Citrus Sinensis ID: 043679


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
MSQQFYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQRADDPSRPLTFPSVRMRPDINGSSIFKNVPKFFNTVFNTASDFCWSMIKSSLIEDDKTPIRS
cccccHHHHHHHHHHHHHcccccccccccEEEEEEcccccccEEEEEEEHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
cccccHHHHHHHHHHHHHccccccccccEEEEEEEccccHHHHHHHEEEHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
MSQQFYDKCLQDYLSKLsaeempqsqplwEVHIvkyptsnaagSVIFKLHHALGDGFSLMGALLSCLqraddpsrpltfpsvrmrpdingssifknvPKFFNTVFNTASDFCWSMIKsslieddktpirs
MSQQFYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQRADDPSRPLTFPSVRMRPDINGSSIFKNVPKFFNTVFNTASDFCWSMIksslieddktpirs
MSQQFYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQRADDPSRPLTFPSVRMRPDINGSSIFKNVPKFFNTVFNTASDFCWSMIKSSLIEDDKTPIRS
*****YDKCLQDYL************PLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQR*****************DINGSSIFKNVPKFFNTVFNTASDFCWSMIKSSL**********
****FYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQ***************************NVPKFFNTVFNTASDFCWSMIKSSLIEDDKT****
MSQQFYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQRADDPSRPLTFPSVRMRPDINGSSIFKNVPKFFNTVFNTASDFCWSMIKSSLIE********
***QFYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQRADDPSRPLTFPSVRMRPDINGSSIFKNVPKFFNTVFNTASDFCWSMIKSSLIEDDKT****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiii
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSQQFYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQRADDPSRPLTFPSVRMRPDINGSSIFKNVPKFFNTVFNTASDFCWSMIKSSLIEDDKTPIRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query130 2.2.26 [Sep-21-2011]
Q93ZR6 481 O-acyltransferase WSD1 OS no no 0.938 0.253 0.325 1e-13
>sp|Q93ZR6|WSD1_ARATH O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1 Back     alignment and function desciption
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 7   DKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSC 66
           D+ ++DY S ++   M  S+PLWE H++   TS A    I K+HH++GDG SLM  LL+C
Sbjct: 103 DQFVEDYTSNIANIPMDMSKPLWEFHLLNMKTSKAESLAIVKIHHSIGDGMSLMSLLLAC 162

Query: 67  LQRADDPSRPLTFPSVRMRP-DINGSSIFKNVPKFFNTVFNTASDFCWSMIKSSLIEDDK 125
            ++  DP   ++  +   +P D     +F          F T  +F   M+    +ED K
Sbjct: 163 SRKISDPDALVSNTTATKKPADSMAWWLFVGFWFMIRVTFTTIVEFSKLMLTVCFLEDTK 222

Query: 126 TPI 128
            P+
Sbjct: 223 NPL 225




Bifunctional wax ester synthase/diacylglycerol acyltransferase. Involved in cuticular wax biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query130
224140679 473 predicted protein [Populus trichocarpa] 1.0 0.274 0.689 2e-48
224141097 422 predicted protein [Populus trichocarpa] 1.0 0.308 0.674 2e-47
224095483 474 predicted protein [Populus trichocarpa] 1.0 0.274 0.659 2e-47
225446392 473 PREDICTED: O-acyltransferase WSD1 [Vitis 1.0 0.274 0.610 2e-44
302143306 494 unnamed protein product [Vitis vinifera] 1.0 0.263 0.610 3e-44
147781339 438 hypothetical protein VITISV_043611 [Viti 1.0 0.296 0.603 5e-43
255553705 483 conserved hypothetical protein [Ricinus 1.0 0.269 0.609 9e-42
357501753 471 O-acyltransferase WSD1 [Medicago truncat 0.976 0.269 0.632 1e-41
224140677 473 predicted protein [Populus trichocarpa] 1.0 0.274 0.606 4e-41
356567032 465 PREDICTED: O-acyltransferase WSD1-like [ 0.961 0.268 0.587 2e-38
>gi|224140679|ref|XP_002323706.1| predicted protein [Populus trichocarpa] gi|222866708|gb|EEF03839.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/132 (68%), Positives = 111/132 (84%), Gaps = 2/132 (1%)

Query: 1   MSQQFYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLM 60
           MS QFYD+C  +YLSK + E++PQSQPLWEVHI+ YPTS+AA ++IFKLHH+LGDGFSLM
Sbjct: 93  MSTQFYDECFDEYLSKTAMEQLPQSQPLWEVHIINYPTSHAASNMIFKLHHSLGDGFSLM 152

Query: 61  GALLSCLQRADDPSRPLTFPSVRMRPDING--SSIFKNVPKFFNTVFNTASDFCWSMIKS 118
           GALLSCLQRAD P  PLTFPSV +  +  G  SS+F+ VP+FF++V+NTASDFC S IKS
Sbjct: 153 GALLSCLQRADAPPLPLTFPSVHLHTNTYGRNSSMFRKVPRFFSSVYNTASDFCSSFIKS 212

Query: 119 SLIEDDKTPIRS 130
            L++DDKTPIRS
Sbjct: 213 CLVKDDKTPIRS 224




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141097|ref|XP_002323911.1| predicted protein [Populus trichocarpa] gi|222866913|gb|EEF04044.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224095483|ref|XP_002310400.1| predicted protein [Populus trichocarpa] gi|222853303|gb|EEE90850.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225446392|ref|XP_002274522.1| PREDICTED: O-acyltransferase WSD1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143306|emb|CBI21867.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147781339|emb|CAN62907.1| hypothetical protein VITISV_043611 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255553705|ref|XP_002517893.1| conserved hypothetical protein [Ricinus communis] gi|223542875|gb|EEF44411.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|357501753|ref|XP_003621165.1| O-acyltransferase WSD1 [Medicago truncatula] gi|355496180|gb|AES77383.1| O-acyltransferase WSD1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|224140677|ref|XP_002323705.1| predicted protein [Populus trichocarpa] gi|222866707|gb|EEF03838.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356567032|ref|XP_003551727.1| PREDICTED: O-acyltransferase WSD1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query130
TAIR|locus:2154287 486 FOP1 "FOLDED PETAL 1" [Arabido 0.930 0.248 0.366 1.1e-15
TAIR|locus:2169175 481 WSD1 [Arabidopsis thaliana (ta 0.938 0.253 0.325 2.8e-14
TAIR|locus:2171152 482 AT5G22490 [Arabidopsis thalian 0.923 0.248 0.317 7.3e-13
TAIR|locus:2030332 479 AT1G72110 [Arabidopsis thalian 0.561 0.152 0.438 1.5e-12
TAIR|locus:505006610 480 AT5G12420 [Arabidopsis thalian 0.923 0.25 0.297 2e-12
TAIR|locus:2082921 507 AT3G49200 [Arabidopsis thalian 0.746 0.191 0.343 2.2e-12
TAIR|locus:2082936 518 AT3G49210 [Arabidopsis thalian 0.946 0.237 0.303 2.1e-11
TAIR|locus:2154282 483 AT5G53380 [Arabidopsis thalian 0.930 0.250 0.303 2.4e-11
TAIR|locus:2171372 488 AT5G16350 [Arabidopsis thalian 0.915 0.243 0.284 6.7e-11
TAIR|locus:2082906 522 AT3G49190 [Arabidopsis thalian 0.923 0.229 0.295 7.5e-11
TAIR|locus:2154287 FOP1 "FOLDED PETAL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 204 (76.9 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 48/131 (36%), Positives = 69/131 (52%)

Query:     7 DKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSC 66
             D+ L+DY+SKL+   M  S+PLWE+H++   TSNA    I K+HH+LGDG SLM  LL+C
Sbjct:   100 DQYLEDYISKLTTIPMDLSKPLWEMHLLGVKTSNAESYAILKIHHSLGDGMSLMSLLLAC 159

Query:    67 LQRADDPSR-P-LTFPSVRMRPDINGSSIFKNVPKFF-------NTVFNTASDFCWSMIK 117
              ++  DP   P +     R  P  N S  F  +   F         +FNT  D     + 
Sbjct:   160 TRKTSDPEALPTVAVHKKRFGPSCN-SGFFNKIWWLFVGLWFILRLLFNTFVDILMFALT 218

Query:   118 SSLIEDDKTPI 128
               ++ D +TP+
Sbjct:   219 IFVLRDTETPL 229




GO:0004144 "diacylglycerol O-acyltransferase activity" evidence=IEA
GO:0005634 "nucleus" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
GO:0048446 "petal morphogenesis" evidence=IMP
TAIR|locus:2169175 WSD1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171152 AT5G22490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030332 AT1G72110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006610 AT5G12420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082921 AT3G49200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082936 AT3G49210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154282 AT5G53380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171372 AT5G16350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082906 AT3G49190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query130
TIGR02946 446 TIGR02946, acyl_WS_DGAT, acyltransferase, WS/DGAT/ 3e-11
pfam03007263 pfam03007, WES_acyltransf, Wax ester synthase-like 1e-05
>gnl|CDD|234068 TIGR02946, acyl_WS_DGAT, acyltransferase, WS/DGAT/MGAT Back     alignment and domain information
 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 10  LQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGS---VIFKLHHALGDGFSLMGALLSC 66
           L + + +L +  + +S+PLWE+H++       AG    V+ K+HHAL DG + +  L   
Sbjct: 91  LLELVGRLMSTPLDRSRPLWEMHLI----EGLAGGRFAVLTKVHHALADGVAGLRLLARL 146

Query: 67  LQRADDPSRPLTFPSVRMRP 86
           L    DP  PL  P    +P
Sbjct: 147 LDDDPDPP-PLPAPPPPPQP 165


This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase [Unknown function, Enzymes of unknown specificity]. Length = 446

>gnl|CDD|111851 pfam03007, WES_acyltransf, Wax ester synthase-like Acyl-CoA acyltransferase domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 130
PF03007263 WES_acyltransf: Wax ester synthase-like Acyl-CoA a 99.87
TIGR02946 446 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b 99.39
PF07247 480 AATase: Alcohol acetyltransferase; InterPro: IPR01 98.52
PF00668301 Condensation: Condensation domain; InterPro: IPR00 97.95
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 97.16
PRK12467 3956 peptide synthase; Provisional 96.35
PRK12316 5163 peptide synthase; Provisional 96.23
PRK09294 416 acyltransferase PapA5; Provisional 95.97
PRK12467 3956 peptide synthase; Provisional 95.94
PRK05691 4334 peptide synthase; Validated 95.31
COG4908 439 Uncharacterized protein containing a NRPS condensa 95.3
PRK05691 4334 peptide synthase; Validated 95.3
PRK12316 5163 peptide synthase; Provisional 94.86
PLN00140 444 alcohol acetyltransferase family protein; Provisio 93.39
PLN02663 431 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn 92.27
PF02458 432 Transferase: Transferase family; InterPro: IPR0034 91.6
PLN03157 447 spermidine hydroxycinnamoyl transferase; Provision 90.34
PLN02481 436 Omega-hydroxypalmitate O-feruloyl transferase 90.01
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins Back     alignment and domain information
Probab=99.87  E-value=2.4e-21  Score=155.05  Aligned_cols=75  Identities=37%  Similarity=0.617  Sum_probs=68.5

Q ss_pred             hHHHHHHHHHHHhcCCCCCCCcceeeeeeecCCCCCceEEEEEeccccccHHHHHHHHHHhhCCCCCCCCCCCCCC
Q 043679            6 YDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQRADDPSRPLTFPS   81 (130)
Q Consensus         6 ~d~~L~~~vs~l~~~pld~~rPlWe~~vl~~~~~~~~~a~v~k~HHal~DG~sl~~ll~~~~~~~~dp~~~~~~p~   81 (130)
                      ++++|++++++++++|||++|||||+|+|+|+.++ ++|+++|+|||++||+++++++.++++..+++...+..+.
T Consensus        93 ~~~~l~~~v~~l~~~pLd~~rPlWe~~li~g~~~g-~~Al~~k~HHal~DG~~~~~l~~~l~~~~~~~~~~~~~~~  167 (263)
T PF03007_consen   93 DRAELQALVSRLASTPLDRSRPLWEVHLIEGLEGG-RFALVLKVHHALADGVSLMRLLAALLDRSPDPPPPPPPPR  167 (263)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCcEEEEEecCCCC-cEEEEEeehhhhhhhHhHHHHHHHHhCCCCCCCCCCCCcc
Confidence            57899999999999999999999999999999877 7999999999999999999999999999888877655543



O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity

>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT Back     alignment and domain information
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 Back     alignment and domain information
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK09294 acyltransferase PapA5; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PLN00140 alcohol acetyltransferase family protein; Provisional Back     alignment and domain information
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes Back     alignment and domain information
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query130
1l5a_A 436 Amide synthase, VIBH; nonribosomal peptide synthet 98.3
4hvm_A 493 Tlmii; PSI-biology, midwest center for structural 98.23
1q9j_A 422 PAPA5, polyketide synthase associated protein 5; c 97.88
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 97.83
2jgp_A 520 Tyrocidine synthetase 3; multifunctional enzyme, a 97.81
2xhg_A 466 Tyrocidine synthetase A; isomerase, nonribosomal p 97.64
3fot_A 519 15-O-acetyltransferase; fusarium head blight, tric 95.15
2bgh_A 421 Vinorine synthase; VS, BAHD, acetyltransferase, au 93.08
2rkv_A 451 Trichothecene 3-O-acetyltransferase; BAHD superfam 90.37
2e1v_A 454 Acyl transferase; BAHD superfamily, seleno-methion 90.27
4g22_A 439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 90.03
2xr7_A 453 Malonyltransferase; xenobiotics, naphthols; HET: M 88.75
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
Probab=98.30  E-value=1.6e-06  Score=69.79  Aligned_cols=60  Identities=10%  Similarity=0.087  Sum_probs=49.4

Q ss_pred             hhHHHHHHHHHHHhcCCCCCCC-cceeeeeeecCCCCCceEEEEEeccccccHHHHHHHHHHh
Q 043679            5 FYDKCLQDYLSKLSAEEMPQSQ-PLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSC   66 (130)
Q Consensus         5 ~~d~~L~~~vs~l~~~pld~~r-PlWe~~vl~~~~~~~~~a~v~k~HHal~DG~sl~~ll~~~   66 (130)
                      +.++++++++.+...+|+|..+ |+|++.++..-  +++..+++.+||++.||.|+.-++..+
T Consensus        81 ~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~--~~~~~l~~~~HH~i~Dg~S~~~l~~~l  141 (436)
T 1l5a_A           81 EAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLS--HSEHLIYTRAHHIVLDGYGMMLFEQRL  141 (436)
T ss_dssp             THHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEEE--TTEEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEEEc--CCEEEEEEeehhheecHhHHHHHHHHH
Confidence            3456799999999999999865 99999999742  236889999999999999987665443



>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* Back     alignment and structure
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Back     alignment and structure
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query130
d1l5aa1174 VibH {Vibrio cholerae [TaxId: 666]} 97.99
d1q9ja1175 Polyketide synthase associated protein 5, PapA5 {M 97.56
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: VibH
species: Vibrio cholerae [TaxId: 666]
Probab=97.99  E-value=1e-05  Score=56.89  Aligned_cols=61  Identities=10%  Similarity=0.068  Sum_probs=47.9

Q ss_pred             hhHHHHHHHHHHHhcCCCCCC-CcceeeeeeecCCCCCceEEEEEeccccccHHHHHHHHHHhh
Q 043679            5 FYDKCLQDYLSKLSAEEMPQS-QPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCL   67 (130)
Q Consensus         5 ~~d~~L~~~vs~l~~~pld~~-rPlWe~~vl~~~~~~~~~a~v~k~HHal~DG~sl~~ll~~~~   67 (130)
                      +++++..+.+.+....|+|.. .|++++.++...  +++..+++.+||.+.||.|+.-++..+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~dl~~~pl~r~~l~~~~--~~~~~l~~~~hHii~Dg~S~~~l~~el~  142 (174)
T d1l5aa1          81 EAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLS--HSEHLIYTRAHHIVLDGYGMMLFEQRLS  142 (174)
T ss_dssp             THHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEEE--TTEEEEEEEEETTTCCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhCCccccCCCcEEEEEEEeC--CCceEEeeecccEEEcHhHHHHHHHHHH
Confidence            346666777788888999975 599999999742  2368899999999999999987766543



>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure