Citrus Sinensis ID: 043666

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680

MALAPGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFLQASSAAQQALDQVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPDVGDTGLTASQFSKSQNGSGKTDSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCEQAAEAHKSKGAGHSSRRRLSSDSGNVSKSSVDAILSNSSSTPSSQSNETPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEIEDTSPTSLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGHPDPKSLARHPPDQIRTILGI

cccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHcc

cccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHcccccccccccHHHHHHHHHcccccHHccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHcc

malapglsRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFLQASSAAQQALDQVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRklgdtenpevGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALtrggpgglprpievhahdplrYVGDMLGWLHQALASERELVLGlldpdvgdtgltasqfsksqngsgktdsdlTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGekllrypplvaadlspptavrDGVSVLLEIIEThnstmvpvsretpdFNLVISALLDPIIQMCEQAAEAhkskgaghssrrrlssdsgnvskSSVDAILsnssstpssqsnetpskIFLINCLCaiqqpligHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRcgllpkmrhfrskevslplaeiedtsptsLSECLKAFFGLvlgsesslpefellqvpklrSEACIQVARSLAEAYEQIYQAImdpknghpdpkslarhppdqirtilgi

malapglsrklkkvlesrtetpdllASLKTLSTfyeentpharrNLRSTIEKRALSINLDFLQASSAAQQALDQVEEEVNSLAECCDRIEKAlnscnattgniietterlkrdldvnTQRQEIVscflrdyqlsNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKlgdtenpevgELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPDVGDTGLTasqfsksqngsgktdsdLTFVLDRIFEGVCRPFKVRVEqvlqsqpsliisyklsNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPlvaadlspptaVRDGVSVLLEIIEThnstmvpvsreTPDFNLVISALLDPIIQMCEQAAEAHkskgaghssrrrlssdsgnvsKSSVDAILsnssstpssqsneTPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRcgllpkmrhfrsKEVSLPLAEIEDTSPTSLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGhpdpkslarhppdqirtilgi

MALAPGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFlqassaaqqaldqVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTrggpgglprpIEVHAHDPLRYVGDMLGWLHQALASERElvlglldpdvgdtgltASQFSKSQNGSGKTDSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCEQAAEAHKSKGAGHSSRRRLssdsgnvskssvdAILsnssstpssqsnetpsKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEIEDTSPTSLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGHPDPKSLARHPPDQIRTILGI

******************************L*TFY*****************RALSINLDFLQ**************EVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPDVG*********************DLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCE***************************************************KIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEI******SLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAI***************************

****PGL*RKLKKVLESRTETPDLLASLKTLSTFYEEN***ARRNLRSTIEKRALSINLDFLQASSAAQQALDQVEEEVNSLAECCDR*********************LK****VNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECR************LLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTR*****LPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPDVG********************SDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLL*YPPLVAADLSPPTAVRDGVSVLLEIIE*****************LVISALLDPIIQMCEQAAE****************SDSGNVSKSSVDAILSN**********ETPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRH********************LSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGHPDPKSLARHPPDQIRTILGI

MALAPGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFLQASSA**************LAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPDVGDTGLTASQF**********DSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCEQA***********************************************PSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEIEDTSPTSLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGHPDPKSLARHPPDQIRTILGI

*ALAPGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFLQASSAAQQALDQVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPD******************GKTDSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCEQAAEAHK*************SDSGNVSKSSVDAILSNSSSTPSSQSNETPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEIEDTSPTSLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGHPDPKSLARHPPDQIRTILGI

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MALAPGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFLQASSAAQQAxxxxxxxxxxxxxxxxxxxxxLNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPDVGDTGLTASQFSKSQNGSGKTDSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCEQAAEAHKSKGAGHSSRRRLSSDSGNVSKSSVDAILSNSSSTPSSQSNETPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEIEDTSPTSLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGHPDPKSLARHPPDQIRTILGI

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		680	2.2.26 [Sep-21-2011]
Q3SZI7		657	Conserved oligomeric Golg	yes	no	0.904	0.936	0.343	1e-111
Q9Y2V7		657	Conserved oligomeric Golg	yes	no	0.901	0.933	0.342	1e-110
Q8R3I3		657	Conserved oligomeric Golg	yes	no	0.901	0.933	0.343	1e-109
Q68FP9		657	Conserved oligomeric Golg	yes	no	0.901	0.933	0.342	1e-108
Q9V564		630	Conserved oligomeric Golg	yes	no	0.880	0.950	0.318	5e-87
Q54CT0		673	Conserved oligomeric Golg	yes	no	0.923	0.933	0.282	5e-85
P0CM80		742	Conserved oligomeric Golg	yes	no	0.876	0.803	0.288	5e-83
P0CM81		742	Conserved oligomeric Golg	N/A	no	0.876	0.803	0.288	5e-83
Q0UYL3		694	Conserved oligomeric Golg	N/A	no	0.770	0.755	0.273	3e-57
C8V7C6		739	Conserved oligomeric Golg	yes	no	0.679	0.625	0.302	6e-56

>sp\|Q3SZI7\|COG6_BOVIN Conserved oligomeric Golgi complex subunit 6 OS=Bos taurus GN=COG6 PE=2 SV=1	Back alignment and function desciption

 Score =  402 bits (1033), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/679 (34%), Positives = 372/679 (54%), Gaps = 64/679 (9%)

Query: 7   LSRKLKKVLESRTET-PDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFLQAS 65
           LSRKL+K+L++R +   D+L +LK LSTF+ EN+   RRNLR  IE+R+L+IN +F+   
Sbjct: 35  LSRKLRKILDTRLDNDKDMLEALKALSTFFVENSLRTRRNLRGDIERRSLAINEEFVSIF 94

Query: 66  SAAQQALDQVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVS 125
              ++ L+ + E+V +++ CC  +   L +    T ++I  T +L+ +      R ++  
Sbjct: 95  KEVKEELESIHEDVQAMSSCCQDMTSRLQAAKEQTQDLIVKTTKLQAESQRLEIRAQVAD 154

Query: 126 CFLRDYQLSNEEINALR---DEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDM 182
            FL  +QL+++E++ LR   +  + E FFKAL  V++IH + KVLLRT+ Q AGLE+M+ 
Sbjct: 155 AFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQ 214

Query: 183 MAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVANMR 242
           MA+ QE +YERL RW Q+ECR L   E+ ++  +L  A+  L++RPVL+KY  +E    R
Sbjct: 215 MALLQETSYERLYRWAQSECRTLTQ-ESCDISPVLTQAMEALQDRPVLYKYTLDEFGTAR 273

Query: 243 HNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPD 302
            + + R F+ ALTRGGPGG PRPIE+H+HDPLRYVGDML WLHQA ASE+E +  LL   
Sbjct: 274 RSTVVRGFIDALTRGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALL--- 330

Query: 303 VGDTGLTASQFSKSQNGSGKTDSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKL 362
                       K     G  + ++  V+  I EGVCRP KVR+EQV+ ++P  ++ YK+
Sbjct: 331 ------------KHVTAQG-VEENIQEVVGHITEGVCRPLKVRIEQVIVAEPGAVLLYKI 377

Query: 363 SNTLEFYSYTISDLLGRE-TALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLS 421
           SN L+FY +TIS ++G   T L  T+  +   ++K +F+ L     KL+    L   DL 
Sbjct: 378 SNLLKFYHHTISGIIGNSATTLLTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLG 437

Query: 422 PPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCEQAAEAHKSKGA 481
           P +A+   + +L E++ +H+S++VP+     DF  V+S +LDP++QMC  +A        
Sbjct: 438 PSSALNQTLVLLREVLASHDSSVVPLDARQADFVQVLSCVLDPLLQMCTVSA-------- 489

Query: 482 GHSSRRRLSSDSGNVSKSSVDAILSNSSSTPSSQSNETPSKIFLINCLCAIQQPLIGHEV 541
                    S  G    ++                       F++N L  ++  L   E 
Sbjct: 490 ---------SHLGTADMAT-----------------------FMVNSLYMMKTTLALFEF 517

Query: 542 AAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSL-PLAEIEDTSPTS 600
               ++ L   I+ HL  L++++   +L R GL       +  +V   PLA + +    +
Sbjct: 518 TDRRLEMLQFQIEAHLDTLINEQASYVLTRAGLSYIYNMVQQHKVEQGPLANLPNLDSVA 577

Query: 601 LSECLKAFFGLVLGSESSL-PEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNG 659
           L   +  F   +   ++ L P+   L    ++ +   Q    +  AY ++Y A+M+P N 
Sbjct: 578 LKAAMVQFDRYLSAPDNLLMPQLNFLLSATVKEQIIKQSTELVCRAYGEVYAAVMNPVNE 637

