Citrus Sinensis ID: 043653

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210--
MASLSQTNFTYTIIAFILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSREGCDASILLDDSSSIDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYNNQNNIDAGFASTRSRQF
ccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHccccccccccccccccccHHHHcHHHHcccccccccHHHHHHHHHHcccccccHHHHcccccccccccccccccccHHHHHHHHHcc
cccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHccEEEEEEEcccccccccccccEcccEcccccHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHcc
maslsqtnFTYTIIAFILLLIIStqsgaqvsptfydatcpnalNTIRTGIrnavsregcdasillddsssidsqknalpnfksargfeaIDSVKSQLEsvcpgvlsSLIFYKINKIRDMVLTEIAISRCRWWTILTVklgrrdsttASRSLaenlpsftDGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYnnqnnidagfastrsrqf
MASLSQTNFTYTIIAFILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSREGCDASILLDDSSSIDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLaenlpsftdGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYNNQNnidagfastrsrqf
MASLSQTNFTYTIIAFILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSREGCDAsillddsssidsQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYNNQNNIDAGFASTRSRQF
*******NFTYTIIAFILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSREGCDASILL*********************FEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGR*************LPSFTDGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYNNQNNID***********
************IIAFILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSREGCDASILLDDSS******NALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYNNQNNIDAGFASTRSR**
MASLSQTNFTYTIIAFILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSREGCDASILLDDSSSIDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYNNQNNIDAGFASTRSRQF
**SLSQTNFTYTIIAFILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSREGCDASILLDDSSSIDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYNNQNNIDAGFASTR****
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASLSQTNFTYTIIAFILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSREGCDASILLDDSSSIDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLISTFATKGLNAKYSVALSTQCAFFRERIYNNQNNIDAGFASTRSRQF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query212 2.2.26 [Sep-21-2011]
Q02200322 Lignin-forming anionic pe N/A no 0.886 0.583 0.504 1e-47
Q9M9Q9321 Peroxidase 5 OS=Arabidops yes no 0.900 0.595 0.433 4e-43
Q9LE15315 Peroxidase 4 OS=Arabidops no no 0.886 0.596 0.436 2e-38
A7NY33321 Peroxidase 4 OS=Vitis vin no no 0.924 0.610 0.406 4e-36
Q9FLC0324 Peroxidase 52 OS=Arabidop no no 0.820 0.537 0.421 1e-33
P22195316 Cationic peroxidase 1 OS= N/A no 0.863 0.579 0.412 1e-32
Q9LVL1325 Peroxidase 68 OS=Arabidop no no 0.948 0.618 0.383 3e-31
P00434296 Peroxidase P7 OS=Brassica N/A no 0.816 0.584 0.394 2e-30
Q05855312 Peroxidase OS=Triticum ae N/A no 0.853 0.580 0.389 2e-28
P27337315 Peroxidase 1 OS=Hordeum v N/A no 0.849 0.571 0.368 6e-27
>sp|Q02200|PERX_NICSY Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1 Back     alignment and function desciption
 Score =  189 bits (480), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/222 (50%), Positives = 139/222 (62%), Gaps = 34/222 (15%)

Query: 16  FILLLIISTQSGAQVSPTFYDATCPNALNTIRTGIRNAVSRE------------------ 57
           F LLL+   Q  AQ+S TFYD TCPNALNTIRT +R A+S E                  
Sbjct: 15  FSLLLLSCMQCHAQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQ 74

Query: 58  GCDASILLDDSSSIDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIR 117
           GCDASILLD++ SI+S+K ALPN  SARGF  I+  K ++E +CPGV+S      +   R
Sbjct: 75  GCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTV-AAR 133

Query: 118 DMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAE-NLPSFTDGLDKLISTFATKGLNA 176
           D      A+    W    TVKLGRRDSTTAS++LAE +LP   D L++LIS+FA+KGL+ 
Sbjct: 134 D---ASAAVGGPSW----TVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLST 186

