)
T d2ch1a1          83 AMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGP----PDRPFSLETLARAIELHQPKCLFLTHGDSSSGLL  158 (388)
T ss_dssp             HHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC----TTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred             HHHHHhccccccccccccccccccchhhhhhhcccccccccc----cccccchhhhhhhhccCCcceeeeeecccccccc
Confidence            999999999999999999999999988888887 55555553    33344444443   46789999999999999999


Q ss_pred             CC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCC----CCCcccc
Q 043610          225 FK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD----KTPLMLD  294 (430)
Q Consensus       225 ~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~----~~p~~~~  294 (430)
                      +|  +|.++ +++|++++||++|++|+.|+|++++  |+++++.|||+ ||+|+|+++++++.++....    ....+.+
T Consensus       159 ~~~~~i~~~~~~~~~~~~vD~~ss~g~~pid~~~~~~d~~~~s~~K~~~gp~G~g~~~~~~~~~~~~~~~~~~~~~~~~~  238 (388)
T d2ch1a1         159 QPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWD  238 (388)
T ss_dssp             CCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGC
T ss_pred             cchhhhcchhccccceeeeeeeecccccccchhccCceEEEEccccccCCCCeEEEEeccHHHHHhhhcccCcccccccc
Confidence            99  67776 7899999999999999999999987  69999999999 59999999999998886432    2222332


Q ss_pred             ccch-------hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          295 YKIH-------DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       295 ~~~~-------~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      +...       .+.+.+++|+++..++++..+++.+.. ++.+...++.+++..+.+..+.. .++.....++..|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~rs~~v  316 (388)
T d2ch1a1         239 LLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAE-EGLENQIKRRIECAQILYEGLGK-MGLDIFVKDPRHRLPTV  316 (388)
T ss_dssp             HHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHH-HTCCBSSCSGGGBCTTE
T ss_pred             chhhhhhhcccccccccCccchHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHhhhhh-cccccccCCHHHhCCeE
Confidence            2111       233456789999999999999998874 58899999999988888888875 55555545778899999


Q ss_pred             EEEEcCCCchhH-HHHHHHHH-cCCeecCCCCC--CCeeEEee-cCCCCHHHHHHHHHHHHHHHHhh
Q 043610          368 VPFTLEKSDLEA-EFVKEAAK-EKMVQLKGHRS--VGGMRASI-YNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       368 v~f~~~~~~~~~-~~~~~L~~-~Gi~~~~g~~~--~g~iRis~-~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      ++|.+|+ +.+. ++.+.|.+ +||.+..|...  .+.||||+ +.++++|||++++++|+++++.+
T Consensus       317 ~~~~~p~-g~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~  382 (388)
T d2ch1a1         317 TGIMIPK-GVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKAT  382 (388)
T ss_dssp             EEEECCT-TCCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCC-CCCHHHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHhh
Confidence            9999986 3444 78888855 59988877542  34699994 55789999999999999999864

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=100.00  E-value=4.6e-43  Score=344.56  Aligned_cols=352  Identities=38%  Similarity=0.645  Sum_probs=267.6

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~  148 (430)
                      +.+|||+|||+++|++|+++|.+.+.++.+.|.+.++++||+++|.++++++|+.|++++|+++++.|+++ +|+++++.
T Consensus         2 ~~~~nF~pGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~~i~~~-~gt~~~~~   80 (360)
T d1w23a_           2 KQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFL-QGGASLQF   80 (360)
T ss_dssp             CCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEE-SSHHHHHH
T ss_pred             CceeEeCCCCcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEe-CCcHHHHH
Confidence            67999999999999999999999998888889999999999999999999999999999999988677776 45555554


Q ss_pred             -HHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC
Q 043610          149 -AVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       149 -~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                       ++..++..+++.++++..++++.+|...+++.+ ....+...    ++...+.++++  ...+.+.++|.+|.||++.|
T Consensus        81 ~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~tg~~~~  154 (360)
T d1w23a_          81 TMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTK----ANSYQSIPDFS--EFQLNENDAYLHITSNNTIY  154 (360)
T ss_dssp             HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECG----GGTSCSCCCGG--GCCCCTTEEEEEEESEETTT
T ss_pred             HHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccc----cccccchhhhh--hcccccccceeEecCCcccc
Confidence             555556788899999999999999988888887 44333332    22222333343  22223335677788999999


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCCccccccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcC
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSKPVDVTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENN  302 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~  302 (430)
                        +|+++ +++|++++||++|++|+.++|+++||+.+.+++|..+ |+|.|+++.++...+.... .+.+..+....+..
T Consensus       155 ~~~i~~~~~~~g~l~ivDavqs~g~~~id~~~~~vd~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  233 (360)
T d1w23a_         155 GTQYQNFPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ-VPTMLQYATHIKSD  233 (360)
T ss_dssp             TEECSSCCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTT-CCGGGCHHHHHHTT
T ss_pred             ceeeeeccccceeeEEeeccccccccccccccccceEEeeccccccCCcceeeEechhhhccccc-CCcchhhhhhhhhh
Confidence              78886 7999999999999999999999999877777777665 5566777777666544322 22233333333444


Q ss_pred             CCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHH
Q 043610          303 SLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFV  382 (430)
Q Consensus       303 ~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~  382 (430)
                      ....|++.....+...++....+.++.....++.................+.....+++.||+++++|.+++.....+|.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~~~~~~~~~  313 (360)
T d1w23a_         234 SLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFL  313 (360)
T ss_dssp             TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHH
T ss_pred             hhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhcceeEEEEEcCCCccHHHHH
Confidence            55567777777777766666665555566666666666666666665444445546788899999999998632333799


Q ss_pred             HHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          383 KEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       383 ~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +.|.++||.+..||+..|++|||+++++|.|||++|+++|++|.+.
T Consensus       314 ~~l~~~GI~~~~G~~~~ggiRiS~~~~~t~e~V~~Li~~~~~~~~~  359 (360)
T d1w23a_         314 AKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKEN  359 (360)
T ss_dssp             HHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCeeeeCCCccCcEEEEeeCCCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999988889999999999999999999999999763

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=100.00  E-value=1.1e-43  Score=349.05  Aligned_cols=337  Identities=18%  Similarity=0.258  Sum_probs=271.9

Q ss_pred             eeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHH
Q 043610           72 FNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVP  151 (430)
Q Consensus        72 ~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~  151 (430)
                      +||+|||+++|+.|+++|...            ..+|+++++.++++++|+.|++++|+++++.++++++|+|+++++++
T Consensus         2 ~l~~pGP~~~~~~V~~A~~~~------------~~~~~~~~~~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~   69 (361)
T d1m32a_           2 LLLTPGPLTTSRTVKEAMLFD------------SCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVL   69 (361)
T ss_dssp             EECSSSSCCCCHHHHHTTCCC------------CCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHH
T ss_pred             ccccCCCCCCCHHHHHHhhhh------------ccCCCcHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHH
Confidence            589999999999999987543            26789999999999999999999999987667778899999999999


Q ss_pred             hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcc--ccc--cCCCccEEEEeecCCCccccCC
Q 043610          152 LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFD--ALE--QNPDAKYLHICANETIHGVEFK  226 (430)
Q Consensus       152 ~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~--~l~--i~~~~~lv~i~~~~t~tG~~~p  226 (430)
                      .++..+++.++++..++++..+....+..+ ....+....   .. .+..+  ...  ..+++++|+++|++|.||+++|
T Consensus        70 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~  145 (361)
T d1m32a_          70 GSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE---VA-RPDVQAIDAILNADPTISHIAMVHSETTTGMLNP  145 (361)
T ss_dssp             HHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT---TS-CCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC
T ss_pred             HHhhhhccccceeeehhhhhhHHHHhhhhhcccccccccc---cC-CccchhhHHHHHhccCccceEEEeeecccccchh
Confidence            999988999998888888876666666666 554444422   11 22222  222  5789999999999999999999


Q ss_pred             --CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCCCc-cccc--c-
Q 043610          227 --EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKTPL-MLDY--K-  296 (430)
Q Consensus       227 --ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~p~-~~~~--~-  296 (430)
                        +|+++ +++|+++++|++|++|.+|+|++++  |++++++|||+ ||+|+|+++++++.++...+.... +...  . 
T Consensus       146 i~~i~~~~~~~g~~~~vDa~qs~G~~~~d~~~~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  225 (361)
T d1m32a_         146 IDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQW  225 (361)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHH
T ss_pred             hhhhhhhhcccceeeEeecccccCcccccccccccceEEeeecccccCCCCceEEEechhhhhhhccccccccccchhhh
Confidence              78886 7899999999999999999999987  79999999999 699999999999999886653221 1100  0 


Q ss_pred             --chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC
Q 043610          297 --IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       297 --~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                        .........+|++...++++..+++.+..+++.+.+.+++..+.+.+++.+.. .|+.+. .++..|++++++|.+|.
T Consensus       226 ~~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~-~~~~~rs~~v~~~~~p~  303 (361)
T d1m32a_         226 RCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA-LGFNTL-LDDELHSPIITAFYSPE  303 (361)
T ss_dssp             HHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TTCCBS-SCGGGBCSSEEEEECCC
T ss_pred             ccccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhh-cCCccc-CChhhcCCcEEEEECCC
Confidence              01123445689999999999999988877766788889999999999999986 777665 36677898888998874


Q ss_pred             C-chhH-HHHHHHHHcCCeecCCCCC-CCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          375 S-DLEA-EFVKEAAKEKMVQLKGHRS-VGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       375 ~-~~~~-~~~~~L~~~Gi~~~~g~~~-~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      . ..+. ++++.|.++||++..|... .+.+|||+++|++++||++++++|++++
T Consensus       304 ~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~Ris~~g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         304 DPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             CTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHCCcEEECCCcCCCCEEEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            2 2333 7999999999998776543 4579999888999999999999999875

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.4e-42  Score=344.93  Aligned_cols=349  Identities=15%  Similarity=0.113  Sum_probs=277.4

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ..+.+|++++|.+++|+.|++++.+++.+.+++..+.  .+..+....+.++++|+.+++++|+.++++++|+ .|+|++
T Consensus        20 ~~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~~~--~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~~~-~~~T~~   96 (405)
T d1jf9a_          20 GLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRG--IHTLSAQATEKMENVRKRASLFINARSAEELVFV-RGTTEG   96 (405)
T ss_dssp             TEECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSC--SSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEE-SSHHHH
T ss_pred             CCCeEEEeCccccCCCHHHHHHHHHHHHhccCCCccc--hhHHHHHHHHHHHHHHHHHHHHcCCCCccccccc-CcHHHH
Confidence            3456899999999999999999999987655443211  2223456678899999999999997653477775 789999


Q ss_pred             HHHHHhhc----CCCCCcEEEEeCChhH--HHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          147 FAAVPLNL----CTPNDPVDYIVTGSWG--DKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       147 ~~~~~~sl----~~~gd~vl~~~~g~~~--~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      ++.++.++    +.+||+|++...++.+  ..|...+++.| +++.++.++   .| .+|+++++  ++++|++|+++|+
T Consensus        97 ~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~---~g-~~~~~~~~~~i~~~t~lv~~~~v  172 (405)
T d1jf9a_          97 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP---DG-TLQLETLPTLFDEKTRLLAITHV  172 (405)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT---TS-CBCGGGHHHHCCTTEEEEEEESB
T ss_pred             HHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCC---CC-cCCHHHHHHhccCCcEEEEEecC
Confidence            99887762    5789999988877766  45777788888 888888753   34 57888877  7999999999999


Q ss_pred             CCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc
Q 043610          218 ETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM  292 (430)
Q Consensus       218 ~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~  292 (430)
                      +|.||.++|  +|+++ +++|++++||++|++|..++|++++  |++++|+|||+||+|+|++|+++++++...+.....
T Consensus       173 ~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~~~~D~~~~s~hK~~Gp~G~g~l~v~~~~~~~~~~~~~~~  252 (405)
T d1jf9a_         173 SNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGG  252 (405)
T ss_dssp             CTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCSSCEEEEECHHHHTTCCCSSCSS
T ss_pred             CCcccccCchHHhhhHHHHcCCeeecccceeccccccchhhcCCceeeccccccccCCCceeeeechhhhcccCcccccc
Confidence            999999999  88886 7899999999999999999999887  799999999999999999999999988765432211


Q ss_pred             c-----c------ccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          293 L-----D------YKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       293 ~-----~------~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      .     +      +... ..+...||+|+..++++..+++++.+ .|++.+.++...|.+++.+.+.+.....+.  .+.
T Consensus       253 ~~~~~~~~~~~~~~~~~-~~r~e~GT~~~~~~~~l~~al~~~~~-~g~~~i~~~~~~L~~~~~~~l~~~~~~~~~--~~~  328 (405)
T d1jf9a_         253 SMIATVSLSEGTTWTKA-PWRFEAGTPNTGGIIGLGAALEYVSA-LGLNNIAEYEQNLMHYALSQLESVPDLTLY--GPQ  328 (405)
T ss_dssp             SSEEECCTTTCCEECCT-TGGGCCSSCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHTTSTTEEEE--SCT
T ss_pred             cccCccccccccccccc-hhhhcCCCCcHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHhhhhcCCccccc--CCc
Confidence            0     0      0000 11234589999999999999998875 589999999999999999999874444333  455


Q ss_pred             CCccceEEEEcCCCchhHHHHHHHHHcCCeecCCC----------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGH----------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~----------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .|++ +++|.+++.. ..++...|.++||.+..|.          ...|.+|||++.|||++|||+++++|+++.+-
T Consensus       329 ~r~~-ivsf~~~~~~-~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i~r~  403 (405)
T d1jf9a_         329 NRLG-VIAFNLGKHH-AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRL  403 (405)
T ss_dssp             TCCS-EEEEEETTCC-HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CcCc-EEEEEcCCCC-HHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            5664 7889998532 3368888999999875442          12467999999999999999999999998764

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.8e-43  Score=346.67  Aligned_cols=337  Identities=14%  Similarity=0.194  Sum_probs=267.3

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGATTQFA  148 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~gaT~a~~  148 (430)
                      -.||+|||+++|++|+++|...            ..+||+++|.++++++++.++++++.  +.+++++++++|+|++++
T Consensus         4 ~~l~~PGP~~v~~~V~~Am~~~------------~~~hr~~~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~   71 (382)
T d2bkwa1           4 DTLLIPGPIILSGAVQKALDVP------------SLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWD   71 (382)
T ss_dssp             CEECSSSSCCCCHHHHHTTSCC------------CCCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHH
T ss_pred             ccccCCCCCCCCHHHHHHhCcc------------cCCCCcHHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHH
Confidence            3689999999999999987432            36899999999999999999999996  334567777899999999


Q ss_pred             HHHhhcC---CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc---cCCCccEEEEeecCCCc
Q 043610          149 AVPLNLC---TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICANETIH  221 (430)
Q Consensus       149 ~~~~sl~---~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~~t~t  221 (430)
                      +++.+++   +|||+++++.+++++.+|...+++.+ ....+...   +++...+.++++   .++++++++++|++|.|
T Consensus        72 ~~~~~l~~~~~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~t  148 (382)
T d2bkwa1          72 IFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL---KIGESVPLELITEKLSQNSYGAVTVTHVDTST  148 (382)
T ss_dssp             HHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS---STTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred             HHHHHHHHhcCCCCceEEEEechhhhhhhhhcccccccccccccc---CCCCccchhHHHHHhhhccchheeeeeccccc
Confidence            9999985   58999999999999998888787777 55545433   255556666554   36789999999999999


Q ss_pred             cccCC--CCccc---cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCC-----
Q 043610          222 GVEFK--EYPSA---KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDK-----  288 (430)
Q Consensus       222 G~~~p--ei~~~---~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~-----  288 (430)
                      |+.+|  ++.++   +.+++++++|++|++|+.|+|++++  |++++|+|||+ ||+|+|++++++++++.+.+.     
T Consensus       149 g~~~~~~~~~~~~~~~~~~~~~~vDa~qs~g~~pid~~~~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~~~~~~~~~~  228 (382)
T d2bkwa1         149 AVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGH  228 (382)
T ss_dssp             TEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCC
T ss_pred             cccccchhhhhhccccccceeeeeecccccccccccccccCeeEEeecccccCcCCCchhhhhccHHHHhhhhhcccCCC
Confidence            99999  56553   3778999999999999999999977  79999999999 799999999999998876541     


Q ss_pred             -CCccccccc--------hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-
Q 043610          289 -TPLMLDYKI--------HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-  358 (430)
Q Consensus       289 -~p~~~~~~~--------~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-  358 (430)
                       .+++.+...        ....+.+++||++..++++.++|+++.+ .|++.+.+|++++++++++++.+.+++..+.. 
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~-~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~  307 (382)
T d2bkwa1         229 VHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILE-EGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRY  307 (382)
T ss_dssp             CSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCS
T ss_pred             cccchhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHH-hhhhhhHHHHHHHHHHHHHHhhhcccccccccC
Confidence             112222111        1134567799999999999999999885 58999999999999999999987666655532 


Q ss_pred             CCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC-C--CCeeEEeecCC-CCHHHHHHHHHHHHHHH
Q 043610          359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR-S--VGGMRASIYNA-MPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~-~--~g~iRis~~~~-~t~edv~~ll~~L~~~~  426 (430)
                      ++..+++++++|.+++   ..++.+.|+++||.+..|.. .  .+.+|||++++ ++++||++++++|+.+.
T Consensus       308 ~~~~~s~~v~~~~~~~---~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~  376 (382)
T d2bkwa1         308 PSNMSAHGLTAVYVAD---PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIK  376 (382)
T ss_dssp             SSTTBCSSCEEEECSC---HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHH
T ss_pred             chhccCCcEEEEcCCC---HHHHHHHHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHH
Confidence            3445677888898874   23788899999999887743 2  34699996554 45777777777776554

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=100.00  E-value=2.4e-42  Score=346.41  Aligned_cols=352  Identities=13%  Similarity=0.108  Sum_probs=276.3

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+.+|+++++.+++|+.|++++.+++.+.+++..+.  .+..+....+.++++|+.+++++|+++++.+++ ++++|+++
T Consensus        21 ~~~iYld~a~~~~~p~~v~~~~~~~~~~~~~n~~s~--~~~~~~~~~~~~e~aR~~ia~llga~~~~~i~~-~~~tt~~~   97 (408)
T d1t3ia_          21 HPLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRG--AHQLSVRATDAYEAVRNKVAKFINARSPREIVY-TRNATEAI   97 (408)
T ss_dssp             EECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--C--CSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEE-ESSHHHHH
T ss_pred             CCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCch--hhHHHHHHHHHHHHHHHHHHHHhCCCCcccEEe-ecchHHHH
Confidence            445899999999999999999999988765543221  223456778999999999999999985435555 58899999


Q ss_pred             HHHHhhc----CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          148 AAVPLNL----CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       148 ~~~~~sl----~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      +.++.++    +++||+|++...++.+.  .|...+++.| +++.++...   .+ ..+.+.++  ++++|++|+++|++
T Consensus        98 n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~---~~-~~~~~~l~~~~~~~t~lv~i~~~~  173 (408)
T d1t3ia_          98 NLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE---QE-SFDLEHFKTLLSEKTKLVTVVHIS  173 (408)
T ss_dssp             HHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT---TS-SBCHHHHHHHCCTTEEEEEEESBC
T ss_pred             HHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccc---cc-cccHHHhhhccCCCceEEEEeccc
Confidence            9887662    47899999877777653  4655677778 777777643   23 45677776  78999999999999


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc-
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM-  292 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~-  292 (430)
                      +.||.++|  +|+++ +++|+++++|++|++|..|+|++++  |++++|+|||+||+|+|++|++++.+....+..... 
T Consensus       174 ~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~~~p~~~g~~  253 (408)
T d1t3ia_         174 NTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGE  253 (408)
T ss_dssp             TTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTT
T ss_pred             ccccccCcHHHHhhhhhccCceeeeccceecccccccccccCCceEEeccccccCCCCccccccchhhhhcCCceecCCc
Confidence            99999999  78885 7899999999999999999999877  899999999999999999999999887654321100 


Q ss_pred             ---------ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC-CC
Q 043610          293 ---------LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK-SV  362 (430)
Q Consensus       293 ---------~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~-~~  362 (430)
                               +.+.. ...+...||+++..++++..+++++.+ .|++++.+|..++.+++++.+.+..++.++...+ ..
T Consensus       254 ~~~~~~~~~~~~~~-~~~r~e~Gt~~~~~~~~l~~al~~~~~-~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  331 (408)
T d1t3ia_         254 MIAEVFFDHFTTGE-LPHKFEAGTPAIAEAIALGAAVDYLTD-LGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHG  331 (408)
T ss_dssp             SEEEECSSCEEECC-TTGGGCCSSCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGS
T ss_pred             ccccccccccccCC-chhhhcCCcHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHhHHhhhhccCccccccCCCcccc
Confidence                     00001 112335699999999999999999885 5999999999999999999999866777764222 12


Q ss_pred             CccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC----------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          363 RSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR----------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~----------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      +...+++|.+++  .+. ++++.|.++||.+..|..          ..|.||||++.|||++|||+++++|+++++.++
T Consensus       332 ~~~~iv~f~~~~--~~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L~~~~~~f~  408 (408)
T d1t3ia_         332 DRAALASFNVAG--LHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFS  408 (408)
T ss_dssp             CBCSEEEEEETT--BCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred             CcceEEEEEeCC--CCHHHHHHHHhhCCcEEecCcccccHHHHhhcCCccEEEECCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            223578899885  334 788899999998765531          245799999999999999999999999988653

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=100.00  E-value=2.3e-42  Score=341.40  Aligned_cols=339  Identities=16%  Similarity=0.228  Sum_probs=270.7

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      -|+.+||+|||+++|++|+++|..            +.++||+++|.++++++|+.|++++|++++|. +++++|||+++
T Consensus        16 ~p~~~l~~PGP~~v~~~Vl~am~~------------~~~~hr~~ef~~i~~~~r~~l~~ll~~~~~~~-i~~~g~gT~~~   82 (377)
T d1vjoa_          16 VPSRLLLGPGPSNAHPSVLQAMNV------------SPVGHLDPAFLALMDEIQSLLRYVWQTENPLT-IAVSGTGTAAM   82 (377)
T ss_dssp             CCCCEECSSSCCCCCHHHHHHHSS------------CCCCTTSHHHHHHHHHHHHHHHHHHTCCCSCE-EEESSCHHHHH
T ss_pred             CCcceeecCCCCCCCHHHHHHhCc------------CCCCCCCHHHHHHHHHHHHHHHHHhCCCCCeE-EEEcCcHHHHH
Confidence            346899999999999999999743            24789999999999999999999999987755 55689999999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc---cCCCccEEEEeecCCCccc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICANETIHGV  223 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~~t~tG~  223 (430)
                      ++++.+++.+|+++++...++++..+...++..+ ....+...    ++...+.+..+   .++++++|+++|++|.||+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~  158 (377)
T d1vjoa_          83 EATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKP----WGEVFSLEELRTALETHRPAILALVHAETSTGA  158 (377)
T ss_dssp             HHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC----TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred             HHHHHhccccccccceeeechhhhhhhhhhhhhcccccccccC----CCCcccchhhhhhhhcCcceeeeeeeeecccee
Confidence            9999999999999999999999887776666666 44444332    23233333332   4678999999999999999


Q ss_pred             cCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCccEEEEEcHHHHhccCCCC----Cccc
Q 043610          224 EFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQDKT----PLML  293 (430)
Q Consensus       224 ~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~~~----p~~~  293 (430)
                      ++|  +|+++ +++|+++++|++|++|..++|++++  |++++++|||+ ||+|+|+++++++.++...+..    .++.
T Consensus       159 ~~~i~~i~~~~~~~g~~~~vDa~~~~g~~~~~~~~~~~d~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (377)
T d1vjoa_         159 RQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYL  238 (377)
T ss_dssp             ECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTT
T ss_pred             eechhhhhhhhhhccceEEEecchhhhhhhhcccccccceeeecccccccCCCEEEEecchhhHHhhhhccCCCCcceee
Confidence            999  78886 7899999999999999999999887  69999999999 6999999999999988643321    1111


Q ss_pred             cccc----hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEE
Q 043610          294 DYKI----HDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP  369 (430)
Q Consensus       294 ~~~~----~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~  369 (430)
                      ....    ........+|+++..+.++..++..+. .+|.+.+.++.+++..++++.+.+ .|+..+ .+++.|++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~~~~~~~l~~~l~~-~~~~~~-~~~~~rs~~v~~  315 (377)
T d1vjoa_         239 DMNLLGKYWGSERVYHHTAPINLYYALREALRLIA-QEGLANCWQRHQKNVEYLWERLED-IGLSLH-VEKEYRLPTLTT  315 (377)
T ss_dssp             CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHHHHHHHH-TTCCBS-SCGGGBCSSEEE
T ss_pred             ccchhhhccCcccccccccceechhhhHHHHhhhh-hcCchHHHHHHHHHhhhhhhhhhc-cCceee-cChHhcCCeEEE
Confidence            1111    012234557888888888888887766 469999999999999999999996 677766 467789999999


Q ss_pred             EEcCCCchhH-HHHHHHH-HcCCeecCCCCC--CCeeEEee-cCCCCHHHHHHHHHHHHHHHH
Q 043610          370 FTLEKSDLEA-EFVKEAA-KEKMVQLKGHRS--VGGMRASI-YNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       370 f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~~--~g~iRis~-~~~~t~edv~~ll~~L~~~~~  427 (430)
                      |.+++ +.+. ++++.|. +.||.+..|++.  .+.||||+ +.++++|||++++++|+++++
T Consensus       316 ~~~p~-~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         316 VCIPD-GVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             EECCT-TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             EECCC-CCCHHHHHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHHhC
Confidence            99986 3444 7888875 559998877754  34699996 556789999999999999874

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=6.2e-40  Score=325.06  Aligned_cols=347  Identities=14%  Similarity=0.091  Sum_probs=267.4

Q ss_pred             CCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           67 QEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        67 ~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      ..+++|++++|.+++|..|+++|.+++.++...|...   ...+..+.+.++++|+.|++++|++++ +|+++ +|+|++
T Consensus         5 l~~~~yld~~~~~~~p~~v~ea~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~r~~la~~~~~~~~-~i~~~-~g~t~a   79 (381)
T d1elua_           5 LANKTYFNFGGQGILPTVALEAITAMYGYLQENGPFS---IAANQHIQQLIAQLRQALAETFNVDPN-TITIT-DNVTTG   79 (381)
T ss_dssp             GTTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSS---HHHHHHHHHHHHHHHHHHHHHTTSCGG-GEEEE-SSHHHH
T ss_pred             CCCCEEeeCCcccCCCHHHHHHHHHHHHHhhcCCCcc---chhhHHHHHHHHHHHHHHHHHhCCCcc-cEEEE-CChHHH
Confidence            3567999999999999999999999887654444321   112345668889999999999999876 78775 789999


Q ss_pred             HHHHHhhc-CCCCCcEEEEeCChhHH--HHHHHHHHhC-CceEEecCCCCcCCCCCC-ccccc--cCCCccEEEEeecCC
Q 043610          147 FAAVPLNL-CTPNDPVDYIVTGSWGD--KAFKEAQKFC-NPQVIWSGKAEKYTKIPN-FDALE--QNPDAKYLHICANET  219 (430)
Q Consensus       147 ~~~~~~sl-~~~gd~vl~~~~g~~~~--~~~~~a~~~g-~~~~v~~~~~~~~g~~~d-~~~l~--i~~~~~lv~i~~~~t  219 (430)
                      ++.++.++ +++||+|++...++.+.  .|...+++.| ++..++....   ....+ .+.++  ++++|++|++++++|
T Consensus        80 ~~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~---~~~~~~~~~l~~~i~~~t~~v~i~~~~n  156 (381)
T d1elua_          80 CDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAAT---LNQGDAAAVLANHLGPKTRLVILSHLLW  156 (381)
T ss_dssp             HHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGG---SSSSCHHHHHHTTCCTTEEEEEEESBCT
T ss_pred             hhhcchhhhhcCCceEEEeccccceeeeccccccccccccccccccccc---cccchHHHHHHhhhcccccccccccccc
Confidence            99999998 58899999877766553  3445566778 7777776431   11122 23454  789999999999999


Q ss_pred             CccccCC--CCccc-c----CCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCCC
Q 043610          220 IHGVEFK--EYPSA-K----NSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKT  289 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~----~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~  289 (430)
                      +||.+.|  +|.++ +    .+++++++|++|++|..|+|++++  |++++++|||++ |.|+|++|++++..+.+.+..
T Consensus       157 ~tG~~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~~~~~~D~~~~s~~K~~~~p~G~g~l~~~~~~~~~~~p~~  236 (381)
T d1elua_         157 NTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTY  236 (381)
T ss_dssp             TTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCS
T ss_pred             cccccchhhHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccchhhHHHhhHHHHHhcCccc
Confidence            9999999  77775 3    367999999999999999999876  799999999995 999999999999988765432


Q ss_pred             Cccc-----------cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610          290 PLML-----------DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV  358 (430)
Q Consensus       290 p~~~-----------~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~  358 (430)
                      ....           .+.. .......||+++..++++.++++.+.+.+..+.+.++..+++++++++|++..|+.++. 
T Consensus       237 ~~~~~~~~~~~~~~~~~~~-~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-  314 (381)
T d1elua_         237 VGWRSITYGAKGEPTGWAE-GGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLA-  314 (381)
T ss_dssp             CCTTTEEECTTSCEEEECS-GGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESC-
T ss_pred             ccccccccccccccccccc-cccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEecC-
Confidence            2111           0100 01122458999999999999999988776667778999999999999999877888875 


Q ss_pred             CCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          359 EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       359 ~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ++..+++ +++|.+++.....++.+.|+++||.+.. ....+++|||++.|||++|||+++++|+++
T Consensus       315 ~~~~~~~-~vsf~~~~~~~~~~i~~~L~~~gi~v~~-~~~~~~lRis~~~~nt~edid~ll~~l~e~  379 (381)
T d1elua_         315 TSAPQAG-LVSFTVDSPLGHRAIVQKLEEQRIYLRT-IADPDCIRACCHYITDEEEINHLLARLADF  379 (381)
T ss_dssp             SSCCSSS-EEEEEECSSSCHHHHHHHHHHTTEECEE-ETTTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             CCCcccc-EEEEEcCCCCCHHHHHHHHHhCCcEEEe-cCCCCEEEEecCCCCCHHHHHHHHHHHHhh
Confidence            3334564 7889887532223688899999987532 123468999999999999999999999875

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.3e-36  Score=296.86  Aligned_cols=336  Identities=15%  Similarity=0.113  Sum_probs=254.2

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAA  149 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~  149 (430)
                      ++|++++|.+++|+.|++++.+++.+.++++.+   .+..+....+.++++|+.+++++|++++ +|+|+ +|+|++++.
T Consensus         2 ~iyld~a~~~~~p~~v~ea~~~~~~~~~~np~~---~~~~~~~~~~~~~~aR~~ia~l~~~~~~-~i~~~-~~~T~~l~~   76 (376)
T d1eg5a_           2 RVYFDNNATTRVDDRVLEEMIVFYREKYGNPNS---AHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFT-SCATESINW   76 (376)
T ss_dssp             CEECBTTTCCCCCHHHHHHHHHHHHTCCCCTTC---SSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEE-SCHHHHHHH
T ss_pred             EEEEECcccccCCHHHHHHHHHHHHHcCCCCcc---ccHHHHHHHHHHHHHHHHHHHHcCCCCC-cEEEE-CCHHHHHHh
Confidence            689999999999999999999998876555443   2234567788899999999999999886 78876 789999998


Q ss_pred             HHhhc----CCCCCcEEEEeCChhH--HHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          150 VPLNL----CTPNDPVDYIVTGSWG--DKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       150 ~~~sl----~~~gd~vl~~~~g~~~--~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      ++.++    ..+|+.+++. ..+++  ..+.+.+++.| +++.++.++   .+ .+|+++++  ++++|++|+++|++++
T Consensus        77 ~~~~~~~~~~~~g~~v~~~-~~~~~~~~~~~~~~~~~g~~v~~vp~~~---~~-~id~~~l~~~i~~~t~lv~is~v~~~  151 (376)
T d1eg5a_          77 ILKTVAETFEKRKRTIITT-PIEHKAVLETMKYLSMKGFKVKYVPVDS---RG-VVKLEELEKLVDEDTFLVSIMAANNE  151 (376)
T ss_dssp             HHHHHHHHTTTTCCEEEEC-TTSCHHHHHHHHHHHHTTCEEEECCBCT---TS-CBCHHHHHHHCCTTEEEEEEESBCTT
T ss_pred             hhhcccccccccCcccccc-cccchhhHHHHHHHHhcCCEEEEEcCCC---CC-eECHHHHHHhcCCCceEEEEECCccc
Confidence            87653    3556666543 34333  23445566678 888887753   34 57888887  8999999999999999


Q ss_pred             ccccCC--CCccc---cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccc
Q 043610          221 HGVEFK--EYPSA---KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLML  293 (430)
Q Consensus       221 tG~~~p--ei~~~---~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~  293 (430)
                      ||.++|  ++.++   ++.+++++||++|++|..|+|++++  |++++|+|||+||+|.|++|++++..  +   .|.+.
T Consensus       152 tG~~~~~~~i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~~~~~--~---~p~~~  226 (376)
T d1eg5a_         152 VGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVP--I---RPLIH  226 (376)
T ss_dssp             TCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTSC--C---CCSBC
T ss_pred             cceeeeehhhhhhhhhcccCceeEEEeeeccccccccccccCccceecccceeecCCCceeEEeccCcc--c---CCccc
Confidence            999999  66664   4779999999999999999999876  79999999999999999999987642  2   23333


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                      ++..  ......++.+......+..+.+...  .+......+...+..++.++|.. .+..... ....+...++.+.++
T Consensus       227 g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~-~~~~~~~~~~~~~~~  300 (376)
T d1eg5a_         227 GGGQ--ERGLRSGTQNVPGIVGAARAMEIAV--EELSEAAKHMEKLRSKLVSGLMN-LGAHIIT-PLEISLPNTLSVSFP  300 (376)
T ss_dssp             SSCT--TTTTBCSCCCHHHHHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHT-TTCEECS-CTTSBCTTEEEEECT
T ss_pred             CCCC--cccccCCcccchhhhhHHHHhhccc--cchhhhhhhhhhhhhhhcccccc-ccccccc-cccccccceeeeccC
Confidence            3221  1223457888888888887777654  36778888888888999999986 4444443 233344467888887


Q ss_pred             CCchhHHHHHHHHHcCCeecCCCC---------------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          374 KSDLEAEFVKEAAKEKMVQLKGHR---------------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       374 ~~~~~~~~~~~L~~~Gi~~~~g~~---------------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +.. ..++...|.++||.+..|.-                     ..|+||||++.|||++|||+++++|++++.
T Consensus       301 ~~~-~~~~~~~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~  374 (376)
T d1eg5a_         301 NIR-GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS  374 (376)
T ss_dssp             TCC-HHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCC-HHHHHHHHhhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence            532 23688889999998654420                     023699999999999999999999999875

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.3e-37  Score=304.58  Aligned_cols=341  Identities=13%  Similarity=0.096  Sum_probs=257.2

Q ss_pred             CceeecCCCCCCcHHHHHHHHHHhhhc--cCCCCcccccCC-CcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           70 RVFNFAAGPANLPEKVLLKAQSELYNW--RGSGMSVMEMSH-RGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        70 ~~~l~~~gp~~~~~~V~~a~~~~~~~~--~~~g~s~~~~~~-~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      .+|+++++.+|+++.|+++|.+++.+.  ++++.+   ..| .+....+.++++|+.+++++|++++ +|+|+ +|+|++
T Consensus         3 ~iYlD~aa~~p~~~~v~ea~~~~~~~~~~~~np~~---~~~~~~~~~~~~~~~~R~~iA~~lg~~~~-~I~~~-~~~t~~   77 (391)
T d1p3wa_           3 PIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPAS---RSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFT-SGATES   77 (391)
T ss_dssp             SEECBTTTCCCCCHHHHHHHHTTTSTTSCCCCTTC---TTSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SSHHHH
T ss_pred             eEEeeCccccCCCHHHHHHHHHHHHhccccCCCch---hhhHHHHHHHHHHHHHHHHHHHHcCCCCC-cEEEE-CCHHHH
Confidence            379999999999999999999987532  222222   233 2456678899999999999999986 78875 789999


Q ss_pred             HHHHHhhc----CCCCCcEEEEeCChhHH-HHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          147 FAAVPLNL----CTPNDPVDYIVTGSWGD-KAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       147 ~~~~~~sl----~~~gd~vl~~~~g~~~~-~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      ++.++.++    +++||+|++.+..+.+. .+...++..| +++.++...   .+ .+|+++++  ++++|++|+++|++
T Consensus        78 l~~~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~---~~-~~d~~~~~~~i~~~T~lv~is~~~  153 (391)
T d1p3wa_          78 DNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR---NG-IIDLKELEAAMRDDTILVSIMHVN  153 (391)
T ss_dssp             HHHHHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT---TS-CCCHHHHHHHCCTTEEEEECCSBC
T ss_pred             HHHHHhhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCC---CC-eEcHHHHHHhCCCCcEEEEEECCC
Confidence            99888764    47899999887776654 2334455667 887787643   34 47888887  89999999999999


Q ss_pred             CCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCccc
Q 043610          219 TIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLML  293 (430)
Q Consensus       219 t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~  293 (430)
                      |+||.++|  +|+++ +++|+++++|++|++|..|+|+..+  |++++++|||+||+|+|+++++++.+....+   .+.
T Consensus       154 n~tG~~~~~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~~~~~D~~~~s~~k~~g~~g~g~~~~~~~~~~~~~~---~~~  230 (391)
T d1p3wa_         154 NEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEA---QMH  230 (391)
T ss_dssp             TTTCCBCCHHHHHHHHHHHTCEEEEECTTTBTTBCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCC---SSC
T ss_pred             CCCeeECCHHHHHHHhccCCcEEEEeeccccCCccccchhccccccccccccccCCCceEEEEEecchhcccCC---ccc
Confidence            99999999  89886 7899999999999999999999877  7999999999999999999999987765433   222


Q ss_pred             cccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcC
Q 043610          294 DYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLE  373 (430)
Q Consensus       294 ~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~  373 (430)
                      ++  ..+.+...++.+.....++..+++...+  ......++.+++...+.++|.+..+..+. .....+.+.++.|.++
T Consensus       231 gg--~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~  305 (391)
T d1p3wa_         231 GG--GHERGMRSGTLPVHQIVGMGEAYRIAKE--EMATEMERLRGLRNRLWNGIKDIEEVYLN-GDLEHGAPNILNVSFN  305 (391)
T ss_dssp             SS--CTTTTTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTTTTSTTEEEC-SCTTTSCTTEEEEEET
T ss_pred             CC--ccccCcccCcchhhhhhhhhhhhhHHHH--HhhHHHHHHHHHHHHHHHHHHhhcCeeec-ccccccCceEEEEEeC
Confidence            21  1223345578888888888888876654  24566788889999999999875555544 3444566677888877


Q ss_pred             CCchhHHHHHHHHHcCCe----ecCCC---------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          374 KSDLEAEFVKEAAKEKMV----QLKGH---------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       374 ~~~~~~~~~~~L~~~Gi~----~~~g~---------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ... ..++...|.+.+|.    +..+.               ...|.||||++.|||++||++++++|++++++
T Consensus       306 ~~~-~~~~~~~l~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~  378 (391)
T d1p3wa_         306 YVE-GESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR  378 (391)
T ss_dssp             TSC-HHHHHHHTTTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCC-hHHHHHHhCCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence            522 23566666443332    11110               01256999999999999999999999998764

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=100.00  E-value=9.2e-35  Score=289.56  Aligned_cols=348  Identities=13%  Similarity=0.136  Sum_probs=255.7

Q ss_pred             ccccCCCCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           62 QIQSGQEDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        62 ~~~~~~~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      +.+...++.+|+++++.+++|..|++++.+++.+.++++..   .++.+..+.+.++++|+.+++++|++++ +++|+ +
T Consensus        20 ~~F~~~~~~iYLd~as~g~~p~~v~~a~~~~l~~~~~~~~~---~~~~~~~~~~~~e~~R~~iA~llga~~~-ei~~~-~   94 (404)
T d1qz9a_          20 QQFALPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLI---RSWNSAGWRDLSERLGNRLATLIGARDG-EVVVT-D   94 (404)
T ss_dssp             GGBCCCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGG---GHHHHTSGGGHHHHHHHHHHTTTTCCTT-SEEEC-S
T ss_pred             hcCCCCCCCEEcCCcccccCCHHHHHHHHHHHHHHhcccCc---ccccchhHHHHHHHHHHHHHHHhCCCCC-cEEEe-c
Confidence            44556677899999999999999999999998765444321   1111234567889999999999999987 77775 7


Q ss_pred             cHHHHHHHHHhhc------CCCCCcEEEEeCChhHHH--HHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCcc
Q 043610          142 GATTQFAAVPLNL------CTPNDPVDYIVTGSWGDK--AFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAK  210 (430)
Q Consensus       142 gaT~a~~~~~~sl------~~~gd~vl~~~~g~~~~~--~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~  210 (430)
                      ++|++++.++.+.      ..+++.+++.+..+++..  +.....+.+ ......       + .++.++++  ++++|+
T Consensus        95 ~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~~T~  166 (404)
T d1qz9a_          95 TTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLR-------L-VDSPEELPQAIDQDTA  166 (404)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEE-------E-ESSGGGHHHHCSTTEE
T ss_pred             CchHHHHHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceecc-------c-cccchhHHHhcCCCce
Confidence            8999998776542      257899998887766542  222222222 221111       2 24455555  899999


Q ss_pred             EEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCccc-cCCc-cEEEEEcHHHHh
Q 043610          211 YLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNV-GPSG-VTIVIVRKDLLG  283 (430)
Q Consensus       211 lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~-gp~G-~g~l~v~~~~~~  283 (430)
                      +|+++|++|.||.++|  +|+++ +++|++++||++|++|..++|++++  |++++++|||+ +|+| .|++|.++++++
T Consensus       167 lV~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~~~~~~  246 (404)
T d1qz9a_         167 VVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCD  246 (404)
T ss_dssp             EEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTT
T ss_pred             EEEEecccccccceecHHHHhccccccccceeEEeeccccccccccccccceEEEEechhhcccCCceEEEEEechhhhh
Confidence            9999999999999999  89885 7899999999999999999999877  79999999999 5555 899999998877


Q ss_pred             ccCCCCCcccc----------ccch-hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH---Hc
Q 043610          284 NAQDKTPLMLD----------YKIH-DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVI---DG  349 (430)
Q Consensus       284 ~~~~~~p~~~~----------~~~~-~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l---~~  349 (430)
                      .+.+....+..          +... .......+|++..+...+..+++++. ..+.+.+.++...+...+.+.+   ..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~~  325 (404)
T d1qz9a_         247 LVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFA-QTDMASLRRKSLALTDLFIELVEQRCA  325 (404)
T ss_dssp             TSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHH-HhhHHHHHHHHHHhHHHHHHHHHhhcc
Confidence            65431111110          0000 01123457899999999999998876 4588989888888777655543   34


Q ss_pred             cCCceecCC-CCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeec-CCCCHHHHHHHHHHHHHHHH
Q 043610          350 SNGFYKCPV-EKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIY-NAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       350 ~~G~~~~~~-~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~-~~~t~edv~~ll~~L~~~~~  427 (430)
                      ..|++++.. ++..|+ .+++|.+++   ..++.+.|.++||.+.  .+..+.||||++ .|||++||++++++|+++++
T Consensus       326 ~~~~~i~~p~~~~~r~-~~vsf~~~~---~~~v~~~L~~~gi~~~--~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~  399 (404)
T d1qz9a_         326 AHELTLVTPREHAKRG-SHVSFEHPE---GYAVIQALIDRGVIGD--YREPRIMRFGFTPLYTTFTEVWDAVQILGEILD  399 (404)
T ss_dssp             TSCCEECSCSSGGGBC-SEEEEECTT---HHHHHHHHHTTTEECE--EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCcccee-eEEEEecCC---HHHHHHHHHHCCCEEe--ecCCCeEEEECCCCCCCHHHHHHHHHHHHHHHH
Confidence            578888743 455566 468898874   3379999999998752  234467999995 69999999999999999998


Q ss_pred             hh
Q 043610          428 KH  429 (430)
Q Consensus       428 ~~  429 (430)
                      +.
T Consensus       400 ~~  401 (404)
T d1qz9a_         400 RK  401 (404)
T ss_dssp             HT
T ss_pred             hC
Confidence            74

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.94  E-value=2.7e-25  Score=217.02  Aligned_cols=324  Identities=13%  Similarity=0.040  Sum_probs=209.2

Q ss_pred             CCcHHHHHHHHHHhhhccCCCCcc--cccCCCcH--HHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC
Q 043610           80 NLPEKVLLKAQSELYNWRGSGMSV--MEMSHRGK--EFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC  155 (430)
Q Consensus        80 ~~~~~V~~a~~~~~~~~~~~g~s~--~~~~~~~~--~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~  155 (430)
                      .+++++++++.++.+     |++.  +....+..  ....+.+.+++.+|+++|++   +++++ +|+|+|+.+++.+++
T Consensus        13 ~l~~~a~~a~~~~~~-----g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~g~e---~~~~t-~g~t~a~~~~~~al~   83 (364)
T d2e7ja1          13 KLTEEARQALLEWGD-----GYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD---VARVT-NGAREAKFAVMHSLA   83 (364)
T ss_dssp             CCCHHHHHHHHHC-------------------------CCHHHHHHTHHHHHTTSS---EEEEE-SSHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHhc-----CCchhccccccccccccChHHHHHHHHHHHHHhCcC---EEEEE-CcHHHHHHHHHHHHh
Confidence            477889999887543     2221  10011101  11136778899999999985   67765 789999999999999


Q ss_pred             CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-----CCccEEEEeecCCCccccCC-
Q 043610          156 TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-----PDAKYLHICANETIHGVEFK-  226 (430)
Q Consensus       156 ~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-----~~~~lv~i~~~~t~tG~~~p-  226 (430)
                      +|||+|++....|++..  ..++..| +++.++..+.. . ..+|+++++  ++     .++++|+++|++|+||.+.| 
T Consensus        84 ~~gd~Vi~~~~~h~s~~--~~~~~~g~~v~~v~~~~~~-~-~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~l  159 (364)
T d2e7ja1          84 KKDAWVVMDENCHYSSY--VAAERAGLNIALVPKTDYP-D-YAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDV  159 (364)
T ss_dssp             CTTCEEEEETTCCHHHH--HHHHHTTCEEEEECCCCTT-T-CCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCH
T ss_pred             CCCcEEEeecccccccc--hHHHhccceEEEeeecccc-c-cccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeecc
Confidence            99999998777776642  3455678 88888775421 2 247888775  32     34678999999999999999 


Q ss_pred             -CCccc-cCCCcEEEEeccCcCCCCccccccc--cEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhc
Q 043610          227 -EYPSA-KNSTGILVADMSSNFCSKPVDVTRF--GVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDEN  301 (430)
Q Consensus       227 -ei~~~-~~~g~~lvvD~a~s~G~~~idl~~~--d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~  301 (430)
                       +|.++ +++|+++++|++|++|..++++.++  |++++|+||++| |.|+|+++++++.++........+.. ..   .
T Consensus       160 ~~I~~ia~~~~i~livD~a~~~g~~~~~~~~~g~D~~~~S~~K~~~~~g~~g~l~~~~~~~~~~~~~~~~~~~-~~---~  235 (364)
T d2e7ja1         160 KKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKN-KE---V  235 (364)
T ss_dssp             HHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTT-SB---G
T ss_pred             hhheeccccccchhhccccchhhhhhhcccccccceeeeccccccCCCCCEEEEEECHHHHHHHHhhccccCc-cc---c
Confidence             88886 7999999999999999999998876  799999999997 55699999999887664321111110 00   0


Q ss_pred             CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCC------
Q 043610          302 NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKS------  375 (430)
Q Consensus       302 ~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~------  375 (430)
                      ....++.+....+++..+++.+.+.  ++...++ .+.++++.+++.+ .|+..+...+ ... ..+.+..+..      
T Consensus       236 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~-~~~~~~~~~~l~~-~g~~~~~~~~-~~~-~~~~~~~~~~~~~~~~  309 (364)
T d2e7ja1         236 ELLGCTARGATIITLMASFPHVRER--IKRWDEE-VEKARRFAAEMEK-LGIKQLGDNP-HNH-DLMFFHAEVLYEISKK  309 (364)
T ss_dssp             GGTTCCCCSHHHHHHHHHHHHHHHH--GGGHHHH-HHHHHHHHHHHHH-TTCEEESSSS-CCS-SEEEEECHHHHHHHHH
T ss_pred             cccccccchhHHHHHHHHHHHHHHH--HHHHHHH-HHHHHHHHHHHHH-cCCeecCCCC-CCc-ceEEEeccchHHHHHH
Confidence            0112344555566666677655432  2233333 3456678888886 6777664222 222 2233333210      


Q ss_pred             --chhHHHHHHHHHcCCeec-CCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          376 --DLEAEFVKEAAKEKMVQL-KGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       376 --~~~~~~~~~L~~~Gi~~~-~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                        .....+...|...|+... +|.  ...+|++.+ .+|+|||++++++|++++++.
T Consensus       310 ~~~~~~~~~~~l~~~~~~~~~~g~--~~~~~~~~~-~~t~edid~~~~~l~ei~~~y  363 (364)
T d2e7ja1         310 AKGGRFFLYRELKSRKIHGIKPGL--TRYFKLSTY-GLSDEEVDYVLNAFKEIIEKY  363 (364)
T ss_dssp             SSSGGGHHHHHHHHTTEECSCTTC--CSEEEEECT-TCCHHHHHHHHHHHHHHHHHC
T ss_pred             hhccchHHHHHHHhcCCceecCCC--cceEEEecc-CCCHHHHHHHHHHHHHHHHHh
Confidence              001123344555565432 222  235777754 468999999999999999875

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.93  E-value=8.7e-25  Score=216.43  Aligned_cols=333  Identities=13%  Similarity=0.138  Sum_probs=227.9

Q ss_pred             cccCCCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEE
Q 043610           63 IQSGQEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLF  138 (430)
Q Consensus        63 ~~~~~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~  138 (430)
                      .+...++++++|+.|-  .++|+.+++++.+.+++    +...|......+   ++.+.+.+.+.+..|.  +++ +|++
T Consensus        24 ~~~~~g~~vi~l~~G~p~~~~p~~v~~a~~~~~~~----~~~~Y~~~~G~~---~lR~aia~~~~~~~g~~~~~~-~i~i   95 (388)
T d1j32a_          24 AMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQ----GKTRYGPAAGEP---RLREAIAQKLQRDNGLCYGAD-NILV   95 (388)
T ss_dssp             HHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHT----TCCSCCCTTCCH---HHHHHHHHHHHHHHCCCCCGG-GEEE
T ss_pred             HHHHCCCCeEECCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCCCCCH---HHHHHHHHHHHHhcccCCCCc-eEEE
Confidence            3555567899999874  56789999999988764    211121211123   3344555666666665  444 6776


Q ss_pred             EeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEe
Q 043610          139 LQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHIC  215 (430)
Q Consensus       139 ~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~  215 (430)
                       ++|+++++..++.++++|||.|++..+++..+.  ..++..| +++.++...+  .+..+|+++++  +++++++++++
T Consensus        96 -t~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~--~~~~~~~~~~v~~~~~~~--~~~~~d~~~l~~~~~~~~~~~~~~  170 (388)
T d1j32a_          96 -TNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYP--EMVKLAEGTPVILPTTVE--TQFKVSPEQIRQAITPKTKLLVFN  170 (388)
T ss_dssp             -ESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHH--HHHHHTTCEEEEECCCGG--GTTCCCHHHHHHHCCTTEEEEEEE
T ss_pred             -cCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHH--HHHHHhcCeEEEEecccc--cccCCCHHHHHHhCCCCCeEEEEC
Confidence             488999999999999999999998887776643  3444556 6666666443  23357888887  78999999999


Q ss_pred             ecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC----cccccc-----c--cEEEeCCCccccCCc--cEEEE
Q 043610          216 ANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK----PVDVTR-----F--GVIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       216 ~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~idl~~-----~--d~~~~s~~K~~gp~G--~g~l~  276 (430)
                      +++||||..++  +   |.++ +++|+++++|++++....    ...+..     .  .+++.|++|.+|.+|  +|+++
T Consensus       171 ~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~  250 (388)
T d1j32a_         171 TPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA  250 (388)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred             CCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEEEE
Confidence            99999999999  3   4443 589999999998853322    111111     1  278899999999888  89999


Q ss_pred             EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      .++++++.+..       .    .. .....++...+.++..+++...  ..++..++++++.++.+.+.|.+..|+.+.
T Consensus       251 ~~~~~~~~~~~-------~----~~-~~~~~~~~~~q~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~  316 (388)
T d1j32a_         251 GPVPLVKAATK-------I----QG-HSTSNVCTFAQYGAIAAYENSQ--DCVQEMLAAFAERRRYMLDALNAMPGLECP  316 (388)
T ss_dssp             CCHHHHHHHHH-------H----HH-TTTCSCCHHHHHHHHHHHHSCS--HHHHHHHHHHHHHHHHHHHHHHTCTTCBCC
T ss_pred             ECHHHHHHHHH-------h----hh-hccccccHHHHHHHhhcccchH--HHHHHHHHHHHHHHHHHHHHHHhCCCCEec
Confidence            99988775321       0    00 1113556666776666664321  246778888899999999999876677654


Q ss_pred             CCCCCCCccceEEEEcCCCchhH-HHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          357 PVEKSVRSFMNVPFTLEKSDLEA-EFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .  +  .+...+.+.++....+. +++++| .++||.+.+|..  ..+++|++++  .+++++++.++.|++++++
T Consensus       317 ~--p--~gg~~l~~~l~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~--~~~e~l~~al~rl~~~l~~  386 (388)
T d1j32a_         317 K--P--DGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGMERLEKFLHG  386 (388)
T ss_dssp             C--C--CBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             C--C--CceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHH
Confidence            2  1  12223334554322333 788776 567999988753  3568999997  4889999999999998864

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.92  E-value=4.7e-24  Score=210.62  Aligned_cols=331  Identities=12%  Similarity=0.129  Sum_probs=220.9

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~~ga  143 (430)
                      .+++++++.|-  .++|+.|++++.+.+.+    +...|.....   ..++.+.+.+.+.+..+.  .++.+|++ ++|+
T Consensus        24 ~~dvi~l~~g~p~~~~p~~v~~~~~~a~~~----~~~~Y~~~~G---~~~lr~aia~~~~~~~~~~~~~~~~i~~-t~G~   95 (388)
T d1gdea_          24 MKDVISLGIGEPDFDTPQHIKEYAKEALDK----GLTHYGPNIG---LLELREAIAEKLKKQNGIEADPKTEIMV-LLGA   95 (388)
T ss_dssp             CTTCEECCCCSCCSCCCHHHHHHHHHHHHT----TCCSCCCTTC---CHHHHHHHHHHHHHHHCCCCCTTTSEEE-ESST
T ss_pred             CCCeEECCCCCCCCCCCHHHHHHHHHHHhc----CccCCCCCcC---CHHHHHHHHHHHHhhccccCCChheeee-ccCc
Confidence            46788888874  46789999999988764    2111211111   222233344444443342  22236766 4789


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      ++++..++..+++|||+|++..+.|.++.  ..++..| +++.++..++++|  .+|+++|+  ++++++++++++++||
T Consensus        96 ~~~l~~~~~~l~~~gd~vlv~~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~~~~~~~~i~~~~P~NP  171 (388)
T d1gdea_          96 NQAFLMGLSAFLKDGEEVLIPTPAFVSYA--PAVILAGGKPVEVPTYEEDEF--RLNVDELKKYVTDKTRALIINSPCNP  171 (388)
T ss_dssp             THHHHHHHTTTCCTTCEEEEEESCCTTHH--HHHHHHTCEEEEEECCGGGTT--CCCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred             chHHHHHHHHhcCCCCEEEECCCCcHHHH--HHHHHcCCEEEEeecccccCC--CCCHHHHHHhCccCCeEEEECCCcCC
Confidence            99999999999999999998888776643  3466678 8888887653334  47888887  7889999999999999


Q ss_pred             ccccCC--C---Cccc-cCCCcEEEEeccCcCCCC----cc---ccccc-c--EEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          221 HGVEFK--E---YPSA-KNSTGILVADMSSNFCSK----PV---DVTRF-G--VIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       221 tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~----~i---dl~~~-d--~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      ||.+++  +   |.++ ++++++++.|++++....    ..   .+... +  +++.|++|.+|.+|  +|+++++++.+
T Consensus       172 tG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ii~~~~~~  251 (388)
T d1gdea_         172 TGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWII  251 (388)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHH
T ss_pred             CCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccccEEEEEeeccch
Confidence            999999  3   4443 589999999999763321    11   12222 3  78899999999778  99999999887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+...            ......+++...+.++..+++.-.....++...+++.+.+..+.+.+.+ .++....  +  
T Consensus       252 ~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~--p--  314 (388)
T d1gdea_         252 ERMVKF------------QMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE-MGLPTVK--P--  314 (388)
T ss_dssp             HHHHHH------------HHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCC--C--
T ss_pred             hhhhhc------------cccccccccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhh-ccccccC--C--
Confidence            653210            0011235556666666666642111113566777778888888988886 5555432  2  


Q ss_pred             CccceEEEEcCCCchhH-HHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          363 RSFMNVPFTLEKSDLEA-EFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~-~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      .+...+.+.+++.+.+. ++.++| +++||.+.+|..    ..+++|||++  ++++++++.++.|++++++.
T Consensus       315 ~gg~fl~~~l~~~~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~--~~~e~l~~al~rL~~~l~e~  385 (388)
T d1gdea_         315 KGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA--TAYEKLEEAMDRMERVLKER  385 (388)
T ss_dssp             CBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEEECCCCCCCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence            12223334555323333 788775 567999887642    2467999997  47899999999999988764

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.5e-23  Score=209.43  Aligned_cols=333  Identities=13%  Similarity=-0.037  Sum_probs=232.3

Q ss_pred             CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcE----EEEEeCcHHHHHHHHHhh
Q 043610           78 PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYS----VLFLQGGATTQFAAVPLN  153 (430)
Q Consensus        78 p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~----vv~~~~gaT~a~~~~~~s  153 (430)
                      .+.+++.+.+.|.+.+..   + .   .....+|...++..++.++|++++|.|+.+.    -.+ |+|+|+|+...+.+
T Consensus        63 ~t~~~~~~~~l~~~~~~~---N-~---~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~-t~GgSeA~~~a~~a  134 (450)
T d1pmma_          63 QTWDDENVHKLMDLSINK---N-W---IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN-TIGSSEACMLGGMA  134 (450)
T ss_dssp             CCCCCHHHHHHHHHTTTC---B-T---TCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEE-ESSHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHhc---C-C---CCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCee-eCchHHHHHHHHHH
Confidence            356778888888876632   1 1   0112357788889999999999999975211    244 57889999876654


Q ss_pred             c-----------CCCCCc-EEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          154 L-----------CTPNDP-VDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       154 l-----------~~~gd~-vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      .           -.+.+. +++....+++  |.+.++..| +++.|+..+.  .+ ..|+++|+  ++++|.+|+.++.+
T Consensus       135 ar~~~~~~~~~~g~~~~~~~~~~~~~H~s--~~Kaa~~~gi~~~~v~~~~~--~~-~~d~~~L~~~i~~~t~~Vv~t~gt  209 (450)
T d1pmma_         135 MKWRWRKRMEAAGKPTDKPNLVCGPVQIC--WHKFARYWDVELREIPMRPG--QL-FMDPKRMIEACDENTIGVVPTFGV  209 (450)
T ss_dssp             HHHHHHHHHHHHTCCCSCCEEEESSCCHH--HHHHHHHTTCEEEECCCBTT--BC-SCCHHHHHHHCCTTEEEEECBBSC
T ss_pred             HHHHHHHHhhhcCCCCCCceEEecccHHH--HHHHHHHcCCCceEeeecCC--CC-cCcHHHHHHHhhhCceEEEeeeee
Confidence            2           122333 4444344443  556677778 8888877542  23 57888887  89999999999999


Q ss_pred             CCccccCC--CCccc-------cCCCcEEEEeccCcCCCCccc---------cccccEEEeCCCcccc-CCccEEEEEcH
Q 043610          219 TIHGVEFK--EYPSA-------KNSTGILVADMSSNFCSKPVD---------VTRFGVIYAGAQKNVG-PSGVTIVIVRK  279 (430)
Q Consensus       219 t~tG~~~p--ei~~~-------~~~g~~lvvD~a~s~G~~~id---------l~~~d~~~~s~~K~~g-p~G~g~l~v~~  279 (430)
                      |.||.+.|  +|.++       +++|++++|||+++.+..+++         +...|.+.+++|||++ |.|+|++++++
T Consensus       210 t~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~~aDSi~~s~HK~~~~p~g~g~l~~r~  289 (450)
T d1pmma_         210 TYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRD  289 (450)
T ss_dssp             TTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESS
T ss_pred             ccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhcccceeEeecChhhccCCCCCeeEEEecC
Confidence            99999999  45442       478999999999987766543         2345789999999995 99999999986


Q ss_pred             HHH-hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC
Q 043610          280 DLL-GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV  358 (430)
Q Consensus       280 ~~~-~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~  358 (430)
                      +.. .......+.|+.+.  .......++.+...+.++..++..+.. .|++++.++..++++++.+.|++..+++++..
T Consensus       290 ~~~~~~~~~~~~~yl~~~--~~~~~~~~sr~~~~~~~~~~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~~~el~~~  366 (450)
T d1pmma_         290 EEALPQELVFNVDYLGGQ--IGTFAINFSRPAGQVIAQYYEFLRLGR-EGYTKVQNASYQVAAYLADEIAKLGPYEFICT  366 (450)
T ss_dssp             GGGSCGGGCEEEEETTEE--EEECCSCCSCBSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred             hhhhhhhcccccCcCCCC--cCCCcccCccchHHHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeC
Confidence            542 22111122233221  112233356666666666777776664 48999999999999999999998777888742


Q ss_pred             -CCCCCccceEEEEcCCC---chhH-HHHHHHHHcCCeec----CCC-CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          359 -EKSVRSFMNVPFTLEKS---DLEA-EFVKEAAKEKMVQL----KGH-RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       359 -~~~~rs~~iv~f~~~~~---~~~~-~~~~~L~~~Gi~~~----~g~-~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       ++..+. .+|+|++.+.   +.+. ++.++|.++|+.+.    +.. .....+|+++...+|++++|+|++.|++.++
T Consensus       367 ~~p~~~l-~~V~Fr~~~~~~~~~~~~~l~~~L~~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~d~lv~dl~~~v~  444 (450)
T d1pmma_         367 GRPDEGI-PAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK  444 (450)
T ss_dssp             CCTTTBS-SEEEEEECTTCCCSSCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCce-EEEEEecCCcccCCCCHHHHHHHHHHcCCeeeccCcCCCcCCcEEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence             333344 4789998642   2344 68899999997642    211 1233699999999999999999999998765

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=4.7e-23  Score=203.24  Aligned_cols=330  Identities=12%  Similarity=0.087  Sum_probs=220.9

Q ss_pred             ccCCCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Q 043610           64 QSGQEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFL  139 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~  139 (430)
                      +...+++++.++.|-  .++|+.|++++.+.+.+    +...|....   ...++.+.+.+.+++..|.  +++ +|++ 
T Consensus        26 ~~~~G~~vi~l~~g~p~~~~p~~i~~a~~~~~~~----~~~~Y~~~~---G~~~lR~~ia~~~~~~~~~~~~~~-~i~i-   96 (382)
T d1b5pa_          26 LRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ----GKTKYAPPA---GIPELREALAEKFRRENGLSVTPE-ETIV-   96 (382)
T ss_dssp             HHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHT----TCCSCCCTT---CCHHHHHHHHHHHHHTTCCCCCGG-GEEE-
T ss_pred             HHhCCCCeEECCCCCCCCCCCHHHHHHHHHHHhc----CCcCCCCCC---CCHHHHHHHHhhhhhhcccccccc-ccee-
Confidence            444566788888876  36789999999988764    111121111   1233344555555555554  454 6776 


Q ss_pred             eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEee
Q 043610          140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICA  216 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~  216 (430)
                      ++|+++|+..++..++++||.|++..+.+.++.  ..++..| ++..++..+.  .+..+|+++++  ++++++++++++
T Consensus        97 t~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~~~~~~~~i~~~~  172 (382)
T d1b5pa_          97 TVGGSQALFNLFQAILDPGDEVIVLSPYWVSYP--EMVRFAGGVVVEVETLPE--EGFVPDPERVRRAITPRTKALVVNS  172 (382)
T ss_dssp             ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHTTCEEEEEECCGG--GTTCCCHHHHHTTCCTTEEEEEEES
T ss_pred             cCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHH--HHHHHhcCeEEEEecccc--cccCCCHHHHHHhCCCCCeEEEECC
Confidence            578999999999999999999998888776653  3556677 7777776543  33457888887  688999999999


Q ss_pred             cCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---CCccc-cccc---cEEEeCCCccccCCc--cEEEEEcHHH
Q 043610          217 NETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---SKPVD-VTRF---GVIYAGAQKNVGPSG--VTIVIVRKDL  281 (430)
Q Consensus       217 ~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~~id-l~~~---d~~~~s~~K~~gp~G--~g~l~v~~~~  281 (430)
                      ++||||.+++  +   |.++ +++|++++.|++++.-   ..+.. ....   -+++.|++|.+|.+|  +|+++.++++
T Consensus       173 P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR~G~~~~~~~~  252 (382)
T d1b5pa_         173 PNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV  252 (382)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHH
T ss_pred             CCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHcCCCCEEEEecchhhccCcHhheEEEEECHHH
Confidence            9999999999  3   4443 5899999999988632   22211 1111   278899999999888  8999999988


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY-LLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~-l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      ++.+..       ..   .  ....+++...+.++..++.. .....-++..++.+++.++.+.+.+.+ .|+....  +
T Consensus       253 i~~~~~-------~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~--p  317 (382)
T d1b5pa_         253 IKAMAS-------VS---R--QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTA-LGLKAVR--P  317 (382)
T ss_dssp             HHHHHH-------HH---H--TTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCCBCC--C
T ss_pred             HHHHHH-------HH---H--hcccCcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhh-cCCeEec--C
Confidence            765321       00   0  11134455555544444431 111113456677778888888888886 6776542  2


Q ss_pred             CCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          361 SVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                        .+..-+.+.+++...+. ++.+.|.++||.+.+|..  ..+++||+++.  ++|++++.++.|+++
T Consensus       318 --~gg~~~~~~~~~~~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~~--~~e~l~~al~rl~~~  381 (382)
T d1b5pa_         318 --SGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYAT--SEENLRKALERFARV  381 (382)
T ss_dssp             --SBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECCS--CHHHHHHHHHHGGGG
T ss_pred             --CceEEEeEeCCCCCCCHHHHHHHHHHCCEEEEeCcccCCCCeEEEEEcC--CHHHHHHHHHHHHHh
Confidence              12223445665433334 688889999999988753  35689999963  788899988888765

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=4.1e-23  Score=202.46  Aligned_cols=317  Identities=13%  Similarity=0.068  Sum_probs=220.8

Q ss_pred             CceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           70 RVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        70 ~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+++++.|-  .++|+.+++++.+.+.+.  .+++   ... +      ..++|+.++++++++++ +|+++ +|+++++
T Consensus        26 ~~I~ls~g~p~~~~p~~i~~al~~~l~~~--~~Y~---~~~-G------~~elr~aiA~~~~~~~~-~Iiit-~G~~~al   91 (368)
T d1v2da_          26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQ--DQYA---PPA-G------LPALREALAEEFAVEPE-SVVVT-SGATEAL   91 (368)
T ss_dssp             TCEECCCCSCSSCCCHHHHHHHHHHTTTS--CSCC---CTT-C------CHHHHHHHHHHHTSCGG-GEEEE-SSHHHHH
T ss_pred             CCEEecCCCCCCCCCHHHHHHHHHHhhcc--cCCC---CCc-C------CHHHHHHHHhhcccCCc-ceeec-cchHHHH
Confidence            467777664  367899999999887532  1111   100 1      22678889999999886 78775 7899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCcccc
Q 043610          148 AAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVE  224 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~  224 (430)
                      ..++..++.+||.|++..+++....  ..++..| +++.++..... .+..+|.++++  ++++++++++++++||||..
T Consensus        92 ~~~~~~l~~~~d~v~~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~  168 (368)
T d1v2da_          92 YVLLQSLVGPGDEVVVLEPFFDVYL--PDAFLAGAKARLVRLDLTP-EGFRLDLSALEKALTPRTRALLLNTPMNPTGLV  168 (368)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEEET-TEEECCHHHHHTTCCTTEEEEEEESSCTTTCCC
T ss_pred             HHHhhccccccccccccCCcchhhh--hHHHhcCCccceecccccc-ccccCCHHHHHHhhccCceEEEEcCCCCccccc
Confidence            9999999999999998887765542  3445566 66666553221 12247888877  68899999999999999999


Q ss_pred             CC--C---Cccc-cCCCcEEEEeccCcCCCCcccc-------ccccEEEeCCCccccCCc--cEEEEEcHHHHhccCCCC
Q 043610          225 FK--E---YPSA-KNSTGILVADMSSNFCSKPVDV-------TRFGVIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKT  289 (430)
Q Consensus       225 ~p--e---i~~~-~~~g~~lvvD~a~s~G~~~idl-------~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~  289 (430)
                      ++  +   |.++ +++|++++.|+++.........       .+..+++.+.+|.++.+|  +|+++.++++++.+....
T Consensus       169 ~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~~~~~~~~~  248 (368)
T d1v2da_         169 FGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMR  248 (368)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeecccccccccccccccccccccccchhhhhh
Confidence            99  3   4454 6899999999988755433221       112367788888888667  899988888776532100


Q ss_pred             CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEE
Q 043610          290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP  369 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~  369 (430)
                                .  .....++...+.++..+++.......++.++++++++++++.+.|++ .|+++...+    +...+.
T Consensus       249 ----------~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~p~----g~~~~~  311 (368)
T d1v2da_         249 ----------Q--WTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA-MGLRVYVPE----GTYFLM  311 (368)
T ss_dssp             ----------H--HHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-TTCCEECCS----BSSEEE
T ss_pred             ----------h--ccccccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHh-cCcEEecCC----ceeEEE
Confidence                      0  01124455666666777765444445788888899999999999997 788875311    223345


Q ss_pred             EEcCCCchhHHHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          370 FTLEKSDLEAEFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       370 f~~~~~~~~~~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +.+++.  +  ..+.|+++||.+.+|..      ..+++|||++  +++|++++.++.|++++
T Consensus       312 ~~l~~~--~--~~~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~--~~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         312 AELPGW--D--AFRLVEEARVALIPASAFYLEDPPKDLFRFAFC--KTEEELHLALERLGRVV  368 (368)
T ss_dssp             EECTTC--C--HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred             EeCCcc--H--HHHHHHhCCEEEEechhhCCCCCCCCEEEEEec--CCHHHHHHHHHHHHHhC
Confidence            567642  2  33457789999877632      2468999986  47899999999998864

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.90  E-value=1.1e-22  Score=198.57  Aligned_cols=312  Identities=13%  Similarity=0.109  Sum_probs=208.5

Q ss_pred             CCCCceeecCC--CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHH
Q 043610           67 QEDRVFNFAAG--PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGAT  144 (430)
Q Consensus        67 ~~~~~~l~~~g--p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT  144 (430)
                      .+..++.|+.|  |.++|+.+++++.+.+.++..     |    .++..    .++|+.+++++|.+++ +|++ ++|++
T Consensus        20 ~p~~~idls~~~np~~~p~~~~~a~~~~~~~~~~-----Y----p~~~~----~~Lr~aia~~~~v~~~-~I~~-~~g~~   84 (355)
T d1lc5a_          20 SPDQLLDFSANINPLGMPVSVKRALIDNLDCIER-----Y----PDADY----FHLHQALARHHQVPAS-WILA-GNGET   84 (355)
T ss_dssp             CGGGSEECSSCCCTTCCCHHHHHHHHHTGGGGGS-----C----CCTTC----HHHHHHHHHHHTSCGG-GEEE-ESSHH
T ss_pred             ChhheEEccCCCCCCCCCHHHHHHHHHHHHHhcc-----C----CCCCh----HHHHHHHHHHhCCCHH-HEEe-cccHH
Confidence            33457788776  677899999999887654321     1    01111    2688999999999886 6776 47888


Q ss_pred             HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEeecCCCcc
Q 043610          145 TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICANETIHG  222 (430)
Q Consensus       145 ~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~~~t~tG  222 (430)
                      +++..++..+.  ++.+++..+.+..+.  ......+ ++..++...+  ++..++.+..+ +.+++++|++++++||||
T Consensus        85 ~~~~~~~~~~~--~~~~~v~~p~~~~~~--~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~v~l~nP~NPtG  158 (355)
T d1lc5a_          85 ESIFTVASGLK--PRRAMIVTPGFAEYG--RALAQSGCEIRRWSLREA--DGWQLTDAILEALTPDLDCLFLCTPNNPTG  158 (355)
T ss_dssp             HHHHHHHHHHC--CSEEEEEESCCTHHH--HHHHHTTCEEEEEECCGG--GTTCCCTTHHHHCCTTCCEEEEESSCTTTC
T ss_pred             HHHHHHHhhhc--cccccccCCccceec--cccccccccceeeeeecc--CCccceeeeeeccccccceeeeecccCccc
Confidence            88887666553  344455555543332  2233344 6777777543  23234422233 788999999999999999


Q ss_pred             ccCC--CCcc---c-cCCCcEEEEeccCc-CCCCc---cc-ccccc--EEEeCCCccccCCc--cEEEEEcHHHH-hccC
Q 043610          223 VEFK--EYPS---A-KNSTGILVADMSSN-FCSKP---VD-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLL-GNAQ  286 (430)
Q Consensus       223 ~~~p--ei~~---~-~~~g~~lvvD~a~s-~G~~~---id-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~-~~~~  286 (430)
                      ...+  ++.+   + +++++++++|+++. +...+   .. ....+  +++.|++|++|.+|  +||++++++.+ +.+.
T Consensus       159 ~~~~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~~~~~~  238 (355)
T d1lc5a_         159 LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMR  238 (355)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHH
T ss_pred             ccchhhhhhhhhhhccccccccccccceeeeeeecccccccccccccceeecccccccccccccccceeccchhhhHHHH
Confidence            9999  4444   3 58999999999875 22221   11 12222  78899999999888  89999876543 3221


Q ss_pred             CCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccc
Q 043610          287 DKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFM  366 (430)
Q Consensus       287 ~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~  366 (430)
                      ..              ..+.+.+.....++..+++..   ..+...++++++.++++++.|.+..|+++.+ .   .++ 
T Consensus       239 ~~--------------~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p-~---~~~-  296 (355)
T d1lc5a_         239 RQ--------------QMPWSVNALAALAGEVALQDS---AWQQATWHWLREEGARFYQALCQLPLLTVYP-G---RAN-  296 (355)
T ss_dssp             HH--------------SCTTCSCHHHHHHHHHGGGCH---HHHHHHHHHHHHHHHHHHHHHHTSTTEEECC-C---SSS-
T ss_pred             hh--------------cCCcccccccccccccccccc---chhHHHHHHHHHHHHHHHHHHhhcCCcEECC-C---CCE-
Confidence            10              112355666777777777532   2356777888888899999999867887654 1   122 


Q ss_pred             eEEEEcCCCchhHHHHHHHHHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          367 NVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       367 iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      -+.+.++.  .+.++.++|.++||.+.++..    ..+++|||++   +++|+++++++|++++
T Consensus       297 f~~~~~~~--~~~~~~~~L~~~gv~vr~~~~f~~~~~~~iRis~~---~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         297 YLLLRCER--EDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVL  355 (355)
T ss_dssp             EEEEEESC--TTCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHC
T ss_pred             EEEEECCC--CHHHHHHHHHHCCcEEEeCccCCCCCCCEEEEEeC---CHHHHHHHHHHHHHhC
Confidence            24456653  223688999999999876532    2468999986   7999999999999874

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.89  E-value=1.1e-22  Score=202.52  Aligned_cols=336  Identities=15%  Similarity=0.122  Sum_probs=211.8

Q ss_pred             CCceeecCCC------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhC--------CCCCc
Q 043610           69 DRVFNFAAGP------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLN--------IPQEY  134 (430)
Q Consensus        69 ~~~~l~~~gp------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g--------~~~~~  134 (430)
                      +.+++++.|-      .++++.+++++.+.+......+++   .....+   ++.+.+.+.+.+.++        .+++ 
T Consensus        30 ~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~---~~~G~~---~LReaia~~~~~~~~~~~~~~~~~~~~-  102 (412)
T d1bw0a_          30 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYF---PTVGSP---EAREAVATWWRNSFVHKEELKSTIVKD-  102 (412)
T ss_dssp             SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCC---CTTCCH---HHHHHHHHHHHHHHCCSTTTGGGCCGG-
T ss_pred             CCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCC---CCcCCH---HHHHHHHHHHHHhcCcccccCCCCCCC-
Confidence            3467776652      346678888888766532222221   111123   333455555555442        3454 


Q ss_pred             EEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccE
Q 043610          135 SVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKY  211 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~l  211 (430)
                      +|+++ +|+++++..++.+++++||+|++.++.+..+.  ..++..| +++.++..+.  .+..+++++++  +.+++++
T Consensus       103 ~I~it-~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~~~~--~~~~~~~~~l~~~~~~~~~~  177 (412)
T d1bw0a_         103 NVVLC-SGGSHGILMAITAICDAGDYALVPQPGFPHYE--TVCKAYGIGMHFYNCRPE--NDWEADLDEIRRLKDDKTKL  177 (412)
T ss_dssp             GEEEE-SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHTTCEEEEEEEEGG--GTTEECHHHHHHHCCTTEEE
T ss_pred             eEEEe-cccccchhhhhhhhhccccceeeeeccchhhh--hhhhccCccccccccccc--cccchhhHHHHhhhhccccc
Confidence            67775 79999999999999999999998888766543  4566778 8888887543  22346677776  6789999


Q ss_pred             EEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC----Cc-------ccccccc--EEEeCCCccccCCc-
Q 043610          212 LHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS----KP-------VDVTRFG--VIYAGAQKNVGPSG-  271 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~----~~-------idl~~~d--~~~~s~~K~~gp~G-  271 (430)
                      +++++++||||.+.+  +   |.++ +++++++++|++++--.    .+       .+++...  +++.|++|.+|.+| 
T Consensus       178 ~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~  257 (412)
T d1bw0a_         178 LIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGW  257 (412)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGG
T ss_pred             cccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCC
Confidence            999999999999999  3   4443 57899999999875211    11       1122222  57788999999888 


Q ss_pred             -cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          272 -VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       272 -~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                       +|++++.+...+...     ........ .... ..++...+..+...+.... +..++.+++++.+.++.+.+.|.+.
T Consensus       258 RvG~~~~~~~~~~~~~-----~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~l~~~  329 (412)
T d1bw0a_         258 RLGWLLYVDPHGNGPS-----FLEGLKRV-GMLV-CGPCTVVQAALGEALLNTP-QEHLDQIVAKIEESAMYLYNHIGEC  329 (412)
T ss_dssp             CCEEEEEECTTCSCHH-----HHHHHHHH-HHHH-TCSCHHHHHHHHHHHHSSC-HHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             Ccccccccchhhcchh-----hhhhhccc-cccc-cCCchhhhhhccccccccc-ccccccccchhHHHHHHHHHHHHHh
Confidence             899988754432100     00000000 0001 1222333333332221100 1135678888899999999999876


Q ss_pred             CCceecCCCCCCCccceEEEEcC-----CCchhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          351 NGFYKCPVEKSVRSFMNVPFTLE-----KSDLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       351 ~G~~~~~~~~~~rs~~iv~f~~~-----~~~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                      .|+....  + . ...-+...++     +...+.+|+++| +++||.+.+|..  ..|++|||+.  .+++++++.++.|
T Consensus       330 ~g~~~~~--p-~-gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~--~~~e~l~eal~Rl  403 (412)
T d1bw0a_         330 IGLAPTM--P-R-GAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT--RPVEVYREAVERI  403 (412)
T ss_dssp             TTEEECC--C-C-BTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHH
T ss_pred             cCceecC--C-C-CceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEc--CCHHHHHHHHHHH
Confidence            7887653  1 1 2222323443     111234788887 456999988753  3568999986  4789999999999


Q ss_pred             HHHHHhhC
Q 043610          423 KDFQAKHA  430 (430)
Q Consensus       423 ~~~~~~~~  430 (430)
                      ++++++|+
T Consensus       404 ~~~l~~~~  411 (412)
T d1bw0a_         404 KAFCQRHA  411 (412)
T ss_dssp             HHHHHHHB
T ss_pred             HHHHHhcC
Confidence            99999985

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3.3e-21  Score=188.17  Aligned_cols=319  Identities=10%  Similarity=0.046  Sum_probs=205.4

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHHHHHHHHHhhcCC
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGATTQFAAVPLNLCT  156 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT~a~~~~~~sl~~  156 (430)
                      .++|+.+++++.+.+.+    +...|.. ..+++   ..+.+.+.+++.+|.+  ++ +|+++ +|+++++..++.++++
T Consensus        11 f~~p~~i~eal~~~~~~----~~~~Y~~-~~g~~---lr~~ia~~~~~~~g~~~~~~-~i~it-~G~~~~l~~~~~~l~~   80 (361)
T d1d2fa_          11 FATAPCIIEALNQRLMH----GVFGYSR-WKNDE---FLAAIAHWFSTQHYTAIDSQ-TVVYG-PSVIYMVSELIRQWSE   80 (361)
T ss_dssp             SCCCHHHHHHHHHHHTT----CCCCCCC-SCCHH---HHHHHHHHHHHHSCCCCCGG-GEEEE-SCHHHHHHHHHHHSSC
T ss_pred             CCCCHHHHHHHHHHHhC----CCCCCCC-CCCHH---HHHHHHHHHHHHhCCCCCcc-eEEEe-CCHHHHHHHHhhhccc
Confidence            57889999999988753    1111211 12333   4456677777777763  44 67764 8999999999999999


Q ss_pred             CCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c-CCCccEEEEeecCCCccccCC--C---
Q 043610          157 PNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANETIHGVEFK--E---  227 (430)
Q Consensus       157 ~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t~tG~~~p--e---  227 (430)
                      |||+|++.++.+..+.  ...+..| .++.++.... +.+..+|+++++  + .++++++++++++||||...+  +   
T Consensus        81 ~gd~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~-~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~~~~  157 (361)
T d1d2fa_          81 TGEGVVIHTPAYDAFY--KAIEGNQRTVMPVALEKQ-ADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI  157 (361)
T ss_dssp             TTCEEEEEESCCHHHH--HHHHHTTCEEEEEECEEC-SSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHH
T ss_pred             cccccccccccccchh--HHHHhhcceEEeeccccc-ccccccccccchhhcccCCceeEEecccccccccccchhhhhh
Confidence            9999999988876653  3455556 6555654322 122357777776  3 678999999999999999999  3   


Q ss_pred             Cccc-cCCCcEEEEeccCcCCC----Cccccccc---c-EEEeCCCccccCCc--cEEEEEcHH-HHhccCCCCCccccc
Q 043610          228 YPSA-KNSTGILVADMSSNFCS----KPVDVTRF---G-VIYAGAQKNVGPSG--VTIVIVRKD-LLGNAQDKTPLMLDY  295 (430)
Q Consensus       228 i~~~-~~~g~~lvvD~a~s~G~----~~idl~~~---d-~~~~s~~K~~gp~G--~g~l~v~~~-~~~~~~~~~p~~~~~  295 (430)
                      |.++ +++|+++++|++++...    .+..+...   + +++.+++|.+|.+|  +|++++... ..+....        
T Consensus       158 i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~--------  229 (361)
T d1d2fa_         158 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLS--------  229 (361)
T ss_dssp             HHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHH--------
T ss_pred             hhhhhhhhheeeeecccccccccccccccccccccccccccccccccccccccccceeeecchhHHHHHHhh--------
Confidence            4443 58999999999876422    12222222   2 78899999998666  788777543 2222100        


Q ss_pred             cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-CCceecCCCCCCCccceEEEEcCC
Q 043610          296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-NGFYKCPVEKSVRSFMNVPFTLEK  374 (430)
Q Consensus       296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~G~~~~~~~~~~rs~~iv~f~~~~  374 (430)
                        .........+++...+.+...+++....  ..++.++.++++++.+.+.+.+. .++.+.+  +  .+...+.+.+++
T Consensus       230 --~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~--p--~gg~~~~~~l~~  301 (361)
T d1d2fa_         230 --ALKGRDGLSSPSVLALTAHIAAYQQGAP--WLDALRIYLKDNLTYIADKMNAAFPELNWQI--P--QSTYLAWLDLRP  301 (361)
T ss_dssp             --HHHTTSCCCSCCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHCSSCCCCC--C--SBCSEEEEECGG
T ss_pred             --hcccccccccchhhhHHHHHHHhhccch--hhhcccccchhhHHHHHHHhhhhcccccccc--c--CceeEEEEEccC
Confidence              0011112245666666655555554321  34566777777777777776653 2444332  1  122334456643


Q ss_pred             CchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          375 SDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       375 ~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .+.+. +|.++|. ++||.+.+|..    ..+++|||+.  .+++++++.++.|++++++
T Consensus       302 ~~~~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis~~--~~~e~l~~al~rl~~~l~~  359 (361)
T d1d2fa_         302 LNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG--CPRSKLEKGVAGLINAIRA  359 (361)
T ss_dssp             GCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHHh
Confidence            23344 7888875 56999987753    2357999986  4788999999999888775

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.89  E-value=4.2e-22  Score=197.38  Aligned_cols=337  Identities=12%  Similarity=0.113  Sum_probs=220.3

Q ss_pred             ccccCCCCCceeecCCC-----CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCc
Q 043610           62 QIQSGQEDRVFNFAAGP-----ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEY  134 (430)
Q Consensus        62 ~~~~~~~~~~~l~~~gp-----~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~  134 (430)
                      .++...+.++++++.|-     .++|+.+++++.+.+.+    +...|....   ...++.+.+.+.+++.+|.+  ++ 
T Consensus        23 ~~l~~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~----~~~~Y~~~~---G~~~LR~aia~~~~~~~g~~~~~~-   94 (395)
T d1xi9a_          23 RELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKE----GHNYYGDSE---GLPELRKAIVEREKRKNGVDITPD-   94 (395)
T ss_dssp             HHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHT----TCCSCCCTT---CCHHHHHHHHHHHHHHHCCCCCGG-
T ss_pred             HHHHHCCCCeEECCCCCCCCCCCCCCHHHHHHHHHHHhc----CCCCCCCCC---CCHHHHHHHHHhhhhccccccccc-
Confidence            33555567789998873     57889999999998854    111121111   12344456667777777764  43 


Q ss_pred             EEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccE
Q 043610          135 SVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKY  211 (430)
Q Consensus       135 ~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~l  211 (430)
                      +|+++ +|+++++.+++..++.+||+|++.++.+..+.  ..++..| +++.++....  .+..+|+++++  +.+++++
T Consensus        95 ~i~i~-~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~--~~~~~~g~~~v~v~~~~~--~~~~~d~~~~~~~~~~~~~~  169 (395)
T d1xi9a_          95 DVRVT-AAVTEALQLIFGALLDPGDEILVPGPSYPPYT--GLVKFYGGKPVEYRTIEE--EDWQPDIDDIRKKITDRTKA  169 (395)
T ss_dssp             GEEEE-SHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHHTTCEEEEEEEEGG--GTSEECHHHHHHHCCTTEEE
T ss_pred             ccccc-cccchhhhhhhhhhcCCCCEEEEcCCccccch--hhhhhcCCEEEEEecccc--ccccchHHHHHHhhcccccE
Confidence            67665 78999999999999999999998888776542  3456667 7777765432  23357888776  7889999


Q ss_pred             EEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC---c---ccccccc--EEEeCCCccccCCc--cEEE
Q 043610          212 LHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK---P---VDVTRFG--VIYAGAQKNVGPSG--VTIV  275 (430)
Q Consensus       212 v~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~---~---idl~~~d--~~~~s~~K~~gp~G--~g~l  275 (430)
                      |++++++||||.+++  +   |.++ ++++++++.|+++.....   .   ..+.+.+  +++.|++|.++.+|  +|++
T Consensus       170 v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRvG~~  249 (395)
T d1xi9a_         170 IAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYM  249 (395)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEE
T ss_pred             EEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCCEEEEeCcchhcccchhhcEee
Confidence            999999999999999  3   4443 589999999998764322   1   1122222  77899999999889  8888


Q ss_pred             EEcH--HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCc
Q 043610          276 IVRK--DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGF  353 (430)
Q Consensus       276 ~v~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~  353 (430)
                      ++..  ..++.+..    ...   ...  .....++.+.+.++..+++.-  +..+++.++++++.++.+.+.|.+..++
T Consensus       250 ~~~~~~~~~~~~~~----~~~---~~~--~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~  318 (395)
T d1xi9a_         250 YFVDPENKLSEVRE----AID---RLA--RIRLCPNTPAQFAAIAGLTGP--MDYLKEYMKKLKERRDYIYKRLNEIPGI  318 (395)
T ss_dssp             EEECTTCTTHHHHH----HHH---HHH--HHTCCSCSHHHHHHHHHHHSC--CHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred             EecCHHHHHHHHHH----HHH---Hhh--cCCCCcCHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            7642  12111100    000   000  011244556677666666522  1236777888899999999999974344


Q ss_pred             eecCCCCCCCccceEEEEcCCC--chhHHHHHHH-HHcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          354 YKCPVEKSVRSFMNVPFTLEKS--DLEAEFVKEA-AKEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       354 ~~~~~~~~~rs~~iv~f~~~~~--~~~~~~~~~L-~~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      .+..  + . +..-+.+.++..  ..+.+++.+| +++||.+.+|..    ..+++||++.  .++|++++.++.|++++
T Consensus       319 ~~~~--p-~-gg~~~~~~l~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~--~~~e~l~eal~rl~~~l  392 (395)
T d1xi9a_         319 STTK--P-Q-GAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEILEEAMDRFEKFM  392 (395)
T ss_dssp             ECCC--C-C-BSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred             eecC--C-C-eeEEEeEECCCCCCCCHHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHH
Confidence            4332  2 1 112233445421  2234677664 567999888753    2567999986  47889999999999987


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       393 ~e  394 (395)
T d1xi9a_         393 KE  394 (395)
T ss_dssp             HH
T ss_pred             hc
Confidence            64

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.88  E-value=2.6e-22  Score=198.72  Aligned_cols=332  Identities=10%  Similarity=0.040  Sum_probs=206.5

Q ss_pred             ccCCCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Q 043610           64 QSGQEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFL  139 (430)
Q Consensus        64 ~~~~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~  139 (430)
                      +...+++++.++.|-  .++|+.|++++.+.+.+- ..|.        .....++.+.+.+.+++.+|.  +++ +|+++
T Consensus        26 ~~~~g~~vi~l~~g~pdf~~p~~v~~al~~~~~~~-~~~Y--------~~g~~~Lr~aia~~~~~~~g~~~~~~-~I~vt   95 (394)
T d1c7na_          26 NPEVGNEVVPLSVADMEFKNPPELIEGLKKYLDET-VLGY--------TGPTEEYKKTVKKWMKDRHQWDIQTD-WIINT   95 (394)
T ss_dssp             CTTCCTTCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSS--------BCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE
T ss_pred             hHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhCC-CcCC--------CCCCHHHHHHHHHHHHHhcCCCCCCc-ceEee
Confidence            334456788888875  478899999999887641 1121        111123445666666666675  444 67765


Q ss_pred             eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc---cCCCccEEEEe
Q 043610          140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHIC  215 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~  215 (430)
                       +|+++++..++..+++|||+|++..+.++.+.  ...+..| +.+.++.... +....+|.+.++   .++++++++++
T Consensus        96 -~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~--~~~~~~g~~~v~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~i~l~  171 (394)
T d1c7na_          96 -AGVVPAVFNAVREFTKPGDGVIIITPVYYPFF--MAIKNQERKIIECELLEK-DGYYTIDFQKLEKLSKDKNNKALLFC  171 (394)
T ss_dssp             -SSHHHHHHHHHHHHCCTTCEEEECSSCCTHHH--HHHHTTTCEEEECCCEEE-TTEEECCHHHHHHHHTCTTEEEEEEE
T ss_pred             -ccchhhhhhhhccccccccccccccCcccchh--hHHhhhhhcccccccccc-cccccchhhhhhhhhccccceEEEec
Confidence             78999999999999999999998777777653  2344455 4444443221 112235555555   36789999999


Q ss_pred             ecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC---Cc-c---c-ccc-cc--EEEeCCCccccCCc--cEEEE
Q 043610          216 ANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---KP-V---D-VTR-FG--VIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       216 ~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~-i---d-l~~-~d--~~~~s~~K~~gp~G--~g~l~  276 (430)
                      +++||||.+++  +   |.++ +++++++++|++++--.   .+ .   . ... .+  +++.|++|.+|.+|  +|+++
T Consensus       172 ~P~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~  251 (394)
T d1c7na_         172 SPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNII  251 (394)
T ss_dssp             SSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEE
T ss_pred             ccccccceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeeccccccccccccccccccc
Confidence            99999999999  4   4443 58999999999875321   11 0   1 111 12  77899999999778  67777


Q ss_pred             EcHH-HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc-CCce
Q 043610          277 VRKD-LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS-NGFY  354 (430)
Q Consensus       277 v~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~-~G~~  354 (430)
                      +.+. +.+.+...    .      .. ......+.....++....+...  ...+++.+++++.++.+.+.++.. .|+.
T Consensus       252 ~~~~~i~~~~~~~----~------~~-~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  318 (394)
T d1c7na_         252 IKNPDIRERFTKS----R------DA-TSGMPFTTLGYKACEICYKECG--KWLDGCIKVIDKNQRIVKDFFEVNHPEIK  318 (394)
T ss_dssp             CCCHHHHHHHHHH----H------HH-TTCCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHCTTSB
T ss_pred             ccChhhhhhhhhh----h------hh-ccccccccccchhhhhhhcchh--hhhcccccccchhhhhhhhhhhcccccee
Confidence            7654 43332110    0      00 0112223333333333333222  135667777777788888877642 3444


Q ss_pred             ecCCCCCCCccceEEEEcCCCchhH-HHHHHHH-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          355 KCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAA-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...  +  .+...+.+.+++.+.+. +|.+.|. ++||.+.+|..    ..+++|||++  .+++++++.++.|++++++
T Consensus       319 ~~~--p--~g~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~--~~~e~i~eal~rl~~~l~~  392 (394)
T d1c7na_         319 APL--I--EGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA--APSSVIQESLERLNKALKD  392 (394)
T ss_dssp             CCC--C--SBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             ecC--C--CceeEEEEECCCCCCCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHHh
Confidence            321  1  12223445666423334 7888875 55999887643    2457999986  3788899999999988765

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=4.4e-21  Score=188.24  Aligned_cols=323  Identities=15%  Similarity=0.127  Sum_probs=217.7

Q ss_pred             CCCCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeC
Q 043610           66 GQEDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQG  141 (430)
Q Consensus        66 ~~~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~  141 (430)
                      ..++++++++.|-  .++|+.+++++.+.+.+    +...|....   ...++.+.+.+.+.+..|.+  ++ ++++ ++
T Consensus        25 ~~G~~vI~l~~G~p~~~~p~~i~~~~~~~~~~----~~~~Y~~~~---G~~~lR~aia~~~~~~~~~~~~~~-~i~~-t~   95 (375)
T d1o4sa_          25 KKGEDVINLTAGEPDFPTPEPVVEEAVRFLQK----GEVKYTDPR---GIYELREGIAKRIGERYKKDISPD-QVVV-TN   95 (375)
T ss_dssp             HTTCCCEECCCSSCSSCCCHHHHHHHHHHHTT----CCCCCCCTT---CCHHHHHHHHHHHHHHHTCCCCGG-GEEE-ES
T ss_pred             HCCCCeEECCCcCCCCCCCHHHHHHHHHHHhc----CCcCCCCCc---CCHHHHHHHHhhhhhccccccccc-cccc-cC
Confidence            3456789999874  35788999999887753    211121211   12344456666777677764  33 5665 47


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecC
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANE  218 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~  218 (430)
                      |+++|+..++.+++++||.|++..+.++.+.  ......+ ....+...+.  .+..++.+.++  ..++++++++++++
T Consensus        96 G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~nP~  171 (375)
T d1o4sa_          96 GAKQALFNAFMALLDPGDEVIVFSPVWVSYI--PQIILAGGTVNVVETFMS--KNFQPSLEEVEGLLVGKTKAVLINSPN  171 (375)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECCGG--GTTCCCHHHHHHTCCTTEEEEEEESSC
T ss_pred             cHHHHHHHHHHHHhCCCCEEEEccCccccch--hhhhcccccccccccccc--ccccchhHHHHHhhccCccEEEEeCCC
Confidence            8999999999999999999999888776643  2344455 6666665442  33356666665  57889999999999


Q ss_pred             CCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc---c---c-ccccc--EEEeCCCccccCCc--cEEEEEcHHH
Q 043610          219 TIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP---V---D-VTRFG--VIYAGAQKNVGPSG--VTIVIVRKDL  281 (430)
Q Consensus       219 t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~---i---d-l~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~  281 (430)
                      ||||...+  +   |.++ ++++++++.|+++......   .   . .+..+  +++.|++|.+|.+|  +|+++.+++.
T Consensus       172 NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R~G~~~~~~~~  251 (375)
T d1o4sa_         172 NPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKV  251 (375)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHH
T ss_pred             CCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCccccccccccccc
Confidence            99999999  3   4443 5899999999987654331   1   1 12223  78899999999878  9999999988


Q ss_pred             HhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          282 LGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       282 ~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      ++.+.....          .  .....+........   ...  +.......+++.+.++.+.+.|++ .|+++..  + 
T Consensus       252 ~~~~~~~~~----------~--~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~r~~~~~~~l~~-~g~~~~~--p-  310 (375)
T d1o4sa_         252 ATAVSKIQS----------H--TTSCINTVAQYAAL---KAL--EVDNSYMVQTFKERKNFVVERLKK-MGVKFVE--P-  310 (375)
T ss_dssp             HHHHHHHHH----------H--HTCSCCHHHHHHHH---HHT--TCCCHHHHHHHHHHHHHHHHHHHH-TTCCCCC--C-
T ss_pred             hhhhhhhhc----------c--ccccccccchhhhh---hhc--ccchhhhHHHHHHHHHHHHHHHHh-cCceEec--C-
Confidence            775321000          0  00122222222222   222  234577788889999999999986 7887653  2 


Q ss_pred             CCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       .+..-+.+.++.  .+.+++.+| +++||.+.+|..  ..|+|||++.  .+++++++.++.|+++++
T Consensus       311 -~gg~f~~~~~~~--~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~--~~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         311 -EGAFYLFFKVRG--DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIERLTEALDRIEDFLN  374 (375)
T ss_dssp             -SBSSEEEEECSS--CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred             -CccEEEEEECCC--CHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEc--CCHHHHHHHHHHHHHHhc
Confidence             122335566764  244677665 567999988753  3678999986  488999999999999875

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=2.6e-21  Score=188.61  Aligned_cols=273  Identities=10%  Similarity=0.119  Sum_probs=181.9

Q ss_pred             HHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEE-eCChhHHHHHHHHHHhC-CceEEecCCCCcCCC
Q 043610          119 KAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYI-VTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTK  196 (430)
Q Consensus       119 ~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~-~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~  196 (430)
                      ++|+.+++++|++++ +|+++ +|+++++..++.++++|||.++++ .+.+..+.  ..++..| +++.++..+  ++  
T Consensus        60 ~Lr~~ia~~~gv~pe-~I~it-~Gs~eai~~~~~~~~~pgd~~Vl~~~P~y~~~~--~~~~~~g~~v~~~~~~~--~~--  131 (354)
T d1fg7a_          60 AVIENYAQYAGVKPE-QVLVS-RGADEGIELLIRAFCEPGKDAILYCPPTYGMYS--VSAETIGVECRTVPTLD--NW--  131 (354)
T ss_dssp             HHHHHHHHHHTSCGG-GEEEE-SHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHH--HHHHHHTCEEEECCCCT--TS--
T ss_pred             HHHHHHHHHhCCChH-Heeec-cCchHHHHHHHHHhhccccccccccccccccch--hhhhccCceeecccccc--cc--
Confidence            788999999999987 77775 899999999999999999975544 44444432  3455567 666665533  23  


Q ss_pred             CCCccccc-cCCCccEEEEeecCCCccccCC--CCcc---ccCCCcEEEEecc-CcCCCCc---ccccccc--EEEeCCC
Q 043610          197 IPNFDALE-QNPDAKYLHICANETIHGVEFK--EYPS---AKNSTGILVADMS-SNFCSKP---VDVTRFG--VIYAGAQ  264 (430)
Q Consensus       197 ~~d~~~l~-i~~~~~lv~i~~~~t~tG~~~p--ei~~---~~~~g~~lvvD~a-~s~G~~~---idl~~~d--~~~~s~~  264 (430)
                      .+|+++++ ..+++++|++++++||||.+.+  ++..   +.+++.++++|.+ +.+....   ......+  +++.|++
T Consensus       132 ~~d~~~l~~~~~~~~~v~~~~pnNPtG~~~~~~~~~~~~~~~~~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~~S~S  211 (354)
T d1fg7a_         132 QLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLS  211 (354)
T ss_dssp             CCCHHHHHTSCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESS
T ss_pred             ccchhhhhhcccccceeeccCCCccceeEeeecccccccccccccccccccccchhhccccccchhhcccccceEEeCCc
Confidence            47888877 4468999999999999999999  3333   2356777777765 4443211   1112222  6789999


Q ss_pred             ccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          265 KNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       265 K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      |.+|.+|  +|+++.+++.++.+.+..              .+...+.+.+..+..++..-. ........+++.+.+++
T Consensus       212 K~~~laGlRiGy~i~~~~~i~~l~~~~--------------~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~r~~  276 (354)
T d1fg7a_         212 KAFALAGLRCGFTLANEEVINLLMKVI--------------APYPLSTPVADIAAQALSPQG-IVAMRERVAQIIAEREY  276 (354)
T ss_dssp             STTCCGGGCCEEEEECHHHHHHHHHHS--------------CSSCSCHHHHHHHHHHTSHHH-HHHHHHHHHHHHHHHHH
T ss_pred             cccCCCccccccccccchhhhhhhhhc--------------CccchhhHHHHHHHHHHhhhc-cccccccchhhhhHHHH
Confidence            9999888  999999999887643211              012334444444444432211 11234555667778888


Q ss_pred             HHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC---CCCeeEEeecCCCCHHHHHHHH
Q 043610          343 LYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR---SVGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       343 l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~---~~g~iRis~~~~~t~edv~~ll  419 (430)
                      +.+.+.+..++....  ++ .++ -+.+.+++   ..++.+.|.++||.+.++..   ..+++|||++   +++|+++++
T Consensus       277 l~~~l~~~~~~~~~~--p~-~~~-f~~~~~~~---~~~~~~~L~~~gIlvr~~~~~~~~~~~lRisig---t~ee~~~~l  346 (354)
T d1fg7a_         277 LIAALKEIPCVEQVF--DS-ETN-YILARFKA---SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREESQRVI  346 (354)
T ss_dssp             HHHHHHHSTTEEEEC--CC-SSS-EEEEEETT---HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHH
T ss_pred             HHHHHHhCCCcceeC--CC-Cce-EEEEeCCC---HHHHHHHHHHCCcEEecCCCCCCCCCEEEEEeC---CHHHHHHHH
Confidence            899998755543321  11 122 23355653   34788999999999865432   2568999986   799999999


Q ss_pred             HHHHH
Q 043610          420 AFMKD  424 (430)
Q Consensus       420 ~~L~~  424 (430)
                      ++||.
T Consensus       347 ~aLka  351 (354)
T d1fg7a_         347 DALRA  351 (354)
T ss_dssp             HHHHT
T ss_pred             HHHhh
Confidence            99974

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=7.4e-21  Score=187.49  Aligned_cols=323  Identities=11%  Similarity=0.078  Sum_probs=219.9

Q ss_pred             CCCCCceeecCCC---CCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeC
Q 043610           66 GQEDRVFNFAAGP---ANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQG  141 (430)
Q Consensus        66 ~~~~~~~l~~~gp---~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~  141 (430)
                      ...++.++|+..-   -...|.|++++.+.+.+|. +.+.|....+     ..++++++++.|++++|.+   ..+++ +
T Consensus        35 ~~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g-----~~~~~~~lE~~LA~~~g~e---~al~~-~  105 (383)
T d1bs0a_          35 ADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSG-----YSVVHQALEEELAEWLGYS---RALLF-I  105 (383)
T ss_dssp             ETTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTC-----CCHHHHHHHHHHHHHHTCS---EEEEE-S
T ss_pred             ECCeEEEEEEcccccccCCCHHHHHHHHHHHHHhCCCCCccccccC-----cchHHHHHHHHHHHhcCCC---ceEEe-c
Confidence            3445566676532   1347799999999998763 2333322111     1356678999999999986   45665 6


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc-----cCCCccEEEEee
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE-----QNPDAKYLHICA  216 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~-----i~~~~~lv~i~~  216 (430)
                      +++.++..++.++.+++|.+++-...+.+.  . .+.+.....++...    +   .|.++++     ..++.++|++..
T Consensus       106 SG~~an~~~i~al~~~~d~v~~d~~~h~si--~-~g~~~~~~~~~~~~----h---nd~~~le~~l~~~~~~~~~vv~e~  175 (383)
T d1bs0a_         106 SGFAANQAVIAAMMAKEDRIAADRLSHASL--L-EAASLSPSQLRRFA----H---NDVTHLARLLASPCPGQQMVVTEG  175 (383)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHH--H-HHHHTSSSEEEEEC----T---TCHHHHHHHHHSCCSSCEEEEEES
T ss_pred             ccchhhHHHHHhhcCCCceEEeeccccHHH--h-hccccCCCcceEec----c---hHHHHHHHHhcccCCCceEEEecC
Confidence            899999999999999999887544444442  2 23333322222221    1   3445554     345678899999


Q ss_pred             cCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCccccc------c--ccEEEeCCCccccCCccEEEEEcHHHHhcc
Q 043610          217 NETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPVDVT------R--FGVIYAGAQKNVGPSGVTIVIVRKDLLGNA  285 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~idl~------~--~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~  285 (430)
                      +.+.+|.+.|  +|.++ +++|++++||++|++|...-+-.      .  .++++.++.|.+|..| |++..+.+.++.+
T Consensus       176 v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~~~~~~t~~ka~g~~G-g~v~~~~~~~~~l  254 (383)
T d1bs0a_         176 VFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG-AAVLCSSTVADYL  254 (383)
T ss_dssp             BCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC-EEEEECHHHHHHH
T ss_pred             CCCCCCcccchhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCCccccccccccccccccc-cccccchhHHHHH
Confidence            9999999999  78887 68999999999999997653311      1  1478889999999777 8888888877654


Q ss_pred             CCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCcc
Q 043610          286 QDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSF  365 (430)
Q Consensus       286 ~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~  365 (430)
                      ....+.+.          .....+.+...++.++++.+.. ...+...++..++..++++.|.+ .|+.+.+    ..++
T Consensus       255 ~~~~~~~~----------~s~~~~p~~~aa~~~a~~~~~~-~~~~~~~~~l~~~~~~~~~~l~~-~g~~~~~----~~s~  318 (383)
T d1bs0a_         255 LQFARHLI----------YSTSMPPAQAQALRASLAVIRS-DEGDARREKLAALITRFRAGVQD-LPFTLAD----SCSA  318 (383)
T ss_dssp             HHHCHHHH----------SSBCCCHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHTT-SSCEECS----CCSS
T ss_pred             Hhhchhhh----------hcccccchHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHh-cCCccCC----CCCC
Confidence            32111111          1123444556677778886653 34677888999999999999986 7887653    1243


Q ss_pred             ceEEEEcCCCchhHHHHHHHHHcCCeecC---CCCC--CCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          366 MNVPFTLEKSDLEAEFVKEAAKEKMVQLK---GHRS--VGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       366 ~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~---g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                       ++++.+.+.....++.++|.++||.+.+   ....  ...+||+++.++|+||||+++++|+..
T Consensus       319 -Ii~v~~g~~~~a~~~~~~L~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         319 -IQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             -BCCEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             -EEEEEECCHHHHHHHHHHHHHCCceEEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence             4555555422222688999999998643   1112  236999999999999999999999864

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.87  E-value=1.9e-20  Score=186.65  Aligned_cols=333  Identities=13%  Similarity=0.041  Sum_probs=216.7

Q ss_pred             CceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcHHH
Q 043610           70 RVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGATT  145 (430)
Q Consensus        70 ~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~gaT~  145 (430)
                      ++++++.|-.  ++|+.+++++.+.+.+... +...|....   ...++.+.+.+.+++.+|.+  +.++|++ ++|+++
T Consensus        27 ~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~-~~~~Y~~~~---G~~~lReaiA~~~~~~~g~~~~p~~~I~i-t~G~~~  101 (418)
T d2r5ea1          27 KPLNLGQGFPDYHAPKYALNALAAAANSPDP-LANQYTRGF---GHPRLVQALSKLYSQLVDRTINPMTEVLV-TVGAYE  101 (418)
T ss_dssp             CCEECSSSCCSSCCCHHHHHHHHHHHTCSCG-GGGSCCCTT---CCHHHHHHHHHHHHHHHTSCCCTTTSEEE-ESHHHH
T ss_pred             CCEEccCCCCCCCCCHHHHHHHHHHHhCCCc-cCcCCCCCC---CCHHHHHHHHHHHHHHhCCCCCccceEEE-cCCCch
Confidence            5788888752  4678999999888753110 000111111   12344456667777777764  2236776 589999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCC------CCCCccccc--cCCCccEEEEee
Q 043610          146 QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYT------KIPNFDALE--QNPDAKYLHICA  216 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g------~~~d~~~l~--i~~~~~lv~i~~  216 (430)
                      |+..++..+++|||.|++..+++..+.  ..+...| +++.++...+....      ..++.+++.  ..++++++++++
T Consensus       102 al~~~~~~l~~~gd~vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  179 (418)
T d2r5ea1         102 ALYATIQGHVDEGDEVIIIEPFFDCYE--PMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT  179 (418)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCCTTEEEEEEES
T ss_pred             hhhhhhhhccccccceeccccccchhh--HHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhhccccceecCC
Confidence            999999999999999999888877653  3455566 77777764321110      122333343  467899999999


Q ss_pred             cCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc----c---ccccc-c--EEEeCCCccccCCc--cEEEEEc
Q 043610          217 NETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP----V---DVTRF-G--VIYAGAQKNVGPSG--VTIVIVR  278 (430)
Q Consensus       217 ~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~----i---dl~~~-d--~~~~s~~K~~gp~G--~g~l~v~  278 (430)
                      ++||||.+++  +   |.++ +++|++++.|+++......    .   .+.+. +  +++.|++|.+|.+|  +|+++.+
T Consensus       180 p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~  259 (418)
T d2r5ea1         180 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGP  259 (418)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEESC
T ss_pred             cCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceeeeeecCCccccCCCccccccccc
Confidence            9999999999  3   4444 5889999999998754321    1   12222 2  67899999999778  9999999


Q ss_pred             HHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHHHHHHHHccCCc
Q 043610          279 KDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE-----LGGLNEVEKMNRKKAELLYNVIDGSNGF  353 (430)
Q Consensus       279 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~-----~~g~~~v~~~~~~l~~~l~~~l~~~~G~  353 (430)
                      +++++.+...           . .......+.+.+.++...++....     +..++++++++++.++.+++.|.+ .|+
T Consensus       260 ~~~i~~~~~~-----------~-~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~g~  326 (418)
T d2r5ea1         260 EALLKNLQMV-----------H-QNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE-VGM  326 (418)
T ss_dssp             HHHHHHHHHH-----------H-TTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred             chhhhhhhhc-----------c-cccccccccchhhhccccccccccccccchhhHHHHHHHHHHhhhhHHhhHhh-cCC
Confidence            9987764210           0 011123444555555544432110     113577888999999999999997 687


Q ss_pred             eecCCCCCCCccceEEEEcCC------------CchhHHHHHHHH-HcCCeecCCCCC---------CCeeEEeecCCCC
Q 043610          354 YKCPVEKSVRSFMNVPFTLEK------------SDLEAEFVKEAA-KEKMVQLKGHRS---------VGGMRASIYNAMP  411 (430)
Q Consensus       354 ~~~~~~~~~rs~~iv~f~~~~------------~~~~~~~~~~L~-~~Gi~~~~g~~~---------~g~iRis~~~~~t  411 (430)
                      .+..  |  .+..-+.+.++.            ...+.+|+++|. ++||.+.+|...         .++||||+..  +
T Consensus       327 ~~~~--P--~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~~--~  400 (418)
T d2r5ea1         327 NPTV--P--QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK--K  400 (418)
T ss_dssp             EEEE--C--SBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECCS--C
T ss_pred             cccC--C--CceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEEEEEecC--C
Confidence            7643  1  122222233321            112337888764 569999887421         3579999964  8


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 043610          412 LAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       412 ~edv~~ll~~L~~~~~~  428 (430)
                      +|++++.++.|++++.+
T Consensus       401 ~e~l~~a~~rl~~~lg~  417 (418)
T d2r5ea1         401 DENLQKAAEILRKWKGS  417 (418)
T ss_dssp             HHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcc
Confidence            89999999999998864

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=8.3e-21  Score=183.68  Aligned_cols=305  Identities=12%  Similarity=0.064  Sum_probs=204.6

Q ss_pred             ccCCCCCceee--cCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC---CCCcEEEE
Q 043610           64 QSGQEDRVFNF--AAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI---PQEYSVLF  138 (430)
Q Consensus        64 ~~~~~~~~~l~--~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~---~~~~~vv~  138 (430)
                      +...+++++.+  +..|.++|+.+++++.+.+..    +.    . ++.+..  -..++|+.++++++.   +++ +|++
T Consensus        14 ~~~~~~d~~~l~~~enp~~~p~~i~~~~~~~~~~----~~----~-~~yp~~--g~~~Lr~aia~~~~~~~v~~d-~I~i   81 (334)
T d2f8ja1          14 YETEKRDKTYLALNENPFPFPEDLVDEVFRRLNS----DA----L-RIYYDS--PDEELIEKILSYLDTDFLSKN-NVSV   81 (334)
T ss_dssp             CCCCCCCSEECSSCCCSSCCCHHHHHHHHHHCCT----TG----G-GSCCCS--SCHHHHHHHHHHHTCSSCCGG-GEEE
T ss_pred             ccccCCCceEEECCCCCCCCCHHHHHHHHHHhhc----ch----h-cCCCCC--CcHHHHHHHHHHhcccCCCcc-eEEe
Confidence            44455555544  446678899999998887642    11    1 111110  023577778887764   454 7777


Q ss_pred             EeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-cCCCccEEEEee
Q 043610          139 LQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-QNPDAKYLHICA  216 (430)
Q Consensus       139 ~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-i~~~~~lv~i~~  216 (430)
                      + +|+++++.+++.    +||+|++..+++.++.  ..++..| +++.++..++   ...     .+ ..++++++++++
T Consensus        82 t-~G~~~~l~~l~~----~~d~v~i~~P~y~~~~--~~~~~~g~~~v~v~~~~~---~~~-----~~~~~~~~~~l~l~n  146 (334)
T d2f8ja1          82 G-NGADEIIYVMML----MFDRSVFFPPTYSCYR--IFAKAVGAKFLEVPLTKD---LRI-----PEVNVGEGDVVFIPN  146 (334)
T ss_dssp             E-EHHHHHHHHHHH----HSSEEEECSSCCHHHH--HHHHHHTCCEEECCCCTT---SCC-----CCCCCCTTEEEEEES
T ss_pred             c-CcchhHHHHHhh----hccccccccccccccc--cchhccCCcccccccccc---ccc-----cccccccceEEEecc
Confidence            5 688899887654    4689988777766543  3456678 8888876532   111     12 357889999999


Q ss_pred             cCCCccccCC--CCccccCCCcEEEEeccCcCCCC---cccccccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCC
Q 043610          217 NETIHGVEFK--EYPSAKNSTGILVADMSSNFCSK---PVDVTRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQD  287 (430)
Q Consensus       217 ~~t~tG~~~p--ei~~~~~~g~~lvvD~a~s~G~~---~idl~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~  287 (430)
                      ++||||.+++  ++.+++++++++++|..+.....   .......+  +++.|++|.+|.+|  +|+++.++++++.+..
T Consensus       147 P~NPtG~~~s~~~l~~~~~~~~~ii~Dd~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~i~~l~~  226 (334)
T d2f8ja1         147 PNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNR  226 (334)
T ss_dssp             SCTTTCCCCCHHHHHHHHTTTCEEEEECTTGGGTCCCCGGGGGTCSSEEEEEESTTTSSCTTTCEEEEEECHHHHHHHHH
T ss_pred             cccccceeecHHHhhccccceeEEeecccchhhcccccccccccCceEEEEecCccccchhhhhhhhcccchHHHHHHHH
Confidence            9999999999  67667678999999987543221   11112223  78899999999778  9999999998876432


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..              .....+...+.++...++..   ..++...+++++.++++.+.|++ .|+++.+  +  .++ -
T Consensus       227 ~~--------------~~~~~s~~~~~~a~~~l~~~---~~~~~~~~~~~~~r~~l~~~L~~-~g~~~~~--~--~g~-f  283 (334)
T d2f8ja1         227 VR--------------LPFNVSYVSQMFAKVALDHR---EIFEERTKFIVEERERMKSALRE-MGYRITD--S--RGN-F  283 (334)
T ss_dssp             HS--------------CTTCSCHHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHH-HTCEECC--C--CSS-E
T ss_pred             hh--------------cccccchhhhhhcccccccc---cchhhHHHHHHHHHHHHHHHHHH-CCCeECC--C--Cce-E
Confidence            10              11234555566555566532   24677788899999999999997 6888764  1  122 2


Q ss_pred             EEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          368 VPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       368 v~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +.+.++. ....++.+.|.++||.+.+   ..++||||++   +.+|+++++++|+++
T Consensus       284 ~~~~~~~-~~~~~~~~~L~~~GI~vr~---~~~~vRis~g---~~ee~~~l~~~l~~f  334 (334)
T d2f8ja1         284 VFVFMEK-EEKERLLEHLRTKNVAVRS---FREGVRITIG---KREENDMILRELEVF  334 (334)
T ss_dssp             EEEECCH-HHHHHHHHHHHHTTEECEE---ETTEEEEECC---CHHHHHHHHHHHHHC
T ss_pred             EEEECCC-CCHHHHHHHHHHCCCEECC---CCCeEEEEcC---CHHHHHHHHHHHhcC
Confidence            3445553 2223788999999998743   2368999987   788999999999874

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=7.8e-21  Score=187.21  Aligned_cols=323  Identities=9%  Similarity=0.042  Sum_probs=220.6

Q ss_pred             CCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEeCcH
Q 043610           68 EDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP--QEYSVLFLQGGA  143 (430)
Q Consensus        68 ~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~--~~~~vv~~~~ga  143 (430)
                      .+++++++.|-.  ++|+.+++++.+.+.+- .++   |....   ...++.+.+.+.+.+.+|.+  ++.+|++ ++|+
T Consensus        25 ~~~~i~l~~G~Pd~~~p~~i~~a~~~~~~~~-~~~---Y~~~~---G~~~LReaia~~~~~~~g~~~~~~~~I~v-t~G~   96 (382)
T d1u08a_          25 QHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQ---YAPMT---GVQALREAIAQKTERLYGYQPDADSDITV-TAGA   96 (382)
T ss_dssp             HTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCS---CCCTT---CCHHHHHHHHHHHHHHHSCCCCTTTTEEE-ESSH
T ss_pred             cCCCEEccCCCCCCCCCHHHHHHHHHHHhcC-CCC---CCCCc---CCHHHHHHHHHHHHHHhCCCCCCCceEEe-ccch
Confidence            346788888873  67889999998887541 112   21211   12344456667777777864  3324665 5899


Q ss_pred             HHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          144 TTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       144 T~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      ++++..+++.++++||.|++..+.++.+.  ......| ...++...+   .+..+|+++++  ..++++++++++++||
T Consensus        97 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~---~~~~~d~~~l~~~~~~~~~~i~l~~P~NP  171 (382)
T d1u08a_          97 TEALYAAITALVRNGDEVICFDPSYDSYA--PAIALSGGIVKRMALQP---PHFRVDWQEFAALLSERTRLVILNTPHNP  171 (382)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECCT---TTCCCCHHHHHHHCCTTEEEEEEESSCTT
T ss_pred             HHHHHHHHhhcccccceEEEecccccchh--hhhhhccccceeccccc---ccccCCHHHHhhhhccCccEEEECCCCcc
Confidence            99999999999999999999888877653  2445566 555555543   33357888877  6789999999999999


Q ss_pred             ccccCC--CCc---cc-cCCCcEEEEeccCcCCCC----cccc---ccc-c--EEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          221 HGVEFK--EYP---SA-KNSTGILVADMSSNFCSK----PVDV---TRF-G--VIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       221 tG~~~p--ei~---~~-~~~g~~lvvD~a~s~G~~----~idl---~~~-d--~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      ||.+++  ++.   ++ .+++++++.|+.+..-..    +...   ... +  +++.|++|.++.+|  +|+++++++++
T Consensus       172 tG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~~~~  251 (382)
T d1u08a_         172 SATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPIS  251 (382)
T ss_dssp             TCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHH
T ss_pred             cccccccccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccchhH
Confidence            999999  333   33 578899999988654322    1111   111 2  78999999999778  99999999887


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+...    .+        ......+.+.+.++..+++.-.  ..++.+++++++.++.+.+.+.. .|+.+.+  +  
T Consensus       252 ~~~~~~----~~--------~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~--p--  312 (382)
T d1u08a_         252 AEIRKV----HQ--------YLTFSVNTPAQLALADMLRAEP--EHYLALPDFYRQKRDILVNALNE-SRLEILP--C--  312 (382)
T ss_dssp             HHHHHH----HH--------HHTSSCCHHHHHHHHHHHHHCT--HHHHTHHHHHHHHHHHHHHHTTS-SSCEECC--C--
T ss_pred             HHHHhh----hc--------ccccccccccccccccccccch--HHHHHHHHHHHhhhhhhhhhhcc-CCcEEec--C--
Confidence            764210    00        0113456677888888886422  24677888899999999999875 7887753  2  


Q ss_pred             CccceEEEEcCCC-chhH-HHHHHH-HHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKS-DLEA-EFVKEA-AKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKD  424 (430)
Q Consensus       363 rs~~iv~f~~~~~-~~~~-~~~~~L-~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~  424 (430)
                      .+..-+.+.++.. ..+. +|+.+| +++||.+.+|..      ..+++|||+..  ++|++++.++.|++
T Consensus       313 ~gg~~~~~~~~~~~~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~--~~e~l~~al~RL~~  381 (382)
T d1u08a_         313 EGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK--KESTLLAAAERLRQ  381 (382)
T ss_dssp             CBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS--CHHHHHHHHHHHTT
T ss_pred             CceEEEEEecCCCCCCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHhC
Confidence            1233455667642 2333 788876 567999988742      13479999863  78889988888765

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.86  E-value=2e-20  Score=184.22  Aligned_cols=323  Identities=11%  Similarity=0.064  Sum_probs=216.7

Q ss_pred             CCCCceeecCCC---CCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           67 QEDRVFNFAAGP---ANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        67 ~~~~~~l~~~gp---~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      ..+.+.+|+..-   -...|.+++++.+.+.+|. +.+.|....++     .+..+++++.|++++|.+.   .+++ ++
T Consensus        43 ~~~~~~~FsSndYLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~-----~~~h~~LE~~lA~~~g~e~---all~-~s  113 (396)
T d2bwna1          43 GKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGT-----TAYHRRLEAEIAGLHQKEA---ALVF-SS  113 (396)
T ss_dssp             CEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCC-----BHHHHHHHHHHHHHTTCSE---EEEE-SC
T ss_pred             CCeEEEEEEcccccCcCCCHHHHHHHHHHHHHhCCCccccccccCC-----chHHHHHHHHHHHHhCCCc---eeee-ec
Confidence            345577776633   1357799999999998763 34444332222     2566789999999999973   5555 68


Q ss_pred             HHHHHHHHHhhcC--CCCCcEEEEeC-ChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cC-CCccEEEEe
Q 043610          143 ATTQFAAVPLNLC--TPNDPVDYIVT-GSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QN-PDAKYLHIC  215 (430)
Q Consensus       143 aT~a~~~~~~sl~--~~gd~vl~~~~-g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~-~~~~lv~i~  215 (430)
                      |..|+..++..+.  +++|.++ .+. .+.+  +.+-++..+ +++.+.-      ...-+++.+.  .. .+.++|++.
T Consensus       114 G~~An~~~i~~l~~~~~~d~i~-~D~~~Has--i~~g~~ls~a~~~~f~H------nd~~~l~~l~~~~~~~~~~~iv~e  184 (396)
T d2bwna1         114 AYNANDATLSTLRVLFPGLIIY-SDSLNHAS--MIEGIKRNAGPKRIFRH------NDVAHLRELIAADDPAAPKLIAFE  184 (396)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEE-EETTCCHH--HHHHHHHSCCCEEEECT------TCHHHHHHHHHHSCTTSCEEEEEE
T ss_pred             chHHHHHHHHHHhcccCCCcee-ehhhhhhc--cchhhhccccCceEeec------chHHHhhhHHhhhcccCceeEEEE
Confidence            9999999888873  5666544 343 2333  223333345 5443322      1111222222  22 345688888


Q ss_pred             ecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------ccc-ccccEEEeCCCccccCCccEEEEEcHHHH
Q 043610          216 ANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VDV-TRFGVIYAGAQKNVGPSGVTIVIVRKDLL  282 (430)
Q Consensus       216 ~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------idl-~~~d~~~~s~~K~~gp~G~g~l~v~~~~~  282 (430)
                      .+.+.+|.+.|  +|.++ +++|++++||++|++|..-         .++ .+.|++++++.|.+|..| ||+..+++.+
T Consensus       185 gvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G-g~v~~~~~~i  263 (396)
T d2bwna1         185 SVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG-GYIAASARMV  263 (396)
T ss_dssp             SBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC-EEEEECHHHH
T ss_pred             eeccCcccccccHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc-cccchhHHHH
Confidence            89999999999  88887 5899999999999999862         222 344899999999999888 8999999988


Q ss_pred             hccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCC
Q 043610          283 GNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSV  362 (430)
Q Consensus       283 ~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~  362 (430)
                      +.+......+.          ....++.+.+.++.++++.+.. ...+..+++...+.+++++.+.+ .|+.+.+    .
T Consensus       264 ~~l~~~~~~~i----------fStalpp~~~aa~~~al~i~~~-~~~~~~r~~l~~~~~~~~~~l~~-~g~~~~~----~  327 (396)
T d2bwna1         264 DAVRSYAPGFI----------FSTSLPPAIAAGAQASIAFLKT-AEGQKLRDAQQMHAKVLKMRLKA-LGMPIID----H  327 (396)
T ss_dssp             HHHHHHCHHHH----------TSBCCCHHHHHHHHHHHHHHTS-HHHHHHHHHHHHHHHHHHHHHHH-HTCCBCC----C
T ss_pred             HHHHhhcchhh----------hcccCcHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHHHHHHHHh-cCCCcCC----C
Confidence            76432111110          1134556667777778887653 22355677788888999999986 6776653    2


Q ss_pred             CccceEEEEcCCCchhHHHHHHH-HHcCCeecC---CCCC--CCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          363 RSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLK---GHRS--VGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       363 rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~---g~~~--~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      .++ |+++.+.+.....++.++| +++||.+..   ....  ...+||+++..+|++|||+++++|+++
T Consensus       328 ~sp-Ivpv~ig~~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         328 GSH-IVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             SSS-CEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             CCC-EEEEEeCCHHHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHh
Confidence            354 6788876422222677774 567998542   1112  347999999999999999999999986

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.85  E-value=1.3e-20  Score=186.55  Aligned_cols=335  Identities=12%  Similarity=0.113  Sum_probs=203.5

Q ss_pred             CCCCceeecCC-CC--CCc-HHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEe
Q 043610           67 QEDRVFNFAAG-PA--NLP-EKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQ  140 (430)
Q Consensus        67 ~~~~~~l~~~g-p~--~~~-~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~  140 (430)
                      ..+++++|+.| |.  ..| +.+.+++.+.+.... .....|....   ...++.+.+.+.+.+.+|.  +++ +|++ +
T Consensus        27 ~~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~-~~~~~Y~~~~---G~~~lR~aia~~l~~~~g~~~~~~-~I~i-t  100 (403)
T d1wsta1          27 ETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHA-DKALQYGTTK---GFTPLRLALARWMEKRYDIPMSKV-EIMT-V  100 (403)
T ss_dssp             TSSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSH-HHHHSCCCSS---CCHHHHHHHHHHHHHHHCCCCTTC-EEEE-E
T ss_pred             CCCCcEECCCCCCCccccCHHHHHHHHHHHHHhCc-ccccCCCCCc---CCHHHHHHHHHHHHHHhCCCCChH-Heee-c
Confidence            34678999887 32  223 355556655543210 0000011111   1233334555555555664  454 7766 5


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccc-c---c--cCCCccEEE
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDA-L---E--QNPDAKYLH  213 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~-l---~--i~~~~~lv~  213 (430)
                      +|+++++..++..++++||+|++.+++++.+.  ..++..| ++..++..+.  ......... .   .  .++.+.+++
T Consensus       101 ~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~--~~~~~~g~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (403)
T d1wsta1         101 AGSQQALDLIGRVFLNPGDPIVVEAPTYLAAI--QAFKYYDPEFISIPLDDK--GMRVDLLEEKLEELRKQGKRVKIVYT  176 (403)
T ss_dssp             SSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHTTCCEEEEEEEETT--EECHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             ccchHHHHHHHHHHhhcCCccccCCCcchhhh--HHHhhccccceeEeeccc--CCccccccccchhhhhcccccccccc
Confidence            89999999999999999999999888877653  3455667 7666766432  110111111 1   1  245667888


Q ss_pred             EeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---CCcc-c---ccccc--EEEeCCCccccCCc--cEEEE
Q 043610          214 ICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---SKPV-D---VTRFG--VIYAGAQKNVGPSG--VTIVI  276 (430)
Q Consensus       214 i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~~~i-d---l~~~d--~~~~s~~K~~gp~G--~g~l~  276 (430)
                      +++++||||..++  +   |.++ +++|++++.|+++..-   ..+. .   +++.+  +++.|++|+++ +|  +|+++
T Consensus       177 ~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~G~RiG~~i  255 (403)
T d1wsta1         177 VSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILA-PGFRIGWVA  255 (403)
T ss_dssp             CCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTC-GGGCCEEEE
T ss_pred             ccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEccccceec-Ccccccccc
Confidence            8999999999999  3   4454 5899999999987522   2221 1   22233  78899999997 46  89999


Q ss_pred             EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc--CCce
Q 043610          277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS--NGFY  354 (430)
Q Consensus       277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~--~G~~  354 (430)
                      .++++++.+...    ..        .....++...+.+....+........++.+++.+.+.++.+.+.|.+.  .|+.
T Consensus       256 ~~~~~i~~~~~~----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~  323 (403)
T d1wsta1         256 AHPHLIRKMEIA----KQ--------SIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEGVE  323 (403)
T ss_dssp             ECHHHHHHHHHH----HH--------HHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred             cchHHHHHHHHH----Hh--------hhccccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhccCCeE
Confidence            999887753210    00        001233444444443333321112245777888888888888888763  2444


Q ss_pred             ecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          355 KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       355 ~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ...  +  .....+.+.+++......+.+.|.++||.+.+|..      ..+++||+++. .+++++++.++.|++++++
T Consensus       324 ~~~--p--~gg~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~~-~~~~~l~~al~rl~~~l~~  398 (403)
T d1wsta1         324 WTK--P--EGGMFVRVTLPEGIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFTY-VPEETIREGVRRLAETIKE  398 (403)
T ss_dssp             ECC--C--SBSSEEEEECCTTCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SCHHHHHHHHHHHHHHHHH
T ss_pred             EeC--C--CceeEEEEECCCCCCHHHHHHHHHHCCEEEEechhhcCCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHH
Confidence            432  2  12234556777522223688889999999877632      24589999863 5788888888888887765


Q ss_pred             h
Q 043610          429 H  429 (430)
Q Consensus       429 ~  429 (430)
                      +
T Consensus       399 ~  399 (403)
T d1wsta1         399 E  399 (403)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=7.4e-20  Score=181.28  Aligned_cols=326  Identities=13%  Similarity=0.105  Sum_probs=220.2

Q ss_pred             CCCCCceeecC----CCCCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           66 GQEDRVFNFAA----GPANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        66 ~~~~~~~l~~~----gp~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      .+.+++++|+.    |- ...|.|++++.+.+++|. +.+.+....     ...+..+++++.|++++|.+   .++++ 
T Consensus        42 ~dG~~~l~f~s~dYLGl-~~hp~v~~a~~~a~~~~g~~~~~sr~~~-----g~~~~~~~lE~~lA~~~g~e---~al~~-  111 (401)
T d1fc4a_          42 ADGSHVINFCANNYLGL-ANHPDLIAAAKAGMDSHGFGMASVRFIC-----GTQDSHKELEQKLAAFLGME---DAILY-  111 (401)
T ss_dssp             TTSCEEEECCCSCTTSC-TTCHHHHHHHHHHHHHHCSCCCSCHHHH-----CCBHHHHHHHHHHHHHHTCS---EEEEE-
T ss_pred             cCCCEEEEEEccccccc-cCCHHHHHHHHHHHHHhCCCcccceeec-----cCcHHHHHHHHHHHHhhcCC---ceEEe-
Confidence            35566777765    33 247899999999987753 222221111     11356678999999999986   45665 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--c---CCCccEEEE
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--Q---NPDAKYLHI  214 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i---~~~~~lv~i  214 (430)
                      +|+++|+..++..+.+++|.|++-...+.+..  .-+...+ ++..+..      ....+++.+.  .   .+...+|++
T Consensus       112 ~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~--~G~~~~~a~~~~~~~------~d~~~le~~~~~~~~~~~~~~liv~  183 (401)
T d1fc4a_         112 SSCFDANGGLFETLLGAEDAIISDALNHASII--DGVRLCKAKRYRYAN------NDMQELEARLKEAREAGARHVLIAT  183 (401)
T ss_dssp             SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHH--HHHHTSCSEEEEECT------TCHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred             cchhhhhHHHHHHhcCCCcEEEeCCcchHHHH--ccccccCceEEEEcC------CChHHHHHHHHHhhhcccCceEEEE
Confidence            78999999999999999998876555555431  2222223 3333322      1111223322  2   244567777


Q ss_pred             eecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc---------cc-cccccEEEeCCCccc-cCCccEEEEEcHH
Q 043610          215 CANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP---------VD-VTRFGVIYAGAQKNV-GPSGVTIVIVRKD  280 (430)
Q Consensus       215 ~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~---------id-l~~~d~~~~s~~K~~-gp~G~g~l~v~~~  280 (430)
                      -.+.+..|.+.|  +|.++ +++|+++++|++|++|..-         .+ ..+.|+++++++|.+ |+.| |++..+++
T Consensus       184 egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg~~G-g~v~g~~~  262 (401)
T d1fc4a_         184 DGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GYTAARKE  262 (401)
T ss_dssp             ESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEECHH
T ss_pred             cCCCCCCCchhhhhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeecccccccCCc-ccccCCHH
Confidence            778788898888  88887 6899999999999988653         11 234589999999999 5666 89999999


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +++.+....+.+.          ....++.....++..+++.+..   .++.+++.+++.+++++.+.+ .|+.+..   
T Consensus       263 ~~~~l~~~~~~~~----------~s~~l~p~~~~aa~~~l~~~~~---~~~~~~~l~~~~~~~~~~l~~-~g~~~~~---  325 (401)
T d1fc4a_         263 VVEWLRQRSRPYL----------FSNSLAPAIVAASIKVLEMVEA---GSELRDRLWANARQFREQMSA-AGFTLAG---  325 (401)
T ss_dssp             HHHHHHHHCHHHH----------HSCCCCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHH-TTCCBCC---
T ss_pred             HHHHHHcCChhhh----------hcCCCCHHHHHHHHhhhccccc---CHHHHHHHHHHHHHHHhhhcc-cCCccCC---
Confidence            8876432111111          1124455666667778876652   378899999999999999996 6776542   


Q ss_pred             CCCccceEEEEcCCCchhHHHHHHHHHcCCeecC-CC--CC--CCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          361 SVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK-GH--RS--VGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~-g~--~~--~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       ..++ ++++.+.+.....++.++|.++||.+.+ .+  ..  ...+|++++..+|+||||+++++|+++.++.
T Consensus       326 -~~~p-Iv~v~~~~~~~a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~l  397 (401)
T d1fc4a_         326 -ADHA-IIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             -SSSS-EEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             -CCCC-EEEEEECCHHHHHHHHHHHHHCCceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence             1243 5666666422222688999999998643 11  11  2359999999999999999999999998764

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7e-20  Score=182.49  Aligned_cols=331  Identities=13%  Similarity=0.055  Sum_probs=215.1

Q ss_pred             CCCceeecCCC--CCCcHHHHHHHHHHhhhccCCCCcccccCCCc--HHHHHHHHHHHHHHHHHhCCCC--CcEEEEEeC
Q 043610           68 EDRVFNFAAGP--ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRG--KEFKSIIEKAESDLRALLNIPQ--EYSVLFLQG  141 (430)
Q Consensus        68 ~~~~~l~~~gp--~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~~~r~~la~l~g~~~--~~~vv~~~~  141 (430)
                      ++++++++.|-  .++|+.+++++.+.+.+-    .   ..++++  ....++.+.+.+.+.+.+|.+-  +.+|++ ++
T Consensus        24 ~~dvI~l~~G~p~~~~p~~v~~a~~~al~~~----~---~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~i-t~   95 (418)
T d1w7la_          24 EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGD----F---MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLV-TV   95 (418)
T ss_dssp             TSCCEECCCCSCSSCCCHHHHHHHHHHTSSC----G---GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEE-ES
T ss_pred             CCCCEECCCCCCCCCCCHHHHHHHHHHHhCC----C---cccCCCCCcCCHHHHHHHHHHHHHHhCCCCCcccceee-cc
Confidence            45688888776  467889999998877531    1   011222  1234445566677777778752  225766 58


Q ss_pred             cHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCC-c-------CCCCCCccccc--cCCCcc
Q 043610          142 GATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAE-K-------YTKIPNFDALE--QNPDAK  210 (430)
Q Consensus       142 gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~-~-------~g~~~d~~~l~--i~~~~~  210 (430)
                      |+++++..++..++.+||.|++..+.+..+.  ..+...| +.+.++..... .       .+..+|.+++.  ..++++
T Consensus        96 G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~--~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  173 (418)
T d1w7la_          96 GGYGALFTAFQALVDEGDEVIIIEPFFDCYE--PMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTK  173 (418)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCCTTEE
T ss_pred             CcHHHHHHHHHhhccCCceeeccccccchhH--HHHHHcCCEeeccccccccccccccccccCcccchhhhhcccccccc
Confidence            8999999999999999999998887766543  3455566 66666543210 0       01123333333  578899


Q ss_pred             EEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCC---C-Ccc---ccccc-c--EEEeCCCccccCCc--c
Q 043610          211 YLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFC---S-KPV---DVTRF-G--VIYAGAQKNVGPSG--V  272 (430)
Q Consensus       211 lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G---~-~~i---dl~~~-d--~~~~s~~K~~gp~G--~  272 (430)
                      ++++++++||||..++  +   |.++ ++++++++.|+++..-   . .+.   .+.+. |  +++.|++|.++.+|  +
T Consensus       174 ~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~Rv  253 (418)
T d1w7la_         174 ALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKV  253 (418)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCC
T ss_pred             ceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCcc
Confidence            9999999999999999  3   4443 5899999999987532   1 122   22222 3  78999999998777  9


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH-----hcCHHHHHHHHHHHHHHHHHHH
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE-----LGGLNEVEKMNRKKAELLYNVI  347 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~-----~~g~~~v~~~~~~l~~~l~~~l  347 (430)
                      |++++++++++.+.+.    .       .... ..++...+.++..++.....     ...+...+++++++++.+.+.|
T Consensus       254 G~~v~~~~~~~~l~~~----~-------~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L  321 (418)
T d1w7la_         254 GWVLGPDHIMKHLRTV----H-------QNSV-FHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSL  321 (418)
T ss_dssp             EEEECCHHHHHHHHHH----H-------HTTT-SCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhhhhhccc----c-------cccc-ccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhhhhhhh
Confidence            9999999887664220    0       0111 23455556666666643221     1235667888888999999999


Q ss_pred             HccCCceecCCCCCCCccceEEEEcCC-------------CchhHHHHHHH-HHcCCeecCCCC---------CCCeeEE
Q 043610          348 DGSNGFYKCPVEKSVRSFMNVPFTLEK-------------SDLEAEFVKEA-AKEKMVQLKGHR---------SVGGMRA  404 (430)
Q Consensus       348 ~~~~G~~~~~~~~~~rs~~iv~f~~~~-------------~~~~~~~~~~L-~~~Gi~~~~g~~---------~~g~iRi  404 (430)
                      .+ .|+.+...+    ...-+.+.+++             ...+.+++++| +++||.+.+|..         ..++|||
T Consensus       322 ~~-~g~~~~~P~----gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRi  396 (418)
T d1w7la_         322 QS-VGLKPLIPQ----GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRF  396 (418)
T ss_dssp             HT-TTCEEEECS----BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEE
T ss_pred             hh-cCCcccCCC----ceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEE
Confidence            86 788765311    11222233321             12234677775 667999987642         1358999


Q ss_pred             eecCCCCHHHHHHHHHHHHHHHH
Q 043610          405 SIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       405 s~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      |+.  ++++++++.++.|+++..
T Consensus       397 s~~--~~~~~l~~a~~rl~~~~~  417 (418)
T d1w7la_         397 CFV--KDEATLQAMDEKLRKWKV  417 (418)
T ss_dssp             ECC--CCHHHHHHHHHHHHHHHC
T ss_pred             EEc--CCHHHHHHHHHHHHHHhc
Confidence            985  488999999999998753

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.85  E-value=6.7e-20  Score=180.60  Aligned_cols=328  Identities=13%  Similarity=0.067  Sum_probs=209.6

Q ss_pred             cCCCCCceeecCCCC--CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEe
Q 043610           65 SGQEDRVFNFAAGPA--NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFLQ  140 (430)
Q Consensus        65 ~~~~~~~~l~~~gp~--~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~~  140 (430)
                      ...+.++++++.|-.  ++|+.+++++.+...+     ...|...   ....++.+.+.+.+.+..|.  +++ +|+++ 
T Consensus        24 ~~~g~~vi~l~~G~p~~~~p~~~~~al~~~~~~-----~~~Y~~~---~G~~~LR~aia~~~~~~~g~~~~~~-~I~it-   93 (389)
T d2gb3a1          24 KKRGVRIHHLNIGQPDLKTPEVFFERIYENKPE-----VVYYSHS---AGIWELREAFASYYKRRQRVDVKPE-NVLVT-   93 (389)
T ss_dssp             HHTTCEEEECSSCCCCSCCCTHHHHHHHHTCCS-----SCCCCCT---TCCHHHHHHHHHHHHHTSCCCCCGG-GEEEE-
T ss_pred             HHcCCCEEECCCCCCCCCCCHHHHHHHHhcCCC-----CCCCCCC---cCCHHHHHHHHHHHHHhcCCCcccc-eEEec-
Confidence            344567889988763  5688888988765422     1112111   11234445666666666665  354 67764 


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeec
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICAN  217 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~  217 (430)
                      +|+++++..++..++.+||.|++..+.++...  ..++..| ....++...+   +...+.+.+.  +.+++++++++++
T Consensus        94 ~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~--~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~nP  168 (389)
T d2gb3a1          94 NGGSEAILFSFAVIANPGDEILVLEPFYANYN--AFAKIAGVKLIPVTRRME---EGFAIPQNLESFINERTKGIVLSNP  168 (389)
T ss_dssp             SHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH--HHHHHHTCEEEEEECCGG---GTSCCCTTGGGGCCTTEEEEEEESS
T ss_pred             ccccccccccccccccCCCeEEEeCCCCcccc--ccccccCccccccccccc---cccchhhhhhhhcccCccEEEeCCC
Confidence            89999999999999999999999888776543  3455667 6666665432   2223334444  6789999999999


Q ss_pred             CCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCCc---cc-c---ccccEEEeCCCccccCCc--cEEEEEcHHHH
Q 043610          218 ETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSKP---VD-V---TRFGVIYAGAQKNVGPSG--VTIVIVRKDLL  282 (430)
Q Consensus       218 ~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~~---id-l---~~~d~~~~s~~K~~gp~G--~g~l~v~~~~~  282 (430)
                      +||||..++  +   |.++ +++++++|.|+++..-..+   .. .   .+..+++.|++|.++.+|  +|+++.+++.+
T Consensus       169 ~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~~~~~~~~i  248 (389)
T d2gb3a1         169 CNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEEL  248 (389)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHH
T ss_pred             CccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCcccceeeeeccchhH
Confidence            999999999  3   4443 5899999999987643221   11 1   111377889999998778  89998866543


Q ss_pred             hc-cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCC
Q 043610          283 GN-AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS  361 (430)
Q Consensus       283 ~~-~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~  361 (430)
                      .. ...     .      .  .....++...+.++..++....  ..++.+++++++.++.+.+.|++ .|+.... .+ 
T Consensus       249 ~~~~~~-----~------~--~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~-~p-  310 (389)
T d2gb3a1         249 ISHAMK-----L------A--QGRLAPPLLEQIGSVGLLNLDD--SFFDFVRETYRERVETVLKKLEE-HGLKRFT-KP-  310 (389)
T ss_dssp             HHHHHH-----H------H--HHSCCCCHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHHHHHHHH-TTCCCBC-CC-
T ss_pred             HHHHhh-----h------h--hccccccccccccccccccccc--hhcccccccccccchhhhhhhhh-hcccccc-CC-
Confidence            32 110     0      0  0113445555555555553221  23677888999999999999997 5554332 22 


Q ss_pred             CCccceEEEEcCCCchhHHHHHHHHHc------CCeecCCCC-------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          362 VRSFMNVPFTLEKSDLEAEFVKEAAKE------KMVQLKGHR-------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       362 ~rs~~iv~f~~~~~~~~~~~~~~L~~~------Gi~~~~g~~-------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      . ...-+.+.++.. .+.+|+++|.++      |+.+.+|..       ..+++|||+.  .+++++++.++.|++.+++
T Consensus       311 ~-~g~~~~~~lp~~-~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~--~~~~~l~~a~~~L~~~lk~  386 (389)
T d2gb3a1         311 S-GAFYITAELPVE-DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKM  386 (389)
T ss_dssp             S-BSSEEEEECSSS-CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             C-ceEEEEEeCCCC-CHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHHH
Confidence            1 223455677642 234788877543      555555421       1457999986  4788888888888777765


Q ss_pred             h
Q 043610          429 H  429 (430)
Q Consensus       429 ~  429 (430)
                      +
T Consensus       387 f  387 (389)
T d2gb3a1         387 F  387 (389)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.83  E-value=1.2e-19  Score=182.89  Aligned_cols=301  Identities=11%  Similarity=0.005  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHh-C-CceEEecCCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKF-C-NPQVIWSGKAE  192 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~-g-~~~~v~~~~~~  192 (430)
                      ..+.++++.+|+++|++   +.+|+++|+|.++.+++.++++|||+|++..+.|.+.  +..+... + .+.++....+ 
T Consensus        66 ~~i~eae~~~A~~~ga~---~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv--~~~~~~l~~~~~~~~~~~~~-  139 (462)
T d1c4ka2          66 GPAVAAEKHAARVYNAD---KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSV--YNSALAMAGGRPVYLQTNRN-  139 (462)
T ss_dssp             THHHHHHHHHHHHTTCS---EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHH--HHHHTTTTCCEEEEECEEEC-
T ss_pred             HHHHHHHHHHHHHhCCC---eEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHH--HHHHHHHhcCCceeeecccc-
Confidence            46779999999999986   5777777777788888888899999999887777653  1223233 2 3333322111 


Q ss_pred             cCCC--CCCccc--------------cc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc
Q 043610          193 KYTK--IPNFDA--------------LE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV  251 (430)
Q Consensus       193 ~~g~--~~d~~~--------------l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i  251 (430)
                      +.+.  .++.++              ++  +.+++.++++.+.+|..|.+.|  +|.++ +++|+++++|++|+.+....
T Consensus       140 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A~~~~~~~~  219 (462)
T d1c4ka2         140 PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFI  219 (462)
T ss_dssp             TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSS
T ss_pred             cccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEechhhcccccc
Confidence            1221  111111              12  3456778888899999999999  89886 79999999999998876543


Q ss_pred             ccc---------------cccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhh--cCCCCCCccHHHH
Q 043610          252 DVT---------------RFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDE--NNSLYNTPPCYCI  313 (430)
Q Consensus       252 dl~---------------~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~T~~~~~~  313 (430)
                      +..               ..|++++|+||++| +.|.+++..+...+.....    +.+.....+  .....++|+...+
T Consensus       220 ~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~~g~ll~~~~~~~~~~~~----~~~~~~~~~~~~~~~t~sp~~~~~  295 (462)
T d1c4ka2         220 PMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLR----YCDHKHFNNSFNLFMSTSPFYPMY  295 (462)
T ss_dssp             GGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTT----CCCHHHHHHHHHHHSCSSCCHHHH
T ss_pred             CcCCcchhhccccccccCCccEEEEecCcccccccceEEEEeccccccccch----hhhHHHHHHhhhhcccCCchHHHH
Confidence            321               13799999999998 5555556666655543211    111111000  0112257788888


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC--------------------------C-------
Q 043610          314 YMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE--------------------------K-------  360 (430)
Q Consensus       314 ~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~--------------------------~-------  360 (430)
                      .++..+..++... +.++..++..++++++++++.+..++......                          +       
T Consensus       296 asl~~a~~~~~~~-~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (462)
T d1c4ka2         296 AALDVNAAMQEGE-AGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAY  374 (462)
T ss_dssp             HHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCC
T ss_pred             HHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhccc
Confidence            8888888876533 45677788888889999998874332211000                          0       


Q ss_pred             -CCC------ccceEEEEcCC----------CchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHH
Q 043610          361 -SVR------SFMNVPFTLEK----------SDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFM  422 (430)
Q Consensus       361 -~~r------s~~iv~f~~~~----------~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L  422 (430)
                       ...      -++-+.+..++          .+... ++.+.|.++||..-.  ...+.||++++.++|++|||+++++|
T Consensus       375 ~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L~~~gI~~e~--~~~~~i~~~~s~~~T~edid~li~aL  452 (462)
T d1c4ka2         375 EGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEK--SDLNSILFLMTPAETPAKMNNLITQL  452 (462)
T ss_dssp             TTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSE--ECSSEEEEECCTTCCHHHHHHHHHHH
T ss_pred             cccCccceecccceeEEecCCccccccchhhcCCcHHHHHHHHHHcCCeeec--cCCCeEEEEecCCCCHHHHHHHHHHH
Confidence             000      01113333321          12233 677788889987532  12347999999999999999999999


Q ss_pred             HHHHHh
Q 043610          423 KDFQAK  428 (430)
Q Consensus       423 ~~~~~~  428 (430)
                      +++.+.
T Consensus       453 ~ei~r~  458 (462)
T d1c4ka2         453 LQLQRL  458 (462)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998764

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=6.4e-20  Score=182.75  Aligned_cols=331  Identities=12%  Similarity=0.109  Sum_probs=200.4

Q ss_pred             CCCCceeecCCC---CCCc-HHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC---CCCcEEEEE
Q 043610           67 QEDRVFNFAAGP---ANLP-EKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI---PQEYSVLFL  139 (430)
Q Consensus        67 ~~~~~~l~~~gp---~~~~-~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~---~~~~~vv~~  139 (430)
                      ..+++++|+.|-   ..+| +.+.+++.+.+..... ....|...   ....++.+.+.+.+++.+|.   +++ +|+++
T Consensus        36 ~~~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~-~~~~Y~~~---~G~~~LR~aia~~~~~~~g~~~~~~~-~I~it  110 (420)
T d1vp4a_          36 ADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYH-YTLQYSTT---EGDPVLKQQILKLLERMYGITGLDED-NLIFT  110 (420)
T ss_dssp             TSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHH-HHTSCCCT---TCCHHHHHHHHHHHHHHHCCCSCCGG-GEEEE
T ss_pred             CCCCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCc-cccCCCCC---cCCHHHHHHHHHHHHHHhCCCCCCHH-HeEec
Confidence            566799999883   2234 3445555554432110 00001111   12234455666667777765   344 67765


Q ss_pred             eCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-----------cCC
Q 043610          140 QGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-----------QNP  207 (430)
Q Consensus       140 ~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-----------i~~  207 (430)
                       +|+++++..++..++.|||+|++..+.++.+.  ..++..| ++..++..+   .+  .+++.++           +.+
T Consensus       111 -~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~--~~~~~~g~~~~~~~~~~---~~--~~~~~l~~~~~~~~~~~~~~~  182 (420)
T d1vp4a_         111 -VGSQQALDLIGKLFLDDESYCVLDDPAYLGAI--NAFRQYLANFVVVPLED---DG--MDLNVLERKLSEFDKNGKIKQ  182 (420)
T ss_dssp             -EHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH--HHHHTTTCEEEEEEEET---TE--ECHHHHHHHHHHHHHTTCGGG
T ss_pred             -cchhhhHHHHHHhhhccccccccccccccchh--HHHHHHhhhcccccccc---cc--cccchhhhhhhhhHHHhhccc
Confidence             78999999999999999999999888776542  3455667 777777643   22  3443321           123


Q ss_pred             CccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC---Ccc----cccccc--EEEeCCCccccCCc-
Q 043610          208 DAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---KPV----DVTRFG--VIYAGAQKNVGPSG-  271 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~~i----dl~~~d--~~~~s~~K~~gp~G-  271 (430)
                      .+.++++++++||||..++  +   |.++ +++++++++|++++.-.   ...    .....+  ++++++.|+++ +| 
T Consensus       183 ~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~~-~G~  261 (420)
T d1vp4a_         183 VKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGL  261 (420)
T ss_dssp             EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGG
T ss_pred             cceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEeccccccc-ccc
Confidence            3456777888999999999  3   4444 58999999999876322   111    111112  67788888876 56 


Q ss_pred             -cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-
Q 043610          272 -VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDG-  349 (430)
Q Consensus       272 -~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~-  349 (430)
                       +|+++.++++++.+.+... .           .....+...+.++...++.-.....++...+++++.++.+++.|.+ 
T Consensus       262 RiG~~~~~~~~i~~l~~~~~-~-----------~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~  329 (420)
T d1vp4a_         262 RIGMVAGSKEFIRKIVQAKQ-S-----------ADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEY  329 (420)
T ss_dssp             CEEEEECCHHHHHHHHHHHH-H-----------HHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccchhhhhhhhhhh-h-----------ccccCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhh
Confidence             9999999998876432100 0           0022344455555544432100012345556666666666666664 


Q ss_pred             ---cCCceecCCCCCCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCCCC------CCCeeEEeecCCCCHHHHHHHH
Q 043610          350 ---SNGFYKCPVEKSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHR------SVGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       350 ---~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~------~~g~iRis~~~~~t~edv~~ll  419 (430)
                         ..|+++..  +  .+...+.+.+++ +.+. ++.+.|.++||.+.+|..      ..+++|||++. .+++++++.+
T Consensus       330 ~~~~~g~~~~~--p--~gg~f~~~~~~~-~~d~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~~-~~~e~l~~a~  403 (420)
T d1vp4a_         330 FSDIPGVKWVK--S--EGGLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCL-PPDEKIVEGI  403 (420)
T ss_dssp             STTSTTCEECC--C--SBSSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSS-SCHHHHHHHH
T ss_pred             hccCCCcEEec--C--CceEEEEEECCC-CCCHHHHHHHHHHCCeEEEechhhCCCCCCCCEEEEEeCc-CCHHHHHHHH
Confidence               24666543  2  123345567775 3333 688889999999887642      14589999863 4678888888


Q ss_pred             HHHHHHHHhh
Q 043610          420 AFMKDFQAKH  429 (430)
Q Consensus       420 ~~L~~~~~~~  429 (430)
                      +.|+++++++
T Consensus       404 ~rL~~~l~~~  413 (420)
T d1vp4a_         404 KRLREVVLEY  413 (420)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            8887777654

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.83  E-value=1.5e-19  Score=180.87  Aligned_cols=287  Identities=14%  Similarity=0.101  Sum_probs=186.4

Q ss_pred             HHHHHHHHHHHHhC----CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHH-HhC-CceEEecC
Q 043610          116 IIEKAESDLRALLN----IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQ-KFC-NPQVIWSG  189 (430)
Q Consensus       116 ~~~~~r~~la~l~g----~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~-~~g-~~~~v~~~  189 (430)
                      +.+.+.+.+.+.+|    .+++ +|+++ +|+++++..++..+++|||+|++..+.+.+..  ..++ ..| +++.++..
T Consensus        89 LR~aiA~~l~~~~~~~~~~~pe-~I~it-~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~--~~~~~~~g~~~v~v~~~  164 (431)
T d1m7ya_          89 FKKAMVDFMAEIRGNKVTFDPN-HLVLT-AGATSANETFIFCLADPGEAVLIPTPYYPGFD--RDLKWRTGVEIVPIHCT  164 (431)
T ss_dssp             HHHHHHHHHHHHTTTSSCCCGG-GEEEE-EHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH--HHTTTTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHhCCCCCCCcc-eEEEC-CCHHHHHHHHHHHhcCCCCEEEEeCCCchhHH--HHHHHhcCceecccccc
Confidence            33445555555555    3344 67765 78999999999999999999998887765542  2222 235 55566655


Q ss_pred             CCCcCCCCCCccccc--------cCCCccEEEEeecCCCccccCC--CCcc---c-cCCCcEEEEeccCcCCC---C-cc
Q 043610          190 KAEKYTKIPNFDALE--------QNPDAKYLHICANETIHGVEFK--EYPS---A-KNSTGILVADMSSNFCS---K-PV  251 (430)
Q Consensus       190 ~~~~~g~~~d~~~l~--------i~~~~~lv~i~~~~t~tG~~~p--ei~~---~-~~~g~~lvvD~a~s~G~---~-~i  251 (430)
                      ++  .+..+|.+.++        ..++++++++++++||||.+.+  ++.+   + +++|+++|+|++++...   . .+
T Consensus       165 ~~--~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~  242 (431)
T d1m7ya_         165 SS--NGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFI  242 (431)
T ss_dssp             GG--GTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCC
T ss_pred             ch--hcccccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeecccccccccCCCCCC
Confidence            43  33346666553        2457899999999999999999  4444   3 57899999999876321   1 11


Q ss_pred             cc-------------cccc--EEEeCCCccccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHH
Q 043610          252 DV-------------TRFG--VIYAGAQKNVGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIY  314 (430)
Q Consensus       252 dl-------------~~~d--~~~~s~~K~~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~  314 (430)
                      ++             ...+  +++.|++|.+|.+|  +|+++.+++.+.......             ......+.....
T Consensus       243 s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~  309 (431)
T d1m7ya_         243 SVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKM-------------SSFGLVSSQTQH  309 (431)
T ss_dssp             CHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHH-------------GGGSCCCHHHHH
T ss_pred             CHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccchhhhHHHHHHH-------------hccccccccccc
Confidence            11             1123  67889999999778  899998877654321100             001122223333


Q ss_pred             HHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC----Cch--hHHHHHHH
Q 043610          315 MCGLVF---EYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK----SDL--EAEFVKEA  385 (430)
Q Consensus       315 a~~~al---~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~----~~~--~~~~~~~L  385 (430)
                      ++.+.+   +...  .-+++.++++++.++.+.+.|++ .|+.+.+.+    +..-+.+.++.    ...  +.+++++|
T Consensus       310 ~~~a~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~-~gi~~~~p~----gg~f~w~~l~~~~~~~~~~~~~~l~~~l  382 (431)
T d1m7ya_         310 LLSAMLSDKKLTK--NYIAENHKRLKQRQKKLVSGLQK-SGISCLNGN----AGLFCWVDMRHLLRSNTFEAEMELWKKI  382 (431)
T ss_dssp             HHHHHHHCHHHHH--HHHHHHHHHHHHHHHHHHHHHHT-TTCEECCCC----SSSEEEEECGGGSSSSSHHHHHHHHHHH
T ss_pred             hhhhhhccchhhh--hhhhhhhhhhhhhhhhhhhhhhc-CCcEEecCC----ceeEEEEECccccccCcccCHHHHHHHH
Confidence            333333   2222  13677888889999999999986 888876411    22334455542    111  22678776


Q ss_pred             H-HcCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          386 A-KEKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       386 ~-~~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      . ++||.+.+|..    ..|++||++. ..++++++..++.|++++++|
T Consensus       383 l~~~gV~v~PG~~F~~~~~~~~Ri~~a-~~~e~~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         383 VYEVHLNISPGSSCHCTEPGWFRVCFA-NLPERTLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             HHTSCEECEEGGGGTCSSTTEEEEECS-SSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCEEEEeccccCCCCCCEEEEEeC-cCCHHHHHHHHHHHHHHHHHh
Confidence            4 56999988642    3568999986 346788999999999999876

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.82  E-value=4.3e-19  Score=179.17  Aligned_cols=340  Identities=14%  Similarity=0.038  Sum_probs=214.6

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEEe
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQE--------YSVLFLQ  140 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~--------~~vv~~~  140 (430)
                      |+.+.+-+++. .++.++..+...+.+.  ++.    ....++....+..++-+++++++|.|++        -.-++ +
T Consensus        74 P~f~~~~~~~~-~~~~~l~~~~~~~~n~--n~~----~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~-~  145 (476)
T d1js3a_          74 PYFFAYFPTAS-SYPAMLADMLCGAIGC--IGF----SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI-Q  145 (476)
T ss_dssp             TTBCSSSCCCC-CHHHHHHHHHHHHHCC--CCS----SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE-E
T ss_pred             CCeeEeCCCCC-CHHHHHHHHHHHhhcc--ccc----chhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceE-C
Confidence            34444444443 4556666555554332  211    1234677888888999999999999742        12344 5


Q ss_pred             CcHHHHHHHHHhhc----C------CCC--------CcEEEE-eCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCc
Q 043610          141 GGATTQFAAVPLNL----C------TPN--------DPVDYI-VTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNF  200 (430)
Q Consensus       141 ~gaT~a~~~~~~sl----~------~~g--------d~vl~~-~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~  200 (430)
                      +|||+++...+...    +      .+|        +-++++ +..|++  +.+.+.-.| .++.+++++   .+ ..|+
T Consensus       146 ~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~S--i~ka~~~lGl~~~~v~~d~---~~-~md~  219 (476)
T d1js3a_         146 GSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSS--VERAGLIGGVKLKAIPSDG---KF-AMRA  219 (476)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHH--HHHHHHHHTCEEEEECCCT---TS-CCCH
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEecccccHH--HHHHHHhcCceEEEeccCC---CC-CcCH
Confidence            78999988665431    1      011        123333 344555  334455567 777777753   33 5788


Q ss_pred             cccc--cCC------CccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc--------ccccccEEEe
Q 043610          201 DALE--QNP------DAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV--------DVTRFGVIYA  261 (430)
Q Consensus       201 ~~l~--i~~------~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i--------dl~~~d~~~~  261 (430)
                      ++|+  +.+      .+-+|+.+...|.+|.+-|  +|+++ +++|+|++||++++......        .++..|.+..
T Consensus       220 ~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDpl~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~  299 (476)
T d1js3a_         220 SALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNF  299 (476)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEE
T ss_pred             HHHHHHHHHHHhcCCCcEEEeecCCCccceeeccHHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcccceeee
Confidence            8886  432      2457888889999999999  89997 68999999999976544332        1334589999


Q ss_pred             CCCcccc-CCccEEEEEcHH-HHhccCCCCCccccccch-------hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610          262 GAQKNVG-PSGVTIVIVRKD-LLGNAQDKTPLMLDYKIH-------DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV  332 (430)
Q Consensus       262 s~~K~~g-p~G~g~l~v~~~-~~~~~~~~~p~~~~~~~~-------~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v  332 (430)
                      ++|||++ |.|+|++++++. .+.......+.|+.....       .......++... ....+..+++.+-. .|++++
T Consensus       300 d~HK~l~~P~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~-~al~lw~~l~~~G~-~g~~~~  377 (476)
T d1js3a_         300 NPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRF-RSLKMWFVFRMYGV-KGLQAY  377 (476)
T ss_dssp             CHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCC-THHHHHHHHHHHHH-HHHHHH
T ss_pred             cCccccccCCcceeecccchHHHHHHHhcChhhhccccccccccccccccccccchhh-HHHHHHHHHHHHhH-hHHHHH
Confidence            9999996 999999999853 333221112222211100       001112233332 22345566666654 489999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-hhHHHHHHHHHcCCe-ecCCC-CCCCeeEEeecCC
Q 043610          333 EKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-LEAEFVKEAAKEKMV-QLKGH-RSVGGMRASIYNA  409 (430)
Q Consensus       333 ~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-~~~~~~~~L~~~Gi~-~~~g~-~~~g~iRis~~~~  409 (430)
                      .++..++++++++.|++..+|+++. ++  .. .+|+|++.+.+ ...++.++|.+.|-. +.+.. .....+|+++++.
T Consensus       378 i~~~~~lA~~l~~~l~~~~~fel~~-~p--~l-~iV~Fr~~~~d~~n~~l~~~l~~~G~~~~s~t~~~g~~~lR~~i~n~  453 (476)
T d1js3a_         378 IRKHVQLSHEFEAFVLQDPRFEVCA-EV--TL-GLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSR  453 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTEEECS-CC--CS-SEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCT
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEC-CC--ce-EEEEEEccCChHHHHHHHHHHHhcCCEEEeeeeECCEEEEEEEeCCC
Confidence            9999999999999999877999873 22  23 47999986532 233688888877743 22211 1112699999864


Q ss_pred             -CCHHHHHHHHHHHHHHHHh
Q 043610          410 -MPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       410 -~t~edv~~ll~~L~~~~~~  428 (430)
                       ++++||+.+++.|+++.++
T Consensus       454 ~Tt~~did~~~~~i~~~a~~  473 (476)
T d1js3a_         454 KVESGHVRLAWEHIRGLAAE  473 (476)
T ss_dssp             TCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence             7799999999999998753

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.81  E-value=2e-19  Score=179.74  Aligned_cols=284  Identities=16%  Similarity=0.104  Sum_probs=181.7

Q ss_pred             HHHHHHHHHHhC----CCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHH-HhC-CceEEecCCC
Q 043610          118 EKAESDLRALLN----IPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQ-KFC-NPQVIWSGKA  191 (430)
Q Consensus       118 ~~~r~~la~l~g----~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~-~~g-~~~~v~~~~~  191 (430)
                      +.+.+.+.+.+|    .+++ +|+++ +|+++++..++..++.|||+|++..+.+.+..  ..+. ..| +++.++....
T Consensus        90 ~aiA~~l~~~~~~~~~~~~e-~Ivit-~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~--~~~~~~~g~~~v~v~~~~~  165 (428)
T d1iaya_          90 KAIAKFMEKTRGGRVRFDPE-RVVMA-GGATGANETIIFCLADPGDAFLVPSPYYPAFN--RDLRWRTGVQLIPIHCESS  165 (428)
T ss_dssp             HHHHHHHHHHTTTCSCCCTT-SCEEE-EHHHHHHHHHHHHHCCTTCEEEEESSCCTTHH--HHTTTTTCCEEEEECCCTT
T ss_pred             HHHHHHHHHHhCCCCCCChh-hEEEc-CCHHHHHHHHHHHhCCCCCEEEEccCCchHHH--HHHHHhcCCeEEEeecccc
Confidence            344455555554    2344 67765 78999999999999999999998776655542  1222 335 5556655432


Q ss_pred             CcCCCCCCccccc--------cCCCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCC---C-cccc
Q 043610          192 EKYTKIPNFDALE--------QNPDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCS---K-PVDV  253 (430)
Q Consensus       192 ~~~g~~~d~~~l~--------i~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~---~-~idl  253 (430)
                        .+..+|.++++        ..++++++++++++||||...+  +   |.++ +++|+++++|++++...   . ...+
T Consensus       166 --~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~  243 (428)
T d1iaya_         166 --NNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSI  243 (428)
T ss_dssp             --TTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCH
T ss_pred             --cccccccccccchhhhhhccCCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCccccccc
Confidence              22346666542        4678999999999999999999  3   4443 58999999999986321   1 1111


Q ss_pred             -----------cccc--EEEeCCCccccCCc--cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHH
Q 043610          254 -----------TRFG--VIYAGAQKNVGPSG--VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCG  317 (430)
Q Consensus       254 -----------~~~d--~~~~s~~K~~gp~G--~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~  317 (430)
                                 ...+  +++.|++|.++.+|  +|+++..+ .+.+.+..    .       .   ..+..+...+.++.
T Consensus       244 ~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~~~l~~~~~~----~-------~---~~~~~~~~~~~~~~  309 (428)
T d1iaya_         244 AEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARK----M-------S---SFGLVSTQTQYFLA  309 (428)
T ss_dssp             HHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHH----H-------H---TTSCCCHHHHHHHH
T ss_pred             ccccchhhccccccceEEEEecCCCcccCCCcccccccccccchhhhhhh----h-------h---cccccccccccchh
Confidence                       1112  67899999998778  89988854 44443211    0       0   11222333333333


Q ss_pred             HHH---HHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCC----Cch-h-HHHHHHHH-H
Q 043610          318 LVF---EYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEK----SDL-E-AEFVKEAA-K  387 (430)
Q Consensus       318 ~al---~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~----~~~-~-~~~~~~L~-~  387 (430)
                      +.+   +++.  ..+++.+++++++++.+.+.|++ .|+++..  +.  +..-+.+.++.    ... + .++.++|. +
T Consensus       310 a~l~~~~~~~--~~~~~~~~~l~~r~~~~~~~L~~-~gi~~~~--p~--gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~  382 (428)
T d1iaya_         310 AMLSDEKFVD--NFLRESAMRLGKRHKHFTNGLEV-VGIKCLK--NN--AGLFCWMDLRPLLRESTFDSEMSLWRVIIND  382 (428)
T ss_dssp             HHTTCHHHHH--HHHHHHHHHHHHHHHHHHHHHHH-TTCCBCC--CS--SSSEEEEECGGGCSSSSHHHHHHHHHHHHHT
T ss_pred             hhhhhhcccc--ccccccccccchhHHHHHHHHHh-CCCEEec--CC--cceEEEEECccccccCCCCCHHHHHHHHHHh
Confidence            333   2222  13567788888889999999985 7887653  21  22234455542    112 2 25777775 5


Q ss_pred             cCCeecCCCC----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          388 EKMVQLKGHR----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       388 ~Gi~~~~g~~----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                      +||.+.+|..    ..|++|||+. ..++++++..++.|++++..+
T Consensus       383 ~gV~v~PG~~F~~~~~g~~Ris~a-~~~~~~l~~al~Rl~~~l~~~  427 (428)
T d1iaya_         383 VKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGVE  427 (428)
T ss_dssp             SCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEcchhcCCCCCCEEEEEeC-CCCHHHHHHHHHHHHHHHhhc
Confidence            6999888642    3568999985 456788999999999998754

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.80  E-value=4e-19  Score=169.22  Aligned_cols=307  Identities=11%  Similarity=0.003  Sum_probs=179.8

Q ss_pred             CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCC
Q 043610           78 PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTP  157 (430)
Q Consensus        78 p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~  157 (430)
                      +++.+|+|++||.+....   .+     ..+..   ...++++|+.+++++|.+.  +++|+ +|||+|++.++..+..+
T Consensus        12 ~~g~~P~v~~A~~~a~~~---~~-----~~~~~---~~~~~~l~~~la~~~g~~~--~v~f~-~sGt~An~~a~~~~~~~   77 (345)
T d1v72a1          12 IAGASPEVAQALVKHSSG---QA-----GPYGT---DELTAQVKRKFCEIFERDV--EVFLV-PTGTAANALCLSAMTPP   77 (345)
T ss_dssp             GCCCCHHHHHHHHHTTSS---CC-----CSTTC---SHHHHHHHHHHHHHHTSCC--EEEEE-SCHHHHHHHHHHTSCCT
T ss_pred             CCCCCHHHHHHHHHHhcc---Cc-----cccCC---CHHHHHHHHHHHHHHCCCc--EEEEC-CchHHHHHHHHHHHHhc
Confidence            344688999999875421   11     11111   2456799999999999865  67775 78999999999888888


Q ss_pred             CCcEEEEeCChhHHHHH-HHHHHhC-CceEEecCCCCcCCCCCCccccc--cCC------Ccc-EEEEeecCCCccccCC
Q 043610          158 NDPVDYIVTGSWGDKAF-KEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNP------DAK-YLHICANETIHGVEFK  226 (430)
Q Consensus       158 gd~vl~~~~g~~~~~~~-~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~------~~~-lv~i~~~~t~tG~~~p  226 (430)
                      ++.+++....+++.... ......+ ....+...    .....+++.++  +.+      .+. .+......+..|...+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (345)
T d1v72a1          78 WGNIYCHPASHINNDECGAPEFFSNGAKLMTVDG----PAAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYT  153 (345)
T ss_dssp             TEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCC----GGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCC
T ss_pred             CCccccccccceeeechhhHHHhcCccccccccc----ccccccHHHhhhhhcccccccccccceeeeeecccccccccc
Confidence            88877665555543211 1112233 33333332    22245666554  222      222 2333444555666655


Q ss_pred             --CC---ccc-cCCCcEEEEeccCcCCCCcccc---c----cc--cEEEeCCCccccCCccEEEEEcHHHHhccCCCCCc
Q 043610          227 --EY---PSA-KNSTGILVADMSSNFCSKPVDV---T----RF--GVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPL  291 (430)
Q Consensus       227 --ei---~~~-~~~g~~lvvD~a~s~G~~~idl---~----~~--d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~  291 (430)
                        ++   .++ +++|+++++|+++..+....+.   .    ..  +.++.+.+|+.++.+.+++...........     
T Consensus       154 ~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  228 (345)
T d1v72a1         154 LDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMS-----  228 (345)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHH-----
T ss_pred             chhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCccccccccccccccchhhhhhhcc-----
Confidence              33   333 5899999999998765432221   1    11  356666666664433233332222211100     


Q ss_pred             cccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEE
Q 043610          292 MLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFT  371 (430)
Q Consensus       292 ~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~  371 (430)
                             .......++.+... .++..+...+. .........+..++..++.+.+.+..|+.+..  + ..++ ++.+.
T Consensus       229 -------~~~~~~~~~~~~~~-~aa~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~--p-~~~n-iv~~~  295 (345)
T d1v72a1         229 -------YRRKRAGHLSSKMR-FLSAQIDAYLT-DDLWLRNARKANAAAQRLAQGLEGLGGVEVLG--G-TEAN-ILFCR  295 (345)
T ss_dssp             -------HHHHHTTCCCSSTH-HHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEES--C-CCSS-EEEEE
T ss_pred             -------ccccccccccchhh-HHhhhhHHHHH-HhhhhhhccchhhHHHHHHHHHHhcCCcEecc--C-CCcc-EEEEE
Confidence                   00000112222222 22222333232 23456677777788888999998877887653  1 1233 45566


Q ss_pred             cCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          372 LEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       372 ~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ++     .+++++|.++|+.+..+....+.+||+++.++|+||||+++++|++.
T Consensus       296 ~~-----~~~~~~L~~~gi~v~~~~~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         296 LD-----SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             EC-----HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             cC-----HHHHHHHHHcCCCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            54     35788999999987654444568999999999999999999999874

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.77  E-value=4.8e-18  Score=169.69  Aligned_cols=284  Identities=8%  Similarity=-0.011  Sum_probs=187.6

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC--CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCC
Q 043610          115 SIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC--TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKA  191 (430)
Q Consensus       115 ~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~--~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~  191 (430)
                      .+..+....+.+++|.+.  ...++.+|+++++.+++.+.-  .++++|++....|++.  .+.+...| +++.+....+
T Consensus       113 ~~~~~~~~~~~~~~g~~~--~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~--~k~~~~~g~~~~~v~~~~~  188 (434)
T d2z67a1         113 ALTNKILESFFKQLGLNV--HAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSP--IKAVSFVGMNMRLVETVLD  188 (434)
T ss_dssp             HHHHHHHHHHHHHTTCCC--EEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH--HHHHHHTTCEEEEECCEEE
T ss_pred             HHHHHHHHHHHHhcCCCc--ceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHH--HHHHHHhCCcceEEEeecC
Confidence            334455667888999876  456666677777777666642  3678888777777653  34444556 6666654221


Q ss_pred             CcCCCCCCccccc--cC-----CCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCC-----ccccc--
Q 043610          192 EKYTKIPNFDALE--QN-----PDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSK-----PVDVT--  254 (430)
Q Consensus       192 ~~~g~~~d~~~l~--i~-----~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~-----~idl~--  254 (430)
                      .+.+ .+|+++|+  ++     .++.+|+++++++.+|.+.|  +|+++ +++|+++++|++++.+..     +....  
T Consensus       189 ~~~~-~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~  267 (434)
T d2z67a1         189 GDRV-YVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY  267 (434)
T ss_dssp             TTEE-ECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS
T ss_pred             CCcc-CCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhccccccccccC
Confidence            1233 57888886  42     36778888999999999999  88886 689999999999976542     11111  


Q ss_pred             cccEEEeCCCcccc-CCccEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHH
Q 043610          255 RFGVIYAGAQKNVG-PSGVTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEV  332 (430)
Q Consensus       255 ~~d~~~~s~~K~~g-p~G~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v  332 (430)
                      ..|++++++||+++ |.|.|+++.++ ..++++....               .++.+......+..++..+.. .|++.+
T Consensus       268 ~~D~~~~s~hK~l~~~~g~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~a~l~~~~~-~g~~~~  331 (434)
T d2z67a1         268 RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSY---------------PGRASATPVVNTLVSLLSMGS-KNYLEL  331 (434)
T ss_dssp             CCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTTS---------------CSCBCSHHHHHHHHHHHHHHH-HHHHHH
T ss_pred             CcceEEEcCccccccCCCccccccCcHHHHHHHHhhc---------------ccccccchHHHHHHHHHHHHH-hcchhH
Confidence            24799999999995 99999998875 4454432211               122222333444444554443 378889


Q ss_pred             HHHHHHHHHHHHHHHHcc---CCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC-------------CC
Q 043610          333 EKMNRKKAELLYNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK-------------GH  396 (430)
Q Consensus       333 ~~~~~~l~~~l~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~-------------g~  396 (430)
                      .++..++++++++.|++.   .|+.++.  .  .....+.+.+..  ...++...|.+.||....             +.
T Consensus       332 ~~~~~~~a~~l~~~L~~l~~~~g~~ll~--~--~~~~~~~~~~~~--~~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~  405 (434)
T d2z67a1         332 VKNQKNSKKLLDELLNDLSKKTGGKFLD--V--ESPIASCISVNS--DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGT  405 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCCBCC--C--CCSSEEEEECSS--CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhcCceecC--C--CCCceeeeecCC--CHHHHHHHHHHcCCeeeehhhhccccCeeeecc
Confidence            999999999999888763   3555542  2  122334444432  123788889998885310             11


Q ss_pred             CCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          397 RSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       397 ~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      ...+++|+++..++|+||||+++++|+++
T Consensus       406 ~~~~~l~~~~s~~~T~edID~~i~~L~kI  434 (434)
T d2z67a1         406 YTHDYIVMNAAIGVRTEDIVNSVSKLEKI  434 (434)
T ss_dssp             CSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred             cCCCeEEEecCCCCCHHHHHHHHHHHhcC
Confidence            22457999999999999999999999863

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1.1e-17  Score=167.55  Aligned_cols=293  Identities=13%  Similarity=0.063  Sum_probs=185.7

Q ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc---CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecC
Q 043610          114 KSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL---CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSG  189 (430)
Q Consensus       114 ~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl---~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~  189 (430)
                      ..+..++.+++++++|.+.....+++++++..++.+++.+.   ..++++|++....|.+.  ...+...| +++.|...
T Consensus        93 ~~le~~~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~--~~a~~~~g~~~~~v~~~  170 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSC--FKSMVTAGFEPVVIENV  170 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHH--HHHHHHTTCEEEEECCE
T ss_pred             HHHHHHHHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHH--HHHHHHcCCeeEEEEee
Confidence            34555678889999999865455665444334444444443   24567777766666653  34455567 66666532


Q ss_pred             CCCcCCCCCCccccc--c----CCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc--------cc
Q 043610          190 KAEKYTKIPNFDALE--Q----NPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP--------VD  252 (430)
Q Consensus       190 ~~~~~g~~~d~~~l~--i----~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~--------id  252 (430)
                      ...+.+ .+|+++|+  +    .+++.+|+++++++++|.+.|  +|+++ +++|+++++|++++.+...        .+
T Consensus       171 ~~~~~~-~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~  249 (445)
T d3bc8a1         171 LEGDEL-RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGAR  249 (445)
T ss_dssp             EETTEE-ECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHH
T ss_pred             ccCccc-ccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhccC
Confidence            211233 57888876  3    346889999999999999999  89887 7899999999999877532        23


Q ss_pred             cccccEEEeCCCcccc-CCccEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHH
Q 043610          253 VTRFGVIYAGAQKNVG-PSGVTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLN  330 (430)
Q Consensus       253 l~~~d~~~~s~~K~~g-p~G~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~  330 (430)
                      +...|++++++|||++ |.|.|+++.++ ..++.+..   .+        .+...++++    +.+..++..+.. .++.
T Consensus       250 ~~~vd~~~~s~hK~~~~p~g~~~l~~~~~~~~~~~~~---~~--------~~~~~~~~~----~~~~~~~~~~g~-~~~~  313 (445)
T d3bc8a1         250 VGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MY--------PGRASASPS----LDVLITLLSLGC-SGYR  313 (445)
T ss_dssp             HSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HS--------CSCBCSHHH----HHHHHHHHHHHH-HHHH
T ss_pred             cCCcceEEecCccccccCCCCceeeeCChHHHHHHHH---HH--------hhcccCcch----HHHHHHHHHHhh-hcch
Confidence            3456899999999995 99999999875 44443211   00        011112222    223334443432 3677


Q ss_pred             HHHHHHHHHHHHHHHHHHcc---CCceecCCCCCCCccceEEEEcCC----CchhH-HHHHHHHHcCCeec---------
Q 043610          331 EVEKMNRKKAELLYNVIDGS---NGFYKCPVEKSVRSFMNVPFTLEK----SDLEA-EFVKEAAKEKMVQL---------  393 (430)
Q Consensus       331 ~v~~~~~~l~~~l~~~l~~~---~G~~~~~~~~~~rs~~iv~f~~~~----~~~~~-~~~~~L~~~Gi~~~---------  393 (430)
                      ...++..++.+++++.|.+.   .|..+.. .+....  ...+.+..    ...+. ++...|.+.||...         
T Consensus       314 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~l~-~~~~~~--~~~~~l~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~  390 (445)
T d3bc8a1         314 KLLKERKEMFVYLSTQLKKLAEAHNERLLQ-TPHNPI--SLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQ  390 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCBCC-CTTCSS--EEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCceeec-CCCCCc--ceEEEeeeccccCCCCHHHHHHHHHHcCCCcceeecccccc
Confidence            88888888888888888753   2444442 222222  22333321    12233 57778888887421         


Q ss_pred             -------CCCC------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          394 -------KGHR------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       394 -------~g~~------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                             .++.      ....+|++++.++|+||||++++.|++++++
T Consensus       391 ~i~~~~~~~~g~~~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kilk~  438 (445)
T d3bc8a1         391 TVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNI  438 (445)
T ss_dssp             EETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             chhhhhhhhcCCCCccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHHHH
Confidence                   0111      1235999999999999999999999998874

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.76  E-value=1.3e-18  Score=163.88  Aligned_cols=307  Identities=18%  Similarity=0.083  Sum_probs=176.4

Q ss_pred             CCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC
Q 043610           76 AGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC  155 (430)
Q Consensus        76 ~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~  155 (430)
                      -.+...+|.|+++|++....   .+      ..++.  .+..+++|+.+++++|++++ +|+|+ +|+|++++.++..+.
T Consensus         7 d~~~g~~P~v~eAl~~~~~~---~~------~~y~~--~~~~~~lr~~ia~~~g~~~~-~v~~t-sggtean~~a~~~~~   73 (340)
T d1svva_           7 DYSVGMHPKILDLMARDNMT---QH------AGYGQ--DSHCAKAARLIGELLERPDA-DVHFI-SGGTQTNLIACSLAL   73 (340)
T ss_dssp             SCSSCCCHHHHHHHHHHTTC---CC------CSTTC--SHHHHHHHHHHHHHHTCTTS-EEEEE-SCHHHHHHHHHHHHC
T ss_pred             CCCCCCCHHHHHHHHHHhhc---CC------CCCCC--CHHHHHHHHHHHHHhCCCcc-eEEEc-CCHHHHHHHHHHHHh
Confidence            34445578999999876431   01      11111  24557899999999999876 88875 789999999999998


Q ss_pred             CCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-------cCCCccEEEEeecCCCccccCC-
Q 043610          156 TPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-------QNPDAKYLHICANETIHGVEFK-  226 (430)
Q Consensus       156 ~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-------i~~~~~lv~i~~~~t~tG~~~p-  226 (430)
                      .+++++++....+.+..........+ ....+....    ....+.+...       .......+.+++..+..|.+.+ 
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (340)
T d1svva_          74 RPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPD----GKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTK  149 (340)
T ss_dssp             CTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTT----SCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCH
T ss_pred             hhccccccccccceeeeecccccccceeeeeccccc----ccccchhHHHHhhhhhcccCCcceeeeecccccccccccH
Confidence            99998887666655432111112223 222222211    1111111111       1122344555555556666665 


Q ss_pred             -CCc---cc-cCCCcEEEEeccCcCCCCcccccc---------ccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcc
Q 043610          227 -EYP---SA-KNSTGILVADMSSNFCSKPVDVTR---------FGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLM  292 (430)
Q Consensus       227 -ei~---~~-~~~g~~lvvD~a~s~G~~~idl~~---------~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~  292 (430)
                       ++.   .. +++|.++++|+++..+..+.+...         .+....+..|..+..+.++.............     
T Consensus       150 ~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  224 (340)
T d1svva_         150 QELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARH-----  224 (340)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHH-----
T ss_pred             HHhhhhhcccccccceeeeeccceeeeecccccccccccccccceeeecCCccccccccccccccchhhhhhhhh-----
Confidence             333   32 578999999999865444322211         13667777777765554555444333221100     


Q ss_pred             ccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc
Q 043610          293 LDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL  372 (430)
Q Consensus       293 ~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~  372 (430)
                             ......++.+.....+ .+++. ..+..+.....++...++.++++.+.+ .|+.+..  + ..++ ++.+.+
T Consensus       225 -------~~~~~~~~~~~~~~~~-aa~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~--p-~~~~-~v~~~~  290 (340)
T d1svva_         225 -------LIKQRGALMAKGWLLG-IQFEV-LMKDNLFFELGAHSNKMAAILKAGLEA-CGIRLAW--P-SASN-QLFPIL  290 (340)
T ss_dssp             -------HHHHTTCCCTTTHHHH-HHHHH-HTSTTHHHHHHHHHHHHHHHHHHHHHH-TTCCBSS--C-CSSS-EECBEE
T ss_pred             -------hcccccCccchhhHHH-HHHHH-HhhhhHHHHHHHHHHHHHhhhHHHHhc-CCCeeec--C-CCce-EEEEeC
Confidence                   0000112222222211 12222 222445677888899999999999996 8888753  2 1233 344444


Q ss_pred             CCCchhHHHHHHHHHcCCe----ecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          373 EKSDLEAEFVKEAAKEKMV----QLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       373 ~~~~~~~~~~~~L~~~Gi~----~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +     .+..+.|.+++..    ..+  ...+.+|||+++++|++|||+++++|+++
T Consensus       291 ~-----~~~~~~l~~~~~~~~~~~~~--~~~~~vR~s~~~~~t~edid~~l~~l~~l  340 (340)
T d1svva_         291 E-----NTMIAELNNDFDMYTVEPLK--DGTCIMRLCTSWATEEKECHRFVEVLKRL  340 (340)
T ss_dssp             E-----HHHHHHHTTTEECEEEEEET--TTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred             C-----HHHHHHHHHhhhhhcccccC--CCCcEEEEECCCCCCHHHHHHHHHHHhcC
Confidence            3     3466666665443    222  12457999999999999999999999873

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.76  E-value=2.9e-17  Score=158.81  Aligned_cols=333  Identities=14%  Similarity=0.126  Sum_probs=223.6

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHH-HHHHHHHHHhCCCCCcEEEEEeCcHHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIE-KAESDLRALLNIPQEYSVLFLQGGATTQ  146 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~-~~r~~la~l~g~~~~~~vv~~~~gaT~a  146 (430)
                      +.+.+++.+....+++.|++++...+.+-...|... ...+.+-++.+.+| -+.+..+++||+..- +  +-.-||+.|
T Consensus        22 q~~~l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg-~ryy~G~~~id~iE~la~~ra~~lF~a~~a-n--Vqp~SGs~A   97 (405)
T d1kl1a_          22 QHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPG-RRYYGGCEYVDIVEELARERAKQLFGAEHA-N--VQPHSGAQA   97 (405)
T ss_dssp             HHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHCCSEE-E--CCCSSHHHH
T ss_pred             HHcCceEeccCCcCCHHHHHHhcCcccCcCcCCCCC-ccccCCchhHHHHHHHHHHHHHHHhCCCcc-e--eeccCchHH
Confidence            345788889888899999999988886533333311 23344455554444 456888899999742 3  334689999


Q ss_pred             HHHHHhhcCCCCCcEEEEeC---ChhHHHHH-HHHHHhCCceEEecCCCCcCCCCCCccccc---cCCCccEEEEeecCC
Q 043610          147 FAAVPLNLCTPNDPVDYIVT---GSWGDKAF-KEAQKFCNPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICANET  219 (430)
Q Consensus       147 ~~~~~~sl~~~gd~vl~~~~---g~~~~~~~-~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~~t  219 (430)
                      +.+++.++++|||+|+.++.   |+.++... ....+.-+....+.++   .+..+|.|+++   ...++|+|++-... 
T Consensus        98 n~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~---~~~~ID~d~l~~~a~~~kPklIi~G~S~-  173 (405)
T d1kl1a_          98 NMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP---ETHVIDYDDVREKARLHRPKLIVAAASA-  173 (405)
T ss_dssp             HHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCT---TTCSBCHHHHHHHHHHHCCSEEEECCSS-
T ss_pred             HHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccch---hcccccHHHHHHHHHhhCcceEEecccc-
Confidence            99999999999999998763   34443210 0111111344445543   22368999887   35678988886533 


Q ss_pred             CccccCC--CCccc-cCCCcEEEEeccCcCC-----CCccccccccEEEeCCCccc-cCCccEEEEEcHHHHhccCC-CC
Q 043610          220 IHGVEFK--EYPSA-KNSTGILVADMSSNFC-----SKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGNAQD-KT  289 (430)
Q Consensus       220 ~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G-----~~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~~~~-~~  289 (430)
                       .-..+|  ++.++ .+.|+++++|++|-.|     ..|-.++..|+++++.||.| ||.| |+++.+++..++++. ..
T Consensus       174 -y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~~aDvvt~tThKtlrGPrg-g~I~~~~~~~~~i~~avf  251 (405)
T d1kl1a_         174 -YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKAIF  251 (405)
T ss_dssp             -CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHHHT
T ss_pred             -cccccChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChhhhhhheeccccccccCCCC-ceEEecchhHHHHHhhhC
Confidence             234444  56665 5789999999998644     34444555699999999999 8999 999888887665432 11


Q ss_pred             CccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEE
Q 043610          290 PLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVP  369 (430)
Q Consensus       290 p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~  369 (430)
                      |.            ..|.|-...+++.+.+|.+..+. .+.+-.+...+.++.|.+.|.+ .|+.++. .. ..+ +.+.
T Consensus       252 Pg------------~qggp~~~~iAa~Aval~Ea~~~-~fk~Ya~qvv~NAkaLa~~L~~-~G~~vv~-gg-Td~-H~vl  314 (405)
T d1kl1a_         252 PG------------IQGGPLMHVIAAKAVAFGEALQD-DFKAYAKRVVDNAKRLASALQN-EGFTLVS-GG-TDN-HLLL  314 (405)
T ss_dssp             TT------------TCSSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-GS-CSS-SEEE
T ss_pred             cc------------cccCcchhHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHhc-CCceeec-CC-Ccc-ceee
Confidence            21            22566667788888888765432 4567778888888999999986 8999874 11 123 4566


Q ss_pred             EEcCCCchhH-HHHHHHHHcCCeec----CCC-C---CCCeeEEeecC----CCCHHHHHHHHHHHHHHHH
Q 043610          370 FTLEKSDLEA-EFVKEAAKEKMVQL----KGH-R---SVGGMRASIYN----AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       370 f~~~~~~~~~-~~~~~L~~~Gi~~~----~g~-~---~~g~iRis~~~----~~t~edv~~ll~~L~~~~~  427 (430)
                      +.+.+.+... +..+.|.+.||.+-    |+. +   ...+|||+...    -..++|++++.+.|.++++
T Consensus       315 vdl~~~~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~  385 (405)
T d1kl1a_         315 VDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK  385 (405)
T ss_dssp             EECGGGTCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred             ccccccCCcHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence            6775434445 45566888899853    332 1   13589999654    3579999999999998875

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.75  E-value=7.3e-18  Score=166.72  Aligned_cols=327  Identities=14%  Similarity=0.022  Sum_probs=196.5

Q ss_pred             CCCceeecCC----C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEE
Q 043610           68 EDRVFNFAAG----P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLF  138 (430)
Q Consensus        68 ~~~~~l~~~g----p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~  138 (430)
                      .++.+|++.|    +   .++.+.|+++......+-...+++   .....+++   .+.+.+.+.+..+.  +++ .++.
T Consensus        27 ~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~---~~~G~~~l---r~aia~~~~~~~~~~~~~~-~i~~   99 (401)
T d7aata_          27 NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYL---PIAGLADF---TRASAELALGENSEAFKSG-RYVT   99 (401)
T ss_dssp             CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCC---CTTCCHHH---HHHHHHHHHCTTCHHHHTT-CEEE
T ss_pred             CCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCC---CCCCCHHH---HHHHHHHHhccCCcccCcC-ceEE
Confidence            4567888888    2   355688988877666542222221   11222333   33444444333332  233 4554


Q ss_pred             EeCcHH----HHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-----cCCC
Q 043610          139 LQGGAT----TQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-----QNPD  208 (430)
Q Consensus       139 ~~~gaT----~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-----i~~~  208 (430)
                      +.++++    .++..++..++.|||+|++.++.+..+.  ..++..| +++.++..++  .+..++.+.+.     ..++
T Consensus       100 ~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~--~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  175 (401)
T d7aata_         100 VQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHT--PIFRDAGLQLQAYRYYDP--KTCSLDFTGAMEDISKIPEK  175 (401)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHH--HHHHHTTCEEEEEECEET--TTTEECHHHHHHHHTTSCTT
T ss_pred             eccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchh--hHHHHcCCeEEEEecccc--ccccccHHHHHHHHhcCCCc
Confidence            433333    3455566778899999999988877653  3456677 8888887543  22234555432     3678


Q ss_pred             ccEEEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCCc---cc------cccc-c--EEEeCCCccccCC
Q 043610          209 AKYLHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSKP---VD------VTRF-G--VIYAGAQKNVGPS  270 (430)
Q Consensus       209 ~~lv~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~~---id------l~~~-d--~~~~s~~K~~gp~  270 (430)
                      ++++++++++||||..++     +|.++ ++++++++.|+++..-...   .+      .... +  +++.+++|.++.+
T Consensus       176 ~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~  255 (401)
T d7aata_         176 SIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLY  255 (401)
T ss_dssp             CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCG
T ss_pred             eEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcccceeEeccccceee
Confidence            999999999999999999     35554 6899999999987633321   11      1111 2  6778999999988


Q ss_pred             c--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHH--HHH--hcCHHHHHHHHHHHHHHHH
Q 043610          271 G--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEY--LLE--LGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       271 G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~--l~~--~~g~~~v~~~~~~l~~~l~  344 (430)
                      |  +|++++.++.++....... .+..   ... .....++...+..+...++.  +.+  ...++.++++++++++.+.
T Consensus       256 G~RiG~~~~~~~~~~~~~~~~~-~~~~---~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~  330 (401)
T d7aata_         256 GERAGAFTVICRDAEEAKRVES-QLKI---LIR-PMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLV  330 (401)
T ss_dssp             GGCEEEEEEECSSHHHHHHHHH-HHHH---HHH-HHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeecchHHHHHHHHHHH-HHHH---Hhh-ccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8  8999988776554211000 0000   000 01123344455555444431  110  1135677888889999999


Q ss_pred             HHHHccCCc----eecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHH
Q 043610          345 NVIDGSNGF----YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLV  419 (430)
Q Consensus       345 ~~l~~~~G~----~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll  419 (430)
                      ++|++ .|.    ..++  +  .. +.+++ ++   ++.+++++| +++||.+.+|      +|||+.. .++++|+++.
T Consensus       331 ~~L~~-~~~~~~~~~~~--~--~~-G~F~~-~~---ls~e~~~~L~~e~gV~~~pg------~Ris~a~-~~~~~i~~la  393 (401)
T d7aata_         331 SNLKK-EGSSHNWQHIT--D--QI-GMFCF-TG---LKPEQVERLTKEFSIYMTKD------GRISVAG-VASSNVGYLA  393 (401)
T ss_dssp             HHHHH-TTCCSCCHHHH--H--CC-SSEEE-CC---CCHHHHHHHHHHHCEECCTT------CEEEGGG-CCTTTHHHHH
T ss_pred             HHHHH-hCCCCCcceEC--C--CC-eEEEe-cC---CCHHHHHHHHHhCCEEECCC------cEEEecc-CCHHHHHHHH
Confidence            99987 332    2221  1  12 22332 32   345677777 5679998875      6999874 4677899999


Q ss_pred             HHHHHHHH
Q 043610          420 AFMKDFQA  427 (430)
Q Consensus       420 ~~L~~~~~  427 (430)
                      ++|.++++
T Consensus       394 ~ai~~v~k  401 (401)
T d7aata_         394 HAIHQVTK  401 (401)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99998764

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.74  E-value=1.7e-16  Score=157.59  Aligned_cols=263  Identities=14%  Similarity=0.075  Sum_probs=166.8

Q ss_pred             CcEEEEEeCcHHHHHHHHHhhc--------CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCcccc
Q 043610          133 EYSVLFLQGGATTQFAAVPLNL--------CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDAL  203 (430)
Q Consensus       133 ~~~vv~~~~gaT~a~~~~~~sl--------~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l  203 (430)
                      +..|++. +|+|+++++++.+|        +.|||+|++..+.+..++  ..++..+ +...+.          .|.+.+
T Consensus       123 ~~~IvvG-~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~--~~~~~~~~~~~~~~----------~D~~~~  189 (425)
T d2hoxa1         123 DRYIVFG-VGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFR--EQTKYFDKKGYVWA----------GNAANY  189 (425)
T ss_dssp             TCEEEEE-SHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHH--HHHHHSCBTTEEEE----------EEGGGG
T ss_pred             CCEEEEC-CCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHH--HHHHHcCCCCCccC----------CCHHHH
Confidence            3357765 78999999999988        468999998776555543  2344455 443222          455555


Q ss_pred             c--cCCCccEEEEeecCCCccccCCCCccccCCCcEEEEeccCcCCC-Ccc-ccccccEEEeCCCccccCCc--cEEEEE
Q 043610          204 E--QNPDAKYLHICANETIHGVEFKEYPSAKNSTGILVADMSSNFCS-KPV-DVTRFGVIYAGAQKNVGPSG--VTIVIV  277 (430)
Q Consensus       204 ~--i~~~~~lv~i~~~~t~tG~~~pei~~~~~~g~~lvvD~a~s~G~-~~i-dl~~~d~~~~s~~K~~gp~G--~g~l~v  277 (430)
                      +  ++++++++++|+++||||.+...    ..+++.+|.|+++.... .++ ...+-++++.|++|.+|.+|  +|++++
T Consensus       190 ~~~~~~~~~ii~l~sPnNPtG~l~~~----v~~~~~~I~DEaY~~~~f~~~~~~~~~~Ivl~S~SK~fglaGlRiGw~i~  265 (425)
T d2hoxa1         190 VNVSNPEQYIEMVTSPNNPEGLLRHA----VIKGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALI  265 (425)
T ss_dssp             TTCSCGGGEEEEEESSCTTTCCCCCC----SSTTCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred             HhhCCCCceEEEEECCCCCCcchhhh----hhhCCEEEEeccccCccccchhhhcCCeEEEEeCHHhccCcchheeeEEe
Confidence            5  67899999999999999987442    23578999999874322 122 12222589999999999989  899888


Q ss_pred             cHH-HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHH---------hcCHHHHHHHHHHHHHHHHHHH
Q 043610          278 RKD-LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLE---------LGGLNEVEKMNRKKAELLYNVI  347 (430)
Q Consensus       278 ~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~---------~~g~~~v~~~~~~l~~~l~~~l  347 (430)
                      +++ +.+.+..    +..+        ...+++...+.++..+|+....         ..-++..++++++.++++++.|
T Consensus       266 ~~~~i~~~~~~----~~~~--------~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L  333 (425)
T d2hoxa1         266 KDESVYNNLLN----YMTK--------NTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALL  333 (425)
T ss_dssp             CCHHHHHHHHH----HHHH--------HTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHH----hhcc--------CcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            754 4344321    1111        1135667777777777764321         1124556777788888899999


Q ss_pred             HccCCceecCC-CCCC---------CccceEEEEcCCCchhHHHHHHHHHcCCeecCCCC---CCCeeEEeecCCCCHHH
Q 043610          348 DGSNGFYKCPV-EKSV---------RSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHR---SVGGMRASIYNAMPLAG  414 (430)
Q Consensus       348 ~~~~G~~~~~~-~~~~---------rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~---~~g~iRis~~~~~t~ed  414 (430)
                      .+..++.+... .+..         ..+.-..+.... ..+....+.|.++||.+.+|..   ..+++|||+..  ++|+
T Consensus       334 ~~~~~~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~-~~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~~--~~e~  410 (425)
T d2hoxa1         334 DQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK--TQDD  410 (425)
T ss_dssp             TTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS-GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS--CHHH
T ss_pred             HhcCCceeeccCCccceeeeeeccCCCcceeeeeCCC-ChHHHHHHHHHhCCEEEEechhcCCCCCEEEEEecC--CHHH
Confidence            87433322111 1100         001111222221 1111345567889999887643   24689999864  7889


Q ss_pred             HHHHHHHHHHHHH
Q 043610          415 VEKLVAFMKDFQA  427 (430)
Q Consensus       415 v~~ll~~L~~~~~  427 (430)
                      ++++++.|+++++
T Consensus       411 ld~~l~rL~~~v~  423 (425)
T d2hoxa1         411 FDQLMYYLKDMVK  423 (425)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999875

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=1.1e-16  Score=155.34  Aligned_cols=331  Identities=16%  Similarity=0.140  Sum_probs=220.8

Q ss_pred             CCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHH-HHHHHHHHhCCCCCcEEEEEeCcHHHHH
Q 043610           69 DRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEK-AESDLRALLNIPQEYSVLFLQGGATTQF  147 (430)
Q Consensus        69 ~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~-~r~~la~l~g~~~~~~vv~~~~gaT~a~  147 (430)
                      .+.+++.+..-.+++.|++++...+.+-...|... ...+.+-++.+.+|. +.+..+++||+... +|  -.-|++.|+
T Consensus        26 ~~~i~LiaSEN~~S~~v~~a~~S~l~nkYaeG~pg-~Ryy~G~~~iD~iE~la~~ra~~lF~a~~a-nV--qp~SGs~AN  101 (416)
T d1dfoa_          26 EEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPG-KRYYGGCEYVDIVEQLAIDRAKELFGADYA-NV--QPHSGSQAN  101 (416)
T ss_dssp             HHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSEE-EC--CCSSHHHHH
T ss_pred             HcCceEecCcccCCHHHHHHhcCcccCcccCCCCC-CcccCCChhHHHHHHHHHHHHHHHhCCCcc-ee--ecccCccHH
Confidence            45788889998899999999988886543444321 123345555555554 46777889999742 33  346899999


Q ss_pred             HHHHhhcCCCCCcEEEEeCC---hhHHHH-HHHHHHhCCceEEecCCCCcCCCCCCccccc---cCCCccEEEEeecCCC
Q 043610          148 AAVPLNLCTPNDPVDYIVTG---SWGDKA-FKEAQKFCNPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLHICANETI  220 (430)
Q Consensus       148 ~~~~~sl~~~gd~vl~~~~g---~~~~~~-~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~i~~~~t~  220 (430)
                      .+++.++++|||+|+.+...   +.++.. .....+.-+.....++   +.+ .+|.|+++   ...++|+|++..  +.
T Consensus       102 ~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d---~~~-~IDyd~l~~~a~~~kPklIi~G~--S~  175 (416)
T d1dfoa_         102 FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGID---ATG-HIDYADLEKQAKEHKPKMIIGGF--SA  175 (416)
T ss_dssp             HHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBC---SSS-SBCHHHHHHHHHHHCCSEEEEEC--SS
T ss_pred             HHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccC---Ccc-CccHHHHHHHHHHhccceEEecc--cc
Confidence            99999999999999987644   333211 0111111123333332   234 48998886   356889888874  44


Q ss_pred             ccccCC--CCccc-cCCCcEEEEeccCcCCC-----CccccccccEEEeCCCccc-cCCccEEEEEc---HHHHhccCC-
Q 043610          221 HGVEFK--EYPSA-KNSTGILVADMSSNFCS-----KPVDVTRFGVIYAGAQKNV-GPSGVTIVIVR---KDLLGNAQD-  287 (430)
Q Consensus       221 tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~-----~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~---~~~~~~~~~-  287 (430)
                      ....+|  ++.++ .+.|+++++|++|..|-     .|-.+...|+++++.||.| ||.| |+++.+   +++.++++. 
T Consensus       176 y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~aDvvt~tThKtlrGPrg-giI~~~~~~~~~~~~i~~a  254 (416)
T d1dfoa_         176 YSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRG-GLILAKGGSEELYKKLNSA  254 (416)
T ss_dssp             CCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTTSSEEEEESSSTTCCCSC-EEEEESSCCHHHHHHHHHH
T ss_pred             cccccCHHHHHHHHHhcCceEEcchhhhhcceeccccCCcccccceeeeehhhcccCCCc-eEEEeccchHhHHHHHHhh
Confidence            456666  67776 58899999999997653     3434555699999999999 8999 888886   344443321 


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccce
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMN  367 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~i  367 (430)
                      ..|.            ..|.|-...+++...+|.+..+. .+.+-.++..+.++.|.+.|.+ .|+.++. .. ..+ +.
T Consensus       255 vfPg------------~qggp~~~~iaa~Aval~Ea~~~-~fk~Y~~qvv~NA~~La~~L~~-~G~~iv~-gg-Tdn-Hl  317 (416)
T d1dfoa_         255 VFPG------------GQGGPLMHVIAGKAVALKEAMEP-EFKTYQQQVAKNAKAMVEVFLE-RGYKVVS-GG-TDN-HL  317 (416)
T ss_dssp             HTTT------------TCSSCCHHHHHHHHHHHHHTTSH-HHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-GS-CSS-SE
T ss_pred             hCcc------------cccCccHHHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHh-CCccccc-CC-CCC-ce
Confidence            1121            22455566777777788764322 4567778888889999999997 7999874 11 123 45


Q ss_pred             EEEEcCCCchhH-HHHHHHHHcCCeec----CCC-C---CCCeeEEeecC----CCCHHHHHHHHHHHHHHHH
Q 043610          368 VPFTLEKSDLEA-EFVKEAAKEKMVQL----KGH-R---SVGGMRASIYN----AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       368 v~f~~~~~~~~~-~~~~~L~~~Gi~~~----~g~-~---~~g~iRis~~~----~~t~edv~~ll~~L~~~~~  427 (430)
                      +.+.+.+.+.+. ++.+.|.+.||.+-    |+. .   ...+|||+...    -..++|++++.+.|.+.+.
T Consensus       318 vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~  390 (416)
T d1dfoa_         318 FLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLD  390 (416)
T ss_dssp             EEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             eEEEecccCCCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            667775444455 56667888999853    332 1   13589999654    3468999999999988875

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.73  E-value=1.9e-17  Score=157.74  Aligned_cols=311  Identities=11%  Similarity=0.029  Sum_probs=176.0

Q ss_pred             CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCC
Q 043610           79 ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPN  158 (430)
Q Consensus        79 ~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~g  158 (430)
                      +.++|+|++||.+..     .|...|   ..++    ...++++.|++++|.+   +++++ +|||+|+.+++..+.++|
T Consensus        10 t~p~p~v~~A~~~a~-----~g~~~y---g~~p----~~~~le~~lA~~~G~~---~~~~~-~sGt~A~~~al~a~~~~g   73 (343)
T d1m6sa_          10 TKPTEEMRKAMAQAE-----VGDDVY---GEDP----TINELERLAAETFGKE---AALFV-PSGTMGNQVSIMAHTQRG   73 (343)
T ss_dssp             CCCCHHHHHHHHTCC-----CCCGGG---TCCH----HHHHHHHHHHHHTTCS---EEEEE-SCHHHHHHHHHHHHCCTT
T ss_pred             CCCCHHHHHHHHhhh-----cCCccc---CCCH----HHHHHHHHHHHHHCCC---eEEEe-CCHHHHHHHHHHHHhccC
Confidence            445678999997642     232222   1123    3558889999999986   46665 689999999999999999


Q ss_pred             CcEEEEeCChhHHHHHHHHHHhCCceEEecCCCCcCCCCCCccccc--cC------CCccEEEEe-ecCCCccccCC--C
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKFCNPQVIWSGKAEKYTKIPNFDALE--QN------PDAKYLHIC-ANETIHGVEFK--E  227 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~--i~------~~~~lv~i~-~~~t~tG~~~p--e  227 (430)
                      |.+++....+++..........+...+.....  ..+ ..+++.++  +.      ++++.+.+. .++++.|.+.|  +
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (343)
T d1m6sa_          74 DEVILEADSHIFWYEVGAMAVLSGVMPHPVPG--KNG-AMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLEN  150 (343)
T ss_dssp             CEEEEETTCHHHHSSTTHHHHHTCCEEEEECE--ETT-EECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHH
T ss_pred             Cceeccccccceeeecccccccccceeecccc--ccC-ccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHH
Confidence            99987766655432111111222233333221  122 24554433  32      344544444 45666677777  4


Q ss_pred             Ccc---c-cCCCcEEEEeccCcCCCCcc------cccc-ccEEEeCCCccccCCccEEEEEcHHHHhccCCCCCcccccc
Q 043610          228 YPS---A-KNSTGILVADMSSNFCSKPV------DVTR-FGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYK  296 (430)
Q Consensus       228 i~~---~-~~~g~~lvvD~a~s~G~~~i------dl~~-~d~~~~s~~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~  296 (430)
                      +.+   + +++|+++++|+++..+....      +... .+..+.+.+|..+..+.++....++.+.....       +.
T Consensus       151 l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~  223 (343)
T d1m6sa_         151 IKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARK-------AR  223 (343)
T ss_dssp             HHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHH-------HH
T ss_pred             HHHHHHHHHhcCeEEEeccccccccccccccchhhhccccccccccccccccccccccccccHHHHhhhHh-------hC
Confidence            444   3 58999999999987544321      1111 13566666777753334666666665543211       00


Q ss_pred             chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc
Q 043610          297 IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD  376 (430)
Q Consensus       297 ~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~  376 (430)
                      .  .   ..++.+.....++..........    ...+...++..++.+.+.+..+....  .+ ..+ ..+.+.+++.+
T Consensus       224 ~--~---~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~-~~v~~~~~~~~  290 (343)
T d1m6sa_         224 K--M---LGGGMRQAGVLAAAGIIALTKMV----DRLKEDHENARFLALKLKEIGYSVNP--ED-VKT-NMVILRTDNLK  290 (343)
T ss_dssp             H--H---HTCCCSSTHHHHHHHHHHHHHSS----TTHHHHHHHHHHHHHHHHHHTCBCCG--GG-CCS-SEEEEECTTSS
T ss_pred             c--c---cccccchhHHHHHhhhhhhhhhH----HHHHHHHHHHHHhhhHHHHhccCccC--CC-CCc-eEEEEEeCCCc
Confidence            0  0   01122222222222111111111    12223334444555555543333221  11 123 34667776544


Q ss_pred             hhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhhC
Q 043610          377 LEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA  430 (430)
Q Consensus       377 ~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~~  430 (430)
                      ... +|.++|.++||.+.+.  ..+.+||+++..+|+||||+++++|++++++.+
T Consensus       291 ~~a~~l~~~L~~~Gi~v~~~--~~~~iRi~~~~~~t~edid~~v~~l~~v~~~~~  343 (343)
T d1m6sa_         291 VNAHGFIEALRNSGVLANAV--SDTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS  343 (343)
T ss_dssp             SCHHHHHHHHHHHTEECEEE--ETTEEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHCCCEEecC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            444 7999999999987642  134799999999999999999999999999864

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.72  E-value=1.9e-16  Score=154.51  Aligned_cols=291  Identities=10%  Similarity=0.038  Sum_probs=185.2

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..++.++.+++++|.+   .++++ +|||+|+.+++.++ +++||+|++....+.+..  ......| +++.+....+  
T Consensus        32 ~v~~~E~~la~~~g~~---~ai~~-~sgt~Al~~al~al~~~~gdeVi~~~~~~~~~~--~ai~~~g~~pv~~d~~~~--  103 (376)
T d1mdoa_          32 KNQELEAAFCRLTGNQ---YAVAV-SSATAGMHIALMALGIGEGDEVITPSMTWVSTL--NMIVLLGANPVMVDVDRD--  103 (376)
T ss_dssp             HHHHHHHHHHHHHCCS---EEEEE-SCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHH--HHHHHTTCEEEEECBCTT--
T ss_pred             HHHHHHHHHHHHHCcC---eEEEe-CCHHHHHHHHHHHhCCCCCCEEEEecccccccc--cchhccccceeeeccccc--
Confidence            3568889999999986   46665 68999999999998 789999998776665532  2344557 7777777542  


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc--ccccccc--EEEeCCC
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP--VDVTRFG--VIYAGAQ  264 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~~d--~~~~s~~  264 (430)
                       ...+|+++|+  ++++|++|+++|   ..|...|  +|.++ +++|++++.|++|++|...  ..+..+|  ++.+..+
T Consensus       104 -~~~~d~~~l~~~i~~~tkaIi~~h---~~G~~~~~~~i~~i~~~~~i~vIeD~a~a~g~~~~~~~~g~~g~~~~Sf~~~  179 (376)
T d1mdoa_         104 -TLMVTPEHIEAAITPQTKAIIPVH---YAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAI  179 (376)
T ss_dssp             -TCCBCHHHHHHHCCTTEEEECCBC---GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTT
T ss_pred             -ccCCCHHHHHHhcCCCCeEEEEeC---CCCCccchhHHHHHHHhcCceEEeccchhccCeeCCeecccccCccccCCCc
Confidence             2357888898  899999999987   4688888  78876 6899999999999999753  2333344  5667788


Q ss_pred             cccc-CCccEEEEEcHH-HHhccCCCCCc---------cccccc----hhhcCCCCCCccHHHHHHHHHHHHHHHHhcCH
Q 043610          265 KNVG-PSGVTIVIVRKD-LLGNAQDKTPL---------MLDYKI----HDENNSLYNTPPCYCIYMCGLVFEYLLELGGL  329 (430)
Q Consensus       265 K~~g-p~G~g~l~v~~~-~~~~~~~~~p~---------~~~~~~----~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~  329 (430)
                      |+++ .-| |+++.+++ +.+++....-.         ..++..    ....+.. .-.+-  +. +...+..+.   .+
T Consensus       180 K~l~~g~G-G~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n-~~~~~--~~-Aai~~~qL~---~~  251 (376)
T d1mdoa_         180 KNITCAEG-GIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYK-YNLPD--LN-AAIALAQLQ---KL  251 (376)
T ss_dssp             SSSCSSSC-EEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCB-CCCCH--HH-HHHHHHHHH---TH
T ss_pred             CCCCCCCC-CEEEEechhHHHHHHhhcccCCcccccccccccccccccchhcccc-cccch--hh-hhhhhhhhh---hh
Confidence            9996 555 77776544 43432210000         000000    0000110 01111  11 112222232   46


Q ss_pred             HHHHHHHHHHHHHHHHHHHccCCceecCCCCC-CCccceEEEEcCCC--chh-HHHHHHHHHcCCeecCCCC--------
Q 043610          330 NEVEKMNRKKAELLYNVIDGSNGFYKCPVEKS-VRSFMNVPFTLEKS--DLE-AEFVKEAAKEKMVQLKGHR--------  397 (430)
Q Consensus       330 ~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~-~rs~~iv~f~~~~~--~~~-~~~~~~L~~~Gi~~~~g~~--------  397 (430)
                      +...++.++.++++.+.|.+..+..+...... ..+...+++.++..  ... .+|++.|.++||.+...+.        
T Consensus       252 ~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~~~~y~~~~~~~~~  331 (376)
T d1mdoa_         252 DALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYY  331 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHH
T ss_pred             hHHHHHHhhhhhhhhhhcccccccccccccccccccccccccccccccchhhHHHHHHHHHHCCCCeeeECcchhcCHHH
Confidence            78888999999999999997544433322211 12223344444321  112 2699999999987532211        


Q ss_pred             ---------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          398 ---------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       398 ---------------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                                     ....|.+-++.+.+++||++++++|++++
T Consensus       332 ~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i~  375 (376)
T d1mdoa_         332 RERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIA  375 (376)
T ss_dssp             HHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             HhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHh
Confidence                           02348888888899999999999999975

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.70  E-value=2.6e-16  Score=155.96  Aligned_cols=327  Identities=10%  Similarity=-0.037  Sum_probs=187.5

Q ss_pred             CCceeecCC-------CCCCcHHHHHHHHHHhhhcc-CCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEE
Q 043610           69 DRVFNFAAG-------PANLPEKVLLKAQSELYNWR-GSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLF  138 (430)
Q Consensus        69 ~~~~l~~~g-------p~~~~~~V~~a~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~  138 (430)
                      +++++++.|       ..++++.|++++.....+.. ..+++   .....+++   .+.+.+.+.+..+.  ..+..+++
T Consensus        30 ~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~---p~~G~p~l---reaia~~~~~~~~~~~~~~~~~~~  103 (412)
T d1ajsa_          30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYL---PILGLAEF---RTCASRLALGDDSPALQEKRVGGV  103 (412)
T ss_dssp             TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCC---CTTCCHHH---HHHHHHHHHCTTCHHHHTTCEEEE
T ss_pred             CCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCC---CCCCCHHH---HHHHHHHHhccCCcccccccceee
Confidence            345777777       34566888888655443211 11121   11222332   22333333332232  23323444


Q ss_pred             EeCcHHHHHHHH-------HhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-----c
Q 043610          139 LQGGATTQFAAV-------PLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-----Q  205 (430)
Q Consensus       139 ~~~gaT~a~~~~-------~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-----i  205 (430)
                      .+.+++.++..+       +..+++|||+|++.++.+..+.  ...+..| +...+....+ +.+...|.+.++     +
T Consensus       104 ~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~--~~~~~~G~~~v~~~~~~~-~~~~~~d~~~~~~~~~~~  180 (412)
T d1ajsa_         104 QSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHN--GVFTTAGFKDIRSYRYWD-TEKRGLDLQGFLSDLENA  180 (412)
T ss_dssp             EEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHH--HHHHHTTCSCEEEEECEE-TTTTEECHHHHHHHHHHS
T ss_pred             cccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhH--HHHHHcCCeEEEeecccc-cccccccHHHHHHHHHhc
Confidence            445555554433       3334689999999998877653  3455567 6554443221 122235554432     4


Q ss_pred             CCCccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-cc--c-------cc--cccEEEeCCCccc
Q 043610          206 NPDAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-PV--D-------VT--RFGVIYAGAQKNV  267 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-~i--d-------l~--~~d~~~~s~~K~~  267 (430)
                      .+++++++++.++||||.+++  +   |.++ +++|++++.|+++.--.. ..  +       ..  ...+++.+++|.+
T Consensus       181 ~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~  260 (412)
T d1ajsa_         181 PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNF  260 (412)
T ss_dssp             CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTS
T ss_pred             cCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhhcccccccccccccc
Confidence            678999999999999999999  3   4454 589999999998753221 10  0       01  1137788999999


Q ss_pred             cCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH------HHHHhcCHHHHHHHHHHH
Q 043610          268 GPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE------YLLELGGLNEVEKMNRKK  339 (430)
Q Consensus       268 gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~------~l~~~~g~~~v~~~~~~l  339 (430)
                      +.+|  +|++++....++....... .+..   . ......+++...+.++...+.      ...  ..++.++++++++
T Consensus       261 ~~~G~R~G~~~~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~  333 (412)
T d1ajsa_         261 GLYNERVGNLTVVAKEPDSILRVLS-QMQK---I-VRVTWSNPPAQGARIVARTLSDPELFHEWT--GNVKTMADRILSM  333 (412)
T ss_dssp             CCGGGCEEEEEEECSSHHHHHHHHH-HHHH---H-HHTTTSSCCSHHHHHHHHHHHSHHHHHHHH--HHHHHHHHHHHHH
T ss_pred             cCCCCCccccccchhHHHHHHHHHH-HHHH---H-hhccccccchHHHHHHHHHhcCHHHHHHHH--HHHHHHHHHHHHH
Confidence            8777  8888887654433211000 0000   0 011223445555555544432      121  1356778889999


Q ss_pred             HHHHHHHHHccCCce----ecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHH
Q 043610          340 AELLYNVIDGSNGFY----KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAG  414 (430)
Q Consensus       340 ~~~l~~~l~~~~G~~----~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~ed  414 (430)
                      ++.+.++|++ .|..    .++  +  .. +.+++ +   +++.+++++| +++||.+.+|      .||++.+ .++++
T Consensus       334 r~~l~~~L~~-~~~~~~~~~i~--~--~~-G~F~~-~---~ls~~~v~~L~~e~gV~~vpg------~Ri~~ag-~~~~~  396 (412)
T d1ajsa_         334 RSELRARLEA-LKTPGTWNHIT--D--QI-GMFSF-T---GLNPKQVEYLINQKHIYLLPS------GRINMCG-LTTKN  396 (412)
T ss_dssp             HHHHHHHHHH-TTCSSCCHHHH--H--CC-SSEEE-C---CCCHHHHHHHHHTTCEECCTT------SEEEGGG-CCTTT
T ss_pred             HHHHHHHHHH-hCCCCCeeeec--C--CC-eEEEe-c---CCCHHHHHHHHHhCCEEEeCC------CeEEecc-CCHHH
Confidence            9999999986 4432    111  0  11 22332 2   2344566666 6679988775      3999864 45788


Q ss_pred             HHHHHHHHHHHHHh
Q 043610          415 VEKLVAFMKDFQAK  428 (430)
Q Consensus       415 v~~ll~~L~~~~~~  428 (430)
                      |+++.++|++++++
T Consensus       397 i~~~a~aI~~av~~  410 (412)
T d1ajsa_         397 LDYVATSIHEAVTK  410 (412)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999876

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.68  E-value=1.4e-15  Score=149.65  Aligned_cols=347  Identities=13%  Similarity=0.087  Sum_probs=220.8

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHH-HHHHHHHHHHhCCCCCcE-EEEEeCcHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSII-EKAESDLRALLNIPQEYS-VLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~-~~~r~~la~l~g~~~~~~-vv~~~~gaT~  145 (430)
                      +.+.+++.+.--.+++.|++++...+.+-...|... ...+.+-++.+.+ ..+.+..+++||+++++. +-+-.-|++.
T Consensus        30 q~~~l~LIaSEN~~S~~v~~algS~l~nkYaeG~pg-~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~SGs~  108 (470)
T d1rv3a_          30 QRVGLELIASENFASRAVLEALGSCLNNKYSLGYPG-QRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSP  108 (470)
T ss_dssp             HHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHH
T ss_pred             HHcCceEecCCCcCCHHHHHHhcchhcccccCCCCC-ccccCCchhHHHHHHHHHHHHHHHhCCChhhccccccccCCcc
Confidence            356788899998999999999998886533333311 1233344444444 455678889999974322 3344568999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeC---ChhHHHH------HHHHHHhCCceEEecCCCCcCCCCCCccccc---cCCCccEEE
Q 043610          146 QFAAVPLNLCTPNDPVDYIVT---GSWGDKA------FKEAQKFCNPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLH  213 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~---g~~~~~~------~~~a~~~g~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~  213 (430)
                      |+.+++.++++|||+|+.+..   |+.++..      .....+.-+....+++.  +.+ .+|.|+++   ...++++|+
T Consensus       109 An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~--~~~-~IDyd~l~~~a~~~kPklIi  185 (470)
T d1rv3a_         109 ANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP--DTG-YIDYDRLEENARLFHPKLII  185 (470)
T ss_dssp             HHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT--TTC-SBCHHHHHHHHHHHCCSEEE
T ss_pred             HHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEec--ccC-cccHHHHHHHHHhhCcceEe
Confidence            999999999999999998753   3433310      00000111333444443  233 58998887   345789888


Q ss_pred             EeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCC-----CccccccccEEEeCCCccc-cCCccEEEEEcHHHHhc
Q 043610          214 ICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCS-----KPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGN  284 (430)
Q Consensus       214 i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~-----~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~  284 (430)
                      +-...  .-..+|  ++.++ .+.|+++++|++|-.|-     .|-.+...|+++++.||.| ||.| |+++.+++.-..
T Consensus       186 ~G~S~--y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~aDvvt~tTHKtlrGPrg-GiI~~~~~~~~~  262 (470)
T d1rv3a_         186 AGTSC--YSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSV  262 (470)
T ss_dssp             ECCSS--CCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEEECSBCC-
T ss_pred             echhh--ccccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChhheeeeeeeehhhhccCCcc-eEEEEccccccc
Confidence            86432  234455  56666 58899999999996543     4434555599999999999 8999 888887642110


Q ss_pred             cCCCC--Cccccccchhhc---CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCC
Q 043610          285 AQDKT--PLMLDYKIHDEN---NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVE  359 (430)
Q Consensus       285 ~~~~~--p~~~~~~~~~~~---~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~  359 (430)
                       .+..  ....++....++   ....|.|-...+++++.+|.+.... .+.+-.+...+.++.|.+.|.+ .|+.++. .
T Consensus       263 -~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~-~fk~Ya~qvv~NAk~La~~L~~-~G~~v~~-g  338 (470)
T d1rv3a_         263 -DPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTP-EFKEYQRQVVANCRALSAALVE-LGYKIVT-G  338 (470)
T ss_dssp             -------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-G
T ss_pred             -cccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHh-CCceecc-C
Confidence             0000  000111111111   1123566677888888888765432 3567778888888899999986 7999874 1


Q ss_pred             CCCCccceEEEEcCCCchhH-HHHHHHHHcCCee----cCCCCC---CCeeEEeecC----CCCHHHHHHHHHHHHHHHH
Q 043610          360 KSVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQ----LKGHRS---VGGMRASIYN----AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       360 ~~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~----~~g~~~---~g~iRis~~~----~~t~edv~~ll~~L~~~~~  427 (430)
                      . ..+ +.+.+.+.+.+.+. ++.+.|.+.||.+    .|+.++   ..+|||+...    -..++|++++.+.|.+.+.
T Consensus       339 g-Tdn-Hlvlvdl~~~g~~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~dm~~iA~~I~~~l~  416 (470)
T d1rv3a_         339 G-SDN-HLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIE  416 (470)
T ss_dssp             S-CSS-SEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             C-CCC-ceEEEeecccCCcHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            1 223 45666665434455 5666788899985    344322   3579999654    3578999999999988663

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.68  E-value=6.4e-16  Score=153.18  Aligned_cols=273  Identities=13%  Similarity=0.066  Sum_probs=167.7

Q ss_pred             EEEEeCcHHHHHHHHH--hhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-----cCC
Q 043610          136 VLFLQGGATTQFAAVP--LNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-----QNP  207 (430)
Q Consensus       136 vv~~~~gaT~a~~~~~--~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-----i~~  207 (430)
                      +.+.+.+++.++..++  .....|||+|++.++.+..+..  .++..| +++.++...+  .+..++.+.+.     ..+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~--~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  175 (412)
T d1yaaa_         100 ISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA--IFENQGLKTATYPYWAN--ETKSLDLNGFLNAIQKAPE  175 (412)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH--HHHTTTCCEEEEECEET--TTTEECHHHHHHHHHHSCT
T ss_pred             eEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHH--HHHHcCCceeccccccc--ccccccchhhhcccccCCC
Confidence            3333344455444332  3345899999999888776543  455667 8888886542  12234444433     346


Q ss_pred             CccEEEEeecCCCccccCC--C---Cccc-cCCCcEEEEeccCcCCCC-c-----c---c----ccccc--EEEeCCCcc
Q 043610          208 DAKYLHICANETIHGVEFK--E---YPSA-KNSTGILVADMSSNFCSK-P-----V---D----VTRFG--VIYAGAQKN  266 (430)
Q Consensus       208 ~~~lv~i~~~~t~tG~~~p--e---i~~~-~~~g~~lvvD~a~s~G~~-~-----i---d----l~~~d--~~~~s~~K~  266 (430)
                      ++++++++.++||||..++  +   |.++ ++++++++.|+++..-.. .     .   .    .+..+  +++.|++|.
T Consensus       176 ~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~  255 (412)
T d1yaaa_         176 GSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKN  255 (412)
T ss_dssp             TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTT
T ss_pred             ceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhccccCCCeEEEEecCCc
Confidence            6789999999999999999  3   4444 689999999998752221 1     0   0    01112  788999999


Q ss_pred             ccCCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHHH
Q 043610          267 VGPSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKKA  340 (430)
Q Consensus       267 ~gp~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l~  340 (430)
                      ++.+|  +|++++.++.++.+..... .++.............++..++.++..+++.-  .+  ...++.+++++++.+
T Consensus       256 ~~~~G~RiG~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r  334 (412)
T d1yaaa_         256 AGMYGERVGCFHLALTKQAQNKTIKP-AVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMR  334 (412)
T ss_dssp             SCCGGGCEEEEEEECCSCTTHHHHHH-HHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCcCceEEEEEchhhhhhHHHHHH-HHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence            99889  9999998765443211000 00000000011223456666666666655321  00  113677888889999


Q ss_pred             HHHHHHHHccCCce----ecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610          341 ELLYNVIDGSNGFY----KCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       341 ~~l~~~l~~~~G~~----~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~edv  415 (430)
                      +.+.+.|++ .|..    .+.  +  .. +.+++ +   +++.+++++| +++||.+.+|      .|||+++ .+++.|
T Consensus       335 ~~l~~~L~~-~g~~~~~~~~~--~--~g-G~F~~-~---~ls~e~~~~L~~e~~V~~~~g------~Ris~~g-~~~~~i  397 (412)
T d1yaaa_         335 HALRDHLVK-LGTPGNWDHIV--N--QC-GMFSF-T---GLTPQMVKRLEETHAVYLVAS------GRASIAG-LNQGNV  397 (412)
T ss_dssp             HHHHHHHHH-HTCSSCCTHHH--H--CC-SSEEE-C---CCCHHHHHHHHHHHCEECCTT------SEEEGGG-CCTTTH
T ss_pred             HHHHHHHHH-hCCCCCCceeC--C--Cc-eEEEe-c---CcCHHHHHHHHHhCCEEECCC------CEEEecc-CCHHHH
Confidence            999999987 3322    111  1  12 22332 2   2345678777 5679988765      5899864 457789


Q ss_pred             HHHHHHHHHHHHhhC
Q 043610          416 EKLVAFMKDFQAKHA  430 (430)
Q Consensus       416 ~~ll~~L~~~~~~~~  430 (430)
                      +++.++|.++++.++
T Consensus       398 ~~l~~ai~~v~k~~~  412 (412)
T d1yaaa_         398 EYVAKAIDEVVRFYA  412 (412)
T ss_dssp             HHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhhC
Confidence            999999999988764

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=1.8e-16  Score=156.22  Aligned_cols=324  Identities=13%  Similarity=0.030  Sum_probs=190.7

Q ss_pred             CCceeecCC----C---CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Q 043610           69 DRVFNFAAG----P---ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI--PQEYSVLFL  139 (430)
Q Consensus        69 ~~~~l~~~g----p---~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~--~~~~~vv~~  139 (430)
                      ++.++++.|    +   .+.++.|++++.+...+....+..   .....+++   .+.+.+.+.+..+.  +++..+.++
T Consensus        26 ~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~---p~~G~~~l---R~aia~~~~~~~~~~~~~~~~~~~~   99 (396)
T d2q7wa1          26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYL---GIDGIPEF---GRCTQELLFGKGSALINDKRARTAQ   99 (396)
T ss_dssp             --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCC---CTTCCHHH---HHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred             CCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCC---CCcCCHHH---HHHHHHHHHhhcCCcccccceeeec
Confidence            345788877    1   356689999987766542222221   12222333   22333333333332  222244445


Q ss_pred             eCcHHHHHHHHHh--hcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-----cCCCccE
Q 043610          140 QGGATTQFAAVPL--NLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-----QNPDAKY  211 (430)
Q Consensus       140 ~~gaT~a~~~~~~--sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-----i~~~~~l  211 (430)
                      +.+++.+....+.  ..+.+||.|++.++++..+.  ..++..| +++.++...+  .+...+..++.     ..+++++
T Consensus       100 ~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~--~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  175 (396)
T d2q7wa1         100 TPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK--SVFNSAGLEVREYAYYDA--ENHTLDFDALINSLNEAQAGDVV  175 (396)
T ss_dssp             ESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHH--HHHHHTTCEEEEEECEET--TTTEECHHHHHHHHTTCCTTCEE
T ss_pred             cchHHHHHHHHHHHHhhcccceEEEEecCCCccch--HHHHHcCCeeEecccccc--cccccccchHHHHHHHhccCcEE
Confidence            5666666654443  33589999999888877654  3455667 7777776542  12123333322     4677889


Q ss_pred             EEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCCc----c-c---c-ccc--cEEEeCCCccccCCc--c
Q 043610          212 LHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSKP----V-D---V-TRF--GVIYAGAQKNVGPSG--V  272 (430)
Q Consensus       212 v~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~~----i-d---l-~~~--d~~~~s~~K~~gp~G--~  272 (430)
                      +++++++||||..++     +|.++ ++++++++.|++++.-...    . -   . +..  .+++.++.|.++.+|  +
T Consensus       176 i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~  255 (396)
T d2q7wa1         176 LFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERV  255 (396)
T ss_dssp             EEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCC
T ss_pred             EEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccccccccccccccCCCc
Confidence            999999999999999     34554 5899999999987632221    0 0   1 111  278889999999888  9


Q ss_pred             EEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH------HHHHhcCHHHHHHHHHHHHHHHHHH
Q 043610          273 TIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE------YLLELGGLNEVEKMNRKKAELLYNV  346 (430)
Q Consensus       273 g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~------~l~~~~g~~~v~~~~~~l~~~l~~~  346 (430)
                      |++++.+..++.........     .........+++...+.++...+.      ...  ..++.++++++++++.+.++
T Consensus       256 G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~r~~l~~~  328 (396)
T d2q7wa1         256 GACTLVAADSETVDRAFSQM-----KAAIRANYSNPPAHGASVVATILSNDALRAIWE--QELTDMRQRIQRMRQLFVNT  328 (396)
T ss_dssp             EEEEEECSSHHHHHHHHHHH-----HHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHH--HHHHHC-CHHHHHHHHHHHH
T ss_pred             cccccchhHHHHHHHhhhhh-----hhhhhccccCCCHHHHHHHHHHhcCchhHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence            99998876554321100000     000112224555666665554442      111  24677888999999999999


Q ss_pred             HHccCCcee----cCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHH
Q 043610          347 IDGSNGFYK----CPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAF  421 (430)
Q Consensus       347 l~~~~G~~~----~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~  421 (430)
                      |++ .|...    +.  +  .. +.+++ ++   ++.+++++| +++||.+.+|.      ||++.+ .++++|+++.++
T Consensus       329 L~~-~~~~~~~~~~~--~--~~-G~F~~-~~---l~~e~~~~L~~e~gV~~~~g~------Ri~~a~-l~~~~i~~~~~a  391 (396)
T d2q7wa1         329 LQE-KGANRDFSFII--K--QN-GMFSF-SG---LTKEQVLRLREEFGVYAVASG------RVNVAG-MTPDNMAPLCEA  391 (396)
T ss_dssp             HHH-TTCCSCCTHHH--H--CC-SSEEE-CC---CCHHHHHHHHHHHCEECCTTC------EEEGGG-CCTTTHHHHHHH
T ss_pred             HHH-hCCCCCcceec--C--CC-eEEEe-eC---CCHHHHHHHHHhCCEEECCCC------EEEecC-CCHHHHHHHHHH
Confidence            987 44321    11  1  12 22332 22   345677777 55799887652      899874 357789999999


Q ss_pred             HHHHH
Q 043610          422 MKDFQ  426 (430)
Q Consensus       422 L~~~~  426 (430)
                      |++++
T Consensus       392 i~~v~  396 (396)
T d2q7wa1         392 IVAVL  396 (396)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            98763

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.67  E-value=1.4e-15  Score=149.21  Aligned_cols=348  Identities=13%  Similarity=0.099  Sum_probs=210.2

Q ss_pred             CCCceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHH-HHHHHHHHHHhCCCCCcE-EEEEeCcHHH
Q 043610           68 EDRVFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSII-EKAESDLRALLNIPQEYS-VLFLQGGATT  145 (430)
Q Consensus        68 ~~~~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~-~~~r~~la~l~g~~~~~~-vv~~~~gaT~  145 (430)
                      +.+.+++.+.--.+++.|++++...+.+-...|... ...+.+-++.+.+ .-+.+..+++||++..+. |=+-.-|++.
T Consensus        26 q~~~l~LiaSEN~~S~~v~~algS~l~nkYaeG~pg-~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~w~vNVqp~SGs~  104 (463)
T d2a7va1          26 QCRGLELIASENFCSRAALEALGSCLNNKYSEGYPG-KRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSP  104 (463)
T ss_dssp             HHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHH
T ss_pred             HhcCeeEeccCCcCCHHHHHHhcchhcccccCCCCC-ccccCCchhHHHHHHHHHHHHHHHhCCCchhccCCccccccHH
Confidence            345688889998999999999988886533334311 1222233343333 345788899999985421 2233568999


Q ss_pred             HHHHHHhhcCCCCCcEEEEeC---ChhHHHHHHHHHH---hC---CceEEecCCCCcCCCCCCccccc---cCCCccEEE
Q 043610          146 QFAAVPLNLCTPNDPVDYIVT---GSWGDKAFKEAQK---FC---NPQVIWSGKAEKYTKIPNFDALE---QNPDAKYLH  213 (430)
Q Consensus       146 a~~~~~~sl~~~gd~vl~~~~---g~~~~~~~~~a~~---~g---~~~~v~~~~~~~~g~~~d~~~l~---i~~~~~lv~  213 (430)
                      |+.+++.++++|||+|+.+..   |+.++.......+   .|   +...+.+++  +. ..+|.++++   ...++|+|+
T Consensus       105 An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~--~~-~~IDyd~~~~~a~~~kPklIi  181 (463)
T d2a7va1         105 ANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP--KT-GLIDYNQLALTARLFRPRLII  181 (463)
T ss_dssp             HHHHHHHHHCCSCEECCC-------------------------------CCBCT--TT-CSBCHHHHHHHHHHHCCSEEE
T ss_pred             HHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccC--CC-CcCcHHHHHHHHhhcCCceEE
Confidence            999999999999999987643   3333321110011   12   122222221  22 357888887   345789888


Q ss_pred             EeecCCCccccCC--CCccc-cCCCcEEEEeccCcCC-----CCccccccccEEEeCCCccc-cCCccEEEEEcHHHHhc
Q 043610          214 ICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFC-----SKPVDVTRFGVIYAGAQKNV-GPSGVTIVIVRKDLLGN  284 (430)
Q Consensus       214 i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G-----~~~idl~~~d~~~~s~~K~~-gp~G~g~l~v~~~~~~~  284 (430)
                      +-....  -..+|  ++.++ .+.|+++++|++|-.|     ..|-.+.-.|+++++.||.| ||.| |+++.+++....
T Consensus       182 ~G~S~y--~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~~aDvvt~tTHKTlrGPrg-GiIl~~~~~~~~  258 (463)
T d2a7va1         182 AGTSAY--ARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKAV  258 (463)
T ss_dssp             ECCSSC--CSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCSC-EEEEEECSEEEE
T ss_pred             eccccc--ccccCHHHHHHHhhcccceEEechhhhhHHhhhhhhcChhhhhhhhhchhhhhhcCCCc-eEEEEccccccc
Confidence            865333  34455  57776 5789999999998654     34444555699999999999 8999 888887643111


Q ss_pred             cCCCC-Cccccccchhhc---CCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          285 AQDKT-PLMLDYKIHDEN---NSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       285 ~~~~~-p~~~~~~~~~~~---~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      ..+.. ....++....++   ....|.|-...+++.+.+|.+..+. .+++-.+...+.++.|.+.|.+ .|+.++. . 
T Consensus       259 ~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~-~fk~Ya~qVv~NAk~La~~L~~-~G~~vv~-g-  334 (463)
T d2a7va1         259 DPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP-MFREYSLQVLKNARAMADALLE-RGYSLVS-G-  334 (463)
T ss_dssp             ETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHH-TTCEEGG-G-
T ss_pred             ccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHh-CCCeeec-C-
Confidence            00000 000011110111   1123566677788888888765432 3667778888888899999986 7999874 1 


Q ss_pred             CCCccceEEEEcCCCchhH-HHHHHHHHcCCee----cCCCC---CCCeeEEeecC----CCCHHHHHHHHHHHHHHHH
Q 043610          361 SVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQ----LKGHR---SVGGMRASIYN----AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~----~~g~~---~~g~iRis~~~----~~t~edv~~ll~~L~~~~~  427 (430)
                      ...+ +.+.+.+.+.+.+. +..+.|.+.||.+    .|+.+   ..++|||+...    -..++|++++.+.|.+.+.
T Consensus       335 gTdn-Hlvlvdl~~~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         335 GTDN-HLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             SCSS-SEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCC-ceeeeeccccCCCHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            1223 45667775444455 5666789999985    33433   24579999654    3468999999999887653

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.64  E-value=1.1e-15  Score=150.25  Aligned_cols=326  Identities=13%  Similarity=0.032  Sum_probs=187.4

Q ss_pred             CCceeecCCC-------CCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEe
Q 043610           69 DRVFNFAAGP-------ANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIP-QEYSVLFLQ  140 (430)
Q Consensus        69 ~~~~l~~~gp-------~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~-~~~~vv~~~  140 (430)
                      ++.+|++.|.       .++++.|.+++++-..+....+++   .....++++   +.+.+.+.+.-+.. ....+++++
T Consensus        26 ~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~---p~~G~~~lr---~aia~~~~~~~~~~~~~~~~~~~~   99 (394)
T d2ay1a_          26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYA---GLSGEPEFQ---KAMGELILGDGLKSETTATLATVG   99 (394)
T ss_dssp             TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCC---CSSCCHHHH---HHHHHHHHGGGCCGGGEEEEEEEH
T ss_pred             CCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCC---CCCCCHHHH---HHHHHHHhccccccccccceeccC
Confidence            3457887772       356689999988776543222322   222234333   34444444333432 121344433


Q ss_pred             CcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-----cCCCccEEEE
Q 043610          141 GGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-----QNPDAKYLHI  214 (430)
Q Consensus       141 ~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-----i~~~~~lv~i  214 (430)
                      +++..++.+.+..++.+||.|++.++++..+.  ..++..| +++.++...+  .+...+.++++     ..++++++++
T Consensus       100 ~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~--~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~  175 (394)
T d2ay1a_         100 GTGALRQALELARMANPDLRVFVSDPTWPNHV--SIMNFMGLPVQTYRYFDA--ETRGVDFEGMKADLAAAKKGDMVLLH  175 (394)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEESCCHHHH--HHHHHHTCCEEEEECEET--TTTEECHHHHHHHHHTCCTTCEEEEE
T ss_pred             chHHHHHHHHHhhhcCCceEEEEecccccchH--HHHHHcCCEEEEecccch--hcccccchhHHHHHhhcccCcEEEEe
Confidence            33344455555666789999999888776653  3456677 8877776432  12223333322     4567888999


Q ss_pred             eecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCCc------c---ccccc-c-EEEeCCCccccCCc--cEEE
Q 043610          215 CANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSKP------V---DVTRF-G-VIYAGAQKNVGPSG--VTIV  275 (430)
Q Consensus       215 ~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~~------i---dl~~~-d-~~~~s~~K~~gp~G--~g~l  275 (430)
                      +.++||||..++     +|.++ ++++++++.|+++..-...      +   ...+. . +++.+++|.++.+|  +|++
T Consensus       176 ~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~  255 (394)
T d2ay1a_         176 GCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCL  255 (394)
T ss_dssp             SSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEE
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhcccccccccccccccCCcccccch
Confidence            999999999999     34454 5899999999987533221      0   01111 2 67788999998777  8888


Q ss_pred             EEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHH--HHHH--hcCHHHHHHHHHHHHHHHHHHHHccC
Q 043610          276 IVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFE--YLLE--LGGLNEVEKMNRKKAELLYNVIDGSN  351 (430)
Q Consensus       276 ~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~--~l~~--~~g~~~v~~~~~~l~~~l~~~l~~~~  351 (430)
                      .+....++.....    ......... .....++...+..+...+.  .+.+  ...++.+++++.++++.+.++|.+..
T Consensus       256 ~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~  330 (394)
T d2ay1a_         256 LALCADAATRELA----QGAMAFLNR-QTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLS  330 (394)
T ss_dssp             EEECSSHHHHHHH----HHHHHHHHH-TTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhchhHHHHHHHh----hhhhHhhhc-ccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8876554432110    000000001 1112333333333333221  1100  12356788888999999999998632


Q ss_pred             C---ceecCCCCCCCccceEEEEcCCCchhHHHHHHH-HHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHH
Q 043610          352 G---FYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEA-AKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF  425 (430)
Q Consensus       352 G---~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L-~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~  425 (430)
                      +   +..+.  +  .. +.+++ ++   ++.+++++| +++||...+|      .|||+.+ .++++|+++.++|.++
T Consensus       331 ~~~~~~~~~--~--~~-G~F~~-~~---ls~~~~~~L~~~~~V~~~~g------~Ri~~a~-l~~~~i~~l~~ai~~v  392 (394)
T d2ay1a_         331 GSDRFGFVA--E--HR-GMFSR-LG---ATPEQVKRIKEEFGIYMVGD------SRINIAG-LNDNTIPILARAIIEV  392 (394)
T ss_dssp             TSSTTTHHH--H--CC-SSEEE-CC---CCHHHHHHHHHHHCEECCTT------CEEEGGG-CCTTTHHHHHHHHHHH
T ss_pred             CCCceeeEC--C--Cc-eeEEe-cC---cCHHHHHHHHHhCCEEecCC------CEEEecC-CCHHHHHHHHHHHHHh
Confidence            1   22211  1  12 22432 22   345677887 5679988875      5899864 5678999999999875

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.63  E-value=1.8e-15  Score=147.61  Aligned_cols=278  Identities=11%  Similarity=0.022  Sum_probs=159.1

Q ss_pred             HHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEe--CChhHHHHHHHHHHhCCceEEecCCCCcCC
Q 043610          118 EKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIV--TGSWGDKAFKEAQKFCNPQVIWSGKAEKYT  195 (430)
Q Consensus       118 ~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~--~g~~~~~~~~~a~~~g~~~~v~~~~~~~~g  195 (430)
                      +++++..++.++..+..++++ ++|+++|+.+++.++. +||.|+++.  +.|.+.  .+.++..| ..++..       
T Consensus        53 ~~l~~~~~~~~~~~~~e~~~~-~~~~~~a~~~~l~al~-~~~~vi~~~~~~~~~~~--~~~~~l~g-~~~v~~-------  120 (366)
T d2aeua1          53 EKVNEYGLKHLGGDENDKCVG-FNRTSSAILATILALK-PKKVIHYLPELPGHPSI--ERSCKIVN-AKYFES-------  120 (366)
T ss_dssp             HHHHHHHHHHHTCCTTEEEEE-ESSHHHHHHHHHHHHC-CSEEEEECSSSSCCTHH--HHHHHHTT-CEEEEE-------
T ss_pred             HHHHHHHHHHccCCCccEEEE-eCCHHHHHHHHHHHhC-CCCEEEEecCCCcchhH--HHHHHhcC-CeEECC-------
Confidence            466677777788765424554 5889999999998874 677766543  234432  22333345 333332       


Q ss_pred             CCCCccccc--cCCCccEEEEeecCCCccc-cCC--CCccc-cCCCcEEEEeccCcCCCCccc-----c-ccccEEEeCC
Q 043610          196 KIPNFDALE--QNPDAKYLHICANETIHGV-EFK--EYPSA-KNSTGILVADMSSNFCSKPVD-----V-TRFGVIYAGA  263 (430)
Q Consensus       196 ~~~d~~~l~--i~~~~~lv~i~~~~t~tG~-~~p--ei~~~-~~~g~~lvvD~a~s~G~~~id-----l-~~~d~~~~s~  263 (430)
                        .|+++++  ++++|++|+++++.|+++. ..+  +|+++ +++|+++++|++|+.+.....     + ...|++++|.
T Consensus       121 --~d~e~l~~~i~~~tk~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~di~~~S~  198 (366)
T d2aeua1         121 --DKVGEILNKIDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTST  198 (366)
T ss_dssp             --SCHHHHHTTCCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEET
T ss_pred             --CCHHHHHHhcCCCceEEEEEecCCCCcCCHHHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcCceEEEecc
Confidence              2567776  8999999999998786543 334  67776 689999999999875432111     1 1247999999


Q ss_pred             CccccCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHH---HH--
Q 043610          264 QKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMN---RK--  338 (430)
Q Consensus       264 ~K~~gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~---~~--  338 (430)
                      +|+++..+.|+++.++++++.+...          ..  ....+++.+.++++..+|+.+    ....+.++.   ++  
T Consensus       199 sK~~~g~~~G~i~~~~~~i~~~~~~----------~~--~~g~~~~~~~~~a~~~aL~tl----~~~r~~~~~~~~~~i~  262 (366)
T d2aeua1         199 DKLMEGPRGGLLAGKKELVDKIYIE----------GT--KFGLEAQPPLLAGIYRALKNF----NLERIRKAFERAKNFD  262 (366)
T ss_dssp             TSSSSSCSCEEEEEEHHHHHHHHHH----------HH--TTTCBCCHHHHHHHHHHHHHC----CHHHHHHHHHHHHHCC
T ss_pred             cccccccceeEEEecHHHHHHHHHH----------Hh--cccccCCHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHH
Confidence            9999644679999999998875320          00  122345566777777777632    223332222   22  


Q ss_pred             --HHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCc-----hhHHHHHHH-HHcCCeecCCCCC---CCeeEEeec
Q 043610          339 --KAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSD-----LEAEFVKEA-AKEKMVQLKGHRS---VGGMRASIY  407 (430)
Q Consensus       339 --l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~-----~~~~~~~~L-~~~Gi~~~~g~~~---~g~iRis~~  407 (430)
                        +.+.+...+....++......+ ... .-+.....+..     .+.+++.+| ++.||.+.+|...   .+.+|||+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~a~~Ll~~~gV~~ip~~~~p~~~~~lRis~~  340 (366)
T d2aeua1         263 LSKIEKLNKELKAIDDNINIVYER-TPT-GFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLT  340 (366)
T ss_dssp             CHHHHHHHHHHTTTCTTEEEEEEE-CSS-EEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETT
T ss_pred             HHHHhhhhccccccccccCccccc-Ccc-chhccCCCcceeecccCHHHHHHHHHHhCCEEEEECCCCCCCCCEEEEecc
Confidence              2222222222212221111000 011 11111222110     122577766 5569998776432   347999998


Q ss_pred             CCCCHH-HHHHHHHHHHHHHH
Q 043610          408 NAMPLA-GVEKLVAFMKDFQA  427 (430)
Q Consensus       408 ~~~t~e-dv~~ll~~L~~~~~  427 (430)
                      ..++++ +.+.++++|.+.++
T Consensus       341 ~~~~~~i~~d~l~~ai~~~lK  361 (366)
T d2aeua1         341 SRDAERIDDNYIIKAIVESIK  361 (366)
T ss_dssp             SGGGGGSCHHHHHHHHHHHHH
T ss_pred             ccchhhCCHHHHHHHHHHHHH
Confidence            544333 45666666655443

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=4.4e-16  Score=153.50  Aligned_cols=321  Identities=13%  Similarity=-0.016  Sum_probs=184.9

Q ss_pred             CCceeecCC-------CCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCC------CCCcE
Q 043610           69 DRVFNFAAG-------PANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNI------PQEYS  135 (430)
Q Consensus        69 ~~~~l~~~g-------p~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~------~~~~~  135 (430)
                      ++.++++.|       ..|.++.|++|......+  ..+...|......+       ++|+.+++++.-      +++ +
T Consensus        26 ~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~--~~~~~~Y~p~~G~~-------~lR~aia~~~~~~~~~~~~~~-~   95 (397)
T d3tata_          26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQ--PHGASLYLPMEGLN-------CYRHAIAPLLFGADHPVLKQQ-R   95 (397)
T ss_dssp             SSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTS--CCSSBCCCCTTCCH-------HHHHHHHHHHTCSSCHHHHTT-C
T ss_pred             CCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhC--cccCCCCCCcccCH-------HHHHHHHHHHhhccCCcCCcC-c
Confidence            345777766       245678888886543221  11111121222222       455666665542      233 4


Q ss_pred             EEEEeCcHHH----HHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc-----c
Q 043610          136 VLFLQGGATT----QFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE-----Q  205 (430)
Q Consensus       136 vv~~~~gaT~----a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~-----i  205 (430)
                      ++.+ .+++.    ++.+++..++.|||+|++.++++.++.  ..++..| +++.++...+  .+..++.+++.     .
T Consensus        96 i~~~-~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~--~~~~~~G~~~~~v~~~~~--~~~~~~~~~~~~~~~~~  170 (397)
T d3tata_          96 VATI-QTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHV--AIFAGAGFEVSTYPWYDE--ATNGVRFNDLLATLKTL  170 (397)
T ss_dssp             EEEC-CBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHH--HHHHTTTCCCEECCCCCT--TTSSCCHHHHHHHHTTC
T ss_pred             EEEe-cCchhHHHHHHHHHHhhhcCCCCcceecccCccccH--HHHHHcCCEEEEEecchh--hccccchHHHHHHhhhc
Confidence            5443 33333    244555556789999998888777654  3456677 8888887543  22234554432     3


Q ss_pred             CCCccEEEEeecCCCccccCC-----CCccc-cCCCcEEEEeccCcCCCCcc-----cc----cccc--EEEeCCCcccc
Q 043610          206 NPDAKYLHICANETIHGVEFK-----EYPSA-KNSTGILVADMSSNFCSKPV-----DV----TRFG--VIYAGAQKNVG  268 (430)
Q Consensus       206 ~~~~~lv~i~~~~t~tG~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~~i-----dl----~~~d--~~~~s~~K~~g  268 (430)
                      .++++++++++++||||..++     +|.++ ++++++++.|.++..-...-     .+    ...+  +++.|++|.++
T Consensus       171 ~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~  250 (397)
T d3tata_         171 PARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFS  250 (397)
T ss_dssp             CSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECBCCHHHHT
T ss_pred             ccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEecCccccc
Confidence            567889999999999999999     34454 68999999999976332210     01    1112  78899999999


Q ss_pred             CCc--cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHH--HH--hcCHHHHHHHHHHHHHH
Q 043610          269 PSG--VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYL--LE--LGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       269 p~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l--~~--~~g~~~v~~~~~~l~~~  342 (430)
                      ++|  +|++++.+..++....... ..   . .........++...+.++...+..-  ..  ...++.++++++++++.
T Consensus       251 ~~G~RiG~~~~~~~~~~~~~~~~~-~~---~-~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  325 (397)
T d3tata_         251 LYGERVGGLSVMCEDAEAAGRVLG-QL---K-ATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQE  325 (397)
T ss_dssp             BTTTCCBCCEEECSSTTHHHHHHH-HH---H-HHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCccccccccchhHHHHHHHHHH-HH---H-HHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888  7998887655443211000 00   0 0011122344555555555444210  00  11245566777777777


Q ss_pred             HHHHHHccC---CceecCCCCCCCccceEEEEcCCCchhHHHHHHHH-HcCCeecCCCCCCCeeEEeecCCCCHHHHHHH
Q 043610          343 LYNVIDGSN---GFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAA-KEKMVQLKGHRSVGGMRASIYNAMPLAGVEKL  418 (430)
Q Consensus       343 l~~~l~~~~---G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~-~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~l  418 (430)
                      +.+.|.+..   ++..++   + .. +.+. .++   ++.+++++|. ++||.+.+|      .|||+.+ .++++|+++
T Consensus       326 l~~~L~~~~~~~~~~~~~---~-~~-G~F~-~~~---ls~e~~~~L~~e~~V~l~~g------~Ri~~a~-~~~~~i~~~  389 (397)
T d3tata_         326 LVKVLSTEMPERNFDYLL---N-QR-GMFS-YTG---LSAAQVDRLREEFGVYLIAS------GRMCVAG-LNTANVQRV  389 (397)
T ss_dssp             HHHTTTTTCTTSCTTHHH---H-CC-SSBC-CCC---CCHHHHHHHTTTTCEECCSS------SCCBTTS-CCTTTHHHH
T ss_pred             HHHHHHHhCCCCceEEEc---C-CC-ceEE-ecC---cCHHHHHHHHHhCCEEeCCC------CEEEecc-CCHHHHHHH
Confidence            777776521   122221   0 11 1121 122   3456777774 569988775      4899764 568889999


Q ss_pred             HHHHHHH
Q 043610          419 VAFMKDF  425 (430)
Q Consensus       419 l~~L~~~  425 (430)
                      .++|.++
T Consensus       390 ~~ai~~v  396 (397)
T d3tata_         390 AKAFAAV  396 (397)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999876

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.60  E-value=4.9e-14  Score=138.10  Aligned_cols=292  Identities=12%  Similarity=0.047  Sum_probs=186.4

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+++.++.+++++|.+   .++++ +|||.|+.+++.++ +++||+|++....+.+..  ......| +++.+...+   
T Consensus        35 ~v~~fE~~~a~~~g~~---~~v~~-~SGt~Al~lal~~l~~~~gdeVi~p~~t~~a~~--~ai~~~g~~p~~~d~~~---  105 (384)
T d1b9ha_          35 EVNSFEREFAAHHGAA---HALAV-TNGTHALELALQVMGVGPGTEVIVPAFTFISSS--QAAQRLGAVTVPVDVDA---  105 (384)
T ss_dssp             HHHHHHHHHHHHTTCS---EEEEE-SCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHH--HHHHHTTCEEEEECBCT---
T ss_pred             HHHHHHHHHHHHHCcC---eEEEe-CCHHHHHHHHHHHcCCCCCCEEEEecccccccc--ccccccccccccccccc---
Confidence            3567889999999998   46665 78999999999987 689999998776665543  3455667 777777653   


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCcc-----ccccccEEEeCC
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKPV-----DVTRFGVIYAGA  263 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~i-----dl~~~d~~~~s~  263 (430)
                      ....+|++.++  ++++|++|+++|   ..|...+  +|.++ +++++.++.|++|++|...-     .+.++.++.++.
T Consensus       106 ~~~~~d~~~~~~~i~~~tk~i~~~~---~~g~~~d~~~i~~~~~~~~i~lieD~a~a~ga~~~g~~~g~~g~~~~~Sf~~  182 (384)
T d1b9ha_         106 ATYNLDPEAVAAAVTPRTKVIMPVH---MAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQN  182 (384)
T ss_dssp             TTCCBCHHHHHHHCCTTEEEECCBC---GGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCT
T ss_pred             cccccchhhhccccccccccccccc---ccccccccccchhhhhhhhhhhhhhhceecccccCCEecCcccccceecccc
Confidence            23357888887  789999987764   4566666  66665 68899999999999998531     122334677888


Q ss_pred             Ccccc-CCccEEEEEc-HHHHhccCCC-------CCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHH
Q 043610          264 QKNVG-PSGVTIVIVR-KDLLGNAQDK-------TPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEK  334 (430)
Q Consensus       264 ~K~~g-p~G~g~l~v~-~~~~~~~~~~-------~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~  334 (430)
                      .|.++ ..| |+++.+ +++.+.++..       ......|.. ..-|.. .-++-. .  +..++..+.   .+++..+
T Consensus       183 ~K~i~~g~G-G~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~G~n-~rms~l-~--Aaig~~qL~---~ld~~~~  253 (384)
T d1b9ha_         183 GKLMTAGEG-GAVVFPDGETEKYETAFLRHSCGRPRDDRRYFH-KIAGSN-MRLNEF-S--ASVLRAQLA---RLDEQIA  253 (384)
T ss_dssp             TSSSCSSSC-EEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCC-CSCCCB-CBCBHH-H--HHHHHHHHT---THHHHHH
T ss_pred             ccccccccc-chhhhhhHHHHHHHHHHHhcCCCCccccccccc-cccccc-cccccc-h--hhhhhhhhh---hcccchh
Confidence            99995 555 666665 4443432110       000000000 000100 111211 1  112233232   4678888


Q ss_pred             HHHHHHHHHHHHHHccCCceecCCCC-CCC-ccceEEEEcCCCchhH--HHHHHHHHcCCeecCCCCC------------
Q 043610          335 MNRKKAELLYNVIDGSNGFYKCPVEK-SVR-SFMNVPFTLEKSDLEA--EFVKEAAKEKMVQLKGHRS------------  398 (430)
Q Consensus       335 ~~~~l~~~l~~~l~~~~G~~~~~~~~-~~r-s~~iv~f~~~~~~~~~--~~~~~L~~~Gi~~~~g~~~------------  398 (430)
                      +.+++.+++.+.|.+..++.....+. ..+ +.....|.++....+.  +|++.|.++||.+...+..            
T Consensus       254 ~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~GI~~~~~y~plh~~~~~~~~~~  333 (384)
T d1b9ha_         254 VRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGA  333 (384)
T ss_dssp             HHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSC
T ss_pred             hhhhhhhhhhhhhhcccccccccccccccccccccccceecccccccHHHHHHHHHHCCCCeeeeCcchhcCHHHHhcCC
Confidence            88889999999998866765443221 122 2234556665422222  5999999999975322110            


Q ss_pred             -------------------CCeeEEeecCCCC-HHHHHHHHHHHHHHHHh
Q 043610          399 -------------------VGGMRASIYNAMP-LAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       399 -------------------~g~iRis~~~~~t-~edv~~ll~~L~~~~~~  428 (430)
                                         ...|++-++...| ++|+++.++.|++++.+
T Consensus       334 ~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~~  383 (384)
T d1b9ha_         334 PDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR  383 (384)
T ss_dssp             CSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHhCEEEccCCCCCCCHHHHHHHHHHHHHHHhh
Confidence                               1248888888877 67999999999998875

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.58  E-value=4.3e-14  Score=137.60  Aligned_cols=278  Identities=14%  Similarity=0.090  Sum_probs=182.6

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+.+++.|+++-|...   .+++ +||..|+..++.+++++||+|++....|.+.+ +. ...+++| ++.++..    
T Consensus        60 T~~~LE~~la~LEg~~~---a~~~-~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~----  131 (392)
T d1gc0a_          60 TLNLLEARMASLEGGEA---GLAL-ASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM----  131 (392)
T ss_dssp             HHHHHHHHHHHHHTCSE---EEEE-SSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT----
T ss_pred             HHHHHHHHHHHHhCCcc---eeeh-hhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCc----
Confidence            34577788999999863   4554 78999999999999999999998877665543 22 2334567 5554432    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc--CCCCccccccccEEEeCCCc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQK  265 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~K  265 (430)
                           -|+++++  ++++|++|++=.+.||+..+.|  .|+++ +++|++++||.+.+  +...|+++. .|+++-|..|
T Consensus       132 -----~d~~~~~~ai~~~t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vvDnT~atP~~~~Pl~~G-aDivihS~TK  205 (392)
T d1gc0a_         132 -----ADLQALEAAMTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELG-ADLVVHSATK  205 (392)
T ss_dssp             -----TCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGT-CSEEEEETTT
T ss_pred             -----cCHHHHHHhCCCCCeEEEecccccceeeecchHHHHHHHHhcCCEEEEecCccCccccChHHhC-CCEEEEecce
Confidence                 3556776  7899999999999999999999  78887 78999999999865  345677663 5899999999


Q ss_pred             cccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          266 NVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       266 ~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      +++-.|   .|.++++++.+++.+-     ..+   ..  ...++++....+.+...|+      -+..+.++..+.+..
T Consensus       206 yi~Ghsd~~~G~v~~~~~~~~~~r~-----~~~---~~--~~G~~~~p~da~ll~rgl~------TL~lRm~~~~~nA~~  269 (392)
T d1gc0a_         206 YLSGHGDITAGIVVGSQALVDRIRL-----QGL---KD--MTGAVLSPHDAALLMRGIK------TLNLRMDRHCANAQV  269 (392)
T ss_dssp             TTTCSSSCCCEEEEECHHHHHHHHH-----THH---HH--HTCCCCCHHHHHHHHHHHT------THHHHHHHHHHHHHH
T ss_pred             eecCCcccccccccchhHHHHHHHH-----HHH---HH--ccCCcCChhhHHHHHhccc------cHHHHHHHHHHHHHH
Confidence            994333   6778888877654210     000   00  1234666666665555554      356777888888888


Q ss_pred             HHHHHHccCCceec--C---CCCC--------CCccceEEEEcCCCchhH--HHHHHHHH--cCCe--------ecC---
Q 043610          343 LYNVIDGSNGFYKC--P---VEKS--------VRSFMNVPFTLEKSDLEA--EFVKEAAK--EKMV--------QLK---  394 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~---~~~~--------~rs~~iv~f~~~~~~~~~--~~~~~L~~--~Gi~--------~~~---  394 (430)
                      +.++|++.+.++-+  |   ..+.        .....+++|.+.+ +.+.  +|++.|+-  .+.-        ..+   
T Consensus       270 lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~~-~~~~~~~f~~~L~l~~~a~SlGg~eSLi~~pa~~  348 (392)
T d1gc0a_         270 LAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG-GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASM  348 (392)
T ss_dssp             HHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGT
T ss_pred             HHHHHHhCCCccEEeeccccCCcccccccccccCCCcEEEEEEeC-CHHHHHHHHHhCCcceEeeccCCcChhhcCcccc
Confidence            98999875443321  1   0111        1124678899864 2222  35555431  1111        000   


Q ss_pred             CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          395 GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       395 g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      -+.            ..+.||+|++.    ||++.+++-|++.++.
T Consensus       349 th~~~~~e~r~~~Gi~~~liRlSVGl----Ed~eDLi~Dl~~AL~a  390 (392)
T d1gc0a_         349 THSSYTPEERAHYGISEGLVRLSVGL----EDIDDLLADVQQALKA  390 (392)
T ss_dssp             TTSSSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHcCCCcCeEEEEeee----CCHHHHHHHHHHHHHh
Confidence            011            23569999996    6666666666666543

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.54  E-value=4e-13  Score=130.76  Aligned_cols=277  Identities=14%  Similarity=0.156  Sum_probs=181.4

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHH-HHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAF-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+.+++.|+.+-|...   .+++ +||..|+..++.+++++||+|++..+.+.+. ++. ....++| ++..+..    
T Consensus        64 T~~~LE~~la~LEgg~~---a~~~-sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~----  135 (397)
T d1y4ia1          64 TTDALEKKLAVLERGEA---GLAT-ASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA----  135 (397)
T ss_dssp             HHHHHHHHHHHHHTCSE---EEEE-SSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT----
T ss_pred             HHHHHHHHHHHHhCCcc---ceee-hHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCceEeeccCC----
Confidence            34577889999999863   3444 7899999999999999999999877665443 333 2455778 6665543    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc--CCCCccccccccEEEeCCCc
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQK  265 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~K  265 (430)
                           -|.+.++  ++++||+|++=.+.||+..+.|  .|+++ +++|++++||.+-+  +...|+++. .|+++.|..|
T Consensus       136 -----~d~~~~~~~i~~~Tklv~~Esp~NP~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~~~~Pl~~G-aDivihS~TK  209 (397)
T d1y4ia1         136 -----GKPEEIRAAMRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLG-ADIVVHSVTK  209 (397)
T ss_dssp             -----TSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGT-CSEEEEETTT
T ss_pred             -----CCHHHHHHhcCCCCcEEEecCCcccceeecccHHHHHHhhcCCceEEecCcccCcccCcchhcC-CCEEEEehhh
Confidence                 2456676  7899999999999999999999  78887 78999999999854  445666553 5899999999


Q ss_pred             cccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          266 NVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       266 ~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++|-.+   .|.++.+++.+.+.+     +..+.     ....++++....+.+...|+      -+.-+.+++.+.+..
T Consensus       210 yi~Ghsdvl~G~v~~~~~~~~~~r-----~~~~~-----~~~G~~l~p~~a~l~~rgl~------TL~lRm~~~~~nA~~  273 (397)
T d1y4ia1         210 YINGHGDVIGGIIVGKQEFIDQAR-----FVGLK-----DITGGCMSPFNAWLTLRGVK------TLGIRMERHCENALK  273 (397)
T ss_dssp             TTTCSSCCCCEEEEECHHHHHHHH-----HTHHH-----HTTCCCCCHHHHHHHHHHHT------THHHHHHHHHHHHHH
T ss_pred             hcCCCcceeeeccCCCHHHHHHHH-----HHHHH-----hCcCCcCCHHHHHHHHcCcC------cHHHHHHHHHHHHHH
Confidence            994222   578888887765421     00010     01234566666665555554      356777888888899


Q ss_pred             HHHHHHccCCceec--CCCCCC-----------CccceEEEEcCCCchhH--HHHHHHHHc--CCe--------ecCC--
Q 043610          343 LYNVIDGSNGFYKC--PVEKSV-----------RSFMNVPFTLEKSDLEA--EFVKEAAKE--KMV--------QLKG--  395 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~~~~~~-----------rs~~iv~f~~~~~~~~~--~~~~~L~~~--Gi~--------~~~g--  395 (430)
                      +.++|++.+.+.-+  |.-+.+           ....+++|.+.+ +.+.  +|++.|+--  +.-        ..+.  
T Consensus       274 lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~-~~~~~~~f~~~L~l~~~a~SlGg~eSLi~~p~~~  352 (397)
T d1y4ia1         274 IARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG-GLEAGRRMINSVELCLLAVSLGDTETLIQHPASM  352 (397)
T ss_dssp             HHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETT-HHHHHHHHHHTCSSSEECSCCSCSSCEEECTTTT
T ss_pred             HHHHHHhCCCcCeEeCCCCCCCccccccccccCCCCeEEEEEecC-CHHHHHHHHHcCCccceeeccCcccceeeCcccc
Confidence            99999975544322  211111           135678898874 2222  344443211  110        1110  


Q ss_pred             -CC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          396 -HR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       396 -~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       +.            ..+.||+|++.    ||++.|++-|++.++
T Consensus       353 th~~~~~e~r~~~Gi~~~liRlsvGl----Ed~~DLi~Dl~~AL~  393 (397)
T d1y4ia1         353 THSPVAPEERLKAGITDGLIRLSVGL----EDPEDIINDLEHAIR  393 (397)
T ss_dssp             TTSSSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHcCCCcCEEEEEecc----CCHHHHHHHHHHHHH
Confidence             11            23569999996    666666666665554

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.52  E-value=2.7e-12  Score=124.79  Aligned_cols=315  Identities=12%  Similarity=-0.006  Sum_probs=193.5

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPND  159 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd  159 (430)
                      +.++-++++.+.+..    |.    .+ .++    .+++.++.+++++|+.   .++++ +|||.|+.+++.++ .++||
T Consensus        10 ~~~~~~~~v~~~l~~----~~----~~-~G~----~v~~fE~~~~~~~g~k---~ai~~-~Sgt~Al~~al~al~~~~~~   72 (371)
T d2fnua1          10 LDKEDKKAVLEVLNS----KQ----LT-QGK----RSLLFEEALCEFLGVK---HALVF-NSATSALLTLYRNFSEFSAD   72 (371)
T ss_dssp             CCHHHHHHHHHHHTS----SC----CS-SSH----HHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHSSCCCTT
T ss_pred             CCHHHHHHHHHHHcC----CC----cc-CCH----HHHHHHHHHHHHHCcC---eEEEE-ecHHHHHHHHHHHhcccCCC
Confidence            456667777776642    11    11 132    4668889999999997   46665 78999999999997 44444


Q ss_pred             --cEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-
Q 043610          160 --PVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-  231 (430)
Q Consensus       160 --~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-  231 (430)
                        +|++....+.+.  .......| +++.+.+..   .+ ..+.++++  +++++++|+++|   ..|...+  +|.++ 
T Consensus        73 ~~eVi~p~~t~~a~--~~ai~~~G~~pv~vDi~~---~~-~~~~~~~~~~~~~~t~avi~vh---~~G~~~~~~~i~~~~  143 (371)
T d2fnua1          73 RNEIITTPISFVAT--ANMLLESGYTPVFAGIKN---DG-NIDELALEKLINERTKAIVSVD---YAGKSVEVESVQKLC  143 (371)
T ss_dssp             SCEEEECSSSCTHH--HHHHHHTTCEEEECCBCT---TS-SBCGGGSGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHH
T ss_pred             CCeeeccccccccc--ceeeeccCcccccccccc---cc-cccchhhhhhccchhhcccccc---ccccccccccccccc
Confidence              687655544443  23344567 888787754   22 23445555  789999999886   4488777  67775 


Q ss_pred             cCCCcEEEEeccCcCCCCccc--c---ccccEEEeCCCccccCCccEEEEEc-HHHHhccCCCCCc----ccccc-chhh
Q 043610          232 KNSTGILVADMSSNFCSKPVD--V---TRFGVIYAGAQKNVGPSGVTIVIVR-KDLLGNAQDKTPL----MLDYK-IHDE  300 (430)
Q Consensus       232 ~~~g~~lvvD~a~s~G~~~id--l---~~~d~~~~s~~K~~gp~G~g~l~v~-~~~~~~~~~~~p~----~~~~~-~~~~  300 (430)
                      +++|++++-|++|++|+..-.  +   .+..++.+...|.+...+=|+++.+ +++.+.+....-.    ...+. ....
T Consensus       144 ~~~~i~lIEDaaqa~Ga~~~~~~~G~~g~~~~~Sf~~~K~l~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  223 (371)
T d2fnua1         144 KKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKS  223 (371)
T ss_dssp             HHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESS
T ss_pred             cccchhhccchhhccCceeccccCCccccccccccccccccccccceEEEeechhhhhhccccccccccccccccccccc
Confidence            689999999999999986321  2   2223666777899963333676665 4555543210000    00000 0000


Q ss_pred             cCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCC-CCCCCccceEEEEcCCCc-hh
Q 043610          301 NNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPV-EKSVRSFMNVPFTLEKSD-LE  378 (430)
Q Consensus       301 ~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~-~~~~rs~~iv~f~~~~~~-~~  378 (430)
                      -+.. .-++-   ..+..++..+.   -++...++.++.+.+..+.|.+..++.+... .....+...+++.+.+.. ..
T Consensus       224 ~G~n-~r~se---l~Aaigl~qL~---~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  296 (371)
T d2fnua1         224 IGHN-FRLNE---IQSALGLSQLK---KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTC  296 (371)
T ss_dssp             CCCB-CCCCH---HHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGG
T ss_pred             cccc-ccccc---hhhhhhhhhhh---hccchhhhhhhhhhhhcccccccccccccccccccccccccccccccccchhH
Confidence            0111 11111   11222333332   4677778888888888899987666665432 223334444555555311 12


Q ss_pred             -HHHHHHHHHcCCeecCCCC---------------C--------CCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          379 -AEFVKEAAKEKMVQLKGHR---------------S--------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       379 -~~~~~~L~~~Gi~~~~g~~---------------~--------~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                       .++.+.|.++||.+...+.               .        ...+.+-++...+++|+++.++.|+++++.
T Consensus       297 r~~~~~~L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~~  370 (371)
T d2fnua1         297 KKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFES  370 (371)
T ss_dssp             HHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHHHHHc
Confidence             2689999999987543221               0        125888788889999999999999998875

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.44  E-value=6e-12  Score=120.05  Aligned_cols=205  Identities=11%  Similarity=0.068  Sum_probs=141.5

Q ss_pred             HHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHH-HHHHHhC-CceEEecCCCCcCC
Q 043610          119 KAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAF-KEAQKFC-NPQVIWSGKAEKYT  195 (430)
Q Consensus       119 ~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~-~~a~~~g-~~~~v~~~~~~~~g  195 (430)
                      .+++.++++-|..   ..+++ +||..|+..++.+++++||+|++...-|.+. ++. +..+++| ++.++..       
T Consensus         2 aLE~~la~Leg~~---~a~~~-sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~-------   70 (331)
T d1pffa_           2 ALEGKIAKLEHAE---ACAAT-ASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-------   70 (331)
T ss_dssp             HHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-------
T ss_pred             HHHHHHHHHhCCC---eEEEE-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecc-------
Confidence            3568889998875   34444 7899999999999999999998766554443 222 3456678 6665543       


Q ss_pred             CCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc--cCCCcEEEEeccCc--CCCCccccccccEEEeCCCccc
Q 043610          196 KIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA--KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQKNV  267 (430)
Q Consensus       196 ~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~--~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~K~~  267 (430)
                        -|.++++  ++++|++|++-.+.||+..+.|  .+.++  +++|++++||-+-+  +...|+++. .|+++.|..|++
T Consensus        71 --~d~~~~~~~i~~~t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~~~pl~~G-aDiVv~S~TKy~  147 (331)
T d1pffa_          71 --AVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLG-VDIVVHSATKYI  147 (331)
T ss_dssp             --TSTTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGT-CSEEEEETTTTT
T ss_pred             --cchhhHhhhcccccceeeeecccccccccccchhhhhhhhcccCceEEeeccccccccccccccC-CCEEEecchhhc
Confidence              2445565  7899999999999999999999  46764  57899999998754  445666654 499999999999


Q ss_pred             cCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043610          268 GPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLY  344 (430)
Q Consensus       268 gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~  344 (430)
                      +-.|   .|.++.+++........     .+     ......+++....+.+...++-      +..+.+++.+.+..+.
T Consensus       148 ~Gh~d~~~G~v~~~~~~~~~~~~~-----~~-----~~~~G~~l~p~~a~ll~rgl~T------l~~Rm~~~~~nA~~lA  211 (331)
T d1pffa_         148 NGHTDVVAGLVCSRADIIAKVKSQ-----GI-----KDITGAIISPHDAWLITRGTLT------LDMRVKRAAENAQKVA  211 (331)
T ss_dssp             SSSSSCCCEEEEECHHHHHHHHHT-----CC-----CCCCCCCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
T ss_pred             CCCCccccccccccccchhhhhhh-----hh-----hhccCCCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
Confidence            4222   57777887654432100     00     0112235666666666666653      4566777788888888


Q ss_pred             HHHHccCCc
Q 043610          345 NVIDGSNGF  353 (430)
Q Consensus       345 ~~l~~~~G~  353 (430)
                      ++|++.+.+
T Consensus       212 ~~L~~hp~V  220 (331)
T d1pffa_         212 EFLHEHKAV  220 (331)
T ss_dssp             HHHHHCTTC
T ss_pred             HhhhhCCcE
Confidence            888875543

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.40  E-value=6.9e-12  Score=121.52  Aligned_cols=275  Identities=12%  Similarity=0.083  Sum_probs=172.3

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HHH-HHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AFK-EAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~~-~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+.+-|..   ..+++ +||..|+.+ +.+++++||+|++...-+-+.+ ..+ ...++| ++..+..     
T Consensus        51 ~~~le~~la~LE~~~---~a~~f-sSGMaAisa-ll~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~-----  120 (380)
T d1ibja_          51 RDALESLLAKLDKAD---RAFCF-TSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT-----  120 (380)
T ss_dssp             HHHHHHHHHHHHTCS---EEEEE-SSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT-----
T ss_pred             HHHHHHHHHHHcCCc---eEEeh-hhHHHHHHH-HHHhhCCCCEEEEEecccccccchhhhhhccccccccccCc-----
Confidence            347778899999976   34554 788999975 6778899999987665443332 221 223456 4443322     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc--CCCCccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~K~  266 (430)
                          .+.++++  ++++|++|++=.+.||+..+.|  .|+++ +++|++++||.+-+  +...|+++. .|+++.|..|+
T Consensus       121 ----~~~~~~~~ai~~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~~~Pl~~G-aDiVvhS~TKy  195 (380)
T d1ibja_         121 ----TKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELG-ADIVMHSATKF  195 (380)
T ss_dssp             ----TSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTT-CSEEEEETTTT
T ss_pred             ----chHHHHHHHhccCccEEEeccccccccccccHHHHHHHHHHcCCeEEeeccccccccccccccC-CCEEEecccce
Confidence                3456666  7899999999999999999999  78887 79999999999853  455677653 59999999999


Q ss_pred             ccCCc---cEEEEEcHH-HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VGPSG---VTIVIVRKD-LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~gp~G---~g~l~v~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++-.|   .|.++++++ +.+.+..       +   .  .....+++....+.+...|+      -++.+.+++.+.+..
T Consensus       196 i~GhsDv~~G~v~~~~~~~~~~~~~-------~---~--~~~G~~l~p~~a~ll~rgl~------Tl~lRm~~~~~nA~~  257 (380)
T d1ibja_         196 IAGHSDVMAGVLAVKGEKLAKEVYF-------L---Q--NSEGSGLAPFDCWLCLRGIK------TMALRIEKQQENARK  257 (380)
T ss_dssp             TTCSSCCCCEEEEECSHHHHHHHHH-------H---H--HHTTCBCCHHHHHHHHHHHT------THHHHHHHHHHHHHH
T ss_pred             eccccCccccccccchhhHHHHHHh-------h---c--cccCCcCCHHHHHHHHhcch------hhhhhHHHHHHHHHH
Confidence            94222   577777754 3333211       0   0  01224566666666655554      467788888889999


Q ss_pred             HHHHHHccCCceec--CC--CCC---------CCccceEEEEcCCCchhHHHHHHHHH--cCCe--------ecC---CC
Q 043610          343 LYNVIDGSNGFYKC--PV--EKS---------VRSFMNVPFTLEKSDLEAEFVKEAAK--EKMV--------QLK---GH  396 (430)
Q Consensus       343 l~~~l~~~~G~~~~--~~--~~~---------~rs~~iv~f~~~~~~~~~~~~~~L~~--~Gi~--------~~~---g~  396 (430)
                      +.++|++.+.+.-+  |-  +.+         ....++++|.+.+.....+|++.|+-  .+.-        ..+   .|
T Consensus       258 lA~~L~~hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~~~~~a~~f~d~l~l~~~a~SlG~~~SLi~~p~~~th  337 (380)
T d1ibja_         258 IAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH  337 (380)
T ss_dssp             HHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTT
T ss_pred             HHHHHHhCCCeeEEeccccccCccccccccccccccccccccccHHHHHHHHHHhCCcCeEeeccCCccccccCchhhhh
Confidence            99999975433321  21  111         12335677776531111145555431  1111        111   01


Q ss_pred             -------C-----CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          397 -------R-----SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       397 -------~-----~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                             +     ..+-||+|++.    ||++.+++-|++.++.
T Consensus       338 ~~~~~e~r~~~Gi~~~lvRlSvGl----E~~eDLi~Dl~qAl~~  377 (380)
T d1ibja_         338 ASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKT  377 (380)
T ss_dssp             CSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHS
T ss_pred             hcCCHHHHHHcCCCcCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence                   1     13469999996    6777777777776654

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.40  E-value=6.3e-11  Score=116.52  Aligned_cols=299  Identities=12%  Similarity=0.027  Sum_probs=184.1

Q ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcC-CCCCcEEEEeCChhHHHHH--HHHHHhC-CceE
Q 043610          110 GKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLC-TPNDPVDYIVTGSWGDKAF--KEAQKFC-NPQV  185 (430)
Q Consensus       110 ~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~-~~gd~vl~~~~g~~~~~~~--~~a~~~g-~~~~  185 (430)
                      ++...+.+-+....|+++.|.+.- . +-...|++..+..++...- ...+++++...-+......  ..++..| +++.
T Consensus       103 sQG~Lq~l~e~q~~l~eltGmd~~-n-~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~  180 (437)
T d1wyua1         103 SQGVLQATFEYQTMIAELAGLEIA-N-ASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLT  180 (437)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSEE-C-SCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCcc-c-cCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEe
Confidence            567788899999999999999731 1 2223567777776655542 3456666554444433222  2344457 7776


Q ss_pred             EecCCCCcCCCCCCccccccCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccC-cCCCCcccccc--ccEE
Q 043610          186 IWSGKAEKYTKIPNFDALEQNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSS-NFCSKPVDVTR--FGVI  259 (430)
Q Consensus       186 v~~~~~~~~g~~~d~~~l~i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~-s~G~~~idl~~--~d~~  259 (430)
                      ++...    +. .+.++  +++++..|+++++++ .|...+  +|.++ ++.|+++++|+.- +++.+ ....+  .|++
T Consensus       181 v~~~~----~~-~~~~~--~~~~~Aavmi~~Pnt-~G~~ed~~~i~~~~h~~G~l~~~~ad~~al~~l-~~Pg~~GaDi~  251 (437)
T d1wyua1         181 LPLEG----GR-TPLPE--VGEEVGAVVVQNPNF-LGALEDLGPFAEAAHGAGALFVAVADPLSLGVL-KPPGAYGADIA  251 (437)
T ss_dssp             ECCBT----TB-CCCCC--CCTTEEEEEEESSCT-TSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTB-CCHHHHTCSEE
T ss_pred             eeccc----cc-chhhh--hccceeEEEEccccc-cccccchHHHHHHhhhccceEEeeechhhhhcc-ccccccccceE
Confidence            66532    21 12222  568899999988766 598887  56665 6788888877643 33332 12233  3788


Q ss_pred             EeCCCcccc-CCc-----cEEEEEcHHHHhccCCCCCc----------c-c--cccc-hh--hc-CCCCCCccHHHHHHH
Q 043610          260 YAGAQKNVG-PSG-----VTIVIVRKDLLGNAQDKTPL----------M-L--DYKI-HD--EN-NSLYNTPPCYCIYMC  316 (430)
Q Consensus       260 ~~s~~K~~g-p~G-----~g~l~v~~~~~~~~~~~~p~----------~-~--~~~~-~~--~~-~~~~~T~~~~~~~a~  316 (430)
                      +++.| -|| |.|     .|++.+++++...+......          + +  ..+. +.  ++ .+...|-.......+
T Consensus       252 ~g~~q-~fg~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a  330 (437)
T d1wyua1         252 VGDGQ-SLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMG  330 (437)
T ss_dssp             EEECT-TTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHH
T ss_pred             eeccc-eeccccCCCcCccccccccchhhccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHH
Confidence            88844 443 544     69999999887654321110          0 0  0000 00  11 112234444433344


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecC--
Q 043610          317 GLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLK--  394 (430)
Q Consensus       317 ~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~--  394 (430)
                      ...+.++-. .|++++.++...+++++.+.|.+..|++++. +.. .- .-+++.++.  ...++.++|.++||....  
T Consensus       331 ~~Y~~~lG~-~GL~~ia~~a~~~A~yl~~~L~~~~g~~~~~-~~~-~f-~ef~v~~~~--~~~~i~k~L~d~G~~~~~~~  404 (437)
T d1wyua1         331 AMYLAALGP-EGLREVALKSVEMAHKLHALLLEVPGVRPFT-PKP-FF-NEFALALPK--DPEAVRRALAERGFHGATPV  404 (437)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTCEECS-CSS-BC-SEEEEECSS--CHHHHHHHHHHTTCCCCEEC
T ss_pred             HHHhhhcCc-ccHHHHHHHHHHHHHHHHHHhhhcCCeeccC-CCC-ee-eEEEEECCC--CHHHHHHHHHhCCCCCCccc
Confidence            445555553 4899999999999999999999877887653 211 12 234455542  123799999999996311  


Q ss_pred             -CCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          395 -GHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       395 -g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                       .....+.+.|++.-.+|++|||+|+++|++++
T Consensus       405 ~~~~~~~~lli~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         405 PREYGENLALFAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             CTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCCeEEEecCCCCCHHHHHHHHHHHHHhC
Confidence             11124579999998899999999999999863

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.40  E-value=5.1e-11  Score=115.91  Aligned_cols=209  Identities=13%  Similarity=0.071  Sum_probs=145.7

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHH-HHHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAF-KEAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~-~~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+.+++.|+++-|..   ..+++ +||..|+..++.+++++||+|++....+.+. .+. ....+.| ++.++..    
T Consensus        60 T~~~le~~la~LEg~~---~a~~~-sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~----  131 (394)
T d1e5ea_          60 TVSNLEGKIAFLEKTE---ACVAT-SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINT----  131 (394)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT----
T ss_pred             HHHHHHHHHHHHhCCc---ceeee-ccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeeccCC----
Confidence            3457778999999986   34554 7899999999999999999998766544332 232 2455667 6655543    


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCcc-c-cCCCcEEEEeccCc--CCCCccccccccEEEeCCC
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPS-A-KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQ  264 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~-~-~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~  264 (430)
                           .|.++++  +++++++|++-.+.||+..+.|  .+.+ + +++|++++||-+-+  +...|+++. .|+++.|..
T Consensus       132 -----~d~~~~~~~i~~~t~lv~~Etp~NP~l~v~Di~~~~~~~~~~~g~~vvvDnT~atP~~~~Pl~~G-aDiVvhS~T  205 (394)
T d1e5ea_         132 -----AIPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFG-VDVVVHSAT  205 (394)
T ss_dssp             -----TSTTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGT-CSEEEEETT
T ss_pred             -----CCHHHHHHhhcccccEEEEeccCCcceeeehhhhhhhccccccCeEEEecCcccCcccCCchhcC-CCEEEechh
Confidence                 2345665  7899999999999999999999  4766 4 46889999998743  445566653 489999999


Q ss_pred             ccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          265 KNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       265 K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      |+++-.|   .|.++.+++.+...+..     .+     ......+++....+.+...|+      -+..+.++..+.+.
T Consensus       206 Ky~~GhsDv~~G~v~~~~~~~~~~~~~-----~~-----~~~~G~~lsp~~a~ll~rgl~------TL~lRm~r~~~nA~  269 (394)
T d1e5ea_         206 KYINGHTDVVAGLICGKADLLQQIRMV-----GI-----KDITGSVISPHDAWLITRGLS------TLNIRMKAESENAM  269 (394)
T ss_dssp             TTTTCSSCCCCEEEEECHHHHHHHHHT-----CC-----CCCCCCCCCHHHHHHHHHHHT------THHHHHHHHHHHHH
T ss_pred             hhcCCCcccccccccchhhHHHHHHHH-----HH-----HHhhCCCCChHHHHHHHhhch------hHHHHHHHHHHHHH
Confidence            9994223   57788887766542100     00     011234666666665555554      46778888889999


Q ss_pred             HHHHHHHccCCce
Q 043610          342 LLYNVIDGSNGFY  354 (430)
Q Consensus       342 ~l~~~l~~~~G~~  354 (430)
                      .+.++|++.+.++
T Consensus       270 ~lA~~L~~hp~V~  282 (394)
T d1e5ea_         270 KVAEYLKSHPAVE  282 (394)
T ss_dssp             HHHHHHHTCTTEE
T ss_pred             HHHHHHhhcCCcc
Confidence            9999999855543

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.39  E-value=1.3e-11  Score=119.83  Aligned_cols=291  Identities=12%  Similarity=0.007  Sum_probs=171.2

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc-CCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCc
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL-CTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl-~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~  193 (430)
                      ..++.++.+++++|..   .++++ +|||.|+.+++.++ +++||+|++....+.+.  .......| +++.+.+.++  
T Consensus        22 ~~~~fE~~~~~~~~~~---~~~~~-~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~--~~~~~~~g~~pv~~Di~~~--   93 (374)
T d1o69a_          22 FVNRFEQSVKDYSKSE---NALAL-NSATAALHLALRVAGVKQDDIVLASSFTFIAS--VAPICYLKAKPVFIDCDET--   93 (374)
T ss_dssp             HHHHHHHHHHHHHCCS---EEEEE-SCHHHHHHHHHHHTTCCTTCEEEEESSSCGGG--THHHHHTTCEEEEECBCTT--
T ss_pred             HHHHHHHHHHHHHCcC---eEEEe-CCHHHHHHHHHHHcCCCCcCEEEeCCcchHhh--HHHHhhccceeEecccccc--
Confidence            3568889999999997   46665 78999999999998 78999999877665543  23344567 8888877532  


Q ss_pred             CCCCCCcc--ccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCcCCCCc--cccccc-c--EEEe
Q 043610          194 YTKIPNFD--ALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSNFCSKP--VDVTRF-G--VIYA  261 (430)
Q Consensus       194 ~g~~~d~~--~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s~G~~~--idl~~~-d--~~~~  261 (430)
                       ....+.+  ++.  +++++++|+++|.   .|...+  +|.++ +++|++++-|++|++|+.-  ..+..+ |  ++.+
T Consensus        94 -~~~~~~~~~~~~~~~~~~~~aii~~~~---~G~~~d~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~~G~~gd~~~fSf  169 (374)
T d1o69a_          94 -YNIDVDLLKLAIKECEKKPKALILTHL---YGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSY  169 (374)
T ss_dssp             -SSBCHHHHHHHHHHCSSCCCEEEEECG---GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEEC
T ss_pred             -cccccccccccchhccccccccccccc---ccchhhhHHHHHHhhccCcchhhhhhhhhcceECCeecCCCCceEEEec
Confidence             1122222  222  6788999999874   466667  67775 6899999999999999852  112222 4  4555


Q ss_pred             CCCccccCCccEEEEEc-HHHHhccCCCCCc--cccccch-hhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 043610          262 GAQKNVGPSGVTIVIVR-KDLLGNAQDKTPL--MLDYKIH-DENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNR  337 (430)
Q Consensus       262 s~~K~~gp~G~g~l~v~-~~~~~~~~~~~p~--~~~~~~~-~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~  337 (430)
                      ...|.++-.|-|+++.+ +++.+.+......  ...+... ..-|.- .-++-.   .+...+..+.   -++...++.+
T Consensus       170 ~~~K~l~tgeGG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N-~rm~ei---~Aaig~~qL~---~l~~~i~~r~  242 (374)
T d1o69a_         170 NGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYN-YRLSNV---LGAIGVAQME---VLEQRVLKKR  242 (374)
T ss_dssp             CTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCB-CBCCHH---HHHHHHHHHT---THHHHHHHHH
T ss_pred             cCccccccccceeehhhhHHHHHhhccccccccccccccccccCCcc-ccccch---hhhhhHHHHh---hhhhhcchhH
Confidence            56699964344777765 5555443210000  0000000 000100 011221   1122222222   3567777878


Q ss_pred             HHHHHHHHHHHccCCceecCCCCCCCcc-ceEEEEcC---------------------CCchhHHHHHHHHHcCCeecCC
Q 043610          338 KKAELLYNVIDGSNGFYKCPVEKSVRSF-MNVPFTLE---------------------KSDLEAEFVKEAAKEKMVQLKG  395 (430)
Q Consensus       338 ~l~~~l~~~l~~~~G~~~~~~~~~~rs~-~iv~f~~~---------------------~~~~~~~~~~~L~~~Gi~~~~g  395 (430)
                      +.+++..+.|.+...  +....+...++ ....+.+.                     ......++.+.|.++||.+.+.
T Consensus       243 ~i~~~y~~~L~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~  320 (374)
T d1o69a_         243 EIYEWYKEFLGEYFS--FLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPL  320 (374)
T ss_dssp             HHHHHHHHHHTTTEE--CCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCC
T ss_pred             HHHHHHHhhcccccc--ccccccCCCCChhheeeeeccccccccccccccccchhhccchhhHHHHHHHHHHCCCCEEEe
Confidence            888888888876321  11111111111 11111110                     0011226999999999975432


Q ss_pred             CCC----------------------CCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          396 HRS----------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       396 ~~~----------------------~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                      +..                      ...|.+-++..+|++||++.++.|+++++
T Consensus       321 y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~lk  374 (374)
T d1o69a_         321 WKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK  374 (374)
T ss_dssp             CCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             CcchhhChhhhcCCCCCCHHHHHHHhCEEECcCCCCCCHHHHHHHHHHHHHHHC
Confidence            210                      12477778888999999999999999874

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.39  E-value=8.7e-12  Score=120.88  Aligned_cols=205  Identities=11%  Similarity=0.084  Sum_probs=139.0

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHH-HHHH-HHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGD-KAFK-EAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~-~~~~-~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+++-|..   ..+++ +||..|+..++.+++++||+|++....+.+. .+.. ...+.| ++.++.      
T Consensus        52 ~~~le~~la~LEgg~---~a~~~-sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d------  121 (384)
T d1cs1a_          52 RDVVQRALAELEGGA---GAVLT-NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD------  121 (384)
T ss_dssp             HHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC------
T ss_pred             HHHHHHHHHHHhCCC---ceEEe-cChHHHHHHHHhhcccccceecccccccchhhhhhhhhhccccccccccc------
Confidence            447778899999976   34554 7899999999999999999999776555443 2222 222345 333332      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc--CCCCccccccccEEEeCCCcc
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQKN  266 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~K~  266 (430)
                         ..|.++++  +.++|++|++=.+.||+..+.|  .|+++ +++|++++||.+-+  +...|+++. .|+++.|..|+
T Consensus       122 ---~~d~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~Pl~~G-aDiVvhS~TKy  197 (384)
T d1cs1a_         122 ---QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALG-ADLVLHSCTKY  197 (384)
T ss_dssp             ---TTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGT-CSEEEEETTTT
T ss_pred             ---CCCHHHHHhhccccccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCcccccccccC-CCEEEEccccc
Confidence               13455665  7899999999999999999999  78887 78999999999853  445566553 58999999999


Q ss_pred             ccCCc---cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043610          267 VGPSG---VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAEL  342 (430)
Q Consensus       267 ~gp~G---~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~  342 (430)
                      ++-.|   .|.++.+. +..+.+..       +.   .  ....+++....+.+...|+      -+.-+.+++.+.+..
T Consensus       198 i~Ghsdv~~G~vv~~~~~~~~~~~~-------~~---~--~~G~~~~p~~a~ll~rgL~------TL~lRm~~~~~nA~~  259 (384)
T d1cs1a_         198 LNGHSDVVAGVVIAKDPDVVTELAW-------WA---N--NIGVTGGAFDSYLLLRGLR------TLVPRMELAQRNAQA  259 (384)
T ss_dssp             TTCSSCCCCEEEEESSHHHHHHHHH-------HH---H--HHTCBCCHHHHHHHHHHHT------THHHHHHHHHHHHHH
T ss_pred             cccCCCcccccccCCchhhhhhhhh-------hh---h--hhhhccccccHHHHhhccc------hhHHHHHHHHHHHHH
Confidence            95333   46666654 33332210       00   0  1123455555555544443      366778888888999


Q ss_pred             HHHHHHccCCc
Q 043610          343 LYNVIDGSNGF  353 (430)
Q Consensus       343 l~~~l~~~~G~  353 (430)
                      +.++|++.+.+
T Consensus       260 lA~~L~~hp~V  270 (384)
T d1cs1a_         260 IVKYLQTQPLV  270 (384)
T ss_dssp             HHHHHTTCTTE
T ss_pred             HHHhcccCCce
Confidence            99999875544

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.38  E-value=9.1e-12  Score=121.18  Aligned_cols=275  Identities=11%  Similarity=0.018  Sum_probs=174.4

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HHH-HHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AFK-EAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~~-~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+.+++.|+++-|..   ..+++ +||..|+..++.+++++||+|++....+.+.+ +.+ ..+++| ++..+..    
T Consensus        68 t~~~LE~~la~LEgg~---~a~~~-sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~----  139 (398)
T d1qgna_          68 TTVVLEEKISALEGAE---STLLM-ASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP----  139 (398)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEE-SCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS----
T ss_pred             HHHHHHHHHHHHhCCc---eEEEe-cCcchHHHHHHhhcccccccccccccccchhhhhhcccccccccccccccc----
Confidence            3457779999999975   34554 78999999999999999999997766554432 222 233456 4444432    


Q ss_pred             cCCCCCCcc-ccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc--CCCCccccccccEEEeCCC
Q 043610          193 KYTKIPNFD-ALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQ  264 (430)
Q Consensus       193 ~~g~~~d~~-~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~  264 (430)
                           .+.+ ..+  +.++|++|++=.+.||+..+.|  .|+++ +++|++++||.+-+  +...|+++. .|+++.|..
T Consensus       140 -----~~~~~~~~~~~~~~t~~v~~EspsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP~~~~Pl~~G-aDiVihS~T  213 (398)
T d1qgna_         140 -----ADVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALG-ADLVLHSAT  213 (398)
T ss_dssp             -----SCHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTT-CSEEEECTT
T ss_pred             -----cchhhhhhhhccccceEEEccCccccccccchHHHHHHHHhhcCCEEEecceeeccccCCchhhC-CCEEEEech
Confidence                 1222 222  5789999999999999999999  78887 79999999999743  445666553 589999999


Q ss_pred             ccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          265 KNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       265 K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      |++|-.|   .|.+..+++.++.+..       +..     ....+++....+.+...|+      -+..+.+++.+.+.
T Consensus       214 Ky~~Ghsdv~~G~v~~~~~~~~~~~~-------~~~-----~~G~~l~p~~a~ll~rgl~------TL~lRm~~~~~nA~  275 (398)
T d1qgna_         214 KFLGGHNDVLAGCISGPLKLVSEIRN-------LHH-----ILGGALNPNAAYLIIRGMK------TLHLRVQQQNSTAL  275 (398)
T ss_dssp             TTTTCSSSCCCEEEEECHHHHHHHHH-------HHH-----HHCCCCCHHHHHHHHHHGG------GHHHHHHHHHHHHH
T ss_pred             hhcCcccceeehhhcchhhhhhhhhh-------hcc-----cCCCcCCHHHHHHHHhcch------HHHHHHHHHHHHHH
Confidence            9994222   4666677777655321       100     1123566665555554443      35677888888888


Q ss_pred             HHHHHHHccCCceec--CC--C-CCC--------CccceEEEEcCCCchhH--HHHHHHHH--cCCe-------ec-C--
Q 043610          342 LLYNVIDGSNGFYKC--PV--E-KSV--------RSFMNVPFTLEKSDLEA--EFVKEAAK--EKMV-------QL-K--  394 (430)
Q Consensus       342 ~l~~~l~~~~G~~~~--~~--~-~~~--------rs~~iv~f~~~~~~~~~--~~~~~L~~--~Gi~-------~~-~--  394 (430)
                      .+.++|++.+.++-+  |.  + +.+        ....+++|.+.+ +.+.  +|++.|+-  .+.-       +. +  
T Consensus       276 ~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~g-~~~~a~~f~~~L~l~~~a~SlGg~~SLi~~p~~  354 (398)
T d1qgna_         276 RMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG-DLLTTAKFVDALKIPYIAPSFGGCESIVDQPAI  354 (398)
T ss_dssp             HHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS-CHHHHHHHHHHCSSSEECSCCCSSSCEEECHHH
T ss_pred             HHHHHHHhCCCeeecCCCCCCCCcchhhhhhhcCCCCceeeeeecC-CHHHHHHHHHcCCcceeeeCCCCCcceeeCcch
Confidence            999999875544421  21  1 111        124578888864 3322  46665531  1111       00 0  


Q ss_pred             -CC------------CCCCeeEEeecCCCCHHHHHHHHHHHHHHHH
Q 043610          395 -GH------------RSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       395 -g~------------~~~g~iRis~~~~~t~edv~~ll~~L~~~~~  427 (430)
                       .|            ...+.||+|++.    ||++.|++-|++.++
T Consensus       355 ~th~~~~~~~~~~~Gi~~~liRlSvGl----Ed~eDLi~Dl~~AL~  396 (398)
T d1qgna_         355 MSYWDLSQSDRAKYGIMDNLVRFSFGV----EDFDDLKADILQALD  396 (398)
T ss_dssp             HHSTTSCHHHHHTTTCCSSEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred             hccccCCHHHHHhcCCCcCEEEEEecc----CCHHHHHHHHHHHHh
Confidence             01            123569999996    666666666666554

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=5.4e-11  Score=115.61  Aligned_cols=206  Identities=10%  Similarity=-0.004  Sum_probs=139.9

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HHH-HHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AFK-EAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~~-~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+++-|..   ..+++ +||..|+.+++.+++++||+|++...-|-+.. ..+ ...++| ++..+..     
T Consensus        60 ~~~le~~la~LEg~~---~a~~~-~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~-----  130 (391)
T d1cl1a_          60 HFSLQQAMCELEGGA---GCVLF-PCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP-----  130 (391)
T ss_dssp             HHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT-----
T ss_pred             HHHHHHHHHHHhCCc---cEEEe-ccccceeeehhhcccCCCCeEEEecccccchhhhhhhcccccccccccccC-----
Confidence            447778899999975   34554 78999999999999999999987654443322 222 233456 4444432     


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc---cCCCcEEEEeccCc--CCCCccccccccEEEeCCC
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA---KNSTGILVADMSSN--FCSKPVDVTRFGVIYAGAQ  264 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~---~~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s~~  264 (430)
                          .|.++++  +++++++|++=.+.||+..+.|  .|+++   +++|++++||-+-+  +...|+++. .|+++.|..
T Consensus       131 ----~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~Di~~i~~~a~~~~~g~~~vVDnT~atP~~~~Pl~~G-aDivvhS~T  205 (391)
T d1cl1a_         131 ----LIGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFG-IDVSIQAAT  205 (391)
T ss_dssp             ----TCGGGGGGTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGT-CSEEEEETT
T ss_pred             ----ccccccccccccccceeeecccCcccccccccHHHHHHHHhccCCcEEEEeccccchhhhcccccc-cceEEeecc
Confidence                2445665  7899999999999999999999  67665   25799999999754  344566653 489999999


Q ss_pred             ccccCCc---cEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043610          265 KNVGPSG---VTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAE  341 (430)
Q Consensus       265 K~~gp~G---~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~  341 (430)
                      |+++-.|   .|.++.+++..+.+..       +.     ....++++....+.+...|+      -+..+.+++.+.+.
T Consensus       206 Ky~~GhsdvlgG~vv~~~~~~~~~~~-------~~-----~~~G~~~~p~~a~ll~rgl~------TL~lR~~~~~~nA~  267 (391)
T d1cl1a_         206 KYLVGHSDAMIGTAVCNARCWEQLRE-------NA-----YLMGQMVDADTAYITSRGLR------TLGVRLRQHHESSL  267 (391)
T ss_dssp             TTTTCSSSCCCEEEEECTTTHHHHHH-------HH-----HHTTCCCCHHHHHHHHHHHT------THHHHHHHHHHHHH
T ss_pred             hhccccccccccceeccccccccchh-------hh-----hcccccCCchhhhhhhccch------hHHHHHHHHHHHHH
Confidence            9994222   4666667665544211       00     01224556655555544443      46677888888888


Q ss_pred             HHHHHHHccCCce
Q 043610          342 LLYNVIDGSNGFY  354 (430)
Q Consensus       342 ~l~~~l~~~~G~~  354 (430)
                      .+.++|++.+.+.
T Consensus       268 ~vA~~L~~hp~V~  280 (391)
T d1cl1a_         268 KVAEWLAEHPQVA  280 (391)
T ss_dssp             HHHHHHHTCTTEE
T ss_pred             HHHHHHHhccccc
Confidence            9999998755443

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.36  E-value=7.7e-12  Score=124.88  Aligned_cols=288  Identities=9%  Similarity=0.043  Sum_probs=165.6

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHHHHHHHHHhC-CceEEecCC-----
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGK-----  190 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~-----  190 (430)
                      +.+.++.+++++|.+   .++++ +|||.|+.+++..+++|||+|+. ...++....  .....| ....+....     
T Consensus        77 ~~~lE~~~a~l~G~e---~al~~-~SGt~An~~a~~~l~~~Gd~Vi~-~~~f~~~~~--~i~~~g~~~~~~~~~~~~~~~  149 (456)
T d1c7ga_          77 FYHLEKTVKELFGFK---HIVPT-HQGRGAENLLSQLAIKPGQYVAG-NMYFTTTRF--HQEKNGATFVDIVRDEAHDAS  149 (456)
T ss_dssp             HHHHHHHHHHHHCCS---EEEEE-SSHHHHHHHHHHHHCCTTEEEEE-SSCCHHHHH--HHHHTTEEEEECBCGGGGCTT
T ss_pred             HHHHHHHHHHHhCCC---eEEEC-CCHHHHHHHHHHHhcCCCCeEec-CcchHHHHH--HHHHcCceeeecccccccccc
Confidence            447789999999997   46665 78999999999999999998763 222233222  122344 443332211     


Q ss_pred             -CCcCCCCCCccccc--cCC----CccEEEEeecCCCc-cccCC-----CCccc-cCCCcEEEEeccCcCCCC-------
Q 043610          191 -AEKYTKIPNFDALE--QNP----DAKYLHICANETIH-GVEFK-----EYPSA-KNSTGILVADMSSNFCSK-------  249 (430)
Q Consensus       191 -~~~~g~~~d~~~l~--i~~----~~~lv~i~~~~t~t-G~~~p-----ei~~~-~~~g~~lvvD~a~s~G~~-------  249 (430)
                       ...+...+|++.|+  +++    .+.++++...+|.. |...+     +|.++ +++|+.+++|+++.+|..       
T Consensus       150 ~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~  229 (456)
T d1c7ga_         150 LNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQE  229 (456)
T ss_dssp             CCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHS
T ss_pred             ccCCccccCCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccc
Confidence             01122246777776  432    34577777766664 55566     35554 699999999999865431       


Q ss_pred             ----cccc--------ccccEEEeCCCcccc-CCccEEEEEcHH-HHhccCCCCCccccccchhhcCCCCCCccHHHHHH
Q 043610          250 ----PVDV--------TRFGVIYAGAQKNVG-PSGVTIVIVRKD-LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYM  315 (430)
Q Consensus       250 ----~idl--------~~~d~~~~s~~K~~g-p~G~g~l~v~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a  315 (430)
                          ..++        ...|++++|.+|.++ +.| |+++.+++ +.++++....       ....+..++..+...+.+
T Consensus       230 ~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~~~G-G~i~~~~~~l~~~~r~~~~-------~~~g~~~~g~~~~~~~~a  301 (456)
T d1c7ga_         230 AGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIG-GFLCMNDEEMFSAAKELVV-------VYEGMPSYGGLAGRDMEA  301 (456)
T ss_dssp             TTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSC-EEEEESCHHHHHHHHHHHH-------HHTCCTTTTTCCHHHHHH
T ss_pred             cccCCCChhhhccccccccccEEEeccccccccce-eEEEcCCHHHHHHHHHhcc-------ccCCCcccchhhHHHHHH
Confidence                1111        123789999999996 666 77777654 4443321110       011122334555555566


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE------EcCCCchhH-HHHHHH-HH
Q 043610          316 CGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF------TLEKSDLEA-EFVKEA-AK  387 (430)
Q Consensus       316 ~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f------~~~~~~~~~-~~~~~L-~~  387 (430)
                      +...+....   +.+.+..+ .+..+++.++|.+ .|+.+.....   ...+...      .++...... ++...| .+
T Consensus       302 ~a~~l~e~~---~~~~l~~r-~~~~~~L~e~L~~-~g~~vv~p~g---~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~  373 (456)
T d1c7ga_         302 MAIGLREAM---QYEYIEHR-VKQVRYLGDKLRE-AGVPIVEPTG---GHAVFLDARRFCPHLTQDQFPAQSLAASIYME  373 (456)
T ss_dssp             HHHHHHHHT---CHHHHHHH-HHHHHHHHHHHHH-TTCCBCSSCC---SSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHH
T ss_pred             HHHHHHHhc---CHHHHHHH-HHHHHHHHHHHHh-ccCCcccCCC---CcceeEechhhccCCCcccccHHHHHHHHHHH
Confidence            655555432   33433333 4455788889986 6776553111   1111110      112111222 455444 56


Q ss_pred             cCCeecC------CC------C---CCCeeEEeecC-CCCHHHHHHHHHHHHHHHH
Q 043610          388 EKMVQLK------GH------R---SVGGMRASIYN-AMPLAGVEKLVAFMKDFQA  427 (430)
Q Consensus       388 ~Gi~~~~------g~------~---~~g~iRis~~~-~~t~edv~~ll~~L~~~~~  427 (430)
                      .||...+      +.      .   ....+|+++.- ..|+++||.++++|+++.+
T Consensus       374 ~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~~~~T~e~iD~Vae~i~~v~~  429 (456)
T d1c7ga_         374 TGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQ  429 (456)
T ss_dssp             HSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCTTSCCHHHHHHHHHHHHHHHT
T ss_pred             hCeeecccCccccccCCcccCccCCccceEEEecCcccCCHHHHHHHHHHHHHHHh
Confidence            6886321      11      0   12259999863 3499999999999999875

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.24  E-value=1.6e-10  Score=113.05  Aligned_cols=287  Identities=13%  Similarity=0.041  Sum_probs=174.0

Q ss_pred             HHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HHH-HHHHhC-CceEEecCCCC
Q 043610          116 IIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AFK-EAQKFC-NPQVIWSGKAE  192 (430)
Q Consensus       116 ~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~~-~a~~~g-~~~~v~~~~~~  192 (430)
                      ..+.+++.|+++-|..   ..+++ +||..|+.+++.+++++||+|++..+.|.+.+ +.+ ...+.| ++..+...   
T Consensus        59 T~~~LE~~la~LE~~~---~a~~~-~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~---  131 (421)
T d2ctza1          59 TVDVLEKRLAALEGGK---AALAT-ASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE---  131 (421)
T ss_dssp             HHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT---
T ss_pred             HHHHHHHHHHHHhCCC---eEEEe-cChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceecccc---
Confidence            3447778899999986   34554 78999999999999999999998776655543 222 345667 55443321   


Q ss_pred             cCCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-cCCCcEEEEeccCc---CCCCccccccccEEEeCCC
Q 043610          193 KYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-KNSTGILVADMSSN---FCSKPVDVTRFGVIYAGAQ  264 (430)
Q Consensus       193 ~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~~~g~~lvvD~a~s---~G~~~idl~~~d~~~~s~~  264 (430)
                           ...++++  ++++|++|++=.+.||+..+.|  .|+++ +++|++++||-+-+   +...|+++. .|+++.|..
T Consensus       132 -----~~~~~~~~~~~~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvDnT~a~tP~~~~Pl~~G-aDiVvhS~T  205 (421)
T d2ctza1         132 -----ERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWG-AALVTHSLT  205 (421)
T ss_dssp             -----CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGT-CSEEEEETT
T ss_pred             -----cCcchhccccCCCceEEEEcCCCcceeEecchHHHHHHHHhcCCceEecccccccceeccccccC-CcEEEEech
Confidence                 1113333  6899999999999999999999  78887 78999999998754   345576553 499999999


Q ss_pred             ccccCCc---cEEEEEcHHHHhccCC------CCCcccccc--c------hhh----c--CCCCCCccHHHHHHHHHHHH
Q 043610          265 KNVGPSG---VTIVIVRKDLLGNAQD------KTPLMLDYK--I------HDE----N--NSLYNTPPCYCIYMCGLVFE  321 (430)
Q Consensus       265 K~~gp~G---~g~l~v~~~~~~~~~~------~~p~~~~~~--~------~~~----~--~~~~~T~~~~~~~a~~~al~  321 (430)
                      |++|-.|   .|.++.+++......+      ..+.+.+..  .      ...    .  ....++++....+.+...|+
T Consensus       206 Kyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~sP~~a~l~~rgl~  285 (421)
T d2ctza1         206 KWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGME  285 (421)
T ss_dssp             TTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHT
T ss_pred             hhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCCHHHHHHHhcCCc
Confidence            9994333   4666665543211000      011111000  0      000    0  01223555555554444443


Q ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec--CC---CCCC---------CccceEEEEcCCCchhH--HHHHHH
Q 043610          322 YLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC--PV---EKSV---------RSFMNVPFTLEKSDLEA--EFVKEA  385 (430)
Q Consensus       322 ~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~--~~---~~~~---------rs~~iv~f~~~~~~~~~--~~~~~L  385 (430)
                            -+.-+.+++.+.+..+.++|++.+.+.-+  |.   .+.+         ....+++|.+.+ +.+.  +|++.|
T Consensus       286 ------TL~lRm~~~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~~G~~~sf~l~~-~~~~a~~f~~~L  358 (421)
T d2ctza1         286 ------TLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG-GYEAAKRFISRL  358 (421)
T ss_dssp             ------THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT-HHHHHHHHHHTC
T ss_pred             ------chhhHHHHHHHHHHHHHhhhccCCCeeEEecCCcCCCccHHHHHHhcCCCCceEEEEEecC-CHHHHHHHHHcC
Confidence                  46778888888889999999985554322  21   1111         123478898874 2222  344444


Q ss_pred             HH--cCCe--------ecC---CCC------------CCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          386 AK--EKMV--------QLK---GHR------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       386 ~~--~Gi~--------~~~---g~~------------~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      +-  .+.-        ..+   .+.            ..+.||+|++.    ||++.|++-|++.+
T Consensus       359 ~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~GI~~~liRlSvGl----Ed~eDLi~DL~qAL  420 (421)
T d2ctza1         359 KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKEAL  420 (421)
T ss_dssp             SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHHHT
T ss_pred             CcCeeccccccccceeeCcccccchhCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHhc
Confidence            31  1110        101   011            23569999996    77777777666543

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.20  E-value=4.2e-09  Score=104.50  Aligned_cols=339  Identities=13%  Similarity=0.072  Sum_probs=193.9

Q ss_pred             ceeecCCCCCCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHH
Q 043610           71 VFNFAAGPANLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAV  150 (430)
Q Consensus        71 ~~l~~~gp~~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~  150 (430)
                      .+.++++.--..|.|.+.+...+     +-..+|-.--.++...+.+-+....+++++|.+-- + .-+-.|+|...+++
T Consensus        67 ~~~lG~~~~hy~P~v~~~~~~~~-----TaYTPYQPaEiSQG~LQalfEfQtmi~eLTGMdva-N-aS~yDGatA~aeA~  139 (471)
T d1wyub1          67 FYPLGSCTMKYNPKLHEEAARLF-----ADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAI-T-LEPAAGAHGELTGI  139 (471)
T ss_dssp             CCCBTTTCCCCCCHHHHHHHHTT-----SSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEE-E-CCCSSHHHHHHHHH
T ss_pred             ccCCccccCccCcchhhhHHHHH-----hccCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcc-c-cccchHHHHHHHHH
Confidence            34444443345667777766432     22333321112567788888999999999999731 1 11235566665655


Q ss_pred             HhhcC---CCC----CcEEEEeCChhHHHHHHHHHHhC-CceEEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCC
Q 043610          151 PLNLC---TPN----DPVDYIVTGSWGDKAFKEAQKFC-NPQVIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETI  220 (430)
Q Consensus       151 ~~sl~---~~g----d~vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~  220 (430)
                      +.+.-   +.+    ..++++...+.... .......+ .++.++...   .+ ..+.+.++  .++++..+++.++++.
T Consensus       140 ~ma~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~a~v~v~~p~~~  214 (471)
T d1wyub1         140 LIIRAYHEDRGEGRTRRVVLVPDSAHGSN-PATASMAGYQVREIPSGP---EG-EVDLEALKRELGPHVAALMLTNPNTL  214 (471)
T ss_dssp             HHHHHHHHHTTCTTTCCEEEEETTSCTHH-HHHHHHTTCEEEEECBCT---TS-SBCHHHHHHHCSTTEEEEEECSSCTT
T ss_pred             HHHHHHhhhcccccccccccCCcccccce-eeeeecccceeecccccc---cc-cccchhhhhhhhccccceeeccCCCc
Confidence            44431   112    22333333332221 11222334 444444321   22 34555554  5677888888776665


Q ss_pred             ccccCC---CCccc-cCCCcEEEEeccCc---CCCCccccccccEEEeCCCcccc-C-----CccEEEEEcHHHHhccCC
Q 043610          221 HGVEFK---EYPSA-KNSTGILVADMSSN---FCSKPVDVTRFGVIYAGAQKNVG-P-----SGVTIVIVRKDLLGNAQD  287 (430)
Q Consensus       221 tG~~~p---ei~~~-~~~g~~lvvD~a~s---~G~~~idl~~~d~~~~s~~K~~g-p-----~G~g~l~v~~~~~~~~~~  287 (430)
                       |...+   +++++ ++.+..+++|.+..   .+..+-.=.-.|.++.+.|+.+| |     +|+|++.++++++..+.-
T Consensus       215 -g~~e~~~~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p~~~g~div~vg~~q~~G~P~~~GGP~~G~~a~~~~~~R~~PG  293 (471)
T d1wyub1         215 -GLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPV  293 (471)
T ss_dssp             -SCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCS
T ss_pred             -ccccchhhhhHHHHHhccccccccccchhhhhhccccCcccccccccccccccccccccccccccceeehhhhhccCCC
Confidence             55554   45554 57778888887532   22221110112678888899776 5     458999999988765421


Q ss_pred             CC-----Cccc-ccc-chhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          288 KT-----PLML-DYK-IHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       288 ~~-----p~~~-~~~-~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      ..     ..+. ... ...-.+....|-+.....++...+.++-. .|+.++.+++.+++.++.++|++ .|+++.. +.
T Consensus       294 RiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~-~GL~elA~~~~~~A~Yla~~L~~-~G~~~~~-~~  370 (471)
T d1wyub1         294 PLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGL-EGLKKAAALAVLNARYLKELLKE-KGYRVPY-DG  370 (471)
T ss_dssp             CEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-TTCBCSS-CS
T ss_pred             ceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCc-hhHHHHHHHHHHHHHHHHHHHhh-cCceecc-Cc
Confidence            10     0111 000 00001112234444444444445666654 48999999999999999999985 8988753 22


Q ss_pred             CCCccceEEEEcCCCchhH-HHHHHHHHcCCeecCC-CC--CCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          361 SVRSFMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKG-HR--SVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       361 ~~rs~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g-~~--~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..  -.-+++..+. +.+. ++.++|.++|+..... +.  ..+.+-|++.=-+|++|||+|+++|++++++
T Consensus       371 ~f--f~EFvv~~~~-~~~~~~i~k~L~~~G~~~~~~~~p~~~~~~llv~vTE~~tkedID~lv~aL~~i~~e  439 (471)
T d1wyub1         371 PS--MHEFVAQPPE-GFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK  439 (471)
T ss_dssp             SC--CSCEEEBCST-TCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred             ce--eeEEeecCCC-CCCHHHHHHHHHHcCCCCCcccCcCCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            21  1235555553 3344 6899999999864211 11  2346888888788999999999999998763

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.20  E-value=5.3e-09  Score=102.30  Aligned_cols=311  Identities=12%  Similarity=0.071  Sum_probs=171.9

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc------
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL------  154 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl------  154 (430)
                      -+|.|++++++.+.+..-...    ..+ .    ...+.+.+.++++.+.+   .+.+. .+++++++.++.-.      
T Consensus        56 ~~p~v~~Ai~~q~~~~~~~~~----~~~-~----~~~~~~~~~~~~~~~~~---~v~~~-~sgs~a~~~a~k~ar~~~~~  122 (404)
T d1z7da1          56 CHPNILNAMINQAKNLTICSR----AFF-S----VPLGICERYLTNLLGYD---KVLMM-NTGAEANETAYKLCRKWGYE  122 (404)
T ss_dssp             TCHHHHHHHHHHHTTCSCCCT----TSE-E----HHHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHhCCCccc----ccc-h----HHHHHHHHhhhhccccc---eeeee-ccccchHHHHHHHHHHHHhh
Confidence            388999999998865211100    111 1    23446667777887754   56665 78999998665321      


Q ss_pred             ---CCCC-CcEEEEeCChhHHHHHHHHHHhC----CceEEecCCCCcCCC--CCCccccc--c-CCCccEEEEeecCCCc
Q 043610          155 ---CTPN-DPVDYIVTGSWGDKAFKEAQKFC----NPQVIWSGKAEKYTK--IPNFDALE--Q-NPDAKYLHICANETIH  221 (430)
Q Consensus       155 ---~~~g-d~vl~~~~g~~~~~~~~~a~~~g----~~~~v~~~~~~~~g~--~~d~~~l~--i-~~~~~lv~i~~~~t~t  221 (430)
                         ...+ ..++....++.+.... .....+    .....+...  ....  ..+.+.++  + .+++.+|++=-+....
T Consensus       123 ~~~~~~~~~~~~~~~~~~hg~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~~  199 (404)
T d1z7da1         123 VKKIPENMAKIVVCKNNFSGRTLG-CISASTTKKCTSNFGPFAP--QFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEA  199 (404)
T ss_dssp             TSCCCTTCCEEEEETTC-----------------------------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTT
T ss_pred             cccccccccccccccccCCCCccc-ccccccccccccCCCCCCc--cccccccchHHHHHHHhcCCCEEEEEEEEEcCCC
Confidence               1122 2344444444332110 010111    000001000  0000  11223333  3 3456666664455666


Q ss_pred             cccCC--C----Cccc-cCCCcEEEEeccCc-CCC--Cccccccc----cEEEeCCCcccc---CCccEEEEEcHHHHhc
Q 043610          222 GVEFK--E----YPSA-KNSTGILVADMSSN-FCS--KPVDVTRF----GVIYAGAQKNVG---PSGVTIVIVRKDLLGN  284 (430)
Q Consensus       222 G~~~p--e----i~~~-~~~g~~lvvD~a~s-~G~--~~idl~~~----d~~~~s~~K~~g---p~G~g~l~v~~~~~~~  284 (430)
                      |.+.|  +    +.++ +++|+++++|+++. +|-  ..+-.+.+    |++  +..|.+|   ++ +|.+.+++++.+.
T Consensus       200 G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDiv--t~gK~l~gG~~p-~~~v~~~~~i~~~  276 (404)
T d1z7da1         200 GVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALSGGHYP-ISAVLANDDIMLV  276 (404)
T ss_dssp             TSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSC-CEEEEECHHHHTT
T ss_pred             CCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEE--EEcccccCCCCC-cccccchHHHHcc
Confidence            88777  2    4444 59999999999985 542  12222222    556  5678883   33 6899999999776


Q ss_pred             cCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc
Q 043610          285 AQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS  364 (430)
Q Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs  364 (430)
                      ..+   ..        .++++ +.|..+..++.++|+.+.++.-.+.+.+....+.+.+.+.+.+ .++-.   +-..+.
T Consensus       277 ~~~---~~--------~~~T~-~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~v~---~vrg~G  340 (404)
T d1z7da1         277 IKP---GE--------HGSTY-GGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKD-SKIVR---DVRGKG  340 (404)
T ss_dssp             CCT---TC--------CCCTT-TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTT-CTTEE---EEEEET
T ss_pred             CCC---CC--------cCcCC-CCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhc-CCCeE---EEEeeC
Confidence            432   11        11232 3466777888889998775443445555555565666665554 22211   000122


Q ss_pred             cceEEEEcCCCchhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHhh
Q 043610          365 FMNVPFTLEKSDLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH  429 (430)
Q Consensus       365 ~~iv~f~~~~~~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~~  429 (430)
                       .+..+.+.+..... ++..+|.++|+++.+..  ...||+++...+|++|++++++.|++.++..
T Consensus       341 -l~~~i~~~~~~~~~~~~~~~l~~~Gl~~~~~~--~~~ir~~Ppl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         341 -LLCAIEFKNELVNVLDICLKLKENGLITRDVH--DKTIRLTPPLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             -TEEEEEECTTTCCHHHHHHHHHHTTEECCEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             -cEEEEEEcCCcccHHHHHHHHHhCCeEEecCC--CCEEEEECCcCCCHHHHHHHHHHHHHHHHhh
Confidence             34556665433333 68888999999875421  2469999888889999999999999998753

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.20  E-value=3.6e-10  Score=109.69  Aligned_cols=199  Identities=15%  Similarity=0.109  Sum_probs=131.1

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCcEEEEeCChhHHH-HH-HHHHHhC-CceEEecCCCCc
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDPVDYIVTGSWGDK-AF-KEAQKFC-NPQVIWSGKAEK  193 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~vl~~~~g~~~~~-~~-~~a~~~g-~~~~v~~~~~~~  193 (430)
                      .+.+++.|+++-|..   ..+++ +||..|+..+ .+++++||++++....+.+.+ +. ....++| ++..+.      
T Consensus        57 ~~~lE~~la~LE~~~---~a~~~-sSGmaAi~~~-l~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~------  125 (393)
T d1n8pa_          57 RENLERAVAALENAQ---YGLAF-SSGSATTATI-LQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN------  125 (393)
T ss_dssp             HHHHHHHHHHHTTCS---EEEEE-SCHHHHHHHH-HHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES------
T ss_pred             HHHHHHHHHHHhCCc---eEEEe-cCchhHHHhh-hhcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee------
Confidence            447778899999875   34554 6788888654 567788999987766555432 21 1223446 544432      


Q ss_pred             CCCCCCccccc--cCCCccEEEEeecCCCccccCC--CCccc-c----CCCcEEEEeccCc--CCCCccccccccEEEeC
Q 043610          194 YTKIPNFDALE--QNPDAKYLHICANETIHGVEFK--EYPSA-K----NSTGILVADMSSN--FCSKPVDVTRFGVIYAG  262 (430)
Q Consensus       194 ~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p--ei~~~-~----~~g~~lvvD~a~s--~G~~~idl~~~d~~~~s  262 (430)
                          .+.++++  +++++++|++=.+.||+..+.|  .|+++ +    ++|++++||-+-+  +...|+++. .|+++.|
T Consensus       126 ----~~~~~~~~~i~~~t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP~~~~Pl~~G-ADiVvhS  200 (393)
T d1n8pa_         126 ----DLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFG-ADIVVHS  200 (393)
T ss_dssp             ----SHHHHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGT-CSEEEEE
T ss_pred             ----cchHHHHHHhhhhcceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCcccCCchhhC-CCEEEEc
Confidence                1234565  7899999999999999999999  56664 3    7899999999843  455677663 4999999


Q ss_pred             CCccccCCc---cEEEEEcH-HHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 043610          263 AQKNVGPSG---VTIVIVRK-DLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRK  338 (430)
Q Consensus       263 ~~K~~gp~G---~g~l~v~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~  338 (430)
                      ..|+++-.|   .|.++.++ ++.+++..       +..     ....+++....+.+...|+      -+..+.+++.+
T Consensus       201 ~TKyi~GhsDv~~G~v~~~~~~~~~~l~~-------~~~-----~~G~~~~p~~a~ll~rgl~------Tl~lR~~~~~~  262 (393)
T d1n8pa_         201 ATKYINGHSDVVLGVLATNNKPLYERLQF-------LQN-----AIGAIPSPFDAWLTHRGLK------TLHLRVRQAAL  262 (393)
T ss_dssp             TTTTTTCSSCCCCEEEEESCHHHHHHHHH-------HHH-----HHCCCCCHHHHHHHHHHHT------THHHHHHHHHH
T ss_pred             cccccCCCCccccceeeecchhHHHHHHH-------HHh-----hcCCCCChHHHHHHHhCCc------chhhHHHHHHH
Confidence            999994323   46555554 34443311       000     0123556555555544443      45677788888


Q ss_pred             HHHHHHHHHHc
Q 043610          339 KAELLYNVIDG  349 (430)
Q Consensus       339 l~~~l~~~l~~  349 (430)
                      .+..+.++|.+
T Consensus       263 nA~~lA~~L~~  273 (393)
T d1n8pa_         263 SANKIAEFLAA  273 (393)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHHh
Confidence            88889999964

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.18  E-value=2.3e-11  Score=121.64  Aligned_cols=291  Identities=11%  Similarity=-0.001  Sum_probs=156.5

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCc------EEEEeCChhHHHHHHHHHHhC-CceEEecC
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDP------VDYIVTGSWGDKAFKEAQKFC-NPQVIWSG  189 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~------vl~~~~g~~~~~~~~~a~~~g-~~~~v~~~  189 (430)
                      +.++++.+++++|.+   .++++ +|||+|++.++..+.++|++      ..+..+.++... .......| .+..+...
T Consensus        77 ~~~le~~~a~l~g~~---~~~~~-~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~-~~~~~~~g~~~~~~~~~  151 (465)
T d1ax4a_          77 YYDLKDKAKELFNYD---YIIPA-HQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTT-AAHVELNGCKAINIVTE  151 (465)
T ss_dssp             HHHHHHHHHHHHCCC---EEEEE-SSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHH-HHHHHHTTCEEEECBCG
T ss_pred             HHHHHHHHHHHHCCC---EEEEC-CCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhh-HHHHHHcCCeeeccccc
Confidence            446778899999985   57776 78999999988887544332      223344444321 11223334 33322211


Q ss_pred             C------CCcCCCCCCccccc--cC---C-CccEEEEeecCCCcccc-CC-----CCccc-cCCCcEEEEeccCcCCCCc
Q 043610          190 K------AEKYTKIPNFDALE--QN---P-DAKYLHICANETIHGVE-FK-----EYPSA-KNSTGILVADMSSNFCSKP  250 (430)
Q Consensus       190 ~------~~~~g~~~d~~~l~--i~---~-~~~lv~i~~~~t~tG~~-~p-----ei~~~-~~~g~~lvvD~a~s~G~~~  250 (430)
                      .      ..+....+|+++++  +.   + .+.++++...++..|.. .+     +|.++ +++|+++++|+++..|...
T Consensus       152 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~  231 (465)
T d1ax4a_         152 KAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAY  231 (465)
T ss_dssp             GGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHH
T ss_pred             ccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEEECcchhhhhc
Confidence            0      00112245777776  32   2 34455555555554443 44     35554 6999999999998654221


Q ss_pred             ------------------ccccc-ccEEEeCCCccccCCccEEEEEcHHHH--hccCCCCCccccccchhhcCCCCCCcc
Q 043610          251 ------------------VDVTR-FGVIYAGAQKNVGPSGVTIVIVRKDLL--GNAQDKTPLMLDYKIHDENNSLYNTPP  309 (430)
Q Consensus       251 ------------------idl~~-~d~~~~s~~K~~gp~G~g~l~v~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~T~~  309 (430)
                                        .|+-. .|++++|.+|..+++|.|+++.+++..  ........       .......++...
T Consensus       232 ~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~~~~~g~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~  304 (465)
T d1ax4a_         232 FIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCV-------PMEGFVTYGGLA  304 (465)
T ss_dssp             HHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSCEEEEESSCHHHHHHHHHHHH-------HHTCSTTTTTCC
T ss_pred             ccccccccccccchhhhccccccccceeEeecccCcccccceeEeecchHHHHHhhhcccc-------ccccCCCcchhh
Confidence                              01112 268999999999766669998875421  11100000       001111223333


Q ss_pred             HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEc----CC---CchhH-HH
Q 043610          310 CYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTL----EK---SDLEA-EF  381 (430)
Q Consensus       310 ~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~----~~---~~~~~-~~  381 (430)
                      ...+.++...++.   . ..+...++..+..+++.+.|.+ .|+.+.. ..  .... +.+..    +.   ..... .+
T Consensus       305 ~~~~~a~~~~~~e---~-~~~~~~~~~~~~~~~l~~~L~~-~g~~~v~-~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~  375 (465)
T d1ax4a_         305 GRDMAAMVQGLEE---G-TEEEYLHYRIGQVKYLGDRLRE-AGIPIQY-PT--GGHA-VFVDCKKLVPQIPGDQFPAQAV  375 (465)
T ss_dssp             HHHHHHHHHHHHH---T-TCHHHHHHHHHHHHHHHHHHHH-TTCCBCS-SC--CSSE-EEEESTTTCTTSCGGGCHHHHH
T ss_pred             HHHHHHHhhhhHH---h-hhHHHHHHHHHHHHHHHHHHHh-hcCcccc-CC--Ccce-eeeehhhhcCCCccccchhHHH
Confidence            3333333333322   1 2244555556677899999986 6776553 11  2222 22222    11   11112 33


Q ss_pred             H-HHHHHcCCeecC------------CCC---CCCeeEEeec-CCCCHHHHHHHHHHHHHHHHh
Q 043610          382 V-KEAAKEKMVQLK------------GHR---SVGGMRASIY-NAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       382 ~-~~L~~~Gi~~~~------------g~~---~~g~iRis~~-~~~t~edv~~ll~~L~~~~~~  428 (430)
                      . +.+.+.||....            |..   ..+.+|+++. ...|+||||+++++|+++.++
T Consensus       376 ~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~~  439 (465)
T d1ax4a_         376 INALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK  439 (465)
T ss_dssp             HHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred             HHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            3 345667876421            111   1246999864 345899999999999998653

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.7e-09  Score=105.88  Aligned_cols=310  Identities=12%  Similarity=0.067  Sum_probs=177.1

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc------
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL------  154 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl------  154 (430)
                      -+|.|++++.+.+++....+..   ..  .    ....++.+.+.++.+..   .+.+. .||++|++.++.-.      
T Consensus        58 ~~p~i~~Av~~q~~~~~~~~~~---~~--~----~~~~~~~~~~~~~~~~~---~v~~~-~sGseA~e~Aik~ar~~~~~  124 (404)
T d2byla1          58 CHPKIVNALKSQVDKLTLTSRA---FY--N----NVLGEYEEYITKLFNYH---KVLPM-NTGVEAGETACKLARKWGYT  124 (404)
T ss_dssp             TCHHHHHHHHHHHTTCCCCCTT---EE--E----SSHHHHHHHHHHHHTCS---EEEEE-SSHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhhCCCcccc---cc--c----chHHHHHHhhhhccccc---ccccc-cCccccchhHHHHHHHHhhh
Confidence            4789999999988753211110   11  1    12335556777777653   67665 78999999876442      


Q ss_pred             ---CCCC-CcEEEEeCChhHHHHHHHHHHhCCceE----EecCCCCcCCCCCCccccc--c-CCCccEEEEeecCCCccc
Q 043610          155 ---CTPN-DPVDYIVTGSWGDKAFKEAQKFCNPQV----IWSGKAEKYTKIPNFDALE--Q-NPDAKYLHICANETIHGV  223 (430)
Q Consensus       155 ---~~~g-d~vl~~~~g~~~~~~~~~a~~~g~~~~----v~~~~~~~~g~~~d~~~l~--i-~~~~~lv~i~~~~t~tG~  223 (430)
                         ...+ ..++....++.+... ......+....    .+.......-...|+++++  + .++..+|++--+....|.
T Consensus       125 ~~~~~~~~~~i~~~~~~~hg~t~-~~~~~~~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~l~~~~iAaviiEPi~g~~G~  203 (404)
T d2byla1         125 VKGIQKYKAKIVFAAGNFWGRTL-SAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGV  203 (404)
T ss_dssp             TTCCCTTCCEEEEETTCCCCCSH-HHHTTCCCHHHHTTSCSCCTTEEEECTTCHHHHHHHHTSTTEEEEEECSSBTTTTS
T ss_pred             ccccccccccccccCCCcccccc-ceeccCCCcccccCCCCCCCCeeEecccCHHHHHHhcCCCCeEEEEECCccCCCCC
Confidence               1123 344444433333211 10000000000    0000000000013445565  3 455666666444556687


Q ss_pred             cCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCcccc--CCccEEEEEcHHHHhccCC
Q 043610          224 EFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQKNVG--PSGVTIVIVRKDLLGNAQD  287 (430)
Q Consensus       224 ~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K~~g--p~G~g~l~v~~~~~~~~~~  287 (430)
                      +.+      ++.++ +++|+++++|+++. +|-.  .+-.+.+    |++  +..|.+|  ..=+|.+++++++.+...+
T Consensus       204 ~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~--~~gK~l~gG~~p~~av~~~~~i~~~~~~  281 (404)
T d2byla1         204 VVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSGGLYPVSAVLCDDDIMLTIKP  281 (404)
T ss_dssp             BCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCEEEEECHHHHTTSCT
T ss_pred             ccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCEE--EECchhhCCCccceeeeechhhhhccCC
Confidence            766      24444 69999999999986 4432  1222222    655  6678883  2226889999998765432


Q ss_pred             CCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc-cc
Q 043610          288 KTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS-FM  366 (430)
Q Consensus       288 ~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs-~~  366 (430)
                         ..        .++++ +-|..+..++.++|+.+.+    +.+.++..++..++++.|.+... ..+.   +.|. ..
T Consensus       282 ---~~--------~~~T~-~gnpl~~aaa~a~L~~i~~----~~l~~~~~~~g~~l~~~l~~l~~-~~i~---~vRg~Gl  341 (404)
T d2byla1         282 ---GE--------HFSTY-GGNPLGCRVAIAALEVLEE----ENLAENADKLGIILRNELMKLPS-DVVT---AVRGKGL  341 (404)
T ss_dssp             ---TS--------SCCSS-TTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHTSCT-TTEE---EEEEETT
T ss_pred             ---CC--------CCcCC-CcCHHHHHHHHHHHHHHHh----cCchhhhhHhhHHHHHHHHhhcc-ccce---eeeeccc
Confidence               11        11232 3466778888899998875    34666777778888888886321 1110   1121 12


Q ss_pred             eEEEEcCCC-chhH-HHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          367 NVPFTLEKS-DLEA-EFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       367 iv~f~~~~~-~~~~-~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      +..+.+.+. .... ++.++|.++|+++.+..  .+.||+++....|++|||+++++|++.++.
T Consensus       342 ~~~i~~~~~~~~~~~~~~~~l~~~Gvl~~~~~--~~~i~l~PpL~it~~~id~~~~~l~~al~~  403 (404)
T d2byla1         342 LNAIVIKETKDWDAWKVCLRLRDNGLLAKPTH--GDIIRFAPPLVIKEDELRESIEIINKTILS  403 (404)
T ss_dssp             EEEEEECCCSSCCHHHHHHHHHHTTEECEEEE--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEecCCchhHHHHHHHHHhCCeEEecCC--CCEEEEECCcCCCHHHHHHHHHHHHHHHHc
Confidence            344555431 2223 68889999999876421  236999998888999999999999998864

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.10  E-value=7.4e-09  Score=101.90  Aligned_cols=318  Identities=11%  Similarity=0.004  Sum_probs=169.4

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g  158 (430)
                      -+|.|++++.+.+.+......  ...  ..    +...++.+.|.+++.-...+.+++ ++||++|++.++.-.  ....
T Consensus        57 ~~p~i~~ai~~q~~~~~~~~~--~~~--~~----~~~~~la~~l~~~~p~~~~~~v~f-~~sGseA~e~Alk~ar~~t~r  127 (425)
T d1sffa_          57 LHPKVVAAVEAQLKKLSHTCF--QVL--AY----EPYLELCEIMNQKVPGDFAKKTLL-VTTGSEAVENAVKIARAATKR  127 (425)
T ss_dssp             TCHHHHHHHHHHTTTCSCCCT--TTE--EC----HHHHHHHHHHHHHSSCSSCEEEEE-ESSHHHHHHHHHHHHHHHHTC
T ss_pred             CcHHHHHHHHHHHhhcCCccc--ccc--cC----cHHHHHHHHHHhhhhhcccceeee-eccccchhhhHHHHhhhhhcc
Confidence            478999999998865221110  001  11    222355566677775432225555 588999999876543  1234


Q ss_pred             CcEEEEeCChhHHHHHHHHHHhCCc------------eEEecCCCCcCCCCCCc------ccc-c---cCCCccEEEEee
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKFCNP------------QVIWSGKAEKYTKIPNF------DAL-E---QNPDAKYLHICA  216 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~g~~------------~~v~~~~~~~~g~~~d~------~~l-~---i~~~~~lv~i~~  216 (430)
                      .+++.+..++.|....... ..|..            .......+.........      +++ +   ...++..|++--
T Consensus       128 ~~ii~~~~~yHG~t~~~~~-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vaavi~EP  206 (425)
T d1sffa_         128 SGTIAFSGAYHGRTHYTLA-LTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEP  206 (425)
T ss_dssp             CEEEEETTCCCCSSHHHHH-HSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECS
T ss_pred             cceEeecCCCcCccccchh-hcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhcccccceEEEEecC
Confidence            5666665555442111111 11100            00100000000000000      001 1   123455566654


Q ss_pred             cCCCccccCC------CCccc-cCCCcEEEEeccCcC-CCC--cccccc----ccEEEeCCCcccc--CCccEEEEEcHH
Q 043610          217 NETIHGVEFK------EYPSA-KNSTGILVADMSSNF-CSK--PVDVTR----FGVIYAGAQKNVG--PSGVTIVIVRKD  280 (430)
Q Consensus       217 ~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s~-G~~--~idl~~----~d~~~~s~~K~~g--p~G~g~l~v~~~  280 (430)
                      +....|+..+      .|.++ +++|+++|+|++++. |-.  ..-.+.    -|+++  ..|.+|  .| +|.+.++++
T Consensus       207 i~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~~--~gK~l~gG~P-~~av~~~~~  283 (425)
T d1sffa_         207 VQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTT--FAKSIAGGFP-LAGVTGRAE  283 (425)
T ss_dssp             BCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEE--ECGGGGTSSC-CEEEEEEHH
T ss_pred             ccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCcccee--cccccCCCcc-eEEEEEcHH
Confidence            5566787766      24454 699999999999873 321  111111    26555  668883  43 788899999


Q ss_pred             HHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCC
Q 043610          281 LLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEK  360 (430)
Q Consensus       281 ~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~  360 (430)
                      +.+...+.   .        .++++ +-+..++.++.++|+.+.+..-++.+.+.-..+.+.+.+.+++ .++... +  
T Consensus       284 i~~~~~~~---~--------~~~T~-~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~-~~~v~~-v--  347 (425)
T d1sffa_         284 VMDAVAPG---G--------LGGTY-AGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEK-HPEIGD-V--  347 (425)
T ss_dssp             HHTTSCTT---S--------BCCSS-SSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT-CTTEEE-E--
T ss_pred             HHHhhCCC---C--------CCCCC-CcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHhh-CCceEE-E--
Confidence            87754321   1        12333 4566788888899998875322333333333344444444443 222110 0  


Q ss_pred             CCCccceEEEEcCC--------CchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          361 SVRSFMNVPFTLEK--------SDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       361 ~~rs~~iv~f~~~~--------~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .... ..+.+.+.+        ......+.++|.++|+++.+.....+.||+++...+|++||++++++|++.+++
T Consensus       348 rg~G-l~~~i~f~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~g~~~n~i~~~PpL~it~~eid~~l~~l~~al~e  422 (425)
T d1sffa_         348 RGLG-AMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDE  422 (425)
T ss_dssp             EEET-TEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             Eccc-cEEEEEEeccCccCCccHHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            0112 234444321        011225777888999987653223357999998889999999999999998875

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.10  E-value=7.5e-09  Score=101.96  Aligned_cols=329  Identities=8%  Similarity=-0.046  Sum_probs=181.8

Q ss_pred             CCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCc
Q 043610           68 EDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGG  142 (430)
Q Consensus        68 ~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~g  142 (430)
                      .++.+.+..|-.     =-+|.|++++.+++.+.....     .+....   +...++.+.+.+....+.+ .+.|. .|
T Consensus        42 G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~-----~~~~~~---~~~~~l~~~l~~~~~~~~~-~v~f~-~s  111 (429)
T d1s0aa_          42 GRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM-----FGGITH---APAIELCRKLVAMTPQPLE-CVFLA-DS  111 (429)
T ss_dssp             SCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCC-----CSSEEC---HHHHHHHHHHHHHSCTTCC-EEEEE-SS
T ss_pred             CCEEEECcccHHHHhhcCCcHHHHHHHHHHHHhcCCcc-----cCCccc---hHHHHHHHHHHhhhccCcc-eeeec-cc
Confidence            344445555532     248899999999886521100     011111   1122444556666665544 66665 78


Q ss_pred             HHHHHHHHHhhcC-------CCCCcEEEEeCChhHHHHHHHHHHh-C--------------CceEEecCCCCcCCCCCCc
Q 043610          143 ATTQFAAVPLNLC-------TPNDPVDYIVTGSWGDKAFKEAQKF-C--------------NPQVIWSGKAEKYTKIPNF  200 (430)
Q Consensus       143 aT~a~~~~~~sl~-------~~gd~vl~~~~g~~~~~~~~~a~~~-g--------------~~~~v~~~~~~~~g~~~d~  200 (430)
                      +++|++.++.-..       .++.+++.+..++.|.-..  +... +              .....+.... ......+.
T Consensus       112 GseA~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~--a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  188 (429)
T d1s0aa_         112 GSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFG--AMSVCDPDNSMHSLWKGYLPENLFAPAPQS-RMDGEWDE  188 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHH--HHTTSCTTTTTGGGGTTTSCCCEEECCCCS-BC-CCCCG
T ss_pred             cccchhhhhhhhhheeecccccccEEEEecCCccccchh--hhhhcCCccccccccCcccccccccccccc-ccccccch
Confidence            9999997654321       2334666666555442110  1110 0              1111111110 11112222


Q ss_pred             ccc---c-----cCCCccEEEEeecC-CCccccCC------CCccc-cCCCcEEEEeccCc-CCCCc--cccccc----c
Q 043610          201 DAL---E-----QNPDAKYLHICANE-TIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSKP--VDVTRF----G  257 (430)
Q Consensus       201 ~~l---~-----i~~~~~lv~i~~~~-t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~~--idl~~~----d  257 (430)
                      +.+   +     ..+++..|++--+. +..|...+      .|.++ +++|+++|+|+++. +|-.-  .-.+.+    |
T Consensus       189 ~~~~~~~~~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PD  268 (429)
T d1s0aa_         189 RDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPD  268 (429)
T ss_dssp             GGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCS
T ss_pred             hhhhhhhhhhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhccccccccccccccccceeccc
Confidence            222   2     13445555554332 33355443      35554 68999999999987 43321  112222    5


Q ss_pred             EEEeCCCccc--cCCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 043610          258 VIYAGAQKNV--GPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKM  335 (430)
Q Consensus       258 ~~~~s~~K~~--gp~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~  335 (430)
                      +++.  .|.+  |..-++.+.+++++.+...+.....+      ..+.+ ++.+..+..++.++|+.+++    +++.++
T Consensus       269 i~~~--gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~------~~~~T-~~gnp~~~aaa~a~L~~i~~----~~~~~~  335 (429)
T d1s0aa_         269 ILCL--GKALTGGTMTLSATLTTREVAETISNGEAGCF------MHGPT-FMGNPLACAAANASLAILES----GDWQQQ  335 (429)
T ss_dssp             EEEE--CGGGGTSSSCCEEEEECHHHHHHHHTSTTSSC------SCCCT-TTTCHHHHHHHHHHHHHHHT----CHHHHH
T ss_pred             cccc--ccccccccccccchhhHHHHHhccCCCCCcce------eecCC-CCCCcccchhhhcccccccc----ccccch
Confidence            5554  4777  33337889999988765422110000      01122 24566788888899998864    367788


Q ss_pred             HHHHHHHHHHHHHccCCceecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHH
Q 043610          336 NRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGV  415 (430)
Q Consensus       336 ~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv  415 (430)
                      .+++.++++++|.+......+. +-..+. ....+.+.......++.+.+.++|+++.+..   +.||+++....|++||
T Consensus       336 ~~~~g~~l~~~L~~l~~~~~v~-~vrg~G-l~~~~e~~~~~~~~~~~~~~~~~Gl~~~~~g---~~i~~~Ppl~it~~ei  410 (429)
T d1s0aa_         336 VADIEVQLREQLAPARDAEMVA-DVRVLG-AIGVVETTHPVNMAALQKFFVEQGVWIRPFG---KLIYLMPPYIILPQQL  410 (429)
T ss_dssp             HHHHHHHHHHHHGGGGGCTTEE-EEEEET-TEEEEEESSCBCHHHHHHHHHHTTEECCCBT---TEEEECCCTTCCHHHH
T ss_pred             hhHHHHHHHHHHHHhccCCceE-EEeecc-cEEEEEecCcccHHHHHHHHHHCCcEEEecC---CEEEEeCCcCCCHHHH
Confidence            8888889999997632111110 111122 3455666543334478888999999876422   3699999888899999


Q ss_pred             HHHHHHHHHHHH
Q 043610          416 EKLVAFMKDFQA  427 (430)
Q Consensus       416 ~~ll~~L~~~~~  427 (430)
                      |+++++|++.++
T Consensus       411 d~~~~~l~~al~  422 (429)
T d1s0aa_         411 QRLTAAVNRAVQ  422 (429)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHH
Confidence            999999998765

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.10  E-value=1.1e-10  Score=116.56  Aligned_cols=294  Identities=9%  Similarity=0.004  Sum_probs=162.8

Q ss_pred             HHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhcCCCCCc--------EEEEeCChhHHHHHHHHHHhC-CceEEe
Q 043610          117 IEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNLCTPNDP--------VDYIVTGSWGDKAFKEAQKFC-NPQVIW  187 (430)
Q Consensus       117 ~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl~~~gd~--------vl~~~~g~~~~~~~~~a~~~g-~~~~v~  187 (430)
                      +.++++.+++++|.+   .++++ +|||+|+..++..++++||+        .+++.+.++.... ..+...| .++.+.
T Consensus        76 ~~~le~~~a~l~G~~---~~~~~-~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~G~~~~~~~  150 (467)
T d2v1pa1          76 YYALAESVKNIFGYQ---YTIPT-HQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQ-GHSQINGCTVRNVY  150 (467)
T ss_dssp             HHHHHHHHHHHTCCS---EEEEE-CSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHH-HHHHHTTCEEEECB
T ss_pred             HHHHHHHHHHHHCCC---EEEEC-CCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccH-HHHHHcCCeeeecc
Confidence            347778999999987   46665 68899999988887655443        3445566654321 1233445 555554


Q ss_pred             cCCCC------cCCCCCCccccc--c---C-CCccEEEEeecCCCc-cccCC-----CCccc-cCCCcEEEEeccCcCCC
Q 043610          188 SGKAE------KYTKIPNFDALE--Q---N-PDAKYLHICANETIH-GVEFK-----EYPSA-KNSTGILVADMSSNFCS  248 (430)
Q Consensus       188 ~~~~~------~~g~~~d~~~l~--i---~-~~~~lv~i~~~~t~t-G~~~p-----ei~~~-~~~g~~lvvD~a~s~G~  248 (430)
                      .....      ......|+++++  +   . +.+.++++...++.. |...|     +|.++ +++|+++++|+++.+|.
T Consensus       151 ~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l~~D~a~~~~~  230 (467)
T d2v1pa1         151 IKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAEN  230 (467)
T ss_dssp             CTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHH
T ss_pred             cccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEEEEechhhhcc
Confidence            42110      011135666665  3   2 346677776665554 44455     35555 69999999999987543


Q ss_pred             Cc-----------cc--------cccccEEEeCCCcccc-CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCc
Q 043610          249 KP-----------VD--------VTRFGVIYAGAQKNVG-PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTP  308 (430)
Q Consensus       249 ~~-----------id--------l~~~d~~~~s~~K~~g-p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~  308 (430)
                      ..           ..        ....|++.++.||.++ |.| |++..+++.+.......   .........+...+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~g-g~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  306 (467)
T d2v1pa1         231 AYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTEC---RTLCVVQEGFPTYGGL  306 (467)
T ss_dssp             HHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHHH---HHHHHHTTSSCCCCCC
T ss_pred             ccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCCc-eeEEecchhhhhHHHhh---cccccccccCcchhhh
Confidence            21           11        1234799999999996 655 88877765433210000   0000000111222334


Q ss_pred             cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCccceEEE---EcCCC---chhH-H-
Q 043610          309 PCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRSFMNVPF---TLEKS---DLEA-E-  380 (430)
Q Consensus       309 ~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs~~iv~f---~~~~~---~~~~-~-  380 (430)
                      +...+.++...++..    ..++..++..+..+++.++|.+ .|..+.+..    .......   .++..   +... . 
T Consensus       307 ~~~~~~a~~~~~~~~----~~~~~~~~~~~~~~~l~~~L~~-~~~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  377 (467)
T d2v1pa1         307 EGGAMERLAVGLYDG----MNLDWLAYRIAQVQYLVDGLEE-IGVVCQQAG----GHAAFVDAGKLLPHIPADQFPAQAL  377 (467)
T ss_dssp             CHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHHH-TTCCEEEEC----SSCEEEEHHHHSTTSCGGGCHHHHH
T ss_pred             HHHHHHHHHHHhHHh----hhHHHHHHHHHHHHHHHHHHHh-cCCcccCCC----ccceeecchhhcCCcchhhhhhHHH
Confidence            444444444444422    2245556667788899999987 555443211    1111110   11211   1111 2 


Q ss_pred             HHHHHHHcCCeecC------------CC---CCCCeeEEeecC-CCCHHHHHHHHHHHHHHHHh
Q 043610          381 FVKEAAKEKMVQLK------------GH---RSVGGMRASIYN-AMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       381 ~~~~L~~~Gi~~~~------------g~---~~~g~iRis~~~-~~t~edv~~ll~~L~~~~~~  428 (430)
                      ..+.+.+.||....            +.   .....+|+++.. ..|+||||.++++|+++.++
T Consensus       378 ~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~~~  441 (467)
T d2v1pa1         378 ACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_dssp             HHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence            33345677876321            10   012369999753 46999999999999998763

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.06  E-value=7.1e-09  Score=102.13  Aligned_cols=325  Identities=12%  Similarity=0.040  Sum_probs=168.2

Q ss_pred             CCCCCceeecCCCC-----CCcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEe
Q 043610           66 GQEDRVFNFAAGPA-----NLPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQ  140 (430)
Q Consensus        66 ~~~~~~~l~~~gp~-----~~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~  140 (430)
                      ...++.+.+..|-.     --+|+|++++++.+.+.    ..   ... ...   ....+.+.+.++..-. + .+.|. 
T Consensus        49 ~~G~~ylD~~~~~~~~~lGh~hp~i~~ai~~~~~~~----~~---~~~-~~~---~~~~la~~~~~~~~~~-~-~v~f~-  114 (427)
T d2gsaa_          49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKG----TS---FGA-PCA---LENVLAEMVNDAVPSI-E-MVRFV-  114 (427)
T ss_dssp             TTSCEEEESSGGGTTTTTCBTCHHHHHHHHHHHTTC----SC---CSS-CCH---HHHHHHHHHHHHSTTC-S-EEEEE-
T ss_pred             CCCCEEEEechhHHHHhccCCcHHHHHHHHHHHHhc----Cc---ccc-chh---HHHHHHHHHHhhCCcc-c-ccccc-
Confidence            33444555544422     23789999999988641    10   011 111   2234555666665433 2 66665 


Q ss_pred             CcHHHHHHHHHhhc--CCCCCcEEEEeCChhHHHHH------HHHHHhCCce---EE-ecCCCCcCCCCCCccccc--cC
Q 043610          141 GGATTQFAAVPLNL--CTPNDPVDYIVTGSWGDKAF------KEAQKFCNPQ---VI-WSGKAEKYTKIPNFDALE--QN  206 (430)
Q Consensus       141 ~gaT~a~~~~~~sl--~~~gd~vl~~~~g~~~~~~~------~~a~~~g~~~---~v-~~~~~~~~g~~~d~~~l~--i~  206 (430)
                      +||++|++.++.-.  .....+|+.+..++.|.-..      ....+.+...   +. +...+...-...|+++++  +.
T Consensus       115 ~sGseA~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~~~  194 (427)
T d2gsaa_         115 NSGTEACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFA  194 (427)
T ss_dssp             SSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEECTTCHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccCcchHHHHHHHHH
Confidence            78999999886643  23345666665555431000      0001111000   00 000000000012445555  33


Q ss_pred             ---CCccEEEEeecCCCccccCC--C----Cccc-cCCCcEEEEeccCcCC-CCc-ccccc----ccEEEeCCCccc--c
Q 043610          207 ---PDAKYLHICANETIHGVEFK--E----YPSA-KNSTGILVADMSSNFC-SKP-VDVTR----FGVIYAGAQKNV--G  268 (430)
Q Consensus       207 ---~~~~lv~i~~~~t~tG~~~p--e----i~~~-~~~g~~lvvD~a~s~G-~~~-idl~~----~d~~~~s~~K~~--g  268 (430)
                         .+...|++--.....|++.|  +    |.++ +++|+++|+|+++... .-. .-.+.    -|+++.+  |.+  |
T Consensus       195 ~~~~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~g~~~~~~~~gi~PDi~~~g--K~lggG  272 (427)
T d2gsaa_         195 ENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRIAYGGVQEKFGVTPDLTTLG--KIIGGG  272 (427)
T ss_dssp             TSTTTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTCHHHHTTCCCSEEEEC--GGGGTT
T ss_pred             hCCCCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccceecccchHHhcCCCHHHHhhh--hccCCC
Confidence               34556666555666788877  2    4444 5999999999998632 111 11111    2666654  556  4


Q ss_pred             CCccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Q 043610          269 PSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVID  348 (430)
Q Consensus       269 p~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~  348 (430)
                      .+ +|.+++++++.+...+..+.+        .+++ ++.|..+.+++.++|+.+.+.    .+.++.+++.+++++.|.
T Consensus       273 ~p-~~a~~~~~~i~~~~~~~~~~~--------~~~T-~~gnpla~AAala~Le~i~~~----~l~~~~~~~g~~l~~~L~  338 (427)
T d2gsaa_         273 LP-VGAYGGKREIMQLVAPAGPMY--------QAGT-LSGNPLAMTAGIKTLELLRQP----GTYEYLDQITKRLSDGLL  338 (427)
T ss_dssp             SC-CEEEEECHHHHTTBTTTSSBC--------CCCT-TTTCHHHHHHHHHHHHHHTST----THHHHHHHHHHHHHHHHH
T ss_pred             cc-eeeeeehHHHHHHhcccCCCc--------CCCC-CCCCchhhHHHHHhhHHhhhh----hHHhhhhHHHHHHHHHHH
Confidence            33 355778999887654321111        1223 245677888888999988642    344555555555555554


Q ss_pred             cc---CCceecCCCCCCCccceEEEEcCC-----------Cchh--HHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCH
Q 043610          349 GS---NGFYKCPVEKSVRSFMNVPFTLEK-----------SDLE--AEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPL  412 (430)
Q Consensus       349 ~~---~G~~~~~~~~~~rs~~iv~f~~~~-----------~~~~--~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~  412 (430)
                      +.   .++....  ...++  .+.+.+..           ...+  ..|...|.++||+..++..    .++-+...+|+
T Consensus       339 ~l~~~~~~~~~v--~~~gg--m~~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll~~Gv~l~p~~~----~~~~~~l~~Te  410 (427)
T d2gsaa_         339 AIAQETGHAACG--GQVSG--MFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF----EAGFTSLAHTE  410 (427)
T ss_dssp             HHHHHTTCCCEE--EEETT--EEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT----SCEECCTTCCH
T ss_pred             HHHhhcCCCcEE--cccCC--eEEEEEeccCCCCHHHhhcccHHHHHHHHHHHHHCCEEECCCCC----cceeCCCCCCH
Confidence            31   2322110  01122  22332211           0111  1366677788998765432    22224456799


Q ss_pred             HHHHHHHHHHHHHHHh
Q 043610          413 AGVEKLVAFMKDFQAK  428 (430)
Q Consensus       413 edv~~ll~~L~~~~~~  428 (430)
                      +|||+++++|++.+++
T Consensus       411 ~dId~~l~al~~al~~  426 (427)
T d2gsaa_         411 EDIDATLAAARTVMSA  426 (427)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998763

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.05  E-value=1.5e-09  Score=105.67  Aligned_cols=307  Identities=10%  Similarity=0.053  Sum_probs=171.4

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g  158 (430)
                      -.|+|.+++.+.+.+....+.      ....+   ...++.+.+.+......+ .+.+ +.||++|++.++.-.  ....
T Consensus        54 ~hp~v~~a~~~~~~~~~~~~~------~~~~~---~~~~la~~l~~~~~~~~~-~v~f-~~sGseA~e~Aik~Ar~~t~r  122 (387)
T d1vefa1          54 GNPEVVEAVKRQAETLMAMPQ------TLPTP---MRGEFYRTLTAILPPELN-RVFP-VNSGTEANEAALKFARAHTGR  122 (387)
T ss_dssp             TCHHHHHHHHHHHHHCCCCCT------TSCCH---HHHHHHHHHHHTSCTTEE-EEEE-ESSHHHHHHHHHHHHHHHHSC
T ss_pred             CcHHHHHHHHHHHHhhccccc------ccCCc---hHHHHHHHhhhhccccce-eecc-ccCchHHHHHHHHHHHhhccc
Confidence            478999999998875321111      11111   122333344444333322 4555 578999999876653  2334


Q ss_pred             CcEEEEeCChhHHHHHHHHHHhCCce----EEecCCCCcCCCCCCccccc--cCCCccEEEEeecCCCccccCC------
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKFCNPQ----VIWSGKAEKYTKIPNFDALE--QNPDAKYLHICANETIHGVEFK------  226 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~g~~~----~v~~~~~~~~g~~~d~~~l~--i~~~~~lv~i~~~~t~tG~~~p------  226 (430)
                      ..|+....++.|.-..... ..|...    ..+...+...-...|.++++  +.+++..|++--+....|+..+      
T Consensus       123 ~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~iAavi~EPi~g~~G~~~~~~~~l~  201 (387)
T d1vefa1         123 KKFVAAMRGFSGRTMGSLS-VTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLR  201 (387)
T ss_dssp             CEEEEETTCCCCSSHHHHH-TCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHH
T ss_pred             ceecccccCCCCCccceEe-ccCCccccCCCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEECCCCCCCCccCCHHHHH
Confidence            5666666555442111000 001000    00000000000013456666  6677777777444555677766      


Q ss_pred             CCccc-cCCCcEEEEeccCc-CCCCc-------cccccccEEEeCCCccc--cCCccEEEEEcHHHHhccCCCCCccccc
Q 043610          227 EYPSA-KNSTGILVADMSSN-FCSKP-------VDVTRFGVIYAGAQKNV--GPSGVTIVIVRKDLLGNAQDKTPLMLDY  295 (430)
Q Consensus       227 ei~~~-~~~g~~lvvD~a~s-~G~~~-------idl~~~d~~~~s~~K~~--gp~G~g~l~v~~~~~~~~~~~~p~~~~~  295 (430)
                      ++.++ +++|+++|+|++++ +|-.-       .+++ -|+++.  .|.+  |.+ ++.+..+++..+...+   ..   
T Consensus       202 ~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~-PDi~~~--gK~l~gG~~-~~~~~~~~~~~~~~~~---~~---  271 (387)
T d1vefa1         202 AAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIV-PDILTL--AKALGGGVP-LGVAVMREEVARSMPK---GG---  271 (387)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCC-CSEEEE--CGGGGTTSS-CEEEEEEHHHHHTSCT---TS---
T ss_pred             HHHHHHHHcCceEEecccccccCccCCCcccccCCcC-Cceeee--cccCCCCcc-ccccccceeeeecccc---CC---
Confidence            35554 69999999999986 54321       2221 266554  5777  322 4556667776654322   11   


Q ss_pred             cchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceecCCCCCCCc-cceEEEEcCC
Q 043610          296 KIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKCPVEKSVRS-FMNVPFTLEK  374 (430)
Q Consensus       296 ~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~~~~~~~rs-~~iv~f~~~~  374 (430)
                           .+.++ +.|..+..++.+.|+.+.+    +.+.++..++.+++++.|++... ..+.   ..|. .....+.+.+
T Consensus       272 -----~g~T~-~gnPla~aaa~a~L~~l~~----~~~~~~v~~~g~~l~~~L~~l~~-~~v~---~vrg~Gl~~~ie~~~  337 (387)
T d1vefa1         272 -----HGTTF-GGNPLAMAAGVAAIRYLER----TRLWERAAELGPWFMEKLRAIPS-PKIR---EVRGMGLMVGLELKE  337 (387)
T ss_dssp             -----SCCSS-TTCHHHHHHHHHHHHHHHH----HTTHHHHHHHHHHHHHHHHTSCC-TTEE---EEEEETTEEEEEESS
T ss_pred             -----ccccC-CCCcchhhhcccchhhccc----ccccchHhhhhHHHHHHHHhcCC-CceE---EEeecceEEEEEEeC
Confidence                 12332 4467778888889998875    34567777778888888876321 1110   1121 2345566664


Q ss_pred             CchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          375 SDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       375 ~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                      . ....+.+.+.++|+...+..  ...+|+++...+|++||++++++|++.+
T Consensus       338 ~-~~~~~~~~~~~~g~l~~~~g--~~~ir~~Ppl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         338 K-AAPYIARLEKEHRVLALQAG--PTVIRFLPPLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             C-SHHHHHHHHHHHCEECEESS--TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             C-chHHHHHHHHHCCCeEEecC--CCEEEEECCccCCHHHHHHHHHHHHHHh
Confidence            2 23356666677888765421  2369999988899999999999999876

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=98.87  E-value=5.3e-08  Score=95.81  Aligned_cols=318  Identities=8%  Similarity=0.008  Sum_probs=161.7

Q ss_pred             CcHHHHHHHHHHhhhccCCCCcccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEEeCcHHHHHHHHHhhc--CCCC
Q 043610           81 LPEKVLLKAQSELYNWRGSGMSVMEMSHRGKEFKSIIEKAESDLRALLNIPQEYSVLFLQGGATTQFAAVPLNL--CTPN  158 (430)
Q Consensus        81 ~~~~V~~a~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~r~~la~l~g~~~~~~vv~~~~gaT~a~~~~~~sl--~~~g  158 (430)
                      -+|.|.+++.+.+.+.... .+    ...+...    .++.+.|.++..-.-+ .+.|. +|||+|++.++.-.  ....
T Consensus        58 ~~p~v~~ai~~q~~~~~~~-~~----~~~~~~~----~~la~~L~~~~~~~~~-~v~f~-~sGseA~e~Alk~Ar~~t~r  126 (431)
T d1zoda1          58 CHPEIVSVIGEYAGKLDHL-FS----EMLSRPV----VDLATRLANITPPGLD-RALLL-STGAESNEAAIRMAKLVTGK  126 (431)
T ss_dssp             TCHHHHHHHHHHHHHCCCC-CT----TCCCHHH----HHHHHHHHHHSCTTCC-EEEEE-SCHHHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHhhcccc-cc----ccccHHH----HHHHHHHHHhCCcccc-eeeec-ccccchHHHHHHHHHHhcCC
Confidence            4789999999998753211 10    0112222    2445556666543333 67665 78999999886653  2334


Q ss_pred             CcEEEEeCChhHHHHHHHHHHhCC------------ceEEecCCC--CcCCCC---CCccccc--------c-CCCccEE
Q 043610          159 DPVDYIVTGSWGDKAFKEAQKFCN------------PQVIWSGKA--EKYTKI---PNFDALE--------Q-NPDAKYL  212 (430)
Q Consensus       159 d~vl~~~~g~~~~~~~~~a~~~g~------------~~~v~~~~~--~~~g~~---~d~~~l~--------i-~~~~~lv  212 (430)
                      ++++.+..++.|....... ..+.            ...++....  ..+...   .+.++++        . ..++.+|
T Consensus       127 ~~i~~~~~~yHG~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAav  205 (431)
T d1zoda1         127 YEIVGFAQSWHGMTGAAAS-ATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAF  205 (431)
T ss_dssp             CEEEEETTCCCCSSHHHHH-TCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             cceeecccccccccchhhc-ccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHHHHHHHHhccccccce
Confidence            5666666555553211111 1110            111111000  000000   0001111        1 2345556


Q ss_pred             EEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCCC--ccccccc----cEEEeCCCccc--cCCccEEEE
Q 043610          213 HICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCSK--PVDVTRF----GVIYAGAQKNV--GPSGVTIVI  276 (430)
Q Consensus       213 ~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~~--~idl~~~----d~~~~s~~K~~--gp~G~g~l~  276 (430)
                      ++--+....|++.+      +|.++ +++|+++|+|+++. +|-.  .+-.+.+    |+++  ..|.+  |.+ ++.++
T Consensus       206 i~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~--~gK~l~gG~p-~~av~  282 (431)
T d1zoda1         206 IAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILT--LSKTLGAGLP-LAAIV  282 (431)
T ss_dssp             EECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE--ECHHHHTTSS-CEEEE
T ss_pred             eeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchhc--cccccccccc-cceee
Confidence            65444455567665      24454 69999999999987 3422  1212222    5555  45777  432 24455


Q ss_pred             EcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHccCCceec
Q 043610          277 VRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYKC  356 (430)
Q Consensus       277 v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~~G~~~~  356 (430)
                      ++++..+.... .. .       ..+.+ ++.+..+..++.++|+.+.++.-++.+.+.-..+.+.+.+.+.+ .++...
T Consensus       283 ~~~~~~~~~~~-~~-~-------~~~~T-~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~-~~~i~~  351 (431)
T d1zoda1         283 TSAAIEERAHE-LG-Y-------LFYTT-HVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMER-FDCIGD  351 (431)
T ss_dssp             ECHHHHHHHHH-TT-C-------CCCCT-TTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-CTTEEE
T ss_pred             eeecchhhhhc-cc-c-------cccCC-CCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhc-CCCeEE
Confidence            56655443211 00 0       01122 24566677778888888775433344444444444444444443 222111


Q ss_pred             CCCCCCCccceEEEEcC--------CCchhHHHHHHHHHcCCee--cCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHH
Q 043610          357 PVEKSVRSFMNVPFTLE--------KSDLEAEFVKEAAKEKMVQ--LKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ  426 (430)
Q Consensus       357 ~~~~~~rs~~iv~f~~~--------~~~~~~~~~~~L~~~Gi~~--~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~  426 (430)
                         -.... ....+.+.        ......++.+.+.++|+..  .......+.||+++....|++|||+++++|++.+
T Consensus       352 ---vrG~G-lm~~ie~~~~~~~~~~~~~~~~~i~~~~~~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~eid~~~~~l~~al  427 (431)
T d1zoda1         352 ---VRGRG-LLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAI  427 (431)
T ss_dssp             ---EEEET-TEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             ---Eeecc-eEEEEEEecCCcccCccHHHHHHHHHHHHHhCcccCeeeecCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence               00111 23334331        1112335788888888752  1111123479999998899999999999999988


Q ss_pred             Hh
Q 043610          427 AK  428 (430)
Q Consensus       427 ~~  428 (430)
                      ++
T Consensus       428 ~~  429 (431)
T d1zoda1         428 ER  429 (431)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.85  E-value=5.5e-08  Score=96.51  Aligned_cols=197  Identities=8%  Similarity=0.008  Sum_probs=116.9

Q ss_pred             CCccEEEEeecCCCccccCC------CCccc-cCCCcEEEEeccCc-CCC--C-----ccccc-cccEEEeCCCccccCC
Q 043610          207 PDAKYLHICANETIHGVEFK------EYPSA-KNSTGILVADMSSN-FCS--K-----PVDVT-RFGVIYAGAQKNVGPS  270 (430)
Q Consensus       207 ~~~~lv~i~~~~t~tG~~~p------ei~~~-~~~g~~lvvD~a~s-~G~--~-----~idl~-~~d~~~~s~~K~~gp~  270 (430)
                      +++.+|++--+....|.+.+      +|.++ +++|+++|+|++++ +|-  .     ..++. ..|+++  ..|.++- 
T Consensus       247 ~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~--~gK~l~~-  323 (461)
T d1ohwa_         247 KTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMT--FSKKMMT-  323 (461)
T ss_dssp             CCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEE--ECGGGSS-
T ss_pred             CccceeeeccccccccccCchhhHHHHHHHHHHhhCcceeccccccccccccccccccccccccCchhhh--hhhcccc-
Confidence            45666777666666787766      34554 69999999999986 442  1     12222 236664  4476632 


Q ss_pred             ccEEEEEcHHHHhccCCCCCccccccchhhcCCCCCCccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcc
Q 043610          271 GVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGS  350 (430)
Q Consensus       271 G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~T~~~~~~~a~~~al~~l~~~~g~~~v~~~~~~l~~~l~~~l~~~  350 (430)
                        |+......+    .+..+..        .+.++ .-+..+..++.++|+.+.++    .+.++.+++.+++.++|.+.
T Consensus       324 --g~~~~~~~~----~~~~~~~--------~~~T~-~g~p~~~aaa~a~l~~i~~~----~l~~~~~~~g~~l~~~l~~l  384 (461)
T d1ohwa_         324 --GGFFHKEEF----RPNAPYR--------IFNTW-LGDPSKNLLLAEVINIIKRE----DLLSNAAHAGKVLLTGLLDL  384 (461)
T ss_dssp             --EEEEECGGG----SCSSTTS--------SCCSC-SSCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHH
T ss_pred             --ccccccccc----ccccccc--------ccccc-ccccccchhhcccchhhhhh----hHHHHHHHHHHHHHHHHHHH
Confidence              334433222    1112211        11222 33456777888899988753    35555556666666666542


Q ss_pred             CC-c-eecCCCCCCCccceEEEEcCCCchhHHHHHHHHHcCCeecCCCCCCCeeEEeecCCCCHHHHHHHHHHHHHHHHh
Q 043610          351 NG-F-YKCPVEKSVRSFMNVPFTLEKSDLEAEFVKEAAKEKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK  428 (430)
Q Consensus       351 ~G-~-~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~Gi~~~~g~~~~g~iRis~~~~~t~edv~~ll~~L~~~~~~  428 (430)
                      .. + .++. +-.-+. ..+.|.+++.....++.+.+.++|+++.+.  ....||+.+....|++|++.++++|++.++.
T Consensus       385 ~~~~~~~i~-~vrG~G-l~~~ie~~~~~~~~~i~~~~~~~Gll~~~~--~~~~ir~~PpL~it~~eid~~~~~l~~~l~e  460 (461)
T d1ohwa_         385 QARYPQFIS-RVRGRG-TFCSFDTPDESIRNKLISIARNKGVMLGGC--GDKSIRFRPTLVFRDHHAHLFLNIFSDILAD  460 (461)
T ss_dssp             HHHCTTTCE-EEEEET-TEEEEECSSHHHHHHHHHHHHHTTEECEEE--TTTEEECCCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HhhCCCceE-Eeeeee-EEEEEEcCCHHHHHHHHHHHHHCCeEEeeC--CCCEEEEeCCcCCCHHHHHHHHHHHHHHHhc
Confidence            10 0 0110 000122 345677775333336888899999987541  1247999998889999999999999999875


Q ss_pred             h
Q 043610          429 H  429 (430)
Q Consensus       429 ~  429 (430)
                      +
T Consensus       461 f  461 (461)
T d1ohwa_         461 F  461 (461)
T ss_dssp             C
T ss_pred             C
Confidence            3