Query: 660 HPDPKSLARHPPDQIRTIL 678
           + DP S+    P Q++T+L
Sbjct: 638 YKDPGSILHRSPQQVQTLL 656

Required for normal Golgi function.
Bos taurus (taxid: 9913)

>sp\|Q9Y2V7\|COG6_HUMAN Conserved oligomeric Golgi complex subunit 6 OS=Homo sapiens GN=COG6 PE=1 SV=2	Back alignment and function description

>sp\|Q8R3I3\|COG6_MOUSE Conserved oligomeric Golgi complex subunit 6 OS=Mus musculus GN=Cog6 PE=2 SV=2	Back alignment and function description

>sp\|Q68FP9\|COG6_RAT Conserved oligomeric Golgi complex subunit 6 OS=Rattus norvegicus GN=Cog6 PE=2 SV=1	Back alignment and function description

>sp\|Q9V564\|COG6_DROME Conserved oligomeric Golgi complex subunit 6 OS=Drosophila melanogaster GN=CG1968 PE=2 SV=1	Back alignment and function description

>sp\|Q54CT0\|COG6_DICDI Conserved oligomeric Golgi complex subunit 6 OS=Dictyostelium discoideum GN=cog6 PE=3 SV=1	Back alignment and function description

>sp\|P0CM80\|COG6_CRYNJ Conserved oligomeric Golgi complex subunit 6 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=COG6 PE=3 SV=1	Back alignment and function description

>sp\|P0CM81\|COG6_CRYNB Conserved oligomeric Golgi complex subunit 6 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=COG6 PE=3 SV=1	Back alignment and function description

>sp\|Q0UYL3\|COG6_PHANO Conserved oligomeric Golgi complex subunit 6 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=COG6 PE=3 SV=1	Back alignment and function description

>sp\|C8V7C6\|COG6_EMENI Conserved oligomeric Golgi complex subunit 6 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cog6 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		680
255557823		694	component of oligomeric golgi complex, p	1.0	0.979	0.807	0.0
225427266		690	PREDICTED: conserved oligomeric Golgi co	1.0	0.985	0.813	0.0
118485590		693	unknown [Populus trichocarpa]	1.0	0.981	0.791	0.0
449449781		694	PREDICTED: conserved oligomeric Golgi co	0.998	0.978	0.789	0.0
224129614		712	predicted protein [Populus trichocarpa]	1.0	0.955	0.755	0.0
357484373		695	Conserved oligomeric Golgi complex subun	0.998	0.976	0.793	0.0
356538431		693	PREDICTED: conserved oligomeric Golgi co	0.995	0.976	0.798	0.0
297846136		680	hypothetical protein ARALYDRAFT_890731 [	0.991	0.991	0.755	0.0
79356323		680	uncharacterized protein [Arabidopsis tha	0.992	0.992	0.747	0.0
357484375		677	Conserved oligomeric Golgi complex subun	0.972	0.976	0.757	0.0

>gi\|255557823\|ref\|XP_002519941.1\| component of oligomeric golgi complex, putative [Ricinus communis] gi\|223540987\|gb\|EEF42545.1\| component of oligomeric golgi complex, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1155 bits (2987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/690 (80%), Positives = 622/690 (90%), Gaps = 10/690 (1%)

Query: 1   MALAPGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLD 60
           + LAPGLSRKLKKVLE RT+TPDL+ASL  LSTFY +NTP ARRNLRSTIEKR+L INL 
Sbjct: 5   VGLAPGLSRKLKKVLECRTDTPDLVASLDALSTFYSDNTPQARRNLRSTIEKRSLHINLQ 64

Query: 61  FLQASSAAQQALDQVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQR 120
           FLQAS+AAQ ALD+VEEEVNSLAECCD+I KALNSC+A+TG+II TTERLK++L+V TQR
Sbjct: 65  FLQASNAAQLALDRVEEEVNSLAECCDKIAKALNSCSASTGDIISTTERLKQELEVTTQR 124

Query: 121 QEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELM 180
           QEIVSCFLRDYQLSNEEINALR+E+L+E+FFKAL+HVQEIHANCK+LLRTHHQRAGLELM
Sbjct: 125 QEIVSCFLRDYQLSNEEINALREEELNENFFKALSHVQEIHANCKILLRTHHQRAGLELM 184

Query: 181 DMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVAN 240
           DMMA+YQEGAYERLCRWVQAECRKLGD +NPEV ELL+TAVRCLKERPVLFKYCAEEVAN
Sbjct: 185 DMMAVYQEGAYERLCRWVQAECRKLGDADNPEVSELLRTAVRCLKERPVLFKYCAEEVAN 244

Query: 241 MRHNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLD 300
           MRHNALFRRF+SALTRGGPGG+PRPIEVHAHDPLRYVGDMLGWLHQALASERELVL L D
Sbjct: 245 MRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLVLFD 304

Query: 301 PD-VGDTGLTASQFSKS-QNGSGKTDSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLII 358
           PD V DTG TA++ SKS +NG+GK +SDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLI+
Sbjct: 305 PDAVLDTGSTANRLSKSTENGAGKIESDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIV 364

Query: 359 SYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAA 418
           +YKLS TLEFYSYT+SDLLGR+TALC+TLW+LKEAAQKT+FDILKSRGEKLLRYPPLVA 
Sbjct: 365 AYKLSITLEFYSYTMSDLLGRDTALCSTLWMLKEAAQKTFFDILKSRGEKLLRYPPLVAI 424

Query: 419 DLSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCEQAAEAHKS 478
           DLSPP AVR+GVSVLLEIIETHNS M+P S +  DF+ VISA+LDPIIQMCEQAAEAHKS
Sbjct: 425 DLSPPEAVREGVSVLLEIIETHNSMMIPASEKKSDFDSVISAILDPIIQMCEQAAEAHKS 484

Query: 479 KGAGHSSRRRLSSDSGNVSKSSVDAILSNSSSTPSSQSNETPSKIFLINCLCAIQQPLIG 538
           KGA H SRRR SSDSG ++KSSVDA+LSNS+S P+SQ++ETPSKIFLINCLCAIQQPL  
Sbjct: 485 KGAAHLSRRRTSSDSGQINKSSVDALLSNSNSAPTSQNSETPSKIFLINCLCAIQQPLYR 544

Query: 539 HEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSK--------EVSLPL 590
           HE+AA+YVK LG+MI+NH+  LV KE D ILRRCGL  KM HF++          V +PL
Sbjct: 545 HEIAADYVKKLGAMIENHMHALVAKEADAILRRCGLSNKMSHFQNSLNNEAGDAVVGIPL 604

Query: 591 AEIEDTSPTSLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIY 650
           A+IEDTSP +LSE L+AFFGL+LGS S LPEFE +QVPKLRSEAC+ +ARSLAEAYE IY
Sbjct: 605 AQIEDTSPAALSESLRAFFGLILGSGSPLPEFEQMQVPKLRSEACLLLARSLAEAYELIY 664

Query: 651 QAIMDPKNGHPDPKSLARHPPDQIRTILGI 680
            AIMDPKNG+  PKSLARHPPDQIRTILGI
Sbjct: 665 TAIMDPKNGYSGPKSLARHPPDQIRTILGI 694

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225427266\|ref\|XP_002281271.1\| PREDICTED: conserved oligomeric Golgi complex subunit 6 [Vitis vinifera] gi\|297742128\|emb\|CBI33915.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|118485590\|gb\|ABK94646.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449449781\|ref\|XP_004142643.1\| PREDICTED: conserved oligomeric Golgi complex subunit 6-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224129614\|ref\|XP_002328760.1\| predicted protein [Populus trichocarpa] gi\|222839058\|gb\|EEE77409.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|357484373\|ref\|XP_003612474.1\| Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi\|355513809\|gb\|AES95432.1\| Conserved oligomeric Golgi complex subunit [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356538431\|ref\|XP_003537707.1\| PREDICTED: conserved oligomeric Golgi complex subunit 6-like [Glycine max]	Back alignment and taxonomy information

>gi\|297846136\|ref\|XP_002890949.1\| hypothetical protein ARALYDRAFT_890731 [Arabidopsis lyrata subsp. lyrata] gi\|297336791\|gb\|EFH67208.1\| hypothetical protein ARALYDRAFT_890731 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|79356323\|ref\|NP_174458.2\| uncharacterized protein [Arabidopsis thaliana] gi\|44917431\|gb\|AAS49040.1\| At1g31780 [Arabidopsis thaliana] gi\|110740765\|dbj\|BAE98481.1\| hypothetical protein [Arabidopsis thaliana] gi\|332193271\|gb\|AEE31392.1\| uncharacterized protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|357484375\|ref\|XP_003612475.1\| Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi\|355513810\|gb\|AES95433.1\| Conserved oligomeric Golgi complex subunit [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		680
TAIR\|locus:2034506		680	AT1G31780 "AT1G31780" [Arabido	0.992	0.992	0.694	4e-248
UNIPROTKB\|F1P591		662	COG6 "Uncharacterized protein"	0.661	0.679	0.387	3.3e-98
UNIPROTKB\|F1MLE3		657	COG6 "Conserved oligomeric Gol	0.661	0.684	0.383	1.1e-97
UNIPROTKB\|Q3SZI7		657	COG6 "Conserved oligomeric Gol	0.661	0.684	0.383	1.8e-97
UNIPROTKB\|Q9Y2V7		657	COG6 "Conserved oligomeric Gol	0.661	0.684	0.387	5.4e-96
UNIPROTKB\|E2R8J6		685	COG6 "Uncharacterized protein"	0.661	0.656	0.385	5.4e-96
MGI\|MGI:1914792		657	Cog6 "component of oligomeric	0.661	0.684	0.389	4.8e-95
RGD\|1303283		657	Cog6 "component of oligomeric	0.661	0.684	0.385	1.3e-94
UNIPROTKB\|Q68FP9		657	Cog6 "Conserved oligomeric Gol	0.661	0.684	0.385	1.3e-94
ZFIN\|ZDB-GENE-040426-909		656	cog6 "component of oligomeric	0.663	0.687	0.371	1.5e-89

TAIR\|locus:2034506 AT1G31780 "AT1G31780" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2390 (846.4 bits), Expect = 4.0e-248, P = 4.0e-248
 Identities = 473/681 (69%), Positives = 546/681 (80%)

Query:     1 MALAPGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLD 60
             + LAPGLSRKLKKVL+ RT++PDL+ASL  LS+FY+EN+ HARRNLRSTIEKRAL IN +
Sbjct:     5 VGLAPGLSRKLKKVLDCRTDSPDLVASLNALSSFYDENSAHARRNLRSTIEKRALQINSE 64

Query:    61 FXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQR 120
             F             VEEEVN+LA+CCD+I  AL+S  ATT +II TTERLK++L+V TQR
Sbjct:    65 FLNAADSTQIALDRVEEEVNALADCCDKIAAALSSSAATTSDIISTTERLKQELEVTTQR 124

Query:   121 QEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELM 180
             QEIV+CFLRDYQLSNEEI ALR+++L+E+FF+AL+HVQEIH+NCK+LLRTHHQRAGLELM
Sbjct:   125 QEIVNCFLRDYQLSNEEIKALREDELNENFFQALSHVQEIHSNCKLLLRTHHQRAGLELM 184

Query:   181 DMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVAN 240
             DMMA+YQEGAYERLCRWVQAECRKLGDT+NPEV ELL+TAVRCLKERPVLFKYCAEEV N
Sbjct:   185 DMMAVYQEGAYERLCRWVQAECRKLGDTDNPEVSELLRTAVRCLKERPVLFKYCAEEVGN 244

Query:   241 MRHNALFRRFLSALTXXXXXXXXXXIEVHAHDPLRYVGDMLGWLHQALASEREXXXXXXX 300
             +RHNALFRRF+SALT          IEVHAHDPLRYVGDMLGWLHQALASERE       
Sbjct:   245 LRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVHALFD 304

Query:   301 XXXXXXXXXASQFSKSQNGSGKT-DSDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIIS 359
                      A   + S+N + K  +SD TFVLDRIFEGVCRPFKVRVEQVLQSQPSLIIS
Sbjct:   305 IDSADHQSNAK--NTSENIALKAGESDFTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIIS 362

Query:   360 YKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAAD 419
             YKL+NTLEFYSYTISDLLGR+TALCNT+ ++K+AAQKT+FDILK+RGEKLLRYPP VA D
Sbjct:   363 YKLTNTLEFYSYTISDLLGRDTALCNTIGMVKDAAQKTFFDILKTRGEKLLRYPPPVAVD 422

Query:   420 LSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPDFNLVISALLDPIIQMCEQAAEAHKSK 479
             LSPP AVR+GVS+ LEIIE +NS MV  S E P F+ V+SALLDPII+MCEQAAEAHKSK
Sbjct:   423 LSPPPAVREGVSLTLEIIENYNSMMVSASGEKPAFDPVLSALLDPIIKMCEQAAEAHKSK 482

Query:   480 GAGHSSRRRLXXXXXXXXXXXXXAILXXXXXXXXXXXXXXXXKIFLINCLCAIQQPLIGH 539
              +G   RR               A+L                KIFLINCLCAIQQPL+ H
Sbjct:   483 KSGQLPRRS-RTSSDSSQLTSVDALLSSSPSPPQNNETPS--KIFLINCLCAIQQPLLRH 539

Query:   540 EVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEIEDTSPT 599
             +VA++YV N+G MI+NH+ +LV  EVDT+L +CGL  KM+ FRS    LPL+E +DTSP 
Sbjct:   540 DVASQYVTNIGLMIENHINLLVQNEVDTLLHKCGLSDKMQIFRSSTSELPLSERQDTSPA 599

Query:   600 SLSECLKAFFGLVLGSESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNG 659
              LSECLKAFFGLVLGSE SLPEFE +QVPKLRSEAC++VA++LAEAYE IYQA+ D +NG
Sbjct:   600 MLSECLKAFFGLVLGSEGSLPEFEQIQVPKLRSEACVRVAKTLAEAYEVIYQAVTDQQNG 659

Query:   660 HPDPKSLARHPPDQIRTILGI 680
             +PDPKSLARHPPDQIRTILGI
Sbjct:   660 YPDPKSLARHPPDQIRTILGI 680

GO:0003674 "molecular_function" evidence=ND

GO:0005622 "intracellular" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

UNIPROTKB\|F1P591 COG6 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MLE3 COG6 "Conserved oligomeric Golgi complex subunit 6" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q3SZI7 COG6 "Conserved oligomeric Golgi complex subunit 6" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9Y2V7 COG6 "Conserved oligomeric Golgi complex subunit 6" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|E2R8J6 COG6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

MGI\|MGI:1914792 Cog6 "component of oligomeric golgi complex 6" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|1303283 Cog6 "component of oligomeric golgi complex 6" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q68FP9 Cog6 "Conserved oligomeric Golgi complex subunit 6" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-040426-909 cog6 "component of oligomeric golgi complex 6" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8R3I3	COG6_MOUSE	No assigned EC number	0.3436	0.9014	0.9330	yes	no
Q3SZI7	COG6_BOVIN	No assigned EC number	0.3431	0.9044	0.9360	yes	no
Q68FP9	COG6_RAT	No assigned EC number	0.3421	0.9014	0.9330	yes	no
Q9Y2V7	COG6_HUMAN	No assigned EC number	0.3421	0.9014	0.9330	yes	no
Q9V564	COG6_DROME	No assigned EC number	0.3187	0.8808	0.9507	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		680
smart01087		598	smart01087, COG6, Conserved oligomeric complex COG	0.0
pfam06419		615	pfam06419, COG6, Conserved oligomeric complex COG6	1e-155

>gnl\|CDD\|215018 smart01087, COG6, Conserved oligomeric complex COG6	Back alignment and domain information

 Score =  550 bits (1418), Expect = 0.0
 Identities = 232/653 (35%), Positives = 343/653 (52%), Gaps = 68/653 (10%)

Query: 39  TPHARRNLRSTIEKRALSINLDFLQASSAAQQALDQVEEEVNSLAECCDRIEKALNSCNA 98
           T  ARRNLRS +EKR L IN +FL       + L ++ E+V  L   CD ++  LN+   
Sbjct: 1   TLEARRNLRSDLEKRLLKINGEFLSEFKPVAEQLQRLSEDVQKLNNSCDSMKDQLNTAKN 60

Query: 99  TTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINAL--RDEDLDESFFKALAH 156
            T ++I     L+ +L +   +++++  FL  + LS +E++ L  R+  +D+ FF+ L  
Sbjct: 61  QTQDLISEASELQEELALLELKKKLLDAFLSKFTLSQDELDVLTSREGPIDDEFFQVLDK 120

Query: 157 VQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGEL 216
           VQEIH +C VLL+  +Q AGLE+M+ M    E AYERL RW+Q+E R L  T+NPE+  L
Sbjct: 121 VQEIHEDCSVLLQNEYQTAGLEIMEKMNQLLERAYERLYRWLQSELRNL-TTDNPEILSL 179

Query: 217 LKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGG--PGGLPRPIEVHAHDPL 274
           L+ A+R L ERPVLFKYC +E    R  +L   FLSALTRGG  PGG PRPIE+ AHDPL
Sbjct: 180 LRQALRRLSERPVLFKYCLDEFTTARSKSLLDAFLSALTRGGQKPGGNPRPIELSAHDPL 239

Query: 275 RYVGDMLGWLHQALASERELVLGLLDPDVGDTGLTASQFSKSQNGSGKTDSDLTFVLDRI 334
           RYVGDML W+HQ +A+E+E +  L                         +     +LDRI
Sbjct: 240 RYVGDMLAWIHQTIANEKEFLESLFK--KVTKQGIEEN-------LQDLEDLDNKLLDRI 290

Query: 335 FEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAA 394
            EG+CRP ++R+EQVLQS+   II YK++N LEFY  T S  +G ++ L  TL  L++ +
Sbjct: 291 LEGLCRPLRIRIEQVLQSEEGAIILYKIANLLEFYRMTFSKGIGDDSQLVRTLGELEDLS 350

Query: 395 QKTYFDILKSRGEKLLRYPP-LVAADLSPPTAVRDGVSVLLEIIETHNSTMVPVSRETPD 453
           +  + + L+ +   LLR        DL PP  + D +S+L E+++ + +++VP+     D
Sbjct: 351 KSKFINSLEDQLSGLLRSNLEPPPDDLLPPEWLTDYLSLLKELLDIYEASLVPLDEREED 410

Query: 454 FNLVISALLDPIIQMCEQAAEAHKSKGAGHSSRRRLSSDSGNVSKSSVDAILSNSSSTPS 513
           F  V+S LLDP +QMC+ +AE  KS  A                                
Sbjct: 411 FAKVLSKLLDPPLQMCQLSAELLKSPDAK------------------------------- 439

Query: 514 SQSNETPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCG 573
                    IF+INCL  I+  L  +E + + ++ L + I+ HL  L + +  ++L R G
Sbjct: 440 --------LIFMINCLDLIKSTLSPYEFSDKRLEMLQAQIEAHLDTLTNLQASSLLERTG 491

Query: 574 LLPKMRHF-RSKEVSLPLAEIEDTSPTSLSE-------CLKAFFGLVLGSESSLPEFELL 625
           L         S +    L+      P SL          L +    V       P    L
Sbjct: 492 LSSYYNIINDSPDDKGDLSMYPALDPNSLMSAIQKLDDYLPSALSDV------QPNLLKL 545

Query: 626 QVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGHPDPKSLARHPPDQIRTIL 678
             P +  E C +      +AYE +Y+A++DP NG+ +P+SL    P+++RT+L
Sbjct: 546 TSPSIADEICKRSFELFVKAYESVYEALLDPYNGYENPESLLPRTPEEVRTLL 598

COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation. Length = 598

>gnl\|CDD\|219018 pfam06419, COG6, Conserved oligomeric complex COG6	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		680
PF06419		618	COG6: Conserved oligomeric complex COG6; InterPro:	100.0
KOG3758		655	consensus Uncharacterized conserved protein [Funct	100.0
PF04129		508	Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 V	99.87
KOG1961		683	consensus Vacuolar sorting protein VPS52/suppresso	99.82
PF09763		701	Sec3_C: Exocyst complex component Sec3; InterPro:	98.96
PF03081		371	Exo70: Exo70 exocyst complex subunit; InterPro: IP	98.51
KOG2344		623	consensus Exocyst component protein and related pr	97.96
PF10191		766	COG7: Golgi complex component 7 (COG7); InterPro:	96.4
PF04136		157	Sec34: Sec34-like family ; InterPro: IPR007265 Sec	93.94
PRK04778		569	septation ring formation regulator EzrA; Provision	90.14
PF07889		126	DUF1664: Protein of unknown function (DUF1664); In	84.74
PF10475		291	DUF2450: Protein of unknown function N-terminal do	81.52
PF09744		158	Jnk-SapK_ap_N: JNK_SAPK-associated protein-1; Inte	80.79

>PF06419 COG6: Conserved oligomeric complex COG6; InterPro: IPR010490 COG6 is a component of the conserved oligomeric golgi complex, which is composed of eight different subunits and is required for normal golgi morphology and localisation	Back alignment and domain information

Probab=100.00  E-value=1.3e-148  Score=1277.13  Aligned_cols=604  Identities=43%  Similarity=0.718  Sum_probs=577.9

Q ss_pred             HHHHHhhhhccCCCHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchHH
Q 043666           26 ASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFLQASSAAQQALDQVEEEVNSLAECCDRIEKALNSCNATTGNIIE  105 (680)
Q Consensus        26 ~aL~~Ls~~~~~nt~~aRr~LR~~iE~~~l~~n~~~L~~f~~v~~~l~~l~~~v~~l~~~c~~m~~~L~~~~~~t~~ll~  105 (680)
                      |||+.||+++..||+++||+||++||++++++|++||++|++|+++|++++++|++|+++|++|+++|..++.+|+++++
T Consensus         1 dal~~L~~~~~~nt~~aRr~LR~~iE~~~l~~~~~~L~~f~~v~~~l~~~~~~v~~l~~~~~~~~~~l~~~~~~t~~ll~   80 (618)
T PF06419_consen    1 DALKKLSEFGFENTLEARRNLRSDIEKRLLKINQEFLKEFSPVNRQLKRLQSDVDKLNSSCDQMQDRLSAAKSETSDLLE   80 (618)
T ss_pred             CcHHHhcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHhccCC--CCChhHHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHH
Q 043666          106 TTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDE--DLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMM  183 (680)
Q Consensus       106 e~~~L~~~~~~l~~K~~ll~~Fl~~F~Ls~~E~~~L~~~--~Vd~~FF~aL~rv~~I~~~c~~LL~~~~q~aGleiMe~~  183 (680)
                      +++.|+++++.++.|++++.+|+++||||++|+++|++|  |||++||+||+||++||+||++||+.++|+||++||++|
T Consensus        81 ~~~~L~~~~~~~~~k~~ll~~f~~~f~Ls~~E~~~L~~~~~~v~~~FF~~L~r~~~I~~~c~~LL~~~~~~ag~~iM~~~  160 (618)
T PF06419_consen   81 EASELREQKEELELKKKLLDAFLERFTLSEEEEDALTSGEEPVDDEFFDALDRVQKIHEDCKILLSTENQRAGLEIMEQM  160 (618)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Confidence            999999999999999999999999999999999999999  999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 043666          184 AMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGGPGGLP  263 (680)
Q Consensus       184 s~~~e~A~erL~~w~q~e~~~l~~~~~~e~~~~l~~al~~L~~rp~lf~~~ld~~a~~R~~~L~~~F~~aLt~g~~~g~~  263 (680)
                      ++++|+||||||+|+|++|+++ +.++|++++.+++|+++|++||+||++|+|+|+++||++|+++|++|||+|||||.|
T Consensus       161 ~~~~e~a~erl~~w~q~e~~~l-~~~~~~~~~~l~~al~~L~~rp~lf~~~l~~~~~~R~~~l~~~F~~aLt~g~~~~~~  239 (618)
T PF06419_consen  161 SKYLERAYERLYRWVQRECRSL-NLDNPEVSPLLRRALRYLRERPVLFNYCLDEFAEARSKALLRRFLDALTRGGPGGSP  239 (618)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh-hhcCcccchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence            9999999999999999999997 678999999999999999999999999999999999999999999999999999987


Q ss_pred             -CCccccccCcchhhhhHHHHHHHHhhhHHHHHHhhcCCCC--CCCCcccccccc-cCCCCCCCcchHHHHHHHHhhhcc
Q 043666          264 -RPIEVHAHDPLRYVGDMLGWLHQALASERELVLGLLDPDV--GDTGLTASQFSK-SQNGSGKTDSDLTFVLDRIFEGVC  339 (680)
Q Consensus       264 -rPIel~AhDP~RYvgDmLAwvHqaiasE~Efl~sLF~~~~--~~~~~~~~~~~~-~~~~~~~~~~~i~~lld~i~~gl~  339 (680)
                       ||||+|||||+||||||||||||++|+|+||+++||+++.  ...|+.++..++ |.      ...+.++||+|++|||
T Consensus       240 ~rPIel~AhDP~RYvGDmLAwvHq~~a~E~E~l~~Lf~~~~~~~~~~~~~~~~~~~~~------~~~~~~lld~i~~~l~  313 (618)
T PF06419_consen  240 SRPIELHAHDPLRYVGDMLAWVHQAIASEREFLESLFKFDEDEIAEGSSSGFDSNPWS------EELINELLDRILEGLC  313 (618)
T ss_pred             CCchhhhccChHHHHHHHHHHHHHHhhhHHHHHHHHhcccccccccccccccccccch------HHHHHHHHHHHHHHHh
Confidence             9999999999999999999999999999999999999875  223333333322 22      4588999999999999


Q ss_pred             chhHHHHHHHhhcCcchHHHHHHHhHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCC
Q 043666          340 RPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKEAAQKTYFDILKSRGEKLLRY-PPLVAA  418 (680)
Q Consensus       340 rplk~RvEqvl~s~~~~i~~yki~nLL~fY~~t~~k~i~~~s~L~~tl~~L~~~a~~~f~~~l~~~~~~l~~~-~~~~~~  418 (680)
                      ||||+||||||+++++++++|+|+|||.||+.||+|+||+++.|+.||.+|++.|+++|++++++++++++++ ++.||.
T Consensus       314 rplk~RvEQvi~se~~~i~~yki~~LL~fY~~~~~k~i~~~s~L~~tl~~L~~~a~~~f~~~l~~~~~~l~~~~~~~~~~  393 (618)
T PF06419_consen  314 RPLKIRVEQVISSEEDPITLYKIANLLSFYQMTFSKLIGEDSSLIETLKELQDLAQKKFFSSLRDHVAKLLRSAPEPPPA  393 (618)
T ss_pred             HHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999 999999


Q ss_pred             CCCCchHHHHHHHHHHHHHHHhhcCCCCCCCCC--CChHHHHHHhhhHHHHHHHHHHHhccCCCCCCCccccccCCCCCC
Q 043666          419 DLSPPTAVRDGVSVLLEIIETHNSTMVPVSRET--PDFNLVISALLDPIIQMCEQAAEAHKSKGAGHSSRRRLSSDSGNV  496 (680)
Q Consensus       419 DL~PP~~l~~~l~~L~eil~~~~~s~~~~~~~~--~~f~~vl~~~ldPli~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  496 (680)
                      ||+||+||.|+++.|++||++|++|+.+.++++  .+|++|+++++||++++|+++|..++++                 
T Consensus       394 DL~PP~~l~d~l~~L~~il~~~~~s~~~~~~~~~~~~~~~Il~~~idpll~~c~~~a~~L~~~-----------------  456 (618)
T PF06419_consen  394 DLSPPEWLIDFLSLLREILDVYDSSLSPDDDRENDNDFKPILDEPIDPLLQMCQKSASPLAPK-----------------  456 (618)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhhcccCCccchhhhhHHHHHHHHHhHHHHHHHHHHhhccCCh-----------------
Confidence            999999999999999999999999999987777  9999999999999999999999988554                 


Q ss_pred             ccchhhhhhcCCCCCCCCCCCCCcchHHHHhhHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Q 043666          497 SKSSVDAILSNSSSTPSSQSNETPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLP  576 (680)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~iNcl~~i~s~L~~~~f~~~~~~~L~~~i~~~~~~L~~~q~~~lL~~~GL~~  576 (680)
                                            ++++||+||||++|+++|+||+|+++++++|+++|++++++|+++|++++|++|||++
T Consensus       457 ----------------------~~~~if~iNCl~~i~s~L~~~~~~~~~~e~L~~~id~~~~~Lv~~Q~~~lL~~sGL~~  514 (618)
T PF06419_consen  457 ----------------------DDRAIFMINCLDLIQSTLSPFEFTSERVEELQDQIDAHVDTLVEEQASFLLERSGLGD  514 (618)
T ss_pred             ----------------------hhhHHHHHHhHHHHHHHccChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHH
Confidence                                  2358999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccc----cCCCCcccCCCCCHHHHHHHHHHhHhhhhcC-CCChhhhhhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 043666          577 KMRHFRSK----EVSLPLAEIEDTSPTSLSECLKAFFGLVLGS-ESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQ  651 (680)
Q Consensus       577 ~~~~~~~~----~~~~~ls~~p~~~~~~l~~~l~~f~~~L~s~-~~al~~l~~L~sp~l~~~i~~~~~~~~~~~Y~~i~~  651 (680)
                      +|++++|+    +.++|++++|+|++++|.+++++|++||+++ ++++|+|.+|+||++|+.|+++|++.||++|+.||+
T Consensus       515 ~~~~l~~i~~~~~~~~pls~~p~~~~~~l~~a~~kld~fL~sa~~d~~~~L~~L~Sp~l~~~I~~~a~~~f~~~Y~~v~~  594 (618)
T PF06419_consen  515 LYNALNMIFFDYDMYGPLSENPGMDPDSLSNALQKLDDFLPSALTDAQPNLFKLQSPKLRDDIRERAFERFCKAYEKVYE  594 (618)
T ss_pred             HHHHHHhhccCCcccCCcccCccCCHHHHHHHHHHHHHHHcccchhhhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999965    5678999999999999999999999999765 577899999999999999999999999999999999


Q ss_pred             HhcCCCCCCCCCCcccCCCHHHHHHhh
Q 043666          652 AIMDPKNGHPDPKSLARHPPDQIRTIL  678 (680)
Q Consensus       652 ~v~dp~n~y~~~~~~l~~tp~qv~~lL  678 (680)
                      +|+||.|||+   ++++|||+||++||
T Consensus       595 ~v~d~~n~y~---sl~~~tpeeI~~LL  618 (618)
T PF06419_consen  595 AVMDPDNGYE---SLFPRTPEEIRTLL  618 (618)
T ss_pred             HHhChhcccc---cccCCCHHHHhhcC
Confidence            9999999998   89999999999987

>KOG3758 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events []	Back alignment and domain information

>KOG1961 consensus Vacuolar sorting protein VPS52/suppressor of actin Sac2 [Intracellular trafficking, secretion, and vesicular transport; Cytoskeleton]	Back alignment and domain information

>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8	Back alignment and domain information

>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex	Back alignment and domain information

>KOG2344 consensus Exocyst component protein and related proteins [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []	Back alignment and domain information

>PF04136 Sec34: Sec34-like family ; InterPro: IPR007265 Sec34 and Sec35 form a sub-complex in a seven-protein complex that includes Dor1	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function	Back alignment and domain information

>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known	Back alignment and domain information

>PF09744 Jnk-SapK_ap_N: JNK_SAPK-associated protein-1; InterPro: IPR019143 This entry represents the N-terminal 200 residues of a set of proteins conserved from yeasts to humans	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		680
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-15
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-14

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 78.4 bits (192), Expect = 4e-15
 Identities = 85/617 (13%), Positives = 175/617 (28%), Gaps = 204/617 (33%)

Query: 113 DLDVNTQR---QEIVSCFLRDYQLSNEEINALRDEDLD----ESFFKALAHVQEIHANCK 165
           D +    +   ++I+S F   +            ++ D    +   K++   +EI     
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFV-----------DNFDCKDVQDMPKSILSKEEID---H 53

Query: 166 VLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLK 225
           +++        L L   +   QE   ++           + +         L + ++  +
Sbjct: 54  IIMSKDAVSGTLRLFWTLLSKQEEMVQKF----------VEEVLRINYK-FLMSPIKTEQ 102

Query: 226 ERP----VLFKYCAEEVANMRHNALFRRFLSALTRGGPGGLPRPIEVHAHDPLRYVGDML 281
            +P     ++    + + N   N +F              + R         LR      
Sbjct: 103 RQPSMMTRMYIEQRDRLYN--DNQVFA----------KYNVSRLQPYLK---LR------ 141

Query: 282 GWLHQALASERELVL-GLLDPDVGDTGLTASQFSKSQNGSGKTDSDLTFVLDRIFEGVCR 340
             L + L   + +++ G+L                   GSGKT       LD     VC 
Sbjct: 142 QALLE-LRPAKNVLIDGVL-------------------GSGKT----WVALD-----VCL 172

Query: 341 PFKVRVEQVLQSQPSLI--ISYKLSNTLEFYSYTISDLLGRETALCNTL---WVLKEAAQ 395
            +KV            I  ++ K  N+ E        +L     L   +   W  +    
Sbjct: 173 SYKV-----QCKMDFKIFWLNLKNCNSPE-------TVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 396 KTY---FDILKSRGEKLLRYPP-----LVAADLSPPTAVRDGVSVLLEIIET--HNSTMV 445
                    +++   +LL+  P     LV  +      V++      +       +  ++
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLN------VQNA-----KAWNAFNLSCKIL 269

Query: 446 PVSRETPDFNLVISALLDPIIQMCEQAAEAHKSKGAGHSSRRRLSSDSGNVSKSSVDAIL 505
             +R     + +                       A  ++   L   S  ++   V ++L
Sbjct: 270 LTTRFKQVTDFL----------------------SAATTTHISLDHHSMTLTPDEVKSLL 307

Query: 506 SNSSSTPSSQSNETPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRILVDKEV 565
                       + P ++   N       P     + AE +++  +  DN   +  DK  
Sbjct: 308 LKYLDCRPQ---DLPREVLTTN-------PRR-LSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 566 DTI-----------LRR----CGLLPKMRHFRSKEVSLPLA--------EIEDTSPTSLS 602
             I            R+      + P           +P           I+      ++
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFP-------PSAHIPTILLSLIWFDVIKSDVMVVVN 409

Query: 603 ECLKAFFGLVLG----SESSLPEFELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKN 658
           +  K  + LV      S  S+P   L    KL +E    + RS+ + Y  I +   D  +
Sbjct: 410 KLHK--YSLVEKQPKESTISIPSIYLELKVKLENEY--ALHRSIVDHY-NIPKT-FDSDD 463

Query: 659 GHPDPKS------LARH 669
             P          +  H
Sbjct: 464 LIPPYLDQYFYSHIGHH 480

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		680
2pft_A		571	Exocytosis protein; helix-turn-helix, endocytosis-	99.9
2b1e_A		564	Exocyst complex component EXO70; tethering complex	99.09

>2pft_A Exocytosis protein; helix-turn-helix, endocytosis-exocytosis complex; 2.25A {Mus musculus}	Back alignment and structure

Probab=99.90  E-value=1.6e-22  Score=231.02  Aligned_cols=452  Identities=13%  Similarity=0.133  Sum_probs=300.1

Q ss_pred             HhcccCCHHHHHhccCCC-CC-hhHHHHHHHHHHHHHHHHHhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043666          128 LRDYQLSNEEINALRDED-LD-ESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKL  205 (680)
Q Consensus       128 l~~F~Ls~~E~~~L~~~~-Vd-~~FF~aL~rv~~I~~~c~~LL~~~~q~aGleiMe~~s~~~e~A~erL~~w~q~e~~~l  205 (680)
                      +.+|..+.+++..|..|| .+ +.|.++++++++..+.-..    ++...+  -+..+...++.|..||-.-+..-+..-
T Consensus         6 ~~~~d~~~~~e~~i~~gp~~~l~~yL~av~~l~~a~~~~~~----~~~~s~--~l~~~~~Ll~~a~~~Le~eF~~lL~~~   79 (571)
T 2pft_A            6 ISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQKAVEYFQD----NSPDSP--ELNKVKLLFERGKESLESEFRSLMTRH   79 (571)
T ss_dssp             STHHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHHHHHHH----HSTTCH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHccchhhhhhhhcCcHhhHHHHHHHHHHHHHHHHHHHh----cCCChH--HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            445555666777788777 33 5999999999887554332    122222  166777778888777655444322110


Q ss_pred             c--------------C------------CCCccchHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHh----
Q 043666          206 G--------------D------------TENPEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALT----  255 (680)
Q Consensus       206 ~--------------~------------~~~~e~~~~l~~al~~L~~rp~lf~~~ld~~a~~R~~~L~~~F~~aLt----  255 (680)
                      .              +            .-.|++.+.|+....++..++- +++|++.|+..|+..|.+.+ .+|+    
T Consensus        80 ~~~~~p~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~Ia~~m~~~g~-~~~~~~~Y~~~R~~~l~~sL-~~L~~~~~  157 (571)
T 2pft_A           80 SKVVSPVLLLDLISADDELEVQEDVVLEHLPESVLRDVVRISRWLVEYGR-NQDFMNVYYQIRSSQLDRSI-KGLKEHFR  157 (571)
T ss_dssp             CCCCCHHHHHHHHHHTCCCC--------SSCHHHHHHHHHHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred             CcCCChHHHHhccccccccCccccccccCCCHHHHHHHHHHHHHHHHcCC-chHHHHHHHHHHHHHHHHHH-HHHHHHHh
Confidence            0              0            0123444667777777777765 79999999999999998888 7775    


Q ss_pred             --cCCCC------------C--CCCCccccc-cCcchhhhhHHHHHHHH------hhhHHHHHHhhcCCCCCCCCccccc
Q 043666          256 --RGGPG------------G--LPRPIEVHA-HDPLRYVGDMLGWLHQA------LASERELVLGLLDPDVGDTGLTASQ  312 (680)
Q Consensus       256 --~g~~~------------g--~~rPIel~A-hDP~RYvgDmLAwvHqa------iasE~Efl~sLF~~~~~~~~~~~~~  312 (680)
                        +||++            |  .++|+++|+ +||  |.++|-.|+|.+      +++|++++..+|..+          
T Consensus       158 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~~i~~wi~~~~~~~~l~~~Er~L~~~vf~~~----------  225 (571)
T 2pft_A          158 KSSSSSGVPYSPAIPNKRKDTPTKKPIKRPGRDDM--LDVETDAYIHCVSAFVKLAQSEYRLLMEIIPEH----------  225 (571)
T ss_dssp             HC-----------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHH----------
T ss_pred             hccccccccccccccccccccccccccccccchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcc----------
Confidence              23331            2  368899985 888  889999999998      999999999999432          


Q ss_pred             ccccCCCCCCCcchHHHHHHHHhhhccchh----HHHHHHHhh-cCcch--HHHHHHHhHHHHHHHHHHHhh-------C
Q 043666          313 FSKSQNGSGKTDSDLTFVLDRIFEGVCRPF----KVRVEQVLQ-SQPSL--IISYKLSNTLEFYSYTISDLL-------G  378 (680)
Q Consensus       313 ~~~~~~~~~~~~~~i~~lld~i~~gl~rpl----k~RvEqvl~-s~~~~--i~~yki~nLL~fY~~t~~k~i-------~  378 (680)
                                       .-+.+|.++|+|.    ..+.|+|.. ....+  -..|++.+|+.+|.. +.++.       +
T Consensus       226 -----------------~~~~~F~~i~~~~~~~ll~f~e~v~~~~kr~~~~~~~~~~l~l~~~l~~-l~~l~p~~~~~f~  287 (571)
T 2pft_A          226 -----------------HQKKTFDSLIQDALDGLMLEGENIVSAARKAIIRHDFSTVLTVFPILRH-LKQTKPEFDQVLQ  287 (571)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTTTHHHHHHH-HHHHHHHHHHHTT
T ss_pred             -----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhhHHHHHHHHHHHH-HHHHHHHHHHHHc
Confidence                             2356788888875    888999874 22111  234555566666654 33322       2


Q ss_pred             -C----CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCchHHHHHHHHHHHHHHHhhcCCCCC---
Q 043666          379 -R----ETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYP---PLVAADLSPPTAVRDGVSVLLEIIETHNSTMVPV---  447 (680)
Q Consensus       379 -~----~s~L~~tl~~L~~~a~~~f~~~l~~~~~~l~~~~---~~~~~DL~PP~~l~~~l~~L~eil~~~~~s~~~~---  447 (680)
                       .    .+.+..+++.|.+.+.+.|.+..+    .+.+.+   .++|.|-.+++.....++.|+.+++ |..++...   
T Consensus       288 g~~~~~~~~~~~~l~~L~~~~~~~f~ef~~----~i~~~~~s~~~vp~dg~Vh~lT~~vmnyl~~L~~-y~~~l~~il~~  362 (571)
T 2pft_A          288 GTAASTKNKLPGLITSMETIGAKALEDFAD----NIKNDPDKEYNMPKDGTVHELTSNAILFLQQLLD-FQETAGAMLAS  362 (571)
T ss_dssp             TSCHHHHTHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCSGGGSCTTCCCCHHHHHHHHHHHHHHH-THHHHHHHHHT
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhccccCCCCCCCCccchHHHHHHHHHHHHHh-hHHHHHHHHhc
Confidence             2    235778889999999999886663    333332   3456799999999999999999987 65433111   


Q ss_pred             -C-----------CCCCChHHHHHHhhhHHHHHHHHHHHhccCCCCCCCccccccCCCCCCccchhhhhhcCCCCCCCCC
Q 043666          448 -S-----------RETPDFNLVISALLDPIIQMCEQAAEAHKSKGAGHSSRRRLSSDSGNVSKSSVDAILSNSSSTPSSQ  515 (680)
Q Consensus       448 -~-----------~~~~~f~~vl~~~ldPli~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (680)
                       .           +....|...+..+++++..+++..++..+.+                                    
T Consensus       363 ~~~~~~~~~~~~~~~~~~l~~~i~~ii~~L~~~Le~ksk~y~d~------------------------------------  406 (571)
T 2pft_A          363 QETSSSATSYSSEFSKRLLSTYICKVLGNLQLNLLSKSKVYEDP------------------------------------  406 (571)
T ss_dssp             TC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSH------------------------------------
T ss_pred             cCCCcccccCCCCCcccHHHHHHHHHHHHHHHHHHHHHhhCCch------------------------------------
Confidence             0           0123577899999999999999888776322                                    


Q ss_pred             CCCCcchHHHHhhHHHHhhccccchhh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHhccccCCC
Q 043666          516 SNETPSKIFLINCLCAIQQPLIGHEVA-------AEYVKNLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSL  588 (680)
Q Consensus       516 ~~~~~~~i~~iNcl~~i~s~L~~~~f~-------~~~~~~L~~~i~~~~~~L~~~q~~~lL~~~GL~~~~~~~~~~~~~~  588 (680)
                         ..+.||++||+.+|...+...+..       .+++..+..+++.+++.        .  +.+..+++..+...+...
T Consensus       407 ---~l~~iFLmNN~~yI~~~v~~s~l~~llg~~~~~~~~~~~~~i~~~~~~--------Y--~~sW~~v~~~L~~~~~~~  473 (571)
T 2pft_A          407 ---ALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAERSYREHIEQQIQT--------Y--QRSWLKVTDYIAEKNLPV  473 (571)
T ss_dssp             ---HHHHHHHHHHHHHHHTTTTTSTHHHHHHTTCTTHHHHHHHHHHHHHHH--------H--HGGGHHHHTTTSGGGSCS
T ss_pred             ---HHHHHHHHhhHHHHHHHHhccchHHHhCcchhHHHHHHHHHHHHHHHH--------H--HHHHHHHHHHhhhccCCc
Confidence               127899999999999999886642       34444455555544442        2  447778777776522111


Q ss_pred             Cccc--CCCCCHHHHHHHHHHhHhhhhcCCCChhhh------hhccChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 043666          589 PLAE--IEDTSPTSLSECLKAFFGLVLGSESSLPEF------ELLQVPKLRSEACIQVARSLAEAYEQIYQAIMDPKNGH  660 (680)
Q Consensus       589 ~ls~--~p~~~~~~l~~~l~~f~~~L~s~~~al~~l------~~L~sp~l~~~i~~~~~~~~~~~Y~~i~~~v~dp~n~y  660 (680)
                      +.+.  .++.+.+.|++.++.|...+       .++      -.+.+|.+|+.++..+.+.+.-+|+..|++..++ +++
T Consensus       474 ~~~g~~ls~~~r~~iKe~fk~Fn~~F-------ee~~~~q~~w~VpD~~LR~~Lr~~i~~~v~paY~~F~~r~~~~-~~~  545 (571)
T 2pft_A          474 FQPGVKLRDKERQMIKERFKGFNDGL-------EELCKIQKVWAIPDTEQRDKIRQAQKDIVKETYGAFLHRYGSV-PFT  545 (571)
T ss_dssp             SCCCSCCCHHHHHHHHHHHHHHHHHH-------HHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CCC
T ss_pred             CCCCCCcCcccHHHHHHHHHHHHHHH-------HHHHHhCCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-ccc
Confidence            1111  23345678888888886532       222      2578999999999999999999999999999995 777


Q ss_pred             CCCCcccCCCHHHHHHhhc
Q 043666          661 PDPKSLARHPPDQIRTILG  679 (680)
Q Consensus       661 ~~~~~~l~~tp~qv~~lL~  679 (680)
                      .+++..++||||+|.++|+
T Consensus       546 k~~~KyiKytpe~le~~L~  564 (571)
T 2pft_A          546 KNPEKYIKYRVEQVGDMID  564 (571)
T ss_dssp             SCHHHHCCCCHHHHHHHHH
T ss_pred             CCCCCccccCHHHHHHHHH
Confidence            8888899999999999875

PyMOL of 2pft

>2b1e_A Exocyst complex component EXO70; tethering complex, endocytosis/exocytosis complex; 2.00A {Saccharomyces cerevisiae} PDB: 2b7m_A 2pfv_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		680
d2b7ma1		551	a.118.17.2 (A:73-623) Exocyst complex component EX	1e-04

>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 551	Back information, alignment and structure


class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO70
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 45/378 (11%), Positives = 115/378 (30%), Gaps = 45/378 (11%)

Query: 325 SDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLI---ISYKLSNTLEFYSYTISDLLGR-- 379
           S  T     +   +  P      ++  +   ++   +      + E    +I+D+     
Sbjct: 190 SQYTESKPHVLSQILSPLISAYAKLFGANLKIVRSNLENFGFFSFELVE-SINDVKKSLR 248

Query: 380 ------ETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLSPPTAVRDGVSVL 433
                    L +    +++  Q  + D +    +K      + + +     A  D +S L
Sbjct: 249 GKELQNYNLLQDCTQEVRQVTQSLFRDAIDRIIKKANSISTIPS-NNGVTEATVDTMSRL 307

Query: 434 LEIIETHNSTMVPVSRETPDFN-LVISALLDPIIQMCEQAAEAHKSKGAGHSSRRRLSSD 492
            +  E + +  +         N L  +          E       +          + + 
Sbjct: 308 RKFSE-YKNGCLGAMDNITRENWLPSNYKEKEYTLQNEALNWEDHNVLLSCFISDCIDTL 366

Query: 493 SGNV---SKSSVDAILSNSSSTPSSQSNETPSK--IFLINCLCAIQQPLIGHEVAAEYVK 547
           + N+   ++ ++        + P+S  N+   +   F++  L  ++Q +   E+      
Sbjct: 367 AVNLERKAQIALMPNQEPDVANPNSSKNKHKQRIGFFILMNLTLVEQIVEKSELNLM--- 423

Query: 548 NLGSMIDNHLRILVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEIEDTSPTSLSECLKA 607
            L     + L  L  + +  ++        +       V +  +  +      + E  + 
Sbjct: 424 -LAGEGHSRLERLKKRYISYMVSDWR---DLTANLMDSVFIDSSGKKSKDKEQIKEKFRK 479

Query: 608 FFGLVLGSESSLPEFELLQV------PKLRSEACIQVARSLAEAYEQIYQAIMD-PKNGH 660
           F            +            P L+     ++   +   YE+ Y    D  KN  
Sbjct: 480 FN-------EGFEDLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFYSRYKDSFKN-- 530

Query: 661 PDPKSLARHPPDQIRTIL 678
             P+   ++ PD++ T+L
Sbjct: 531 --PRKHIKYTPDELTTVL 546

PyMOL of d2b7ma1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		680
d2b7ma1		551	Exocyst complex component EXO70 {Baker's yeast (Sa	99.42

>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO70
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.42  E-value=4.1e-10  Score=125.26  Aligned_cols=477  Identities=12%  Similarity=0.103  Sum_probs=263.0

Q ss_pred             HHHHHhccCCC--CC-hhHHHHHHHHHHHHHHHHHhh-cccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--
Q 043666          135 NEEINALRDED--LD-ESFFKALAHVQEIHANCKVLL-RTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDT--  208 (680)
Q Consensus       135 ~~E~~~L~~~~--Vd-~~FF~aL~rv~~I~~~c~~LL-~~~~q~aGleiMe~~s~~~e~A~erL~~w~q~e~~~l~~~--  208 (680)
                      ..|+.+|+.||  ++ +.|+++|+|+++..++-+..- ......-...|+..+...++.|..+|-.+.++-++.....  
T Consensus        10 s~~E~ii~~g~~~~~L~~Yl~al~rl~~al~~l~~~~~~~~~~~~~~gil~~l~~L~~~g~~~Le~~F~~lL~~~~p~~p   89 (551)
T d2b7ma1          10 SKYEIILQKGINQVGLKQYTQVVHKLDDMLEDIQSGQANREENSEFHGILTHLEQLIKRSEAQLRVYFISILNSIKPFDP   89 (551)
T ss_dssp             HHHHHHHTSCGGGSTHHHHHHHHHHHHHHHHTTTSTTTSCTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCT
T ss_pred             HHHHHHHHcCcccccHHHHHHHHHHHHHHHHHHHhcCcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCc
Confidence            35677888776  44 699999999999887766442 1122333567899999999999999988888776542100  


Q ss_pred             --------CC----ccchHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCC--CCccccccCc
Q 043666          209 --------EN----PEVGELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFLSALTRGG-PGGLP--RPIEVHAHDP  273 (680)
Q Consensus       209 --------~~----~e~~~~l~~al~~L~~rp~lf~~~ld~~a~~R~~~L~~~F~~aLt~g~-~~g~~--rPIel~AhDP  273 (680)
                              .-    ++...-|+.=..+|... .+-++|++.|+..|+..+.+. +..|.... +.+..  -|-+-..+-=
T Consensus        90 ~~~~~k~~~~p~~~~~~~~~L~~Ia~~l~~~-~~~~~~~~iY~~~R~~~l~~s-L~~L~~~~~s~~~~~~~~y~~~~~~i  167 (551)
T d2b7ma1          90 QINITKKMPFPYYEDQQLGALSWILDYFHGN-SEGSIIQDILVGERSKLILKC-MAFLEPFAKEISTAKNAPYEKGSSGM  167 (551)
T ss_dssp             HHHHHTCCCCCCCCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHHH-HTTTGGGGCC------------CCHH
T ss_pred             hhhhccCCCCCCCCHHHHHHHHHHHHHHHhC-CCCcHHHHHHHHHHHHHHHHH-HHHhhhhhcchhhhccCchhhhhHHH
Confidence                    11    12223344444444433 345889999999999999764 22233110 00000  1111111111


Q ss_pred             chhhhhHHHHHHHHhhhHHHHHHhhcCCCCCCCCcccccccccCCCCCCCcchHHHHHHHHhhhccchhHHHHHHHhhcC
Q 043666          274 LRYVGDMLGWLHQALASERELVLGLLDPDVGDTGLTASQFSKSQNGSGKTDSDLTFVLDRIFEGVCRPFKVRVEQVLQSQ  353 (680)
Q Consensus       274 ~RYvgDmLAwvHqaiasE~Efl~sLF~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lld~i~~gl~rplk~RvEqvl~s~  353 (680)
                      .+|+.-    +...+++|++++..+|.....                     .-..++..++.+.-.-+....+.+...-
T Consensus       168 ~~~~~a----v~~l~~~E~~l~~~if~~~~~---------------------~~~~~f~~i~~~~i~~~~~~~~~i~~~~  222 (551)
T d2b7ma1         168 NSYTEA----LLGFIANEKSLVDDLYSQYTE---------------------SKPHVLSQILSPLISAYAKLFGANLKIV  222 (551)
T ss_dssp             HHHHHH----HHHHHHHHHHHHHHHCSSCTT---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH----HHHHHHHHHHHHHHHhCCcch---------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            123321    234789999999999964310                     1123444443332222222334333221


Q ss_pred             c-----chHHHHHHHhHHHHHHHHHHHhhC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCchHHH
Q 043666          354 P-----SLIISYKLSNTLEFYSYTISDLLG-RETALCNTLWVLKEAAQKTYFDILKSRGEKLLRYPPLVAADLSPPTAVR  427 (680)
Q Consensus       354 ~-----~~i~~yki~nLL~fY~~t~~k~i~-~~s~L~~tl~~L~~~a~~~f~~~l~~~~~~l~~~~~~~~~DL~PP~~l~  427 (680)
                      .     +...+|.|+..+.-.+..+....+ ..+.+...+..|.+.+...|.+.++.--.+.. ..+..|.|=..++...
T Consensus       223 k~~~~~~~f~~ld~~e~l~~l~~~~~~~~~~~~~~~~~~l~~L~~~~~~~f~ef~~~i~~~~~-~~~~lP~dG~Vh~lT~  301 (551)
T d2b7ma1         223 RSNLENFGFFSFELVESINDVKKSLRGKELQNYNLLQDCTQEVRQVTQSLFRDAIDRIIKKAN-SISTIPSNNGVTEATV  301 (551)
T ss_dssp             HHCHHHHTTHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHT-TSCSCCTTSCCCHHHH
T ss_pred             hccchhhHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCCcCCCCCCcChhHH
Confidence            1     224555665555444444444222 33458889999999999999887764444332 2233456777888888


Q ss_pred             HHHHHHHHHHHHhhcCCC---C---------C------------CCC----CCChHHHHHHhhhHHHHHHHHHHHhccCC
Q 043666          428 DGVSVLLEIIETHNSTMV---P---------V------------SRE----TPDFNLVISALLDPIIQMCEQAAEAHKSK  479 (680)
Q Consensus       428 ~~l~~L~eil~~~~~s~~---~---------~------------~~~----~~~f~~vl~~~ldPli~~~~~~a~~~~~~  479 (680)
                      ++++.|+.+.+ |..++.   .         .            ...    +.-+...+.-+++.++.+++.-+.....+
T Consensus       302 ~vm~yL~~L~e-Y~~~l~~il~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ls~~i~~vi~~L~~nLe~kak~y~d~  380 (551)
T d2b7ma1         302 DTMSRLRKFSE-YKNGCLGAMDNITRENWLPSNYKEKEYTLQNEALNWEDHNVLLSCFISDCIDTLAVNLERKAQIALMP  380 (551)
T ss_dssp             HHHHHHHHHHT-THHHHHHTTTTCCGGGGSCSSCCGGGSCCCCCCSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHh-hHHHHHHHHHhcccCCCCcccccCCCccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            88888887775 322110   0         0            001    11245566777888888888777766443


Q ss_pred             CCCCCccccccCCCCCCccchhhhhhcCCCCCCCCCCCCCcchHHHHhhHHHHhhccccchhhHHHHHHHHHHHHHHHHH
Q 043666          480 GAGHSSRRRLSSDSGNVSKSSVDAILSNSSSTPSSQSNETPSKIFLINCLCAIQQPLIGHEVAAEYVKNLGSMIDNHLRI  559 (680)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~iNcl~~i~s~L~~~~f~~~~~~~L~~~i~~~~~~  559 (680)
                      +..+.                    .++|.++  ....++-..||++|++.+|...+..=+    -...|.+.-....++
T Consensus       381 ~l~~~--------------------~~~~~~~--~~~~~~~~~iFlmNN~~yI~~~v~~Se----L~~lLg~~~~~~~~~  434 (551)
T d2b7ma1         381 NQEPD--------------------VANPNSS--KNKHKQRIGFFILMNLTLVEQIVEKSE----LNLMLAGEGHSRLER  434 (551)
T ss_dssp             SSCCC--------------------CSCTTCS--SCCCHHHHHHHHHHHHHHHHHHHHTSH----HHHHHTTHHHHHHHH
T ss_pred             hhhhc--------------------ccccccc--cccchhhhhHHHHhhHHHHHHHHHhhh----HHHHhhHHHHHHHHH
Confidence            32111                    0011111  123445578999999999998886533    122232222222345


Q ss_pred             HHHHHHHHHHHhcCChHHHHHhccccCCCCcccCCCCCHHHHHHHHHHhHhhhhcCCCChhhhh------hccChHHHHH
Q 043666          560 LVDKEVDTILRRCGLLPKMRHFRSKEVSLPLAEIEDTSPTSLSECLKAFFGLVLGSESSLPEFE------LLQVPKLRSE  633 (680)
Q Consensus       560 L~~~q~~~lL~~~GL~~~~~~~~~~~~~~~ls~~p~~~~~~l~~~l~~f~~~L~s~~~al~~l~------~L~sp~l~~~  633 (680)
                      +.+...+...+.+  ..+...+...+ ..+-+.....+.+.|++..+.|..-       +.++.      .+.+|.+|+.
T Consensus       435 ~~~~~~~y~~~~W--~~v~~~L~d~~-~~~~~~~~sk~k~~iKekFk~FN~~-------Fee~~~~q~~~~i~D~~LR~~  504 (551)
T d2b7ma1         435 LKKRYISYMVSDW--RDLTANLMDSV-FIDSSGKKSKDKEQIKEKFRKFNEG-------FEDLVSKTKQYKLSDPSLKVT  504 (551)
T ss_dssp             HHHHHHHHHTHHH--HHHHHHTC---------------------------CH-------HHHHHHHHTTCCCSCHHHHHH
T ss_pred             HHHHHHHHHHHHH--HHHHHHhhhcc-cCCCCCCCCccHHHHHHHHHHHHHH-------HHHHHHHhCCccCcCHHHHHH
Confidence            5555555555544  34444443211 0111112234556777766666543       23332      5779999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccCCCHHHHHHhhc
Q 043666          634 ACIQVARSLAEAYEQIYQAIMDPKNGHPDPKSLARHPPDQIRTILG  679 (680)
Q Consensus       634 i~~~~~~~~~~~Y~~i~~~v~dp~n~y~~~~~~l~~tp~qv~~lL~  679 (680)
                      ++..+.+.+.-+|...|++..|-   -.+++--++|||++|..+|+
T Consensus       505 L~~~i~~~v~p~Y~~F~~ry~~~---~k~~~KyiKY~p~~le~~L~  547 (551)
T d2b7ma1         505 LKSEIISLVMPMYERFYSRYKDS---FKNPRKHIKYTPDELTTVLN  547 (551)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCS---SSCSTTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccc---CCCCCceeccCHHHHHHHHH
Confidence            99999999999999999999652   24566679999999999875

PyMOL of d2b7ma1