Query: 177 KYSVALS-------TQCAFFRERIYNNQNNIDAGFASTRSRQ 211
           +  VALS        QC  FR+RIY+N  +IDAGFASTR RQ
Sbjct: 187 RDMVALSGAHTIGQAQCFLFRDRIYSNGTDIDAGFASTRRRQ 228
Plays an integral role in secondary cell wall biosynthesis by the polymerization of cinnamyl alcohols into lignin and by forming rigid cross-links between cellulose, pectin, hydroxy-proline-rich glycoproteins, and lignin.
Nicotiana sylvestris (taxid: 4096)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9M9Q9|PER5_ARATH Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=3 SV=2 Back     alignment and function description
>sp|Q9LE15|PER4_ARATH Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=3 SV=1 Back     alignment and function description
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function description
>sp|Q9FLC0|PER52_ARATH Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1 Back     alignment and function description
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LVL1|PER68_ARATH Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1 Back     alignment and function description
>sp|P00434|PERP7_BRARA Peroxidase P7 OS=Brassica rapa PE=1 SV=3 Back     alignment and function description
>sp|Q05855|PER1_WHEAT Peroxidase OS=Triticum aestivum PE=2 SV=1 Back     alignment and function description
>sp|P27337|PER1_HORVU Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query212
147844720306 hypothetical protein VITISV_032434 [Viti 0.915 0.633 0.506 2e-46
225425969 326 PREDICTED: lignin-forming anionic peroxi 0.896 0.582 0.506 4e-46
255561715 326 Lignin-forming anionic peroxidase precur 0.867 0.564 0.5 5e-46
255537327 323 Lignin-forming anionic peroxidase precur 0.919 0.603 0.489 5e-46
400750 322 RecName: Full=Lignin-forming anionic per 0.886 0.583 0.504 6e-46
359473537 350 PREDICTED: lignin-forming anionic peroxi 0.830 0.502 0.533 8e-46
357473919294 Peroxidase [Medicago truncatula] gi|3555 0.886 0.639 0.513 1e-45
357475155 321 Peroxidase [Medicago truncatula] gi|3555 0.896 0.591 0.502 1e-45
357473921305 Peroxidase [Medicago truncatula] gi|3555 0.924 0.642 0.495 1e-45
359473535 394 PREDICTED: lignin-forming anionic peroxi 0.882 0.474 0.497 2e-45
>gi|147844720|emb|CAN80051.1| hypothetical protein VITISV_032434 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/229 (50%), Positives = 142/229 (62%), Gaps = 35/229 (15%)

Query: 10  TYTIIAFILLLIISTQS-GAQVSPTFYDATCPNALNTIRTGIRNAVSRE----------- 57
           +Y  I   +  I+S     AQ+S  FYD TCP AL+TIRT IR AVSRE           
Sbjct: 15  SYACIFLAVFFILSNAPCEAQLSSKFYDNTCPKALSTIRTAIRTAVSRERRMAASLIRLH 74

Query: 58  -------GCDASILLDDSSSIDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIF 110
                  GCDASILLDDS++I S+KNA  N  S RGFE ID+VKSQ+ES+CPGV+S    
Sbjct: 75  FHDCFVQGCDASILLDDSATIQSEKNAPNNNNSVRGFEVIDNVKSQVESICPGVVSCADI 134

Query: 111 YKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRS-LAENLPSFTDGLDKLISTF 169
             +   RD   + +A+    W    TVKLGRRDSTT+  S  A NLPSF DGLDKL+S F
Sbjct: 135 LAV-AARD---SSVAVGGPTW----TVKLGRRDSTTSGLSQAAANLPSFRDGLDKLVSLF 186

Query: 170 ATKGLNAKYSVALS-------TQCAFFRERIYNNQNNIDAGFASTRSRQ 211
           ++KGLN +  VALS        +C  FR+RI++N  NIDAGFASTR R+
Sbjct: 187 SSKGLNTREMVALSGSHTIGQARCVTFRDRIHDNGTNIDAGFASTRRRR 235

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225425969|ref|XP_002269266.1| PREDICTED: lignin-forming anionic peroxidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255561715|ref|XP_002521867.1| Lignin-forming anionic peroxidase precursor, putative [Ricinus communis] gi|223538905|gb|EEF40503.1| Lignin-forming anionic peroxidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255537327|ref|XP_002509730.1| Lignin-forming anionic peroxidase precursor, putative [Ricinus communis] gi|223549629|gb|EEF51117.1| Lignin-forming anionic peroxidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|400750|sp|Q02200.1|PERX_NICSY RecName: Full=Lignin-forming anionic peroxidase; Flags: Precursor gi|170203|gb|AAA34050.1| anionic peroxidase [Nicotiana sylvestris] Back     alignment and taxonomy information
>gi|359473537|ref|XP_002274550.2| PREDICTED: lignin-forming anionic peroxidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357473919|ref|XP_003607244.1| Peroxidase [Medicago truncatula] gi|355508299|gb|AES89441.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357475155|ref|XP_003607863.1| Peroxidase [Medicago truncatula] gi|355508918|gb|AES90060.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357473921|ref|XP_003607245.1| Peroxidase [Medicago truncatula] gi|355508300|gb|AES89442.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|359473535|ref|XP_002269343.2| PREDICTED: lignin-forming anionic peroxidase-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query212
TAIR|locus:2012607321 AT1G14550 [Arabidopsis thalian 0.688 0.454 0.447 7.3e-38
TAIR|locus:2012597315 PER4 "peroxidase 4" [Arabidops 0.688 0.463 0.425 7.2e-36
TAIR|locus:2153529324 PRX52 "peroxidase 52" [Arabido 0.679 0.444 0.416 1.3e-30
TAIR|locus:2161193325 AT5G58400 [Arabidopsis thalian 0.679 0.443 0.432 2e-28
TAIR|locus:2161283316 AT5G58390 [Arabidopsis thalian 0.679 0.455 0.376 2.7e-25
TAIR|locus:2115335 331 AT4G36430 [Arabidopsis thalian 0.636 0.407 0.344 6.1e-22
TAIR|locus:2170204 335 PA2 "peroxidase 2" [Arabidopsi 0.617 0.391 0.361 8.5e-22
UNIPROTKB|Q9LEH3327 pod "Peroxidase 15" [Ipomoea b 0.674 0.437 0.320 3.8e-21
TAIR|locus:2170214 358 AT5G06730 [Arabidopsis thalian 0.665 0.393 0.341 1.7e-20
TAIR|locus:2053139 337 AT2G18140 [Arabidopsis thalian 0.636 0.400 0.350 1.5e-19
TAIR|locus:2012607 AT1G14550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 311 (114.5 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
 Identities = 73/163 (44%), Positives = 97/163 (59%)

Query:    58 GCDAXXXXXXXXXXXXQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIR 117
             GCDA            +++ALPNFKS RGFE ID  KS++E VCPG++S      +   R
Sbjct:    72 GCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAV-AAR 130

Query:   118 DMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAEN--LPSFTDGLDKLISTFATKGLN 175
             D   +E  +   +W     VK+GRRDST A ++LA +  LP F D LD+L   F+ KGLN
Sbjct:   131 DA--SEY-VGGPKW----AVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLN 183

Query:   176 AKYSVALS-------TQCAFFRERIYNNQNNIDAGFASTRSRQ 211
              +  VALS       +QC  FR+R+Y N ++IDAGFASTR R+
Sbjct:   184 TRDLVALSGAHTIGQSQCFLFRDRLYENSSDIDAGFASTRKRR 226
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0071456 "cellular response to hypoxia" evidence=IEP
TAIR|locus:2012597 PER4 "peroxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153529 PRX52 "peroxidase 52" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161193 AT5G58400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161283 AT5G58390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9LEH3 pod "Peroxidase 15" [Ipomoea batatas (taxid:4120)] Back     alignment and assigned GO terms
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.824
3rd Layer1.11.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-49
pfam00141180 pfam00141, peroxidase, Peroxidase 6e-25
PLN03030 324 PLN03030, PLN03030, cationic peroxidase; Provision 3e-24
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 0.004
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  163 bits (414), Expect = 1e-49
 Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 56/222 (25%)

Query: 29  QVSPTFYDATCPNALNTIRTGIRNAVSRE------------------GCDASILLDDSSS 70
           Q+S  FY  +CPNA + +R+ +R AV  +                  GCDAS+LLD +++
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 71  IDSQKNALPNFKSARGFEAIDSVKSQLESVCPGV--------LSSLIFYKINKIRDMVLT 122
             S+K+A PN  S RGF+ ID +K+ LE+ CPGV        L++         RD V  
Sbjct: 61  NTSEKDAPPNL-SLRGFDVIDDIKAALEAACPGVVSCADILALAA---------RDAV-- 108

Query: 123 EIAISRCRWWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLISTFATKGLNAKYSVAL 182
              ++    +    V LGRRD   +S +   NLPS    + +LIS FA+KGL     VAL
Sbjct: 109 --VLAGGPSY---EVPLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVAL 163

Query: 183 S-------TQCAFFRERIYNNQN------NIDAGFASTRSRQ 211
           S         C+ F +R+YN          +D  +A+   ++
Sbjct: 164 SGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKK 205

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 212
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
cd00692 328 ligninase Ligninase and other manganese-dependent 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02608289 L-ascorbate peroxidase 100.0
PLN02879251 L-ascorbate peroxidase 99.97
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 99.96
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 99.96
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.9
cd00649 409 catalase_peroxidase_1 N-terminal catalytic domain 99.88
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 99.8
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 99.57
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.35
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.34
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 98.86
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 85.95
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.4e-58  Score=416.78  Aligned_cols=174  Identities=42%  Similarity=0.707  Sum_probs=164.6

Q ss_pred             cCCCCCCcCcccCCChhHHHHHHHHHHHHHhhc------------------CCCccccccCCCCCcchhccCCCCCCCch
Q 043653           25 QSGAQVSPTFYDATCPNALNTIRTGIRNAVSRE------------------GCDASILLDDSSSIDSQKNALPNFKSARG   86 (212)
Q Consensus        25 ~~~~~L~~~fY~~sCP~ae~iVr~~v~~~~~~d------------------GcDaSILl~~t~~~~~E~~a~~N~~~lrg   86 (212)
                      .+.++|+++||++|||++|+|||++|++++++|                  ||||||||+++.   .||++++|. ++||
T Consensus        20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~---~Ek~a~~N~-~l~G   95 (324)
T PLN03030         20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSN---TEKTALPNL-LLRG   95 (324)
T ss_pred             chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCc---ccccCCCCc-Ccch
Confidence            345779999999999999999999999999999                  999999999653   799999998 9999


Q ss_pred             hHHHHHHHHHhhhhCCCccchhhHHHhhhhhhhHHHhhhhhcCcceeeceeecCCcCCCCccccccCCCCCCCCChHHHH
Q 043653           87 FEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLI  166 (212)
Q Consensus        87 ~~vI~~iK~~le~~cpg~VScADilal~Aardav~~~~~~~GGP~~~~~~v~lGRrD~~~s~~~~a~~LP~p~~~~~~l~  166 (212)
                      ||+|+.||+++|+.|||+||||||||+ ||||+|++    .|||+|   +|++||||+++|.++.+++||.|+.++++|+
T Consensus        96 f~~i~~iK~~~e~~CPg~VSCADilal-AarDaV~~----~gGP~~---~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~  167 (324)
T PLN03030         96 YDVIDDAKTQLEAACPGVVSCADILAL-AARDSVVL----TNGLTW---PVPTGRRDGRVSLASDASNLPGFTDSIDVQK  167 (324)
T ss_pred             HHHHHHHHHHHHhhCCCcccHHHHHHH-Hhhccccc----cCCCce---eeeccccCCCCCCcccccCCcCCCCCHHHHH
Confidence            999999999999999999999999999 99999999    999999   9999999999987766668999999999999


Q ss_pred             HHHHhCCCCccchhhhh-------cccccccccccC--------CCCCCCHHHHHHHHhh
Q 043653          167 STFATKGLNAKYSVALS-------TQCAFFRERIYN--------NQNNIDAGFASTRSRQ  211 (212)
Q Consensus       167 ~~F~~~Gl~~~dlVaLs-------ahC~~f~~Rly~--------dp~~~d~~~~~~L~~~  211 (212)
                      +.|++||||.+|||+||       +||.+|.+|+||        || +|||.|+++||++
T Consensus       168 ~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp-~~d~~~~~~L~~~  226 (324)
T PLN03030        168 QKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADP-SIDASFVPQLQAL  226 (324)
T ss_pred             HHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCC-chhHHHHHHHhcc
Confidence            99999999999999999       999999999995        78 9999999999864

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
1sch_A294 Peanut Peroxidase Length = 294 7e-27
4a5g_A 308 Raphanus Sativus Anionic Peroxidase. Length = 308 4e-21
1pa2_A 306 Arabidopsis Thaliana Peroxidase A2 Length = 306 1e-19
1qgj_A 300 Arabidopsis Thaliana Peroxidase N Length = 300 3e-19
1w4w_A 323 Ferric Horseradish Peroxidase C1a In Complex With F 3e-16
2atj_A 308 Recombinant Horseradish Peroxidase Complex With Ben 3e-16
1gw2_A 308 Recombinant Horseradish Peroxidase C1a Thr171ser In 3e-16
1kzm_A 308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 4e-16
6atj_A 308 Recombinant Horseradish Peroxidase C Complex With F 4e-16
3atj_A 309 Heme Ligand Mutant Of Recombinant Horseradish Perox 4e-16
4atj_A 309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 4e-16
1atj_A 306 Recombinant Horseradish Peroxidase C1a Length = 306 4e-16
1gwo_A 309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 5e-16
1gwu_A 309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 5e-16
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 1e-15
2ylj_A 306 Horse Radish Peroxidase, Mutant S167y Length = 306 1e-15
1gx2_A 309 Recombinant Horseradish Peroxidase Phe209ser Comple 4e-15
3hdl_A 304 Crystal Structure Of Highly Glycosylated Peroxidase 5e-10
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  116 bits (291), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 104/202 (51%), Gaps = 35/202 (17%)
Query: 30  VSPTFYDATCPNALNTIRTGIRNAVSRE------------------GCDAXXXXXXXXXX 71
           +S  FY   CPNAL+TI++ + +AV++E                  GCDA          
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 72  XXQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRW 131
             +K A PN  S RGFE ID++KSQ+ES+CPGV+S      +   RD V   +A+    W
Sbjct: 62  TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAV-AARDSV---VALGGASW 117
Query: 132 WTILTVKLGRRDSTTASRSLAE-NLPSFTDGLDKLISTFATKGLNAKYSVALS------- 183
                V LGRRDSTTAS S A  +LP+    L  LIS F+ KG   K  V LS       
Sbjct: 118 ----NVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQ 173
Query: 184 TQCAFFRERIYNNQNNIDAGFA 205
            QC  FR RIY N++NID  +A
Sbjct: 174 AQCTAFRTRIY-NESNIDPTYA 194
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query212
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 4e-60
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 3e-59
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 9e-59
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 3e-58
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 4e-58
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 7e-58
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 3e-56
1iyn_A 295 Chloroplastic ascorbate peroxidase; hydrogen perox 4e-16
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 1e-13
2e39_A 344 Peroxidase; heme protein, coordination geometry of 8e-12
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 6e-11
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 4e-10
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-09
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 2e-08
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
 Score =  189 bits (482), Expect = 4e-60
 Identities = 86/214 (40%), Positives = 112/214 (52%), Gaps = 45/214 (21%)

Query: 29  QVSPTFYDATCPNALNTIRTGIRNAVSRE------------------GCDASILLDDSSS 70
           ++S  FY   CPNAL+TI++ + +AV++E                  GCDAS+LLDD+S+
Sbjct: 1   ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSN 60

Query: 71  IDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLS-----SLIFYKINKIRDMVLTEIA 125
              +K A PN  S RGFE ID++KSQ+ES+CPGV+S     ++        RD V     
Sbjct: 61  FTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVA------ARDSV----V 110

Query: 126 ISRCRWWTILTVKLGRRDSTTASRSLA-ENLPSFTDGLDKLISTFATKGLNAKYSVALS- 183
                 W    V LGRRDSTTAS S A  +LP+    L  LIS F+ KG   K  V LS 
Sbjct: 111 ALGGASW---NVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSG 167

Query: 184 ------TQCAFFRERIYNNQNNIDAGFASTRSRQ 211
                  QC  FR RIYN  +NID  +A +    
Sbjct: 168 AHTIGQAQCTAFRTRIYNE-SNIDPTYAKSLQAN 200
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query212
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
2e39_A 344 Peroxidase; heme protein, coordination geometry of 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1llp_A 343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 99.97
3m5q_A 357 Manganese peroxidase 1; heme, Mn(II)-binding site, 99.97
3fmu_A 331 VersatIle peroxidase VPL2; class II (fungal) perox 99.97
3q3u_A 338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 99.96
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 99.96
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 99.96
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 99.96
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 99.96
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 99.95
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 99.95
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 99.94
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 99.94
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 99.94
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 99.94
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 99.93
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=8.7e-59  Score=414.62  Aligned_cols=173  Identities=34%  Similarity=0.555  Sum_probs=167.3

Q ss_pred             CCcCcccCCChhHHHHHHHHHHHHHhhc------------------CCCccccccCCCCCcchhccCCCCCCCchhHHHH
Q 043653           30 VSPTFYDATCPNALNTIRTGIRNAVSRE------------------GCDASILLDDSSSIDSQKNALPNFKSARGFEAID   91 (212)
Q Consensus        30 L~~~fY~~sCP~ae~iVr~~v~~~~~~d------------------GcDaSILl~~t~~~~~E~~a~~N~~~lrg~~vI~   91 (212)
                      |+++||++|||++|+|||++|++++.+|                  ||||||||++++++.+|+++++|.++|||||+||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999                  9999999999988889999999987899999999


Q ss_pred             HHHHHhhhhCCCccchhhHHHhhhhhhhHHHhhhhhcCcceeeceeecCCcCCCCccccccC-CCCCCCCChHHHHHHHH
Q 043653           92 SVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAE-NLPSFTDGLDKLISTFA  170 (212)
Q Consensus        92 ~iK~~le~~cpg~VScADilal~Aardav~~~~~~~GGP~~~~~~v~lGRrD~~~s~~~~a~-~LP~p~~~~~~l~~~F~  170 (212)
                      .||++||+.||++||||||||+ |||+||++    +|||.|   +|++||||++++++..++ +||+|+.++++|++.|+
T Consensus        82 ~iK~~le~~Cp~~VScADilal-Aardav~~----~GGP~~---~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~  153 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAF-AARDSANL----AGNITY---QVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFA  153 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHH-HHHHHHHH----HHCCCC---CCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHH-HHhhhhhc----cCCCcc---ccccCccCCCCCCccccccCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999 99999999    999999   999999999999988887 89999999999999999


Q ss_pred             hCCCCccchhhhh-------cccccccccccC-------CCCCCCHHHHHHHHhh
Q 043653          171 TKGLNAKYSVALS-------TQCAFFRERIYN-------NQNNIDAGFASTRSRQ  211 (212)
Q Consensus       171 ~~Gl~~~dlVaLs-------ahC~~f~~Rly~-------dp~~~d~~~~~~L~~~  211 (212)
                      +||||.+||||||       +||.+|.+|+||       || +|||.|++.||++
T Consensus       154 ~~Gl~~~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP-~ld~~~a~~L~~~  207 (304)
T 3hdl_A          154 NKTLTADEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDP-TLSPSYAALLRNT  207 (304)
T ss_dssp             TTTCCHHHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCT-TSCHHHHHHHHHH
T ss_pred             HcCCCHHHhhhhhccccccccccchhhhhhcccCCCCCCCC-cccHHHHHHHhcc
Confidence            9999999999999       999999999996       88 9999999999875
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 212
d1qgja_ 300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-36
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-35
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 9e-34
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-33
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 7e-32
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 4e-30
d1llpa_ 343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 1e-11
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 2e-08
d2e39a1 336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 6e-08
d1yyda1 357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 3e-07
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]

 Score =  127 bits (320), Expect = 1e-36
 Identities = 68/196 (34%), Positives = 96/196 (48%), Gaps = 36/196 (18%)

Query: 29  QVSPTFYDATCPNALNTIRTGIRNAVSRE------------------GCDASILLDDSSS 70
           Q+SP  Y  +CPN +  +R  +  A+  E                  GCDAS+LLD +  
Sbjct: 1   QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA-- 58

Query: 71  IDSQKNALPNFKSARGFEAIDSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCR 130
            DS+K A+PN  SARGFE ID++K+ +E+ CPGV+S      +   RD V+         
Sbjct: 59  -DSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAA-RDSVV---LSGGPG 113

