Citrus Sinensis ID: 043679
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 130 | ||||||
| 224140679 | 473 | predicted protein [Populus trichocarpa] | 1.0 | 0.274 | 0.689 | 2e-48 | |
| 224141097 | 422 | predicted protein [Populus trichocarpa] | 1.0 | 0.308 | 0.674 | 2e-47 | |
| 224095483 | 474 | predicted protein [Populus trichocarpa] | 1.0 | 0.274 | 0.659 | 2e-47 | |
| 225446392 | 473 | PREDICTED: O-acyltransferase WSD1 [Vitis | 1.0 | 0.274 | 0.610 | 2e-44 | |
| 302143306 | 494 | unnamed protein product [Vitis vinifera] | 1.0 | 0.263 | 0.610 | 3e-44 | |
| 147781339 | 438 | hypothetical protein VITISV_043611 [Viti | 1.0 | 0.296 | 0.603 | 5e-43 | |
| 255553705 | 483 | conserved hypothetical protein [Ricinus | 1.0 | 0.269 | 0.609 | 9e-42 | |
| 357501753 | 471 | O-acyltransferase WSD1 [Medicago truncat | 0.976 | 0.269 | 0.632 | 1e-41 | |
| 224140677 | 473 | predicted protein [Populus trichocarpa] | 1.0 | 0.274 | 0.606 | 4e-41 | |
| 356567032 | 465 | PREDICTED: O-acyltransferase WSD1-like [ | 0.961 | 0.268 | 0.587 | 2e-38 |
| >gi|224140679|ref|XP_002323706.1| predicted protein [Populus trichocarpa] gi|222866708|gb|EEF03839.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/132 (68%), Positives = 111/132 (84%), Gaps = 2/132 (1%)
Query: 1 MSQQFYDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLM 60
MS QFYD+C +YLSK + E++PQSQPLWEVHI+ YPTS+AA ++IFKLHH+LGDGFSLM
Sbjct: 93 MSTQFYDECFDEYLSKTAMEQLPQSQPLWEVHIINYPTSHAASNMIFKLHHSLGDGFSLM 152
Query: 61 GALLSCLQRADDPSRPLTFPSVRMRPDING--SSIFKNVPKFFNTVFNTASDFCWSMIKS 118
GALLSCLQRAD P PLTFPSV + + G SS+F+ VP+FF++V+NTASDFC S IKS
Sbjct: 153 GALLSCLQRADAPPLPLTFPSVHLHTNTYGRNSSMFRKVPRFFSSVYNTASDFCSSFIKS 212
Query: 119 SLIEDDKTPIRS 130
L++DDKTPIRS
Sbjct: 213 CLVKDDKTPIRS 224
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141097|ref|XP_002323911.1| predicted protein [Populus trichocarpa] gi|222866913|gb|EEF04044.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224095483|ref|XP_002310400.1| predicted protein [Populus trichocarpa] gi|222853303|gb|EEE90850.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225446392|ref|XP_002274522.1| PREDICTED: O-acyltransferase WSD1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|302143306|emb|CBI21867.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147781339|emb|CAN62907.1| hypothetical protein VITISV_043611 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255553705|ref|XP_002517893.1| conserved hypothetical protein [Ricinus communis] gi|223542875|gb|EEF44411.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|357501753|ref|XP_003621165.1| O-acyltransferase WSD1 [Medicago truncatula] gi|355496180|gb|AES77383.1| O-acyltransferase WSD1 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224140677|ref|XP_002323705.1| predicted protein [Populus trichocarpa] gi|222866707|gb|EEF03838.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356567032|ref|XP_003551727.1| PREDICTED: O-acyltransferase WSD1-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 130 | ||||||
| TAIR|locus:2154287 | 486 | FOP1 "FOLDED PETAL 1" [Arabido | 0.930 | 0.248 | 0.366 | 1.1e-15 | |
| TAIR|locus:2169175 | 481 | WSD1 [Arabidopsis thaliana (ta | 0.938 | 0.253 | 0.325 | 2.8e-14 | |
| TAIR|locus:2171152 | 482 | AT5G22490 [Arabidopsis thalian | 0.923 | 0.248 | 0.317 | 7.3e-13 | |
| TAIR|locus:2030332 | 479 | AT1G72110 [Arabidopsis thalian | 0.561 | 0.152 | 0.438 | 1.5e-12 | |
| TAIR|locus:505006610 | 480 | AT5G12420 [Arabidopsis thalian | 0.923 | 0.25 | 0.297 | 2e-12 | |
| TAIR|locus:2082921 | 507 | AT3G49200 [Arabidopsis thalian | 0.746 | 0.191 | 0.343 | 2.2e-12 | |
| TAIR|locus:2082936 | 518 | AT3G49210 [Arabidopsis thalian | 0.946 | 0.237 | 0.303 | 2.1e-11 | |
| TAIR|locus:2154282 | 483 | AT5G53380 [Arabidopsis thalian | 0.930 | 0.250 | 0.303 | 2.4e-11 | |
| TAIR|locus:2171372 | 488 | AT5G16350 [Arabidopsis thalian | 0.915 | 0.243 | 0.284 | 6.7e-11 | |
| TAIR|locus:2082906 | 522 | AT3G49190 [Arabidopsis thalian | 0.923 | 0.229 | 0.295 | 7.5e-11 |
| TAIR|locus:2154287 FOP1 "FOLDED PETAL 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 204 (76.9 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 48/131 (36%), Positives = 69/131 (52%)
Query: 7 DKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSC 66
D+ L+DY+SKL+ M S+PLWE+H++ TSNA I K+HH+LGDG SLM LL+C
Sbjct: 100 DQYLEDYISKLTTIPMDLSKPLWEMHLLGVKTSNAESYAILKIHHSLGDGMSLMSLLLAC 159
Query: 67 LQRADDPSR-P-LTFPSVRMRPDINGSSIFKNVPKFF-------NTVFNTASDFCWSMIK 117
++ DP P + R P N S F + F +FNT D +
Sbjct: 160 TRKTSDPEALPTVAVHKKRFGPSCN-SGFFNKIWWLFVGLWFILRLLFNTFVDILMFALT 218
Query: 118 SSLIEDDKTPI 128
++ D +TP+
Sbjct: 219 IFVLRDTETPL 229
|
|
| TAIR|locus:2169175 WSD1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2171152 AT5G22490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2030332 AT1G72110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:505006610 AT5G12420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2082921 AT3G49200 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2082936 AT3G49210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2154282 AT5G53380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2171372 AT5G16350 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2082906 AT3G49190 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 130 | |||
| TIGR02946 | 446 | TIGR02946, acyl_WS_DGAT, acyltransferase, WS/DGAT/ | 3e-11 | |
| pfam03007 | 263 | pfam03007, WES_acyltransf, Wax ester synthase-like | 1e-05 |
| >gnl|CDD|234068 TIGR02946, acyl_WS_DGAT, acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
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Score = 58.9 bits (143), Expect = 3e-11
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 10 LQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGS---VIFKLHHALGDGFSLMGALLSC 66
L + + +L + + +S+PLWE+H++ AG V+ K+HHAL DG + + L
Sbjct: 91 LLELVGRLMSTPLDRSRPLWEMHLI----EGLAGGRFAVLTKVHHALADGVAGLRLLARL 146
Query: 67 LQRADDPSRPLTFPSVRMRP 86
L DP PL P +P
Sbjct: 147 LDDDPDPP-PLPAPPPPPQP 165
|
This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase [Unknown function, Enzymes of unknown specificity]. Length = 446 |
| >gnl|CDD|111851 pfam03007, WES_acyltransf, Wax ester synthase-like Acyl-CoA acyltransferase domain | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 130 | |||
| PF03007 | 263 | WES_acyltransf: Wax ester synthase-like Acyl-CoA a | 99.87 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 99.39 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 98.52 | |
| PF00668 | 301 | Condensation: Condensation domain; InterPro: IPR00 | 97.95 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 97.16 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 96.35 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 96.23 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 95.97 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 95.94 | |
| PRK05691 | 4334 | peptide synthase; Validated | 95.31 | |
| COG4908 | 439 | Uncharacterized protein containing a NRPS condensa | 95.3 | |
| PRK05691 | 4334 | peptide synthase; Validated | 95.3 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 94.86 | |
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 93.39 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 92.27 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 91.6 | |
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 90.34 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 90.01 |
| >PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins | Back alignment and domain information |
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Probab=99.87 E-value=2.4e-21 Score=155.05 Aligned_cols=75 Identities=37% Similarity=0.617 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHhcCCCCCCCcceeeeeeecCCCCCceEEEEEeccccccHHHHHHHHHHhhCCCCCCCCCCCCCC
Q 043679 6 YDKCLQDYLSKLSAEEMPQSQPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCLQRADDPSRPLTFPS 81 (130)
Q Consensus 6 ~d~~L~~~vs~l~~~pld~~rPlWe~~vl~~~~~~~~~a~v~k~HHal~DG~sl~~ll~~~~~~~~dp~~~~~~p~ 81 (130)
++++|++++++++++|||++|||||+|+|+|+.++ ++|+++|+|||++||+++++++.++++..+++...+..+.
T Consensus 93 ~~~~l~~~v~~l~~~pLd~~rPlWe~~li~g~~~g-~~Al~~k~HHal~DG~~~~~l~~~l~~~~~~~~~~~~~~~ 167 (263)
T PF03007_consen 93 DRAELQALVSRLASTPLDRSRPLWEVHLIEGLEGG-RFALVLKVHHALADGVSLMRLLAALLDRSPDPPPPPPPPR 167 (263)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCcEEEEEecCCCC-cEEEEEeehhhhhhhHhHHHHHHHHhCCCCCCCCCCCCcc
Confidence 57899999999999999999999999999999877 7999999999999999999999999999888877655543
|
O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity |
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
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| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
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| >PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics | Back alignment and domain information |
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| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
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| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
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| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
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| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
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| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
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| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
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| >COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] | Back alignment and domain information |
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| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
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| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
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| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
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| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
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| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
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| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
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| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 130 | |||
| 1l5a_A | 436 | Amide synthase, VIBH; nonribosomal peptide synthet | 98.3 | |
| 4hvm_A | 493 | Tlmii; PSI-biology, midwest center for structural | 98.23 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 97.88 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 97.83 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 97.81 | |
| 2xhg_A | 466 | Tyrocidine synthetase A; isomerase, nonribosomal p | 97.64 | |
| 3fot_A | 519 | 15-O-acetyltransferase; fusarium head blight, tric | 95.15 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 93.08 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 90.37 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 90.27 | |
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 90.03 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 88.75 |
| >1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
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Probab=98.30 E-value=1.6e-06 Score=69.79 Aligned_cols=60 Identities=10% Similarity=0.087 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHHhcCCCCCCC-cceeeeeeecCCCCCceEEEEEeccccccHHHHHHHHHHh
Q 043679 5 FYDKCLQDYLSKLSAEEMPQSQ-PLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSC 66 (130)
Q Consensus 5 ~~d~~L~~~vs~l~~~pld~~r-PlWe~~vl~~~~~~~~~a~v~k~HHal~DG~sl~~ll~~~ 66 (130)
+.++++++++.+...+|+|..+ |+|++.++..- +++..+++.+||++.||.|+.-++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~--~~~~~l~~~~HH~i~Dg~S~~~l~~~l 141 (436)
T 1l5a_A 81 EAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLS--HSEHLIYTRAHHIVLDGYGMMLFEQRL 141 (436)
T ss_dssp THHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEEE--TTEEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEEEc--CCEEEEEEeehhheecHhHHHHHHHHH
Confidence 3456799999999999999865 99999999742 236889999999999999987665443
|
| >4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} | Back alignment and structure |
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| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
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| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
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| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
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| >2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} | Back alignment and structure |
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| >3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* | Back alignment and structure |
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| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
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| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
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| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
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| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
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| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 130 | |||
| d1l5aa1 | 174 | VibH {Vibrio cholerae [TaxId: 666]} | 97.99 | |
| d1q9ja1 | 175 | Polyketide synthase associated protein 5, PapA5 {M | 97.56 |
| >d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: VibH species: Vibrio cholerae [TaxId: 666]
Probab=97.99 E-value=1e-05 Score=56.89 Aligned_cols=61 Identities=10% Similarity=0.068 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHHHhcCCCCCC-CcceeeeeeecCCCCCceEEEEEeccccccHHHHHHHHHHhh
Q 043679 5 FYDKCLQDYLSKLSAEEMPQS-QPLWEVHIVKYPTSNAAGSVIFKLHHALGDGFSLMGALLSCL 67 (130)
Q Consensus 5 ~~d~~L~~~vs~l~~~pld~~-rPlWe~~vl~~~~~~~~~a~v~k~HHal~DG~sl~~ll~~~~ 67 (130)
+++++..+.+.+....|+|.. .|++++.++... +++..+++.+||.+.||.|+.-++..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~dl~~~pl~r~~l~~~~--~~~~~l~~~~hHii~Dg~S~~~l~~el~ 142 (174)
T d1l5aa1 81 EAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLS--HSEHLIYTRAHHIVLDGYGMMLFEQRLS 142 (174)
T ss_dssp THHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEEE--TTEEEEEEEEETTTCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCccccCCCcEEEEEEEeC--CCceEEeeecccEEEcHhHHHHHHHHHH
Confidence 346666777788888999975 599999999742 2368899999999999999987766543
|
| >d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
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