Query: 131 WWTILTVKLGRRDSTTASRSLAENLPSFTDGLDKLISTFATKGLNAKYSVALS------- 183
           W       LGR+D   A+++ A NLPS  + LD +I+ F    LN    VALS       
Sbjct: 114 WRV----ALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQ 169

Query: 184 TQCAFFRERIYNNQNN 199
            +CA F  R++N    
Sbjct: 170 AKCAVFSNRLFNFTGA 185
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query212
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1yyda1 357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1 336 Fungal peroxidase (ligninase) {Arthromyces ramosus 99.98
d1llpa_ 343 Fungal peroxidase (ligninase) {White rot basidiomy 99.97
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 99.97
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 99.96
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.58
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.53
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.49
d1itka1 406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.47
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 99.47
d1mwva1 406 Catalase-peroxidase KatG {Burkholderia pseudomalle 99.42
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.4
d2ccaa1 410 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.28
d1ub2a1 406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.24
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1e-55  Score=392.67  Aligned_cols=174  Identities=36%  Similarity=0.639  Sum_probs=166.9

Q ss_pred             CCCcCcccCCChhHHHHHHHHHHHHHhhc------------------CCCccccccCCCCCcchhccCCCCCCCchhHHH
Q 043653           29 QVSPTFYDATCPNALNTIRTGIRNAVSRE------------------GCDASILLDDSSSIDSQKNALPNFKSARGFEAI   90 (212)
Q Consensus        29 ~L~~~fY~~sCP~ae~iVr~~v~~~~~~d------------------GcDaSILl~~t~~~~~E~~a~~N~~~lrg~~vI   90 (212)
                      ||+.+||++|||++|+|||++|++++.+|                  ||||||||++++++.+|+++.+|.++++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            79999999999999999999999999988                  999999999988888999999998667999999


Q ss_pred             HHHHHHhhhhCCCccchhhHHHhhhhhhhHHHhhhhhcCcceeeceeecCCcCCCCccccccC-CCCCCCCChHHHHHHH
Q 043653           91 DSVKSQLESVCPGVLSSLIFYKINKIRDMVLTEIAISRCRWWTILTVKLGRRDSTTASRSLAE-NLPSFTDGLDKLISTF  169 (212)
Q Consensus        91 ~~iK~~le~~cpg~VScADilal~Aardav~~~~~~~GGP~~~~~~v~lGRrD~~~s~~~~a~-~LP~p~~~~~~l~~~F  169 (212)
                      |.||++||..||++|||||||+| |||+||+.    +|||+|   +|++||+|+++|+...+. +||.|+.++++|++.|
T Consensus        81 d~iK~~le~~cp~~VScADIlal-AardAv~~----~GGP~~---~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F  152 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAI-AAEIASVL----GGGPGW---PVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASF  152 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHH-HHHHHHHT----TTCCCC---CCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHH-HHhhhhhh----cCCCcc---cccCCCcCcCccccccccccCCCCCCCHHHHHHHH
Confidence            99999999999999999999999 99999999    999999   999999999999888777 8999999999999999


Q ss_pred             HhCCCCccchhhhh-------cccccccccccC-------CCCCCCHHHHHHHHhh
Q 043653          170 ATKGLNAKYSVALS-------TQCAFFRERIYN-------NQNNIDAGFASTRSRQ  211 (212)
Q Consensus       170 ~~~Gl~~~dlVaLs-------ahC~~f~~Rly~-------dp~~~d~~~~~~L~~~  211 (212)
                      ++||||.+|||||+       +||.+|..|+|+       || ++|+.|+..|++.
T Consensus       153 ~~~Gl~~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~-~~~~~~~~~L~~~  207 (304)
T d1fhfa_         153 AVQGLNTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDP-TLNTTYLEVLRAR  207 (304)
T ss_dssp             HHTTCCHHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCT-TSCHHHHHHHHHH
T ss_pred             HHcCCCHHHHHHHhhhhhhcccccccccccccCCCCCCCCCc-ccCHHHHHHHHHh
Confidence            99999999999999       899999999996       67 8999999999874
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure