Citrus Sinensis ID: 043738
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 368 | 2.2.26 [Sep-21-2011] | |||||||
| P44004 | 200 | Uncharacterized protein H | yes | no | 0.483 | 0.89 | 0.287 | 2e-13 | |
| Q9X0Y1 | 216 | Phosphorylated carbohydra | yes | no | 0.532 | 0.907 | 0.251 | 5e-12 | |
| P77475 | 188 | Fructose-1-phosphate phos | N/A | no | 0.480 | 0.941 | 0.280 | 8e-09 | |
| P54607 | 220 | Uncharacterized protein Y | yes | no | 0.472 | 0.790 | 0.265 | 1e-08 | |
| O06995 | 226 | Beta-phosphoglucomutase O | no | no | 0.543 | 0.884 | 0.261 | 1e-08 | |
| Q88QS2 | 272 | Phosphoglycolate phosphat | yes | no | 0.489 | 0.661 | 0.221 | 5e-08 | |
| P77625 | 216 | Sugar phosphatase YfbT OS | N/A | no | 0.548 | 0.935 | 0.277 | 2e-07 | |
| P31467 | 221 | 6-phosphogluconate phosph | N/A | no | 0.472 | 0.787 | 0.220 | 3e-07 | |
| P44755 | 224 | Phosphoglycolate phosphat | no | no | 0.497 | 0.816 | 0.214 | 6e-07 | |
| P42509 | 251 | Probable phosphoglycolate | no | no | 0.260 | 0.382 | 0.260 | 7e-07 |
| >sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
G IF+ +G +I+ P + QAW + ++ G I+ G E++ +
Sbjct: 12 GLIFDMDGTLIDTMP-VHAQAWTMVGKKFGYEFDFQ-IMYNFGGATVRTIAGEMMKAANM 69
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNIL-----MHYKIPMALVSTHPRKTLE 234
P + R+E++ A + Y+L + + H K P+AL S RK ++
Sbjct: 70 PLD------RIEDVLAAKRELSYQLIPTQSKLLPTFEIVKSFHQKKPIALGSGSHRKIID 123
Query: 235 TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294
+D + I YF AIV+A+DV KP PE F+ A+L++ P RCIVF +++ V+A
Sbjct: 124 MLMDKLAIAPYFNAIVSADDVKEHKPHPETFLRCAELIQANPSRCIVFEDADLGVQAGLS 183
Query: 295 ARMKCVAVASK 305
A M V ++
Sbjct: 184 AGMDVFDVRTR 194
|
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) |
| >sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
IF+ +GV+++ P L +A+ +A+ GK P + RRI G+ + + ++
Sbjct: 3 AVIFDMDGVLMDTEP-LYFEAYRRVAESYGK-PYTEDLHRRIMGVPEREGLPILMEALEI 60
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239
L R+ E + + + + G +E + + +I +AL ++ P++ +
Sbjct: 61 KDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRR 120
Query: 240 IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC 299
+ +E+YF +V + V GKPDPE+++ + L +PE+ +VF +S VEAA A ++
Sbjct: 121 LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIER 180
Query: 300 V-----AVASKHPVYELGAADLV 317
+ ++ + E GA LV
Sbjct: 181 IYGVVHSLNDGKALLEAGAVALV 203
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Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 12/189 (6%)
Query: 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEG-KSPPPAFI-LRRIEGMKNEQAISEVLC 175
+ G IF+ +G I++ P ++AW + G + A I L + QAI E+
Sbjct: 5 YAGLIFDMDGTILDTEPT-HRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQ 63
Query: 176 WSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILM--HYKIPMALVSTHPRKTL 233
DP L R + E + L + L V+++ H + PMA+ +
Sbjct: 64 ADLDPHALAR--EKTEAVRSMLLDSVEPL-----PLVDVVKSWHGRRPMAVGTGSESAIA 116
Query: 234 ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH 293
E + +G+ YF A+VAA+ V KP P+ F+ AQ + P +C+VF +++ ++AA
Sbjct: 117 EALLAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAAR 176
Query: 294 DARMKCVAV 302
A M V V
Sbjct: 177 AAGMDAVDV 185
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Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1 | Back alignment and function description |
|---|
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 18/192 (9%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAF---ILRRIEGMKNEQAISEVLCWSR 178
IF+++G+I+ D E + + +E G P + ++ G + + + E +
Sbjct: 6 IFDFDGLIL-DTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQIGKKL 64
Query: 179 DPAEL-----RRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTL 233
+ EL R A RME + R G + ++N + + L S+ K +
Sbjct: 65 NHEELTQLRRERFAKRMES---------EKARPGVEAYLNAAKDLGLKIGLASSSDYKWV 115
Query: 234 ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH 293
+ IG+ + F I A+DV KP+PE+++ AA+ L P C+ F +S AA
Sbjct: 116 SGHLKQIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAK 175
Query: 294 DARMKCVAVASK 305
A MKCV V +K
Sbjct: 176 RAGMKCVIVPNK 187
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Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM PE=1 SV=1 | Back alignment and function description |
|---|
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS-- 177
IF+ +GVI D + AW +A E+ P + R++G+ E+++ +L +
Sbjct: 3 AVIFDLDGVIT-DTAEYHFLAWKHIA-EQIDIPFDRDMNERLKGISREESLESILIFGGA 60
Query: 178 ---RDPAELRRMASRMEEIYQALQGGIY--RLRTGSKEFVNILMHYKIPMALVSTHPRKT 232
AE + + R YQ L + L G + L + I + L S+ +
Sbjct: 61 ETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSS--RN 118
Query: 233 LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAA 292
+ + I + F AIV + +GKPDP++F+ AA +L P C ++ + A
Sbjct: 119 APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAI 178
Query: 293 HDARMKCVAVASKHPVYELGAADLVVRHLDELSV 326
A M V V P+ ADLVVR +L++
Sbjct: 179 KSAGMFAVGVGQGQPML---GADLVVRQTSDLTL 209
|
Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose. Bacillus subtilis (strain 168) (taxid: 224308) EC: 5 EC: . EC: 4 EC: . EC: 2 EC: . EC: 6 |
| >sp|Q88QS2|GPH_PSEPK Phosphoglycolate phosphatase OS=Pseudomonas putida (strain KT2440) GN=PP_0416 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 5/185 (2%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
+F+ +G +I+ PDL A + E G+ P +R G + + L D A
Sbjct: 17 MFDLDGTLIDSVPDLAA-AVDRMLLELGRPPAGLEAVRHWVGNGAQVLVRRALAGGIDHA 75
Query: 182 ELR-RMASRMEEIYQALQGGIYRLRT---GSKEFVNILMHYKIPMALVSTHPRKTLETAI 237
++ +A + ++ + L G ++ + L + MAL++ P + + +
Sbjct: 76 DVDDALAEQALALFMDAYAESHELTVVYPGVRDTLRWLRKQGVEMALITNKPERFVGPLL 135
Query: 238 DSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
D + I +F I+ + + + KPDP ++ Q+ P++ + G+S V+AA A +
Sbjct: 136 DQMKIGNFFRWIIGGDTLPQKKPDPAALLFVMQMAGVTPQQSLFVGDSRSDVQAAKAAGV 195
Query: 298 KCVAV 302
+CV +
Sbjct: 196 QCVGL 200
|
Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Pseudomonas putida (strain KT2440) (taxid: 160488) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|P77625|YFBT_ECOLI Sugar phosphatase YfbT OS=Escherichia coli (strain K12) GN=yfbT PE=1 SV=2 | Back alignment and function description |
|---|
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 14/216 (6%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV--LCWS 177
G +F+ +G +++ P +E+ AW A+ G +P +L I G +QAI+ +
Sbjct: 5 GFLFDLDGTLVDSLPAVER-AWSNWARRHGLAPEE--VLAFIHG---KQAITSLRHFMAG 58
Query: 178 RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTH--PRKTLET 235
+ A++ +R+E I GI L G+ ++ L IP A+V++ P
Sbjct: 59 KSEADIAAEFTRLEHIEATETEGITAL-PGAIALLSHLNKAGIPWAIVTSGSMPVARARH 117
Query: 236 AIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295
I + E F V AE V RGKP+P+ ++ AQLL P+ C+V ++ V + A
Sbjct: 118 KIAGLPAPEVF---VTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAA 174
Query: 296 RMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKN 331
+AV + L DLV+ L++++V N
Sbjct: 175 GCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPN 210
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Catalyzes the dephosphorylation of different sugar phosphates including ribose-5-phosphate (Ribu5P), fructose-1-phosphate (Fru1P), fructose-6-phosphate (Fru6P), glucose-6-phosphate (Glu6P). Selectively hydrolyzes beta-D-glucose-1-phosphate (bGlu1P) and has no activity with the alpha form. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 EC: 3 |
| >sp|P31467|YIEH_ECOLI 6-phosphogluconate phosphatase OS=Escherichia coli (strain K12) GN=yieH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 85/181 (46%), Gaps = 7/181 (3%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
F+ +G ++ D+ + +A++T+ QE G + P + +R +G+K + E++
Sbjct: 6 AVFFDCDGTLV-DSEVICSRAYVTMFQEFGITLDPEEVFKRFKGVK----LYEIIDIVSL 60
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMH-YKIPMALVSTHPRKTLETAID 238
+ + E +Y+A ++ + E L+ PM +VS P ++ ++
Sbjct: 61 EHGVTLAKTEAEHVYRAEVARLFDSELEAIEGAGALLSAITAPMCVVSNGPNNKMQHSMG 120
Query: 239 SIGIEEYF-TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
+ + YF + + D+ R KPDP + +AA+ + E CI+ +S ++ DA M
Sbjct: 121 KLNMLHYFPDKLFSGYDIQRWKPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGM 180
Query: 298 K 298
+
Sbjct: 181 E 181
|
Catalyzes strongly the dephosphorylation of 6-phosphogluconate (6P-Glu) and slightly the dephosphorylation of dihydroxyacetone phosphate (DHAP) and phosphoenolpyruvate (PEP). Also hydrolyzes both purines (GMP and IMP) and pyrimidines as secondary substrates. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P44755|GPH_HAEIN Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gph PE=3 SV=1 | Back alignment and function description |
|---|
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 8/191 (4%)
Query: 123 FEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA- 181
F+ +G ++ PDL LA+ P +L I G I+ L W++
Sbjct: 10 FDLDGTLVNSLPDLALSVNSALAEFNLPQAPEELVLTWI-GNGAPVLIARALDWAKKQTG 68
Query: 182 ------ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLET 235
E++++ R Y + RL KE + IL +A+V+ P + ++
Sbjct: 69 KVLTETEVKQVTERFNFYYGENLCNVSRLYPNVKETLEILKEKGYVLAVVTNKPTRHVQP 128
Query: 236 AIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295
+ + GI+ F+ ++ + + KP P Y F P + + G+S + A H A
Sbjct: 129 VLAAFGIDHLFSEMLGGQSLPAIKPHPAPLYYLCGKFGFEPRQVLFVGDSKNDIIAGHAA 188
Query: 296 RMKCVAVASKH 306
V + +
Sbjct: 189 GCAVVGLTYGY 199
|
Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
| >sp|P42509|GPH_PSEPU Probable phosphoglycolate phosphatase (Fragment) OS=Pseudomonas putida GN=gph PE=3 SV=1 | Back alignment and function description |
|---|
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%)
Query: 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFV 266
G K+ + L + MAL++ P + + +D + I YF ++ + + + KPDP +
Sbjct: 84 GVKDTLRWLQKQGVEMALITNKPERFVAPLLDQMKIGRYFRWMIGGDTLPQKKPDPAALL 143
Query: 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302
+ Q+ P++ + G+S V AA A ++CV +
Sbjct: 144 FVMQMAGVTPQQSLFVGDSRSDVLAAKAAGVQCVGL 179
|
Specifically catalyzes the dephosphorylation of 2-phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Pseudomonas putida (taxid: 303) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 1 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 368 | ||||||
| 255537465 | 380 | 2-deoxyglucose-6-phosphate phosphatase, | 0.989 | 0.957 | 0.798 | 1e-163 | |
| 224074929 | 381 | predicted protein [Populus trichocarpa] | 1.0 | 0.965 | 0.758 | 1e-161 | |
| 147862982 | 369 | hypothetical protein VITISV_022195 [Viti | 0.923 | 0.921 | 0.808 | 1e-159 | |
| 224053897 | 381 | predicted protein [Populus trichocarpa] | 0.994 | 0.960 | 0.765 | 1e-159 | |
| 225426418 | 369 | PREDICTED: phosphatase YfbT [Vitis vinif | 0.923 | 0.921 | 0.805 | 1e-159 | |
| 449457576 | 377 | PREDICTED: sugar phosphatase YfbT-like [ | 0.989 | 0.965 | 0.745 | 1e-157 | |
| 449533222 | 377 | PREDICTED: LOW QUALITY PROTEIN: sugar ph | 0.989 | 0.965 | 0.742 | 1e-156 | |
| 356513397 | 377 | PREDICTED: phosphatase YfbT-like [Glycin | 0.986 | 0.962 | 0.737 | 1e-152 | |
| 255639949 | 377 | unknown [Glycine max] | 0.986 | 0.962 | 0.732 | 1e-151 | |
| 356528312 | 377 | PREDICTED: phosphatase YfbT-like [Glycin | 0.986 | 0.962 | 0.718 | 1e-148 |
| >gi|255537465|ref|XP_002509799.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223549698|gb|EEF51186.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 297/372 (79%), Positives = 325/372 (87%), Gaps = 8/372 (2%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLGRRIVNYCPPPRM---KLSRSINKSINAL 57
+ PLC+G V+D S K++ CR +EF GR++V P R+ K+ R + SI AL
Sbjct: 13 YRPLCRGFSVKDASCKRRSSGNCRVLGSEFTGRKLVALSP--RLLGWKVDRLVVTSIKAL 70
Query: 58 AMELTKETYSFREEE-KIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGC 116
AMELTKETYSFREEE +IP W YQ DTGVDRKPGLWPPEN+ADN SL+NPLLRQERMGC
Sbjct: 71 AMELTKETYSFREEEERIPRTWGYQADTGVDRKPGLWPPENRADNASLNNPLLRQERMGC 130
Query: 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW 176
GWLGAIFEWEGVIIEDNPDLEKQAWL L++EEGKSPPPAF+LRRIEGMKNEQA+SEVLCW
Sbjct: 131 GWLGAIFEWEGVIIEDNPDLEKQAWLALSEEEGKSPPPAFLLRRIEGMKNEQAMSEVLCW 190
Query: 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETA 236
SRDPAELRRMA+R EEIYQALQGGIYRLR+GSKEFVN+LMHYKIPMAL+ST PRKTLE+A
Sbjct: 191 SRDPAELRRMATRKEEIYQALQGGIYRLRSGSKEFVNVLMHYKIPMALISTRPRKTLESA 250
Query: 237 IDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDAR 296
I SIGIE YF+AIVAAEDVHRGKPDPEMF+YAAQLLKFIPERCIVFGNSNQTVEAAHD R
Sbjct: 251 IGSIGIEGYFSAIVAAEDVHRGKPDPEMFIYAAQLLKFIPERCIVFGNSNQTVEAAHDVR 310
Query: 297 MKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGY 356
MKCVAVASKHPVYEL AADLVVRHLDELSVVDLKNLADIES EFGS+EPEME+EEEE
Sbjct: 311 MKCVAVASKHPVYELSAADLVVRHLDELSVVDLKNLADIESPEFGSLEPEMELEEEEN-- 368
Query: 357 PSSLTTVDDIFW 368
S+ VDDIFW
Sbjct: 369 RSTAVGVDDIFW 380
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224074929|ref|XP_002304495.1| predicted protein [Populus trichocarpa] gi|222841927|gb|EEE79474.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/369 (75%), Positives = 318/369 (86%), Gaps = 1/369 (0%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLGRRIVNYCPP-PRMKLSRSINKSINALAM 59
+ PLC G+ V+D S ++K CR P+ E +G+R+V P PR+K+ R +N SI ALA
Sbjct: 13 YRPLCGGLSVKDTSYRRKSLSSCRCPIKEAVGKRLVYSSPMLPRLKIDRLVNTSIKALAT 72
Query: 60 ELTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWL 119
ELTK+ YS+REEE+IP W Y++DTGVDRKPGLWPPEN+ADN LHNPL+RQERMGC WL
Sbjct: 73 ELTKKVYSYREEERIPRTWNYRVDTGVDRKPGLWPPENRADNALLHNPLIRQERMGCSWL 132
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
GAIFEWEGVIIEDNPDLE+QAWL L++EEGK PPAFILRR++GMKNEQAISEVLCWSRD
Sbjct: 133 GAIFEWEGVIIEDNPDLERQAWLALSREEGKPTPPAFILRRVDGMKNEQAISEVLCWSRD 192
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239
P E++RMA+R EEIYQ+LQGGIYRLRTGSKEFVNILMHYKIPMALVST PRKTLE+AI +
Sbjct: 193 PPEMKRMATRKEEIYQSLQGGIYRLRTGSKEFVNILMHYKIPMALVSTRPRKTLESAIGT 252
Query: 240 IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC 299
+GIE YFTAIVAAEDVHRGKPDPEMF+YAAQLL FIP+RCIVFGNSNQTVEAAHDA MKC
Sbjct: 253 VGIEGYFTAIVAAEDVHRGKPDPEMFIYAAQLLNFIPQRCIVFGNSNQTVEAAHDAFMKC 312
Query: 300 VAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGYPSS 359
VA+ASKHPVYELGAADLVVR LDELS+VDLKNLADIES EFG VE E E+E EE+ S+
Sbjct: 313 VAIASKHPVYELGAADLVVRKLDELSIVDLKNLADIESPEFGPVELETELEPEEDNDRST 372
Query: 360 LTTVDDIFW 368
VDDIFW
Sbjct: 373 SAGVDDIFW 381
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147862982|emb|CAN82996.1| hypothetical protein VITISV_022195 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/344 (80%), Positives = 305/344 (88%), Gaps = 4/344 (1%)
Query: 1 HPPLCQGIPV--RDLSSKKKFPDCCRFPVTEFLGRRIVNYCPPPRMKLSRSINK-SINAL 57
H PLC G+ + +D+S K+K D CRFP+ EFLGRRI PR + + SI AL
Sbjct: 13 HRPLCGGLGLSCKDISYKRKLSDVCRFPLMEFLGRRISASPYLPRRRGGDRLGALSIKAL 72
Query: 58 AMELTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCG 117
AMELTKE +S++EE +IP + RY+IDTG+DRKPGLWPPENKAD+ SLHNPLLRQERMGCG
Sbjct: 73 AMELTKEAHSYKEE-RIPRNLRYRIDTGIDRKPGLWPPENKADSSSLHNPLLRQERMGCG 131
Query: 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS 177
WLGAIFEWEGVIIEDNPDLE QAWL L+QEEGKSPPPAFILRRIEGMKNEQAISEVLCWS
Sbjct: 132 WLGAIFEWEGVIIEDNPDLENQAWLALSQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS 191
Query: 178 RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAI 237
RDPA+LRRMASR E+IYQALQGG++RLRTGS+EFVN+LM+YKIPMALVST PRKTLETAI
Sbjct: 192 RDPAQLRRMASRKEDIYQALQGGMHRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLETAI 251
Query: 238 DSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
+IGIE YF+ IVAAEDV+RGKPDPEMFVYAAQLL FIPERCIVFGNSN TVEAAHDARM
Sbjct: 252 GTIGIESYFSVIVAAEDVYRGKPDPEMFVYAAQLLNFIPERCIVFGNSNLTVEAAHDARM 311
Query: 298 KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFG 341
KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFG
Sbjct: 312 KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFG 355
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224053897|ref|XP_002298034.1| predicted protein [Populus trichocarpa] gi|222845292|gb|EEE82839.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 281/367 (76%), Positives = 313/367 (85%), Gaps = 1/367 (0%)
Query: 3 PLCQGIPVRDLSSKKKFPDCCRFPVTEFLGRRIVNYCPP-PRMKLSRSINKSINALAMEL 61
PL G+ V+D S ++K C PV EF+G+RI+ P PR+K+ +N SI ALA EL
Sbjct: 15 PLSGGLSVKDGSYRRKSLSSCWRPVNEFVGKRILYSSPMLPRLKIDMLVNTSIKALATEL 74
Query: 62 TKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWLGA 121
TKE YSFRE E+IP W Y++DTG DRKPGLWPPEN+ADNPSLHNPL+RQERMGCGWLGA
Sbjct: 75 TKEAYSFRERERIPRTWNYRVDTGADRKPGLWPPENRADNPSLHNPLIRQERMGCGWLGA 134
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
IFEWEGVIIEDNPDLE+QAWL+L+QEEGK PPAFILRR+EGMK+EQAISEVLCWSRDPA
Sbjct: 135 IFEWEGVIIEDNPDLERQAWLSLSQEEGKPAPPAFILRRVEGMKSEQAISEVLCWSRDPA 194
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
E++RMA+R EEIYQ+LQGGIYRLRTGSKEFVNILM +KIPMALVST PRKTLE AI +IG
Sbjct: 195 EMKRMATRREEIYQSLQGGIYRLRTGSKEFVNILMRHKIPMALVSTRPRKTLENAIGTIG 254
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
IE YFT IVAAEDVHRGKPDPEMF+YAAQLL FIP+RCIVFGNSNQ VEAAHDA MKCVA
Sbjct: 255 IEGYFTVIVAAEDVHRGKPDPEMFIYAAQLLNFIPQRCIVFGNSNQAVEAAHDAFMKCVA 314
Query: 302 VASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGYPSSLT 361
VASKHPVYELGAADL VR LDELS+VDLKNLADIES EFG EPE+E+E EE+ S
Sbjct: 315 VASKHPVYELGAADLAVRKLDELSIVDLKNLADIESPEFGPPEPELELELEEDNDRPSTV 374
Query: 362 TVDDIFW 368
VDDIFW
Sbjct: 375 GVDDIFW 381
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426418|ref|XP_002273883.1| PREDICTED: phosphatase YfbT [Vitis vinifera] gi|297742522|emb|CBI34671.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/344 (80%), Positives = 305/344 (88%), Gaps = 4/344 (1%)
Query: 1 HPPLCQGIPV--RDLSSKKKFPDCCRFPVTEFLGRRIVNYCPPPRMKLSRSINK-SINAL 57
H PLC G+ + +D+S K++ D CRFP+ EFLGRRI PR + + SI AL
Sbjct: 13 HRPLCGGLGLSCKDISYKRRLSDVCRFPLMEFLGRRISASPYLPRRRGGDRLGALSIKAL 72
Query: 58 AMELTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCG 117
AMELTKE +S++EE +IP + RY+IDTG+DRKPGLWPPENKAD+ SLHNPLLRQERMGCG
Sbjct: 73 AMELTKEAHSYKEE-RIPRNLRYRIDTGIDRKPGLWPPENKADSSSLHNPLLRQERMGCG 131
Query: 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS 177
WLGAIFEWEGVIIEDNPDLE QAWL L+QEEGKSPPPAFILRRIEGMKNEQAISEVLCWS
Sbjct: 132 WLGAIFEWEGVIIEDNPDLENQAWLALSQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS 191
Query: 178 RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAI 237
RDPA+LRRMASR E+IYQALQGG++RLRTGS+EFVN+LM+YKIPMALVST PRKTLETAI
Sbjct: 192 RDPAQLRRMASRKEDIYQALQGGMHRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLETAI 251
Query: 238 DSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
+IGIE YF+ IVAAEDV+RGKPDPEMFVYAAQLL FIPERCIVFGNSN TVEAAHDARM
Sbjct: 252 GTIGIESYFSVIVAAEDVYRGKPDPEMFVYAAQLLNFIPERCIVFGNSNLTVEAAHDARM 311
Query: 298 KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFG 341
KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFG
Sbjct: 312 KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFG 355
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449457576|ref|XP_004146524.1| PREDICTED: sugar phosphatase YfbT-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/369 (74%), Positives = 312/369 (84%), Gaps = 5/369 (1%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLGRRIVNYCPPPRMKLSRSINKSINALAME 60
H LC G V++ S K+K FP ++F+G+R+++ P +K+ R SI AL++E
Sbjct: 13 HQLLCGGTFVKETSYKRK---NSWFPTSKFVGKRLISSPPVYGLKVDRLAVFSIKALSLE 69
Query: 61 LTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWLG 120
+TKE YSFRE+ +IP DW Y ID+G DRKPGLWPPENKADNPSLHNPLLRQERMGCGWLG
Sbjct: 70 VTKEAYSFRED-RIPKDWNYDIDSGFDRKPGLWPPENKADNPSLHNPLLRQERMGCGWLG 128
Query: 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP 180
AIFEWEGV+IEDNP++EKQAWL L+QEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP
Sbjct: 129 AIFEWEGVLIEDNPEIEKQAWLALSQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP 188
Query: 181 AELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240
++LRRMA+R EEIYQALQGGIYRLR GSKEFVN+LMHYKIPMALVST PR+TLE+A+ I
Sbjct: 189 SQLRRMAARKEEIYQALQGGIYRLRAGSKEFVNVLMHYKIPMALVSTRPRETLESAMGKI 248
Query: 241 GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300
GI+ F I+AAEDVHRGKPDPEMFVYAAQLL FIPERCIVFGNSNQTVEAAHDARMKCV
Sbjct: 249 GIDGDFNVIIAAEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV 308
Query: 301 AVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFG-SVEPEMEVEEEEEGYPSS 359
AVASKHPVYEL AADLVVR LDEL+VVDLKNLADIES+EFG EE++ PS+
Sbjct: 309 AVASKHPVYELAAADLVVRRLDELTVVDLKNLADIESSEFGPGEPELEMEVEEDDESPST 368
Query: 360 LTTVDDIFW 368
+T VDDIFW
Sbjct: 369 ITAVDDIFW 377
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449533222|ref|XP_004173575.1| PREDICTED: LOW QUALITY PROTEIN: sugar phosphatase YfbT-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/369 (74%), Positives = 311/369 (84%), Gaps = 5/369 (1%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLGRRIVNYCPPPRMKLSRSINKSINALAME 60
H LC G V++ S K+K FP ++F+G+R+++ P +K+ R SI AL++E
Sbjct: 13 HQLLCGGTFVKETSYKRK---NSWFPTSKFVGKRLISSPPVYGLKVDRLAVFSIKALSLE 69
Query: 61 LTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWLG 120
+TKE YSFRE+ +IP DW Y ID+G DRKPGLWPPENKADNPSLHNPLLRQERMGCGWLG
Sbjct: 70 VTKEAYSFRED-RIPKDWNYDIDSGFDRKPGLWPPENKADNPSLHNPLLRQERMGCGWLG 128
Query: 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP 180
AIFEWEGV+IEDNP++EKQAWL L+QEEGKSP PAFILRRIEGMKNEQAISEVLCWSRDP
Sbjct: 129 AIFEWEGVLIEDNPEIEKQAWLALSQEEGKSPXPAFILRRIEGMKNEQAISEVLCWSRDP 188
Query: 181 AELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240
++LRRMA+R EEIYQALQGGIYRLR GSKEFVN+LMHYKIPMALVST PR+TLE+A+ I
Sbjct: 189 SQLRRMAARKEEIYQALQGGIYRLRAGSKEFVNVLMHYKIPMALVSTRPRETLESAMGKI 248
Query: 241 GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300
GI+ F I+AAEDVHRGKPDPEMFVYAAQLL FIPERCIVFGNSNQTVEAAHDARMKCV
Sbjct: 249 GIDGDFNVIIAAEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV 308
Query: 301 AVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFG-SVEPEMEVEEEEEGYPSS 359
AVASKHPVYEL AADLVVR LDEL+VVDLKNLADIES+EFG EE++ PS+
Sbjct: 309 AVASKHPVYELAAADLVVRRLDELTVVDLKNLADIESSEFGPGEPELEMEVEEDDESPST 368
Query: 360 LTTVDDIFW 368
+T VDDIFW
Sbjct: 369 ITAVDDIFW 377
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513397|ref|XP_003525400.1| PREDICTED: phosphatase YfbT-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/370 (73%), Positives = 308/370 (83%), Gaps = 7/370 (1%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLG--RRIVNYCPPPRMKLSRSINKSINALA 58
H P+C G RD+S K+K + RFP TEFLG R +V+ P K R + SI ALA
Sbjct: 13 HRPICGGNLTRDVSVKRKSLNTVRFPTTEFLGGGRIVVSLALPKSDKQDRFVFSSIKALA 72
Query: 59 MELTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGW 118
+ELT+E +++REE K+P + +ID G D++P WPP N+AD PSL NPLLR ERMGCGW
Sbjct: 73 VELTREAHAYREE-KLP-NRDTKIDRGFDQRPDSWPPANRADKPSLRNPLLRHERMGCGW 130
Query: 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR 178
LGAIFEWEGV+IEDNPDLEKQAWL L+QEEGK PPAFIL+RIEGMKNEQAISEVLCWSR
Sbjct: 131 LGAIFEWEGVLIEDNPDLEKQAWLALSQEEGKPSPPAFILKRIEGMKNEQAISEVLCWSR 190
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
DPA+LRRMA+R EEIYQ+LQGGIYR +GSKEFV++LMHYKIPMALVST PRK LE+AI
Sbjct: 191 DPAQLRRMANRKEEIYQSLQGGIYRFLSGSKEFVSVLMHYKIPMALVSTRPRKALESAIG 250
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
IGIE+ F+ IVAAEDVHRGKPDPEMFVYAAQLL FIPERCIVFGNSN TVEAAH+ARMK
Sbjct: 251 EIGIEDTFSVIVAAEDVHRGKPDPEMFVYAAQLLNFIPERCIVFGNSNLTVEAAHEARMK 310
Query: 299 CVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGYPS 358
CVAVASKHPVYELGAADLVVR LDELSVVDLKNLADIE TEFGSVEPEME+E E++ Y S
Sbjct: 311 CVAVASKHPVYELGAADLVVRRLDELSVVDLKNLADIEMTEFGSVEPEMELEVEKD-YGS 369
Query: 359 SLTTVDDIFW 368
S +VDD FW
Sbjct: 370 S--SVDDNFW 377
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255639949|gb|ACU20267.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/370 (73%), Positives = 305/370 (82%), Gaps = 7/370 (1%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLG--RRIVNYCPPPRMKLSRSINKSINALA 58
H P+C G RD+S K+K D RFP TEFLG R +V+ P K R + SI ALA
Sbjct: 13 HRPICGGNLTRDVSVKRKSLDTVRFPTTEFLGGGRIVVSLALPKSDKQDRFVFSSIKALA 72
Query: 59 MELTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGW 118
+ELT+E +++REE+ + D +ID G D++P WPP N+AD PSL NPLLR ERMGCGW
Sbjct: 73 VELTREAHAYREEKLLNRD--TKIDRGFDQRPDSWPPANRADKPSLRNPLLRHERMGCGW 130
Query: 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR 178
GAIFEWEGV+IEDNPDLEKQAWL L+QEEGK PPAFIL+RIEGMKNEQAISEVLCWSR
Sbjct: 131 SGAIFEWEGVLIEDNPDLEKQAWLALSQEEGKPSPPAFILKRIEGMKNEQAISEVLCWSR 190
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
DPA+LRRMA+R EEIYQ+LQGGIYR +GSKEFV++LMHYKIPMALVST PRK LE+AI
Sbjct: 191 DPAQLRRMANRKEEIYQSLQGGIYRFLSGSKEFVSVLMHYKIPMALVSTRPRKALESAIG 250
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
IGIE+ F+ IVAAEDVHRGKPDPEMFVYAA LL FIPERCIVFGNSN TVEAAH+ARMK
Sbjct: 251 EIGIEDTFSVIVAAEDVHRGKPDPEMFVYAAHLLNFIPERCIVFGNSNLTVEAAHEARMK 310
Query: 299 CVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGYPS 358
CVAVASKHPVYELGAADLVVR LDELSVVDLKNLADIE TEFGSVEPEME+E E++ Y S
Sbjct: 311 CVAVASKHPVYELGAADLVVRRLDELSVVDLKNLADIEMTEFGSVEPEMELEVEKD-YGS 369
Query: 359 SLTTVDDIFW 368
S +VDD FW
Sbjct: 370 S--SVDDNFW 377
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528312|ref|XP_003532748.1| PREDICTED: phosphatase YfbT-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/370 (71%), Positives = 304/370 (82%), Gaps = 7/370 (1%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLG--RRIVNYCPPPRMKLSRSINKSINALA 58
H P+C G RD+S+K+K + RFP TEFLG R +V+ P K R + SI ALA
Sbjct: 13 HRPICGGSLTRDVSAKRKSLNTVRFPTTEFLGGGRIVVSLALPKSDKQDRFVFSSIKALA 72
Query: 59 MELTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGW 118
+ELT+E +++RE+ K+P + +ID G D++P LWPP N+AD SL NPLLR ERMGCGW
Sbjct: 73 VELTREAHAYREK-KLP-NRDNKIDRGFDQRPDLWPPANRADKLSLRNPLLRHERMGCGW 130
Query: 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR 178
LGAIFEWEGV+IEDNPDLEKQAWL L+QEEGK PPAFIL+RIEGMKNEQAISEVLCWSR
Sbjct: 131 LGAIFEWEGVLIEDNPDLEKQAWLALSQEEGKPSPPAFILKRIEGMKNEQAISEVLCWSR 190
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
DPA+LRRMA+R EEIYQAL GGIY +GSKEFV++LMHYKIPMALVST PRK LE+A+
Sbjct: 191 DPAQLRRMANRKEEIYQALLGGIYSFLSGSKEFVSVLMHYKIPMALVSTRPRKALESAMG 250
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
IGIE+ F+ IVAAEDVHRGKPDPEMFVYAAQLL FIPER IVFGNSN TVEAAH+ARMK
Sbjct: 251 EIGIEDTFSVIVAAEDVHRGKPDPEMFVYAAQLLNFIPERVIVFGNSNLTVEAAHEARMK 310
Query: 299 CVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGYPS 358
CVAVAS+HPVYELGAADLVVR LDELSVVDLKNLADIE TEFGSVEPEME+E E++ S
Sbjct: 311 CVAVASRHPVYELGAADLVVRRLDELSVVDLKNLADIEMTEFGSVEPEMELEVEKDHDTS 370
Query: 359 SLTTVDDIFW 368
SL D+ FW
Sbjct: 371 SL---DENFW 377
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 368 | ||||||
| TAIR|locus:2123141 | 373 | AT4G11570 [Arabidopsis thalian | 0.975 | 0.962 | 0.650 | 9.9e-126 | |
| TAIR|locus:2085507 | 365 | AT3G10970 [Arabidopsis thalian | 0.652 | 0.657 | 0.296 | 1.2e-24 | |
| TIGR_CMR|DET_0395 | 456 | DET_0395 "glycoprotease family | 0.559 | 0.451 | 0.322 | 6.3e-23 | |
| UNIPROTKB|P77625 | 216 | yfbT "sugar phosphatase" [Esch | 0.554 | 0.944 | 0.266 | 7.5e-13 | |
| UNIPROTKB|P77475 | 188 | yqaB [Escherichia coli K-12 (t | 0.480 | 0.941 | 0.280 | 7.3e-11 | |
| UNIPROTKB|O06995 | 226 | yvdM "Beta-phosphoglucomutase" | 0.538 | 0.876 | 0.273 | 3.6e-09 | |
| TIGR_CMR|GSU_1839 | 228 | GSU_1839 "hydrolase, haloacid | 0.576 | 0.929 | 0.247 | 1.9e-08 | |
| TAIR|locus:2119647 | 379 | FMN/FHY "riboflavin kinase/FMN | 0.383 | 0.372 | 0.312 | 7.5e-08 | |
| TIGR_CMR|APH_0187 | 207 | APH_0187 "HAD-superfamily hydr | 0.25 | 0.444 | 0.326 | 1.2e-07 | |
| UNIPROTKB|Q9KLE8 | 226 | VC_A0798 "CbbY family protein" | 0.546 | 0.889 | 0.218 | 1.4e-07 |
| TAIR|locus:2123141 AT4G11570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 238/366 (65%), Positives = 285/366 (77%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPV-TEFLGRRIVNYCPPPRMKLSRSINKSINALAM 59
H P I V++ +K RFPV ++ + ++++ +K +R I ALAM
Sbjct: 13 HRPSIVRITVKNELKTQKSQSIVRFPVKVDYSAKGVLSHLMTQSVKKNRMSVFPIRALAM 72
Query: 60 ELTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWL 119
ELTKE ++++++P W Y +D+G D KP LWPPENKAD PSLHNPLLRQERMGCGWL
Sbjct: 73 ELTKEK---KKDDRLPKTWNY-LDSGADDKPSLWPPENKADKPSLHNPLLRQERMGCGWL 128
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
GAIFEWEGV+IEDNPDL+ Q+WLTLAQEEGKSPPPAF+LRR+EGMKNEQAISEVLCWSRD
Sbjct: 129 GAIFEWEGVLIEDNPDLDNQSWLTLAQEEGKSPPPAFMLRRVEGMKNEQAISEVLCWSRD 188
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239
P ++RRMA R EEI++AL GG+YRLR GS+EFVN+LM+ KIPMALVST PR+TLE A+ S
Sbjct: 189 PVQVRRMAKRKEEIFKALHGGVYRLRDGSQEFVNVLMNNKIPMALVSTRPRETLENAVGS 248
Query: 240 IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC 299
IGI ++F+ IVA+EDV+RGKPDPEMF+YAAQLL FIPERCIVFGNSNQT+EAAHD RMKC
Sbjct: 249 IGIRKFFSVIVASEDVYRGKPDPEMFIYAAQLLDFIPERCIVFGNSNQTIEAAHDGRMKC 308
Query: 300 VAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSXXXXXXXXXXXXGYPSS 359
VAVASKHP+YELGAA+LVVR LDELS++DLK LAD + TEF PSS
Sbjct: 309 VAVASKHPIYELGAAELVVRRLDELSIIDLKKLADTDLTEFEPELEMEKEDEREL--PSS 366
Query: 360 LTTVDD 365
VDD
Sbjct: 367 AVAVDD 372
|
|
| TAIR|locus:2085507 AT3G10970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 74/250 (29%), Positives = 123/250 (49%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKN-EQAISEVLCWSR 178
G IF W+ V+ D L+ +AW LA EEGK ++R+ + + +VL W +
Sbjct: 124 GLIFSWDNVVA-DTRSLKLEAWKQLAAEEGKEITEEVDIQRLMLYAGADHVLRKVLFWEK 182
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
+++ R+ R+ EIY + + G +++++ + +IP A+VS RK + A++
Sbjct: 183 TQSKIDRLKLRLSEIYYDSLLKLTEPKEGLRDWLDAVTTARIPCAVVSNLDRKNMINALE 242
Query: 239 SIGIEEYFTAIVAAEDVHRGKPD-PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
+G+++YF A+V+ ED G F+ AA L P +C+VF + + + AAH+ M
Sbjct: 243 RMGLQKYFQAVVSEED---GMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCTM 299
Query: 298 KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSXXXXXXXXXXXXGYP 357
V + H Y+L ADL V + ELSV++L+ L GS P
Sbjct: 300 MAVGLIGAHRAYDLVQADLAVGNFYELSVINLRRLF----ANKGSTFMDHEKQIIEKSPP 355
Query: 358 SSLTTVDDIF 367
T+D IF
Sbjct: 356 KRKLTIDTIF 365
|
|
| TIGR_CMR|DET_0395 DET_0395 "glycoprotease family protein/hydrolase, beta-phosphoglucomutase family" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 269 (99.8 bits), Expect = 6.3e-23, P = 6.3e-23
Identities = 67/208 (32%), Positives = 108/208 (51%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
I++ +GVI + P +AW T E G + A R G++N+ I VL D
Sbjct: 241 IWDMDGVIADSAP-FHMRAWQTTFAEIGYTFSEADFYRTF-GLRNDMIIYSVLGEKSDAD 298
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
+ +A R E +++ G +L G E + L MA+ S+ P ++ + +G
Sbjct: 299 TIHTLADRKEHLFREYAGQEIQLFPGVIELLKSLKTAGYRMAIASSAPLANIKLVMTKLG 358
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
I +YF A V+ +DV +GKP+P++F+ +A L PE C+V ++ VEAA A MKC+A
Sbjct: 359 IGDYFLATVSEKDVTKGKPNPQIFLLSAARLCASPEECLVIEDAPAGVEAAKKAGMKCIA 418
Query: 302 VASKHPVYELGAADLVVRHLDELSVVDL 329
V + L AD++V L ++SV D+
Sbjct: 419 VTNSQQPQALSEADMIVDTLGKISVEDI 446
|
|
| UNIPROTKB|P77625 yfbT "sugar phosphatase" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 175 (66.7 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 57/214 (26%), Positives = 100/214 (46%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
G +F+ +G +++ P +E+ AW A+ G +P +L I G + ++ + +
Sbjct: 5 GFLFDLDGTLVDSLPAVER-AWSNWARRHGLAPEE--VLAFIHGKQAITSLRHFMA-GKS 60
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTH--PRKTLETAI 237
A++ +R+E I GI L G+ ++ L IP A+V++ P I
Sbjct: 61 EADIAAEFTRLEHIEATETEGITAL-PGAIALLSHLNKAGIPWAIVTSGSMPVARARHKI 119
Query: 238 DSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
+ E F V AE V RGKP+P+ ++ AQLL P+ C+V ++ V + A
Sbjct: 120 AGLPAPEVF---VTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGC 176
Query: 298 KCVAVASKHPVYELGAADLVVRHLDELSVVDLKN 331
+AV + L DLV+ L++++V N
Sbjct: 177 HVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPN 210
|
|
| UNIPROTKB|P77475 yqaB [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 157 (60.3 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEG-KSPPPAFI-LRRIEGMKNEQAISEVLC 175
+ G IF+ +G I++ P ++AW + G + A I L + QAI E+
Sbjct: 5 YAGLIFDMDGTILDTEPT-HRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQ 63
Query: 176 WSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILM--HYKIPMALVSTHPRKTL 233
DP L R + E + L + L V+++ H + PMA+ +
Sbjct: 64 ADLDPHALAR--EKTEAVRSMLLDSVEPL-----PLVDVVKSWHGRRPMAVGTGSESAIA 116
Query: 234 ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH 293
E + +G+ YF A+VAA+ V KP P+ F+ AQ + P +C+VF +++ ++AA
Sbjct: 117 EALLAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAAR 176
Query: 294 DARMKCVAV 302
A M V V
Sbjct: 177 AAGMDAVDV 185
|
|
| UNIPROTKB|O06995 yvdM "Beta-phosphoglucomutase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)] | Back alignment and assigned GO terms |
|---|
Score = 153 (58.9 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 58/212 (27%), Positives = 96/212 (45%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP- 180
IF+ +GVI D + AW +A E+ P + R++G+ E+++ +L +
Sbjct: 5 IFDLDGVIT-DTAEYHFLAWKHIA-EQIDIPFDRDMNERLKGISREESLESILIFGGAET 62
Query: 181 ----AELRRMASRMEEIYQALQGGIYR--LRTGSKEFVNILMHYKIPMALVSTHPRKTLE 234
AE + + R YQ L + L G + L + I + L S+ +
Sbjct: 63 KYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSS--RNAP 120
Query: 235 TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294
+ + I + F AIV + +GKPDP++F+ AA +L P C ++ + A
Sbjct: 121 KILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKS 180
Query: 295 ARMKCVAVASKHPVYELGAADLVVRHLDELSV 326
A M V V P+ LGA DLVVR +L++
Sbjct: 181 AGMFAVGVGQGQPM--LGA-DLVVRQTSDLTL 209
|
|
| TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 148 (57.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 56/226 (24%), Positives = 99/226 (43%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISE---VLCWSR 178
IF+++G+I++ P L +A+ + + G + G + A E V
Sbjct: 6 IFDFDGIIVDTEP-LHYRAFQAILEPIGFGYSWEAYVDVYMGYDDRDAFREAFRVRGADL 64
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFV-NILMHYKIPMALVSTHPRKTLETAI 237
+ EL + +R +Q + G E + NI ++ P+AL S R + +
Sbjct: 65 EDRELEGLIARKAAAFQEIIASGVTPYPGVVELIRNIKANH--PVALCSGALRSDILPIL 122
Query: 238 DSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL-------KFIPERCIVFGNSNQTVE 290
+ +G+ F +V A++V KPDP + A + L + PE CI ++ +
Sbjct: 123 EGLGLSGIFDVMVTADEVSASKPDPASYALAVRRLTAAFPNRQIRPETCIAIEDTPAGIA 182
Query: 291 AAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIE 336
+A A + +AV + +P LG A VV L ++ + DL LA E
Sbjct: 183 SATGAGIGVLAVTNSYPAVRLGGARRVVDSLADVGLADLAALAGQE 228
|
|
| TAIR|locus:2119647 FMN/FHY "riboflavin kinase/FMN hydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 45/144 (31%), Positives = 71/144 (49%)
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID- 238
P ++ S ++ A I L G+ + L + +P+AL S R +E+ I
Sbjct: 71 PCKVDEFNSEFYPLFSAQMDKIKSL-PGANRLIRHLKCHGVPVALASNSSRANIESKISY 129
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
G +E F+ IV +++V +GKP P++F+ AA+ LK P C+V +S V A A K
Sbjct: 130 HEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMAGKAAGTK 189
Query: 299 CVAVASKHPVYEL-GAADLVVRHL 321
+AV S L +AD V+ L
Sbjct: 190 VIAVPSLPKQTHLYTSADEVINSL 213
|
|
| TIGR_CMR|APH_0187 APH_0187 "HAD-superfamily hydrolase, subfamily IA, variant 1" [Anaplasma phagocytophilum HZ (taxid:212042)] | Back alignment and assigned GO terms |
|---|
Score = 139 (54.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 210 EFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAA 269
E + L H+KI M +VS L + ++G+ +YF+ I+ + D KP PE A
Sbjct: 88 ELLEFLSHHKINMGIVSNKRGPNLRNEVQNLGLGKYFSVILGSGDTAENKPSPEPIFAAL 147
Query: 270 QLLKFIP-ERCIVFGNSNQTVEAAHDARMKCVAVA 303
++ P ER G+S+ +E+A AR CV +A
Sbjct: 148 DIMGIAPSERVFFVGDSDSDIESAKRAR--CVPIA 180
|
|
| UNIPROTKB|Q9KLE8 VC_A0798 "CbbY family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 141 (54.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/215 (21%), Positives = 100/215 (46%)
Query: 109 LRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQ 168
+ + R+ C IF+ EG ++ D+ L +A + + E G + + G K
Sbjct: 1 MTESRVKC----VIFDCEGTLV-DSERLCCEALVQVFGELGVALSYQQVAEHFSGGK--- 52
Query: 169 AISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRT----GSKEFVNILMHYKIPMAL 224
I+++L + A++ +E+ Y+++ +R + G++ +N L +I +
Sbjct: 53 -IADILHAACQLAKITADIDLLEQRYRSIVAATFRRKLSPMGGARALLNYLKRNQIEFCV 111
Query: 225 VSTHPRKTLETAIDSIGIEEYFTA-IVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFG 283
S PR+ + + G+E YF I +A D + KP+P++ Y A + F + CI
Sbjct: 112 ASNAPREKIAMTLTLAGLEHYFEGRIFSAFDANSWKPEPDLIRYCAMNMGFTLDECIYVD 171
Query: 284 NSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV 318
++ + VEA +A + ++ +P + + ++V
Sbjct: 172 DTPKGVEAGLNAEVLTFQLSPLNPQHRSHSQQVIV 206
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 368 | |||
| PLN02575 | 381 | PLN02575, PLN02575, haloacid dehalogenase-like hyd | 0.0 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 1e-137 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 3e-32 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 4e-25 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 8e-21 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 6e-19 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 9e-17 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 4e-15 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 6e-15 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 4e-14 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 6e-14 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 1e-13 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 4e-12 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 3e-11 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 4e-10 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 5e-10 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 1e-09 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 2e-08 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 5e-08 | |
| PRK11587 | 218 | PRK11587, PRK11587, putative phosphatase; Provisio | 6e-08 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 3e-07 | |
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 3e-07 | |
| TIGR03351 | 220 | TIGR03351, PhnX-like, phosphonatase-like hydrolase | 4e-07 | |
| TIGR02252 | 203 | TIGR02252, DREG-2, REG-2-like, HAD superfamily (su | 1e-06 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 2e-06 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 2e-06 | |
| PLN02770 | 248 | PLN02770, PLN02770, haloacid dehalogenase-like hyd | 7e-06 | |
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 5e-05 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 7e-05 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 2e-04 | |
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 3e-04 | |
| TIGR02254 | 224 | TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I | 0.002 | |
| TIGR01428 | 198 | TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalo | 0.003 |
| >gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 693 bits (1791), Expect = 0.0
Identities = 293/369 (79%), Positives = 321/369 (86%), Gaps = 1/369 (0%)
Query: 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLGRRIVNYCP-PPRMKLSRSINKSINALAM 59
H PLC + V+D S ++K CRFPV EF+GRR+V P R+K R + SI ALAM
Sbjct: 13 HRPLCGRLSVKDESYRRKSQSSCRFPVKEFVGRRLVASSPMLQRVKKDRLVVTSIKALAM 72
Query: 60 ELTKETYSFREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWL 119
ELTKE YS+REEE+IP W Y++DTG DRKPGLWPPEN+ADNPSLHNPLLRQERMGCGWL
Sbjct: 73 ELTKEAYSYREEERIPRTWNYRLDTGADRKPGLWPPENRADNPSLHNPLLRQERMGCGWL 132
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
GAIFEWEGVIIEDNPDLE QAWLTLAQEEGKSPPPAFILRR+EGMKNEQAISEVLCWSRD
Sbjct: 133 GAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRD 192
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239
PAELRRMA+R EEIYQALQGGIYRLRTGS+EFVN+LM+YKIPMALVST PRKTLE AI S
Sbjct: 193 PAELRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS 252
Query: 240 IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC 299
IGI +F+ IVAAEDV+RGKPDPEMF+YAAQLL FIPERCIVFGNSNQTVEAAHDARMKC
Sbjct: 253 IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKC 312
Query: 300 VAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGYPSS 359
VAVASKHP+YELGAADLVVR LDELS+VDLKNLADIES EFG EPE+E+E+EE+ S
Sbjct: 313 VAVASKHPIYELGAADLVVRRLDELSIVDLKNLADIESPEFGPPEPELEMEKEEDRELPS 372
Query: 360 LTTVDDIFW 368
VDDIFW
Sbjct: 373 SAGVDDIFW 381
|
Length = 381 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 390 bits (1002), Expect = e-137
Identities = 172/260 (66%), Positives = 219/260 (84%)
Query: 95 PENKADNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPP 154
P ++AD+ SL+NPLLRQ R+GCGWLG + EWEGVI+ED+ +LE++AW LA+EEGK PPP
Sbjct: 1 PRDRADDLSLNNPLLRQHRLGCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPP 60
Query: 155 AFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNI 214
AF+L+R EGMKNEQAISEVLCWSRD +++R+A R E++Y+ +QGG+YRLR GS+EFV
Sbjct: 61 AFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDLYEYMQGGLYRLRPGSREFVQA 120
Query: 215 LMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274
L ++IP+A+ ST PR+ LE AI+++G+E +F+ ++AAEDV+RGKPDPEMF+YAA+ L F
Sbjct: 121 LKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGF 180
Query: 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLAD 334
IPERCIVFGNSN +VEAAHD MKCVAVA KHPVYEL A DLVVR LD+LSVVDLKNL+D
Sbjct: 181 IPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSD 240
Query: 335 IESTEFGSVEPEMEVEEEEE 354
++S EF EP++E E EEE
Sbjct: 241 LDSPEFQIPEPQLEEEVEEE 260
|
Length = 260 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 3e-32
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLC--WS 177
IF+ +G +++ P L +AWL +E G I G + I +
Sbjct: 4 AVIFDMDGTLVDSEP-LHARAWLEALKEYGIEISDEEIRELH-GGGIARIIDLLRKLAAG 61
Query: 178 RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAI 237
DPA+L + + E G+ + G E + L IP+A+ S+ PR+ E +
Sbjct: 62 EDPADLAELERLLYEAEALELEGL-KPIPGVVELLEQLKARGIPLAVASSSPRRAAERVL 120
Query: 238 DSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
+G+ +YF IV A+DV RGKP P++++ AA+ L PE C+V +S ++AA A M
Sbjct: 121 ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGM 180
Query: 298 KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332
+ V V + H L D L + +L L
Sbjct: 181 RVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPAL 215
|
Length = 221 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 4e-25
Identities = 62/196 (31%), Positives = 90/196 (45%), Gaps = 26/196 (13%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAF---ILRRIEGMKNE---QAISEV 173
IF+ +GVI D L QAW +A + G S F ++G+ E +AI ++
Sbjct: 3 AVIFDMDGVIT-DTAPLHAQAWKHIAAKYGIS----FDKQYNESLKGLSREDILRAILKL 57
Query: 174 LCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKE-------FVNILMHYKIPMALVS 226
E+ ++A R E+Y+ L LR + L I + L S
Sbjct: 58 RGDGLSLEEIHQLAERKNELYREL------LRLTGVAVLPGIRNLLKRLKAKGIAVGLGS 111
Query: 227 THPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN 286
+ K + +G+ +YF AIV A +V GKP PE F+ AA+LL P CIVF ++
Sbjct: 112 S--SKNAPRILAKLGLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPNECIVFEDAL 169
Query: 287 QTVEAAHDARMKCVAV 302
V+AA A M VAV
Sbjct: 170 AGVQAARAAGMFAVAV 185
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 8e-21
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS---R 178
+F+ +G +++ D+ +A+ E G P +R++ G+ ++ I +L +
Sbjct: 8 LFDLDGTLVDSAEDIL-RAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEA 66
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
+ R+ Y L RL G KE + L + +V+ P + L+ +
Sbjct: 67 AAELVERLREEFLTAYAELLES--RLFPGVKELLAALKSAGYKLGIVTNKPERELDILLK 124
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
++G+ +YF IV +DV KPDPE + + L PE ++ G+S + AA A +
Sbjct: 125 ALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVP 184
Query: 299 CVAVASKHPVYELGA---ADLVVRHLDEL 324
V V + E A AD+V+ L EL
Sbjct: 185 AVGVTWGYNSREELAQAGADVVIDSLAEL 213
|
Length = 220 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 6e-19
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 11/189 (5%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAF--ILRRIEGMKNEQAISEVLCWS 177
IF+ +GVI D + AW LA E G F L+ + ++ + I ++
Sbjct: 1 AVIFDLDGVIT-DTAEYHYLAWKHLADELGIPFDEEFNESLKGVSREESLERILDLGGKK 59
Query: 178 RDPAELRRMASRMEEIYQALQGGIYR--LRTGSKEFVNILM--HYKIPMALVSTHPRKTL 233
E +A R + Y L + + G K + L + KI +A S + L
Sbjct: 60 YSEEEKEELAERKNDYYVELLKELTPADVLPGIKSLLADLKKNNIKIALASASKNAPTIL 119
Query: 234 ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH 293
E + + +YF AIV ++ +GKPDPE+F+ AA+ L P CI ++ +EA
Sbjct: 120 E----KLELIDYFDAIVDPAELKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIK 175
Query: 294 DARMKCVAV 302
A M V V
Sbjct: 176 AAGMFAVGV 184
|
This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 77.0 bits (190), Expect = 9e-17
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 8/182 (4%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVL-CWSRDP 180
IF+ +G +I+ +P + + A+ G + G+ ++A++++L DP
Sbjct: 2 IFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAG-GLPFDEALADLLREHPIDP 60
Query: 181 AELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240
E+ E + L + + ++S R+ +E ++ +
Sbjct: 61 DEILEALLEYNLE------SRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKL 114
Query: 241 GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300
G+ + F A+ ++DV KPDPE + + L PE + +S + +EAA A +K V
Sbjct: 115 GLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174
Query: 301 AV 302
V
Sbjct: 175 HV 176
|
Length = 176 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 4e-15
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 217 HYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276
H + PMA+ + E + +G+ YF A+VAA+DV KP P+ F+ AQL+ P
Sbjct: 100 HGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQP 159
Query: 277 ERCIVFGNSNQTVEAAHDARMKCVAV 302
+C+VF +++ ++AA A M V V
Sbjct: 160 TQCVVFEDADFGIQAARAAGMDAVDV 185
|
Length = 188 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 6e-15
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAID-SIGIEEYFTAIVAAEDVHRGKPDPEMF 265
G+ + L + +PMAL S PR +E I G +E F+ IV ++V +GKP P++F
Sbjct: 97 GANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIF 156
Query: 266 VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPVYELGAADLVVRHLDEL 324
+ AA+ L P C+V +S V A A M+ +AV S + +AD V+ L +L
Sbjct: 157 LEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216
|
Length = 382 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 70.6 bits (174), Expect = 4e-14
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 170 ISEVLCWSR---DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVS 226
+ L W+ D L ++ + Y G RL G KE + L P+A+V+
Sbjct: 57 VERALTWAGREPDEELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVT 116
Query: 227 THPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN 286
P + ++++GI +YF+ ++ + + KPDP + A + L PE + G+S
Sbjct: 117 NKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSR 176
Query: 287 QTVEAAHDARMKCVAV----ASKHPVYELGAADLVVRHLDEL 324
++AA A V V P+ D+V+ H EL
Sbjct: 177 NDIQAARAAGCPSVGVTYGYNYGEPIALSE-PDVVIDHFAEL 217
|
Length = 226 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 69.0 bits (169), Expect = 6e-14
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 14/185 (7%)
Query: 122 IFEWEGVIIEDNPDLEKQAWL----TLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS 177
+F+ +GV+++ + K + E G S + L + K +
Sbjct: 3 LFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELA-LRRWKAK-------YGR 54
Query: 178 RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAI 237
AE ++ + Y+AL+ + G + + L +AL++ PR + +
Sbjct: 55 TMSAEDAQLL-YKQLFYEALEKEGLKPLPGVRALLEALRARGKKLALLTNSPRADAKLVL 113
Query: 238 DSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
+ +G+ F ++ + DV GKPDP++++ A + L P C+ +S ++AA A M
Sbjct: 114 E-LGLRALFDVVIDSSDVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGM 172
Query: 298 KCVAV 302
V V
Sbjct: 173 HTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 1e-13
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
D + + + + ++ + L+ + K + +++ R E +
Sbjct: 83 DAELVEELLAALAKLLPDYPEALEALK---------ELGKKYKLGILTNGARPHQERKLR 133
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARM 297
+G+ +YF A+ +EDV KPDPE+F YA + L PE + G+S + + A M
Sbjct: 134 QLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGM 193
Query: 298 KCVAVASKH--PVYELGAADLVVRHLDEL 324
K V + L A D + L EL
Sbjct: 194 KTVWINRGGKPLPDALEAPDYEISSLAEL 222
|
Length = 229 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 4e-12
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 16/186 (8%)
Query: 122 IFEWEGVIIEDNPDL-EKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP 180
+F+ +G + + P + E +A L A G + E+ + +L +
Sbjct: 5 VFDLDGTLTDGEPVVPEAEALLEAAAALGV-AIVIAAGENLTKEGREELVRRLLLRALAG 63
Query: 181 AELRRMASR--------MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKT 232
EL R ++ + L L G++E + L I +A+++ R T
Sbjct: 64 EELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLT 123
Query: 233 LETAIDSIGIEEYFTAIVAAEDVH---RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTV 289
+G+ F A+V+A+ GKPDP++F A + L PE ++ G+ +
Sbjct: 124 ANAIARLLGL---FDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDI 180
Query: 290 EAAHDA 295
AA A
Sbjct: 181 PAAKAA 186
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 3e-11
Identities = 42/213 (19%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQA---ISEVLCWS- 177
+F+ +G +++ PD+ + LA P L R+ G + VL W+
Sbjct: 2 LFDLDGTLVDSAPDIAAAVNMALAALGL----PPATLARVIGFIGNGVPVLMERVLAWAG 57
Query: 178 --RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLET 235
D + + + Y+ + G + + G + + L + + LV+ P
Sbjct: 58 QEPDAQRVAELRKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARP 117
Query: 236 AIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295
++ +G+ +YF+ ++ + + + KP P+ + AA+ L P++ + G+S ++AA A
Sbjct: 118 LLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAA 177
Query: 296 RMKCVAV----ASKHPVYELGAADLVVRHLDEL 324
V + + L D++ L+EL
Sbjct: 178 GCPSVLLTYGYRYGEAIDLLP-PDVLYDSLNEL 209
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 4e-10
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 220 IPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV----------------HRGKPDPE 263
I +AL + R+ + ++ +G+++YF ++ + GKP+P+
Sbjct: 41 IKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100
Query: 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302
+ A +LL PE ++ G+S +E A A VAV
Sbjct: 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 5e-10
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPVYELGAA 314
GKP+P M A + L PE C++ G+S+ + AA A ++ + V + +L A
Sbjct: 1 VCGKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERA 60
Query: 315 ----DLVVRHLDEL 324
D VV L +L
Sbjct: 61 PGRPDYVVDSLADL 74
|
Length = 74 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
D +++ M + E + E + L + +V+T R T+E +
Sbjct: 58 DESKVEEMITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLK 117
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
G++E+F ++ +DV KPDPE + A +LL PE ++ G+++ + A +A K
Sbjct: 118 LTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTK 177
Query: 299 CVAVA 303
VA
Sbjct: 178 TAGVA 182
|
Length = 214 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 2e-08
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 224 LVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFG 283
L S P LE + + +YF A+ +AE + KP PE+++ A L P C+
Sbjct: 113 LASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVALE 172
Query: 284 NSNQTVEAAHDARMKCVAVASKHPVYE--LGAADLVVRHLDELSVVDL 329
+S + AA ARM+ + V + + AD+ + L EL+ DL
Sbjct: 173 DSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAADL 220
|
Length = 222 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 5e-08
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 246 FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305
F AIV+A+ KP P++F+ AA++L C+V ++ V+AA A M+C+AV +
Sbjct: 205 FDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTT 264
Query: 306 HPVYELGAAD--LVVRHLDELSVVDLKNLADI 335
L A L+ + + +S+ D+
Sbjct: 265 LSEEILKDAGPSLIRKDIGNISLSDILTGGSD 296
|
Length = 1057 |
| >gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 6e-08
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV 173
M C G +F+ +G +++ P +E+ AW A G +P +L I G +QAI+ +
Sbjct: 1 MRC--KGFLFDLDGTLVDSLPAVER-AWSNWADRHGIAP--DEVLNFIHG---KQAITSL 52
Query: 174 --LCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVS--THP 229
AE++ +R+E+I GI L G+ +N L IP A+V+ + P
Sbjct: 53 RHFMAGASEAEIQAEFTRLEQIEATDTEGITAL-PGAIALLNHLNKLGIPWAIVTSGSVP 111
Query: 230 RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTV 289
+ + E F V AE V RGKP+P+ ++ AQLL P+ C+V ++ V
Sbjct: 112 VASARHKAAGLPAPEVF---VTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGV 168
Query: 290 EAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSV 326
+ A +AV + L DLV+ L++L+V
Sbjct: 169 LSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLTV 205
|
Length = 218 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 32/176 (18%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
+F+ +G ++ D ++A+ +E G +P + +K + ++E L W
Sbjct: 3 LFDIDGTLV-DIKFAIRRAFAQTFEEFGLNPAA------FKRLKALRGLAEELLWRIATE 55
Query: 182 ELRRMASRME-EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240
L + + + +A G + + L I + ++S + + +
Sbjct: 56 ALEELQGHIGYDAEEAYIPGA-------ADLLPRLKEAGIKLGIISNGSLRAQKLLLRKH 108
Query: 241 GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDAR 296
G+ +YF I+ ++++ KP+PE+F+ A + L +P + G++ ++ A +A
Sbjct: 109 GLGDYFELILGSDEIGS-KPEPEIFLAALESLG-VPPEVLHVGDNLSDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 3e-07
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSP---PPAF--ILRRIEGMK-------NEQA 169
+F+ +GV++E D + A+ +E G P L I G K NE
Sbjct: 44 LFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENG 103
Query: 170 --ISEVLCWSRDPAELRRMASRME----EIYQAL-QGGIYRLRTGSKEFVNILMHYKIPM 222
S + +D E + + + E+++ L + G LR G ++ + I +
Sbjct: 104 WPTSTIEKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKV 163
Query: 223 ALVSTHPRKTLETAIDSIGIEEYFTA--IVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280
A+ ST K + ++++ E + A +DV + KPDP+++ AA+ L P RC+
Sbjct: 164 AVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223
Query: 281 VFGNSNQTVEAAHDARMKCV 300
V +S ++AA A M+C+
Sbjct: 224 VVEDSVIGLQAAKAAGMRCI 243
|
Length = 286 |
| >gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 4e-07
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 14/204 (6%)
Query: 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS-RD 179
+ + G ++++ + +A G SP P + G +AI +L D
Sbjct: 4 VVLDMAGTTVDEDGLVY-RALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLAADGAD 62
Query: 180 PAELRRMASRMEEIY-QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
AE + + EE +A G G++E L I +AL + R T E ++
Sbjct: 63 EAEAQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLE 122
Query: 239 SIG--IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE--RCIVFGNSNQTVEAAHD 294
+G + + A+V DV G+P P++ + A L + + V G++ +EA +
Sbjct: 123 KLGWTVGDDVDAVVCPSDVAAGRPAPDL-ILRAMELTGVQDVQSVAVAGDTPNDLEAGIN 181
Query: 295 ARMKCVAVA----SKHPVYELGAA 314
A AV H EL
Sbjct: 182 A--GAGAVVGVLTGAHDAEELSRH 203
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220 |
| >gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 150 KSPPPAF-ILRRIEGMKNEQAISEVL------CWSRDPAELRRMASRMEEIYQALQGGI- 201
K+ AF G+ +Q +++ DP ++ EE+Y
Sbjct: 47 KAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAGVPDPESFEKIF---EELYSYFATPEP 103
Query: 202 YRLRTGSKEFVNILMHYKIPMALVS-THPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKP 260
+++ + + + L + + ++S R L ++++G+ EYF +V + +V KP
Sbjct: 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR--LRGLLEALGLLEYFDFVVTSYEVGAEKP 161
Query: 261 DPEMFVYAAQLLKFIPERCIVFGNS 285
DP++F A + PE + G+S
Sbjct: 162 DPKIFQEALERAGISPEEALHIGDS 186
|
This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 22/111 (19%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 191 EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIV 250
Y L+ R+ G ++ + L + +++ ++ +G+ ++F A++
Sbjct: 82 VYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVI 141
Query: 251 AAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS-NQTVEAAHDARMKCV 300
+E+ KP P++F A + L PE ++ G+ ++ ++ A + MK V
Sbjct: 142 TSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTV 192
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 48.3 bits (115), Expect = 2e-06
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFV 266
G ++ + L + MAL++ P + + +D + I YF I+ + + + KPDP +
Sbjct: 105 GVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALL 164
Query: 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA 303
+ ++ P + + G+S V AA A ++CVA++
Sbjct: 165 FVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALS 201
|
Length = 272 |
| >gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 7e-06
Identities = 23/85 (27%), Positives = 45/85 (52%)
Query: 223 ALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282
A V+ PR+ E I +G+ ++F A++ + KP P+ ++ A ++LK + VF
Sbjct: 128 AAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187
Query: 283 GNSNQTVEAAHDARMKCVAVASKHP 307
+S ++A A M V + +++P
Sbjct: 188 EDSVSGIKAGVAAGMPVVGLTTRNP 212
|
Length = 248 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 5e-05
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 204 LRTGSKEFVNILMHYKIPMAL-VSTHPRKTLETAIDSIGIEEYFTA---IVAAED--VHR 257
L G++ V L IP+A+ +H R + + E F+ +V +D V +
Sbjct: 79 LMPGAERLVRHLHAKGIPIAIATGSHKR---HFDLKTQRHGELFSLMHHVVTGDDPEVKQ 135
Query: 258 GKPDPEMFVYAA---QLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPVYELGA 313
GKP P++F+ AA + P + +VF ++ VEAA +A M V V +
Sbjct: 136 GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKG 195
Query: 314 ADLVVRHLDE 323
AD V+ L +
Sbjct: 196 ADQVLSSLLD 205
|
Length = 220 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 35/164 (21%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 139 QAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQ 198
+A++T+ E G + + +R +G+K + I + L + + +E +Y+A
Sbjct: 24 RAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIIS--KEHGVTLAK--AELEPVYRAEV 79
Query: 199 GGIYRLR----TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT-AIVAAE 253
++ G+ + + +PM +VS P ++ ++ G+ YF + +
Sbjct: 80 ARLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGY 136
Query: 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297
D+ R KPDP + +AA+ + E CI+ +S+ ++ A M
Sbjct: 137 DIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGM 180
|
Length = 221 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 258 GKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCVAVAS-KHPVYELGAA- 314
GKP P ++ A + L ++ G+ T + A A + + V + +L A
Sbjct: 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAE 248
Query: 315 ---DLVVRHLDEL 324
VV L EL
Sbjct: 249 VKPTYVVDSLAEL 261
|
Length = 269 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 229 PRKTLETAIDSIGIEEYFTAI---VAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS 285
R A+ +GIE+ F I A KP P+ + A + PER I F +S
Sbjct: 107 DRAHARRALRRLGIEDCFDGIFCFDTANPDLLPKPSPQAYEKALREAGVDPERAIFFDDS 166
Query: 286 NQTVEAAHDARMKCVAV 302
+ + A MK V V
Sbjct: 167 ARNIAAGKALGMKTVLV 183
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
| >gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE 253
Y ++L G+ E + L K + +V+ R+T + G+ +F I +E
Sbjct: 88 YLRFLEEGHQLLPGAFELMENL-QQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSE 146
Query: 254 DVHRGKPDPEMFVYA-AQLLKFIPERCIVFGNS 285
D KPD E+F YA ++ KF E ++ G+S
Sbjct: 147 DAGIQKPDKEIFNYALERMPKFSKEEVLMIGDS 179
|
This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224 |
| >gnl|CDD|130495 TIGR01428, HAD_type_II, 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 220 IPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279
+A++S L++ + G+++ F A+++A+ V KP P+++ A + L P+
Sbjct: 109 YRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDE- 167
Query: 280 IVFGNSNQ-TVEAAHDARMKCVAVASKH 306
++F SN + A K V
Sbjct: 168 VLFVASNPWDLGGAKKFGFKTAWVNRPG 195
|
Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. Length = 198 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 368 | |||
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.97 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.97 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.97 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.97 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.96 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.96 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.96 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.96 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.96 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.95 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.95 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PLN02940 | 382 | riboflavin kinase | 99.95 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.95 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.95 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.95 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.94 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.94 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.94 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.94 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.93 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.92 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.92 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.92 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.92 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.91 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.91 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.91 | |
| PLN02811 | 220 | hydrolase | 99.9 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.9 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.9 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.9 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.89 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.88 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.88 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.88 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.86 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.85 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.84 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.83 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.82 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.82 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.82 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.81 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.8 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.79 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.78 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.76 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.76 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.75 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.74 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.74 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.73 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.71 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.71 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.69 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.66 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.66 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.66 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.64 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.63 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.63 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.59 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.56 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.56 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.56 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.55 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.55 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.55 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.54 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.51 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.49 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.46 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.43 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.43 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.42 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.41 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.41 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.4 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.37 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.36 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.35 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.34 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.29 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.28 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.28 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.27 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.27 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.27 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.23 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.19 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.16 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.15 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.14 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.11 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.11 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.09 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.06 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.06 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.05 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.05 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.04 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.04 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.0 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.99 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.98 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.98 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.93 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.89 | |
| PLN02887 | 580 | hydrolase family protein | 98.88 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.83 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.82 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.81 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.81 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.79 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.79 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.78 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.78 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.76 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.76 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 98.72 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.71 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.69 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.66 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.65 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 98.61 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.61 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.53 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.52 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.4 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.38 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.36 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.35 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.26 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.19 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.17 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.16 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.13 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.09 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.07 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.05 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.03 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.02 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.01 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.0 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.0 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.97 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.95 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.95 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 97.92 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.91 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 97.89 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.79 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.79 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.78 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.78 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.77 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.76 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.75 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.74 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.74 | |
| PLN02423 | 245 | phosphomannomutase | 97.63 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.62 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.59 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.56 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.53 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.44 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 97.4 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.4 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.35 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.34 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.33 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.28 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.23 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 97.19 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.19 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 97.1 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.09 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 96.99 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.98 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.98 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 96.81 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.63 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.52 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.52 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 96.44 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.18 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 95.97 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 95.85 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 95.79 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 95.51 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 95.41 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 95.37 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 95.31 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 95.17 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 95.1 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 94.93 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 94.89 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 94.58 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 94.51 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.81 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 93.7 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 93.0 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 92.82 | |
| PLN02580 | 384 | trehalose-phosphatase | 92.75 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 92.19 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 92.09 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 91.01 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 90.97 | |
| PLN02580 | 384 | trehalose-phosphatase | 90.58 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 90.36 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 89.76 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 89.49 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 88.26 | |
| PLN03017 | 366 | trehalose-phosphatase | 87.57 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 86.94 | |
| PLN02151 | 354 | trehalose-phosphatase | 86.89 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 86.83 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 83.71 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 83.49 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 83.17 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 81.61 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 81.45 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 81.05 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 80.28 |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=599.62 Aligned_cols=368 Identities=80% Similarity=1.285 Sum_probs=348.2
Q ss_pred CCCCCCCCCcccCCCccccCCcccCCchhcccceeeeccC-CCCccccccccchhhHhhhhhcccccchhhhccCCCccc
Q 043738 1 HPPLCQGIPVRDLSSKKKFPDCCRFPVTEFLGRRIVNYCP-PPRMKLSRSINKSINALAMELTKETYSFREEEKIPLDWR 79 (368)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (368)
|||+|+|++++|.|+||+++.+||||+++|.|+|+|++++ ++|+|++|+++++||||||++|||++||||+++||+.|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (381)
T PLN02575 13 HRPLCGRLSVKDESYRRKSQSSCRFPVKEFVGRRLVASSPMLQRVKKDRLVVTSIKALAMELTKEAYSYREEERIPRTWN 92 (381)
T ss_pred cccccccccccchhhhhhccccccCccHHhhccceeeccccccccccCceeeeeHHHHHHHHhhhhcccchhhcCCCccc
Confidence 8999999999999999999999999999999999999998 888899999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCChhhhhcccCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHH
Q 043738 80 YQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILR 159 (368)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~ 159 (368)
++.++|++++|..|||+|++++++++||+.|+++|+++|++|||||||||+|+...++..+|.++++++|.........+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~ 172 (381)
T PLN02575 93 YRLDTGADRKPGLWPPENRADNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILR 172 (381)
T ss_pred cccccCCCCCCCCCCCCCccccccccCHHHHHHhccCCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877888899999999999887777778
Q ss_pred HHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH
Q 043738 160 RIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239 (368)
Q Consensus 160 ~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~ 239 (368)
.+.|++..+.+..++.+......+..+...+.+.|.........++||+.++|+.|+++|++++|+||+....++..+++
T Consensus 173 ~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~ 252 (381)
T PLN02575 173 RVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGS 252 (381)
T ss_pred HhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 89999999998888776556677788888888888877766578999999999999999999999999999999999999
Q ss_pred cCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc
Q 043738 240 IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 240 ~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
+|+..||+.+++++++...||++++|..+++++|+.|++|++|||+.+|+++|+++||.+|++.+++...++..++++++
T Consensus 253 lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~ 332 (381)
T PLN02575 253 IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR 332 (381)
T ss_pred cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999997666666666999999
Q ss_pred CchhhhHHHHhccccccccccCCCCCCcchhhhhcCCCCCCccccccCC
Q 043738 320 HLDELSVVDLKNLADIESTEFGSVEPEMEVEEEEEGYPSSLTTVDDIFW 368 (368)
Q Consensus 320 sl~eL~~~~l~~L~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (368)
++.||....+++|.++++++||+||||+|||+||++.+||+|||||+||
T Consensus 333 s~~EL~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (381)
T PLN02575 333 RLDELSIVDLKNLADIESPEFGPPEPELEMEKEEDRELPSSAGVDDIFW 381 (381)
T ss_pred CHHHHHHHHHhhhhhcCccccCCCCCccccccccccCCCcccccccccC
Confidence 9999999999999999999999999999999999999999999999999
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=320.87 Aligned_cols=259 Identities=66% Similarity=1.141 Sum_probs=229.5
Q ss_pred CCCCCCCCCCChhhhhcccCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHh
Q 043738 96 ENKADNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLC 175 (368)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~ 175 (368)
.-++++.++.||+.++.+.++.+++|||||||||+|+...++..+|.++++++|+........+.+.|.+....+..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~ 81 (260)
T PLN03243 2 RDRADDLSLNNPLLRQHRLGCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLC 81 (260)
T ss_pred cccccchhhcCHHHHHHHhcCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhc
Confidence 45679999999999999999999999999999999987678888999999999998877777778899998888887766
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC
Q 043738 176 WSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV 255 (368)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v 255 (368)
+.........+...+...+.........++||+.++|+.|+++|++++|+||+....+...++++|+..||+.+++++++
T Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~ 161 (260)
T PLN03243 82 WSRDFLQMKRLAIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDV 161 (260)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccC
Confidence 54455556666666666665444445688999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhccccc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADI 335 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~d~ 335 (368)
..+||+|++|..+++++|+.|++|++|||+.+|+++|+++||.+|++.+......+..+++++.++.++....+++|+|+
T Consensus 162 ~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~ 241 (260)
T PLN03243 162 YRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSDL 241 (260)
T ss_pred CCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999999865555556669999999999999999999999
Q ss_pred cccccCCCCCCcchhhhhc
Q 043738 336 ESTEFGSVEPEMEVEEEEE 354 (368)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~ 354 (368)
.++||+.|||.+|.|.||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~ 260 (260)
T PLN03243 242 DSPEFQIPEPQLEEEVEEE 260 (260)
T ss_pred CCccccCcchHHHHHhhcC
Confidence 9999999999999766653
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=234.65 Aligned_cols=206 Identities=19% Similarity=0.341 Sum_probs=169.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCC----CCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGK----SPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEE 192 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~----~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~ 192 (368)
++++|||||||||+|+. ..+..+|.++++++|. ......+...+.|.+..+.+..++.. .......+...+..
T Consensus 21 ~~k~viFDlDGTLiDs~-~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 97 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSD-PLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD--DLERGLKFTDDKEA 97 (248)
T ss_pred ccCEEEEcCCCccCcCH-HHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc--chhhHHHHHHHHHH
Confidence 47899999999999876 5667889999999864 34444445666788877777665532 12222233444555
Q ss_pred HHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc
Q 043738 193 IYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 193 ~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l 272 (368)
.|.........++||+.++|+.|+++|++++|+||+....++..++++|+..||+.+++++++...||+|++|..+++++
T Consensus 98 ~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~ 177 (248)
T PLN02770 98 LFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVL 177 (248)
T ss_pred HHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHh
Confidence 66665555578999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc--CCCcEEEcCchhhh
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL--GAADLVVRHLDELS 325 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~--~~ad~vv~sl~eL~ 325 (368)
|++|++|++|||+.+|+++|+++|+.+|++.++.....+ ..++++++++.++.
T Consensus 178 ~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~ 232 (248)
T PLN02770 178 KVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPK 232 (248)
T ss_pred CCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhH
Confidence 999999999999999999999999999999865443332 25999999999965
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=231.73 Aligned_cols=209 Identities=20% Similarity=0.242 Sum_probs=167.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHH-------------HhcCCCHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV-------------LCWSRDPAELR 184 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-------------l~~~~~~~~~~ 184 (368)
+++|||||||||+|+.......++.++++++|...+...+ ....|.+....+... +........+.
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEA-RGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIE 80 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHH-HHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHH
Confidence 6899999999999975433457889999999987666553 445666654443332 12223444555
Q ss_pred HHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCCCCCHH
Q 043738 185 RMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRGKPDPE 263 (368)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~KP~~~ 263 (368)
.+...+.+.+.........++||+.++|+.|+++|++++|+||+....++..++++|+..+| +.+++++++...||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~ 160 (253)
T TIGR01422 81 AIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPW 160 (253)
T ss_pred HHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHH
Confidence 66666666655555455789999999999999999999999999999999999999999986 99999999999999999
Q ss_pred HHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc------------------------ccc--CCCcE
Q 043738 264 MFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPV------------------------YEL--GAADL 316 (368)
Q Consensus 264 ~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~------------------------~~~--~~ad~ 316 (368)
+|..+++++|+. |++|++|||+.+|+++|+++||.+|+|.++... .++ ..||+
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHY 240 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCE
Confidence 999999999995 999999999999999999999999999865431 122 24999
Q ss_pred EEcCchhhhHH
Q 043738 317 VVRHLDELSVV 327 (368)
Q Consensus 317 vv~sl~eL~~~ 327 (368)
+++++.||...
T Consensus 241 v~~~~~el~~~ 251 (253)
T TIGR01422 241 VIDTLAELPAV 251 (253)
T ss_pred ehhcHHHHHHh
Confidence 99999998643
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-29 Score=225.01 Aligned_cols=204 Identities=21% Similarity=0.316 Sum_probs=168.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCC-CCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKS-PPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQ 195 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (368)
++++|+||+||||+|+. ..+..+|.+++++++.. .+... +....|.+..+.+..+ .+.....+...+.+.+.
T Consensus 2 ~~~~viFD~DGTL~ds~-~~~~~a~~~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 74 (214)
T PRK13288 2 KINTVLFDLDGTLINTN-ELIISSFLHTLKTYYPNQYKRED-VLPFIGPSLHDTFSKI-----DESKVEEMITTYREFNH 74 (214)
T ss_pred CccEEEEeCCCcCccCH-HHHHHHHHHHHHHhCCCCCCHHH-HHHHhCcCHHHHHHhc-----CHHHHHHHHHHHHHHHH
Confidence 37899999999999876 46678899999998765 34444 4566787776666543 23445555555665555
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
........++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++++...||++++|..++++++++
T Consensus 75 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~ 154 (214)
T PRK13288 75 EHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAK 154 (214)
T ss_pred HhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 44444468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhHH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSVV 327 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~~ 327 (368)
|++|++|||+.+|+++|+++|+.+|++.++.. ..++ ..++++++++.++...
T Consensus 155 ~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 155 PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 99999999999999999999999999986543 2222 3499999999998654
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=225.39 Aligned_cols=207 Identities=18% Similarity=0.243 Sum_probs=169.3
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
+++|||||||||+|+. ..+..++..+++++|.............|.+....+..... ........++...+.+.|...
T Consensus 12 ~k~viFD~DGTL~Ds~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 89 (229)
T PRK13226 12 PRAVLFDLDGTLLDSA-PDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFP-ELDAAARDALIPEFLQRYEAL 89 (229)
T ss_pred CCEEEEcCcCccccCH-HHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHh
Confidence 5899999999999876 56678999999999986433344566667666665554432 123444556666666667665
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
......++||+.++|+.|+++|++++++||+....+...++++|+..+|+.+++++++...||+|++|..+++++|++|+
T Consensus 90 ~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~ 169 (229)
T PRK13226 90 IGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPT 169 (229)
T ss_pred hhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChh
Confidence 55556899999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-c-cc--cCCCcEEEcCchhhhH
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKHP-V-YE--LGAADLVVRHLDELSV 326 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~-~~--~~~ad~vv~sl~eL~~ 326 (368)
+|++|||+.+|+++|+++|+.+|++.++.. . .. ...++++++++.+|..
T Consensus 170 ~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~ 222 (229)
T PRK13226 170 DCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWN 222 (229)
T ss_pred hEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHH
Confidence 999999999999999999999999985542 2 11 2349999999999853
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=225.03 Aligned_cols=211 Identities=23% Similarity=0.346 Sum_probs=168.7
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR-DPAELRRMASRMEEIYQ 195 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~~ 195 (368)
.+++|+||+||||+|+. ..+..++.++++++|........+....|.........+..... ...........+.+.+.
T Consensus 6 ~~k~iiFD~DGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE-PLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVI 84 (222)
T ss_pred cCcEEEEcCCCCCCcCH-HHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 48999999999999865 56678888999999987766455667777776665554432211 11112233333333344
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
........++||+.++|+.|+++|++++++||+....++..++.+++..+|+.++++++++.+||++++|..+++++|+.
T Consensus 85 ~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 164 (222)
T PRK10826 85 SLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVD 164 (222)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCC
Confidence 44444468999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccc--cCCCcEEEcCchhhhHHH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYE--LGAADLVVRHLDELSVVD 328 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~--~~~ad~vv~sl~eL~~~~ 328 (368)
|++|++|||+.+|+++|+++|+++|++..+....+ ...+++++.++.|+....
T Consensus 165 ~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~~ 219 (222)
T PRK10826 165 PLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAAD 219 (222)
T ss_pred HHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhhh
Confidence 99999999999999999999999999996654332 234899999999986554
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-28 Score=221.84 Aligned_cols=205 Identities=19% Similarity=0.348 Sum_probs=168.7
Q ss_pred EEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHH
Q 043738 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS---RDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~l~~~~~~~~~~~ 197 (368)
|||||||||+|+.. .+..++..+++++|........+....|......+..++... .+......+.+.+.+.|...
T Consensus 1 viFD~DGTL~Ds~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (213)
T TIGR01449 1 VLFDLDGTLVDSAP-DIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEV 79 (213)
T ss_pred CeecCCCccccCHH-HHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHh
Confidence 69999999998764 455788999999998643333355667877766666655322 23444566666777777766
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
......++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++++++...||++++|..+++++|++|+
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 159 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ 159 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence 55557899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhH
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSV 326 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~ 326 (368)
+|++|||+.+|+++|+++|+.+|++.++.. ...+ ..|+++++++.+|..
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 999999999999999999999999985443 2222 349999999999854
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=221.63 Aligned_cols=209 Identities=22% Similarity=0.297 Sum_probs=173.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS-RDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~ 196 (368)
+++|||||||||+|+. ..+..+|.++++++|......+..+.+.|....+.+..++... ........+...+.+.+..
T Consensus 1 ~k~iiFD~DGTL~ds~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (220)
T TIGR03351 1 ISLVVLDMAGTTVDED-GLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAE 79 (220)
T ss_pred CcEEEEecCCCeeccC-chHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 5789999999999876 4667889999999999877766655577888887777766432 2344556666666666665
Q ss_pred HHC-CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc--ccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 197 LQG-GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE--EYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 197 ~~~-~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~--~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
... ....++||+.++|+.|+++|++++++||+....+...++++|+. .+|+.++++++....||+|++|..+++++|
T Consensus 80 ~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~ 159 (220)
T TIGR03351 80 AYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG 159 (220)
T ss_pred HhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence 543 23589999999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred CC-CCcEEEEcCCHhhHHHHHHcCCeE-EEEcCCC-Ccccc--CCCcEEEcCchhhhHH
Q 043738 274 FI-PERCIVFGNSNQTVEAAHDARMKC-VAVASKH-PVYEL--GAADLVVRHLDELSVV 327 (368)
Q Consensus 274 i~-p~~~l~IGDs~nDl~~A~~aG~~~-I~v~~~~-~~~~~--~~ad~vv~sl~eL~~~ 327 (368)
+. |++|++|||+.+|+++|+++||.+ |++..+. ....+ ..+++++.++.+|...
T Consensus 160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 97 799999999999999999999999 8887543 33222 3489999999988543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=228.26 Aligned_cols=211 Identities=18% Similarity=0.215 Sum_probs=167.5
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHH-------------HhcCCCHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV-------------LCWSRDPAEL 183 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-------------l~~~~~~~~~ 183 (368)
.+++|||||||||+|+.......+|.++++++|...+... .....|.+....+..+ ++........
T Consensus 3 ~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 81 (267)
T PRK13478 3 KIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEE-ARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEADV 81 (267)
T ss_pred ceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHH-HHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHHH
Confidence 4899999999999997543335789999999998766555 3555676654433332 2222234445
Q ss_pred HHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCCCCCH
Q 043738 184 RRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRGKPDP 262 (368)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~KP~~ 262 (368)
..+...+.+.+.........++||+.++|+.|+++|++++|+||.....+...++.+++..+| +.+++++++...||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p 161 (267)
T PRK13478 82 DALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYP 161 (267)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCCh
Confidence 555555666655555555689999999999999999999999999999999999999988875 8999999999999999
Q ss_pred HHHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc------------------------ccc--CCCc
Q 043738 263 EMFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPV------------------------YEL--GAAD 315 (368)
Q Consensus 263 ~~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~------------------------~~~--~~ad 315 (368)
++|..+++++|+. +++|++|||+.+|+++|+++|+.+|+|.++... ..+ ..|+
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~ 241 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAH 241 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999996 699999999999999999999999999865431 222 3499
Q ss_pred EEEcCchhhhHHH
Q 043738 316 LVVRHLDELSVVD 328 (368)
Q Consensus 316 ~vv~sl~eL~~~~ 328 (368)
++++++.+|...+
T Consensus 242 ~vi~~~~~l~~~l 254 (267)
T PRK13478 242 YVIDTIADLPAVI 254 (267)
T ss_pred eehhhHHHHHHHH
Confidence 9999999997654
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=220.14 Aligned_cols=210 Identities=24% Similarity=0.388 Sum_probs=173.3
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.++.|+||+||||+|+... ...+++.+++++|.........+.+.|......+...+......... .....+.+.|..
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (220)
T COG0546 3 MIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAA-ELVERLREEFLT 80 (220)
T ss_pred CCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHH-HHHHHHHHHHHH
Confidence 4789999999999997654 44778899999999855555578888999888888776544444322 333334444433
Q ss_pred HHCCc--cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 197 LQGGI--YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 197 ~~~~~--~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
..... ..++||+.++|..|++.|++++|+||.+...+...++++|+..+|+.++++++....||+|..+..+++++|+
T Consensus 81 ~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~ 160 (220)
T COG0546 81 AYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGL 160 (220)
T ss_pred HHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCC
Confidence 33332 5899999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC---ccccCCCcEEEcCchhhhHHH
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKHP---VYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~---~~~~~~ad~vv~sl~eL~~~~ 328 (368)
+|++++||||+.+|++||+++|+.+|+|.++.. ......+|+++.++.||...+
T Consensus 161 ~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 161 DPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred ChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 988999999999999999999999999997653 233345999999999997554
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-28 Score=218.82 Aligned_cols=216 Identities=23% Similarity=0.363 Sum_probs=180.6
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEE 192 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~ 192 (368)
.++++|+||+||||+|+.. ....++..+++++|........+....|......+...+.+ .........+...+.+
T Consensus 4 ~~~~~iiFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAP-DLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFDR 82 (226)
T ss_pred CcCcEEEEcCCcccccCHH-HHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHHH
Confidence 3589999999999998654 55678899999999875444455677787777766665543 3455667777777777
Q ss_pred HHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc
Q 043738 193 IYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 193 ~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l 272 (368)
.|.........++||+.++|+.+++.|++++++||+....+..+++++|+..+|+.+++++++...||++++|..+++++
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~ 162 (226)
T PRK13222 83 HYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKL 162 (226)
T ss_pred HHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHc
Confidence 77776655568999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-ccc--cCCCcEEEcCchhhhHHHHhcc
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYE--LGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~--~~~ad~vv~sl~eL~~~~l~~L 332 (368)
++++++|++|||+.+|+++|+++|+.+|++.++.. ..+ ...++++++++.+|...+.+.|
T Consensus 163 ~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~~~ 225 (226)
T PRK13222 163 GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGLAL 225 (226)
T ss_pred CCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHHhc
Confidence 99999999999999999999999999999985543 222 2359999999999988876665
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=224.69 Aligned_cols=224 Identities=19% Similarity=0.276 Sum_probs=178.9
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc-----CCCHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW-----SRDPAELRRMASRM 190 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~~~~~~~~l~~~~ 190 (368)
+-+++|||||||||+|+. ..+..++..+++++|...........+.|.+..+.....+.. ..+......+...+
T Consensus 11 ~~~k~viFDlDGTL~Ds~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSV-PDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALF 89 (272)
T ss_pred ccCCEEEEcCCCccccCH-HHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHH
Confidence 347899999999999865 566688999999999876544445667777766665554321 22344555665666
Q ss_pred HHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 191 EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 191 ~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.+.|.... ....++||+.++|+.|++.|++++++||.+...+...++++++..+|+.+++++++...||++++|..+++
T Consensus 90 ~~~~~~~~-~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~ 168 (272)
T PRK13223 90 MEAYADSH-ELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMK 168 (272)
T ss_pred HHHHHhcC-cCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHH
Confidence 66555422 23578999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-Ccccc--CCCcEEEcCchhhhHHHHhccccccccccC
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYEL--GAADLVVRHLDELSVVDLKNLADIESTEFG 341 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~--~~ad~vv~sl~eL~~~~l~~L~d~~~~~~~ 341 (368)
++|+++++|++|||+.+|+++|+++||.++++..+. ....+ ..++++++++.+|...+....+++..+..+
T Consensus 169 ~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~~~~~~~~~~~~~ 242 (272)
T PRK13223 169 MAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCADPAAEITLPDLQ 242 (272)
T ss_pred HhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHhcccccccccccC
Confidence 999999999999999999999999999999998643 33332 359999999999986655555555555555
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=219.00 Aligned_cols=203 Identities=25% Similarity=0.403 Sum_probs=160.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+++|||||||||+|+. ..+..+|.++++++|++. ......+.|.+....+..+... .....+......+. .+..
T Consensus 2 ~~k~viFDlDGTL~Ds~-~~~~~a~~~~~~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~ 76 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSL-PAVERAWSNWADRHGIAP--DEVLNFIHGKQAITSLRHFMAG-ASEAEIQAEFTRLE-QIEA 76 (218)
T ss_pred CCCEEEEcCCCCcCcCH-HHHHHHHHHHHHHcCCCH--HHHHHHHcCCCHHHHHHHHhcc-CCcHHHHHHHHHHH-HHHH
Confidence 37899999999999865 566789999999999853 3445566688777776665431 22222222222111 1222
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
.......++||+.++|+.|+++|++++++||+....+...++..++ .+|+.+++++++...||+|++|..+++++|+.|
T Consensus 77 ~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p 155 (218)
T PRK11587 77 TDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAP 155 (218)
T ss_pred hhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCc
Confidence 2234468999999999999999999999999988888888888888 468889999888889999999999999999999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
++|++|||+.+|+++|+++|+.+|++.++........++++++++.||.
T Consensus 156 ~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 156 QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred ccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999986654444456999999999984
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-28 Score=219.25 Aligned_cols=187 Identities=29% Similarity=0.462 Sum_probs=151.4
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP--AELRRMASRMEEIYQ 195 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--~~~~~l~~~~~~~~~ 195 (368)
+++|||||||||+|+ ..++.++|.++++++|+..+.+..... .|....+.+..+....... ...............
T Consensus 2 ~~avIFD~DGvLvDs-e~~~~~a~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T COG0637 2 IKAVIFDMDGTLVDS-EPLHARAWLEALKEYGIEISDEEIREL-HGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEA 79 (221)
T ss_pred CcEEEEcCCCCcCcc-hHHHHHHHHHHHHHcCCCCCHHHHHHH-HCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHH
Confidence 689999999999987 578889999999999999888775444 5655555444443322111 111111111122222
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
.......+.||+.++|+.|+++|+++++.|++++..+...++.+|+..||+.+++++++..+||+|++|..++++||++
T Consensus 80 -~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~ 158 (221)
T COG0637 80 -LELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD 158 (221)
T ss_pred -hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC
Confidence 2233369999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
|++||+|+|+.+++++|+++||.+|++...+.
T Consensus 159 P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 159 PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred hHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999999999999999999997554
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=216.94 Aligned_cols=209 Identities=18% Similarity=0.268 Sum_probs=161.9
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
++++|+||+||||+|+. .+...+|.++++++|.......+...+.|.+..+.+..++...........+...+.+.+..
T Consensus 3 ~~~~viFD~DGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSE-VICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVAR 81 (221)
T ss_pred CCCEEEECCCCCCCCCh-HHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 47899999999999865 56668889999999988776666777788888777776654322111122333334443433
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
.......++||+.++|+.| +++++|+||+....+...++++|+..+|+ .++++++++..||++++|..+++++|++
T Consensus 82 ~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~ 158 (221)
T PRK10563 82 LFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVN 158 (221)
T ss_pred HHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCC
Confidence 3334468899999999999 38999999999999999999999999996 6788888899999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcC-CCCccccCCCcEEEcCchhhhHHHH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPVYELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~-~~~~~~~~~ad~vv~sl~eL~~~~l 329 (368)
|++|++|||+.+|+++|+++|+.+|++.. ++.......++.++.++.||...+.
T Consensus 159 p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 213 (221)
T PRK10563 159 VENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELWK 213 (221)
T ss_pred HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999863 3322111235566778877765443
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=205.25 Aligned_cols=186 Identities=24% Similarity=0.379 Sum_probs=150.3
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
|+.++++|||||||||+|+. ..+..+|..+++++|...+.. ......|.+..+.+..++...........+...+...
T Consensus 1 ~~~~~~~viFD~DGTLiDs~-~~~~~a~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTE-PTHRKAWREVLGRYGLQFDEQ-AMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEA 78 (188)
T ss_pred CCCcceEEEEcCCCcCccCH-HHHHHHHHHHHHHcCCCCCHH-HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 45668999999999999875 466788999999999876544 3567778877776666654321111122333334444
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
+.........++|+ .++|..|++. ++++|+||+....+...++++|+..||+.+++++++...||+|++|..+++++|
T Consensus 79 ~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~ 156 (188)
T PRK10725 79 VKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMG 156 (188)
T ss_pred HHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcC
Confidence 54444444577886 5899999875 899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
++|++||+|||+.+|+++|+++|+++|++.
T Consensus 157 ~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 157 VQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred CCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999999875
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-26 Score=213.89 Aligned_cols=203 Identities=15% Similarity=0.233 Sum_probs=164.6
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
++++||||||||+|+.+ .+..++.++++++|.+.........+.+.....++..+ ..+......+...+.+.+...
T Consensus 62 ~k~vIFDlDGTLiDS~~-~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~ 137 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLP-TVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRRA---GLSPWQQARLLQRVQRQLGDC 137 (273)
T ss_pred cCEEEECCcCccccCHH-HHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHc---CCCHHHHHHHHHHHHHHHHhh
Confidence 78999999999999764 55678899999999875544556777777766665543 234445556666666666554
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
. ....++||+.++|+.|+++|++++|+||+....+...++++|+..+|+.++++++. +++++.+..++++++++|+
T Consensus 138 ~-~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~p~ 213 (273)
T PRK13225 138 L-PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQPA 213 (273)
T ss_pred c-ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcChh
Confidence 3 34688999999999999999999999999999999999999999999999888765 2457899999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcc-cc--CCCcEEEcCchhhhHHH
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKHPVY-EL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~-~~--~~ad~vv~sl~eL~~~~ 328 (368)
+|++|||+.+|+++|+++||.+|++.++.... ++ ..|+++++++.+|...+
T Consensus 214 ~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 214 AVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV 267 (273)
T ss_pred HEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence 99999999999999999999999998654332 22 34999999999997654
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=226.03 Aligned_cols=207 Identities=25% Similarity=0.344 Sum_probs=167.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+++||||+||||+|+. ..+..++..+++++|...+... .....|....+.+..++...........+...+.+.+..
T Consensus 10 ~ik~VIFDlDGTLvDt~-~~~~~a~~~~~~~~G~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (382)
T PLN02940 10 LVSHVILDLDGTLLNTD-GIVSDVLKAFLVKYGKQWDGRE-AQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSE 87 (382)
T ss_pred cCCEEEECCcCcCCcCH-HHHHHHHHHHHHHcCCCCCHHH-HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 47899999999999866 5677889999999998776655 567778887776666554322122223333444444444
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHH-HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID-SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~-~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
... ...++||+.++|+.|+++|++++|+||.....+...++ ++|+..+|+.+++++++...||++++|..+++++|+.
T Consensus 88 ~~~-~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~ 166 (382)
T PLN02940 88 QWC-NIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE 166 (382)
T ss_pred HHc-cCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC
Confidence 333 36889999999999999999999999999999988887 7899999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-ccccCCCcEEEcCchhhhH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYELGAADLVVRHLDELSV 326 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~~~ad~vv~sl~eL~~ 326 (368)
|++|++|||+.+|+++|+++||.+|++.++.. ......+++++.++.++..
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQP 218 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCH
Confidence 99999999999999999999999999986543 2233458999999988753
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=202.35 Aligned_cols=181 Identities=31% Similarity=0.519 Sum_probs=154.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEEIY 194 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~~~ 194 (368)
+++|+||+||||+|+. ..+..++..+++++|.... ........|......+..++.. ......+..+...+...+
T Consensus 1 ~~~iiFD~DGTL~ds~-~~~~~~~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTA-PLHAQAWKHLADKYGIEFD-KQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELY 78 (185)
T ss_pred CCeEEEcCCCcccCCh-HHHHHHHHHHHHHcCCCCC-HHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 4789999999999876 5667888899999998765 3445666788777777776643 345666677777777777
Q ss_pred HHHH-CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 195 QALQ-GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 195 ~~~~-~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
.... .....++||+.++|+.|+++|++++++||+ ..++..++++|+..+|+.++++++++..||++++|..+++++|
T Consensus 79 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~ 156 (185)
T TIGR02009 79 RELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLG 156 (185)
T ss_pred HHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcC
Confidence 6665 334689999999999999999999999998 6678899999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
++|++|++|||+.+|+++|+++|+.+|+|
T Consensus 157 ~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 157 VSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-26 Score=214.17 Aligned_cols=216 Identities=24% Similarity=0.341 Sum_probs=159.9
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCC-C--CHHHHHH-HHhCCCHHHHHHHHH--hcC--------CCHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKS-P--PPAFILR-RIEGMKNEQAISEVL--CWS--------RDPAE 182 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~-~--~~~~~~~-~~~g~~~~~~~~~~l--~~~--------~~~~~ 182 (368)
.+++|||||||||+|+...++..+|.++++++|.. . ....+.. ...|.+...+...+. .+. ..+..
T Consensus 39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 118 (286)
T PLN02779 39 LPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKDEEE 118 (286)
T ss_pred CCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCccchh
Confidence 36899999999999976367778999999999983 2 2222111 114544444333221 111 11222
Q ss_pred ----HHHHHHHHHHHHHHHHCCc-cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc--EEEeCCCC
Q 043738 183 ----LRRMASRMEEIYQALQGGI-YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVAAEDV 255 (368)
Q Consensus 183 ----~~~l~~~~~~~~~~~~~~~-~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~~e~v 255 (368)
+..+...+...|....... +.++||+.++|+.|++.|++++|+||+....+...++.++...+|+ .+++++++
T Consensus 119 ~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~ 198 (286)
T PLN02779 119 RKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV 198 (286)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc
Confidence 2233334445555554332 5899999999999999999999999999999988888774444443 23378888
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-CccccCCCcEEEcCchhhhHHHHhcc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYELGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~~~ad~vv~sl~eL~~~~l~~L 332 (368)
...||+|++|..+++++|++|++|++|||+.+|+++|+++||.+|++..+. ...++..+|++++++.++....++-|
T Consensus 199 ~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~~~ 276 (286)
T PLN02779 199 PKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFDLL 276 (286)
T ss_pred CCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchhhhHHH
Confidence 889999999999999999999999999999999999999999999998543 33445569999999999998887665
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-26 Score=204.03 Aligned_cols=197 Identities=20% Similarity=0.319 Sum_probs=155.1
Q ss_pred EEEeccCccccCcchHHHHHHHHHHHHh-CCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHC
Q 043738 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEE-GKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQG 199 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~~~a~~~~~~~~-g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 199 (368)
|||||||||+|+. .++.+++.++++++ |.............|......+..+ . ......... ....+ . ..
T Consensus 1 iiFDlDGTL~Ds~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--~~~~~~~~~---~~~~~-~-~~ 71 (205)
T TIGR01454 1 VVFDLDGVLVDSF-AVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMRIM-G--LPLEMEEPF---VRESY-R-LA 71 (205)
T ss_pred CeecCcCccccCH-HHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHHHc-C--CCHHHHHHH---HHHHH-H-hh
Confidence 6999999999865 56678888888874 7643333345666777766665542 1 111111111 12222 1 22
Q ss_pred CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 200 GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 200 ~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
....++||+.++|+.|+++|++++++||+....+...++++|+..+|+.++++++....||++++|..+++++|+++++|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 34689999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhH
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSV 326 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~ 326 (368)
++|||+.+|+++|+++||.+|++.++.. ..++ ..++++++++.+|..
T Consensus 152 l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 9999999999999999999999986543 2232 349999999999864
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-26 Score=205.48 Aligned_cols=201 Identities=17% Similarity=0.244 Sum_probs=145.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHH---HHHhCCCCCHHHHHHHHh------CCC----HHHHHHHHHhcCCCHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTL---AQEEGKSPPPAFILRRIE------GMK----NEQAISEVLCWSRDPAELR 184 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~---~~~~g~~~~~~~~~~~~~------g~~----~~~~~~~~l~~~~~~~~~~ 184 (368)
+++|+||+||||+|+...+ ..++..+ +..+|...+...+...+. +.. .......+.. .......
T Consensus 2 ~~~viFDlDGTL~ds~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 78 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLA-EKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWE-EYNPKLV- 78 (221)
T ss_pred ceEEEEeCCCCCcCCCCcc-CHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhh-hcCHHHH-
Confidence 6899999999999976543 3445433 445666665544322211 110 1111111110 0011111
Q ss_pred HHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHH
Q 043738 185 RMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEM 264 (368)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~ 264 (368)
.......+. .......++||+.++|+.|+++|++++++||+....+...++++|+..+|+.++++++++..||++++
T Consensus 79 --~~~~~~~~~-~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~ 155 (221)
T TIGR02253 79 --AAFVYAYHK-LKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKI 155 (221)
T ss_pred --HHHHHHHHH-HHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHH
Confidence 111111112 22223588999999999999999999999999989999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCcc----ccCCCcEEEcCchhh
Q 043738 265 FVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPVY----ELGAADLVVRHLDEL 324 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~~----~~~~ad~vv~sl~eL 324 (368)
|..+++++|+++++|++|||+. +|+.+|+++|+.+|++..+.... ....+++++.++.||
T Consensus 156 ~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 156 FYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999999999999999999998 89999999999999998554321 123488999999876
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=202.33 Aligned_cols=205 Identities=16% Similarity=0.203 Sum_probs=147.7
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHH-----HHHH----
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAEL-----RRMA---- 187 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~-----~~l~---- 187 (368)
.+|+|+|||||||+|.. ...++.++++.+|........ ..+.+.. ...+..+.......... ..+.
T Consensus 2 ~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T PRK09449 2 KYDWILFDADETLFHFD---AFAGLQRMFSRYGVDFTAEDF-QDYQAVN-KPLWVDYQNGAITALQLQHTRFESWAEKLN 76 (224)
T ss_pred CccEEEEcCCCchhcch---hhHHHHHHHHHhCCCCcHHHH-HHHHHHH-HHHHHHHHcCCCCHHHHHHHHHHHHHHHcC
Confidence 37899999999999732 246778888889887554432 2221111 01111111111111111 1111
Q ss_pred ---HHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHH
Q 043738 188 ---SRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEM 264 (368)
Q Consensus 188 ---~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~ 264 (368)
..+.+.|.........++||+.++|+.|+ .|++++++||+....++..++++|+..+|+.++++++++..||++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~ 155 (224)
T PRK09449 77 VTPGELNSAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAI 155 (224)
T ss_pred CCHHHHHHHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHH
Confidence 11223333333333678999999999999 57999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCC-CCcEEEEcCCH-hhHHHHHHcCCeEEEEcC-CCCccccCCCcEEEcCchhhhHH
Q 043738 265 FVYAAQLLKFI-PERCIVFGNSN-QTVEAAHDARMKCVAVAS-KHPVYELGAADLVVRHLDELSVV 327 (368)
Q Consensus 265 ~~~~le~lgi~-p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~-~~~~~~~~~ad~vv~sl~eL~~~ 327 (368)
|..+++++|+. +++|++|||+. +|+.+|+++||.+|++.. +........++++++++.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~ 221 (224)
T PRK09449 156 FDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQL 221 (224)
T ss_pred HHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHH
Confidence 99999999985 58999999998 799999999999999984 32222222489999999999754
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=197.46 Aligned_cols=180 Identities=29% Similarity=0.494 Sum_probs=148.2
Q ss_pred EEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHH
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~~~~~ 196 (368)
+||||+||||+|+. .....++.++++.+|.+..... ...+.|.+..+.+..++.. ..+......+...+.+.|..
T Consensus 1 ~iiFD~DGTL~ds~-~~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR01990 1 AVIFDLDGVITDTA-EYHYLAWKALADELGIPFDEEF-NESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVE 78 (185)
T ss_pred CeEEcCCCccccCh-HHHHHHHHHHHHHcCCCCCHHH-HHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 48999999999876 5666889999999998865543 5667787777777666542 23455555666655555554
Q ss_pred HHCC--ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 197 LQGG--IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 197 ~~~~--~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
.... ...++||+.++|+.|+++|++++++||+. .....++++|+..+|+.++++++++..||++++|..+++++++
T Consensus 79 ~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~ 156 (185)
T TIGR01990 79 LLKELTPADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGV 156 (185)
T ss_pred HHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCC
Confidence 4321 24789999999999999999999999874 3467899999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
+|++|++|||+.+|+++|+++||.+|+|.
T Consensus 157 ~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 157 SPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred CHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-24 Score=197.90 Aligned_cols=205 Identities=19% Similarity=0.274 Sum_probs=150.9
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHH-----HHHHH-----
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAE-----LRRMA----- 187 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~-----~~~l~----- 187 (368)
+++|+||+||||+|+.. ....++.++++++|........ ....+.. ...+..+......... +..+.
T Consensus 1 ~k~viFD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQA-AEALALRLLFEDQGIPLTEDMF-AQYKEIN-QGLWRAYEEGKITKDEVVNTRFSALLKEYNT 77 (224)
T ss_pred CCEEEEcCcCcccccch-HHHHHHHHHHHHhCCCccHHHH-HHHHHHh-HHHHHHHHcCCCCHHHHHHHHHHHHHHHhCC
Confidence 57899999999998764 5556788888888886543321 1111111 1111111111111111 01111
Q ss_pred ----HHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHH
Q 043738 188 ----SRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPE 263 (368)
Q Consensus 188 ----~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~ 263 (368)
..+...|.........++||+.++|+.|++. ++++++||+....+...++.+|+..+|+.++++++++..||+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~ 156 (224)
T TIGR02254 78 EADEALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKE 156 (224)
T ss_pred CCcHHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHH
Confidence 0123333333333458899999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-CCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC-CCccccCCCcEEEcCchhhhH
Q 043738 264 MFVYAAQLL-KFIPERCIVFGNSN-QTVEAAHDARMKCVAVASK-HPVYELGAADLVVRHLDELSV 326 (368)
Q Consensus 264 ~~~~~le~l-gi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~-~~~~~~~~ad~vv~sl~eL~~ 326 (368)
+|..+++++ |++|++|++|||+. +|+++|+++||.+|+++.+ ........++++++++.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 999999999 99999999999998 8999999999999999843 332223358899999999864
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-24 Score=197.74 Aligned_cols=125 Identities=14% Similarity=0.215 Sum_probs=108.1
Q ss_pred CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 200 GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 200 ~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
....++||+.++|+.|+++|++++++||+....+...++++|+..+|+.++++++++..||+|++|..+++++|++|++|
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 169 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERT 169 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCe-EEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 280 IVFGNSNQTVEAAHDARMK-CVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~-~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
++|||+.+|+++|+++||. +++|..+..... ..+..+.++++++.
T Consensus 170 l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~ 215 (224)
T PRK14988 170 LFIDDSEPILDAAAQFGIRYCLGVTNPDSGIA-EKQYQRHPSLNDYR 215 (224)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEeCCCCCcc-chhccCCCcHHHHH
Confidence 9999999999999999998 466775443222 12444456666653
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-24 Score=213.94 Aligned_cols=207 Identities=14% Similarity=0.150 Sum_probs=161.1
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCC-----CCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGK-----SPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRME 191 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~-----~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 191 (368)
.+++|||||||||+|+. ..+..+|.+++++++. .......+....|.+..+.+..++... ...........+.
T Consensus 240 m~k~vIFDlDGTLiDs~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 317 (459)
T PRK06698 240 MLQALIFDMDGTLFQTD-KILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDH-SLEIREQTDAYFL 317 (459)
T ss_pred hhhheeEccCCceecch-hHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhc-chhHHHHHHHHHH
Confidence 36899999999999976 4566889988888741 222234467778888888777765321 2222233334444
Q ss_pred HHHHHHH-CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 192 EIYQALQ-GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 192 ~~~~~~~-~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
+.+.... .....++||+.++|+.|+++|++++|+||+....+...++++|+..||+.+++++++. .||+|++|..+++
T Consensus 318 ~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~al~ 396 (459)
T PRK06698 318 ERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-SLNKSDLVKSILN 396 (459)
T ss_pred HHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-CCCCcHHHHHHHH
Confidence 4444332 2336889999999999999999999999999999999999999999999999998874 4678889999998
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-ccccCCCcEEEcCchhhhHHH
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~~~ad~vv~sl~eL~~~~ 328 (368)
+++ |++|++|||+.+|+.+|+++||.+|++.++.. ..+...+|++++++.++...+
T Consensus 397 ~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 397 KYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGIL 453 (459)
T ss_pred hcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHH
Confidence 875 68999999999999999999999999986543 234456999999999996654
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-24 Score=230.64 Aligned_cols=213 Identities=21% Similarity=0.321 Sum_probs=169.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC----CCHHH-HHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS----RDPAE-LRRMASRMEE 192 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~----~~~~~-~~~l~~~~~~ 192 (368)
+++|||||||||+|+. ..+.++|.++++++|+...... .....|....+++..+.... ..... ...+...+.+
T Consensus 75 ikaVIFDlDGTLiDS~-~~~~~a~~~~~~~~G~~it~e~-~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 152 (1057)
T PLN02919 75 VSAVLFDMDGVLCNSE-EPSRRAAVDVFAEMGVEVTVED-FVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLE 152 (1057)
T ss_pred CCEEEECCCCCeEeCh-HHHHHHHHHHHHHcCCCCCHHH-HHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 6899999999999876 5667889999999998876655 45667777776665443221 12221 1222222222
Q ss_pred HHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc-ccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 193 IYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE-EYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 193 ~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~-~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
.|.. .....++||+.++|+.|+++|++++|+||.....++..++++|+. .+|+.+++++++...||+|++|..++++
T Consensus 153 ~~~~--~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~ 230 (1057)
T PLN02919 153 KYAK--PNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKI 230 (1057)
T ss_pred Hhhh--cccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHH
Confidence 2211 111247999999999999999999999999999999999999996 7899999999999999999999999999
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc--CCCcEEEcCchhhhHHHHhcccc
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL--GAADLVVRHLDELSVVDLKNLAD 334 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~--~~ad~vv~sl~eL~~~~l~~L~d 334 (368)
+|+.|++|++|||+.+|+++|+++||.+|++.++....++ ..++++++++.++....+....+
T Consensus 231 lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~ 295 (1057)
T PLN02919 231 LGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGS 295 (1057)
T ss_pred cCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCC
Confidence 9999999999999999999999999999999976654444 34899999999998777765533
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=189.39 Aligned_cols=178 Identities=19% Similarity=0.342 Sum_probs=133.2
Q ss_pred eEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHH----H-------------hCCCHHHHH----HHHHhcC
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRR----I-------------EGMKNEQAI----SEVLCWS 177 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~----~-------------~g~~~~~~~----~~~l~~~ 177 (368)
|+|+||+||||+|+.. ....++.++++++|.......+... + .|....+.+ ...+...
T Consensus 1 k~viFDlDGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 79 (203)
T TIGR02252 1 KLITFDAVGTLLALKE-PVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRA 79 (203)
T ss_pred CeEEEecCCceeeeCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhc
Confidence 5799999999998764 5567889999999998665432211 0 144433222 2222211
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHC-CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC
Q 043738 178 --RDPAELRRMASRMEEIYQALQG-GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED 254 (368)
Q Consensus 178 --~~~~~~~~l~~~~~~~~~~~~~-~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~ 254 (368)
.....+... +...+..... ....++||+.++|+.|++.|++++|+||+... +...++++|+..+|+.++++++
T Consensus 80 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~ 155 (203)
T TIGR02252 80 GVPDPESFEKI---FEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYE 155 (203)
T ss_pred CCCCchhHHHH---HHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecc
Confidence 111222222 2333322221 12478999999999999999999999998765 4778899999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEE
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVA 301 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~ 301 (368)
++..||++++|..+++++|++|++|++|||+. +|+.+|+++||.+|+
T Consensus 156 ~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 156 VGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 99999999999999999999999999999998 899999999999875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.7e-24 Score=189.88 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=101.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|+++|++++++||++...+...++++|+..+|+.++++++++..||++++|..+++++|++|++|++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
|||+.+|+.+|+++||.+|+++...
T Consensus 171 vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 171 VASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred EeCCHHHHHHHHHCCCcEEEecCCC
Confidence 9999999999999999999998644
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=182.29 Aligned_cols=174 Identities=26% Similarity=0.471 Sum_probs=137.4
Q ss_pred EEEeccCccccCcchHHHHHHHH-HHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-H
Q 043738 121 AIFEWEGVIIEDNPDLEKQAWLT-LAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL-Q 198 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~~~a~~~-~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~ 198 (368)
|+||+||||+++.. ...+++.. +++.++....... ++...+....+.+..++.... .. .....+.+.+. .
T Consensus 1 iifD~dgtL~d~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~ 72 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP-AIFRALQRLALEEFGLEISAEE-LRELFGKSYEEALERLLERFG--ID----PEEIQELFREYNL 72 (176)
T ss_dssp EEEESBTTTEEHHH-HHHHHHHHHHHHHTTHHHHHHH-HHHHTTSHHHHHHHHHHHHHH--HH----HHHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHH-HHHHHHHHHHHHHhCCCCCHHH-HHHHhCCCHHHHHHHhhhccc--hh----HHHHHHHhhhhhh
Confidence 79999999998654 44456665 5777776643333 444556666666655543211 11 11122222222 2
Q ss_pred CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 199 GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 199 ~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
.....++||+.++|+.|+++|++++++||++...+...++++|+..+|+.++++++.+..||++++|..+++++|++|++
T Consensus 73 ~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 73 ESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp HGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 24479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 279 CIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
|++|||+..|+++|+++||.+|+|
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999986
|
... |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=193.19 Aligned_cols=120 Identities=16% Similarity=0.247 Sum_probs=104.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|++. ++++++||+... ++++|+..+|+.++++++++..||++++|..+++++|++|++|++
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 68899999999999975 999999998654 478999999999999999999999999999999999999999999
Q ss_pred EcCC-HhhHHHHHHcCCeEEEEcCCCCc-----cccCCCcEEEcCchhhhHH
Q 043738 282 FGNS-NQTVEAAHDARMKCVAVASKHPV-----YELGAADLVVRHLDELSVV 327 (368)
Q Consensus 282 IGDs-~nDl~~A~~aG~~~I~v~~~~~~-----~~~~~ad~vv~sl~eL~~~ 327 (368)
|||+ ..|+.+|+++||.+|+++..... .....++++|+++.||..+
T Consensus 186 VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~ 237 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSL 237 (238)
T ss_pred EcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhh
Confidence 9999 59999999999999999854321 1112388999999998653
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.6e-23 Score=185.09 Aligned_cols=208 Identities=27% Similarity=0.434 Sum_probs=174.3
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
+...+.+++||+||||+|+ ..++.++|..+++++|...+.. ......|+...++.+.++.+..++...++......+.
T Consensus 6 ~~~~~~~~lfD~dG~lvdt-e~~y~~~~~~~~~~ygk~~~~~-~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~ 83 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDT-EDLYTEAWQELLDRYGKPYPWD-VKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEI 83 (222)
T ss_pred cccceeeEEEecCCcEEec-HHHHHHHHHHHHHHcCCCChHH-HHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 4556889999999999975 5788899999999999955554 4677899999999998887777777777777777777
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC-ccccccEEEe--CCCCCCCCCCHHHHHHHHH
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG-IEEYFTAIVA--AEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~g-l~~~Fd~iv~--~e~v~~~KP~~~~~~~~le 270 (368)
....... ..+.||+..|++.|+.+|++++++|+.++......+++++ +...|+.++. +.++..+||+|++|..+++
T Consensus 84 ~~~~~~~-~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~ 162 (222)
T KOG2914|consen 84 LDRLFMN-SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAK 162 (222)
T ss_pred HHHhccc-cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHH
Confidence 7666655 5889999999999999999999999999999999999887 7788988887 6678999999999999999
Q ss_pred HcCCCC-CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchhh
Q 043738 271 LLKFIP-ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDEL 324 (368)
Q Consensus 271 ~lgi~p-~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~eL 324 (368)
.+|..+ +.|++|+|++..+++|+++||.+|+++...-...+ ..+++++.++.+.
T Consensus 163 ~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 163 RLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred hcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccccccc
Confidence 999998 99999999999999999999999999973322221 2366666665543
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-23 Score=186.20 Aligned_cols=198 Identities=20% Similarity=0.285 Sum_probs=148.8
Q ss_pred ccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc-CCCH-HHHHHHHHHHHHHHHHHHCCcc
Q 043738 125 WEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW-SRDP-AELRRMASRMEEIYQALQGGIY 202 (368)
Q Consensus 125 lDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~-~~~~~l~~~~~~~~~~~~~~~~ 202 (368)
|||||+|+. .++..+|..+++++|+..... ....+.|.....++..+... .... .....+...+...+..... ..
T Consensus 1 ~DGTL~Ds~-~~~~~a~~~~~~~~g~~~~~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 77 (220)
T PLN02811 1 MDGLLLDTE-KFYTEVQEKILARYGKTFDWS-LKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFP-TS 77 (220)
T ss_pred CCCcceecH-HHHHHHHHHHHHHcCCCCCHH-HHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHh-hC
Confidence 799999966 567789999999999976544 45677888777666655432 1110 0111222223333333332 35
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHH-HHHHcCccccccEEEeCC--CCCCCCCCHHHHHHHHHHcC---CCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLET-AIDSIGIEEYFTAIVAAE--DVHRGKPDPEMFVYAAQLLK---FIP 276 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~-~l~~~gl~~~Fd~iv~~e--~v~~~KP~~~~~~~~le~lg---i~p 276 (368)
.++||+.++|+.|+++|++++|+||........ .++..++..+|+.+++++ ++...||+|++|..++++++ +.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 157 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDP 157 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCc
Confidence 889999999999999999999999997765543 344457889999999999 88889999999999999997 999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-CccccCCCcEEEcCchhhh
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYELGAADLVVRHLDELS 325 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~~~ad~vv~sl~eL~ 325 (368)
++|++|||+..|+++|+++||.+|++..+. .......+++++.++.++.
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 999999999999999999999999997543 2223345777777777653
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-23 Score=185.91 Aligned_cols=127 Identities=27% Similarity=0.361 Sum_probs=115.2
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
..+++|++.++|+.++.. ++++++||+....+...+.++|+.++||.++++++++..||++++|..+++++|++|++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 368899999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCH-hhHHHHHHcCCeEEEEcCCCCc--cccCCCcEEEcCchhhhHHH
Q 043738 281 VFGNSN-QTVEAAHDARMKCVAVASKHPV--YELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 281 ~IGDs~-nDl~~A~~aG~~~I~v~~~~~~--~~~~~ad~vv~sl~eL~~~~ 328 (368)
+|||+. ||+.+|+++||++||++..+.. .....+++.+.++.++...+
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHH
Confidence 999999 7889999999999999955432 12245899999999997654
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=181.40 Aligned_cols=173 Identities=20% Similarity=0.261 Sum_probs=130.8
Q ss_pred EEEEeccCccccCcchHHHHHHHHHHHHhCC-CCCHHHHHHHHhCCCH--------HHHHHHHHhcCC-----CHHHHHH
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGK-SPPPAFILRRIEGMKN--------EQAISEVLCWSR-----DPAELRR 185 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~-~~~~~~~~~~~~g~~~--------~~~~~~~l~~~~-----~~~~~~~ 185 (368)
+|||||||||+|+. ..+..++..+++++|. ...... ...+.|... ...+..++.... .......
T Consensus 2 ~viFD~DGTLiDs~-~~~~~a~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
T TIGR01548 2 ALVLDMDGVMADVS-QSYRRAIIDTVEHFGGVSVTHAD-IDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEA 79 (197)
T ss_pred ceEEecCceEEech-HHHHHHHHHHHHHHcCCCCCHHH-HHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHH
Confidence 69999999999976 4667889999999984 444443 455555321 112222222111 1223344
Q ss_pred HHHHHHHHHHHHHC---------CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC
Q 043738 186 MASRMEEIYQALQG---------GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH 256 (368)
Q Consensus 186 l~~~~~~~~~~~~~---------~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~ 256 (368)
+...+.+.|..... ....+.++..++|+.|++.|++++|+||++...+...++++|+..+|+.+++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~ 159 (197)
T TIGR01548 80 VTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP 159 (197)
T ss_pred HHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC
Confidence 44555555543211 012455667999999999999999999999999999999999999999999999887
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a 295 (368)
. ||++++|..+++++|+++++|++|||+.+|+.+|+++
T Consensus 160 ~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 160 P-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred C-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 7 9999999999999999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-23 Score=184.48 Aligned_cols=184 Identities=17% Similarity=0.223 Sum_probs=127.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHH-HHHHHH------
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELR-RMASRM------ 190 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~l~~~~------ 190 (368)
+++|||||||||+|+.. ....|...+...|.. .......+.+.........+.........+. .+.+.+
T Consensus 2 ik~viFDldGtL~d~~~--~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 77 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG--VMRRWETERGLPGLK--DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRLGH 77 (211)
T ss_pred ceEEEEecCCceecCHH--HHHHHHHHcCCCCCc--cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhccccCC
Confidence 57999999999998643 334555544334443 2222344455443332222211111222221 111111
Q ss_pred ----HHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHH--HHHHHHHcCccccccEEEeCCCCCCCCCCHHH
Q 043738 191 ----EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKT--LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEM 264 (368)
Q Consensus 191 ----~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~--~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~ 264 (368)
...+.........++||+.++|+.|+++|++++++||+.... ....+...++..+|+.++++++++..||++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~ 157 (211)
T TIGR02247 78 DVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRI 157 (211)
T ss_pred CcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHH
Confidence 111222222346789999999999999999999999986543 33344556888999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
|..+++++|++|++|++|||+..|+.+|+++||.+|++.+.
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999999999999999999999999998754
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-22 Score=175.39 Aligned_cols=112 Identities=28% Similarity=0.521 Sum_probs=99.3
Q ss_pred HHHHHHHHHCCc-cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHH
Q 043738 190 MEEIYQALQGGI-YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYA 268 (368)
Q Consensus 190 ~~~~~~~~~~~~-~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~ 268 (368)
+...+....... ..++||+.++|+.|++.|++++++||+.... .....++|+..+|+.++++++++..||++++|..+
T Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~ 149 (183)
T TIGR01509 71 KQLFYDAILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLA 149 (183)
T ss_pred HHHHHHHHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHH
Confidence 344444433333 6889999999999999999999999998888 66666799999999999999999999999999999
Q ss_pred HHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 269 AQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 269 le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
++++|++|++|++|||+..|+.+|+++|+.+|+|
T Consensus 150 ~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 150 LKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred HHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-22 Score=177.37 Aligned_cols=188 Identities=10% Similarity=0.106 Sum_probs=134.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
+|+|||||||||+|.. .++..+++++|++. ..+ ....|..........+. .+......+...+.. ..
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~~--~~~-~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~ 68 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIPT--DHI-LKMIQDERFRDPGELFG--CDQELAKKLIEKYNN---SD 68 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCCH--HHH-HHHHhHhhhcCHHHHhc--ccHHHHHHHhhhhhH---HH
Confidence 5899999999999843 46677888888753 333 33333322222233332 223333333333321 22
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc----cccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE----YFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~----~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
......++||+.++|+.|++. ++++++||.........++.+++.. +|+.++++++. ||++++|..+++++|
T Consensus 69 ~~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---~~kp~~~~~a~~~~~ 144 (197)
T PHA02597 69 FIRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---ESKEKLFIKAKEKYG 144 (197)
T ss_pred HHHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---cccHHHHHHHHHHhC
Confidence 223357899999999999987 5788889987776666777887765 45677777663 677899999999999
Q ss_pred CCCCcEEEEcCCHhhHHHHHHc--CCeEEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 274 FIPERCIVFGNSNQTVEAAHDA--RMKCVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~a--G~~~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
|++|+||||+.+|+.+|+++ ||++|++++++. .....+++.|.++.|+.
T Consensus 145 --~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 145 --DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER-DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred --CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh-ccccchhhhhccHHHHh
Confidence 89999999999999999999 999999987764 33335779999998874
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-22 Score=175.02 Aligned_cols=169 Identities=19% Similarity=0.186 Sum_probs=122.2
Q ss_pred EEEEeccCccccCcchHHHHHHHHHH-----HHhCCCCCHHHHHH----HHhCCCHHHHHHHHHhcCCCHHHHHHHHHHH
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLA-----QEEGKSPPPAFILR----RIEGMKNEQAISEVLCWSRDPAELRRMASRM 190 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~-----~~~g~~~~~~~~~~----~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~ 190 (368)
+|+|||||||+|+...+. .++.+.+ +++|++......+. ...|......... ...... . +
T Consensus 2 ~viFDlDGTL~ds~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~---~~~~~~---~----~ 70 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIF-LQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL---HEIDAD---E----Y 70 (184)
T ss_pred eEEEeCCCCCCCCcccHH-HHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh---hCCCHH---H----H
Confidence 699999999999765554 4454443 34565433221111 1123222222211 112221 1 2
Q ss_pred HHHHHHHH-CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC----CCCCHHHH
Q 043738 191 EEIYQALQ-GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR----GKPDPEMF 265 (368)
Q Consensus 191 ~~~~~~~~-~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~----~KP~~~~~ 265 (368)
...+.... .....+++|+.++|+.|+ .+++++||+....+...++++|+..+|+.++++++.+. .||++++|
T Consensus 71 ~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~ 147 (184)
T TIGR01993 71 LRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAY 147 (184)
T ss_pred HHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHH
Confidence 22222111 112578999999999998 47999999999999999999999999999999998877 59999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 266 VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 266 ~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
..+++++|++|++|++|||+..|+++|+++||++|+|
T Consensus 148 ~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 148 EKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 9999999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-21 Score=172.69 Aligned_cols=105 Identities=16% Similarity=0.209 Sum_probs=96.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS-IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++||+.++|+.|++.|++++++||++.......+.. .++..+|+.++++++++..||+|++|..+++++|++|++|++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 5799999999999999999999999988777666655 478899999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
|||+..|+.+|+++||.+|++.++..
T Consensus 164 vgD~~~di~aA~~aG~~~i~~~~~~~ 189 (199)
T PRK09456 164 FDDNADNIEAANALGITSILVTDKQT 189 (199)
T ss_pred eCCCHHHHHHHHHcCCEEEEecCCcc
Confidence 99999999999999999999886543
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-20 Score=159.74 Aligned_cols=154 Identities=19% Similarity=0.387 Sum_probs=119.8
Q ss_pred EEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHC
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQG 199 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~ 199 (368)
+|+||+||||+|+. .....+|..++++++. +... +....|...... ..+ ...+++.. . ..
T Consensus 1 ~iifD~DGTL~d~~-~~~~~~~~~~~~~~~~--~~~~-~~~~~g~~~~~~-~~~-------------~~~~~~~~-~-~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSS-FAIRRAFEETLEEFGE--DFQA-LKALRGLAEELL-YRI-------------ATSFEELL-G-YD 60 (154)
T ss_pred CeEecCCCcccccH-HHHHHHHHHHHHHhcc--cHHH-HHHHHccChHHH-HHH-------------HHHHHHHh-C-cc
Confidence 48999999999865 4666888999888875 2222 233344332221 111 11112111 1 11
Q ss_pred CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 200 GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 200 ~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.....++|+.++|+.|+++|++++++||+....+...++++ +..+|+.++++++.. .||++++|..+++++|+++ +|
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~ 137 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EV 137 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CE
Confidence 23466799999999999999999999999999999999988 888999999999888 9999999999999999999 99
Q ss_pred EEEcCCHhhHHHHHHcC
Q 043738 280 IVFGNSNQTVEAAHDAR 296 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG 296 (368)
++|||+.+|+++|+++|
T Consensus 138 l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 138 LHVGDNLNDIEGARNAG 154 (154)
T ss_pred EEEeCCHHHHHHHHHcc
Confidence 99999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.4e-20 Score=167.16 Aligned_cols=193 Identities=20% Similarity=0.187 Sum_probs=134.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG--MKNEQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
.+|+|||||||||+++ ..+..+++.+|...........+.+ +...+.+...+..... .. ..+.+.+
T Consensus 11 ~~k~viFDfDGTL~~~------~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~----~~~~~~~ 78 (224)
T PLN02954 11 SADAVCFDVDSTVCVD------EGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKP--SL----SQVEEFL 78 (224)
T ss_pred cCCEEEEeCCCcccch------HHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC--CH----HHHHHHH
Confidence 3789999999999985 3567888888876555555555444 4444444443322111 01 1122222
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc--ccccEE--------EeCCC----CCCCCC
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE--EYFTAI--------VAAED----VHRGKP 260 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~--~~Fd~i--------v~~e~----v~~~KP 260 (368)
.. ....++||+.++|+.|+++|++++|+|++....++.+++.+|+. .+|... +.+.+ ....++
T Consensus 79 ~~---~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 155 (224)
T PLN02954 79 EK---RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGG 155 (224)
T ss_pred HH---ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCcc
Confidence 22 12468999999999999999999999999999999999999986 356431 11111 123567
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-c-ccCCCcEEEcCchhhhH
Q 043738 261 DPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-Y-ELGAADLVVRHLDELSV 326 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-~-~~~~ad~vv~sl~eL~~ 326 (368)
|++++..+++++|. ++|++|||+.+|+.+|+++|+.++...++... . ....+++++.++.+|..
T Consensus 156 K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 156 KAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred HHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 88999999999885 68999999999999999999887665443322 1 12348999999999854
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=170.18 Aligned_cols=190 Identities=15% Similarity=0.188 Sum_probs=128.9
Q ss_pred CCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH-hC-CCHHHHHHHHHh-cCCCHHHHHHHHHHHH
Q 043738 115 GCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI-EG-MKNEQAISEVLC-WSRDPAELRRMASRME 191 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~-~g-~~~~~~~~~~l~-~~~~~~~~~~l~~~~~ 191 (368)
.+++++++|||||||+++. .+.++++.+|............ .| ..........+. +... ..
T Consensus 11 ~~~~k~iiFD~DGTL~~~~------~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~ 74 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE------TIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGL----------PV 74 (219)
T ss_pred hccCCEEEEeCcccCCCch------HHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCC----------CH
Confidence 4457899999999999853 4667777777653333222222 12 122222222111 0000 01
Q ss_pred HHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEE-------eCC---CCCCCCCC
Q 043738 192 EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIV-------AAE---DVHRGKPD 261 (368)
Q Consensus 192 ~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv-------~~e---~v~~~KP~ 261 (368)
+.+..... ...++||+.++|+.|+++|++++++||+....+...++++|+..+|+..+ ++. ....++|+
T Consensus 75 ~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 153 (219)
T TIGR00338 75 ELLKEVRE-NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYK 153 (219)
T ss_pred HHHHHHHh-cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCccc
Confidence 12222222 25789999999999999999999999999999999999999988885322 221 12235678
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCc--hhh
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHL--DEL 324 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl--~eL 324 (368)
+.+|..+++++++++++|++|||+.+|+++|+.+|+.+++ ++. . .....|++++.+. .++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~-~-~~~~~a~~~i~~~~~~~~ 215 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAK-P-KLQQKADICINKKDLTDI 215 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCC-H-HHHHhchhccCCCCHHHH
Confidence 9999999999999999999999999999999999998644 322 1 1223588988744 444
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-20 Score=178.53 Aligned_cols=200 Identities=13% Similarity=0.090 Sum_probs=138.2
Q ss_pred CCCCCCChhhhhcccCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHh-c
Q 043738 100 DNPSLHNPLLRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG--MKNEQAISEVLC-W 176 (368)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~-~ 176 (368)
...++...++......+.+++|+|||||||+. .+++.++++.+|.......+...... ....+.+...+. .
T Consensus 92 ~~~~~d~~~~~~~~~~~~~~LvvfDmDGTLI~------~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l 165 (322)
T PRK11133 92 HELGLDVAPLGKIPHLRTPGLLVMDMDSTAIQ------IECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATL 165 (322)
T ss_pred hhcCCcEEEecCcccccCCCEEEEECCCCCcc------hHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHh
Confidence 34445554554444456689999999999994 25788888888876655444333322 222222221111 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc-------EE
Q 043738 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT-------AI 249 (368)
Q Consensus 177 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd-------~i 249 (368)
.... .+.+.... ...+++||+.++|+.|++.|++++|+|+++...++.+++++|+...+. ..
T Consensus 166 ~g~~----------~~il~~v~-~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ 234 (322)
T PRK11133 166 KGAD----------ANILQQVR-ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGK 234 (322)
T ss_pred CCCC----------HHHHHHHH-HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCE
Confidence 1111 11122221 236899999999999999999999999999999999999999875443 22
Q ss_pred EeCC---CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc
Q 043738 250 VAAE---DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 250 v~~e---~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
+++. ++..+|||++.++.+++++|+++++|++|||+.||++|++.+|+.+++ +... .....||++++
T Consensus 235 ltg~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp--~Vk~~Ad~~i~ 304 (322)
T PRK11133 235 LTGNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKP--KVNEQAQVTIR 304 (322)
T ss_pred EEeEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCH--HHHhhCCEEec
Confidence 2222 233578999999999999999999999999999999999999998877 3221 22235999996
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=161.07 Aligned_cols=177 Identities=13% Similarity=0.060 Sum_probs=118.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHH-HHhCCCH-HHHHHHHHhcCCCHHHHHHHH-HHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILR-RIEGMKN-EQAISEVLCWSRDPAELRRMA-SRMEEIY 194 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~-~~~g~~~-~~~~~~~l~~~~~~~~~~~l~-~~~~~~~ 194 (368)
+|+|+|||||||+++.. .|..+...+|.......... ...|... .+...... ..+.... ....+.+
T Consensus 4 ~k~viFD~DGTLid~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 72 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVMS-----SWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDA------SLWKRRSGRLRREEV 72 (201)
T ss_pred ceEEEEeCCCCCcCCcc-----HHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHH------HHHhhcccCCCHHHH
Confidence 78999999999998652 34555555665422222111 2223222 22111110 0000000 0011222
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCC----------CCHHH
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGK----------PDPEM 264 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~K----------P~~~~ 264 (368)
..... ...++||+.++|+.|+++|++++|+|++....++..++++|+..+|+..+..++.+..+ ++.+.
T Consensus 73 ~~~~~-~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~ 151 (201)
T TIGR01491 73 EEIFK-EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEA 151 (201)
T ss_pred HHHHH-hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHH
Confidence 22222 25899999999999999999999999999999999999999988887666554433323 34468
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+..+++++|+++++|++|||+.+|+++|+.+|+.++..++++
T Consensus 152 ~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 152 VERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 899999999999999999999999999999999876644443
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=162.69 Aligned_cols=189 Identities=16% Similarity=0.262 Sum_probs=134.7
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH-----------------hC-CCHHHHHHHHHhcC
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI-----------------EG-MKNEQAISEVLCWS 177 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~-----------------~g-~~~~~~~~~~l~~~ 177 (368)
+++++|+||++|||+..... ....|..+.+.+|+..+........ .| ++..+.+..+....
T Consensus 5 ~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~ 83 (237)
T KOG3085|consen 5 MRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST 83 (237)
T ss_pred cceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence 45899999999999964433 3467889999999985443321110 01 23333333222111
Q ss_pred C---CHHHHHHHHHH-HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC
Q 043738 178 R---DPAELRRMASR-MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE 253 (368)
Q Consensus 178 ~---~~~~~~~l~~~-~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e 253 (368)
. ........... ....|.........+.+++.++++.|+..|+.++++||.+...- ..+..+|+..|||.++.+.
T Consensus 84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~ 162 (237)
T KOG3085|consen 84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESC 162 (237)
T ss_pred hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhh
Confidence 1 11111111111 11222222112346778888999999999999999999875554 8888999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCC
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++..||+|.+|..+++++++.|++|++|||.. ||+++|+++||+++.|.+..
T Consensus 163 e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~ 216 (237)
T KOG3085|consen 163 EVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSI 216 (237)
T ss_pred hhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence 999999999999999999999999999999999 99999999999999988443
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-19 Score=157.65 Aligned_cols=126 Identities=21% Similarity=0.235 Sum_probs=102.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCccccccEEEeC-----CCCCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEYFTAIVAA-----EDVHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~Fd~iv~~-----e~v~~~KP~ 261 (368)
..++||+.++|+.|++.|++++|+||... ..+...++++|+ +|+.++.+ +++...||+
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCC
Confidence 36789999999999999999999999863 234455667776 48877754 346789999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc--CCC--cEEEcCchhhhHHHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL--GAA--DLVVRHLDELSVVDL 329 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~--~~a--d~vv~sl~eL~~~~l 329 (368)
+++|..+++++|+.+++|++|||+.+|+.+|+++|+.+|++..+...... ..+ +++++++.++...+.
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999855432222 235 999999999976553
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=157.85 Aligned_cols=185 Identities=12% Similarity=0.115 Sum_probs=128.6
Q ss_pred ceEEEEeccCccccCc------chHHHHHHHHHHHHhCCCCCHHHHHHHHhCC-CHHHHHH---HHHhcCCCHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDN------PDLEKQAWLTLAQEEGKSPPPAFILRRIEGM-KNEQAIS---EVLCWSRDPAELRRMA 187 (368)
Q Consensus 118 ik~VIFDlDGTLid~~------~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~-~~~~~~~---~~l~~~~~~~~~~~l~ 187 (368)
+++|++|+.||+..-. -.+..+....+++.......... ++...+. ....... ..+........++.+.
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~lq 79 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVEN-LRELGKTPEELILLRKLHAEMDKDRKATPLKTLQ 79 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCHHHHH-HHHhccCCcHHHHHHHHHHHHHcCCCcchHHHHH
Confidence 4789999999998522 12223333344444332222222 2222222 1122222 2233333444455555
Q ss_pred HH-HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CccccccEEEeCCCCCCCCCCHH
Q 043738 188 SR-MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---GIEEYFTAIVAAEDVHRGKPDPE 263 (368)
Q Consensus 188 ~~-~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---gl~~~Fd~iv~~e~v~~~KP~~~ 263 (368)
.. +.+.|... .....++||+.++|+.|+++|++++|+||++...++..+++. ++..+|+.++.. .. ..||+++
T Consensus 80 g~iw~~~Y~~~-~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~-g~KP~p~ 156 (220)
T TIGR01691 80 GLIWRQGYESG-ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TV-GLKTEAQ 156 (220)
T ss_pred HHHHHHHHhcC-CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Cc-ccCCCHH
Confidence 44 66666553 223579999999999999999999999999998888888876 677778877653 23 3699999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
.|..+++++|++|++|+||||+..|+++|+++||.+|++.++.
T Consensus 157 ~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 157 SYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred HHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 9999999999999999999999999999999999999988544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.6e-19 Score=153.92 Aligned_cols=122 Identities=19% Similarity=0.305 Sum_probs=100.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCccccccEEEeC-----------CCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEYFTAIVAA-----------EDV 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~Fd~iv~~-----------e~v 255 (368)
..++||+.++|+.|+++|++++++||.+. ..+...+.++++. |+.++.+ ++.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~ 102 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC 102 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence 47889999999999999999999999874 3344566666666 7776653 244
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeE-EEEcCCCCcccc--CCCcEEEcCchhhh
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPVYEL--GAADLVVRHLDELS 325 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~-I~v~~~~~~~~~--~~ad~vv~sl~eL~ 325 (368)
...||++++|..+++++|+++++|+||||+.+|+++|+++|+.+ +++.++...... ..||++++++.||.
T Consensus 103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 57899999999999999999999999999999999999999998 788865543222 24999999999985
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-19 Score=155.87 Aligned_cols=87 Identities=16% Similarity=0.267 Sum_probs=82.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+ +++|+||++...+...++++|+..+|+.++++++++..||++++|..+++++|++|++|++
T Consensus 89 ~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 578999999998 3899999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHc
Q 043738 282 FGNSNQTVEAAHDA 295 (368)
Q Consensus 282 IGDs~nDl~~A~~a 295 (368)
|||+..|+.+|+++
T Consensus 162 vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 162 VAAHQWDLIGARKF 175 (175)
T ss_pred EecChhhHHHHhcC
Confidence 99999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=153.19 Aligned_cols=127 Identities=13% Similarity=0.184 Sum_probs=102.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH--------HHHHHHHHcCccccccEEE-eCCCCCCCCCCHHHHHHHHHHc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK--------TLETAIDSIGIEEYFTAIV-AAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~--------~~~~~l~~~gl~~~Fd~iv-~~e~v~~~KP~~~~~~~~le~l 272 (368)
..++||+.++|+.|++.|++++++||.... .....++.+|+..+|..+. +++++...||++++|..+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l 106 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKH 106 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHc
Confidence 467899999999999999999999998631 2334466777766554433 4566778999999999999999
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-------ccc--CCCcEEEcCchhhhHHH
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-------YEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-------~~~--~~ad~vv~sl~eL~~~~ 328 (368)
+++|++|++|||+.+|+.+|+++|+.+|++.++... ..+ ..++++++++.|+...+
T Consensus 107 ~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 107 GLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 999999999999999999999999999999865422 112 24899999999996643
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.1e-19 Score=149.90 Aligned_cols=103 Identities=18% Similarity=0.273 Sum_probs=86.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCcccc--ccEEE-eCCCCCCCCCCHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEY--FTAIV-AAEDVHRGKPDPEM 264 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~--Fd~iv-~~e~v~~~KP~~~~ 264 (368)
.++||+.++|+.|+++|++++++||... ..+...++++|+... |..++ +++..+..||++++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 6789999999999999999999999863 456677888888621 21111 13455667999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
|..+++++++++++|++|||+..|+++|+++|+++|+++.+
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 99999999999999999999999999999999999998753
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=7e-18 Score=153.57 Aligned_cols=195 Identities=17% Similarity=0.180 Sum_probs=126.9
Q ss_pred eEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHh-C-CCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE-G-MKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~-g-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
++|+|||||||+++... + .+++.++. .....+...+. | +...+.+...+.+.... ..+.+.+
T Consensus 4 ~~vifDfDgTi~~~d~~-----~-~~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~---------~~~~~~~ 67 (219)
T PRK09552 4 IQIFCDFDGTITNNDNI-----I-AIMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSN---------LKEEIIQ 67 (219)
T ss_pred cEEEEcCCCCCCcchhh-----H-HHHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCC---------chHHHHH
Confidence 48999999999986531 1 24444442 12222222221 1 23344444443321111 0111222
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc--cc--cEEEeCCCCCCCCCCHHH--------
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE--YF--TAIVAAEDVHRGKPDPEM-------- 264 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~--~F--d~iv~~e~v~~~KP~~~~-------- 264 (368)
.+.....++||+.++|+.|+++|++++|+|++....+..+++++ +.. ++ +..+.++.....||++..
T Consensus 68 ~~~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~ 146 (219)
T PRK09552 68 FLLETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCG 146 (219)
T ss_pred HHHhCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCC
Confidence 22233689999999999999999999999999999999999987 643 23 344556666666776653
Q ss_pred --HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC--CCccccCCCcEEEcCchhhhHHHHhccc
Q 043738 265 --FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK--HPVYELGAADLVVRHLDELSVVDLKNLA 333 (368)
Q Consensus 265 --~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~--~~~~~~~~ad~vv~sl~eL~~~~l~~L~ 333 (368)
...++++++..+.+|++|||+.+|+.+|+++|+.++ .+. ........+.+.+.++.|+... ++.+.
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f~ei~~~-l~~~~ 216 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETFHDVQTE-LKHLL 216 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCHHHHHHH-HHHHh
Confidence 457889999999999999999999999999999433 221 1111233478888999999766 44443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-17 Score=149.25 Aligned_cols=194 Identities=17% Similarity=0.159 Sum_probs=122.9
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC-CCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG-MKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
+++|+|||||||++ +.|..+++++|.+... . ...+ ......+...+.. +. ......+.+..
T Consensus 1 ~~~v~FD~DGTL~~-------~~~~~~~~~~g~~~~~-~---~~~~~~~~~~~~~~~~~~------l~-~~~~~~~~i~~ 62 (205)
T PRK13582 1 MEIVCLDLEGVLVP-------EIWIAFAEKTGIPELR-A---TTRDIPDYDVLMKQRLDI------LD-EHGLGLADIQE 62 (205)
T ss_pred CeEEEEeCCCCChh-------hHHHHHHHHcCChHHH-H---HhcCCCCHHHHHHHHHHH------HH-HcCCCHHHHHH
Confidence 47899999999993 2566777788864211 1 1111 1111111111100 00 00001111222
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC-C---CCCCCCCHHHHHHHHHHc
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE-D---VHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e-~---v~~~KP~~~~~~~~le~l 272 (368)
.+. ...++||+.++|+.|++. ++++++|++....++..++++|+..+|+..+... + .+..++++.....+++++
T Consensus 63 ~~~-~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~ 140 (205)
T PRK13582 63 VIA-TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKAL 140 (205)
T ss_pred HHH-hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHH
Confidence 222 257899999999999999 9999999999999999999999998886544322 1 111223344556666777
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcE-EEcCchhhhHHHHhccc
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADL-VVRHLDELSVVDLKNLA 333 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~-vv~sl~eL~~~~l~~L~ 333 (368)
+..+++|++|||+.+|+++++++|+.+. +........ ..+++ +++++.+|...+.+.++
T Consensus 141 ~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~~~~~-~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 141 KSLGYRVIAAGDSYNDTTMLGEADAGIL-FRPPANVIA-EFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred HHhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCHHHHH-hCCcccccCCHHHHHHHHHHHHh
Confidence 7778999999999999999999998654 333221111 23454 89999999766655543
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-17 Score=150.23 Aligned_cols=150 Identities=11% Similarity=0.073 Sum_probs=110.4
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQ 195 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (368)
++.-+|+|||||||+|+.+.+ .+|........++.+.|....+. |.
T Consensus 61 ~~p~aViFDlDgTLlDSs~~~----------~~G~~~~s~~~~~~l~g~~~w~~------------------------~~ 106 (237)
T TIGR01672 61 RPPIAVSFDIDDTVLFSSPGF----------WRGKKTFSPGSEDYLKNQVFWEK------------------------VN 106 (237)
T ss_pred CCCeEEEEeCCCccccCcHHH----------hCCcccCCHHHhhhhcChHHHHH------------------------HH
Confidence 334489999999999987533 15554322221333333322222 22
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCC----ChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTH----PRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~----~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
........+.+++.++|+.++++|++++++||. ....++.+++++|+..+|+.+++++.....||++. .++++
T Consensus 107 ~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~ 183 (237)
T TIGR01672 107 NGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQD 183 (237)
T ss_pred HhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHh
Confidence 222223466677999999999999999999998 66788899999999999999999988777787765 35566
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++ +++|||+.+|+.+|+++|+.+|.+.++.
T Consensus 184 ~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~ 214 (237)
T TIGR01672 184 KNI----RIHYGDSDNDITAAKEAGARGIRILRAS 214 (237)
T ss_pred CCC----eEEEeCCHHHHHHHHHCCCCEEEEEecC
Confidence 665 7999999999999999999999998443
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-18 Score=150.86 Aligned_cols=107 Identities=10% Similarity=0.079 Sum_probs=97.3
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCC-ChHHHHHHHHHcCcc---------ccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTH-PRKTLETAIDSIGIE---------EYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~-~~~~~~~~l~~~gl~---------~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
...++||+.++|+.|+++|++++++||. ....++..++.+++. .+|+.++++++....||.+.+++.+.+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 4689999999999999999999999998 888889999999998 999999999887777777788787777
Q ss_pred Hc--CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 271 LL--KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 271 ~l--gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
.+ |+.|++|+||||+..|+++|+++|+.++++.++..
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~ 161 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMD 161 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCcc
Confidence 77 89999999999999999999999999999987654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.5e-17 Score=136.25 Aligned_cols=97 Identities=21% Similarity=0.347 Sum_probs=86.4
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC--------hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc-C
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP--------RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL-K 273 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~--------~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l-g 273 (368)
.++||+.++|+.|++.|++++++||+. ...+...++++++. |+.++.+. ...||++++|..+++++ +
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~~~ 100 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HCRKPKPGMFLEALKRFNE 100 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CCCCCChHHHHHHHHHcCC
Confidence 678999999999999999999999998 77888999999986 44444444 56799999999999999 5
Q ss_pred CCCCcEEEEcC-CHhhHHHHHHcCCeEEEEc
Q 043738 274 FIPERCIVFGN-SNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 274 i~p~~~l~IGD-s~nDl~~A~~aG~~~I~v~ 303 (368)
++|++|++||| +.+|+.+|+++|+.+|+++
T Consensus 101 ~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 101 IDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 99999999999 6899999999999999975
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-17 Score=142.78 Aligned_cols=103 Identities=14% Similarity=0.203 Sum_probs=92.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC---------------hHHHHHHHHHcCccccccEEE-e----CCCCCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP---------------RKTLETAIDSIGIEEYFTAIV-A----AEDVHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~---------------~~~~~~~l~~~gl~~~Fd~iv-~----~e~v~~~KP~ 261 (368)
..++||+.++|+.|+++|++++++||.. ...+...++++|+. |+.++ + +++....||+
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~ 105 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPK 105 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence 4789999999999999999999999963 45677888999997 87665 4 4778889999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++|..+++++++++++|+||||+.+|+++|+++||+++++..+.
T Consensus 106 ~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 106 IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 999999999999999999999999999999999999999998664
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.2e-17 Score=133.24 Aligned_cols=102 Identities=27% Similarity=0.447 Sum_probs=93.9
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCC----------------CCCHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRG----------------KPDPEM 264 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~----------------KP~~~~ 264 (368)
...+++++.++|+.|+++|++++++|++....++..++.+++..+|+.+++.+..... ||++..
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDK 101 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHH
Confidence 3689999999999999999999999999999999999999998889988887765444 999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
+..++++++.+++++++|||+.+|+++++.+|+.++++
T Consensus 102 ~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 102 LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 99999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-16 Score=140.03 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=81.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC--------------------CCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED--------------------VHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~--------------------v~~~KP~ 261 (368)
..++||+.++|+.|+++|++++++|++....++..++++|+..+|+.+++++. ...+.+|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 58899999999999999999999999999999999999999999999987543 2234456
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCe
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
+++++.+.++. +++++||||+.+|+.+|+++++-
T Consensus 151 ~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 151 GKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred HHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 88888887765 79999999999999999999753
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.8e-16 Score=139.96 Aligned_cols=170 Identities=17% Similarity=0.203 Sum_probs=119.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCH--HHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKN--EQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~--~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
..++++|||||||++ ...+..+....|..........+...... ....... +..+...-.+..
T Consensus 4 ~~~L~vFD~D~TLi~------~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~---------v~~l~g~~~~~v 68 (212)
T COG0560 4 MKKLAVFDLDGTLIN------AELIDELARGAGVGEEVLAITERAMRGELDFEESLRLR---------VALLKGLPVEVL 68 (212)
T ss_pred ccceEEEecccchhh------HHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHH---------HHHhCCCCHHHH
Confidence 357999999999997 25677777777776544444333322221 1111111 111111111112
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC----------CCCCCCCHHH
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED----------VHRGKPDPEM 264 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~----------v~~~KP~~~~ 264 (368)
.+.......++||+.++++.+++.|++++|+|+++...++.+.+.+|++..+...+..++ ...++-|...
T Consensus 69 ~~~~~~~~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~ 148 (212)
T COG0560 69 EEVREEFLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKA 148 (212)
T ss_pred HHHHHhcCcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHH
Confidence 222222168999999999999999999999999999999999999999987754443332 1233456888
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
+..+++++|+++++++++|||.||+.|...+|.+.+.
T Consensus 149 l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 149 LRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred HHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 9999999999999999999999999999999987555
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.7e-16 Score=139.67 Aligned_cols=190 Identities=16% Similarity=0.169 Sum_probs=120.4
Q ss_pred EEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHh--CCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 043738 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE--GMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQ 198 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~ 198 (368)
|+||+||||++.. .+..+++.++. .....+...+. .++..+.+...+.+..... . +.+.+.+
T Consensus 2 ~~fDFDgTit~~d------~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~-~--------~~~~~~~ 65 (214)
T TIGR03333 2 IICDFDGTITNND------NIISIMKQFAP-PEWEALKDGVLSKTLSIQEGVGRMFGLLPSSL-K--------EEITSFV 65 (214)
T ss_pred EEeccCCCCCcch------hHHHHHHHhCc-HHHHHHHHHHHcCCccHHHHHHHHHhhCCCch-H--------HHHHHHH
Confidence 7999999999744 22333333322 11222222221 2334555555443322221 1 1111211
Q ss_pred CCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc---cEEEeCCCCCCCCCCHHHH----------
Q 043738 199 GGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF---TAIVAAEDVHRGKPDPEMF---------- 265 (368)
Q Consensus 199 ~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F---d~iv~~e~v~~~KP~~~~~---------- 265 (368)
.....++||+.++|+.|+++|++++|+|++....++.++++++...++ +.++.++.....+|++..+
T Consensus 66 ~~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 66 LETAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred HhcCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 123689999999999999999999999999999999999987544443 3444555555567766554
Q ss_pred HHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC--CccccCCCcEEEcCchhhhHHH
Q 043738 266 VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH--PVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 266 ~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~--~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
..++++++..+++|+||||+.+|+.+|+.+|+ +++.+.- .......+.+...++.|+...+
T Consensus 146 ~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 146 PSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred HHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 47777777788999999999999999999998 4443311 0122233566678888886654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.7e-15 Score=132.77 Aligned_cols=186 Identities=18% Similarity=0.199 Sum_probs=117.1
Q ss_pred eEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCC-CHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGM-KNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
++++|||||||++. .|..+....|... .... ..+. ...+....-+. +.+....-.+.+.+.
T Consensus 2 ~la~FDlD~TLi~~-------~w~~~~~~~g~~~--~~~~--~~~~~~~~~~~~~r~~-------ll~~~g~~~~~i~~~ 63 (203)
T TIGR02137 2 EIACLDLEGVLVPE-------IWIAFAEKTGIDA--LKAT--TRDIPDYDVLMKQRLR-------ILDEHGLKLGDIQEV 63 (203)
T ss_pred eEEEEeCCcccHHH-------HHHHHHHHcCCcH--HHHH--hcCCcCHHHHHHHHHH-------HHHHCCCCHHHHHHH
Confidence 56999999999952 5888888888532 1111 1111 11211111100 000001111222232
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccE--------EEeCCCCCCCCCCHHHHHHHH
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA--------IVAAEDVHRGKPDPEMFVYAA 269 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~--------iv~~e~v~~~KP~~~~~~~~l 269 (368)
+. ...++||+.++|+.+++.+ +++|+|++....+..+++++|+..+|.. .+++... ..++.+..+...+
T Consensus 64 ~~-~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~l 140 (203)
T TIGR02137 64 IA-TLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIAF 140 (203)
T ss_pred HH-hCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHHH
Confidence 32 2588999999999999975 9999999999999999999999988862 2333222 2344445455555
Q ss_pred HHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCc-EEEcCchhhhHHHHh
Q 043738 270 QLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAAD-LVVRHLDELSVVDLK 330 (368)
Q Consensus 270 e~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad-~vv~sl~eL~~~~l~ 330 (368)
++.+. +|++||||.||+.|++.+|+++++.....-... .+| -++.+++||...+.+
T Consensus 141 ~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~--~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 141 KSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIRE--FPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred HhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHh--CCCCCcccCHHHHHHHHHH
Confidence 66553 799999999999999999999887543322221 222 356788888665543
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.9e-16 Score=134.03 Aligned_cols=97 Identities=11% Similarity=0.147 Sum_probs=85.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH------------HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK------------TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~------------~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.++||+.++|+.|++.|++++|+||.+.. .+...++++|+. ++.++++++....||++++|.++++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCCCCCccHHHHHHHH
Confidence 46899999999999999999999998653 467788999985 3667777766678999999999999
Q ss_pred HcC--CCCCcEEEEcCCH--------hhHHHHHHcCCeEEE
Q 043738 271 LLK--FIPERCIVFGNSN--------QTVEAAHDARMKCVA 301 (368)
Q Consensus 271 ~lg--i~p~~~l~IGDs~--------nDl~~A~~aG~~~I~ 301 (368)
++| +++++|++|||+. +|+++|+++|+.+++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999 9999999999986 699999999999865
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=6e-15 Score=129.55 Aligned_cols=193 Identities=16% Similarity=0.220 Sum_probs=129.5
Q ss_pred CceEEEEeccCccccCcchHHHHH---HHH-HHHHhCCCCCHHHHHHH----HhCCCHHHHHHHHHhcCCCHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQA---WLT-LAQEEGKSPPPAFILRR----IEGMKNEQAISEVLCWSRDPAELRRMAS 188 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a---~~~-~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~l~~~~~~~~~~~l~~ 188 (368)
++++++||+|.||+.-...+...+ +.. +..++|+..+....+.. ..|....... ......+..+..
T Consensus 14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~--~~~~~~d~deY~---- 87 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLK--AVGYIFDADEYH---- 87 (244)
T ss_pred cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHH--HhcccCCHHHHH----
Confidence 589999999999997655554333 223 33456766543332111 1111111100 001111111111
Q ss_pred HHHHHHHHHHC-CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC------CCCCC
Q 043738 189 RMEEIYQALQG-GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH------RGKPD 261 (368)
Q Consensus 189 ~~~~~~~~~~~-~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~------~~KP~ 261 (368)
+.+...+. ..+.+.+-.+.+|-.|+..+ .++.||+.+.++...++.+|+.+.|+.|++.+-.. .-||.
T Consensus 88 ---~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~ 162 (244)
T KOG3109|consen 88 ---RFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPS 162 (244)
T ss_pred ---HHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCC
Confidence 11111111 11467777889998888764 89999999999999999999999999999876433 46999
Q ss_pred HHHHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 262 PEMFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 262 ~~~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+++|+.+.+..|++ |.+++||+||.++|+.|+++||+++.+...+...+ +|+++.+..+
T Consensus 163 ~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~---~d~~l~~ih~ 222 (244)
T KOG3109|consen 163 EEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKG---VDYALEQIHN 222 (244)
T ss_pred HHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccc---hHHHHHHhhc
Confidence 99999999999998 99999999999999999999999999886554332 4444444333
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.2e-15 Score=129.03 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=79.9
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC------------CCCCCCCCHHHHHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE------------DVHRGKPDPEMFVYA 268 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e------------~v~~~KP~~~~~~~~ 268 (368)
...++||+.++++.++++|++++|+|++....++..++++|+..+|...+..+ ....+..|...+..+
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 35789999999999999999999999999999999999999987775443321 122345567889999
Q ss_pred HHHcCCCCCcEEEEcCCHhhHHHHHHc
Q 043738 269 AQLLKFIPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 269 le~lgi~p~~~l~IGDs~nDl~~A~~a 295 (368)
++.+++++++|++|||+.+|+.|++.+
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 999999999999999999999999764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.5e-15 Score=132.39 Aligned_cols=100 Identities=10% Similarity=0.081 Sum_probs=85.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccE-EE-------eCC---CCCCCCCCHHHHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA-IV-------AAE---DVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~-iv-------~~e---~v~~~KP~~~~~~~~le 270 (368)
..++|++.++++.++++|++++|+|++....++..++++|+..+|.. +. ++. ....+++|...++.+++
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999887754 22 221 12345677888999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
+.++++++|++||||.+|+++++.+|..++.
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred HcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 9999999999999999999999999987654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.8e-15 Score=141.05 Aligned_cols=124 Identities=19% Similarity=0.215 Sum_probs=100.9
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC---CCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV---HRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v---~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
++++.+.++.|++.+++++++||.+..........+|+..+|+.+.++... ..+||++.+|..++++++++|++|++
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~ 201 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVM 201 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEE
Confidence 567788899999889999999998777666666677888888876655432 24899999999999999999999999
Q ss_pred EcCCH-hhHHHHHHcCCeEEEEcCCC-Ccc--c--cCCCcEEEcCchhhhHHH
Q 043738 282 FGNSN-QTVEAAHDARMKCVAVASKH-PVY--E--LGAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~-nDl~~A~~aG~~~I~v~~~~-~~~--~--~~~ad~vv~sl~eL~~~~ 328 (368)
|||+. +|+.+|+++|+.+++|.++. ... + ...+|++++++.++...+
T Consensus 202 vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 202 IGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 99996 99999999999999998653 221 1 134899999999997543
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-15 Score=141.84 Aligned_cols=120 Identities=21% Similarity=0.213 Sum_probs=92.9
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHH-HHHHHcCccccccEEE---eCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLE-TAIDSIGIEEYFTAIV---AAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~-~~l~~~gl~~~Fd~iv---~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++++.++++.|++.|+ ++++||.+..... ..+...|+..+|+.+. +.+....+||++.+|..+++++|++|++|
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence 36789999999998887 7899997654431 2233456666666543 34455678999999999999999999999
Q ss_pred EEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc----------CCCcEEEcCchhh
Q 043738 280 IVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL----------GAADLVVRHLDEL 324 (368)
Q Consensus 280 l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~----------~~ad~vv~sl~eL 324 (368)
+||||+. +|+.+|+++||++|+|.++.. ..++ ..+|++++++.+|
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999995 999999999999999985533 2222 2489999998875
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.4e-15 Score=131.70 Aligned_cols=90 Identities=27% Similarity=0.395 Sum_probs=80.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.+++|++.++|+.|++.|++++++||.....+....+.+|+. +.++.+... +||.+.+|..+++.+++++.+|+|
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI--GKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc--ccccchhHHHHHHHHhcCCCEEEE
Confidence 478899999999999999999999999999999999999993 433443322 799999999999999999999999
Q ss_pred EcCCHhhHHHHHHcC
Q 043738 282 FGNSNQTVEAAHDAR 296 (368)
Q Consensus 282 IGDs~nDl~~A~~aG 296 (368)
|||+.||+.|+++||
T Consensus 201 vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 201 VGDGVNDAPALKAAG 215 (215)
T ss_dssp EESSGGHHHHHHHSS
T ss_pred EccCHHHHHHHHhCc
Confidence 999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=120.65 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=79.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCC-ChHHHHHHHHHcC-------ccccccEEEeCCCCCCCCCCHHHHHHHHHHcC-
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTH-PRKTLETAIDSIG-------IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK- 273 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~-~~~~~~~~l~~~g-------l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg- 273 (368)
.++||+.++|+.|+++|++++++||+ ....+...++.++ +..+|+.++++++ +|++++|..+++++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg~ 104 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLNG 104 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhcC
Confidence 56789999999999999999999999 8888888899888 8899999888864 488999999999999
Q ss_pred -CCCCcEEEEcCCHhhHHHHHH
Q 043738 274 -FIPERCIVFGNSNQTVEAAHD 294 (368)
Q Consensus 274 -i~p~~~l~IGDs~nDl~~A~~ 294 (368)
+.|++|+||||+..|+...++
T Consensus 105 ~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 105 VLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCCcceEEEECCCHhHHHHHHh
Confidence 999999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.1e-14 Score=135.89 Aligned_cols=101 Identities=16% Similarity=0.224 Sum_probs=88.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCC---------------ChHHHHHHHHHcCccccccEEEe-----CCCCCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTH---------------PRKTLETAIDSIGIEEYFTAIVA-----AEDVHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~---------------~~~~~~~~l~~~gl~~~Fd~iv~-----~e~v~~~KP~ 261 (368)
..++||+.++|+.|++.|++++|+||. ....+...++.+|+. |+.++. +++....||+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~rKP~ 106 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSCRKPK 106 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCCCCCC
Confidence 488999999999999999999999995 244566677888884 776643 3566788999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcC
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~ 304 (368)
+.++..+++++++++++++||||+.+|+++|+++||++|+++.
T Consensus 107 p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 107 TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 9999999999999999999999999999999999999999964
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.5e-14 Score=127.85 Aligned_cols=96 Identities=13% Similarity=0.211 Sum_probs=80.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC----hHHHHHHHHHcCc--cccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP----RKTLETAIDSIGI--EEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~----~~~~~~~l~~~gl--~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
..++||++++|+.++++|++++++||.. ...++.+++.+|+ ..+|+.+++++.. .|+++.. .++++++
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~---~l~~~~i- 186 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQ---WLKKKNI- 186 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHH---HHHhcCC-
Confidence 5788999999999999999999999953 5577778888999 8899999888764 5665543 5556665
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++|||+.+|+.+|+++|+.+|.+.++.
T Consensus 187 ---~I~IGDs~~Di~aA~~AGi~~I~v~~G~ 214 (237)
T PRK11009 187 ---RIFYGDSDNDITAAREAGARGIRILRAA 214 (237)
T ss_pred ---eEEEcCCHHHHHHHHHcCCcEEEEecCC
Confidence 8999999999999999999999998543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.8e-13 Score=121.76 Aligned_cols=177 Identities=10% Similarity=0.047 Sum_probs=114.3
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHH-HHhCCCCCHHHHHHHHhCCCHHHHHHH-H------H---hcCCCHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLA-QEEGKSPPPAFILRRIEGMKNEQAISE-V------L---CWSRDPAELRRM 186 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~-~~~g~~~~~~~~~~~~~g~~~~~~~~~-~------l---~~~~~~~~~~~l 186 (368)
.++++||+||||++ .+... .+..++ +++|+............|......... . + ....+...+..+
T Consensus 6 ~k~~iFD~DGTL~~--~d~~~-~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 82 (211)
T PRK11590 6 RRVVFFDLDGTLHQ--QDMFG-SFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQAL 82 (211)
T ss_pred ceEEEEecCCCCcc--cchHH-HHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHHH
Confidence 47899999999994 33443 444444 778766444333455556543332211 0 0 113356667777
Q ss_pred HHHHHHHHHHHHCCccccCccHHHHH-HHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC--------CCCC
Q 043738 187 ASRMEEIYQALQGGIYRLRTGSKEFV-NILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE--------DVHR 257 (368)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~pg~~elL-~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e--------~v~~ 257 (368)
.+.+.+.|... ..++||+.++| +.+++.|++++|+|+++...++.++..+|+.. .+.+++.+ -.+.
T Consensus 83 ~~~f~~~~~~~----~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g~ 157 (211)
T PRK11590 83 EADFVRWFRDN----VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLTL 157 (211)
T ss_pred HHHHHHHHHHh----CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECCc
Confidence 77776666543 46699999999 57888999999999999999999999988632 23333332 1000
Q ss_pred CCCCHHH-HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcC
Q 043738 258 GKPDPEM-FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 258 ~KP~~~~-~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~ 304 (368)
-...+. ...+.+.++.+...+.+.|||.+|++|..-+|-. ++|+.
T Consensus 158 -~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vnp 203 (211)
T PRK11590 158 -RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHR-WRVTP 203 (211)
T ss_pred -cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCC-EEECc
Confidence 011111 3334444577788899999999999999999965 44443
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.5e-14 Score=135.18 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=96.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-cccEEEeCC-------CCCCCCCCHHHHHHHHHHcC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-YFTAIVAAE-------DVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd~iv~~e-------~v~~~KP~~~~~~~~le~lg 273 (368)
..++|++.++|+.|++.|++++++||.+....+..++++++.. +|+.+++.+ +....||+++++..++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~ 265 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKI 265 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHh
Confidence 4789999999999999999999999999999999999999997 999998887 45568999999999999998
Q ss_pred C-CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 274 F-IPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 274 i-~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
. .+++|++|||+.+|+++|+++||.+|+|.++
T Consensus 266 ~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 266 APKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred ccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 8 6899999999999999999999999999765
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.9e-14 Score=124.80 Aligned_cols=109 Identities=20% Similarity=0.259 Sum_probs=87.1
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
.++.|+++|++++++||.....+...++++|+..+|+. .++++..+..+++++|+.+++|+||||+.+|+.
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g---------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~ 126 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG---------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWP 126 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC---------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 45666788999999999999999999999998877751 356789999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEc------CchhhhHHHHh
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVR------HLDELSVVDLK 330 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~------sl~eL~~~~l~ 330 (368)
+++++|+.++ +.... ......|+++++ .+.|+...++.
T Consensus 127 ~a~~aG~~~~-v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 127 VMEKVGLSVA-VADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHHHCCCeEe-cCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 9999999854 43222 122234899997 56777655543
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.4e-13 Score=118.99 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=84.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC-hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP-RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~-~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++||+.++|+.|++.|++++++||.. ...+..+++.+|+..++ ...||++++|..+++++++++++|++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~~KP~p~~~~~~l~~~~~~~~~~l~ 113 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HAVKPPGCAFRRAHPEMGLTSEQVAV 113 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 667999999999999999999999998 56677777777765321 34699999999999999999999999
Q ss_pred EcCCH-hhHHHHHHcCCeEEEEcCCCCc
Q 043738 282 FGNSN-QTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 282 IGDs~-nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
|||+. .|+.+|+++||.+|++.++...
T Consensus 114 IGDs~~~Di~aA~~aGi~~i~v~~g~~~ 141 (170)
T TIGR01668 114 VGDRLFTDVMGGNRNGSYTILVEPLVHP 141 (170)
T ss_pred ECCcchHHHHHHHHcCCeEEEEccCcCC
Confidence 99998 7999999999999999866543
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.1e-13 Score=116.60 Aligned_cols=161 Identities=16% Similarity=0.191 Sum_probs=115.4
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCC--CHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGM--KNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~--~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
+..++|+||+|.|++. .+.+++++...|.......+.++.++. +.++.+..-+ .+.+.....
T Consensus 14 ~~~~aVcFDvDSTvi~------eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl----------~llqp~~~q 77 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQ------EEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARL----------SLLQPLQVQ 77 (227)
T ss_pred HhcCeEEEecCcchhH------HhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHH----------HHhcccHHH
Confidence 3458999999999995 257888888889887777776666653 3344433322 111111222
Q ss_pred HHH-HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc--ccc--------EEEeC-C---CCCCC
Q 043738 194 YQA-LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE--YFT--------AIVAA-E---DVHRG 258 (368)
Q Consensus 194 ~~~-~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~--~Fd--------~iv~~-e---~v~~~ 258 (368)
... .......+.||+++|++.|+++|.+++++|+++..++....+.+|+.. .|. .-+.+ + -...+
T Consensus 78 v~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsds 157 (227)
T KOG1615|consen 78 VEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDS 157 (227)
T ss_pred HHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccC
Confidence 222 223347899999999999999999999999999999999999999875 221 22222 1 12234
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHH
Q 043738 259 KPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294 (368)
Q Consensus 259 KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~ 294 (368)
.-|++.+..+.+ +.+.+.+++|||+.||++|...
T Consensus 158 ggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p 191 (227)
T KOG1615|consen 158 GGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP 191 (227)
T ss_pred CccHHHHHHHHh--CCChheeEEecCCccccccCCc
Confidence 456888888887 8888999999999999998777
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-13 Score=127.59 Aligned_cols=74 Identities=15% Similarity=0.238 Sum_probs=62.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc----CCCcEEEcCchhhh
Q 043738 252 AEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL----GAADLVVRHLDELS 325 (368)
Q Consensus 252 ~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~----~~ad~vv~sl~eL~ 325 (368)
.+....+||++++|..+++++++++++|++|||+. +|+.+|+++|+.+++|.++.. ..++ ..+|++++++.++.
T Consensus 167 ~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 167 RKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 34455689999999999999999999999999997 899999999999999985543 2332 24899999999883
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.9e-14 Score=129.08 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=64.8
Q ss_pred ccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCc-ccc----CCCcEEEc
Q 043738 246 FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPV-YEL----GAADLVVR 319 (368)
Q Consensus 246 Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~-~~~----~~ad~vv~ 319 (368)
+....+.+.+..+||++++|+.+++.++++++++++|||+. +|+.+|+++|+.+++|.++... .++ ..+|++++
T Consensus 165 i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~ 244 (249)
T TIGR01457 165 LEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVS 244 (249)
T ss_pred HHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeC
Confidence 44445566677889999999999999999999999999997 8999999999999999865432 222 24899999
Q ss_pred Cchhh
Q 043738 320 HLDEL 324 (368)
Q Consensus 320 sl~eL 324 (368)
++.++
T Consensus 245 ~l~~~ 249 (249)
T TIGR01457 245 SLAEW 249 (249)
T ss_pred ChhhC
Confidence 88764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-12 Score=122.15 Aligned_cols=116 Identities=11% Similarity=0.107 Sum_probs=75.0
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCCh-----HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPR-----KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~-----~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
++++.+++..++..+..+.++++... .....+.+.+++...+.....-+....+..|+.+++.+++++|+++++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~ 218 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV 218 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence 45566777777666666666665431 2333444455543211100011223344457889999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchh
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDE 323 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~e 323 (368)
++|||+.||++|++.+|+.+++-++ ..++ ..||+++++.++
T Consensus 219 i~~GD~~NDi~m~~~ag~~vamgna---~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 219 VAFGDNFNDISMLEAAGLGVAMGNA---DDAVKARADLVIGDNTT 260 (272)
T ss_pred EEeCCChhhHHHHHhcCceEEecCc---hHHHHHhCCEEEecCCC
Confidence 9999999999999999986555322 2233 359999977664
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.5e-13 Score=131.63 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=82.6
Q ss_pred HHHhCCCcEEEEcCCChHH-HHHHHHHcCccccccEEEeCCCC---CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hh
Q 043738 214 ILMHYKIPMALVSTHPRKT-LETAIDSIGIEEYFTAIVAAEDV---HRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QT 288 (368)
Q Consensus 214 ~Lk~~Gi~vaivSn~~~~~-~~~~l~~~gl~~~Fd~iv~~e~v---~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nD 288 (368)
.++.++-..+++||.+... ....+..+|...+|+.+.++... ..+||++.+|..++++++++++++++|||+. +|
T Consensus 181 ~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~D 260 (311)
T PLN02645 181 CIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTD 260 (311)
T ss_pred HHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHH
Confidence 3433223577777766433 22333455666677766665442 2479999999999999999999999999997 99
Q ss_pred HHHHHHcCCeEEEEcCCC-Ccccc------CCCcEEEcCchhhhH
Q 043738 289 VEAAHDARMKCVAVASKH-PVYEL------GAADLVVRHLDELSV 326 (368)
Q Consensus 289 l~~A~~aG~~~I~v~~~~-~~~~~------~~ad~vv~sl~eL~~ 326 (368)
+.+|+++|+++|+|.++. ...++ ..+|++++++.+|..
T Consensus 261 i~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 261 ILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 999999999999997543 22221 248999999999864
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.41 E-value=7.2e-12 Score=114.27 Aligned_cols=171 Identities=13% Similarity=0.111 Sum_probs=111.9
Q ss_pred EEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHH--HHHHHHHHH
Q 043738 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMAS--RMEEIYQAL 197 (368)
Q Consensus 120 ~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~--~~~~~~~~~ 197 (368)
+|+||||+||+|.+. -..+.+.++.......+...+......+.+..++. .+.. ...+.+.+.
T Consensus 2 LvvfDFD~TIvd~ds------d~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~---------~L~~~gvt~~~I~~~ 66 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDS------DDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQ---------LLHEQGVTPEDIRDA 66 (234)
T ss_pred EEEEeCCCCccCCcc------HHHHHHhcCCcccHHHHHHhccccchHHHHHHHHH---------HHHHcCCCHHHHHHH
Confidence 689999999998653 23445555554433333233221112222222221 1100 011223333
Q ss_pred HCCccccCccHHHHHHHH--HhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC---------------C-----
Q 043738 198 QGGIYRLRTGSKEFVNIL--MHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED---------------V----- 255 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~L--k~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~---------------v----- 255 (368)
+. .+++.||+.++++.+ +..|+.++|+|++...+++.+|++.|+...|+.|++-.. .
T Consensus 67 l~-~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C 145 (234)
T PF06888_consen 67 LR-SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLC 145 (234)
T ss_pred HH-cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcC
Confidence 33 369999999999999 457999999999999999999999999999988876310 0
Q ss_pred CCCCCCHHHHHHHHHH---cCCCCCcEEEEcCCHhhHHHHHHcCCe-EEEEcCCC
Q 043738 256 HRGKPDPEMFVYAAQL---LKFIPERCIVFGNSNQTVEAAHDARMK-CVAVASKH 306 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~---lgi~p~~~l~IGDs~nDl~~A~~aG~~-~I~v~~~~ 306 (368)
+..--|..++..+++. -|+..++++|||||.||+-++...+-. .++...+.
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~ 200 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGY 200 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCC
Confidence 1112456777777776 478889999999999999999887765 34444443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-12 Score=109.52 Aligned_cols=89 Identities=20% Similarity=0.309 Sum_probs=79.8
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS 285 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs 285 (368)
|.+++-+.+++..|+++.|+||.....+....+++|+. .++ ...||-+..|..+++++++++++|++|||.
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~-----~A~KP~~~~fr~Al~~m~l~~~~vvmVGDq 119 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIY-----RAKKPFGRAFRRALKEMNLPPEEVVMVGDQ 119 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eee-----cccCccHHHHHHHHHHcCCChhHEEEEcch
Confidence 44557788899999999999999999999999999876 333 348999999999999999999999999999
Q ss_pred H-hhHHHHHHcCCeEEEEc
Q 043738 286 N-QTVEAAHDARMKCVAVA 303 (368)
Q Consensus 286 ~-nDl~~A~~aG~~~I~v~ 303 (368)
. .|+-+++.+||.+|.|.
T Consensus 120 L~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 120 LFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred hhhhhhcccccCcEEEEEE
Confidence 9 89999999999999987
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.3e-13 Score=112.57 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=87.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-cccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+.++||+.++|+.|+ .+++++|+|++....++..++++++.. +|+.+++++++...||+ |..+++++|.+|++|+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~i 119 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNVI 119 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhcEE
Confidence 588999999999999 569999999999999999999999865 56999999999999987 9999999999999999
Q ss_pred EEcCCHhhHHHHHHcCCeEE
Q 043738 281 VFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I 300 (368)
+|||+.+|+.++.++|+.+-
T Consensus 120 ~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 120 IIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred EEECCHHHhhcCccCEEEec
Confidence 99999999999999997543
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.8e-12 Score=112.94 Aligned_cols=99 Identities=13% Similarity=0.164 Sum_probs=85.1
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
-++.|++.|++++|+||.....++..++++|+..+|+.+ ||+++.+..+++++++++++|++|||+.||+.
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~---------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~ 112 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI---------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLS 112 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC---------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHH
Confidence 466778899999999999999999999999999888742 78999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
|++.+|+++++-+..... ...|++++.+
T Consensus 113 ~~~~ag~~~am~nA~~~l--k~~A~~I~~~ 140 (169)
T TIGR02726 113 MMKRVGLAVAVGDAVADV--KEAAAYVTTA 140 (169)
T ss_pred HHHHCCCeEECcCchHHH--HHhCCEEcCC
Confidence 999999987775544322 2348888764
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.9e-11 Score=105.50 Aligned_cols=121 Identities=21% Similarity=0.261 Sum_probs=94.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC---------------hHHHHHHHHHcCccccccEEEeCC-----CCCCCCCCH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP---------------RKTLETAIDSIGIEEYFTAIVAAE-----DVHRGKPDP 262 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~---------------~~~~~~~l~~~gl~~~Fd~iv~~e-----~v~~~KP~~ 262 (368)
.+.||+.+.+..+++.|++++++||.+ ...+...++..|. .|+.++.+- ...+.||++
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~ 108 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKP 108 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCCh
Confidence 667899999999999999999999942 2233444555565 378777653 246789999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccC--CCcEEEcCchhhh
Q 043738 263 EMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELG--AADLVVRHLDELS 325 (368)
Q Consensus 263 ~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~--~ad~vv~sl~eL~ 325 (368)
.++..+++++++++++.++|||...|+++|.++|++.+.+..+....... .++.+.+++.++.
T Consensus 109 gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 109 GMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred HHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 99999999999999999999999999999999999977766443332222 3677888888776
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-11 Score=114.66 Aligned_cols=95 Identities=18% Similarity=0.284 Sum_probs=82.6
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEE------EeCCCCCCCCCCH---------HHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAI------VAAEDVHRGKPDP---------EMF 265 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~i------v~~e~v~~~KP~~---------~~~ 265 (368)
.+.+.||+.+|++.|+++|++++|+|++....++..++++|+...+..+ +..+.+..++|.| .++
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 4799999999999999999999999999999999999999987666666 4455555667666 667
Q ss_pred HHHHHHcC--CCCCcEEEEcCCHhhHHHHHHc
Q 043738 266 VYAAQLLK--FIPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 266 ~~~le~lg--i~p~~~l~IGDs~nDl~~A~~a 295 (368)
..++++++ ..+++|++||||.+|+.||..+
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 78899998 8999999999999999998776
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.7e-12 Score=107.28 Aligned_cols=101 Identities=21% Similarity=0.285 Sum_probs=86.0
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
.|+.|+++|++++|+||.+...+...++++|+..+|+. .+|+++.+..+++++|+++++|++|||+.||+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 78899999999999999999999999999999887753 268899999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcCch
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
|++.+|+. +++...... ....|++++.+..
T Consensus 107 ~~~~ag~~-~~v~~~~~~-~~~~a~~i~~~~~ 136 (154)
T TIGR01670 107 VMEKVGLS-VAVADAHPL-LIPRADYVTRIAG 136 (154)
T ss_pred HHHHCCCe-EecCCcCHH-HHHhCCEEecCCC
Confidence 99999997 565544332 2234888887664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.3e-11 Score=118.06 Aligned_cols=98 Identities=11% Similarity=0.155 Sum_probs=81.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.+++||+.++++.++++|++++++|+++...++..++++|+ ||.++++++....||+++. ..+.+.++ .+++++
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~y 144 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFDY 144 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHH-HHHHHHhC--ccCeeE
Confidence 46789999999999999999999999999999999999987 9999999887666665543 23445555 356899
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+||+.+|+++++.+| +.+.|+...
T Consensus 145 vGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 145 AGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred ecCCHHHHHHHHhCC-CeEEECCCH
Confidence 999999999999999 667777443
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-11 Score=92.48 Aligned_cols=68 Identities=34% Similarity=0.493 Sum_probs=60.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-HhhHHHHHHcCCeEEEEcCCCCcc-cc----CCCcEEEcCchhh
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNS-NQTVEAAHDARMKCVAVASKHPVY-EL----GAADLVVRHLDEL 324 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs-~nDl~~A~~aG~~~I~v~~~~~~~-~~----~~ad~vv~sl~eL 324 (368)
.+||++.+|..+++++++++++|++|||+ .+|+.+|+++|+.+|+|..+.... .. ..+|++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 58999999999999999999999999999 799999999999999999655432 22 3599999999885
|
... |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.6e-11 Score=122.71 Aligned_cols=93 Identities=13% Similarity=0.186 Sum_probs=82.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCCh------------HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPR------------KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~------------~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.++||+.+.|+.|++.|++++|+||... ..+..+++++|+. |+.+++.+.....||++.++.++++
T Consensus 197 ~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 197 IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 3579999999999999999999999765 3577888899986 8988888877888999999999999
Q ss_pred HcC----CCCCcEEEEcCCHhhHHHHHHcCC
Q 043738 271 LLK----FIPERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 271 ~lg----i~p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
+++ +++++++||||...|+.++..+|.
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 985 899999999999999888877775
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=3e-11 Score=116.25 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=82.9
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH----cCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS----IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~----~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
+++|+.++|+.|++.|+.++|+|+.....+...+++ +++..+|+.+... .||+++.+..+++++|+.++++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~~ 106 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDSF 106 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCcE
Confidence 467889999999999999999999999999999999 8999999988665 5899999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCe
Q 043738 280 IVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~ 298 (368)
+||||+..|+.++++++-.
T Consensus 107 vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 107 LFIDDNPAERANVKITLPV 125 (320)
T ss_pred EEECCCHHHHHHHHHHCCC
Confidence 9999999999999997653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4e-11 Score=109.53 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=68.5
Q ss_pred EEEEcCCChHHHHHHHHHcCccccccEEE---eCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCe
Q 043738 222 MALVSTHPRKTLETAIDSIGIEEYFTAIV---AAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 222 vaivSn~~~~~~~~~l~~~gl~~~Fd~iv---~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
+++.++.....+...+++++.. +..+. ..+-...+..|...+..+++++|++++++++|||+.||++|++.+|+.
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~ 195 (230)
T PRK01158 118 VALRRTVPVEEVRELLEELGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG 195 (230)
T ss_pred eeecccccHHHHHHHHHHcCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce
Confidence 3445555555666666666532 22221 123345667789999999999999999999999999999999999998
Q ss_pred EEEEcCCCCccccCCCcEEEcCchh
Q 043738 299 CVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 299 ~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+++-+.... -...|++++.+.++
T Consensus 196 vam~Na~~~--vk~~a~~v~~~n~~ 218 (230)
T PRK01158 196 VAVANADEE--LKEAADYVTEKSYG 218 (230)
T ss_pred EEecCccHH--HHHhcceEecCCCc
Confidence 766443322 22358999977654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.1e-10 Score=102.69 Aligned_cols=121 Identities=12% Similarity=0.037 Sum_probs=82.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHH-HHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC-C
Q 043738 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVN-ILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE-D 254 (368)
Q Consensus 177 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~-~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e-~ 254 (368)
..+...+..+.+.+.+.+.. ...++||+.++|+ .++++|++++|+|+++...++.+.+..++... +.+++.+ +
T Consensus 72 g~~~~~l~~~~~~f~~~~~~----~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le 146 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD----KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIE 146 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH----hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeE
Confidence 55667777777777666644 1367999999996 78889999999999999999999988665332 2333332 1
Q ss_pred CCC-CC-----CC-HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 255 VHR-GK-----PD-PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 255 v~~-~K-----P~-~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
+.. ++ .. .+=...+.+.++.+.+.+.+.|||.+|++|...+|-. ++|+
T Consensus 147 ~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vn 201 (210)
T TIGR01545 147 RGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHR-WRVS 201 (210)
T ss_pred EeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCc-EEEC
Confidence 100 10 00 1113334444566777889999999999999999976 4444
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-09 Score=93.17 Aligned_cols=102 Identities=9% Similarity=0.104 Sum_probs=87.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
..++|++.+.|++-++.|++++|.|.++...++-.+.+. .+..+|+..+.... + .|....-|..++...|++|.+
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtti-G-~KrE~~SY~kIa~~iGl~p~e 179 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTI-G-KKRESQSYAKIAGDIGLPPAE 179 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccc-c-ccccchhHHHHHHhcCCCchh
Confidence 488999999999999999999999999888887777654 46667777665532 2 466678899999999999999
Q ss_pred EEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 279 CIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
++|+.|..+.+.+|..+||.++.+.+.
T Consensus 180 ilFLSDn~~EL~AA~~vGl~t~l~~R~ 206 (229)
T COG4229 180 ILFLSDNPEELKAAAGVGLATGLAVRP 206 (229)
T ss_pred eEEecCCHHHHHHHHhcchheeeeecC
Confidence 999999999999999999999988743
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=107.91 Aligned_cols=72 Identities=22% Similarity=0.290 Sum_probs=61.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc----CCCcEEEcCchhhhHH
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL----GAADLVVRHLDELSVV 327 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~----~~ad~vv~sl~eL~~~ 327 (368)
..+||.+.+|+.+++.++..+++|++|||+. +||.+|+++||.++.|..+-. ..+. ..++|+++++.++...
T Consensus 187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~ 264 (269)
T COG0647 187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITA 264 (269)
T ss_pred ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhh
Confidence 5689999999999999999999999999999 899999999999999985443 3322 2378999998888543
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.9e-11 Score=111.27 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=69.1
Q ss_pred EEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 222 MALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 222 vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
..+.+......+...++.++....+ ......+....+..|...+..+++++|++++++++|||+.||++|++.+|+.++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va 189 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVA 189 (225)
T ss_pred EEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEE
Confidence 3444444556667777777653111 001122334567788999999999999999999999999999999999999876
Q ss_pred EEcCCCCccccCCCcEEEcCchh
Q 043738 301 AVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 301 ~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+-+... .-...|++|+.+..+
T Consensus 190 m~Na~~--~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 190 VANAQP--ELKEWADYVTESPYG 210 (225)
T ss_pred cCChhH--HHHHhcCeecCCCCC
Confidence 644322 222348999876554
|
catalyze the same reaction as SPP. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3e-10 Score=100.64 Aligned_cols=103 Identities=12% Similarity=0.133 Sum_probs=84.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH---------------HHHHHHHHcCccccccEEEeCC-----------CCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK---------------TLETAIDSIGIEEYFTAIVAAE-----------DVH 256 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---------------~~~~~l~~~gl~~~Fd~iv~~e-----------~v~ 256 (368)
.+.|.+..++..|++.|++++|||-++.. +++..+++.+...-...+++-. .++
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 45677888999999999999999987653 4667777665554444555422 146
Q ss_pred CCCCCHHH--H--HHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 257 RGKPDPEM--F--VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 257 ~~KP~~~~--~--~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
..||++.+ | +++++++|+.|++|+||+|...++++|+++|+.++.+.+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 78999999 8 9999999999999999999999999999999999998754
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.9e-10 Score=99.70 Aligned_cols=86 Identities=19% Similarity=0.289 Sum_probs=64.2
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cEEEeCCC-------CC---CCCCCHHHHHHH---HH
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TAIVAAED-------VH---RGKPDPEMFVYA---AQ 270 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~iv~~e~-------v~---~~KP~~~~~~~~---le 270 (368)
+++.++|+.+++.|++++|+|+++...++..++.+|+...+ ..-+..+. +. .+ -|...++.+ ..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCG-GKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEES-HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCC-cHHHHHHHHHHHhh
Confidence 55559999999999999999999999999999999987532 21111000 00 01 146677777 44
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHH
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAH 293 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~ 293 (368)
. +.....+++||||.+|+.|++
T Consensus 171 ~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 E-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp H-THTCCEEEEEESSGGGHHHHH
T ss_pred c-CCCCCeEEEEECCHHHHHHhC
Confidence 5 888999999999999999985
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.4e-11 Score=107.80 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=69.3
Q ss_pred cEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 221 PMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 221 ~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
.+++++......+...++..++..++.. ..-+-...+..|..+++.+++++|++++++++|||+.||++|++.+|+.++
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va 187 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA 187 (215)
T ss_pred EEEecCCccHHHHHHHHHhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence 3445566556666777777666543221 111223455667889999999999999999999999999999999999877
Q ss_pred EEcCCCCccccCCCcEEEcCch
Q 043738 301 AVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 301 ~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
+-++... -...|++++++.+
T Consensus 188 m~na~~~--~k~~A~~v~~~~~ 207 (215)
T TIGR01487 188 VANADDQ--LKEIADYVTSNPY 207 (215)
T ss_pred cCCccHH--HHHhCCEEcCCCC
Confidence 7543222 2224899987654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.6e-10 Score=105.02 Aligned_cols=49 Identities=29% Similarity=0.478 Sum_probs=45.5
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCH-hhHHHHHHcCCeEEEEcC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERC-IVFGNSN-QTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~-l~IGDs~-nDl~~A~~aG~~~I~v~~ 304 (368)
..+||++.+|..++++++++++++ ++|||+. +|+.+|+++|+++++|.+
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~ 235 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT 235 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence 467999999999999999998887 9999998 899999999999999864
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.4e-09 Score=101.76 Aligned_cols=68 Identities=13% Similarity=0.070 Sum_probs=54.9
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
-...+-.|..+++.+++++|++++++++|||+.||++|.+.+|.++++-++.. .-...|++|+.+.++
T Consensus 190 I~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~--~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 190 ILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIP--SVKEVAQFVTKSNLE 257 (270)
T ss_pred EeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccH--HHHHhcCeeccCCCc
Confidence 34566777999999999999999999999999999999999999877744332 223359999977653
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.7e-10 Score=97.39 Aligned_cols=102 Identities=17% Similarity=0.232 Sum_probs=74.6
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcC-CChHHHHHHHHHcCcc----------ccccEEEeCCCCCCCCCCHHHHHHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVST-HPRKTLETAIDSIGIE----------EYFTAIVAAEDVHRGKPDPEMFVYAA 269 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn-~~~~~~~~~l~~~gl~----------~~Fd~iv~~e~v~~~KP~~~~~~~~l 269 (368)
.+.++|++.++|+.|+.+|+++++.|- .....++.+|+.+++. ++|+..-... + .|...|+.+.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~----g-sK~~Hf~~i~ 117 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP----G-SKTTHFRRIH 117 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS----S--HHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec----C-chHHHHHHHH
Confidence 479999999999999999999999995 4567899999999999 7887643222 2 5689999999
Q ss_pred HHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 270 QLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 270 e~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
++.|+++++++||+|...+++...+.|+.+|.+..|-.
T Consensus 118 ~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 118 RKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp HHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred HhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 99999999999999999999999999999999987543
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.05 E-value=5e-09 Score=100.89 Aligned_cols=73 Identities=14% Similarity=0.080 Sum_probs=58.5
Q ss_pred CCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC-CCcccc---CCCcEE
Q 043738 256 HRGKPDPEMFVYAAQLL--------KF-----IPERCIVFGNSN-QTVEAAHDARMKCVAVASK-HPVYEL---GAADLV 317 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~l--------gi-----~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~-~~~~~~---~~ad~v 317 (368)
..+||++.+|..+++.+ ++ ++++++||||+. +|+.+|+++||.+|+|..+ ....+. ..++++
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 35999999999998887 43 457999999999 9999999999999999854 222221 238999
Q ss_pred EcCchhhhHHH
Q 043738 318 VRHLDELSVVD 328 (368)
Q Consensus 318 v~sl~eL~~~~ 328 (368)
++++.|+...+
T Consensus 310 v~~l~e~~~~i 320 (321)
T TIGR01456 310 VNDVFDAVTKI 320 (321)
T ss_pred ECCHHHHHHHh
Confidence 99999986544
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.5e-10 Score=103.42 Aligned_cols=90 Identities=14% Similarity=0.256 Sum_probs=61.1
Q ss_pred HHHhCCCcEEEE---cCCChHHHHHHHHHcCcc----ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEcCC
Q 043738 214 ILMHYKIPMALV---STHPRKTLETAIDSIGIE----EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP-ERCIVFGNS 285 (368)
Q Consensus 214 ~Lk~~Gi~vaiv---Sn~~~~~~~~~l~~~gl~----~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p-~~~l~IGDs 285 (368)
.++..++...++ +......+...++..++. .+|..+ +..+ .|...+.++++.+|+++ +++++|||+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei-----~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs 216 (273)
T PRK00192 143 LAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHL-----LGGG-DKGKAVRWLKELYRRQDGVETIALGDS 216 (273)
T ss_pred HHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEEEE-----eCCC-CHHHHHHHHHHHHhccCCceEEEEcCC
Confidence 344445554444 333333444555555543 222222 3334 56789999999999999 999999999
Q ss_pred HhhHHHHHHcCCeEEEEcCCCCcc
Q 043738 286 NQTVEAAHDARMKCVAVASKHPVY 309 (368)
Q Consensus 286 ~nDl~~A~~aG~~~I~v~~~~~~~ 309 (368)
.||++|++.+|+.++|-++.....
T Consensus 217 ~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 217 PNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred hhhHHHHHhCCeeEEeCCCCCCCc
Confidence 999999999999988877554443
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.9e-10 Score=108.01 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=57.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcE--EEcCch-hhhHHHHh
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADL--VVRHLD-ELSVVDLK 330 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~--vv~sl~-eL~~~~l~ 330 (368)
-...+-.|..+++.+++++|++++++++|||+.||++|.+.+|.++++-++..... ..|++ ++.+.+ +-....++
T Consensus 182 I~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK--~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 182 VLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLR--AELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred eecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHH--HhCCCCeecCCCcchHHHHHHH
Confidence 34566677999999999999999999999999999999999998777644332222 23664 665544 34444566
Q ss_pred cccc
Q 043738 331 NLAD 334 (368)
Q Consensus 331 ~L~d 334 (368)
++..
T Consensus 260 ~~~~ 263 (272)
T PRK15126 260 HWLD 263 (272)
T ss_pred HHhc
Confidence 6553
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.4e-09 Score=94.53 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=77.0
Q ss_pred cccCccHHHHHHHHHhCCC-cEEEEcCCChHHHHHHHHHcCccccccEEEeCCC----CC-----------------CCC
Q 043738 202 YRLRTGSKEFVNILMHYKI-PMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED----VH-----------------RGK 259 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi-~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~----v~-----------------~~K 259 (368)
++..||+.++++.+++.|. .+.|+|.+...+++.+++++|+.++|+.|++--. -+ ..-
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNm 162 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNM 162 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhh
Confidence 6899999999999999985 9999999999999999999999999987766310 00 001
Q ss_pred CCHHHHHHHH---HHcCCCCCcEEEEcCCHhhHHHHHHc-CCeEEEEcCCCC
Q 043738 260 PDPEMFVYAA---QLLKFIPERCIVFGNSNQTVEAAHDA-RMKCVAVASKHP 307 (368)
Q Consensus 260 P~~~~~~~~l---e~lgi~p~~~l~IGDs~nDl~~A~~a-G~~~I~v~~~~~ 307 (368)
-|..++..+. -+-|+..++.+||||+.||+-..... +..+++...+.+
T Consensus 163 CKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 163 CKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred hhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 1222333322 23478889999999999997655554 555555554443
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=9e-10 Score=102.96 Aligned_cols=67 Identities=16% Similarity=0.249 Sum_probs=53.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCc--EEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAAD--LVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad--~vv~sl~e 323 (368)
...+-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|-++.....+ .|+ +++.+.+|
T Consensus 185 ~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~--~A~~~~v~~~n~e 253 (266)
T PRK10976 185 MAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKD--LLPELEVIGSNAD 253 (266)
T ss_pred EcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHH--hCCCCeecccCch
Confidence 45566679999999999999999999999999999999999998777544433333 355 77776554
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.2e-10 Score=104.79 Aligned_cols=98 Identities=21% Similarity=0.273 Sum_probs=83.3
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEE--EeCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEE
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAI--VAAEDVHRGKPDPEMFVYAAQLLKFI-PERCIV 281 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~i--v~~e~v~~~KP~~~~~~~~le~lgi~-p~~~l~ 281 (368)
++++.++++.+.++|+++ ++||.+.......+..++...+|..+ ++.+....+||++.+|..++++++.. +++|++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 578899999998889997 88998877776666777777777754 56666668999999999999999975 679999
Q ss_pred EcCC-HhhHHHHHHcCCeEEEEc
Q 043738 282 FGNS-NQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 282 IGDs-~nDl~~A~~aG~~~I~v~ 303 (368)
|||+ .+|+.+|+++|+.+++|.
T Consensus 219 vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 219 VGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred ECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999 599999999999999975
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.4e-09 Score=100.57 Aligned_cols=90 Identities=14% Similarity=0.266 Sum_probs=75.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHH--HHHHHcCccc-cccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLE--TAIDSIGIEE-YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~--~~l~~~gl~~-~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++||+.++|+.|+++|++++++||..+.... ..++++|+.. +|+.|+++.++.. ..+..+++++++.++++
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGII 98 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCceE
Confidence 45689999999999999999999998877665 7889999997 9999999876432 46777778889999999
Q ss_pred EEEcCCHhhHHHHHHcCC
Q 043738 280 IVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~ 297 (368)
++|||+..|++.....|.
T Consensus 99 ~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 99 YLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEeCCcccchhhhcCCCc
Confidence 999999988887766554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.2e-10 Score=105.12 Aligned_cols=67 Identities=24% Similarity=0.207 Sum_probs=53.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
...+.-|..+++.+++++|++++++++|||+.||++|.+.+|.+++|-+.. ......|++++.+.++
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~--~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNAD--EELKELADYVTTSNDE 250 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCC--HHHHhhCCcccCCccc
Confidence 456777899999999999999999999999999999999999987775442 2222347777666554
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.2e-08 Score=93.32 Aligned_cols=84 Identities=12% Similarity=0.170 Sum_probs=67.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCcccc-ccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEY-FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~-Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
..++||+.++|+.++++|++++++||.... .+...++++|+..+ ++.++..++ .++++..+..+.+.+++
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I--- 190 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI--- 190 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE---
Confidence 578999999999999999999999998744 44577888999764 466666643 35667888888887766
Q ss_pred cEEEEcCCHhhHHHH
Q 043738 278 RCIVFGNSNQTVEAA 292 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A 292 (368)
+++|||..+|+..+
T Consensus 191 -vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 -VLLFGDNLLDFDDF 204 (266)
T ss_pred -EEEECCCHHHhhhh
Confidence 89999999999654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.9e-09 Score=100.05 Aligned_cols=70 Identities=4% Similarity=-0.072 Sum_probs=54.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCC---CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcc----ccCCCcEEEcCch
Q 043738 253 EDVHRGKPDPEMFVYAAQLLKF---IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVY----ELGAADLVVRHLD 322 (368)
Q Consensus 253 e~v~~~KP~~~~~~~~le~lgi---~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~----~~~~ad~vv~sl~ 322 (368)
|-...+-.|..+++.+++++|+ +++++++|||+.||++|.+.+|.+++|-+...... ....+++++....
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCC
Confidence 3345677789999999999999 99999999999999999999998877754332211 1224778876655
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.88 E-value=1e-08 Score=105.25 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=55.2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
-+..+-.|..+++.+++++|++++++++|||+.||++|.+.+|.+++|-++... -...||+|+.+.++
T Consensus 501 I~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee--VK~~Ad~VT~sNdE 568 (580)
T PLN02887 501 IVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK--TKAVADVIGVSNDE 568 (580)
T ss_pred EecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH--HHHhCCEEeCCCCc
Confidence 345667779999999999999999999999999999999999998777443332 22359999977654
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.4e-08 Score=89.97 Aligned_cols=67 Identities=19% Similarity=0.159 Sum_probs=53.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
...+-.|..+++.+++.+|++++++++|||+.||++|++.+|+.+++-+. .......|++++.+.++
T Consensus 183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na--~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 183 TAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA--DEELKALADYVTDSNNE 249 (256)
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc--hHHHHHhCCEEecCCCC
Confidence 45566789999999999999999999999999999999999998777432 22223348999887654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.82 E-value=3e-08 Score=90.64 Aligned_cols=65 Identities=22% Similarity=0.277 Sum_probs=52.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
.+--|..+++.+++++|++++++++|||+.||++|.+.+|..+++ +.....-...|++++.+.++
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am--~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM--GNATPELKKAADYITPSNND 247 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE--TTS-HHHHHHSSEEESSGTC
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE--cCCCHHHHHhCCEEecCCCC
Confidence 455668999999999999999999999999999999999988666 33322333349999988887
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-08 Score=104.22 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=86.7
Q ss_pred cccCccHHHHHHHHHhCC-CcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYK-IPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~G-i~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
..++||+.++|+.|+++| ++++++||.+...+...++++|+..+|..+. +++|. .++++++..+.+|+
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~-------p~~K~----~~v~~l~~~~~~v~ 451 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL-------PEDKL----AIVKELQEEGGVVA 451 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC-------HHHHH----HHHHHHHHcCCEEE
Confidence 478999999999999999 9999999999999999999999987776531 12223 34455555678999
Q ss_pred EEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc--CchhhhHHH
Q 043738 281 VFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR--HLDELSVVD 328 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~--sl~eL~~~~ 328 (368)
||||+.||+.+++++|+.+.+ +.........||+++. ++..+...+
T Consensus 452 ~vGDg~nD~~al~~A~vgia~--g~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 452 MVGDGINDAPALAAADVGIAM--GAGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred EEECChhHHHHHhhCCEeEEe--CCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 999999999999999965444 2222222235999997 566765543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.81 E-value=3.9e-08 Score=85.15 Aligned_cols=86 Identities=20% Similarity=0.213 Sum_probs=62.8
Q ss_pred HHHHHHHhCCC--cEEEEcCCC-------hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC-----C
Q 043738 210 EFVNILMHYKI--PMALVSTHP-------RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF-----I 275 (368)
Q Consensus 210 elL~~Lk~~Gi--~vaivSn~~-------~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi-----~ 275 (368)
+.+++|++.+. .++|+||+. ...++..-+.+|+. .+... ..|| ..+..++++++. .
T Consensus 66 ~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~----~kKP--~~~~~i~~~~~~~~~~~~ 135 (168)
T PF09419_consen 66 EWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHR----AKKP--GCFREILKYFKCQKVVTS 135 (168)
T ss_pred HHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeC----CCCC--ccHHHHHHHHhhccCCCC
Confidence 44555555544 599999983 55666777778854 21111 3455 667777777764 4
Q ss_pred CCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC
Q 043738 276 PERCIVFGNSN-QTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 276 p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~ 305 (368)
|+++++|||.. .|+-+|+..|+.+|++..+
T Consensus 136 p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 136 PSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred chhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 99999999999 8999999999999998754
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.1e-08 Score=103.16 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=88.9
Q ss_pred cccCccHHHHHHHHHhCCC-cEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKI-PMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi-~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
..++||+.++++.|+++|+ +++++||.+...++..++++|+..+|..+. +.++ ..++++++...++++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~-------p~~K----~~~i~~l~~~~~~v~ 429 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-------PEDK----LEIVKELREKYGPVA 429 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC-------cHHH----HHHHHHHHhcCCEEE
Confidence 4788999999999999999 999999999999999999999988876432 1222 345555555668999
Q ss_pred EEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 281 VFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||||+.||+.+++++|+.+.+ ...........||+++ +++.++...+
T Consensus 430 ~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 430 MVGDGINDAPALAAADVGIAM-GASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred EEeCCHHHHHHHHhCCEEEEe-CCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 999999999999999964433 1112222334599999 8999986543
|
. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.8e-07 Score=88.80 Aligned_cols=103 Identities=13% Similarity=0.155 Sum_probs=85.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-C-------ccccccEEEeCCCC-----------------C
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI-G-------IEEYFTAIVAAEDV-----------------H 256 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~-g-------l~~~Fd~iv~~e~v-----------------~ 256 (368)
+...||+.++|+.|+++|++++|+||+....++..++.+ | +.++||.|+++..- +
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g 262 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETG 262 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCC
Confidence 566899999999999999999999999999999999996 7 89999999886420 1
Q ss_pred CCCCCH------------HHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHH-HcCCeEEEEcC
Q 043738 257 RGKPDP------------EMFVYAAQLLKFIPERCIVFGNSN-QTVEAAH-DARMKCVAVAS 304 (368)
Q Consensus 257 ~~KP~~------------~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~-~aG~~~I~v~~ 304 (368)
..++.. --...+.+.+|+.++++++|||+. .|+..++ .+||.+|+|..
T Consensus 263 ~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 263 SLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred cccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 011111 125578888999999999999999 8999998 89999999764
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-07 Score=86.17 Aligned_cols=69 Identities=7% Similarity=0.130 Sum_probs=49.9
Q ss_pred CCChHHHHHHHHHcCcc----ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 227 THPRKTLETAIDSIGIE----EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 227 n~~~~~~~~~l~~~gl~----~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
+.....+...+...++. .+|..+. +.+-.|...+..+++++|+++++|++|||+.||++|++.+|.+++
T Consensus 147 ~~~~~~~~~~l~~~~~~~~~~~~~~ei~-----~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 147 DSRMPRFTALLADLGLAIVQGNRFSHVL-----GASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred hhHHHHHHHHHHHcCCeEEecCCeeEEe-----cCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 33344455566665554 2333332 233346778999999999999999999999999999999998754
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.1e-07 Score=81.80 Aligned_cols=125 Identities=19% Similarity=0.128 Sum_probs=80.9
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-------ccc----------EEEeCCCCCCCCCCHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-------YFT----------AIVAAEDVHRGKPDPE 263 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-------~Fd----------~iv~~e~v~~~KP~~~ 263 (368)
.+.+.||.+++++++++++++++++|++....+..+++.++-.+ +++ .++..++...+--++.
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~ 150 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSS 150 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcch
Confidence 36899999999999999999999999999999999999875221 111 1222223333333344
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC--CCccccCCCcEEEcCchhhhHHHHhc
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK--HPVYELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~--~~~~~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
.+. .+.-+++.+++.|||..|+.+|+...+- +.... +...+....-+-..++.|+...+-+-
T Consensus 151 vI~----~l~e~~e~~fy~GDsvsDlsaaklsDll--FAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekv 214 (220)
T COG4359 151 VIH----ELSEPNESIFYCGDSVSDLSAAKLSDLL--FAKDDLLNYCREQNLNFLEFETFYEILKEIEKV 214 (220)
T ss_pred hHH----HhhcCCceEEEecCCcccccHhhhhhhH--hhHHHHHHHHHHcCCCCcccccHHHHHHHHHHH
Confidence 444 4444567799999999999999998752 21110 01111122334456777776555443
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.9e-08 Score=86.94 Aligned_cols=96 Identities=18% Similarity=0.264 Sum_probs=68.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC---h-----------HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP---R-----------KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYA 268 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~---~-----------~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~ 268 (368)
.+.+++.+.|+.+.+.|+.++|+||.. . ..+..+++.+++. +...++...-...||.+-++..+
T Consensus 29 ~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 29 FFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp EC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 345689999999999999999999951 1 2334555666665 33333334447899999999999
Q ss_pred HHHcCC----CCCcEEEEcCC-----------HhhHHHHHHcCCeEE
Q 043738 269 AQLLKF----IPERCIVFGNS-----------NQTVEAAHDARMKCV 300 (368)
Q Consensus 269 le~lgi----~p~~~l~IGDs-----------~nDl~~A~~aG~~~I 300 (368)
++.++. +.++++||||. ..|.+=|.++|++..
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 999874 89999999996 678999999998743
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.8e-08 Score=92.75 Aligned_cols=60 Identities=12% Similarity=0.118 Sum_probs=55.7
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHH
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMF 265 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~ 265 (368)
||+.++|+.|+++|++++|+|++.+..+...++++|+..+|+.++++++....||+++..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~ 208 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTE 208 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCcccc
Confidence 788899999999999999999999999999999999999999999999998888887544
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.72 E-value=4e-08 Score=91.09 Aligned_cols=71 Identities=21% Similarity=0.320 Sum_probs=56.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC-CCcccc--------CCCcEEEcCchhh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASK-HPVYEL--------GAADLVVRHLDEL 324 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~-~~~~~~--------~~ad~vv~sl~eL 324 (368)
.-.+||.+.++..+.++++++|++|+||||+. .||.-+++.|++++++..+ +..++. ..+||-++++.++
T Consensus 220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 34689999999999999999999999999999 6999999999999998844 322221 1266666666665
Q ss_pred h
Q 043738 325 S 325 (368)
Q Consensus 325 ~ 325 (368)
.
T Consensus 300 ~ 300 (306)
T KOG2882|consen 300 L 300 (306)
T ss_pred h
Confidence 4
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.5e-08 Score=93.06 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=44.5
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 253 EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 253 e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
+....+.+|..+++.+++++|++++++++|||+.||++|++.+|..+++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 4456788999999999999999999999999999999999999987765
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.9e-08 Score=99.78 Aligned_cols=113 Identities=19% Similarity=0.218 Sum_probs=83.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++++.|++.|++++++|+.....++..++++|++ +| ++. .+++|.+. +++++..+++|+|
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-----~~~--~p~~K~~~----v~~l~~~~~~v~~ 471 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-----AEV--LPDDKAAL----IKELQEKGRVVAM 471 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-----ccC--ChHHHHHH----HHHHHHcCCEEEE
Confidence 378899999999999999999999999999999999999995 22 221 12333444 4444446789999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||+.+++++|+.+.+ . .........||+++ +++.++...+
T Consensus 472 VGDg~nD~~al~~A~vgia~-g-~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 472 VGDGINDAPALAQADVGIAI-G-AGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred EeCCCccHHHHhhCCEEEEe-C-CcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 99999999999999975433 2 22222234589999 4777776544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.66 E-value=1e-07 Score=88.44 Aligned_cols=53 Identities=21% Similarity=0.325 Sum_probs=45.2
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 253 EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 253 e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
+....+.+|..+++.+++++|+++++|++|||+.||++|++.+|..++++...
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 34567889999999999999999999999999999999999966555665543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.5e-08 Score=87.83 Aligned_cols=99 Identities=11% Similarity=0.104 Sum_probs=87.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-cccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+...||+.+||+.|.+. +.++|.|++...+++.++++++... +|+.+++.+.....+++ +...++.+|.++++||
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vI 116 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVI 116 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhhEE
Confidence 57899999999999988 9999999999999999999999775 89999998876555655 6777888999999999
Q ss_pred EEcCCHhhHHHHHHcCCeEEEEcC
Q 043738 281 VFGNSNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I~v~~ 304 (368)
+|||+..++.++.+.|+.+....+
T Consensus 117 iVDD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 117 IIDNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred EEeCChhhhccCccCEeecCCCCC
Confidence 999999999999999987666554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=9.4e-08 Score=83.86 Aligned_cols=76 Identities=25% Similarity=0.309 Sum_probs=62.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHh-hHHHHHHcCCeEEEEcCCCCcc--cc---CCCcEEEcCchhhhHHHH
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQ-TVEAAHDARMKCVAVASKHPVY--EL---GAADLVVRHLDELSVVDL 329 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~n-Dl~~A~~aG~~~I~v~~~~~~~--~~---~~ad~vv~sl~eL~~~~l 329 (368)
..+||.+..|+.+++.+|++|+++++|||..| |+-.|+..||..|.|..+.-+. +. ..+|..+++|.+....++
T Consensus 178 vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 178 VVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLII 257 (262)
T ss_pred EecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHH
Confidence 46899999999999999999999999999985 7999999999999998432211 11 238889999999887777
Q ss_pred hc
Q 043738 330 KN 331 (368)
Q Consensus 330 ~~ 331 (368)
++
T Consensus 258 q~ 259 (262)
T KOG3040|consen 258 QN 259 (262)
T ss_pred hh
Confidence 65
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.5e-07 Score=75.32 Aligned_cols=119 Identities=21% Similarity=0.260 Sum_probs=97.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
-.+++.+.+.+++|++. +.+++.|+-....+...++-.|+. .+.++... +++.-..++..|+-+.+.|++
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~a-------~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP--VERVFAGA-------DPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc--eeeeeccc-------CHHHHHHHHHHhcCCCcEEEE
Confidence 47889999999999999 999999999888899999988866 44444332 366777888888888899999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEc-CCCCccccCCCcEEEcCchhhhHHHHh
Q 043738 282 FGNSNQTVEAAHDARMKCVAVA-SKHPVYELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~-~~~~~~~~~~ad~vv~sl~eL~~~~l~ 330 (368)
|||+.||+.+.+++.+..+-+. .+...+.+..||+++.+..|+.+.+++
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 9999999999999998877777 444455556799999999999776654
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.8e-07 Score=99.68 Aligned_cols=113 Identities=14% Similarity=0.137 Sum_probs=87.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
.++||+.+.|+.|++.|++++++|+......+...+++|+..+|..+. |+....++++++..++++++|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~~-----------p~~K~~~i~~l~~~~~~v~~v 718 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVL-----------PDGKAEAIKRLQSQGRQVAMV 718 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCCC-----------HHHHHHHHHHHhhcCCEEEEE
Confidence 778999999999999999999999999999999999999976554321 333456777777788999999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||+.+++.+|+.+.+- .........||+++ +++.++...+
T Consensus 719 GDg~nD~~al~~Agvgia~g--~g~~~a~~~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 719 GDGINDAPALAQADVGIAMG--GGSDVAIETAAITLMRHSLMGVADAL 764 (834)
T ss_pred eCCHHHHHHHHhCCeeEEec--CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999999999999865552 23333334466555 6777776655
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.52 E-value=4e-07 Score=98.95 Aligned_cols=125 Identities=15% Similarity=0.185 Sum_probs=95.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC----------------CCCCHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR----------------GKPDPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~----------------~KP~~~~~~ 266 (368)
++.||+.+.++.|++.|++++++||.....+....+++|+...++.++++.+... ....|+-..
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~ 607 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence 7789999999999999999999999999999999999999887777766654321 234566666
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
.+.+.++-..+.+.|+||+.||..++++|+++..+ ......-....||+++ +++..+...+
T Consensus 608 ~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~-g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 608 KIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec-CCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 66666666668899999999999999999965443 1111222223589999 6688886644
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.6e-07 Score=82.64 Aligned_cols=49 Identities=16% Similarity=0.187 Sum_probs=45.9
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED 254 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~ 254 (368)
|++.++|++|++.|++++|+|++.+..+...++++|+..+|+.+++++.
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 7788999999999999999999999999999999999999999888765
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.3e-06 Score=78.43 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=54.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc----CCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA----RMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a----G~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
..+.-|...+.++++++|+..+++++|||+.||+.|.+.+ |+. |.|.... ..|.+.+++..++. ..|+.
T Consensus 170 p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vavg~a~-----~~A~~~l~~~~~v~-~~L~~ 242 (266)
T PRK10187 170 PRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKVGTGA-----TQASWRLAGVPDVW-SWLEM 242 (266)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEECCCC-----CcCeEeCCCHHHHH-HHHHH
Confidence 4455678999999999999999999999999999999988 644 4443221 23889999999884 44566
Q ss_pred cc
Q 043738 332 LA 333 (368)
Q Consensus 332 L~ 333 (368)
|+
T Consensus 243 l~ 244 (266)
T PRK10187 243 IT 244 (266)
T ss_pred HH
Confidence 55
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.2e-07 Score=75.95 Aligned_cols=98 Identities=18% Similarity=0.298 Sum_probs=77.5
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
-++.+...|++++|+|+.....++..++.+|+..+|..+ +-|...|..+++++++.+++|.||||..+|+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~---------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlp 113 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI---------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLP 113 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech---------HhHHHHHHHHHHHhCCCHHHhhhhcCccccHH
Confidence 466678889999999999999999999999988665543 23578899999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEc
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
+..++|+.++. ...+.. -...++||..
T Consensus 114 vm~~vGls~a~-~dAh~~-v~~~a~~Vt~ 140 (170)
T COG1778 114 VMEKVGLSVAV-ADAHPL-LKQRADYVTS 140 (170)
T ss_pred HHHHcCCcccc-cccCHH-HHHhhHhhhh
Confidence 99999987443 333321 1123566554
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.35 E-value=7.7e-07 Score=79.19 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=68.5
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChH-------HHHHHHH-HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRK-------TLETAID-SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~-------~~~~~l~-~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l 272 (368)
.+++.||+.+.|+.|.+.|..++++|..+.. ....+++ ++|...+-+.+++.+ |. .+
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-----K~----------~v 135 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-----KT----------LV 135 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-----GG----------GC
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-----CC----------eE
Confidence 4689999999999999999778877776433 3334444 445333334555532 21 12
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHh
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~ 330 (368)
+.+ ++|+|+...+..+...|+++|.+...+..... .-..+.+++|+...++.
T Consensus 136 ~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~--~~~Rv~~W~ei~~~i~~ 187 (191)
T PF06941_consen 136 GGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES--NFPRVNNWEEIEDLILS 187 (191)
T ss_dssp --S----EEEESSSHHHSS-SSESSEEEEE--GGGTT----TSEEE-STTSHHHHHHH
T ss_pred ecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC--CCccCCCHHHHHHHHHh
Confidence 222 89999999999999999999999866554433 46788999999776654
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.7e-05 Score=68.08 Aligned_cols=120 Identities=9% Similarity=0.081 Sum_probs=89.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC---ccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG---IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~g---l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.+++++...++.-+..|++++|.|.+....++.+..+.+ +..|++..+.. .++ .|-....|..+.+.+|.++.++
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG-~K~e~~sy~~I~~~Ig~s~~ei 200 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIG-LKVESQSYKKIGHLIGKSPREI 200 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccc-ceehhHHHHHHHHHhCCChhhe
Confidence 778999999999999999999999998888888887654 33333332222 112 3556788999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCC---CcEEEcCchhh
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHPVYELGA---ADLVVRHLDEL 324 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~---ad~vv~sl~eL 324 (368)
+|.-|...-..+|..+|+.+..+.++........ .-.++.+|..|
T Consensus 201 LfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 201 LFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred EEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence 9999999999999999999887764433222111 23455666655
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.9e-05 Score=68.08 Aligned_cols=95 Identities=14% Similarity=0.132 Sum_probs=60.9
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHH---HHHHHc---CccccccEEEeCCC---------CCCCCC---CHHHH
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLE---TAIDSI---GIEEYFTAIVAAED---------VHRGKP---DPEMF 265 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~---~~l~~~---gl~~~Fd~iv~~e~---------v~~~KP---~~~~~ 265 (368)
+.|++.++++.++++|++++++|+.+..... ..+..+ |..-....++++.. +...+| +.+.+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l 107 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACL 107 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHH
Confidence 3588999999999999999999999877663 555552 21111123444332 112333 34455
Q ss_pred HHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCe
Q 043738 266 VYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 266 ~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
..+.+.+.-. ..-++.+||+.+|+++=.++|+.
T Consensus 108 ~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 108 RDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 5555544321 22345688999999999999987
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.17 E-value=7.1e-06 Score=75.02 Aligned_cols=43 Identities=12% Similarity=0.125 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 258 GKPDPEMFVYAAQLLKF--IPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi--~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
+--|...+..+++.+++ .+++|++|||+.||+.|++.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 44457888888888876 67799999999999999999998754
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=9.6e-06 Score=86.53 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=81.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.+++|++.+.++.|++.|++++++|+..........+++|+..++. ..+..| +. +.++++ .+..++|
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~------~~p~~K--~~----~v~~l~-~~~~v~m 633 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG------LLPEDK--VK----AVTELN-QHAPLAM 633 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC------CCHHHH--HH----HHHHHh-cCCCEEE
Confidence 3889999999999999999999999999999999999999963322 111112 23 444444 2468999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||..+++.+++.+.+- .........+|+++ +++.+|...+
T Consensus 634 vGDgiNDapAl~~A~vgia~g--~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMG--SGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred EECCHHhHHHHHhCCeeEEec--CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 999999999999999765553 22223334477776 5666665433
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.5e-06 Score=89.85 Aligned_cols=125 Identities=14% Similarity=0.097 Sum_probs=88.7
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc----ccEEEeCCCC----------------CCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY----FTAIVAAEDV----------------HRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~----Fd~iv~~e~v----------------~~~KP~ 261 (368)
.++.+++.+.++.|++.|++++++|+..........+++|+... ....+++.+. -..+..
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 37899999999999999999999999999999999999998531 1112222110 111223
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC--chhhhHHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH--LDELSVVD 328 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s--l~eL~~~~ 328 (368)
|+--..+.+.++-..+.+.++||+.||+.|.++|++++.+- .+ .......||+++.+ +..+...+
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g-~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SG-TEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CC-cHHHHHhcCeEEccCCHHHHHHHH
Confidence 44446666666666678889999999999999999865442 22 22222359999977 88876654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.7e-06 Score=73.24 Aligned_cols=82 Identities=15% Similarity=0.212 Sum_probs=64.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc-ccc-cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE-EYF-TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~-~~F-d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
+.++||+.++|+.++.. +.++|+|++.+.++..+++.++.. .+| +.+++.++.. .+. .+.+-..++.+.+.+
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~--~~~---~KdL~~i~~~d~~~v 130 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG--SPH---TKSLLRLFPADESMV 130 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC--CCc---cccHHHHcCCCcccE
Confidence 68899999999999966 999999999999999999999988 488 6777776543 111 112224467789999
Q ss_pred EEEcCCHhhH
Q 043738 280 IVFGNSNQTV 289 (368)
Q Consensus 280 l~IGDs~nDl 289 (368)
+.|+|+..-.
T Consensus 131 vivDd~~~~~ 140 (156)
T TIGR02250 131 VIIDDREDVW 140 (156)
T ss_pred EEEeCCHHHh
Confidence 9999998543
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.6e-05 Score=83.31 Aligned_cols=113 Identities=16% Similarity=0.144 Sum_probs=81.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++.|++.+.++.|++.|++++++|+.+........+.+|+.++|.. .. |+--..+.+.+.-....+.|+
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~---------~~--PedK~~~v~~lq~~g~~Vamv 514 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAE---------AT--PEDKIALIRQEQAEGKLVAMT 514 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcC---------CC--HHHHHHHHHHHHHcCCeEEEE
Confidence 7889999999999999999999999999999999999998754321 11 333333333333334579999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||..+..++++++++- .........+|++. +++..+...+
T Consensus 515 GDG~NDapAL~~AdvGiAm~--~gt~~akeaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 515 GDGTNDAPALAQADVGVAMN--SGTQAAKEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred CCCcchHHHHHhCCEeEEeC--CCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 99999999999999876653 22222233478877 4566665444
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0001 Score=67.23 Aligned_cols=98 Identities=7% Similarity=-0.059 Sum_probs=62.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHH---HHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC-CCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKT---LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF-IPE 277 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~---~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi-~p~ 277 (368)
.+..|++.++++.++++|+.|+++||.+... +...|.+.|+..+ +.++........+..........+++-- ...
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYr 197 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYR 197 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCce
Confidence 5889999999999999999999999998665 6677778888765 5555543212233211111122212211 123
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
-+..|||..+|+.+ ..+|.++.-
T Consensus 198 Iv~~iGDq~sDl~G-~~~~~RtFK 220 (229)
T TIGR01675 198 IWGNIGDQWSDLLG-SPPGRRTFK 220 (229)
T ss_pred EEEEECCChHHhcC-CCccCceee
Confidence 46889999999955 234444443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.9e-05 Score=81.41 Aligned_cols=113 Identities=15% Similarity=0.125 Sum_probs=85.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++.|++++.+++|++.|+++.++|+-+........+++|+.++|.. -.|+--..+.+.++-.-+-+.|+
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~-----------~~PedK~~iV~~lQ~~G~~VaMt 509 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAE-----------CKPEDKINVIREEQAKGHIVAMT 509 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcC-----------CCHHHHHHHHHHHHhCCCEEEEE
Confidence 7889999999999999999999999999999999999999754322 12444455555555444678999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||..+..+|.++..|- ....-....||.+. +++..+...+
T Consensus 510 GDGvNDAPALa~ADVGIAMg--sGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 510 GDGTNDAPALAEANVGLAMN--SGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred CCChhhHHHHHhCCEEEEeC--CCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 99999999999999765553 22222334588887 5677666554
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.9e-05 Score=81.47 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=84.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++.||+++.++.|++.|+++.++|+-+......+.+.+|++++|... .|+--..+.+.++-.-+-+.|+
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~-----------~PedK~~iV~~lQ~~G~~VaMt 513 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEA-----------TPEDKLALIRQEQAEGRLVAMT 513 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEccC-----------CHHHHHHHHHHHHHcCCeEEEE
Confidence 67899999999999999999999999999999999999997533221 2444445555554444669999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||..+..+|.++..|- ....-....||.+. +++..+...+
T Consensus 514 GDGvNDAPALa~ADVGIAMg--sGTdvAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 514 GDGTNDAPALAQADVGVAMN--SGTQAAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred CCCcchHHHHHhCCEeEEeC--CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 99999999999999766553 22222233588887 4566665554
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.7e-05 Score=81.91 Aligned_cols=114 Identities=20% Similarity=0.244 Sum_probs=84.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..+.|+..+.++.|++.|++++++|+-.....+...+++|+++++..+. |+--....++++-.-..++|
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell-----------PedK~~~V~~l~~~g~~Vam 604 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL-----------PEDKAEIVRELQAEGRKVAM 604 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC-----------cHHHHHHHHHHHhcCCEEEE
Confidence 4888999999999999999999999999999999999999976554432 22223333444433378999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||..+...+.++..+ +....-....||.++ +++..++..+
T Consensus 605 VGDGINDAPALA~AdVGiAm--G~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 605 VGDGINDAPALAAADVGIAM--GSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred EeCCchhHHHHhhcCeeEee--cCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999999999999976555 223333344588877 4566665544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=9.6e-05 Score=76.69 Aligned_cols=46 Identities=11% Similarity=0.139 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--cCCHhhHHHHHHcCCeEEEEc
Q 043738 258 GKPDPEMFVYAAQLLKFIPERCIVF--GNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~~l~I--GDs~nDl~~A~~aG~~~I~v~ 303 (368)
+-.|...++.+++.+++..+++++| ||+.||++|.+.+|.++++-.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence 4566899999999999999999999 999999999999999877733
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.8e-05 Score=73.89 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=41.7
Q ss_pred CCCCCCCHHHHHHHHHHc---CCCCCcEEEEcCCHhhHHHHHHcC-CeEEEEc
Q 043738 255 VHRGKPDPEMFVYAAQLL---KFIPERCIVFGNSNQTVEAAHDAR-MKCVAVA 303 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~l---gi~p~~~l~IGDs~nDl~~A~~aG-~~~I~v~ 303 (368)
++.+-.|..+++++++++ |++++++++|||+.||++|.+.+| .++++-+
T Consensus 170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 345556789999999999 999999999999999999999999 5655533
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00016 Score=67.92 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 258 GKPDPEMFVYAAQLLKFI--PERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~--p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
+-.|....+.+.+.++-. +-.++.+|||.||+.|.+.+.+.+|.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 345677888888877654 45899999999999999999988655
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00015 Score=73.60 Aligned_cols=90 Identities=7% Similarity=0.040 Sum_probs=55.3
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCcccc--------ccEEEeCCCCCCCCCCH-HHHHHHHHHcC
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS-IGIEEY--------FTAIVAAEDVHRGKPDP-EMFVYAAQLLK 273 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~gl~~~--------Fd~iv~~e~v~~~KP~~-~~~~~~le~lg 273 (368)
+.+.+.+ .++++|. .+++|.++..+++.+.+. +|++.. .+..+++.-.+..-... +-...+.+.+|
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g 186 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG 186 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhC
Confidence 4444444 4466774 499999999999999975 776632 13344443211100011 11233335566
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCe
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
.+... +++|||.+|+.+...++-.
T Consensus 187 ~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 187 DALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred CCCce-EEEECCccHHHHHHhCCcc
Confidence 55444 9999999999999999865
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.9e-05 Score=81.16 Aligned_cols=72 Identities=10% Similarity=-0.006 Sum_probs=51.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhccc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLA 333 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~ 333 (368)
..+-.|..+++.+++ +++++.+++|||+.||+.|.+.++...+.+..++. ...|++.+++.+|+ ...|+.|+
T Consensus 653 p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~---~s~A~~~l~~~~eV-~~~L~~l~ 724 (726)
T PRK14501 653 PAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG---ESRARYRLPSQREV-RELLRRLL 724 (726)
T ss_pred ECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC---CCcceEeCCCHHHH-HHHHHHHh
Confidence 344556888888888 77889999999999999999997432233332222 23589999999886 44455554
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=97.92 E-value=7.8e-06 Score=74.92 Aligned_cols=90 Identities=11% Similarity=0.115 Sum_probs=58.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeCCCCCCC----CCCHHHHHHHHHHcCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAAEDVHRG----KPDPEMFVYAAQLLKF 274 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~e~v~~~----KP~~~~~~~~le~lgi 274 (368)
.+..||+.+|++.++++|+.|+++||.... .+...|.+.|+..+-..++-....... .-|..-...+.++ |.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~-Gy 192 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKK-GY 192 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHT-TE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHc-CC
Confidence 488899999999999999999999997544 455666777866433333333222111 1123334444444 32
Q ss_pred CCCcEEEEcCCHhhHHHHHH
Q 043738 275 IPERCIVFGNSNQTVEAAHD 294 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~ 294 (368)
.-++.|||..+|+..++.
T Consensus 193 --~Ii~~iGD~~~D~~~~~~ 210 (229)
T PF03767_consen 193 --RIIANIGDQLSDFSGAKT 210 (229)
T ss_dssp --EEEEEEESSGGGCHCTHH
T ss_pred --cEEEEeCCCHHHhhcccc
Confidence 238999999999988443
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.7e-05 Score=69.60 Aligned_cols=51 Identities=22% Similarity=0.362 Sum_probs=38.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
+..--|...++++++++++++++++++|||.||+.|. ..+...|.|.+...
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQP 211 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-H
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCCH
Confidence 3445568999999999999999999999999999999 66667777765443
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00051 Score=63.84 Aligned_cols=103 Identities=13% Similarity=0.285 Sum_probs=75.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHH---HcCccccccEE-------E----e-C---------C--CC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID---SIGIEEYFTAI-------V----A-A---------E--DV 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~---~~gl~~~Fd~i-------v----~-~---------e--~v 255 (368)
..+-+.+.++++.+...|+++..+|.....+..+.++ .+|++ |+.. + + . + -.
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf 157 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILF 157 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEE
Confidence 4667899999999999999999999988776655554 45654 2111 0 0 0 0 01
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHH----HcCCeEEEEcCCC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH----DARMKCVAVASKH 306 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~----~aG~~~I~v~~~~ 306 (368)
..+..+..++..+++++|..|+.+|||+|+...+.... ..|+.++++....
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTG 212 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcc
Confidence 23456789999999999999999999999997765544 4688888887443
|
The function is not known. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.79 E-value=8.4e-05 Score=81.52 Aligned_cols=125 Identities=17% Similarity=0.143 Sum_probs=85.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----------------CCCCCHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----------------RGKPDPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----------------~~KP~~~~~~ 266 (368)
++.|++.+.++.|++.|++++++|+-....+....+.+|+..--..++++.+.. ...-.|+--.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 788999999999999999999999999999999999999863222334332211 1122233334
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc--CchhhhHHH
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR--HLDELSVVD 328 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~--sl~eL~~~~ 328 (368)
.+.+.++-.-..+.|+||+.||..|.++|.++..+-..+ ..-....||+++- +|..+...+
T Consensus 659 ~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~g-tdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 659 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISG-TEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCc-cHHHHHhCCEEEecCCHHHHHHHH
Confidence 444444333457999999999999999999765542122 2223345899986 666665444
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.79 E-value=9.9e-05 Score=80.20 Aligned_cols=122 Identities=15% Similarity=0.150 Sum_probs=84.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----------------CCCCCHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----------------RGKPDPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----------------~~KP~~~~~~ 266 (368)
++.|++.+.++.|++.|+++.++|+-+........+++|+.. +.++++.+.. ...-.|+--.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 778999999999999999999999999999999999999962 2333332211 0112233333
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
.+.+.++-.-..+.|+||+.||..+.++|.++..+- ++ ..-....||.++ +++..+...+
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~g-tdvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TA-ADIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-Cc-cHHHHHhCCEEEecCChHHHHHHH
Confidence 444444434467999999999999999999876553 22 222234588887 5666665444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.78 E-value=7.1e-05 Score=80.17 Aligned_cols=119 Identities=17% Similarity=0.131 Sum_probs=82.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC----------------------CCCCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV----------------------HRGKP 260 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v----------------------~~~KP 260 (368)
++.|++.+.++.|++.|+++.++|+.+........+++|+... +++++++ ...+-
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 7889999999999999999999999999999999999998641 1211111 01122
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhH
Q 043738 261 DPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSV 326 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~ 326 (368)
.|+--..+.+.++-.-..+.|+||+.||..+.++|.++..+ .+ ...-....||.++ +++..+..
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm-~~-gtdvAkeaADivLl~d~l~~I~~ 584 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV-AG-ATDAARSAADIVLTEPGLSVIVD 584 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe-cC-CcHHHHHhCCEEEEcCChHHHHH
Confidence 34444445555554557799999999999999999987555 22 2222233588777 44554443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=8.5e-05 Score=80.95 Aligned_cols=122 Identities=12% Similarity=0.090 Sum_probs=86.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----------------CCCCCHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----------------RGKPDPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----------------~~KP~~~~~~ 266 (368)
++.|++.+.++.|++.|+++.++|+-+........+.+|+.. +.++++.+.. ...-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 788999999999999999999999999999999999999952 2334433221 1122344445
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
.+.+.++-.-+-+.|+||+.||..+.++|.++..+- ++ ..-....||.++ ++|..+...+
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~g-tdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SG-ADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cc-cHHHHHhcCEEEecCChHHHHHHH
Confidence 555555544567999999999999999999775542 22 222234589888 6676665544
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=8.8e-05 Score=80.80 Aligned_cols=123 Identities=12% Similarity=0.092 Sum_probs=87.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC----------------CCCCCHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH----------------RGKPDPEMF 265 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~----------------~~KP~~~~~ 265 (368)
.++.|++.+.++.|++.|+++.++|+-+........+.+|+. -+.++++.+.. ...-.|+--
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 377899999999999999999999999999999999999995 23344443321 112234444
Q ss_pred HHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 266 VYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 266 ~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
..+.+.++-.-.-+.|+||+.||..+.++|.++..+- ++ ..-....||.++ +++..+...+
T Consensus 627 ~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~g-tdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 627 ERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GA-VDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred HHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-Cc-CHHHHHhCCEEEecCChHHHHHHH
Confidence 4455555444567999999999999999999775553 22 222334588888 5666665544
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=9.7e-05 Score=68.43 Aligned_cols=46 Identities=15% Similarity=0.083 Sum_probs=38.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CHhhHHHHHHcCCeEEEEc
Q 043738 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGN----SNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 254 ~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD----s~nDl~~A~~aG~~~I~v~ 303 (368)
-...+--|..+++.++++ ++++++||| +.||++|.+.+|...+.|.
T Consensus 182 I~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 182 VFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred eeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 345566678999999999 599999999 8999999998887767776
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00057 Score=63.51 Aligned_cols=91 Identities=9% Similarity=0.110 Sum_probs=56.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHH-HHHHH-cCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFV-YAAQL-LKFIP 276 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~-~~le~-lgi~p 276 (368)
.+..|++.+|.+.+++.|++|+++||.... .+...|.+.|+..+ +.++-.......+...--++ ...++ ..-..
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY 222 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQEGY 222 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence 588899999999999999999999998754 34455666777643 54444432111121222222 11121 11123
Q ss_pred CcEEEEcCCHhhHHHHH
Q 043738 277 ERCIVFGNSNQTVEAAH 293 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~ 293 (368)
.-+..|||..+|+.+..
T Consensus 223 rIv~~iGDq~sDl~G~~ 239 (275)
T TIGR01680 223 NIVGIIGDQWNDLKGEH 239 (275)
T ss_pred eEEEEECCCHHhccCCC
Confidence 44689999999995444
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00014 Score=80.47 Aligned_cols=125 Identities=13% Similarity=0.098 Sum_probs=87.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc----------ccEEEeCCCCC---------------
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY----------FTAIVAAEDVH--------------- 256 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~----------Fd~iv~~e~v~--------------- 256 (368)
.++.+++.+.++.|++.|++++++|+..........+.+|+..- -..++++.+..
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 48899999999999999999999999999999999999998532 12345543321
Q ss_pred -CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC--chhhhHH
Q 043738 257 -RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH--LDELSVV 327 (368)
Q Consensus 257 -~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s--l~eL~~~ 327 (368)
...-.|+--..+.+.++-.-..+.++||+.||..|.+.|.++..+-..+.. .....||+++.+ |..+...
T Consensus 725 V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~-vak~aADivl~dd~f~~I~~~ 797 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSD-VAKDASDIVLSDDNFASILNA 797 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccH-HHHHhcCEEEecCCHHHHHHH
Confidence 112234444445555544456799999999999999999977554212221 223358999854 6665543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.74 E-value=9.3e-05 Score=68.79 Aligned_cols=68 Identities=12% Similarity=0.085 Sum_probs=52.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCC--CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCC----CcEEEcCch
Q 043738 255 VHRGKPDPEMFVYAAQLLKFI--PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGA----ADLVVRHLD 322 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~--p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~----ad~vv~sl~ 322 (368)
...+-.|...++++++++|++ .+++++|||+.||++|++.+|.+++|-+......++.. +++++.+.+
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~ 244 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPG 244 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCC
Confidence 345667789999999999999 99999999999999999999998777554432123333 348876543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00014 Score=67.31 Aligned_cols=47 Identities=15% Similarity=0.129 Sum_probs=39.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CHhhHHHHHHcCCeEEEEcCCC
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGN----SNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGD----s~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+..+--|..+++.++ +++++++||| +.||++|.+.-|..++.|.++.
T Consensus 184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHH
Confidence 455666677777777 8999999999 7999999999999988888654
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00025 Score=61.11 Aligned_cols=91 Identities=15% Similarity=0.192 Sum_probs=64.6
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHH----HHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTL----ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~----~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.-+++|+....++|-.++++|+...-.+ ..+.+.+.+......++.++. .||...---+.++..++ -++
T Consensus 117 evA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk---~k~~qy~Kt~~i~~~~~----~Ih 189 (237)
T COG3700 117 EVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK---PKPGQYTKTQWIQDKNI----RIH 189 (237)
T ss_pred HHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC---CCcccccccHHHHhcCc----eEE
Confidence 3467888888999999999999754433 344456666655556666653 24433334455666555 499
Q ss_pred EcCCHhhHHHHHHcCCeEEEEc
Q 043738 282 FGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
.|||.+|+.+|+++|..-|-+-
T Consensus 190 YGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 190 YGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred ecCCchhhhHHHhcCccceeEE
Confidence 9999999999999999987775
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00063 Score=65.26 Aligned_cols=90 Identities=13% Similarity=0.175 Sum_probs=69.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHH---HHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTL---ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~---~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++||+.++|+.|+++|++++++||...... ...++.+|+...++.|+++.. .....++..+......
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~---------~~~~~l~~~~~~~~~~ 114 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF---------AAAAYLKSINFPKDKK 114 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH---------HHHHHHHhhccCCCCE
Confidence 4569999999999999999999999874433 445577898877888887742 4555666656554556
Q ss_pred EEEcCCHhhHHHHHHcCCeEEE
Q 043738 280 IVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
++++++..+.+.++++|+.++.
T Consensus 115 V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 115 VYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEEEcCHHHHHHHHHCCCEEec
Confidence 8888888999999999998765
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.56 E-value=2e-05 Score=67.80 Aligned_cols=84 Identities=15% Similarity=0.235 Sum_probs=59.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCc-cccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGI-EEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl-~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+.+.||+.+||+.+... +.++|.|.+...++..+++.+.- ..+|+.+++.+.....+. .+..-++.+|-+.+++|
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~---~~~KdL~~l~~~~~~vv 110 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKG---SYIKDLSKLGRDLDNVV 110 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETT---EEE--GGGSSS-GGGEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccccc---ccccchHHHhhccccEE
Confidence 57899999999999766 99999999999999999999876 567888887764321111 01145556677889999
Q ss_pred EEcCCHhhH
Q 043738 281 VFGNSNQTV 289 (368)
Q Consensus 281 ~IGDs~nDl 289 (368)
+|+|+..-.
T Consensus 111 ivDD~~~~~ 119 (159)
T PF03031_consen 111 IVDDSPRKW 119 (159)
T ss_dssp EEES-GGGG
T ss_pred EEeCCHHHe
Confidence 999999754
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0011 Score=59.46 Aligned_cols=114 Identities=23% Similarity=0.234 Sum_probs=72.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc--------cccEE-------------------EeCC-
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE--------YFTAI-------------------VAAE- 253 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~--------~Fd~i-------------------v~~e- 253 (368)
..+.||+.+.++.+... ++-+++|.+-+.+++...+.+|+.. -+|.+ +.++
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 58899999999999987 7778888887888888888877521 01210 0011
Q ss_pred -------------------------CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc-CCeEEEEcCCCC
Q 043738 254 -------------------------DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA-RMKCVAVASKHP 307 (368)
Q Consensus 254 -------------------------~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a-G~~~I~v~~~~~ 307 (368)
.++- --+..+.+..++.-+++-+ +++||||.+|++|.+.+ |-+.++|.-+.+
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGg-g~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGG-GEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccC-cchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCC
Confidence 0111 2234555556666666555 99999999999999887 333344443333
Q ss_pred ccccCCCcEEE
Q 043738 308 VYELGAADLVV 318 (368)
Q Consensus 308 ~~~~~~ad~vv 318 (368)
.+.+..||..|
T Consensus 239 eYal~eAdVAv 249 (315)
T COG4030 239 EYALKEADVAV 249 (315)
T ss_pred cccccccceEE
Confidence 35555677655
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00072 Score=71.36 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=82.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++.|++...+..|++.|++++++||-+....+...+++| ++.+++ +..+..| .+.++.+-+ ....+.|
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~a-ev~P~~K--~~~Ik~lq~----~~~~VaM 790 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYA-EVLPEQK--AEKIKEIQK----NGGPVAM 790 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEe-ccCchhh--HHHHHHHHh----cCCcEEE
Confidence 4788999999999999999999999999999999999999 444433 3322222 344444443 3467999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||-.+.-.+.++..+..+ ..-....||++. +++.+++...
T Consensus 791 VGDGINDaPALA~AdVGIaig~g--s~vAieaADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 791 VGDGINDAPALAQADVGIAIGAG--SDVAIEAADIVLMRNDLRDVPFAI 837 (951)
T ss_pred EeCCCCccHHHHhhccceeeccc--cHHHHhhCCEEEEccchhhhHHHH
Confidence 99999999999888876544333 333444588777 5566665544
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00028 Score=78.45 Aligned_cols=126 Identities=13% Similarity=0.161 Sum_probs=83.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc----------------------------------
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT---------------------------------- 247 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd---------------------------------- 247 (368)
.++.+|+.+.++.|++.|++++++||-....+.......|+-..-.
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 709 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNL 709 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhh
Confidence 3889999999999999999999999998888888877776532111
Q ss_pred -------EEEeCCCCC----------------------CCCCCHHHHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCC
Q 043738 248 -------AIVAAEDVH----------------------RGKPDPEMFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 248 -------~iv~~e~v~----------------------~~KP~~~~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
.++.++... ..+-.|.--..+.+.+.-. ...++++|||.||+.|.++|.+
T Consensus 710 ~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdV 789 (1057)
T TIGR01652 710 GDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADV 789 (1057)
T ss_pred ccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCe
Confidence 133332110 0011111111222222222 4679999999999999999987
Q ss_pred eEEEEcCCCCccccCCCcEEEcCchhhhHHH
Q 043738 298 KCVAVASKHPVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 298 ~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
++ ++.+.........||+++.++..|...+
T Consensus 790 GI-gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 790 GV-GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred ee-EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 64 5555443223345999999988887665
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00062 Score=75.18 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=84.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc------------------------cEEEeCCCCC--
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF------------------------TAIVAAEDVH-- 256 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F------------------------d~iv~~e~v~-- 256 (368)
++.+++.+.++.|++.|++++++|+.....+....+.+|+..-- ..++++.+..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 77899999999999999999999999999999999999884210 1244443221
Q ss_pred ----------------CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 257 ----------------RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 257 ----------------~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
...-.|+--..+.+.++-.-.-+.++||+.||+.|.++|.++..+-..+.+ .....||+++.+
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~-vak~aADivL~d 726 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD-VSKQAADMILLD 726 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccH-HHHHhhceEEec
Confidence 122223333333333433345799999999999999999976555212222 123358998865
Q ss_pred --chhhhHHH
Q 043738 321 --LDELSVVD 328 (368)
Q Consensus 321 --l~eL~~~~ 328 (368)
|.-+...+
T Consensus 727 d~f~~Iv~ai 736 (997)
T TIGR01106 727 DNFASIVTGV 736 (997)
T ss_pred CCHHHHHHHH
Confidence 66665543
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0011 Score=66.34 Aligned_cols=102 Identities=10% Similarity=0.137 Sum_probs=70.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---------CccccccEEEeCCC-----------------C
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---------GIEEYFTAIVAAED-----------------V 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---------gl~~~Fd~iv~~e~-----------------v 255 (368)
+...|.+..+|+.|++.|.++.++||++-.++...+..+ .+.++||.||+... .
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 455788999999999999999999999999999988854 36789999887531 0
Q ss_pred CCCCCC-------------HHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHc-CCeEEEEc
Q 043738 256 HRGKPD-------------PEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDA-RMKCVAVA 303 (368)
Q Consensus 256 ~~~KP~-------------~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~a-G~~~I~v~ 303 (368)
+..+.. .--...+.+.+|....++++|||+. .||-..++. |+.+++|-
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 110000 1125577778899899999999999 797766665 99999975
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0017 Score=58.84 Aligned_cols=82 Identities=11% Similarity=0.121 Sum_probs=58.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHH----HHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKT----LETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~----~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
..+.||+.+|++..-++|..|..+||..... +..-|...|+...-. .++.- ...+++..-+..+-+ ..
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk---k~~k~Ke~R~~~v~k----~~ 193 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK---KDKKSKEVRRQAVEK----DY 193 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe---eCCCcHHHHHHHHhh----cc
Confidence 4788999999999999999999999987665 345566777775443 33333 234555555555555 45
Q ss_pred CcEEEEcCCHhhHH
Q 043738 277 ERCIVFGNSNQTVE 290 (368)
Q Consensus 277 ~~~l~IGDs~nDl~ 290 (368)
.-++.|||..+|..
T Consensus 194 ~iVm~vGDNl~DF~ 207 (274)
T COG2503 194 KIVMLVGDNLDDFG 207 (274)
T ss_pred ceeeEecCchhhhc
Confidence 67899999998753
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00044 Score=63.90 Aligned_cols=71 Identities=11% Similarity=-0.084 Sum_probs=55.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc-------CCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHh
Q 043738 258 GKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA-------RMKCVAVASKHPVYELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a-------G~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~ 330 (368)
+..|...+..+++++++.+..+++|||+.||+.|++.+ |..+|.+..+. ....|++++++..++.. .|+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~---~~~~A~~~~~~~~~v~~-~L~ 240 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS---KKTVAKFHLTGPQQVLE-FLG 240 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC---cCCCceEeCCCHHHHHH-HHH
Confidence 33457999999999999999999999999999999998 66666665232 12348999999999743 344
Q ss_pred cc
Q 043738 331 NL 332 (368)
Q Consensus 331 ~L 332 (368)
.|
T Consensus 241 ~l 242 (244)
T TIGR00685 241 LL 242 (244)
T ss_pred HH
Confidence 44
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00032 Score=62.70 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=43.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
.+.+.+|+..++.++++++++++++++|||+.||+.|++.+|+.+++
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 46688899999999999999999999999999999999999987653
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0015 Score=71.39 Aligned_cols=102 Identities=15% Similarity=0.109 Sum_probs=77.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cEEEeCCCCC----------------CCCCCHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TAIVAAEDVH----------------RGKPDPE 263 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~iv~~e~v~----------------~~KP~~~ 263 (368)
.++.+++++.++.|++.|+++.++||-+......+.+.+|+..-- +.++++.+.. ..+-.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 589999999999999999999999999999999999999976544 3366654321 1122234
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
--..+.+.++-.-.-+.+.|||.||..|.++|.+++.+..
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 4444444444445779999999999999999998765644
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00055 Score=76.38 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=42.2
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHH
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l 329 (368)
.-+++||||.||+.|.++|.+++ ++.|.........+|+.+..|..|..+++
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 56899999999999999998764 66666554455569999999999877765
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0013 Score=68.83 Aligned_cols=125 Identities=14% Similarity=0.169 Sum_probs=87.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc----EEEeCCCCCC----------------CCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT----AIVAAEDVHR----------------GKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd----~iv~~e~v~~----------------~KP~ 261 (368)
.+|++++++.++.|++.|+++.++|+-.......+.++.|+...-+ ..+++.++.. ..-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 4889999999999999999999999999999999999999765544 3444433211 1223
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVV 327 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~ 327 (368)
|..-..+.+.|+-.-+-+.+-||+.||-.+.+.|.++..|--.+... ...++|.|. ++|+-+...
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV-aKeAsDMVL~DDnFstIvaA 729 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV-AKEASDMVLADDNFSTIVAA 729 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHh-hHhhhhcEEecCcHHHHHHH
Confidence 44445555555555688999999999999999999876663222221 122466666 455555443
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0017 Score=53.27 Aligned_cols=84 Identities=15% Similarity=0.114 Sum_probs=65.5
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH------cCC
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL------LKF 274 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~------lgi 274 (368)
.+.++|.++++++++++.|+-+..+|=......-..+..+++..||+.++..---.+ -.++-+++.. ..+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePhP~K----~~ML~~llr~i~~er~~~i 114 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPHPYK----FLMLSQLLREINTERNQKI 114 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCCChh----HHHHHHHHHHHHHhhcccc
Confidence 378999999999999999999999999888888899999999999998876422111 2233333333 246
Q ss_pred CCCcEEEEcCCHhh
Q 043738 275 IPERCIVFGNSNQT 288 (368)
Q Consensus 275 ~p~~~l~IGDs~nD 288 (368)
.|++++|++|..--
T Consensus 115 kP~~Ivy~DDR~iH 128 (164)
T COG4996 115 KPSEIVYLDDRRIH 128 (164)
T ss_pred CcceEEEEeccccc
Confidence 89999999997743
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0039 Score=49.52 Aligned_cols=85 Identities=13% Similarity=0.137 Sum_probs=57.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
..++||+.++|+.|+++|++++++||.... .....++.+|+.--.+.|+++. ......+++. .....
T Consensus 13 ~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~---------~~~~~~l~~~-~~~~~ 82 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG---------MAAAEYLKEH-KGGKK 82 (101)
T ss_dssp TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH---------HHHHHHHHHH-TTSSE
T ss_pred CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH---------HHHHHHHHhc-CCCCE
Confidence 378999999999999999999999998644 4445567788886567777773 3344444442 33577
Q ss_pred EEEEcCCHhhHHHHHHcCC
Q 043738 279 CIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~ 297 (368)
++++|-. ...+.++++|+
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 8888865 55666677764
|
... |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0024 Score=54.64 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=59.3
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc-ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEc
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE-EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFG 283 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~-~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IG 283 (368)
..++...|..++++ .+++.+|.......+..-..+... ..+|.+...+- ..| ..+.+..+++ +++.
T Consensus 74 ~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~--h~K------V~~vrth~id----lf~e 140 (194)
T COG5663 74 AQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGL--HHK------VEAVRTHNID----LFFE 140 (194)
T ss_pred HHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcc--ccc------chhhHhhccC----cccc
Confidence 34566777778776 678888876554443333332222 12443322221 122 3445566665 8999
Q ss_pred CCH-hhHHHHHHcCCeEEEEcCCCCccccC
Q 043738 284 NSN-QTVEAAHDARMKCVAVASKHPVYELG 312 (368)
Q Consensus 284 Ds~-nDl~~A~~aG~~~I~v~~~~~~~~~~ 312 (368)
|+. |-.+.|+++|++++.++....+....
T Consensus 141 d~~~na~~iAk~~~~~vilins~ynRkp~~ 170 (194)
T COG5663 141 DSHDNAGQIAKNAGIPVILINSPYNRKPAA 170 (194)
T ss_pred ccCchHHHHHHhcCCcEEEecCcccccchH
Confidence 998 77888899999999999877766543
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0065 Score=52.09 Aligned_cols=92 Identities=16% Similarity=0.188 Sum_probs=56.5
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHc---CccccccE-EEeC-C--------CCCCCCCCHHHHHH
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSI---GIEEYFTA-IVAA-E--------DVHRGKPDPEMFVY 267 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~---gl~~~Fd~-iv~~-e--------~v~~~KP~~~~~~~ 267 (368)
..+|+.++++.++++|+++.-+|..+-. .++.++... |. .+-+. ++.+ + ++-.. +++.|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~-~lP~Gpv~~sP~~l~~al~rEvi~~--~p~~fK~ 104 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGH-NLPDGPVLLSPDSLFSALHREVISK--DPEEFKI 104 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCc-cCCCCCEEECCcchhhhhhcccccc--ChHHHHH
Confidence 3478999999999999999999998644 344555544 11 11121 2222 1 22222 3444442
Q ss_pred -----HHHHcC-CCCCcEEEEcCCHhhHHHHHHcCCe
Q 043738 268 -----AAQLLK-FIPERCIVFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 268 -----~le~lg-i~p~~~l~IGDs~nDl~~A~~aG~~ 298 (368)
+...+. ....=...+|+..+|+.+=.++|+.
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 222222 1223356789999999999999987
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0051 Score=62.89 Aligned_cols=97 Identities=21% Similarity=0.213 Sum_probs=73.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
.+.+++.+.++.|++.|++++++|+..........+.+|+ + + .-.|+-...+.+.+.-....+.++
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-~------~~~p~~K~~~v~~l~~~g~~v~~v 412 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-A------RVTPEEKAALVEALQKKGRVVAMT 412 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-e------ccCHHHHHHHHHHHHHCCCEEEEE
Confidence 7889999999999999999999999999999999999986 1 1 122333344444443334779999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
||+.||..+...+++...+ . ....||.++.+
T Consensus 413 GDg~nD~~al~~Advgia~-~------a~~~adivl~~ 443 (499)
T TIGR01494 413 GDGVNDAPALKKADVGIAM-G------AKAAADIVLLD 443 (499)
T ss_pred CCChhhHHHHHhCCCcccc-c------hHHhCCeEEec
Confidence 9999999999999876443 1 23348888865
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0068 Score=50.15 Aligned_cols=49 Identities=6% Similarity=0.053 Sum_probs=35.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH---------------HHHHHHHHcCccccccEEEeCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK---------------TLETAIDSIGIEEYFTAIVAAE 253 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---------------~~~~~l~~~gl~~~Fd~iv~~e 253 (368)
.+.+++.+.|+.+++.|+.++++|+.+.. .+..++.+.++. +|.++.+-
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~k 87 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVGK 87 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeCC
Confidence 34556778889999999999999998654 445666677766 56665543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=64.94 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=39.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~ 243 (368)
.++.|++.+.++.|++.|++++++||.+...+....+.+|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 378999999999999999999999999999999999999984
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.016 Score=51.69 Aligned_cols=84 Identities=17% Similarity=0.208 Sum_probs=56.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc--c--cEEEeCC--------CCC--CCCCCHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY--F--TAIVAAE--------DVH--RGKPDPEMFVY 267 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~--F--d~iv~~e--------~v~--~~KP~~~~~~~ 267 (368)
....|++.+||+.+.+. +.|+|.|.+....+..++..+++... + ..+.... ..+ .-|+ +..
T Consensus 44 ~~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd----L~~ 118 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP----LGV 118 (195)
T ss_pred EEeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee----cHH
Confidence 36689999999999996 99999999999999999998875321 1 1111111 011 1222 222
Q ss_pred HHHHcC--CCCCcEEEEcCCHhhHH
Q 043738 268 AAQLLK--FIPERCIVFGNSNQTVE 290 (368)
Q Consensus 268 ~le~lg--i~p~~~l~IGDs~nDl~ 290 (368)
+-.+++ .+.+++|.|+|+..-..
T Consensus 119 lw~~l~~~~~~~ntiiVDd~p~~~~ 143 (195)
T TIGR02245 119 IWALLPEFYSMKNTIMFDDLRRNFL 143 (195)
T ss_pred hhhhcccCCCcccEEEEeCCHHHHh
Confidence 223444 37799999999996543
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.011 Score=55.11 Aligned_cols=48 Identities=17% Similarity=0.259 Sum_probs=43.0
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE 253 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e 253 (368)
|.+.+-|.+|++.|.-+++-|.|.++++...++.+++..+||.++++.
T Consensus 145 ~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 145 PAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred hHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCC
Confidence 445577889999999999999999999999999999999999999864
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0084 Score=58.94 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=87.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCC--ChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTH--PRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~--~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
+.+.....++.+.+.+.|.+|+++|.. +...++..+...|.+.+---++.+.+....|-....|..+++..++++...
T Consensus 98 Lypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w 177 (635)
T COG5610 98 LYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKW 177 (635)
T ss_pred eeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhhe
Confidence 355566788999999999999999996 667788888888877554557888888888999999999999999999999
Q ss_pred EEEcCCH-hhHHHHHHcCCeEEEE
Q 043738 280 IVFGNSN-QTVEAAHDARMKCVAV 302 (368)
Q Consensus 280 l~IGDs~-nDl~~A~~aG~~~I~v 302 (368)
+.+||.- .|..++.+.|+.+...
T Consensus 178 ~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 178 IHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred EEecCchhhhhcCccccchhHHHH
Confidence 9999988 7999999999987653
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.047 Score=51.43 Aligned_cols=88 Identities=13% Similarity=0.155 Sum_probs=61.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++||+.++|+.|++.|++++++||+... .....++.+|+....+.++++. ......+++......++
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~v 88 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA---------LCAARLLRQPPDAPKAV 88 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH---------HHHHHHHHhhCcCCCEE
Confidence 46789999999999999999999996533 3345667788875556666653 34445555544445789
Q ss_pred EEEcCCHhhHHHHHHcCCeEE
Q 043738 280 IVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I 300 (368)
+++|+. ...+.++..|+..+
T Consensus 89 ~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 89 YVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred EEEcCH-HHHHHHHHCCCEEe
Confidence 999985 23455677787654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.019 Score=54.66 Aligned_cols=101 Identities=11% Similarity=0.172 Sum_probs=73.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CccccccEEEeCCCCC-----CCCCC-------------
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---GIEEYFTAIVAAEDVH-----RGKPD------------- 261 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---gl~~~Fd~iv~~e~v~-----~~KP~------------- 261 (368)
.-.|....+|+.|+++|.++.++||++-.++..-+..+ .+.++||.|+.-.+-+ ..+|-
T Consensus 240 ~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wd 319 (510)
T KOG2470|consen 240 ERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWD 319 (510)
T ss_pred hccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhh
Confidence 34567888999999999999999999998887766654 4667899876532100 01110
Q ss_pred ------------HHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHH-HcCCeEEEEc
Q 043738 262 ------------PEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAH-DARMKCVAVA 303 (368)
Q Consensus 262 ------------~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~-~aG~~~I~v~ 303 (368)
...+...++.-|..-.++++|||.. +|+.... +.|+.+-++-
T Consensus 320 kv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 320 KVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 1124566777788889999999999 8987776 8898876653
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.068 Score=50.04 Aligned_cols=141 Identities=17% Similarity=0.185 Sum_probs=81.0
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHH---HHHHHH-cCccccccEEEeCCCC-----CCCCC-------CHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTL---ETAIDS-IGIEEYFTAIVAAEDV-----HRGKP-------DPEMFV 266 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~---~~~l~~-~gl~~~Fd~iv~~e~v-----~~~KP-------~~~~~~ 266 (368)
.++||+.++|+.|+++|++++++||+++..- ...++. .+++...+.|+++... ...+| -.+.+.
T Consensus 24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~ 103 (269)
T COG0647 24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLK 103 (269)
T ss_pred ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcchH
Confidence 7889999999999999999999999865543 345555 5666677888887431 11111 124466
Q ss_pred HHHHHcCCC----C-C---cEEEEcCCH----hhHHH---HHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhc
Q 043738 267 YAAQLLKFI----P-E---RCIVFGNSN----QTVEA---AHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 267 ~~le~lgi~----p-~---~~l~IGDs~----nDl~~---A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
..++.+|+. . . .++.+|... .++.. +...|+.+|+.+....... .+-.++..-.+ ...+++
T Consensus 104 ~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~---~~g~~pgaGai-~~~~~~ 179 (269)
T COG0647 104 EELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPT---ERGLRPGAGAI-AALLEQ 179 (269)
T ss_pred HHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccC---CCCCccCcHHH-HHHHHH
Confidence 677776641 1 1 466777432 23222 2234777777663322211 11222333334 334555
Q ss_pred cccccccccCCCCCCc
Q 043738 332 LADIESTEFGSVEPEM 347 (368)
Q Consensus 332 L~d~~~~~~~~~~~~~ 347 (368)
+..-++.-.|-|.|+.
T Consensus 180 ~tg~~~~~~GKP~~~i 195 (269)
T COG0647 180 ATGREPTVIGKPSPAI 195 (269)
T ss_pred hhCCcccccCCCCHHH
Confidence 5555665667666553
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.022 Score=52.89 Aligned_cols=36 Identities=22% Similarity=0.384 Sum_probs=31.2
Q ss_pred HHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 209 KEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 209 ~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
.+.++.++++|++++++|+.+...+...++.+|+..
T Consensus 22 ~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 22 KEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED 57 (256)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 467778888999999999999999999999998753
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.044 Score=60.48 Aligned_cols=49 Identities=12% Similarity=0.302 Sum_probs=35.1
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhh
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDEL 324 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL 324 (368)
.+..+++|||+.||+.|.+.|.++ |+|.|.........+|+-+.-+.=|
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVG-VGIsG~EGmQAvmsSD~AIaqFrfL 841 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVG-VGISGQEGMQAVMSSDFAIAQFRFL 841 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcC-eeeccchhhhhhhcccchHHHHHHH
Confidence 456799999999999999998765 5666665554444577765554433
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.028 Score=56.35 Aligned_cols=91 Identities=13% Similarity=0.151 Sum_probs=72.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
.+.||++|-+.+|++.|++.+.+|+.++-....+.+..|++++... .+ |+--..+.++.+-.-.=+.+.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe---------at--PEdK~~~I~~eQ~~grlVAMt 515 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE---------AT--PEDKLALIRQEQAEGRLVAMT 515 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc---------CC--hHHHHHHHHHHHhcCcEEEEc
Confidence 5679999999999999999999999999999999999999876533 22 344445555555566678999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcC
Q 043738 283 GNSNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~ 304 (368)
||+.||..+..++.....|-++
T Consensus 516 GDGTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 516 GDGTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred CCCCCcchhhhhcchhhhhccc
Confidence 9999999999999876555433
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.97 Score=43.85 Aligned_cols=79 Identities=18% Similarity=0.198 Sum_probs=57.3
Q ss_pred EEEEcCCChH--HHHHHHHHcCccccc--cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCC
Q 043738 222 MALVSTHPRK--TLETAIDSIGIEEYF--TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 222 vaivSn~~~~--~~~~~l~~~gl~~~F--d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
-++||+..-. .++.+| +||...| +.|+++..+++ ...|+++.++||- .-.-++|||+.-.-.+|++..|
T Consensus 373 nVlvTttqLipalaKvLL--~gLg~~fpiENIYSa~kiGK----escFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~ 445 (468)
T KOG3107|consen 373 NVLVTTTQLIPALAKVLL--YGLGSSFPIENIYSATKIGK----ESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNM 445 (468)
T ss_pred EEEEeccchhHHHHHHHH--HhcCCcccchhhhhhhhccH----HHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCC
Confidence 4667765322 222333 3555555 57888776643 7899999999998 6778999999999999999999
Q ss_pred eEEEEcCCCC
Q 043738 298 KCVAVASKHP 307 (368)
Q Consensus 298 ~~I~v~~~~~ 307 (368)
.+.-++....
T Consensus 446 PfwrI~~h~D 455 (468)
T KOG3107|consen 446 PFWRISSHSD 455 (468)
T ss_pred ceEeeccCcc
Confidence 9888875443
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.18 Score=42.76 Aligned_cols=95 Identities=15% Similarity=0.055 Sum_probs=55.8
Q ss_pred ccHHHHHHHHHh-CC-CcEEEEcCCChH--------HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC-C
Q 043738 206 TGSKEFVNILMH-YK-IPMALVSTHPRK--------TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK-F 274 (368)
Q Consensus 206 pg~~elL~~Lk~-~G-i~vaivSn~~~~--------~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg-i 274 (368)
|....-++++++ .| ..++++||+... ..+.+-.+.|+. +-.....++-...+.+.+....-+ .
T Consensus 64 p~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIp------VlRHs~kKP~ct~E~~~y~~~Nshv~ 137 (190)
T KOG2961|consen 64 PPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIP------VLRHSVKKPACTAEEVEYHFGNSHVC 137 (190)
T ss_pred chhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCc------eEeecccCCCccHHHHHHHhCCcccC
Confidence 334444555554 23 678889886221 222333344544 222222222223444444433323 4
Q ss_pred CCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCC
Q 043738 275 IPERCIVFGNSN-QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 275 ~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~ 306 (368)
.+++++||||.. .||-+|...|-..||...+-
T Consensus 138 ~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 138 TSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred ChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 789999999999 89999999999999987543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.046 Score=48.62 Aligned_cols=36 Identities=11% Similarity=0.163 Sum_probs=30.0
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~g 241 (368)
+.+.+.|++|++.|++++++|+.....+..+++.++
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 345578889999999999999999998888888643
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.096 Score=55.50 Aligned_cols=120 Identities=17% Similarity=0.216 Sum_probs=78.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc--EEEeCCCCC------------------CCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVAAEDVH------------------RGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~~e~v~------------------~~KP~ 261 (368)
.+.+||+++.++.|++.|+.+-+||+.+-...+.+....|+..-=+ .++.+.++. +.-|.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 4889999999999999999999999999999999999999753322 222222211 11121
Q ss_pred -HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE-EcCCCCccccCCCcEEE--cCchhhhH
Q 043738 262 -PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA-VASKHPVYELGAADLVV--RHLDELSV 326 (368)
Q Consensus 262 -~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~-v~~~~~~~~~~~ad~vv--~sl~eL~~ 326 (368)
...+.+.+.+.| +=+.+-||+.||-.+.++|.++..| +.+..-.+ ..+|.|+ ++|..+..
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAK--EaSDIIi~DDNFssIVk 789 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAK--EASDIIILDDNFSSIVK 789 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchhccccchhhhh--hhCCeEEEcCchHHHHH
Confidence 122333333322 3356679999999999999987655 22332222 2478777 45555543
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.027 Score=58.14 Aligned_cols=124 Identities=15% Similarity=0.173 Sum_probs=77.7
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCc----------------------------cccccEEEeCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGI----------------------------EEYFTAIVAAE 253 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl----------------------------~~~Fd~iv~~e 253 (368)
.++-.+++..|+.|++.|++++.+||..-+....+.+..++ ......++.++
T Consensus 657 DkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~ 736 (1051)
T KOG0210|consen 657 DKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGE 736 (1051)
T ss_pred HHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCc
Confidence 36677888899999999999999998654444333322211 11111222221
Q ss_pred C---------------------C----CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc
Q 043738 254 D---------------------V----HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV 308 (368)
Q Consensus 254 ~---------------------v----~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~ 308 (368)
. + ..+..|+++.+.+-++-| .++.+|||+-||+.|.++|..+ |++.+....
T Consensus 737 Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGk 812 (1051)
T KOG0210|consen 737 SLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVG-IGIVGKEGK 812 (1051)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC---ceEEEEcCCCccchheeecccc-eeeeccccc
Confidence 0 0 112233455555555555 7899999999999999988654 455555554
Q ss_pred cccCCCcEEEcCchhhhHHHH
Q 043738 309 YELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 309 ~~~~~ad~vv~sl~eL~~~~l 329 (368)
..--+||+-|.-|..+...++
T Consensus 813 QASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 813 QASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred ccchhccccHHHHHHHHHHhh
Confidence 444569998888887766554
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.22 Score=50.36 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=46.1
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCcccccc--------EEEeCCCCCCCCCCHHH-HHHHHHHcCCCCCcEE
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDS-IGIEEYFT--------AIVAAEDVHRGKPDPEM-FVYAAQLLKFIPERCI 280 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~gl~~~Fd--------~iv~~e~v~~~KP~~~~-~~~~le~lgi~p~~~l 280 (368)
.++..++.| +++++|..+..+++..++. +|.+...- ..+++--. ++...+. ...+.+.+|- ....+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~--G~n~~ek~~~rl~~~~g~-~~~~v 176 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIR--GTDVDQSVANRVANLFVD-ERPQL 176 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEe--cCccHHHHHHHHHHHhCc-cCcee
Confidence 566677788 9999999999999999997 77543210 22222111 2222333 4455555663 24477
Q ss_pred EEcCCHhhHH
Q 043738 281 VFGNSNQTVE 290 (368)
Q Consensus 281 ~IGDs~nDl~ 290 (368)
-+||+..|-.
T Consensus 177 g~~~~~~~~~ 186 (498)
T PLN02499 177 GLGRISASSS 186 (498)
T ss_pred cccCCcccch
Confidence 8888775533
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.35 Score=44.75 Aligned_cols=140 Identities=14% Similarity=0.166 Sum_probs=79.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcC---CChHHHHHHHHHcCccccccEEEeCCCC-----CCCCCC-------HHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVST---HPRKTLETAIDSIGIEEYFTAIVAAEDV-----HRGKPD-------PEMFVY 267 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn---~~~~~~~~~l~~~gl~~~Fd~iv~~e~v-----~~~KP~-------~~~~~~ 267 (368)
.+.|++.++|+.|+++|++++++|| .....+...++.+|+....+.|+++... ...++. ...+..
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l~~ 96 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGEEGLKE 96 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhHHH
Confidence 3457899999999999999999998 4566777788889988777778876321 000111 134666
Q ss_pred HHHHcCCC----CCcEEEEcCC-H---hhHHHHH---HcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhcccccc
Q 043738 268 AAQLLKFI----PERCIVFGNS-N---QTVEAAH---DARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADIE 336 (368)
Q Consensus 268 ~le~lgi~----p~~~l~IGDs-~---nDl~~A~---~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~d~~ 336 (368)
.++..|+. ..+.|++|.. . .++..|. +.|+..+..+....... .+-.+.....+... +.....-+
T Consensus 97 ~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D~~~~~---~~~~~~~~G~~~~~-i~~~~~~~ 172 (249)
T TIGR01457 97 AIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGDLAIPT---ERGLLPGNGSLITV-LEVATGVK 172 (249)
T ss_pred HHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCCCCCCC---CCCCCCCcHHHHHH-HHHHhCCC
Confidence 77776753 2355777643 2 2333222 45888666553332221 11123344444322 33323334
Q ss_pred ccccCCCCCC
Q 043738 337 STEFGSVEPE 346 (368)
Q Consensus 337 ~~~~~~~~~~ 346 (368)
....+-|.|+
T Consensus 173 ~~~~gKP~~~ 182 (249)
T TIGR01457 173 PVYIGKPNAI 182 (249)
T ss_pred ccccCCChHH
Confidence 4445555554
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.19 Score=45.95 Aligned_cols=79 Identities=13% Similarity=0.180 Sum_probs=60.5
Q ss_pred EEEEcCCChHHHHHHHH--HcCccccc--cEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCC
Q 043738 222 MALVSTHPRKTLETAID--SIGIEEYF--TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 222 vaivSn~~~~~~~~~l~--~~gl~~~F--d~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
-++||++ ..+-.+.+ -+++..+| +.|+++-.++ |...|+.+.+++|-+...-++|||+..--.+|+..++
T Consensus 178 NvLVTs~--qLVPaLaKcLLy~L~~~f~ieNIYSa~kvG----K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~w 251 (274)
T TIGR01658 178 NVLVTSG--QLIPSLAKCLLFRLDTIFRIENVYSSIKVG----KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNW 251 (274)
T ss_pred EEEEEcC--ccHHHHHHHHHhccCCccccccccchhhcc----hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCC
Confidence 3566665 33333333 34677776 5788887654 3789999999999988999999999999999999999
Q ss_pred eEEEEcCCC
Q 043738 298 KCVAVASKH 306 (368)
Q Consensus 298 ~~I~v~~~~ 306 (368)
+++-|....
T Consensus 252 PFw~I~~h~ 260 (274)
T TIGR01658 252 PFVKIDLHP 260 (274)
T ss_pred CeEEeecCC
Confidence 999887543
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.29 Score=44.14 Aligned_cols=88 Identities=9% Similarity=0.165 Sum_probs=45.3
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccc----cccEEEeCCCCCCCCCCHHHHHHHHHHc-CCCC
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEE----YFTAIVAAEDVHRGKPDPEMFVYAAQLL-KFIP 276 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~----~Fd~iv~~e~v~~~KP~~~~~~~~le~l-gi~p 276 (368)
.|.-...|..++.. -..|++-+... .....+...|+.- -|-.++.... ++++ ....+++.. ....
T Consensus 136 lpre~aaLa~~rEy--seti~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~-gKg~----Aa~~ll~~y~rl~~ 208 (274)
T COG3769 136 LPREQAALAMLREY--SETIIWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASA-GKGQ----AANWLLETYRRLGG 208 (274)
T ss_pred CChHHhHHHHHHHh--hhheeecccchHHHHHHHHHHhcCceEEeccceEEEecccc-CccH----HHHHHHHHHHhcCc
Confidence 34455566677765 34444433222 1334555666552 1223333322 2333 333333332 2233
Q ss_pred Cc-EEEEcCCHhhHHHHHHcCCeE
Q 043738 277 ER-CIVFGNSNQTVEAAHDARMKC 299 (368)
Q Consensus 277 ~~-~l~IGDs~nDl~~A~~aG~~~ 299 (368)
.+ ++.+|||.||+.+..-....+
T Consensus 209 ~r~t~~~GDg~nD~Pl~ev~d~Af 232 (274)
T COG3769 209 ARTTLGLGDGPNDAPLLEVMDYAF 232 (274)
T ss_pred eeEEEecCCCCCcccHHHhhhhhe
Confidence 44 899999999998887655433
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.15 Score=42.52 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=71.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCC--ChH----HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTH--PRK----TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~--~~~----~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
+.+.|++...+++|.+. +.++++|.. ... -.+++.+.+++-.+-..++|+.. |+-
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnK------------------niv 127 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNK------------------NIV 127 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCC------------------CeE
Confidence 67889999999999987 899999876 222 33455666776666677777742 111
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhcc
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L 332 (368)
.--++|+|++..++... |++ |+....+...+- --..+.++.|+-..++.+|
T Consensus 128 -kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~nen--RF~Rv~~W~e~eq~ll~~~ 178 (180)
T COG4502 128 -KADILIDDNPLNLENFK--GNK-ILFDAHHNKNEN--RFVRVRDWYEAEQALLESL 178 (180)
T ss_pred -EeeEEecCCchhhhhcc--Cce-EEEecccccCcc--ceeeeccHHHHHHHHHHhh
Confidence 12378999999988775 554 444444443331 2356788999877777665
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.18 Score=46.53 Aligned_cols=91 Identities=19% Similarity=0.325 Sum_probs=53.8
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc--EEEe------------C--CC-CC-CCCCCH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVA------------A--ED-VH-RGKPDP 262 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~------------~--e~-v~-~~KP~~ 262 (368)
...+++|+.+|++.|.++++|+.|+|.+-...++..+++.+.. ++ .|++ + +. +. ..| +.
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~--~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NK-n~ 164 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF--HPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNK-NE 164 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE-EEE-TTSBEEEE-SS---TT-H-HH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC--CCCeEEEeeeEEECCcceEeecCCCceEEeeC-Cc
Confidence 3689999999999999999999999999999999999987643 22 1111 1 11 11 111 11
Q ss_pred HHHHHHHHHc-CC-CCCcEEEEcCCHhhHHHHHHc
Q 043738 263 EMFVYAAQLL-KF-IPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 263 ~~~~~~le~l-gi-~p~~~l~IGDs~nDl~~A~~a 295 (368)
..+. -...+ .+ ...+++..||+..|+.|+..+
T Consensus 165 ~~l~-~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 165 SALE-DSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HHHT-THHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred cccc-CchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 1121 11111 22 346799999999999998776
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.97 Score=41.85 Aligned_cols=101 Identities=13% Similarity=0.230 Sum_probs=59.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHH---HHHHHcCccccccEEEeCCCC--------CCCC---CCHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLE---TAIDSIGIEEYFTAIVAAEDV--------HRGK---PDPEMFVYA 268 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~---~~l~~~gl~~~Fd~iv~~e~v--------~~~K---P~~~~~~~~ 268 (368)
.+.||+.++++.|++.|++++++||....... ..+..+|+.---+.++++... ...+ --...+...
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~ 96 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHE 96 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHH
Confidence 45799999999999999999999998765444 444556775445566665210 0000 001234455
Q ss_pred HHHcCCC----CCcEEEEcCCHh-h---HHHHH---HcCCeEEEEc
Q 043738 269 AQLLKFI----PERCIVFGNSNQ-T---VEAAH---DARMKCVAVA 303 (368)
Q Consensus 269 le~lgi~----p~~~l~IGDs~n-D---l~~A~---~aG~~~I~v~ 303 (368)
++..|+. ..+.|++|...+ + +..|. +.|...+..+
T Consensus 97 l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n 142 (248)
T PRK10444 97 LYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATN 142 (248)
T ss_pred HHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEEC
Confidence 5555543 235677776542 2 22222 3477766655
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.75 E-value=0.29 Score=48.15 Aligned_cols=73 Identities=16% Similarity=0.036 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEcCCHhhHHHHHH-----cCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHH
Q 043738 258 GKPDPEMFVYAAQLLKFIPER---CIVFGNSNQTVEAAHD-----ARMKCVAVASKHPVYELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~---~l~IGDs~nDl~~A~~-----aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l 329 (368)
+--|...++.++++++++..+ .++|||..||..|.+. .|+.+ .|..+. . ...|.|.+++-.|+. ..|
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I-~Vgn~~--~-~t~A~y~L~dp~eV~-~~L 373 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGI-LVSSVP--K-ESNAFYSLRDPSEVM-EFL 373 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEE-EEecCC--C-CccceEEcCCHHHHH-HHH
Confidence 445689999999999998653 3899999999999996 35543 333221 1 124899999999984 445
Q ss_pred hccccc
Q 043738 330 KNLADI 335 (368)
Q Consensus 330 ~~L~d~ 335 (368)
+.|+..
T Consensus 374 ~~L~~~ 379 (384)
T PLN02580 374 KSLVTW 379 (384)
T ss_pred HHHHHh
Confidence 655543
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=92.19 E-value=0.48 Score=44.08 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=39.1
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcCccccccEEEeC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIGIEEYFTAIVAA 252 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~gl~~~Fd~iv~~ 252 (368)
.+.|++.++|+.|+++|++++++||.+.. .....++.+|+.--.+.++++
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 36789999999999999999999997555 356667778876444566654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.09 E-value=0.12 Score=54.65 Aligned_cols=113 Identities=18% Similarity=0.155 Sum_probs=74.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc----ccc--------------------EEEeCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE----YFT--------------------AIVAAEDVHR 257 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~----~Fd--------------------~iv~~e~v~~ 257 (368)
.++.+.+.+.+..+++.|++++++|+......+.+.+..|+-. .+. .++.+.+..
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~- 667 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP- 667 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-
Confidence 4778888999999999999999999998888888888777421 111 123333321
Q ss_pred CCCCHHHHHHHHHHcC------CCC--------------CcEEEEcCCHhhHHHHHHcCCeEEE-EcCCCCccccCCCcE
Q 043738 258 GKPDPEMFVYAAQLLK------FIP--------------ERCIVFGNSNQTVEAAHDARMKCVA-VASKHPVYELGAADL 316 (368)
Q Consensus 258 ~KP~~~~~~~~le~lg------i~p--------------~~~l~IGDs~nDl~~A~~aG~~~I~-v~~~~~~~~~~~ad~ 316 (368)
.-.++-+.++++... -.| +-+-+.||+.||-.+.++|.++++| +.+..-.+ .+||.
T Consensus 668 -~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsK--qAADm 744 (1019)
T KOG0203|consen 668 -DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK--QAADM 744 (1019)
T ss_pred -ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHH--hhcce
Confidence 112344555554432 012 3356789999999999999988777 44433222 24776
Q ss_pred EE
Q 043738 317 VV 318 (368)
Q Consensus 317 vv 318 (368)
|.
T Consensus 745 IL 746 (1019)
T KOG0203|consen 745 IL 746 (1019)
T ss_pred EE
Confidence 65
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=91.01 E-value=0.67 Score=50.55 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=54.5
Q ss_pred CCCCCCHHHHHHHHH---HcCCCCCcEEEEcCCHhhHHHHHHcCC-------------eEEEEcCCCCccccCCCcEEEc
Q 043738 256 HRGKPDPEMFVYAAQ---LLKFIPERCIVFGNSNQTVEAAHDARM-------------KCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 256 ~~~KP~~~~~~~~le---~lgi~p~~~l~IGDs~nDl~~A~~aG~-------------~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
..+-.|...++.+++ .+|+.++.+++|||+.||..|.+.++- -+|-|..+ -..|.|-++
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~-----~S~A~y~L~ 832 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK-----PSKAKYYLD 832 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC-----CccCeEecC
Confidence 344556788888874 468999999999999999999998862 12223211 134889999
Q ss_pred CchhhhHHHHhcccccccc
Q 043738 320 HLDELSVVDLKNLADIEST 338 (368)
Q Consensus 320 sl~eL~~~~l~~L~d~~~~ 338 (368)
+..|+ ..+|+.|++....
T Consensus 833 d~~eV-~~lL~~L~~~~~~ 850 (854)
T PLN02205 833 DTAEI-VRLMQGLASVSEQ 850 (854)
T ss_pred CHHHH-HHHHHHHHhcchh
Confidence 99888 4556777765544
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.79 Score=44.66 Aligned_cols=95 Identities=16% Similarity=0.254 Sum_probs=59.2
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCC------------hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHP------------RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~------------~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
+++.+..=|+.+.+.|+.+++.||.. ..-++.+...+++. |........-...||-..++....+.
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vP--i~~~~A~~~~~yRKP~tGMwe~~~~~ 182 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVP--IQLLAAIIKGKYRKPSTGMWEFLKRL 182 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCc--eEEeeeccCCcccCcchhHHHHHHHH
Confidence 34444556777888899999888752 22334444555544 33222222335689999999888876
Q ss_pred cC----CCCCcEEEEcCC---------------HhhHHHHHHcCCeEE
Q 043738 272 LK----FIPERCIVFGNS---------------NQTVEAAHDARMKCV 300 (368)
Q Consensus 272 lg----i~p~~~l~IGDs---------------~nDl~~A~~aG~~~I 300 (368)
++ |.-..++|+||- ..|+.-|.++|++..
T Consensus 183 ~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 183 ENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred hhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 64 334455677763 247888999998754
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.58 E-value=0.47 Score=46.74 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=30.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~ 240 (368)
.+.+++++.|+.|.+. .+++|||+.....+..++.-.
T Consensus 141 ~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~ 177 (384)
T PLN02580 141 LMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLT 177 (384)
T ss_pred cCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCC
Confidence 4556788899999888 689999999988888877643
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=90.36 E-value=2.2 Score=39.57 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=46.3
Q ss_pred CCcEEEEcCCChHHHHHHHH---HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc
Q 043738 219 KIPMALVSTHPRKTLETAID---SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295 (368)
Q Consensus 219 Gi~vaivSn~~~~~~~~~l~---~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a 295 (368)
-+++++||......-+..++ ..|+. +|..+.-... +|. .+++.++-. +||+|....++.|. .
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLgG~----~K~----~vL~~~~ph----IFFDDQ~~H~~~a~-~ 250 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLGGL----PKG----PVLKAFRPH----IFFDDQDGHLESAS-K 250 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhCCC----chh----HHHHhhCCC----EeecCchhhhhHhh-c
Confidence 48899999876554455554 44554 5544443322 222 344444322 99999999999998 7
Q ss_pred CCeEEEEcCC
Q 043738 296 RMKCVAVASK 305 (368)
Q Consensus 296 G~~~I~v~~~ 305 (368)
++.++.|..+
T Consensus 251 ~vps~hVP~g 260 (264)
T PF06189_consen 251 VVPSGHVPYG 260 (264)
T ss_pred CCCEEeccCC
Confidence 7888887754
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=89.76 E-value=3 Score=38.09 Aligned_cols=51 Identities=16% Similarity=0.290 Sum_probs=37.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCCh---HHHHHHHHH-cCccccccEEEeCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPR---KTLETAIDS-IGIEEYFTAIVAAE 253 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~---~~~~~~l~~-~gl~~~Fd~iv~~e 253 (368)
.++|++.++|+.++++|+++.++||... ......+.. +|+.-..+.++++.
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~ 68 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG 68 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH
Confidence 5578999999999999999999997653 333344444 77765667777763
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=89.49 E-value=0.17 Score=43.18 Aligned_cols=14 Identities=21% Similarity=0.337 Sum_probs=12.9
Q ss_pred ceEEEEeccCcccc
Q 043738 118 WLGAIFEWEGVIIE 131 (368)
Q Consensus 118 ik~VIFDlDGTLid 131 (368)
+|+|+||+||||++
T Consensus 1 ~~~~~~D~Dgtl~~ 14 (154)
T TIGR01670 1 IRLLILDVDGVLTD 14 (154)
T ss_pred CeEEEEeCceeEEc
Confidence 57899999999997
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=88.26 E-value=0.26 Score=42.96 Aligned_cols=17 Identities=18% Similarity=0.315 Sum_probs=15.0
Q ss_pred CceEEEEeccCccccCc
Q 043738 117 GWLGAIFEWEGVIIEDN 133 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~ 133 (368)
.+|++|||+||||.|..
T Consensus 6 ~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGR 22 (169)
T ss_pred cCeEEEEeCceeeECCe
Confidence 48999999999999863
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.57 E-value=1.1 Score=43.90 Aligned_cols=71 Identities=15% Similarity=0.088 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHcCCCC---CcEEEEcCCHhhHHHHHHcC-C---eEEEEcCCCCccccCCCcEEEcCchhhhHHHHhccc
Q 043738 261 DPEMFVYAAQLLKFIP---ERCIVFGNSNQTVEAAHDAR-M---KCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLA 333 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p---~~~l~IGDs~nDl~~A~~aG-~---~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~ 333 (368)
|...++.+++.++... .-.+||||..+|-.|++.+. + -.|.|... . . ...|.|.+++..|+. ..|+.|+
T Consensus 284 KG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~-~-k-~T~A~y~L~dp~eV~-~fL~~L~ 359 (366)
T PLN03017 284 KGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKF-P-K-DTDASYSLQDPSEVM-DFLARLV 359 (366)
T ss_pred HHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCC-C-C-CCcceEeCCCHHHHH-HHHHHHH
Confidence 4566777777776542 35899999999988877662 1 23444321 1 1 135899999999984 4556665
Q ss_pred cc
Q 043738 334 DI 335 (368)
Q Consensus 334 d~ 335 (368)
+.
T Consensus 360 ~~ 361 (366)
T PLN03017 360 EW 361 (366)
T ss_pred HH
Confidence 43
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=86.94 E-value=2.8 Score=42.16 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=69.0
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEc
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED----VHRGKPDPEMFVYAAQLLKFIPERCIVFG 283 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~----v~~~KP~~~~~~~~le~lgi~p~~~l~IG 283 (368)
...++..|+.+|+-+++.|-.....++..+.+.+ |.++.-++ .....|+.+-++.++++|++..+..+|++
T Consensus 260 fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiD 334 (574)
T COG3882 260 FQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFID 334 (574)
T ss_pred HHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEec
Confidence 5678999999999999999988888888887654 22333322 23578999999999999999999999999
Q ss_pred CCHhhHHHHHHcCC
Q 043738 284 NSNQTVEAAHDARM 297 (368)
Q Consensus 284 Ds~nDl~~A~~aG~ 297 (368)
|++-..+-.+.-+-
T Consensus 335 D~p~ErE~vk~~~~ 348 (574)
T COG3882 335 DNPAERELVKRELP 348 (574)
T ss_pred CCHHHHHHHHhcCc
Confidence 99988887777664
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=86.89 E-value=0.95 Score=44.11 Aligned_cols=72 Identities=14% Similarity=0.126 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHcCCCCC---cEEEEcCCHhhHHHHHHc-----CCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhcc
Q 043738 261 DPEMFVYAAQLLKFIPE---RCIVFGNSNQTVEAAHDA-----RMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~---~~l~IGDs~nDl~~A~~a-----G~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L 332 (368)
|...+..+++.++..-. -.+||||..+|-.|+..+ |+ .|.|.... ....|+|.+++-.++. ..|+.|
T Consensus 270 KG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~---k~T~A~y~L~dp~eV~-~~L~~L 344 (354)
T PLN02151 270 KGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYA---KETNASYSLQEPDEVM-EFLERL 344 (354)
T ss_pred HHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCC---CCCcceEeCCCHHHHH-HHHHHH
Confidence 34556666666654322 279999999998887754 32 23343211 1124899999999994 455666
Q ss_pred ccccc
Q 043738 333 ADIES 337 (368)
Q Consensus 333 ~d~~~ 337 (368)
++...
T Consensus 345 ~~~~~ 349 (354)
T PLN02151 345 VEWKQ 349 (354)
T ss_pred HHhhh
Confidence 65443
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=86.83 E-value=1.4 Score=48.16 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=29.0
Q ss_pred CccHHHHHHHH-HhCCCcEEEEcCCChHHHHHHHHHc
Q 043738 205 RTGSKEFVNIL-MHYKIPMALVSTHPRKTLETAIDSI 240 (368)
Q Consensus 205 ~pg~~elL~~L-k~~Gi~vaivSn~~~~~~~~~l~~~ 240 (368)
.+++.++|+.| ++.|..++|+|+.....++.++...
T Consensus 618 ~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 618 SSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 35567888887 6678999999999999988888653
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=83.71 E-value=1.9 Score=40.23 Aligned_cols=41 Identities=20% Similarity=0.318 Sum_probs=36.2
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF 246 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F 246 (368)
+.+.+.|+.|++.|++++++||.+...+...++.+|+..++
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 45678999999999999999999999999999999987654
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=83.49 E-value=3.4 Score=39.76 Aligned_cols=86 Identities=13% Similarity=0.217 Sum_probs=58.0
Q ss_pred ccCccHHHHHHHHHhC----CCcEEEEcCCC---hHH-HHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 203 RLRTGSKEFVNILMHY----KIPMALVSTHP---RKT-LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~----Gi~vaivSn~~---~~~-~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
.+.||+.++++.|+.. |+++.++||.. ... ...+.+++|+.--.+.++++. ......+++++
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~~~- 85 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNKYE- 85 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHHcC-
Confidence 4478899999999998 99999999986 333 333447888763334444442 23445555543
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
..+++||.+. -.+.++..|+..+.
T Consensus 86 --~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 86 --KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred --CceEEEeChH-HHHHHHHcCCcccc
Confidence 3689999764 47777789987653
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.17 E-value=0.66 Score=39.62 Aligned_cols=17 Identities=18% Similarity=0.306 Sum_probs=15.0
Q ss_pred CceEEEEeccCccccCc
Q 043738 117 GWLGAIFEWEGVIIEDN 133 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~ 133 (368)
++|++|||+||||+|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 48999999999999854
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.61 E-value=3.6 Score=38.06 Aligned_cols=42 Identities=10% Similarity=0.203 Sum_probs=37.0
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
.+.+...+.|++++++|+++++.|+.+...+...++.+++..
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 455677899999999999999999999999999999998764
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.45 E-value=4.3 Score=43.47 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=35.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~ 243 (368)
.++.++.++.++.|.+.+.+++.+||.+.-..-...+.+|+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 477899999999999999999999998877777777766653
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=81.05 E-value=8 Score=37.85 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHc----CCCCCcEEEEcCCH-----hhHHHHHHcCCeEEEEcCCC
Q 043738 261 DPEMFVYAAQLL----KFIPERCIVFGNSN-----QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 261 ~~~~~~~~le~l----gi~p~~~l~IGDs~-----nDl~~A~~aG~~~I~v~~~~ 306 (368)
|..+...+-+.+ ++.+++|+.|||.. ||. .|+.+| .++||+++.
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDf-kaR~a~-~t~WIasP~ 402 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDF-KARLAC-TTAWIASPQ 402 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcch-hhhhhc-eeeEecCHH
Confidence 466777777777 89999999999954 666 445555 478887654
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=80.28 E-value=0.84 Score=36.04 Aligned_cols=17 Identities=24% Similarity=0.593 Sum_probs=12.8
Q ss_pred EEEeccCccccCcchHH
Q 043738 121 AIFEWEGVIIEDNPDLE 137 (368)
Q Consensus 121 VIFDlDGTLid~~~~i~ 137 (368)
++||+||||++....+.
T Consensus 1 ~l~D~dGvl~~g~~~ip 17 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIP 17 (101)
T ss_dssp EEEESTTTSEETTEE-T
T ss_pred CEEeCccEeEeCCCcCc
Confidence 68999999998664433
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 368 | ||||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 2e-12 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 3e-08 | ||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 9e-08 | ||
| 4eek_A | 259 | Crystal Structure Of Had Family Hydrolase Dr_1622 F | 6e-07 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 7e-07 | ||
| 4ex6_A | 237 | Crystal Structure Of The Alnumycin P Phosphatase Al | 2e-06 | ||
| 1te2_A | 226 | Putative Phosphatase Ynic From Escherichia Coli K12 | 4e-06 | ||
| 1o03_A | 221 | Structure Of Pentavalent Phosphorous Intermediate O | 6e-06 | ||
| 1lvh_A | 221 | The Structure Of Phosphorylated Beta-phosphoglucomu | 1e-05 | ||
| 3fm9_A | 221 | Analysis Of The Structural Determinants Underlying | 1e-05 | ||
| 2hsz_A | 243 | Crystal Structure Of A Predicted Phosphoglycolate P | 4e-05 | ||
| 2w4m_A | 270 | The Crystal Structure Of Human N-Acetylneuraminic A | 4e-05 | ||
| 3l5k_A | 250 | The Crystal Structure Of Human Haloacid Dehalogenas | 4e-05 | ||
| 3s6j_A | 233 | The Crystal Structure Of A Hydrolase From Pseudomon | 7e-05 | ||
| 2gfh_A | 260 | Crystal Structure Of A N-acetylneuraminic Acid Phos | 4e-04 | ||
| 3d6j_A | 225 | Crystal Structure Of Putative Haloacid Dehalogenase | 5e-04 | ||
| 3kzx_A | 231 | Crystal Structure Of A Had-Superfamily Hydrolase Fr | 6e-04 |
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
| >pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237 | Back alignment and structure |
|
| >pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226 | Back alignment and structure |
|
| >pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221 | Back alignment and structure |
|
| >pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221 | Back alignment and structure |
|
| >pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221 | Back alignment and structure |
|
| >pdb|2HSZ|A Chain A, Crystal Structure Of A Predicted Phosphoglycolate Phosphatase (hs_0176) From Haemophilus Somnus 129pt At 1.90 A Resolution Length = 243 | Back alignment and structure |
|
| >pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid Phosphatase, Nanp Length = 270 | Back alignment and structure |
|
| >pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250 | Back alignment and structure |
|
| >pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233 | Back alignment and structure |
|
| >pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase (nanp) From Mus Musculus At 1.90 A Resolution Length = 260 | Back alignment and structure |
|
| >pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225 | Back alignment and structure |
|
| >pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From Ehrlichia Chaffeensis At 1.9a Resolution Length = 231 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 1e-44
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 11/218 (5%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW--- 176
+F+ +GVI D + +AW LA+E G + +++G+ E ++ ++L
Sbjct: 4 AVLFDLDGVIT-DTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 62
Query: 177 SRDPAELRRMASRMEEIYQAL--QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLE 234
E + +A R + Y + + G + + L KI +AL S
Sbjct: 63 KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GP 120
Query: 235 TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294
++ + + YF AI +V KP P++F+ AA + P I +S ++A D
Sbjct: 121 FLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD 180
Query: 295 ARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332
+ + V +LG ++V ++ LK +
Sbjct: 181 SGALPIGVGRPE---DLGDDIVIVPDTSHYTLEFLKEV 215
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 2e-44
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 13/226 (5%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW--- 176
IF+ +G + + AW E I R GM + +
Sbjct: 8 SFIFDLDGTLTDSVYQNV-AAWKEALDAENIPLAMWRI-HRKIGMSGGLMLKSLSRETGM 65
Query: 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETA 236
S + R++ + + Y+ LQ I G+ E + L + + ++ T
Sbjct: 66 SITDEQAERLSEKHAQAYERLQHQI-IALPGAVELLETLDKENLKWCIATSGGIDTATIN 124
Query: 237 IDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDAR 296
+ ++ ++ IV +DV GKPDP++F+ AA+ + + C+V G++ + AA +
Sbjct: 125 LKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCK 184
Query: 297 MKCVAVAS-KHPVYELGA--ADLVVRHLDELSVVDLKNLADIESTE 339
V + S + + EL A V +L L +L +I S E
Sbjct: 185 ATGVGLLSGGYDIGELERAGALRVYEDPLDL----LNHLDEIASRE 226
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 1e-43
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 14/220 (6%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW--- 176
IF+ +GVI D + AW +A++ R++G+ E+++ +L +
Sbjct: 4 AVIFDLDGVIT-DTAEYHFLAWKHIAEQIDIPFDRDM-NERLKGISREESLESILIFGGA 61
Query: 177 --SRDPAELRRMASRMEEIYQAL--QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKT 232
AE + + R YQ L + L G + L + I + L S+
Sbjct: 62 ETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN-- 119
Query: 233 LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAA 292
+ + I + F AIV + +GKPDP++F+ AA +L P C ++ + A
Sbjct: 120 APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAI 179
Query: 293 HDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332
A M V V P + ADLVVR +L++ L
Sbjct: 180 KSAGMFAVGVGQGQP---MLGADLVVRQTSDLTLELLHEE 216
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 2e-42
Identities = 41/213 (19%), Positives = 75/213 (35%), Gaps = 12/213 (5%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW--- 176
+F+ +GV+ P +AW + + G EG I+ V
Sbjct: 26 AVLFDMDGVLFNSMP-YHSEAWHQVMKTHGLDLSREEA-YMHEGRTGASTINIVFQRELG 83
Query: 177 -SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALV-STHPRKTLE 234
E+ + ++ + G+ E + + + +V + LE
Sbjct: 84 KEATQEEIESIYHEKSILFNSYPEA--ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLE 141
Query: 235 TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294
+ + +V A DV GKP+PE ++ A + + +V N+ VEA H
Sbjct: 142 RLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHK 201
Query: 295 ARMKCVAVASKH---PVYELGAADLVVRHLDEL 324
A + +AV + V ADL+ + L
Sbjct: 202 AGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-41
Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 16/220 (7%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW--- 176
G IF+ +GVI D L QAW +A E G S F ++G+ ++++ +L
Sbjct: 7 GVIFDLDGVIT-DTAHLHFQAWQQIAAEIGISIDAQF-NESLKGISRDESLRRILQHGGK 64
Query: 177 --SRDPAELRRMASRMEEIYQAL--QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKT 232
+ E ++A R +Y + + + G + + L +I + L S
Sbjct: 65 EGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN-- 122
Query: 233 LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAA 292
T + ++ + E+FT A + KPDPE+F+ A L P+ CI ++ ++A
Sbjct: 123 APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI 182
Query: 293 HDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332
+ + M+ V + + A L++ + L+ L
Sbjct: 183 NASGMRSVGIGAGLT-----GAQLLLPSTESLTWPRLSAF 217
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 7e-41
Identities = 32/206 (15%), Positives = 79/206 (38%), Gaps = 3/206 (1%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
IF+ +GV+ D + ++G S G +Q +L D
Sbjct: 7 AIIFDMDGVLF-DTEKYYYDRRASFLGQKGISIDHLP-PSFFIGGNTKQVWENILRDEYD 64
Query: 180 PAELRRMASRMEEIYQA-LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
++ + Q + + +N + + + L S+ + + A++
Sbjct: 65 KWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALE 124
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
++ +F +++ E+ KP+PE+++ A + L R ++ +S + + A A ++
Sbjct: 125 ENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVE 184
Query: 299 CVAVASKHPVYELGAADLVVRHLDEL 324
A+ + AA ++ L ++
Sbjct: 185 VWAIRDNEFGMDQSAAKGLLDSLTDV 210
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-40
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 4/213 (1%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLC-WSR 178
AIF+ +G++I D+ L +A L + G L G++ + +
Sbjct: 11 AAIFDMDGLLI-DSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPW 69
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
+ + + R+ +L L G +E V + + + L S P LE +
Sbjct: 70 NGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLT 129
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
+ + F A+ +AE + KP P++++ A L P C+ +S + A+ ARM+
Sbjct: 130 MFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMR 189
Query: 299 CVAVASKHPVYE--LGAADLVVRHLDELSVVDL 329
+ V + + A++ + L EL+ DL
Sbjct: 190 SIVVPAPEAQNDPRFVLANVKLSSLTELTAKDL 222
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 4e-39
Identities = 39/216 (18%), Positives = 79/216 (36%), Gaps = 12/216 (5%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
+F+ +GV+ D+ ++W + + G EG I+ V R
Sbjct: 25 AVLFDMDGVLF-DSMPNHAESWHKIMKRFGFGLSREEA-YMHEGRTGASTINIVSRRERG 82
Query: 180 P----AELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLET 235
E++ + E + G+ E + + + +V+ + +L
Sbjct: 83 HDATEEEIKAIYQAKTEEFNKCPKA--ERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLD 140
Query: 236 AI-DSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294
+ + +V A DV GKP+PE ++ A + F P +V N+ V+A
Sbjct: 141 RLNHNFPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVA 200
Query: 295 ARMKCVAVASKHP---VYELGAADLVVRHLDELSVV 327
A + +AV + V A+L+ + + +
Sbjct: 201 AGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKN 236
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 1e-35
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 12/212 (5%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
+F+ +GV++ ++ + Q W ++ E G I G + + ++ +
Sbjct: 32 LFDLDGVLV-ESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVP 90
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
+ +E + A G+ G+ E + L +P A+ S R L + G
Sbjct: 91 PPDFLD-VLETRFNAAMTGV-TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAG 148
Query: 242 IEEYFTAIV--AAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC 299
+ E + + RGKP P+++ +AAQ L +PERC+V +S A A
Sbjct: 149 LTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATL 208
Query: 300 VAVASKHPVYELGA-------ADLVVRHLDEL 324
+ + GA A V+ EL
Sbjct: 209 WGLLVPGHPHPDGAAALSRLGAARVLTSHAEL 240
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-34
Identities = 42/225 (18%), Positives = 84/225 (37%), Gaps = 17/225 (7%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
A+F+ +G II + W +++ + G + AI++ D
Sbjct: 37 AALFDVDGTII-ISQPAIAAFWRDFGKDKPYFDAEHV-IHISHGWRTYDAIAKFAPDFAD 94
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILM-HYKIPMALVSTHPRKTLETAID 238
+ ++ + E Y G+ + N L K A+ ++ R + D
Sbjct: 95 EEYVNKLEGEIPEKYGEH----SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFD 150
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI-------PERCIVFGNSNQTVEA 291
+ I+ + A DV +GKP PE ++ L F + +VF ++ + A
Sbjct: 151 ILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAA 209
Query: 292 AHDARMKCVAVASKHPVYELGA--ADLVVRHLDELSVVDLKNLAD 334
A K V +A+ + L D++V++ + + V + D
Sbjct: 210 GKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEYNAETD 254
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 6e-33
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
IF+ +G+++ D L + + K + G K +A ++ +
Sbjct: 32 HLIFDMDGLLL-DTERLYSVVFQEICNRYDKKYSWDV-KSLVMGKKALEAAQIIIDVLQL 89
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239
P + + + + L G+++ + L + IP AL ++ + +
Sbjct: 90 PMSKEELVEESQTKLKEVFPTA-ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSR 148
Query: 240 I-GIEEYFTAIVAAED--VHRGKPDPEMFVYAAQLLKFIP--ERCIVFGNSNQTVEAAHD 294
F+ IV +D V GKPDP++F+ A+ P E+C+VF ++ VEAA
Sbjct: 149 HKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALA 208
Query: 295 ARMKCVAVASKHPVYE-LGAADLVVRHLDEL 324
A M+ V V + + A LV+ L +
Sbjct: 209 AGMQVVMVPDGNLSRDLTTKATLVLNSLQDF 239
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-32
Identities = 47/226 (20%), Positives = 93/226 (41%), Gaps = 16/226 (7%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
IF+ +GV++ D+ + Q L E G + R GM + + +V + P
Sbjct: 8 IFDCDGVLV-DSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPL 66
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
+ + + L+ + ++ G K ++ P + S L+ + +G
Sbjct: 67 SASLLDKSEKLLDMRLERDV-KIIDGVKFALS---RLTTPRCICSNSSSHRLDMMLTKVG 122
Query: 242 IEEYFTA-IVAAEDVH--RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
++ YF I +A+D+ R KP P++F++ A P+R +V +S + A A M+
Sbjct: 123 LKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMR 182
Query: 299 CVAVASKHPVYELGA-------ADLVVRHLDELSVVDLKNLADIES 337
+ Y A A+ V+ + +L V + +A+ E
Sbjct: 183 VIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV-IAAMAEWEG 227
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 116 bits (291), Expect = 3e-30
Identities = 47/221 (21%), Positives = 81/221 (36%), Gaps = 16/221 (7%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR- 178
I +W G I+ A++ L ++EG A R G + + I +L SR
Sbjct: 16 ALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEA-REPMGTEKSEHIRRMLGNSRI 74
Query: 179 ------------DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVS 226
+ +++R+ I + +L G KE + L+ I + +
Sbjct: 75 ANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNT 134
Query: 227 THPRKTLETAIDSIGIEEY-FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP-ERCIVFGN 284
+ + A+ + + Y + V A DV RG+P P+M + A L+ CI +
Sbjct: 135 GYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDD 194
Query: 285 SNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELS 325
+ +E A M V V+ L D DE
Sbjct: 195 TLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQ 235
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-27
Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 16/220 (7%)
Query: 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR-- 178
IF W G ++ + ++ + + G + R+ G+ + + R
Sbjct: 9 VIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEA-RKPMGLLKIDHVRALTEMPRIA 67
Query: 179 -----------DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVST 227
A+++ M EEI A+ G KE + L I + +
Sbjct: 68 SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 127
Query: 228 HPRKTLETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFIP-ERCIVFGNS 285
+ R+ ++ ++ Y +V +DV G+P P M A L P I G++
Sbjct: 128 YTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDT 187
Query: 286 NQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELS 325
++ +A M V V L ++ EL
Sbjct: 188 VSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELR 227
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 95.3 bits (238), Expect = 3e-23
Identities = 37/208 (17%), Positives = 79/208 (37%), Gaps = 7/208 (3%)
Query: 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDP 180
+F+++ + + + + + ++ + G + +++R G E++ +L D
Sbjct: 9 YLFDFDYTLADSSRGI-VTCFRSVLERHGYTGITDDMIKRTIGKTLEESF-SILTGITDA 66
Query: 181 AELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240
+L + L + + L I + ++ST R + + + +
Sbjct: 67 DQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH 126
Query: 241 GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300
+++F I+ EDV KPDPE + A LK PE + G+S A A +
Sbjct: 127 MPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFT 186
Query: 301 AVA----SKHPVYELGAADLVVRHLDEL 324
V + D ++ L +L
Sbjct: 187 GVTSGMTTAQEFQAYP-YDRIISTLGQL 213
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 4e-22
Identities = 38/208 (18%), Positives = 81/208 (38%), Gaps = 13/208 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
IF+W +I+ + ++++ + + + G L I + + +L
Sbjct: 29 IFDWYNTLIDTSINIDRTTFYQVLDQMGYKNID---LDSIPNSTIPKYLITLL-----GK 80
Query: 182 ELRRMASRMEEIYQALQGGIY-RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240
+ E + Q L G+ E ++ L I MA+VS + L + I
Sbjct: 81 RWKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHK 140
Query: 241 GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF-GNSNQTVEAAHDARMKC 299
+ YF +I+ + D KP PE + A + P + + F G+S +++A +A
Sbjct: 141 NLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLP 200
Query: 300 VAVASKHPVYEL---GAADLVVRHLDEL 324
+ S + + ++ + + +L
Sbjct: 201 IKYGSTNIIKDILSFKNFYDIRNFICQL 228
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 6e-21
Identities = 29/215 (13%), Positives = 81/215 (37%), Gaps = 13/215 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILR---RIEGMKNEQAISEV-LCWS 177
+F+ +G +++ ++ E + +++G + +S V L +
Sbjct: 8 LFDIDGTLLKVESMN-RRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERA 66
Query: 178 RDPAELRRMASRMEEIY-QALQGGIYRLRTGSKEFVNILM-HYKIPMALVSTHPRKTLET 235
+ + ++ + + L G +E ++ L + + L++ + +
Sbjct: 67 EIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRH 126
Query: 236 AIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL---KFIPERCIVFGNSNQTVEAA 292
+ GI+ YF A+D P + + A+ + + P + ++ G++ + A
Sbjct: 127 KLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCA 186
Query: 293 HDARMKCVAVAS-KHPVYELGA--ADLVVRHLDEL 324
+ + +AVA+ + EL + ++ E
Sbjct: 187 RELDARSIAVATGNFTMEELARHKPGTLFKNFAET 221
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 1e-20
Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 25/207 (12%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
+F+ +G + D +E P IL + +
Sbjct: 8 HWVFDMDGTLTIAVHDF------AAIREALSIPAEDDILTHLAAL--------------- 46
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239
PA+ ++ R G+ E V L + +++ + R+ +++
Sbjct: 47 PADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEA 106
Query: 240 IGIEEYF-TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
IG+ + F A V D KP P + A+ P R ++ G+ ++ A +
Sbjct: 107 IGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTR 166
Query: 299 CVAVA-SKHPVYELGAADLVVRHLDEL 324
V V +P EL D R +L
Sbjct: 167 TVLVNLPDNPWPEL--TDWHARDCAQL 191
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 4e-19
Identities = 33/207 (15%), Positives = 75/207 (36%), Gaps = 8/207 (3%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
+F+ +G + + + K +L + L + G + + E + D
Sbjct: 8 LFDLDGTLTDSAEGITKSVKYSLN-KFDIQVEDLSSLNKFVGPPLKTSFMEYY--NFDEE 64
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
+ ++A ++ G + ++ L Y + + ++ P + ++
Sbjct: 65 TATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFK 124
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
+ YF AIV + + ++ YA + L + I+ G+ V A + +
Sbjct: 125 LAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIG 184
Query: 302 VA----SKHPVYELGAADLVVRHLDEL 324
V S + G A+ +V +DEL
Sbjct: 185 VTYGFGSYEELKNAG-ANYIVNSVDEL 210
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 83.3 bits (207), Expect = 5e-19
Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 26/201 (12%)
Query: 134 PDLEKQAWLTLAQEEGKSPPPAFILRRI--EGMKN--EQAISEVLCWSRDPAELRRMASR 189
P LA GK PA + + E I +E ++
Sbjct: 20 PAYTTVMREVLA-TYGKPFSPAQAQKTFPMAAEQAMTELGI--------AASEFDHFQAQ 70
Query: 190 MEEIYQALQGGIYRLRT----GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245
E++ + + + G L ++ + +V++ R LE+ + S
Sbjct: 71 YEDVMAS-----HYDQIELYPGITSLFEQL-PSELRLGIVTSQRRNELESGMRSYPFMMR 124
Query: 246 FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA-- 303
++A+D + KPDP + A + + P+ + G+S + A A +
Sbjct: 125 MAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG 184
Query: 304 SKHPVYELGAADLVVRHLDEL 324
+ + ++
Sbjct: 185 MDPNA-DHQKVAHRFQKPLDI 204
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 2e-18
Identities = 25/181 (13%), Positives = 60/181 (33%), Gaps = 5/181 (2%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
I++ +G +++ + + + I + + V D
Sbjct: 8 IWDLDGTLLDSYEAILS-GIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVA---EDRN 63
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
+ +++ A + L G++E + I + + + +G
Sbjct: 64 LDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLG 122
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
+E YFT I+ ++ KP PE Y + + G+ VE A ++ ++ +
Sbjct: 123 VESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSIN 182
Query: 302 V 302
Sbjct: 183 F 183
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 8e-18
Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 5/152 (3%)
Query: 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETA 236
E + + Y I RL KE + L +A+V+ P K ++
Sbjct: 88 ELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPI 147
Query: 237 IDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDAR 296
+ + GI+ F+ ++ + + KP P F Y P++ + G+S + AAH A
Sbjct: 148 LTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAG 207
Query: 297 MKCVAVA----SKHPVYELGAADLVVRHLDEL 324
V + P+ + D + ++
Sbjct: 208 CAVVGLTYGYNYNIPIAQSK-PDWIFDDFADI 238
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 79.8 bits (197), Expect = 2e-17
Identities = 29/171 (16%), Positives = 65/171 (38%), Gaps = 9/171 (5%)
Query: 184 RRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE 243
+ S Y + R G+++ + L + +++ I + ++
Sbjct: 75 PKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134
Query: 244 EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCVAV 302
++F ++ ++ KP P++F A + PE ++ G+ + + A MK V
Sbjct: 135 DFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWF 194
Query: 303 ----ASKHPVYELGAADLVVRHLDELSVVDLKNLADIESTEFGSVEPEMEV 349
S+ + AD + +L+ L L+ LA S+ P ++
Sbjct: 195 RYGKHSERELEYRKYADYEIDNLESL----LEVLARESSSNKKVHPPRQQI 241
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 78.7 bits (194), Expect = 4e-17
Identities = 31/213 (14%), Positives = 69/213 (32%), Gaps = 20/213 (9%)
Query: 119 LGAIFEWEGVIIEDNPDLEKQAW--LTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW 176
+ + G+ I+D + + + + + P + E + + +
Sbjct: 26 SHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKV------ 79
Query: 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVS---THPRKTL 233
D ++R L + G+KE + + + A++ P
Sbjct: 80 --DVELVKR-----ATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYT 132
Query: 234 ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAA 292
++ G+ E+ A++V KP EMF + PE + G++ + A
Sbjct: 133 RLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGA 192
Query: 293 HDARMKCVAVASKH-PVYELGAADLVVRHLDEL 324
M V + + V +L + + L
Sbjct: 193 RKVGMWAVWINQEGDKVRKLEERGFEIPSIANL 225
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 8e-17
Identities = 21/151 (13%), Positives = 51/151 (33%), Gaps = 6/151 (3%)
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
+ + + + E + ++ KE + +L + + ++ P ET +
Sbjct: 86 EDKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILR 145
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARM 297
I+ YF I + E+ Y L ++ I+ G+ + A +
Sbjct: 146 YFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGI 205
Query: 298 KCVAVA----SKHPVYELGAADLVVRHLDEL 324
+ V S + E +V +++ +
Sbjct: 206 DSIGVLYGYGSFEEISESE-PTYIVENVESI 235
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 76.0 bits (188), Expect = 1e-16
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 12/182 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
I++ G ++++ A++ G + + + + + AI
Sbjct: 10 IWDLGGTLLDNYETS-TAAFVETLALYGITQDHDSVYQAL-KVSTPFAIETFA------P 61
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
L + +E L G + + + + LVS + LE ++
Sbjct: 62 NLENFLEKYKENEARELEHP-ILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEKTS 119
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
I YFT +V + + KP+PE +Y + + +V G+ +EA A +
Sbjct: 120 IAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHL 177
Query: 302 VA 303
Sbjct: 178 FT 179
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 2e-16
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 2/140 (1%)
Query: 186 MASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY 245
+A R E + A+ L +KE + L + + ++S R+ + S G++ Y
Sbjct: 90 LAERFSEDFFAIIPTKSGLMPHAKEVLEYL-APQYNLYILSNGFRELQSRKMRSAGVDRY 148
Query: 246 FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCVAVAS 304
F I+ +ED+ KP PE+F +A + ++ G+S + + AH M
Sbjct: 149 FKKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNV 208
Query: 305 KHPVYELGAADLVVRHLDEL 324
+ L EL
Sbjct: 209 TERTVFPFQPTYHIHSLKEL 228
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 76.4 bits (189), Expect = 2e-16
Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 2/147 (1%)
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
+ Y + + L +A+VS + + +D
Sbjct: 59 KDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILD 118
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
+ + YF IV + KP P + ++L PE+ ++ G+++ +EA A K
Sbjct: 119 ILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTK 178
Query: 299 CVAVA-SKHPVYELGAADLVVRHLDEL 324
+ D + +L
Sbjct: 179 TALALWGYVKLNSQI-PDFTLSRPSDL 204
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 7e-16
Identities = 16/107 (14%), Positives = 36/107 (33%)
Query: 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE 253
Y + G + + + + ++S P I + ++ +
Sbjct: 9 YAGVLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSG 68
Query: 254 DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300
++ KP+ F AA + C++ +S V A +A + V
Sbjct: 69 ELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 1e-15
Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 6/119 (5%)
Query: 207 GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFV 266
G++ + L +P A + P ++AA G P P+
Sbjct: 40 GAQNALKALRDQGMPCAWIDELPEALST-----PLAAPVNDWMIAAPRPTAGWPQPDACW 94
Query: 267 YAAQLLKFIP-ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDEL 324
A L E C++ + +++ +A + + +AS P+ L + + E
Sbjct: 95 MALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAER 153
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 3e-15
Identities = 32/162 (19%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Query: 167 EQAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVS 226
E + ++ A+ R++A ++++ + L K + L ++ + L++
Sbjct: 85 TSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTEL-RKEVRLLLLT 143
Query: 227 THPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN 286
R+T I++ + YF AIV + KP P +F + LL P C++ G++
Sbjct: 144 NGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTL 203
Query: 287 QT-VEAAHDARMKC---VAVASKHPVYELGAADLVVRHLDEL 324
+T ++ +A +K + + + P+ +V + EL
Sbjct: 204 ETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 72.4 bits (178), Expect = 6e-15
Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 3/140 (2%)
Query: 187 ASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF 246
EI + L E + L K + +++ + +D++GI++ F
Sbjct: 84 PENFWEISLRMSQRYGELYPEVVEVLKSL-KGKYHVGMITDSDTEQAMAFLDALGIKDLF 142
Query: 247 TAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCVAVASK 305
+I +E+ KP P +F A + E + G++ + + M + + K
Sbjct: 143 DSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK 202
Query: 306 HPVYELGA-ADLVVRHLDEL 324
E D +V L E+
Sbjct: 203 GEKREFWDKCDFIVSDLREV 222
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 6e-15
Identities = 33/225 (14%), Positives = 81/225 (36%), Gaps = 13/225 (5%)
Query: 108 LLRQERMGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMK-N 166
LLR G+ + P +Q + + + S P + + +
Sbjct: 12 LLRLRHPLGEAYATKARAHGLEV--EPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWW 69
Query: 167 EQAISEVLCWS--RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMAL 224
+ + + +D + +A ++ + + +++ G+++ + + +A+
Sbjct: 70 LDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCT--WQVLDGAEDTLRECRTRGLRLAV 127
Query: 225 VSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN 284
+S R+ LE + +G+ E+F ++ +E KPDP +F A +L P G+
Sbjct: 128 ISNFDRR-LEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGD 186
Query: 285 SNQT-VEAAHDARMKCVAVASKHPVYELG----AADLVVRHLDEL 324
+ + M V + + + ++ L L
Sbjct: 187 NYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHL 231
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 7e-15
Identities = 30/167 (17%), Positives = 67/167 (40%), Gaps = 6/167 (3%)
Query: 162 EGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIP 221
E + E + + E+ R+ + Y G + + L +
Sbjct: 69 ESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVK 128
Query: 222 MALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281
+A+VS P + ++ ++ + F + + R KP P+M ++L ++C+
Sbjct: 129 LAVVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVY 187
Query: 282 FGNSNQTVEAAHDARMKCVAVA----SKHPVYELGAADLVVRHLDEL 324
G+S ++ A ++ M +AV S + + G A ++V ++L
Sbjct: 188 IGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHG-ATVIVDTAEKL 233
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 1e-14
Identities = 27/146 (18%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 190 MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAI 249
+E+ Y+ ++L G+ + ++ L + + +V+ T + G+ +F I
Sbjct: 90 LEQKYRRFLEEGHQLIDGAFDLISNL-QQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDI 148
Query: 250 VAAEDVHRGKPDPEMFVYAAQLLKFI-PERCIVFGNSNQT-VEAAHDARMKCVAVASKH- 306
+ED KP E F Y + + E ++ G+S ++ A + +
Sbjct: 149 FVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMK 208
Query: 307 PVYELGAADLVVRHLDEL-SVVDLKN 331
P +R L+EL +++++N
Sbjct: 209 PNVPEIIPTYEIRKLEELYHILNIEN 234
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 1e-14
Identities = 31/207 (14%), Positives = 72/207 (34%), Gaps = 13/207 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
F+ +G +++ + + T E G P A +R G E + + L
Sbjct: 8 FFDLDGTLVDSSIGIHNAFTYTFK-ELGVPSPDAKTIRGFMGPPLESSFATCL----SKD 62
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
++ Y+A +L + + L P+ + +T T + ++
Sbjct: 63 QISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEEL-SSSYPLYITTTKDTSTAQDMAKNLE 121
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
I +F I + ++ A Q + PE+ I+ G++ + A + ++ +A
Sbjct: 122 IHHFFDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLA 179
Query: 302 VA----SKHPVYELGAADLVVRHLDEL 324
+ + + D + E+
Sbjct: 180 ITWGFGEQADLLNYQ-PDYIAHKPLEV 205
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 3e-14
Identities = 22/170 (12%), Positives = 51/170 (30%), Gaps = 4/170 (2%)
Query: 159 RRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRT--GSKEFVNILM 216
M + + L RL + + L
Sbjct: 49 WLRSLMNRYVNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELK 108
Query: 217 HYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276
+ +A++S ++++ + G+ + F +++ + V KPD ++ A Q L
Sbjct: 109 RRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDR 168
Query: 277 ERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPVYELG-AADLVVRHLDEL 324
+ ++ A + + + E+G D V L +
Sbjct: 169 SAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 218
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 2e-13
Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 10/182 (5%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQ---AISEVLCWSR 178
++ GV++ + D E++A + + R E ++ +
Sbjct: 8 FWDIGGVLLTNGWDREQRADV----AQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQ 63
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAID 238
R + E+ ++ + R L + M ++ R E I
Sbjct: 64 VVFYQPRDFTP-EDFRAVMEE-QSQPRPEVLALARDL-GQRYRMYSLNNEGRDLNEYRIR 120
Query: 239 SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
+ G+ E+ A + + KP+P M+ L + PE ++ + Q V+AA M
Sbjct: 121 TFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMH 180
Query: 299 CV 300
V
Sbjct: 181 AV 182
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 4e-13
Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 4/139 (2%)
Query: 190 MEEIYQALQGGIYRLRT--GSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT 247
+ + L L + E + L +A++S + L+ A+ + ++
Sbjct: 90 RKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD 149
Query: 248 AIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV--ASK 305
+ ++A+D+ KPDP ++ +A L P ++ + A V +
Sbjct: 150 SCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGN 209
Query: 306 HPVYELGAADLVVRHLDEL 324
P YE V L EL
Sbjct: 210 PPEYEFAPLKHQVNSLSEL 228
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 4e-13
Identities = 32/197 (16%), Positives = 75/197 (38%), Gaps = 16/197 (8%)
Query: 137 EKQAWLTLAQEEGKSPPPAFILRRI-EGMKNEQAISEVLCWSRDPAELRRMASR------ 189
+ + ++ G + R + M E DP + +
Sbjct: 21 FYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYPSERL 80
Query: 190 MEEIYQA-LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA 248
++E+ +A ++ G L + EF+ L +ALVS + ++T ++ +++YF A
Sbjct: 81 VKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLKKYFDA 139
Query: 249 IVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCVAVASKHP 307
+ + ++ KP+P++F +A L + + G+ + A + + + +
Sbjct: 140 LALSYEIKAVKPNPKIFGFA---LAKVGYPAVHVGDIYELDYIGAKRSYVDPILL---DR 193
Query: 308 VYELGAADLVVRHLDEL 324
V++L E
Sbjct: 194 YDFYPDVRDRVKNLREA 210
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 66.7 bits (162), Expect = 2e-12
Identities = 28/138 (20%), Positives = 45/138 (32%), Gaps = 33/138 (23%)
Query: 220 IPMALVSTHPRKTLETAIDSIGIEEYF--TAIVAAEDV-----------HRGKPDPEMFV 266
+ + + P +++G+ YF I A DV GKP+P ++
Sbjct: 232 FELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYI 291
Query: 267 YAA--------------QLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV----ASKHPV 308
A Q + + G+S + +A + K
Sbjct: 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAA 351
Query: 309 YELGA--ADLVVRHLDEL 324
EL A AD V+ HL EL
Sbjct: 352 GELEAHHADYVINHLGEL 369
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 7e-12
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 4/136 (2%)
Query: 191 EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIV 250
E + L+ + + +S ++ ++ G+ YF I
Sbjct: 60 ESKFDEELNKWKNLKAYEDTKYLKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIF 119
Query: 251 AAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPVY 309
+AE V KP P+++ Y + + + ++ V A +A M+ + V V
Sbjct: 120 SAESVKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVD 177
Query: 310 ELG-AADLVVRHLDEL 324
+G D++V EL
Sbjct: 178 PIGGKPDVIVNDFKEL 193
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 1e-11
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 203 RLRTGSKEFVNILMHYKIPMALVS---THPRKTLETAIDSIGIEEYFTAIV----AAEDV 255
LR +KE + + A++S T + ++ + + GI +YF I +
Sbjct: 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPG 93
Query: 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCV 300
KPD +F + L+ ++ GN+ ++ + A+ A + +
Sbjct: 94 KMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAI 139
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 3e-11
Identities = 33/237 (13%), Positives = 63/237 (26%), Gaps = 42/237 (17%)
Query: 120 GAIFEWEGV------IIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV 173
G +F+ + V + Q W E M V
Sbjct: 11 GTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYS---------WLRALMGRYADFWSV 61
Query: 174 LCWSRDPAELRRMASRM-EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKT 232
+ L + E + RL + + A++S
Sbjct: 62 TREALAYT-LGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDM 120
Query: 233 LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAA 292
L+ + + G+ + F A+++ + KP P+ + ++L P + ++ V A
Sbjct: 121 LQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGA 180
Query: 293 HDARMKCVAV------------------------ASKHPVYELG-AADLVVRHLDEL 324
+ V A + A D VV L +L
Sbjct: 181 KNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDL 237
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 4e-11
Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 12/185 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQA-----ISEVLCW 176
IF+ VI++ + + AW L + P A + + + IS+
Sbjct: 11 IFDLGNVIVDIDFNRVLGAWSDLTRI-----PLASLKKSFHMGEAFHQHERGEISDEAFA 65
Query: 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETA 236
E+ S E+ Q LR ++ L + ++S R
Sbjct: 66 EALCHEMALPLSY-EQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFW 124
Query: 237 IDSI-GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295
+ I + I ++D+ KP+ ++ + Q F P + F ++ +E A+
Sbjct: 125 PEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQL 184
Query: 296 RMKCV 300
+ +
Sbjct: 185 GITSI 189
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 3e-09
Identities = 27/190 (14%), Positives = 69/190 (36%), Gaps = 18/190 (9%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI--EGMKNEQ---AISEVLCW 176
+F+ GV+I N + + + + + +L +G+ + SE
Sbjct: 9 VFDLGGVLIHLNREESIRRFKAIGVAD-----IEEMLDPYLQKGLFLDLESGRKSEEEFR 63
Query: 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETA 236
+ + + + +++Y AL G + + ++++ L + L+S L+ A
Sbjct: 64 TELSRYIGKELT-YQQVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLA 121
Query: 237 ID------SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290
+ ++ +F + A+ + + KP+ ++F+ PE + + V
Sbjct: 122 MSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVA 181
Query: 291 AAHDARMKCV 300
A
Sbjct: 182 TAERLGFHTY 191
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 2e-07
Identities = 27/188 (14%), Positives = 67/188 (35%), Gaps = 14/188 (7%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQ---AISEVLCWSR 178
+ + GV+I + + + + + + + F +++G+ +Q I+
Sbjct: 32 LIDLGGVLINLDRERCIENFKKIGFQNIEE---KFCTHQLDGIFLQQEKGLITPAEFRDG 88
Query: 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVS------THPRKT 232
+ +M S ++I A + + T + + L K + L+S
Sbjct: 89 IREMMGKMVSD-KQIDAAWNSFLVDIPTYKLDLLLKLRE-KYVVYLLSNTNDIHWKWVCK 146
Query: 233 LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAA 292
+ +E+YF + ++ KP+PE+F + P+ +S + A
Sbjct: 147 NAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVA 206
Query: 293 HDARMKCV 300
+ +
Sbjct: 207 QELGISTY 214
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 50.0 bits (119), Expect = 3e-07
Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 7/152 (4%)
Query: 185 RMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244
R R+ EI +A + G +E V + + L++ E I+ G+ +
Sbjct: 94 RDIQRIVEIGRATLQHPVEVIAGVREAVA-AIAADYAVVLITKGDLFHQEQKIEQSGLSD 152
Query: 245 YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCVAVA 303
F I + DP+ + ER ++ GNS ++ VE +
Sbjct: 153 LFPRIEVVS-----EKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTP 207
Query: 304 SKHPVYELGAADLVVRHLDELSVVDLKNLADI 335
+ V D
Sbjct: 208 YAVTWAHEQDHGVAADEPRLREVPDPSGWPAA 239
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 3e-07
Identities = 22/153 (14%), Positives = 53/153 (34%), Gaps = 9/153 (5%)
Query: 185 RMASRMEEIYQALQGGIYRLRTGSKEFVNIL-MHYKIPMALVSTHPRKTLETAIDSIGIE 243
+ ++ ++ ++L L G KE + L K + + + E ++ G+
Sbjct: 87 DIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS 146
Query: 244 EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCVAV 302
YF I D + ++ +L+ P ++ GNS ++ ++ V +
Sbjct: 147 PYFDHIEVMSD-----KTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHI 201
Query: 303 ASKHPVYELGAADLVVRHLDELSVVDLKNLADI 335
+ L ++ L +L +
Sbjct: 202 PFEVMWKHEVTETFAHERLKQVK--RLDDLLSL 232
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 9e-07
Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 13/97 (13%)
Query: 241 GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI---PERCIVFGNSNQT-VEAAHDAR 296
+ F I+ A+DV KP+P F Y L + + S A+DA
Sbjct: 134 KLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAG 193
Query: 297 MKCV---------AVASKHPVYELGAADLVVRHLDEL 324
+ + H + D + E+
Sbjct: 194 LVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM 230
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 1e-06
Identities = 33/209 (15%), Positives = 66/209 (31%), Gaps = 29/209 (13%)
Query: 135 DLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNE-QAISEVLCWSRDPAELRRMASRMEEI 193
L ++ A +G P PA ++ ++ QA+ + +CW R
Sbjct: 57 SLLRKQAEEDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMS-------LDRKTTA 109
Query: 194 YQALQGGIYR--LRTGSK------EFVNILMHYK---IPMALVSTHPR---KTLETAIDS 239
+ LQG ++R G + V + ++ + + + S+ K L
Sbjct: 110 LKQLQGHMWRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTE 169
Query: 240 IGIEEYFTAIVAAEDVHRG-KPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMK 298
I E D G K + E + A + + + + AA +A +
Sbjct: 170 GDILELVDGHF---DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVH 226
Query: 299 CVAVA---SKHPVYELGAADLVVRHLDEL 324
V + + ++ EL
Sbjct: 227 VAVVVRPGNAGLTDDEKTYYSLITSFSEL 255
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 30/171 (17%), Positives = 48/171 (28%), Gaps = 57/171 (33%)
Query: 2 PP-LCQGIPVRDLS----SKKKFPDCCRFPVTEFLGRRIVNYCPPPRMKLSRSINKSINA 56
P + P R LS S + N+ KL+ I S+N
Sbjct: 319 PREVLTTNPRR-LSIIAESIRDGLA------------TWDNWKHVNCDKLTTIIESSLNV 365
Query: 57 LAMELTKETYS----FREEEKIPLD-----WRYQIDTGVD------RKPGL---WPPEN- 97
L ++ + F IP W I + V K L P E+
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425
Query: 98 ------------KADN-PSLHNPLLRQERMGCGWLGAIFEWEGVII--EDN 133
K +N +LH ++ + F+ + +I D
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKT-----FDSDDLIPPYLDQ 471
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 2e-05
Identities = 40/270 (14%), Positives = 88/270 (32%), Gaps = 81/270 (30%)
Query: 130 IEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASR 189
+D D+ K L++EE + I K+ + + L W+ + S+
Sbjct: 35 CKDVQDMPKSI---LSKEE---------IDHIIMSKDAVSGTLRLFWT--------LLSK 74
Query: 190 MEEIYQALQGGIYRLRTGSKEFVNILMH--YKIPMALVSTHPRKTLETAIDSIGIEEYFT 247
EE+ Q +FV ++ YK M+ + T R+ S+ Y
Sbjct: 75 QEEMVQ--------------KFVEEVLRINYKFLMSPIKTEQRQP------SMMTRMY-- 112
Query: 248 AIVAAEDVHR-GKPDPEMFVYAAQ--------LLKFIPERCIV------FGNSNQTVEAA 292
I + ++ + + V Q LL+ P + ++ G + ++
Sbjct: 113 -IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171
Query: 293 HDARMKCVAVASKHPVY--ELG---AADLVVRHLDELSVVDLKNLADIESTEFGSVEPEM 347
+++C ++ L + + V+ L +L N S S ++
Sbjct: 172 LSYKVQC---KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW---TSRSDHSSNIKL 225
Query: 348 EVEEEEEG---------YPSSLTTVDDIFW 368
+ + Y + L + ++
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNV-Q 254
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 1e-04
Identities = 47/330 (14%), Positives = 90/330 (27%), Gaps = 129/330 (39%)
Query: 10 VRDLSSKKKFPDCCRFPVTEFLGR--RIVNYCPPPRMKLSRSINKSINALAMELTKETYS 67
V++ + F C+ +T R ++ ++ + S++ +M LT +
Sbjct: 253 VQNAKAWNAFNLSCKILLTT---RFKQVTDFLSAATTT-----HISLDHHSMTLTPD--- 301
Query: 68 FREEEKIPLDWRYQIDTGVDRKPGLWPPENKADNPSLHNPLLRQERMGCGWLGAIFEWEG 127
E + + L + +D +P P E NP L I
Sbjct: 302 --EVKSLLLKY-------LDCRPQDLPREVLT-----TNPRR---------LSII----A 334
Query: 128 VIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAIS---EVLCWSRDPAELR 184
I D W + + K I VL +PAE R
Sbjct: 335 ESIRDGLATWDN-W-----------------KHVNCDKLTTIIESSLNVL----EPAEYR 372
Query: 185 RMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244
+M + L ++ +I P L
Sbjct: 373 KM-------FDRL--SVFP------PSAHI--------------PTILLS---------- 393
Query: 245 YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD----ARMKCV 300
++ + + D + V +L K +V ++ + ++K
Sbjct: 394 ----LIWFDVIKS---DVMVVV--NKLHK----YSLVEKQPKESTISIPSIYLELKVKLE 440
Query: 301 AVASKHPV----YELGAA----DLVVRHLD 322
+ H Y + DL+ +LD
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLD 470
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 2e-05
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 10/126 (7%)
Query: 209 KEFVNILMHYKIPMALVSTH-PRKTLETAIDSIGIEEYFTAIVAAEDVH----RGKPDPE 263
+ + KI + T+ + + +GI + F + + KP +
Sbjct: 149 NMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVK 208
Query: 264 MFVYAAQLLKFIP-ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELG----AADLVV 318
F A + E +S + +E MK ++ V E+ +V+
Sbjct: 209 AFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI 268
Query: 319 RHLDEL 324
+ EL
Sbjct: 269 SDILEL 274
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 2e-04
Identities = 16/93 (17%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 248 AIVAA-------EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKC 299
A+ A + + GKP P + A ++ E ++ G++ +T + A A ++
Sbjct: 158 ALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLET 217
Query: 300 VAVAS-KHPVYELGAA----DLVVRHLDELSVV 327
+ V S + ++ + + + E+ V+
Sbjct: 218 ILVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI 250
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 4e-04
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Query: 258 GKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKCVAVAS-KHPVYELGAA- 314
GKP+ F+ A + PE ++ G+ + V+ A + M + V + K+ +
Sbjct: 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKIN 237
Query: 315 ---DLVVRHLDELSVVDLKNL 332
L L++L
Sbjct: 238 PPPYLTCESFPHAVDHILQHL 258
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 8e-04
Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
Query: 248 AIVAA-------EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT-VEAAHDARMKC 299
++ A + V GKP+ + A ++L + ++ G++ T + A + +
Sbjct: 164 SLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDT 223
Query: 300 VAVAS-KHPVYELGAA----DLVVRHLDELSVVD 328
+ V + V E+ V+ LDE + +
Sbjct: 224 LLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNE 257
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 368 | |||
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.97 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.97 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.97 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.97 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.97 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.97 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.96 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.96 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.96 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.96 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.96 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.96 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.96 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.95 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.95 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.95 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.95 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.95 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.95 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.94 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.94 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.94 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.94 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.94 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.94 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.94 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.94 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.93 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.93 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.93 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.93 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.93 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.93 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.93 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.93 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.92 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.92 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.92 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.92 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.92 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.92 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.92 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.91 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.91 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.91 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.91 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.9 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.9 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.9 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.89 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.89 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.89 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.88 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.88 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.88 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.87 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.86 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.85 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.85 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.85 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.85 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.84 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.84 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.82 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.82 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.81 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.81 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.81 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.79 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.79 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.79 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.78 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.77 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.77 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.76 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.76 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.76 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.76 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.75 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.75 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.75 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.74 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.73 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.73 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.73 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.58 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.72 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.72 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.71 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.71 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.71 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.69 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.68 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.68 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.67 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.67 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.67 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.65 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.65 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.64 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.61 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.58 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.57 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.55 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.52 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.51 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.51 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.5 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.5 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.48 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.45 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.43 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.43 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.42 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.41 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.39 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.37 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.35 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.23 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.13 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.12 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.06 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.05 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.05 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.0 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.0 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 98.99 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.94 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.94 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.88 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.8 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.55 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.4 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.4 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.32 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.25 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.24 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.04 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.03 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.96 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.88 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.73 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.7 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.68 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.51 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.5 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.38 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.38 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.28 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.23 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.19 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.01 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.9 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 96.45 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.36 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 95.77 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 94.8 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 94.36 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 93.75 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 93.6 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 93.41 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 92.21 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 92.14 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 91.86 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 88.9 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 88.5 |
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=243.28 Aligned_cols=222 Identities=23% Similarity=0.387 Sum_probs=166.3
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC-----CCHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS-----RDPAELRRMAS 188 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~~~l~~ 188 (368)
|+++||+||||+||||+|+. .++..+|.++++++|+..+... ...+.|....+.+..++... ........+..
T Consensus 1 M~MkiKaViFDlDGTL~Ds~-~~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTA-HLHFQAWQQIAAEIGISIDAQF-NESLKGISRDESLRRILQHGGKEGDFNSQERAQLAY 78 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCH-HHHHHHHHHHHHHTTCCCCTTG-GGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHH
T ss_pred CCccCcEEEEcCCCcccCCH-HHHHHHHHHHHHHcCCCCCHHH-HHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 45669999999999999865 5777899999999999876544 56677888887777765432 23444445555
Q ss_pred HHHHHHHHHHCC--ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHH
Q 043738 189 RMEEIYQALQGG--IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFV 266 (368)
Q Consensus 189 ~~~~~~~~~~~~--~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~ 266 (368)
.....+...+.. ...++||+.++++.|+++|++++++|++. .....++++|+..+|+.++++++++.+||+|++|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~--~~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~ 156 (243)
T 4g9b_A 79 RKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSL--NAPTILAALELREFFTFCADASQLKNSKPDPEIFL 156 (243)
T ss_dssp HHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCT--THHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHH
T ss_pred HHHHHHHHHHHhcccccccccHHHHHHhhhcccccceeccccc--chhhhhhhhhhccccccccccccccCCCCcHHHHH
Confidence 555555444332 24689999999999999999999999974 45678999999999999999999999999999999
Q ss_pred HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhc--------c---ccc
Q 043738 267 YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKN--------L---ADI 335 (368)
Q Consensus 267 ~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~--------L---~d~ 335 (368)
.+++++|++|++|++|||+.+|+++|+++||.+|+|+++.. .+|.++++..++....+.. | ++.
T Consensus 157 ~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~-----~ad~~~~~~~~l~~~~l~~~~~~l~~~l~~~~~~ 231 (243)
T 4g9b_A 157 AACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT-----GAQLLLPSTESLTWPRLSAFWQNVAENLYFQSHH 231 (243)
T ss_dssp HHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC-----SCSEEESSGGGCCHHHHHHHHHHHSCCGGGC---
T ss_pred HHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC-----cHHHhcCChhhcCHHHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999996643 3566666666654433332 2 455
Q ss_pred cccccCCCC
Q 043738 336 ESTEFGSVE 344 (368)
Q Consensus 336 ~~~~~~~~~ 344 (368)
.+..|+.|+
T Consensus 232 ~~~~~~~p~ 240 (243)
T 4g9b_A 232 HHHHWSHPQ 240 (243)
T ss_dssp ---------
T ss_pred ccccCCCCC
Confidence 666777654
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=231.93 Aligned_cols=214 Identities=20% Similarity=0.263 Sum_probs=182.2
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
...++|+|+|||||||+++.. ....++..+++++|...... .+....|......+..++........+..+...+.+.
T Consensus 15 ~~~~ik~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (237)
T 4ex6_A 15 PAAADRGVILDLDGTLADTPA-AIATITAEVLAAMGTAVSRG-AILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRR 92 (237)
T ss_dssp --CCCEEEEECSBTTTBCCHH-HHHHHHHHHHHHTTCCCCHH-HHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHH
T ss_pred CcccCCEEEEcCCCCCcCCHH-HHHHHHHHHHHHcCCCCCHH-HHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 455689999999999998664 45577888999999544444 4677788888888888877666677777777777777
Q ss_pred HHHHHC--CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 194 YQALQG--GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 194 ~~~~~~--~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
+..... ....++||+.++|+.|++.|++++++||+....++..++++|+..+|+.+++++++..+||++++|..++++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 172 (237)
T 4ex6_A 93 FGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARG 172 (237)
T ss_dssp HHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHH
T ss_pred HHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHH
Confidence 777664 557899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-ccc--CCCcEEEcCchhhhHHHH
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-YEL--GAADLVVRHLDELSVVDL 329 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-~~~--~~ad~vv~sl~eL~~~~l 329 (368)
+|++|++|++|||+.||++||+.+|+.+|+|.++... ..+ ..||++++++.||...+.
T Consensus 173 lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~ 233 (237)
T 4ex6_A 173 LGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVL 233 (237)
T ss_dssp HTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHH
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999966432 333 259999999999976654
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.1e-30 Score=229.08 Aligned_cols=205 Identities=24% Similarity=0.408 Sum_probs=163.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
||+||||+||||+|+. ..+..++.++++++|.+.+... .+.+.|......................+...+.+.+...
T Consensus 1 IkAViFD~DGTL~ds~-~~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTE-PLYFEAYRRVAESYGKPYTEDL-HRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRV 78 (216)
T ss_dssp CCEEEEESBTTTBCCG-GGHHHHHHHHHHHTTCCCCHHH-HHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCH-HHHHHHHHHHHHHcCCCCCHHH-HHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHHHH
Confidence 5899999999999865 4666889999999999877655 5777888877766655543333323333334444444444
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
......++||+.++++.|++.|++++++||++...+...++.+|+..+||.++++++++..||+|++|..+++++|++|+
T Consensus 79 ~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~ 158 (216)
T 3kbb_A 79 FSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPE 158 (216)
T ss_dssp HHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGG
T ss_pred HHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCcc
Confidence 43446789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEE-EcCCC-CccccC--CCcEEEcCchhhh
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVA-VASKH-PVYELG--AADLVVRHLDELS 325 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~-v~~~~-~~~~~~--~ad~vv~sl~eL~ 325 (368)
+|++|||+.+|+.+|+++||++|+ +.++. ....+. .++.++ +.+++.
T Consensus 159 e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~~~eli 209 (216)
T 3kbb_A 159 KVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-KPEEIL 209 (216)
T ss_dssp GEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-CGGGHH
T ss_pred ceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-CHHHHH
Confidence 999999999999999999999986 66443 333332 244444 667764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=229.04 Aligned_cols=202 Identities=15% Similarity=0.216 Sum_probs=162.3
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
++|+|+||+||||+|+.. ....++..+++++|........+..+.|....+.+... ........+...+.+.+..
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 77 (210)
T 2ah5_A 3 SITAIFFDLDGTLVDSSI-GIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC----LSKDQISEAVQIYRSYYKA 77 (210)
T ss_dssp TCCEEEECSBTTTEECHH-HHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT----SCGGGHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCcCccCHH-HHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 479999999999998664 45577888889999876444445667777665544433 2223344555555555554
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
.......++||+.++|+.|++ |++++++||+....+...++++|+..+|+.+++++ +..||+|++|..+++++|++|
T Consensus 78 ~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p 154 (210)
T 2ah5_A 78 KGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAP 154 (210)
T ss_dssp TGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCG
T ss_pred hccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCCCc
Confidence 322335789999999999999 99999999999889999999999999999999887 789999999999999999999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhH
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSV 326 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~ 326 (368)
++|++|||+.+|+++|+++|+.+|++.++.. ..++ ..||++++++.||..
T Consensus 155 ~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 155 EQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred ccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 9999999999999999999999999996644 3333 249999999999854
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-29 Score=229.22 Aligned_cols=209 Identities=18% Similarity=0.227 Sum_probs=170.9
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCC-CCHHHHHHHHhCCCHHHHHHHHH---------------------h
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKS-PPPAFILRRIEGMKNEQAISEVL---------------------C 175 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~l---------------------~ 175 (368)
+|+|+|||||||+|+.. ....++.++++.+|.. ......+....|......+..++ .
T Consensus 4 ~k~viFDlDGTL~ds~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 2hi0_A 4 YKAAIFDMDGTILDTSA-DLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP 82 (240)
T ss_dssp CSEEEECSBTTTEECHH-HHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred ccEEEEecCCCCccCHH-HHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence 78999999999998664 5567888899999986 33333456777887666665554 1
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC
Q 043738 176 WSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV 255 (368)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v 255 (368)
..........+...+.+.|.........++||+.++|+.|+++|++++++||+....+...++++|+. +|+.+++++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~ 161 (240)
T 2hi0_A 83 EAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSG 161 (240)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCC
Confidence 12345556666666777666654445688999999999999999999999999988899999999998 99999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-ccc--CCCcEEEcCchhhhHHH
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-YEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-~~~--~~ad~vv~sl~eL~~~~ 328 (368)
..+||++++|..+++++|++|++|++|||+.||++||+++|+.+|++.++... .++ ..|+++++++.|+...+
T Consensus 162 ~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 162 IRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp SCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999865432 222 25899999999986544
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=231.59 Aligned_cols=207 Identities=24% Similarity=0.384 Sum_probs=169.3
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc-----CCCHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW-----SRDPAELRRMASRMEE 192 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~~~~~~~~l~~~~~~ 192 (368)
+|+||||+||||+|+. ..+..+|.++++++|++.+... ...+.|....+.+..+... .........+...+..
T Consensus 26 IKaViFDlDGTLvDs~-~~~~~a~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 4gib_A 26 IEAFIFDLDGVITDTA-YYHYMAWRKLAHKVGIDIDTKF-NESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNN 103 (250)
T ss_dssp CCEEEECTBTTTBCCH-HHHHHHHHHHHHTTTCCCCTTG-GGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred hheeeecCCCcccCCH-HHHHHHHHHHHHHcCCCCCHHH-HHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHH
Confidence 8999999999999864 5677889999999998766543 4566677776666555432 2345555666666666
Q ss_pred HHHHHHCC--ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 193 IYQALQGG--IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 193 ~~~~~~~~--~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.+...... ...++||+.++++.|++.|+++++.|+.. .....++++|+..+|+.++++++++..||+|++|..+++
T Consensus 104 ~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~ 181 (250)
T 4gib_A 104 YYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAK 181 (250)
T ss_dssp HHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHH
T ss_pred HHHHHHhhccccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHH
Confidence 66665543 24789999999999999999999988763 456789999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhc
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
++|++|++|++|||+.+|+++|+++||.+|+|.... .+..||++++++.||....+++
T Consensus 182 ~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~---~~~~ad~vi~~l~eL~~~~i~~ 239 (250)
T 4gib_A 182 GLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYE---NLKKANLVVDSTNQLKFEYIQE 239 (250)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTT---TTTTSSEEESSGGGCCHHHHHH
T ss_pred HhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChh---HhccCCEEECChHhCCHHHHHH
Confidence 999999999999999999999999999999997543 3346999999999996555544
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=228.46 Aligned_cols=207 Identities=26% Similarity=0.430 Sum_probs=162.9
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc-----CCCHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW-----SRDPAELRRMASRMEE 192 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~-----~~~~~~~~~l~~~~~~ 192 (368)
+|+|+|||||||+|+.. ....++..+++++|....... ...+.|......+..++.. .........+...+.+
T Consensus 2 ik~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAE-YHFLAWKHIAEQIDIPFDRDM-NERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNR 79 (233)
T ss_dssp CCEEEECSBTTTBCHHH-HHHHHHHHHHHHTTCCCCHHH-HHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcCCCHH-HHHHHHHHHHHHcCCCCCHHH-HHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 68999999999998654 445778888999999876654 5777888887777766654 3556777777777777
Q ss_pred HHHHHHCCcc--ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 193 IYQALQGGIY--RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 193 ~~~~~~~~~~--~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.+........ .++||+.++|+.|++.|++++++||+.. +...++++|+..+|+.+++++++..+||++++|..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~ 157 (233)
T 3nas_A 80 DYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAA 157 (233)
T ss_dssp HHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHH
T ss_pred HHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHH
Confidence 7777655432 4899999999999999999999999854 88899999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhc
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
++|++|++|++|||+.||++||+.+|+.+|++++... +..||++++++.|+....+.+
T Consensus 158 ~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~---~~~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 158 MLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQP---MLGADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp HHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC----------CSEECSSGGGCCHHHHHH
T ss_pred HcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccc---cccCCEEeCChHhCCHHHHHH
Confidence 9999999999999999999999999999999976533 236999999999998665544
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=225.68 Aligned_cols=209 Identities=15% Similarity=0.177 Sum_probs=172.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+|+|+||+||||+|+.. ....++..+++++|........+....|......+...+ .........+...+.+.+..
T Consensus 3 m~k~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 79 (226)
T 3mc1_A 3 LYNYVLFDLDGTLTDSAE-GITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY--NFDEETATVAIDYYRDYFKA 79 (226)
T ss_dssp CCCEEEECSBTTTBCCHH-HHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCccccCHH-HHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh--CCCHHHHHHHHHHHHHHHHH
Confidence 379999999999998764 344677888888888765444456677887777776665 34555566666555555544
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
.......++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.+++++++..+||++++|..+++++|++|
T Consensus 80 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~ 159 (226)
T 3mc1_A 80 KGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKS 159 (226)
T ss_dssp TGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCG
T ss_pred hCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCc
Confidence 33334688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhHHH
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~~~ 328 (368)
++|++|||+.||++||+.+|+.+|++.++.. ...+ ..||++++++.||...+
T Consensus 160 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 160 DDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp GGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred ccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999996553 3333 46999999999997654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=220.73 Aligned_cols=207 Identities=15% Similarity=0.199 Sum_probs=167.3
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
+|+|+||+||||+++.. ....++..+++++|....... .....|......+..+............+...+.+.+...
T Consensus 5 ~k~i~fDlDGTL~~~~~-~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (214)
T 3e58_A 5 VEAIIFDMDGVLFDTEK-YYYDRRASFLGQKGISIDHLP-PSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNN 82 (214)
T ss_dssp CCEEEEESBTTTBCCHH-HHHHHHHHHHHHTTCCCTTSC-HHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHHHS
T ss_pred ccEEEEcCCCCccccHH-HHHHHHHHHHHHcCCCCCHHH-HHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHh
Confidence 78999999999998664 455778888899988665544 4556676666655555543322222334444455555443
Q ss_pred HCC-ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 198 QGG-IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 198 ~~~-~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
... ...++||+.++|+.|++.|++++++||+....++..++++|+..+|+.++++++++.+||++++|..+++++|++|
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 162 (214)
T 3e58_A 83 PLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQA 162 (214)
T ss_dssp CCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCG
T ss_pred hcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCCh
Confidence 322 2478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhH
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSV 326 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~ 326 (368)
++|++|||+.||+.||+.+|+++++++++........|+++++++.||..
T Consensus 163 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 163 SRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp GGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred HHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 99999999999999999999999999976444444669999999999853
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-28 Score=220.99 Aligned_cols=210 Identities=20% Similarity=0.269 Sum_probs=170.4
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHH----HhcCCCHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV----LCWSRDPAELRRMASR 189 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~----l~~~~~~~~~~~l~~~ 189 (368)
+++.+|+|+|||||||+++.. ....++..+++++|........ ....|......+..+ +........+..+...
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMP-YHSEAWHQVMKTHGLDLSREEA-YMHEGRTGASTINIVFQRELGKEATQEEIESIYHE 97 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHH-HHHHHHHHHHHHTTCCCCHHHH-HHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred ccccCCEEEEcCCCCCCCCHH-HHHHHHHHHHHHhCCCCCHHHH-HHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 445689999999999998664 4457788889999998777663 445566655544433 3445566777776666
Q ss_pred HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cEEEeCCCCCCCCCCHHHHHH
Q 043738 190 MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TAIVAAEDVHRGKPDPEMFVY 267 (368)
Q Consensus 190 ~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~iv~~e~v~~~KP~~~~~~~ 267 (368)
+.+.+... ....++||+.++|+.|++.|++++++||.....+...++. |+..+| +.+++++++..+||++++|..
T Consensus 98 ~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~ 174 (243)
T 3qxg_A 98 KSILFNSY--PEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLM 174 (243)
T ss_dssp HHHHHHTS--SCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHH
T ss_pred HHHHHHhc--ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHH
Confidence 65555432 2358899999999999999999999999998888888888 999999 999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccc-c--CCCcEEEcCchhhhHHH
Q 043738 268 AAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYE-L--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 268 ~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~-~--~~ad~vv~sl~eL~~~~ 328 (368)
+++++|++|++|++|||+.||++||+.+|+.+|++.++..... + ..||++++++.||...+
T Consensus 175 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 175 ALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW 238 (243)
T ss_dssp HHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHH
T ss_pred HHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999996654332 2 35999999999997654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-29 Score=224.28 Aligned_cols=211 Identities=13% Similarity=0.169 Sum_probs=175.0
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
|...+|+|+||+||||+++.. ....++..+++++|....... +....|......+...+ .........+...+.+.
T Consensus 25 M~~mik~iifDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 100 (240)
T 3sd7_A 25 MKKNYEIVLFDLDGTLTDPKE-GITKSIQYSLNSFGIKEDLEN-LDQFIGPPLHDTFKEYY--KFEDKKAKEAVEKYREY 100 (240)
T ss_dssp -CCCCSEEEECSBTTTEECHH-HHHHHHHHHHHHTTCCCCGGG-GGGGSSSCHHHHHHHTS--CCCHHHHHHHHHHHHHH
T ss_pred HHHhccEEEEecCCcCccCHH-HHHHHHHHHHHHcCCCCCHHH-HHHHhCccHHHHHHHHh--CCCHHHHHHHHHHHHHH
Confidence 333479999999999998664 445678888899998844333 46666777776666554 34566667777777776
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
+.........++||+.++|+.|++.|++++++||+....++..++.+|+..+|+.++++++.+.+||++.+|..+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g 180 (240)
T 3sd7_A 101 FADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCN 180 (240)
T ss_dssp HHHTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHT
T ss_pred HHHhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcC
Confidence 66644444689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhHHH
Q 043738 274 FI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 274 i~-p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~~~ 328 (368)
++ |++|++|||+.||++||+.+|+.+|++..+.. ...+ ..||++++++.||...+
T Consensus 181 ~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 181 VKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp CCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 99 99999999999999999999999999995543 3333 46999999999997665
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=218.96 Aligned_cols=209 Identities=16% Similarity=0.229 Sum_probs=170.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHh-------cCCCHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLC-------WSRDPAELRRMASR 189 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~-------~~~~~~~~~~l~~~ 189 (368)
++|+|+||+||||+|+.. ....++..+++++|........+..+.|......+...+. .......+......
T Consensus 22 ~~k~iiFDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (243)
T 2hsz_A 22 QFKLIGFDLDGTLVNSLP-DLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQ 100 (243)
T ss_dssp SCSEEEECSBTTTEECHH-HHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred cCCEEEEcCCCcCCCCHH-HHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHHHHHHHHH
Confidence 378999999999998654 4557788888999987544444566777776655544432 22455555566666
Q ss_pred HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHH
Q 043738 190 MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAA 269 (368)
Q Consensus 190 ~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~l 269 (368)
+.+.|.........++||+.++|+.|++.|++++++||+....+...++++|+..+|+.+++++++...||++++|..++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~ 180 (243)
T 2hsz_A 101 FGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLC 180 (243)
T ss_dssp HHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHH
T ss_pred HHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHH
Confidence 66666665555578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cc--ccCCCcEEEcCchhhhH
Q 043738 270 QLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VY--ELGAADLVVRHLDELSV 326 (368)
Q Consensus 270 e~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~--~~~~ad~vv~sl~eL~~ 326 (368)
+++|+++++|++|||+.||+.||+.+|+.+|++.++.. .. ....||++++++.||..
T Consensus 181 ~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~ 240 (243)
T 2hsz_A 181 GKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 240 (243)
T ss_dssp HHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred HHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHH
Confidence 99999999999999999999999999999999986532 11 23459999999999853
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-28 Score=223.18 Aligned_cols=213 Identities=21% Similarity=0.238 Sum_probs=173.9
Q ss_pred CCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHH-------------HhcCCCHH
Q 043738 115 GCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV-------------LCWSRDPA 181 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-------------l~~~~~~~ 181 (368)
++.+|+|+||+||||+++.......++..+++++|+...... .....+......+... +.......
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAE-AREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEE 89 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHH-HHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHH
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHH-HHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHH
Confidence 445899999999999997654435788888889998866655 4555666554444332 23445566
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc-ccEEEeCCCCCCCCC
Q 043738 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY-FTAIVAAEDVHRGKP 260 (368)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~-Fd~iv~~e~v~~~KP 260 (368)
.+..+...+.+.+.........++||+.++|+.|++.|++++++||.....+...++.+|+..+ |+.+++++++..+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp 169 (277)
T 3iru_A 90 DIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRP 169 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSSCTT
T ss_pred HHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCCCCC
Confidence 6667777776666665554568899999999999999999999999999999999999999888 999999999999999
Q ss_pred CHHHHHHHHHHcCCCC-CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC------------------------cccc--CC
Q 043738 261 DPEMFVYAAQLLKFIP-ERCIVFGNSNQTVEAAHDARMKCVAVASKHP------------------------VYEL--GA 313 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p-~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~------------------------~~~~--~~ 313 (368)
++.+|..+++++|++| ++|++|||+.||++||+.+|+.+|+|.++.. ..++ ..
T Consensus 170 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 249 (277)
T 3iru_A 170 FPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAG 249 (277)
T ss_dssp SSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCC
Confidence 9999999999999999 9999999999999999999999999997643 1222 24
Q ss_pred CcEEEcCchhhhHHH
Q 043738 314 ADLVVRHLDELSVVD 328 (368)
Q Consensus 314 ad~vv~sl~eL~~~~ 328 (368)
||++++++.||...+
T Consensus 250 ad~v~~~~~el~~~l 264 (277)
T 3iru_A 250 AHYVIDSVADLETVI 264 (277)
T ss_dssp CSEEESSGGGTHHHH
T ss_pred CCEEecCHHHHHHHH
Confidence 999999999997654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=224.63 Aligned_cols=212 Identities=21% Similarity=0.304 Sum_probs=168.1
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
+++.+|+|+||+||||+++.. ....++.++++++|....... ...+.|......+..++...........+...+.+.
T Consensus 26 ~~~~ik~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 3l5k_A 26 PPQPVTHLIFDMDGLLLDTER-LYSVVFQEICNRYDKKYSWDV-KSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTK 103 (250)
T ss_dssp CCCCCSEEEEETBTTTBCHHH-HHHHHHHHHHHHTTCCCCHHH-HHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHHH
T ss_pred cccCCcEEEEcCCCCcCCCHH-HHHHHHHHHHHHhCCCCCHHH-HHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 345689999999999998654 455778888999998876655 466778777776665543221111223333444555
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCccccccEEEeCC--CCCCCCCCHHHHHHHHH
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS-IGIEEYFTAIVAAE--DVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~gl~~~Fd~iv~~e--~v~~~KP~~~~~~~~le 270 (368)
+..... ...++||+.++|+.|++.|++++++||+....+...+.. +|+..+|+.+++++ ++..+||++++|..+++
T Consensus 104 ~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~ 182 (250)
T 3l5k_A 104 LKEVFP-TAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAK 182 (250)
T ss_dssp HHHHGG-GCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHH
T ss_pred HHHHhc-cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHH
Confidence 555443 368999999999999999999999999988877776654 58899999999999 89999999999999999
Q ss_pred HcCCCC--CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchhhhHHH
Q 043738 271 LLKFIP--ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDELSVVD 328 (368)
Q Consensus 271 ~lgi~p--~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~eL~~~~ 328 (368)
++|+++ ++|++|||+.||++||+++|+.+|+++++....+. ..||++++++.||...+
T Consensus 183 ~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 183 RFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp TSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGG
T ss_pred HcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHH
Confidence 999998 99999999999999999999999999976644333 45999999999995443
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=221.77 Aligned_cols=206 Identities=16% Similarity=0.157 Sum_probs=165.2
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCC-CCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKS-PPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
+|+|+||+||||+|+.. ....++..+++++|.. ..... +....|......+..++.. .....+...+.+.+..
T Consensus 3 ~k~viFDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 76 (222)
T 2nyv_A 3 LRVILFDLDGTLIDSAK-DIALALEKTLKELGLEEYYPDN-VTKYIGGGVRALLEKVLKD----KFREEYVEVFRKHYLE 76 (222)
T ss_dssp ECEEEECTBTTTEECHH-HHHHHHHHHHHHTTCGGGCCSC-GGGGCSSCHHHHHHHHHGG----GCCTHHHHHHHHHHHH
T ss_pred CCEEEECCCCcCCCCHH-HHHHHHHHHHHHcCCCCCCHHH-HHHHhCcCHHHHHHHHhCh----HHHHHHHHHHHHHHHH
Confidence 68999999999998654 4456778888888875 22222 3455677777766666531 1122333444555554
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
.......++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.+++++++...||++++|..+++++|++|
T Consensus 77 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 156 (222)
T 2nyv_A 77 NPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEP 156 (222)
T ss_dssp CSCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCG
T ss_pred hccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCc
Confidence 43445689999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHH
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l 329 (368)
++|++|||+.+|+.+|+.+|+.+|++.++........++++++++.++...+.
T Consensus 157 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l~ 209 (222)
T 2nyv_A 157 EKALIVGDTDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLMD 209 (222)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCCCCCSEEESSTTHHHHHHH
T ss_pred hhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccccCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999999865432222569999999999976543
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-28 Score=218.95 Aligned_cols=212 Identities=18% Similarity=0.242 Sum_probs=168.2
Q ss_pred CCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHH----HhcCCCHHHHHHHHHHH
Q 043738 115 GCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV----LCWSRDPAELRRMASRM 190 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~----l~~~~~~~~~~~l~~~~ 190 (368)
++.+|+|+||+||||+++.. ....++.++++++|........ ....|......+..+ +........+..+...+
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMP-NHAESWHKIMKRFGFGLSREEA-YMHEGRTGASTINIVSRRERGHDATEEEIKAIYQAK 97 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHH-HHHHHHHHHHHHTTCCCCHHHH-HHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCccCcCHH-HHHHHHHHHHHHcCCCCCHHHH-HHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 34689999999999998664 4457788889999998777653 445566655544433 34445666666665555
Q ss_pred HHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cEEEeCCCCCCCCCCHHHHHHH
Q 043738 191 EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TAIVAAEDVHRGKPDPEMFVYA 268 (368)
Q Consensus 191 ~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~iv~~e~v~~~KP~~~~~~~~ 268 (368)
...+... ....++||+.++|+.|++.|++++++||+....+...+++ |+..+| +.+++++++..+||++++|..+
T Consensus 98 ~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~ 174 (247)
T 3dv9_A 98 TEEFNKC--PKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMA 174 (247)
T ss_dssp HHHHTTS--CCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHH
T ss_pred HHHHHhc--ccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHH
Confidence 5444322 2358899999999999999999999999998888888998 999999 9999999999999999999999
Q ss_pred HHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccc-c--CCCcEEEcCchhhhHHHHhc
Q 043738 269 AQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYE-L--GAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 269 le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~-~--~~ad~vv~sl~eL~~~~l~~ 331 (368)
++++|++|++|++|||+.||++||+.+|+.+|++.++..... + ..||++++++.||...+.+.
T Consensus 175 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~ 240 (247)
T 3dv9_A 175 LKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNWETL 240 (247)
T ss_dssp HHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHHHHH
T ss_pred HHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999996654332 2 25999999999997655433
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-28 Score=216.64 Aligned_cols=209 Identities=21% Similarity=0.237 Sum_probs=173.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEEI 193 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~~ 193 (368)
.+|+|+||+||||+++.. ....++..+++++|.......+ ....+......+..++.. ......+..+...+.+.
T Consensus 5 ~~k~i~fDlDGTL~~~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVY-QNVAAWKEALDAENIPLAMWRI-HRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQA 82 (233)
T ss_dssp CCCEEEECCBTTTEECHH-HHHHHHHHHHHHTTCCCCHHHH-HHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHHHH
T ss_pred cCcEEEEcCCCccccChH-HHHHHHHHHHHHcCCCCCHHHH-HHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 479999999999998754 5557788889999998877664 555788777766666543 24456666666666666
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
+..... ...++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.+++++++..+||++.+|..+++++|
T Consensus 83 ~~~~~~-~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~ 161 (233)
T 3s6j_A 83 YERLQH-QIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIG 161 (233)
T ss_dssp HHHTGG-GCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTT
T ss_pred HHHhhc-cCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhC
Confidence 655432 3688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC-CCccccC--CCcEEEcCchhhhHHH
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMKCVAVASK-HPVYELG--AADLVVRHLDELSVVD 328 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~-~~~~~~~--~ad~vv~sl~eL~~~~ 328 (368)
++|++|++|||+.||+.||+.+|+.+|++..+ +....+. .||++++++.||...+
T Consensus 162 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 162 APIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred CCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 99999999999999999999999999999854 4433332 3999999999996543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-28 Score=221.20 Aligned_cols=209 Identities=22% Similarity=0.303 Sum_probs=172.7
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHH---hcCCCHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVL---CWSRDPAELRRMASRMEE 192 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l---~~~~~~~~~~~l~~~~~~ 192 (368)
+.+|+|+||+||||+|+.. ....++.++++++|...........+.|......+..+. ........+..+...+.+
T Consensus 26 ~~ik~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEG-IIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPDFLDVLETRFNA 104 (259)
T ss_dssp CCCSEEEEESBTTTEECHH-HHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTTHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCcccCHH-HHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 4689999999999998664 455778888999999888877778888888877776644 333344444444433333
Q ss_pred HHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccE-EEeCCCCC-CCCCCHHHHHHHHH
Q 043738 193 IYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA-IVAAEDVH-RGKPDPEMFVYAAQ 270 (368)
Q Consensus 193 ~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~-iv~~e~v~-~~KP~~~~~~~~le 270 (368)
.+ ....++||+.++|+.|++.|++++++||.....++..++++|+..+|+. ++++++++ .+||++++|..+++
T Consensus 105 ~~-----~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~ 179 (259)
T 4eek_A 105 AM-----TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQ 179 (259)
T ss_dssp HH-----TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHH
T ss_pred Hh-----ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHH
Confidence 33 4468999999999999999999999999999999999999999999999 99999999 99999999999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-----ccc--CCCcEEEcCchhhhHHHHh
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-----YEL--GAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-----~~~--~~ad~vv~sl~eL~~~~l~ 330 (368)
++|++|++|++|||+.||++||+++|+.+|++..+... ..+ ..||++++++.||...+..
T Consensus 180 ~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~ 246 (259)
T 4eek_A 180 QLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAE 246 (259)
T ss_dssp HTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHH
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHHh
Confidence 99999999999999999999999999999999854322 122 3499999999999766643
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=214.09 Aligned_cols=207 Identities=17% Similarity=0.168 Sum_probs=158.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCC---CHHHHHHHHhCC-------------CHHHH----HHHHHhc
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSP---PPAFILRRIEGM-------------KNEQA----ISEVLCW 176 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~---~~~~~~~~~~g~-------------~~~~~----~~~~l~~ 176 (368)
.+|+|+||+||||+++.. ....++..+++++|... ....+...+.+. ..... +...+..
T Consensus 4 ~~k~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWAFSR-NARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA 82 (240)
T ss_dssp CCSEEEECCBTTTBCHHH-HHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCCcCchh-hHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 489999999999998654 44567788888888875 554443333221 11111 1111111
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC
Q 043738 177 SRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH 256 (368)
Q Consensus 177 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~ 256 (368)
.... .......+.+.+.........++||+.++|+.|+ .|++++++||+....+...++.+|+..+|+.++++++++
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~ 159 (240)
T 3qnm_A 83 VGVE--DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG 159 (240)
T ss_dssp TTCC--CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTT
T ss_pred cCCC--cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCC
Confidence 1100 1122333444444444444688999999999999 899999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHH
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVV 327 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~ 327 (368)
.+||++.+|..+++++|++|++|++|||+. ||++||+++|+++++++++........||++++++.|+...
T Consensus 160 ~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 160 VLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp CCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 999999999999999999999999999996 99999999999999999766433334699999999999644
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=207.95 Aligned_cols=211 Identities=15% Similarity=0.180 Sum_probs=158.8
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHH-----HHHHH-
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAE-----LRRMA- 187 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~-----~~~l~- 187 (368)
||+.+|+|+||+||||+++.. ....++.++++++|........ ....+.. ......+......... +..+.
T Consensus 3 ~mm~~k~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (238)
T 3ed5_A 3 AMKRYRTLLFDVDDTILDFQA-AEALALRLLFEDQNIPLTNDMK-AQYKTIN-QGLWRAFEEGKMTRDEVVNTRFSALLK 79 (238)
T ss_dssp -CCCCCEEEECCBTTTBCHHH-HHHHHHHHHHHHTTCCCCHHHH-HHHHHHH-HHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred ccccCCEEEEcCcCcCcCCch-hHHHHHHHHHHHcCCCcchHHH-HHHHHHH-HHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 455689999999999998654 4456788888999988765432 2111110 0111111111111111 11111
Q ss_pred --------HHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCC
Q 043738 188 --------SRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGK 259 (368)
Q Consensus 188 --------~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~K 259 (368)
..+.+.|.........++||+.++|+.|++. ++++++||.....+...++++|+..+|+.++++++++.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~k 158 (238)
T 3ed5_A 80 EYGYEADGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQK 158 (238)
T ss_dssp HTTCCCCHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSCT
T ss_pred HcCCCCcHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCCC
Confidence 2334455555555578999999999999999 9999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcC-CCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCcc-ccCCCcEEEcCchhhhHHH
Q 043738 260 PDPEMFVYAAQLLK-FIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPVY-ELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 260 P~~~~~~~~le~lg-i~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~~-~~~~ad~vv~sl~eL~~~~ 328 (368)
|++.+|..+++++| ++|++|++|||+. ||++||+.+|+++|+++.+.... ....||++++++.||...+
T Consensus 159 p~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 159 PMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp TCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred CChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 99999999999999 9999999999998 99999999999999998654332 3345999999999997654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=206.81 Aligned_cols=209 Identities=19% Similarity=0.265 Sum_probs=168.9
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (368)
+|+|+||+||||+++...+ ..++.++++++|........+....|.........++... .......+...+...+...
T Consensus 6 ~k~v~fDlDGTL~d~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 83 (225)
T 3d6j_A 6 YTVYLFDFDYTLADSSRGI-VTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGIT-DADQLESFRQEYSKEADIY 83 (225)
T ss_dssp CSEEEECCBTTTEECHHHH-HHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCCHHHH-HHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHh
Confidence 7899999999999876444 4667888888888654334456667777777776665433 4455556666666666655
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
......+.|++.++++.+++.|++++++|+.....+...++.+|+..+|+.++++++....||++.++..+++++|++++
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 163 (225)
T 3d6j_A 84 MNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPE 163 (225)
T ss_dssp TGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCGG
T ss_pred ccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCChH
Confidence 54456789999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCC-CccccC--CCcEEEcCchhhhHHH
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYELG--AADLVVRHLDELSVVD 328 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~~--~ad~vv~sl~eL~~~~ 328 (368)
+|++|||+.||++||+.+|+.++++..+. ...++. .||++++++.|+...+
T Consensus 164 ~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 164 EVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC---
T ss_pred HeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhh
Confidence 99999999999999999999999998543 333332 3899999999996544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=209.28 Aligned_cols=201 Identities=17% Similarity=0.250 Sum_probs=160.5
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+|+|+||+||||+|+.. ....++.++++++|....... .....|....+.+..+ . .....+.... .+.+..
T Consensus 3 ~~k~iifDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~-~--~~~~~~~~~~---~~~~~~ 74 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQP-AYTTVMREVLATYGKPFSPAQ-AQKTFPMAAEQAMTEL-G--IAASEFDHFQ---AQYEDV 74 (209)
T ss_dssp CCSEEEECSBTTTEECHH-HHHHHHHHHHHTTTCCCCHHH-HHHHTTSCHHHHHHHT-T--CCGGGHHHHH---HHHHHH
T ss_pred cccEEEEcCCCCCcCCHH-HHHHHHHHHHHHhCCCCCHHH-HHHHcCCcHHHHHHHc-C--CCHHHHHHHH---HHHHHH
Confidence 368999999999998764 445677888888888666655 4666787776666553 2 2222222222 222222
Q ss_pred HHC--CccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 197 LQG--GIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 197 ~~~--~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
... ....++||+.++|+.|+++ ++++++||+....++..++++|+..+|+.++++++.+..||++++|..+++++|+
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~ 153 (209)
T 2hdo_A 75 MASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNV 153 (209)
T ss_dssp HTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTC
T ss_pred HhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCC
Confidence 221 3368899999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-CccccCCCcEEEcCchhhhH
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYELGAADLVVRHLDELSV 326 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~~~ad~vv~sl~eL~~ 326 (368)
+|++|++|||+.||++||+.+|+.+++++++. ....+..|++++.++.||..
T Consensus 154 ~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 206 (209)
T 2hdo_A 154 APQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 206 (209)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred CcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhccCCEEeCCHHHHHH
Confidence 99999999999999999999999999998443 34444449999999999853
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=213.07 Aligned_cols=200 Identities=18% Similarity=0.263 Sum_probs=157.2
Q ss_pred CCceEEEEeccCccccCcchHHHHHH-HHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAW-LTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~-~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
+.+|+|+||+||||+|+...+. .++ .++++++|..... +....+......+...+.. ........+.+.+
T Consensus 23 ~~~k~i~fDlDGTL~d~~~~~~-~~~~~~~~~~~g~~~~~---~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 93 (231)
T 3kzx_A 23 KQPTAVIFDWYNTLIDTSINID-RTTFYQVLDQMGYKNID---LDSIPNSTIPKYLITLLGK-----RWKEATILYENSL 93 (231)
T ss_dssp CCCSEEEECTBTTTEETTSSCC-HHHHHHHHHHTTCCCCC---CTTSCTTTHHHHHHHHHGG-----GHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCcCCchhHH-HHHHHHHHHHcCCCHHH---HHHHhCccHHHHHHHHhCc-----hHHHHHHHHHHHH
Confidence 3489999999999998775554 455 8888888876521 2334455555555555432 1223333344444
Q ss_pred H-HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 195 Q-ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 195 ~-~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
. ........++||+.++|+.|++.|++++++||.....+...++.+|+..+|+.++++++++.+||++++|..+++++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lg 173 (231)
T 3kzx_A 94 EKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNIN 173 (231)
T ss_dssp HHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHT
T ss_pred hhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcC
Confidence 4 223344688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-cEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHH
Q 043738 274 FIPE-RCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 274 i~p~-~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
++|+ +|++|||+.||++||+++|+.+|++..... ..+++++.++.||...+
T Consensus 174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 9999 999999999999999999999999965543 24789999999997654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=205.35 Aligned_cols=206 Identities=23% Similarity=0.388 Sum_probs=165.7
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCC-CCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKS-PPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEEI 193 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~~ 193 (368)
+|+|+||+||||+|+.. ....++..+++++|.. .... ......|......+..++.. .........+...+.+.
T Consensus 2 ~k~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAE-YHFRAWKALAEEIGINGVDRQ-FNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDN 79 (221)
T ss_dssp CCEEEECCBTTTBTHHH-HHHHHHHHHHHHTTCCCCSHH-HHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChH-HHHHHHHHHHHHcCCCCCCHH-HHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Confidence 68999999999998654 3446678888888887 4443 34556777766665555432 24556666666666666
Q ss_pred HHHHHCC--ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 194 YQALQGG--IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 194 ~~~~~~~--~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
+...... ...++|++.++|+.+++.|++++++|+. ..+...++.+|+..+|+.++++++++..||++++|..++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 157 (221)
T 2wf7_A 80 YVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHA 157 (221)
T ss_dssp HHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHH
T ss_pred HHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHH
Confidence 6655433 3578899999999999999999999998 55678889999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHh
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~ 330 (368)
+|++|++|++|||+.||++||+.+|+.+++++... ++..||++++++.|+....+.
T Consensus 158 lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~---~~~~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE---DLGDDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH---HHCSSSEEESSGGGCCHHHHH
T ss_pred cCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHH---HhccccchhcCHHhCCHHHHH
Confidence 99999999999999999999999999999996432 334699999999999766543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-27 Score=207.75 Aligned_cols=213 Identities=22% Similarity=0.302 Sum_probs=162.5
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW-SRDPAELRRMASRMEEIYQ 195 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~~~~ 195 (368)
.+|+|+||+||||+++... ...++..+++++|........+....|.........++.. .........+...+...+.
T Consensus 8 ~~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAI 86 (226)
T ss_dssp CCCEEEECCBTTTBCCHHH-HHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcCcCHHH-HHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHH
Confidence 4799999999999986644 4466778888888765422223344566655555444322 1111122233333333333
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
........++|++.++|+.+++.|++++++|+.....+...++.+|+..+|+.++++++.+..||++.++..+++++|++
T Consensus 87 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~ 166 (226)
T 1te2_A 87 SLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD 166 (226)
T ss_dssp HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC
T ss_pred HHHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCC
Confidence 33323357889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cc-ccCCCcEEEcCchhhhHHHHh
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VY-ELGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~-~~~~ad~vv~sl~eL~~~~l~ 330 (368)
+++|++|||+.||++||+.+|++++++.++.. .. ....|++++.++.||....+.
T Consensus 167 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~~~~ 223 (226)
T 1te2_A 167 PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLL 223 (226)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHHHH
T ss_pred HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHHHhc
Confidence 99999999999999999999999999985543 22 234599999999999776554
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-26 Score=206.77 Aligned_cols=208 Identities=15% Similarity=0.223 Sum_probs=161.7
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHH-hCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCC-----HHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQE-EGKSPPPAFILRRIEGMKNEQAISEVLCWSRD-----PAELRRMASRME 191 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~-~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-----~~~~~~l~~~~~ 191 (368)
+|+|+|||||||+|+... ...++.+++++ +|.... . ......|......+..++..... ...+..+...+.
T Consensus 4 ~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~~g~~~~-~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVESM-NRRVLADALIEVYGTEGS-T-GSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYI 80 (234)
T ss_dssp CEEEEECCBTTTEEECTH-HHHHHHHHHHHHHSCCCC-C----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCCCcccCccc-hHHHHHHHHHHHhCCCCc-c-chhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHH
Confidence 799999999999997654 44667777777 687655 2 24456677766655555543222 223455555555
Q ss_pred HHHHHHHC-CccccCccHHHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC-CCCCCHHHHHHH
Q 043738 192 EIYQALQG-GIYRLRTGSKEFVNILMHY-KIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH-RGKPDPEMFVYA 268 (368)
Q Consensus 192 ~~~~~~~~-~~~~~~pg~~elL~~Lk~~-Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~-~~KP~~~~~~~~ 268 (368)
..+..... ....++||+.++|+.|+++ |++++++||+....+...++.+|+..+|+.++++++.. ..||++.+|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~ 160 (234)
T 2hcf_A 81 ALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERA 160 (234)
T ss_dssp HHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHH
T ss_pred HHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHH
Confidence 55555443 3467899999999999999 99999999999999999999999999999888877764 467889999999
Q ss_pred HHHcC--CCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-ccc--CCCcEEEcCchhhhHHH
Q 043738 269 AQLLK--FIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-YEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 269 le~lg--i~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-~~~--~~ad~vv~sl~eL~~~~ 328 (368)
++++| ++|++|++|||+.||++||+.+|+.+|++.++... ... ..|+++++++.||...+
T Consensus 161 ~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 161 RRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred HHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 99999 99999999999999999999999999999865443 222 23899999999997654
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-26 Score=210.04 Aligned_cols=210 Identities=19% Similarity=0.271 Sum_probs=165.6
Q ss_pred CceEEEEeccCccccCcc-hHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHH-------------HhcCCCHHH
Q 043738 117 GWLGAIFEWEGVIIEDNP-DLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEV-------------LCWSRDPAE 182 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~-~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-------------l~~~~~~~~ 182 (368)
.+|+|+||+||||+|+.. .+. .++..+++++|....... .....|.........+ +........
T Consensus 5 ~ik~i~fDlDGTLld~~~~~~~-~~~~~~l~~~G~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (267)
T 1swv_A 5 KIEAVIFAWAGTTVDYGCFAPL-EVFMEIFHKRGVAITAEE-ARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEAD 82 (267)
T ss_dssp CCCEEEECSBTTTBSTTCCTTH-HHHHHHHHTTTCCCCHHH-HHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHH
T ss_pred CceEEEEecCCCEEeCCCccHH-HHHHHHHHHcCCCCCHHH-HHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHHH
Confidence 479999999999999765 333 667888888998766554 4455666554443322 222334455
Q ss_pred HHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCCCCC
Q 043738 183 LRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRGKPD 261 (368)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~KP~ 261 (368)
...+...+...+.........++||+.++|+.+++.|++++++|+.....+...++++|+..+| +.+++++++..+||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~ 162 (267)
T 1swv_A 83 IQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPY 162 (267)
T ss_dssp HHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTS
T ss_pred HHHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccCCCCCC
Confidence 5555555555555544444678999999999999999999999999988999999999988886 999999999999999
Q ss_pred HHHHHHHHHHcCCCC-CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc------------------------ccc--CCC
Q 043738 262 PEMFVYAAQLLKFIP-ERCIVFGNSNQTVEAAHDARMKCVAVASKHPV------------------------YEL--GAA 314 (368)
Q Consensus 262 ~~~~~~~le~lgi~p-~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~------------------------~~~--~~a 314 (368)
+.+|..+++++|+++ ++|++|||+.||++||+.+|+.++++.+++.. .++ ..|
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 242 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGA 242 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCC
Confidence 999999999999999 99999999999999999999999999976541 111 249
Q ss_pred cEEEcCchhhhHHH
Q 043738 315 DLVVRHLDELSVVD 328 (368)
Q Consensus 315 d~vv~sl~eL~~~~ 328 (368)
|++++++.||...+
T Consensus 243 d~v~~~~~el~~~l 256 (267)
T 1swv_A 243 HFTIETMQELESVM 256 (267)
T ss_dssp SEEESSGGGHHHHH
T ss_pred ceeccCHHHHHHHH
Confidence 99999999997654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=201.70 Aligned_cols=198 Identities=14% Similarity=0.190 Sum_probs=157.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC-CCHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG-MKNEQAISEVLC-WSRDPAELRRMASRMEEIYQ 195 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g-~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~~~~ 195 (368)
+|+|+||+||||+++... ...++.++++++|....... .....| ......+..+.. .... ......+...+.
T Consensus 4 ~k~i~fDlDGTL~~~~~~-~~~~~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 77 (207)
T 2go7_A 4 KTAFIWDLDGTLLDSYEA-ILSGIEETFAQFSIPYDKEK-VREFIFKYSVQDLLVRVAEDRNLD----VEVLNQVRAQSL 77 (207)
T ss_dssp CCEEEECTBTTTEECHHH-HHHHHHHHHHHHTCCCCHHH-HHHHHHHSCHHHHHHHHHHHHTCC----HHHHHHHHHHHH
T ss_pred ccEEEEeCCCcccccHHH-HHHHHHHHHHHcCCCCCHHH-HHHHHccccHHHHHHHhhchhhcc----HHHHHHHHHHHH
Confidence 689999999999987643 44667788888888666554 455556 555555554431 1111 222223333343
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
........+.|++.++|+.+++.|++++++|+.....+. .++.+++..+|+.++++++.+..||+++++..+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~ 156 (207)
T 2go7_A 78 AEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLN 156 (207)
T ss_dssp TTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCC
T ss_pred HhccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCC
Confidence 333334578999999999999999999999999988888 9999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHH
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVV 327 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~ 327 (368)
+++|++|||+.||++||+.+|+.+|++.++. . .|+++++++.|+...
T Consensus 157 ~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 157 SDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred cccEEEECCCHHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 9999999999999999999999999988665 2 589999999998653
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=213.59 Aligned_cols=210 Identities=17% Similarity=0.241 Sum_probs=159.2
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH-----------------hCCCHHHHHHHHH----hc
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI-----------------EGMKNEQAISEVL----CW 176 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~-----------------~g~~~~~~~~~~l----~~ 176 (368)
+|+|+||+||||+++...+ ..++..+++++|.......+...+ .|......+...+ ..
T Consensus 1 ik~iiFDlDGTL~d~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPL-GEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHL 79 (263)
T ss_dssp CCEEEECCBTTTEEESSCH-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCH-HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHH
Confidence 4789999999999866544 467888899999987765543322 2444433332221 11
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCC-ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC
Q 043738 177 SRDPAELRRMASRMEEIYQALQGG-IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV 255 (368)
Q Consensus 177 ~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v 255 (368)
... .....+.......+...... ...++||+.++|+.|++.|++++++||+.. .+...++.+|+..+|+.+++++++
T Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~ 157 (263)
T 3k1z_A 80 AGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSEAA 157 (263)
T ss_dssp TTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEEHHHH
T ss_pred cCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEeeccc
Confidence 110 01122223344444444332 257899999999999999999999999876 468899999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCccc----cCCCcEEEcCchhhhHHHHh
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPVYE----LGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~~~----~~~ad~vv~sl~eL~~~~l~ 330 (368)
+..||++.+|..+++++|++|++|++|||+. +|+.||+++|+.+|+++++..... ...|+++++++.||...+.+
T Consensus 158 ~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~~ 237 (263)
T 3k1z_A 158 GWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALDC 237 (263)
T ss_dssp SSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999997 999999999999999997654332 23599999999999765543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.5e-26 Score=204.35 Aligned_cols=205 Identities=14% Similarity=0.117 Sum_probs=152.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHH--HHHHH----------hCCCHH---HHHHHHHhc-CCCHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAF--ILRRI----------EGMKNE---QAISEVLCW-SRDPA 181 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~--~~~~~----------~g~~~~---~~~~~~l~~-~~~~~ 181 (368)
+|+|+||+||||+|+.. ....++.++++++|....... .+... .|.... ..+..+... .....
T Consensus 4 ~k~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (235)
T 2om6_A 4 VKLVTFDVWNTLLDLNI-MLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVDVE 82 (235)
T ss_dssp CCEEEECCBTTTBCHHH-HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCCHH
T ss_pred ceEEEEeCCCCCCCcch-hHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCCHH
Confidence 68999999999998654 444667788888887643322 01111 133332 233232211 22222
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCC---hHHHHHHHHHcCccccccEEEeCCCCCCC
Q 043738 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHP---RKTLETAIDSIGIEEYFTAIVAAEDVHRG 258 (368)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~---~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~ 258 (368)
....+.. .+...... ..++|++.++|+.|+++|++++++||.. ...+...++.+|+..+|+.++++++++..
T Consensus 83 ~~~~~~~----~~~~~~~~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~ 157 (235)
T 2om6_A 83 LVKRATA----RAILNVDE-SLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLSY 157 (235)
T ss_dssp HHHHHHH----HHHHHCCG-GGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTCC
T ss_pred HHHHHHH----HHHHhccc-cCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCCC
Confidence 2222221 22222222 2469999999999999999999999998 88889999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchhhhHHH
Q 043738 259 KPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDELSVVD 328 (368)
Q Consensus 259 KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~eL~~~~ 328 (368)
||++++|..+++++|++|++|++|||+. ||++||+.+|+.++++++++...+. ..++++++++.||...+
T Consensus 158 kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 158 KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp TTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred CCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 9999999999999999999999999999 9999999999999999966543332 34899999999996543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.6e-26 Score=205.15 Aligned_cols=206 Identities=15% Similarity=0.150 Sum_probs=151.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhC---CCCCHHHHHHHHh-CC-----CHHHHHHHHHhc--C-CCHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEG---KSPPPAFILRRIE-GM-----KNEQAISEVLCW--S-RDPAELRR 185 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g---~~~~~~~~~~~~~-g~-----~~~~~~~~~l~~--~-~~~~~~~~ 185 (368)
+|+|+|||||||+|+.. ....++..++++++ ...........+. +. .....+..++.. . ........
T Consensus 2 ~k~iiFDlDGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSK-LAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWISA 80 (241)
T ss_dssp CCEEEECSBTTTBCHHH-HHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHHHH
T ss_pred ccEEEEcCCCCCCCChh-hHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHHHH
Confidence 68999999999998664 34456677776653 4444433332221 10 001112222211 1 11222222
Q ss_pred HHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHH
Q 043738 186 MASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMF 265 (368)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~ 265 (368)
+ .+.|.........++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.++++++++.+||++++|
T Consensus 81 ~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~ 156 (241)
T 2hoq_A 81 G----VIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIF 156 (241)
T ss_dssp H----HHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHH
T ss_pred H----HHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHH
Confidence 2 223333222235789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCc-cccC---CCcEEEcCchhhhHHH
Q 043738 266 VYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPV-YELG---AADLVVRHLDELSVVD 328 (368)
Q Consensus 266 ~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~-~~~~---~ad~vv~sl~eL~~~~ 328 (368)
..+++++|++|++|++|||+. ||+.||+.+|+.++++.++... .... .+|++++++.||...+
T Consensus 157 ~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 157 KKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp HHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHH
T ss_pred HHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHH
Confidence 999999999999999999998 9999999999999999755432 2222 5899999999997654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-26 Score=202.17 Aligned_cols=189 Identities=14% Similarity=0.211 Sum_probs=146.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+|+|+||+||||+++.. .|..+++++|...... ....+.+.... .. .....+...+..
T Consensus 5 ~~k~iifDlDGTL~d~~~-----~~~~~~~~~g~~~~~~-~~~~~~~~~~~--------------~~-~~~~~~~~~~~~ 63 (205)
T 3m9l_A 5 EIKHWVFDMDGTLTIAVH-----DFAAIREALSIPAEDD-ILTHLAALPAD--------------ES-AAKHAWLLEHER 63 (205)
T ss_dssp GCCEEEECTBTTTEEEEE-----CHHHHHHHTTCCTTSC-HHHHHHHSCHH--------------HH-HHHHHHHHHTHH
T ss_pred cCCEEEEeCCCcCcccHH-----HHHHHHHHhCCCchHH-HHHHHhcCChH--------------HH-HHHHHHHHHHHH
Confidence 479999999999998664 3456777888765422 12222222111 11 111222223333
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
.......++||+.++|+.|++.|++++++||+....++..++.+|+..+| +.+++++. ..+||++.+|..+++++|+
T Consensus 64 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g~ 142 (205)
T 3m9l_A 64 DLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWDV 142 (205)
T ss_dssp HHEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTTC
T ss_pred HHhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcCC
Confidence 33344688999999999999999999999999999999999999999999 78887766 8899999999999999999
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHH
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
++++|++|||+.||++||+.+|+.+|++..+..... ..||++++++.||...+
T Consensus 143 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~-~~ad~v~~~~~el~~~~ 195 (205)
T 3m9l_A 143 SPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWP-ELTDWHARDCAQLRDLL 195 (205)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCG-GGCSEECSSHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCccc-ccCCEEeCCHHHHHHHH
Confidence 999999999999999999999999999986654222 24999999999996654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.8e-26 Score=205.30 Aligned_cols=207 Identities=16% Similarity=0.172 Sum_probs=151.9
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCC----HHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD----PAELRRMASRME 191 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~----~~~~~~l~~~~~ 191 (368)
+.+|+|+||+||||+|+... ...++..+++++|...........+.+..... ...+...... ..........+.
T Consensus 20 m~ik~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (254)
T 3umc_A 20 QGMRAILFDVFGTLVDWRSS-LIEQFQALERELGGTLPCVELTDRWRQQYKPA-MDRVRNGQAPWQHLDQLHRQSLEALA 97 (254)
T ss_dssp SSCCEEEECCBTTTEEHHHH-HHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHH-HHHHHTTSSCCCCHHHHHHHHHHHHH
T ss_pred cCCcEEEEeCCCccEecCcc-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHhcccCCcccHHHHHHHHHHHHH
Confidence 35899999999999986543 44678888899998877766555544422221 1112111100 000111111100
Q ss_pred ------------HHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCC
Q 043738 192 ------------EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGK 259 (368)
Q Consensus 192 ------------~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~K 259 (368)
..+.... ....++|++.++|+.|++. ++++++||.....+...++.+|+. |+.++++++++.+|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~~~k 173 (254)
T 3umc_A 98 GEFGLALDEALLQRITGFW-HRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFGHYK 173 (254)
T ss_dssp HHTTCCCCHHHHHHHHGGG-GSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHTCCT
T ss_pred HHhCCCCCHHHHHHHHHHH-hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccccCC
Confidence 0111111 2257899999999999986 999999999999999999999986 99999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEc----CCC-Ccccc---CCCcEEEcCchhhhHHH
Q 043738 260 PDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA----SKH-PVYEL---GAADLVVRHLDELSVVD 328 (368)
Q Consensus 260 P~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~----~~~-~~~~~---~~ad~vv~sl~eL~~~~ 328 (368)
|++.+|..+++++|++|++|++|||+.||++||+.+|+.+++++ .+. ...++ ..||++++++.||...+
T Consensus 174 p~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 174 PDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 99999999999999999999999999999999999999999998 222 22232 35999999999997655
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=201.47 Aligned_cols=204 Identities=21% Similarity=0.338 Sum_probs=159.3
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEEI 193 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~~ 193 (368)
.+|+|+||+||||+++.. ....++..+++++|.............|....+.+..+... ............ .
T Consensus 3 ~ik~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 77 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEI-IAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEK----L 77 (229)
T ss_dssp CCSEEEECSBTTTBCCHH-HHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHHHH----H
T ss_pred CccEEEEcCCCCcCccHH-HHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHHHHHHHHH----H
Confidence 378999999999998764 34466778888899887755656777788777766655432 222233333222 2
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCC--CCCHHHHHHHHH
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRG--KPDPEMFVYAAQ 270 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~--KP~~~~~~~~le 270 (368)
+.........++|++.++|+.++. +++++|++....+...++++|+..+| +.++++++++.+ ||++.+|..+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~ 154 (229)
T 2fdr_A 78 LDMRLERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAA 154 (229)
T ss_dssp HHHHHHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHH
T ss_pred HHHHhhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHH
Confidence 222222235788999999988874 89999999999999999999999999 999999888889 999999999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCc-----cccC--CCcEEEcCchhhhHHH
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPV-----YELG--AADLVVRHLDELSVVD 328 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~-----~~~~--~ad~vv~sl~eL~~~~ 328 (368)
++|++|++|++|||+.||++||+.+|+.+|+++++... .++. .||++++++.|+...+
T Consensus 155 ~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 155 QFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred HcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 99999999999999999999999999999999866542 1121 3899999999996544
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-26 Score=204.49 Aligned_cols=202 Identities=17% Similarity=0.196 Sum_probs=150.6
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHh-----------CCCHHHH----HHHHHh---cCC
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE-----------GMKNEQA----ISEVLC---WSR 178 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~-----------g~~~~~~----~~~~l~---~~~ 178 (368)
.+|+|+||+||||+|+.. ....++.++++++|.......+...+. +...... +..+.. ...
T Consensus 5 ~~k~i~fD~DGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (240)
T 3smv_A 5 DFKALTFDCYGTLIDWET-GIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEP 83 (240)
T ss_dssp GCSEEEECCBTTTBCHHH-HHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCC
T ss_pred cceEEEEeCCCcCcCCch-hHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCC
Confidence 479999999999998654 445677888888999887766544433 1122211 111111 111
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCC
Q 043738 179 DPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRG 258 (368)
Q Consensus 179 ~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~ 258 (368)
... ....+.... ....++||+.++|+.|++ |++++++||+....+...++. +..+|+.++++++++..
T Consensus 84 ~~~--------~~~~~~~~~-~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~~ 151 (240)
T 3smv_A 84 DAA--------EREEFGTSV-KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGSY 151 (240)
T ss_dssp CHH--------HHHHHHTGG-GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTSC
T ss_pred CHH--------HHHHHHHHH-hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCCC
Confidence 111 111222222 225889999999999999 799999999998888888877 55789999999999999
Q ss_pred CCCHHHHHHH---HHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCC-------C--ccccCCCcEEEcCchhhh
Q 043738 259 KPDPEMFVYA---AQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKH-------P--VYELGAADLVVRHLDELS 325 (368)
Q Consensus 259 KP~~~~~~~~---le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~-------~--~~~~~~ad~vv~sl~eL~ 325 (368)
||++.+|..+ ++++|++|++|++|||+. ||++||+++|+++++++..+ . ......||++++++.||.
T Consensus 152 KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~ 231 (240)
T 3smv_A 152 KPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMA 231 (240)
T ss_dssp TTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHH
Confidence 9999999999 899999999999999997 99999999999999998541 1 122245999999999997
Q ss_pred HHHHhc
Q 043738 326 VVDLKN 331 (368)
Q Consensus 326 ~~~l~~ 331 (368)
..+.+.
T Consensus 232 ~~l~~~ 237 (240)
T 3smv_A 232 EAHKQA 237 (240)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=201.48 Aligned_cols=207 Identities=14% Similarity=0.154 Sum_probs=153.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCC----HHHHHHHHHHHH-
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD----PAELRRMASRME- 191 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~----~~~~~~l~~~~~- 191 (368)
.+|+|+||+||||+|+... ...++.++++++|...........+.+.. ...+..+...... ..........+.
T Consensus 14 ~~k~i~fDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (254)
T 3umg_A 14 NVRAVLFDTFGTVVDWRTG-IATAVADYAARHQLEVDAVAFADRWRARY-QPSMDAILSGAREFVTLDILHRENLDFVLR 91 (254)
T ss_dssp BCCEEEECCBTTTBCHHHH-HHHHHHHHHHHTTCCCCHHHHHHHHHTTH-HHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCceecCchH-HHHHHHHHHHHhcCCCCHHHHHHHHHHhH-HHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 4899999999999986543 44678888899999887766666655532 2222222211110 000111110000
Q ss_pred --------------HHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC
Q 043738 192 --------------EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR 257 (368)
Q Consensus 192 --------------~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~ 257 (368)
..+.... ....++|++.++|+.|++. ++++++||.....+...++.+|+. |+.++++++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~ 167 (254)
T 3umg_A 92 ESGIDPTNHDSGELDELARAW-HVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINRK 167 (254)
T ss_dssp HTTCCGGGSCHHHHHHHHGGG-GSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHTC
T ss_pred HhCCCcCcCCHHHHHHHHHHH-hhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCCC
Confidence 0111111 2357899999999999997 999999999999999999999986 999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcC----CC-Cccc---cCCCcEEEcCchhhhHHHH
Q 043738 258 GKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVAS----KH-PVYE---LGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~----~~-~~~~---~~~ad~vv~sl~eL~~~~l 329 (368)
.||++.+|..+++++|++|++|++|||+.||++||+.+|+++++++. +. ...+ ...||++++++.||...+.
T Consensus 168 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~ 247 (254)
T 3umg_A 168 YKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLR 247 (254)
T ss_dssp CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999983 22 1222 2459999999999976654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=207.34 Aligned_cols=207 Identities=15% Similarity=0.232 Sum_probs=147.7
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHH----hCCCCCHHHHH----HHHhC-------CCHHHH----HHHHH--
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQE----EGKSPPPAFIL----RRIEG-------MKNEQA----ISEVL-- 174 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~----~g~~~~~~~~~----~~~~g-------~~~~~~----~~~~l-- 174 (368)
.++|+|+|||||||+|+.. ....++.++++. +|......... ....+ ...... +...+
T Consensus 16 ~~~k~viFDlDGTLvds~~-~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLIDTAG-ASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAIQE 94 (260)
T ss_dssp CCCCEEEECCBTTTBCHHH-HHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCCCCCHH-HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHH
Confidence 4689999999999998654 445666666653 45544222111 11222 122211 11111
Q ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeC
Q 043738 175 --CWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAA 252 (368)
Q Consensus 175 --~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~ 252 (368)
............... |.........++||+.++|+.|++ +++++++||++...+...++++|+..+|+.++++
T Consensus 95 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~ 169 (260)
T 2gfh_A 95 TKGGADNRKLAEECYFL----WKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIG 169 (260)
T ss_dssp HHCSSCCHHHHHHHHHH----HHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG
T ss_pred hcCccchHHHHHHHHHH----HHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEec
Confidence 111122222222222 222111235889999999999998 5999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-HhhHHHHHHcCC-eEEEEcCCCCcc--ccCCCcEEEcCchhhhHHH
Q 043738 253 EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS-NQTVEAAHDARM-KCVAVASKHPVY--ELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 253 e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs-~nDl~~A~~aG~-~~I~v~~~~~~~--~~~~ad~vv~sl~eL~~~~ 328 (368)
++++.+||++++|..+++++|++|++|++|||+ .+|+.+|+++|| .+|++.++.... ....++++++++.||...+
T Consensus 170 ~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 170 GEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 249 (260)
T ss_dssp GGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHH
Confidence 999999999999999999999999999999996 899999999999 899998554321 2235999999999996544
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=194.56 Aligned_cols=127 Identities=14% Similarity=0.171 Sum_probs=116.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|++.|++++++||+....+...++.+|+..+|+.++++++.+.+||++.+|..+++++|++|++|++
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILF 177 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEE
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCC-Ccccc-CCCcEEEcCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKH-PVYEL-GAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~-~~ad~vv~sl~eL~~~~ 328 (368)
|||+.+|+.||+.+|+.++++.++. ....+ ..||++++++.||...+
T Consensus 178 vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 178 VSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 9999999999999999999999543 33333 34999999999997654
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=206.83 Aligned_cols=202 Identities=20% Similarity=0.287 Sum_probs=161.2
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+|+|+||+||||+|+... ...++..+++++|. ...........|.........+.........+... ...+..
T Consensus 34 ~ik~iifDlDGTLlds~~~-~~~~~~~~~~~~g~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 107 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPA-IAAFWRDFGKDKPY-FDAEHVIHISHGWRTYDAIAKFAPDFADEEYVNKL----EGEIPE 107 (275)
T ss_dssp EESEEEECCBTTTEECHHH-HHHHHHHHHTTCTT-CCHHHHHHHCTTCCHHHHHHHHCGGGCCHHHHHHH----HHTHHH
T ss_pred cCCEEEECCCCCCCCCHHH-HHHHHHHHHHHcCC-CCHHHHHHHhcCCCHHHHHHHHhccCCcHHHHHHH----HHHHHH
Confidence 3799999999999987644 44667777777773 34445556667887777666665433333333332 333333
Q ss_pred HHCCccccCccHHHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC-
Q 043738 197 LQGGIYRLRTGSKEFVNILMHY-KIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF- 274 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~-Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi- 274 (368)
.......++||+.++|+.|++. |++++++|+.....+...++.+|+. +|+.+++++++..+||++++|..+++++|+
T Consensus 108 ~~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~ 186 (275)
T 2qlt_A 108 KYGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFP 186 (275)
T ss_dssp HHCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCC
T ss_pred HHhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCC
Confidence 3444468899999999999999 9999999999999999999999986 589999999999999999999999999999
Q ss_pred ------CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccC--CCcEEEcCchhhh
Q 043738 275 ------IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELG--AADLVVRHLDELS 325 (368)
Q Consensus 275 ------~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~--~ad~vv~sl~eL~ 325 (368)
+|++|++|||+.||++||+.+|+.++++.+++...++. .||++++++.||.
T Consensus 187 ~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~ 245 (275)
T 2qlt_A 187 INEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIR 245 (275)
T ss_dssp CCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEE
T ss_pred ccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcC
Confidence 99999999999999999999999999999766544332 4899999999985
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-24 Score=192.51 Aligned_cols=126 Identities=13% Similarity=0.188 Sum_probs=115.7
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
...++||+.++|+.|++.|++++++||.....+...++.+|+..+|+.++++++++.+||++.+|..+++++|++|++|+
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 173 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEIL 173 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEE
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc-CCCcEEEcCchhhhH
Q 043738 281 VFGNSNQTVEAAHDARMKCVAVASKHP-VYEL-GAADLVVRHLDELSV 326 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~-~~ad~vv~sl~eL~~ 326 (368)
+|||+.||+.||+.+|+++++++++.. .... ..||++++++.||..
T Consensus 174 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (230)
T 3um9_A 174 FVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLAS 221 (230)
T ss_dssp EEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHH
T ss_pred EEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHH
Confidence 999999999999999999999995543 2222 359999999999954
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.6e-24 Score=191.58 Aligned_cols=127 Identities=18% Similarity=0.217 Sum_probs=116.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|+++|++++++||+....+...++++|+..+|+.++++++++..||++++|..+++++|++|++|++
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 183 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCF 183 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCC-cEEEcCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAA-DLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~a-d~vv~sl~eL~~~~ 328 (368)
|||+.+|+++|+.+|+.++++..+...... ..| +++++++.||...+
T Consensus 184 iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 184 VSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp EESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHH
T ss_pred EeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHH
Confidence 999999999999999999999865543322 237 99999999996544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=192.68 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=143.8
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHH----------HHHhCCCHHHH----HHH---HHhcCCCH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFIL----------RRIEGMKNEQA----ISE---VLCWSRDP 180 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~----------~~~~g~~~~~~----~~~---~l~~~~~~ 180 (368)
+|+|+||+||||+++... ...++..+++.+.......... ....+...... ... ........
T Consensus 8 ik~i~fDlDGTL~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPF-FQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIAA 86 (234)
T ss_dssp CCEEEECCBTTTBCCHHH-HHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCCH
T ss_pred ccEEEEeCCCCCccCcch-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCCH
Confidence 899999999999987653 3344454544433222222221 12334443332 111 11223344
Q ss_pred HHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCC-CcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCC
Q 043738 181 AELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYK-IPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGK 259 (368)
Q Consensus 181 ~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~G-i~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~K 259 (368)
.....+.. .+.........++||+.++|+.|++.| ++++++||+....+...++.+|+..+|+.++++ +|
T Consensus 87 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~-----~k 157 (234)
T 3ddh_A 87 DIIRQIVD----LGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM-----SD 157 (234)
T ss_dssp HHHHHHHH----HHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE-----SC
T ss_pred HHHHHHHH----HHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec-----CC
Confidence 44444433 333444455789999999999999999 999999999999999999999999999999875 58
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC----CCccc-cCC-CcEEEcCchhhhHH
Q 043738 260 PDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASK----HPVYE-LGA-ADLVVRHLDELSVV 327 (368)
Q Consensus 260 P~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~----~~~~~-~~~-ad~vv~sl~eL~~~ 327 (368)
|++++|..+++++|++|++|++|||+. ||++||+.+|+.++++..+ +...+ ... +|++++++.||...
T Consensus 158 pk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 158 KTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred CCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 999999999999999999999999997 9999999999999999532 22222 223 59999999999643
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-24 Score=190.97 Aligned_cols=125 Identities=14% Similarity=0.195 Sum_probs=114.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|++.|++++++||+....+...++++|+..+|+.++++++++.+||++++|..+++++|++|++|++
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 173 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF 173 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCc-ccc-CCCcEEEcCchhhhH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPV-YEL-GAADLVVRHLDELSV 326 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~-~~~-~~ad~vv~sl~eL~~ 326 (368)
|||+.+|+.+|+++|+.++++.++... ... ..||++++++.|+..
T Consensus 174 iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~ 220 (232)
T 1zrn_A 174 VASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVE 220 (232)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHT
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHH
Confidence 999999999999999999999865332 222 348999999999854
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=193.41 Aligned_cols=126 Identities=18% Similarity=0.288 Sum_probs=116.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++|++.++|+.|++. ++++++||.....+...++.+|+..+|+.++++++.+..||++.+|..+++++|++|++|++
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEE
Confidence 57899999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCH-hhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchhhhHHH
Q 043738 282 FGNSN-QTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~-nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~eL~~~~ 328 (368)
|||+. ||++||+.+|+.++++++++...+. ..||++++++.||...+
T Consensus 178 vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 178 VGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp EESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred EcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHH
Confidence 99998 9999999999999999976554433 36999999999996554
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-24 Score=196.59 Aligned_cols=205 Identities=12% Similarity=0.137 Sum_probs=139.3
Q ss_pred cCCCceEEEEeccCccccCcc------hHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHh---cCCCHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNP------DLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLC---WSRDPAELR 184 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~------~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~---~~~~~~~~~ 184 (368)
|.+.+++|+|||||||+|+.. ....+.+..+++.++........+..+.+....+....+.. .........
T Consensus 27 M~~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~ 106 (253)
T 2g80_A 27 MGDNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILK 106 (253)
T ss_dssp --CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHH
T ss_pred CCCCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHH
Confidence 434589999999999998642 12233444555556654333333444445555554443322 111111122
Q ss_pred HH-HHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-----------CccccccEEEeC
Q 043738 185 RM-ASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI-----------GIEEYFTAIVAA 252 (368)
Q Consensus 185 ~l-~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~-----------gl~~~Fd~iv~~ 252 (368)
.+ ...+...|... .....++||+.++|+. |++++|+||++...++..++++ ++..+|+.++.+
T Consensus 107 ~~~~~~~~~~~~~~-~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~ 181 (253)
T 2g80_A 107 QLQGYVWAHGYESG-QIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI 181 (253)
T ss_dssp HHHHHHHHHHHHTT-SCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH
T ss_pred HHHHHHHHHHHHhC-cccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee
Confidence 22 12234444321 2235889999999988 8999999999999999999876 477778777655
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC-CCccccCCCcEEEcCchhh
Q 043738 253 EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK-HPVYELGAADLVVRHLDEL 324 (368)
Q Consensus 253 e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~-~~~~~~~~ad~vv~sl~eL 324 (368)
.+...||+|++|..+++++|++|++|++|||+.+|+.+|+++||.+|++.+. ........++++++++.||
T Consensus 182 -~~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 182 -NTSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp -HHHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred -eccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 3312599999999999999999999999999999999999999999999853 3221112378999999875
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-24 Score=197.45 Aligned_cols=123 Identities=11% Similarity=0.054 Sum_probs=108.7
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc---CccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI---GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~---gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
...++||+.++|+.|+++|++++|+||++...++..++++ |+..+|+.++++ +++ +||++++|..+++++|++|+
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSCGG
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcCcc
Confidence 3688999999999999999999999999998888888854 599999999999 888 99999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCC-Ccccc--CCCcEEEcCchhhh
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYEL--GAADLVVRHLDELS 325 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~--~~ad~vv~sl~eL~ 325 (368)
+|++|||+.+|+.+|+++||.+|++..+. ...+. ..++++++++.||.
T Consensus 206 ~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 206 NILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred cEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 99999999999999999999999997533 22111 23789999999884
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=195.31 Aligned_cols=201 Identities=15% Similarity=0.108 Sum_probs=146.9
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHH---HHhCCCC---CH----HHHHH--HHhCCCHHHHHHHHHh-------cC
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLA---QEEGKSP---PP----AFILR--RIEGMKNEQAISEVLC-------WS 177 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~---~~~g~~~---~~----~~~~~--~~~g~~~~~~~~~~l~-------~~ 177 (368)
.+|+|+|||||||+|+... ...++.+++ .++|... .. ..... ...|.........+.. ..
T Consensus 12 ~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 90 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDY-YRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEAR 90 (251)
T ss_dssp SCCEEEECCBTTTBCCHHH-HHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTC
T ss_pred ceeEEEEeCCCCCccCcHh-HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCC
Confidence 4799999999999986644 445566666 3566654 11 11111 2457766555443321 11
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC
Q 043738 178 RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR 257 (368)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~ 257 (368)
...... ..+.+.+.........++||+.++|+.|+ .|++++++||+....+...++.+|+..+|+.++++
T Consensus 91 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~----- 160 (251)
T 2pke_A 91 IEARDI----QRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV----- 160 (251)
T ss_dssp CCHHHH----HHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE-----
T ss_pred CChHHH----HHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee-----
Confidence 222222 23333444444555688999999999999 89999999999999999999999999999988874
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCcc----c---cCCCcE-EEcCchhhhHHH
Q 043738 258 GKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPVY----E---LGAADL-VVRHLDELSVVD 328 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~~----~---~~~ad~-vv~sl~eL~~~~ 328 (368)
.||++++|..+++++|++|++|++|||+. ||+.||+.+|+.+|++.++.... + ...+++ +++++.||...+
T Consensus 161 ~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 161 SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAV 240 (251)
T ss_dssp SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHH
T ss_pred CCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHH
Confidence 58999999999999999999999999999 99999999999999997554211 1 235898 999999996543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-25 Score=193.35 Aligned_cols=123 Identities=20% Similarity=0.330 Sum_probs=111.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.+ |+.|+++ ++++++||.+...+...++++|+..+|+.++++++++..||++++|..+++++| |++|++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~~ 148 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFL 148 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCEE
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEEE
Confidence 588999999 9999999 999999999999999999999999999999999999999999999999999999 999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCC-cccc-CCCcEEEcCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHP-VYEL-GAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~-~~ad~vv~sl~eL~~~~ 328 (368)
|||+.+|+.+|+++|+.++++.++.. .... ..++++++++.||...+
T Consensus 149 vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 197 (201)
T 2w43_A 149 VSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWI 197 (201)
T ss_dssp EESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHH
T ss_pred EeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHH
Confidence 99999999999999999999986433 2222 34999999999996543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-23 Score=185.66 Aligned_cols=203 Identities=18% Similarity=0.262 Sum_probs=145.0
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHH---HHHhCCCCCH---HH---HHHHHh------CCCHH----HHHHHHH-hcC
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTL---AQEEGKSPPP---AF---ILRRIE------GMKNE----QAISEVL-CWS 177 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~---~~~~g~~~~~---~~---~~~~~~------g~~~~----~~~~~~l-~~~ 177 (368)
+|+|+||+||||+++...+. .+...+ +...+..... .. ....+. ..... ......+ ...
T Consensus 2 ik~i~fDlDGTL~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 2 IKLVTFDLDDTLWDTAPAIV-GAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCEEEECCBTTTBCSHHHHH-HHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred eeEEEecCcccCcCCchHHH-HHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 68999999999998764333 333333 3333332211 11 011100 00111 1112222 223
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC
Q 043738 178 RDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR 257 (368)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~ 257 (368)
........+...+.+.+...... ..++||+.++|+.|++. ++++++||+... ++.+|+..+|+.++++++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~ 153 (230)
T 3vay_A 81 YDSDEAQQLADESFEVFLHGRHQ-VQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGI 153 (230)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTC-CCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTC
T ss_pred CChhhhHHHHHHHHHHHHHhhcc-CccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccCC
Confidence 44445555555555555554443 68999999999999998 999999998755 678899999999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCCc-cccCCCcEEEcCchhhhHHH
Q 043738 258 GKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHPV-YELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~-~~~~~ad~vv~sl~eL~~~~ 328 (368)
+||++.+|..+++++|++|++|++|||+. ||+.||+++|+.++++..+... .....+|++++++.||...+
T Consensus 154 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 154 GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 99999999999999999999999999998 9999999999999999955443 22445999999999996554
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9.2e-24 Score=196.54 Aligned_cols=126 Identities=14% Similarity=0.180 Sum_probs=110.0
Q ss_pred cccCccHHHHHHHHHhCCC--cEEEEcCCChHHHHHHHHHcCccccccEEEeCCCC----CCCCCCHHHHHHHHHHcCCC
Q 043738 202 YRLRTGSKEFVNILMHYKI--PMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDV----HRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi--~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v----~~~KP~~~~~~~~le~lgi~ 275 (368)
..++||+.++|+.|++.|+ +++++||+....+...++.+|+..+|+.++++++. ..+||++++|..+++++|++
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~ 220 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLA 220 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHHHHHHTCC
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHHHHHcCCC
Confidence 5789999999999999999 99999999999999999999999999999988654 56799999999999999999
Q ss_pred C-CcEEEEcCCHhhHHHHHHcCC-eEEEEcCCCCccc---cCCCcEEEcCchhhhHH
Q 043738 276 P-ERCIVFGNSNQTVEAAHDARM-KCVAVASKHPVYE---LGAADLVVRHLDELSVV 327 (368)
Q Consensus 276 p-~~~l~IGDs~nDl~~A~~aG~-~~I~v~~~~~~~~---~~~ad~vv~sl~eL~~~ 327 (368)
| ++|++|||+.||+.||+++|+ .++++..+..... ...||++++++.||...
T Consensus 221 ~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 221 RYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp CGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9 999999999999999999999 5566665543321 23589999999999643
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=182.99 Aligned_cols=177 Identities=15% Similarity=0.180 Sum_probs=137.6
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.+|+|+||+||||+|+.. ....++.++++++|...........+.+........ .+.. .. .....+.+.+..
T Consensus 5 ~~k~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~----~~~~~~~~~~~~ 76 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDNYE-TSTAAFVETLALYGITQDHDSVYQALKVSTPFAIET-FAPN--LE----NFLEKYKENEAR 76 (190)
T ss_dssp CCSEEEECTBTTTBCHHH-HHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHHH-HCTT--CT----THHHHHHHHHHH
T ss_pred cccEEEEeCCCCcCCCHH-HHHHHHHHHHHHhCCCCCHHHHHHHHccccHHHHHH-Hhhh--HH----HHHHHHHHHHHH
Confidence 379999999999998654 445677888889998877665544443333333222 2111 11 112233344444
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
..... .++|++.++|+.|+++|++++++||.. ..+...++++|+..+|+.+++++++..+||++++|..+++++|++
T Consensus 77 ~~~~~-~~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~- 153 (190)
T 2fi1_A 77 ELEHP-ILFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS- 153 (190)
T ss_dssp HTTSC-CBCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS-
T ss_pred hcCcC-ccCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC-
Confidence 44443 489999999999999999999999986 467888999999999999999999999999999999999999998
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
+|++|||+.||++||+.+|+++++++++
T Consensus 154 -~~~~iGD~~~Di~~a~~aG~~~~~~~~~ 181 (190)
T 2fi1_A 154 -SGLVIGDRPIDIEAGQAAGLDTHLFTSI 181 (190)
T ss_dssp -SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred -eEEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence 9999999999999999999999998754
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=195.17 Aligned_cols=197 Identities=15% Similarity=0.216 Sum_probs=135.8
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH---hCCC------------HHHHHHHHHhcCCCHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI---EGMK------------NEQAISEVLCWSRDPA 181 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~---~g~~------------~~~~~~~~l~~~~~~~ 181 (368)
++++|+||+||||+|+...+ ..++.++++++|.......+...+ .|.. ....+.. +.......
T Consensus 2 ~~k~viFDlDGTL~d~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~ 79 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVF-YEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYI-LGIYPSER 79 (220)
T ss_dssp CCCEEEECSBTTTEEEEETT-HHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHH-HTCCCCHH
T ss_pred CceEEEEcCCCceecccccH-HHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHH-cCCCCcHH
Confidence 36899999999999876544 467788888999887765543332 2221 2222222 22212222
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCC
Q 043738 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPD 261 (368)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~ 261 (368)
.... +.+.+. ......++||+.++|+.|+++|++++++||+.. .+...++++|+..+|+.++++++++..||+
T Consensus 80 ~~~~----~~~~~~--~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~ 152 (220)
T 2zg6_A 80 LVKE----LKEADI--RDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAVKPN 152 (220)
T ss_dssp HHHH----HHHTTT--TCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------
T ss_pred HHHH----HHHHhh--cccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCCCCC
Confidence 2111 111110 112358899999999999999999999999966 578899999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHh-hHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQ-TVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~n-Dl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
+++|..+++++|++| ++|||+.+ |+.+|+++||.+|++.++....+. +++++++.||...+
T Consensus 153 ~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~---~~~i~~l~el~~~l 214 (220)
T 2zg6_A 153 PKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV---RDRVKNLREALQKI 214 (220)
T ss_dssp CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC---CSCBSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc---ceEECCHHHHHHHH
Confidence 999999999999998 99999998 999999999999999854332222 67889999996544
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-22 Score=184.79 Aligned_cols=125 Identities=18% Similarity=0.274 Sum_probs=113.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|+ |++++++||+....+...++++|+..+|+.++++++++.+||++++|..+++++|++|++|++
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 169 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 578999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcC-----------------------CCCc-cc-cCCCcEEEcCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVAS-----------------------KHPV-YE-LGAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~-----------------------~~~~-~~-~~~ad~vv~sl~eL~~~~ 328 (368)
|||+.+|++||+++|+.++++++ +... .. ...+|++++++.||...+
T Consensus 170 vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 170 VSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp EESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred EeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 99999999999999999999987 2221 11 234999999999997654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=185.12 Aligned_cols=178 Identities=17% Similarity=0.230 Sum_probs=132.3
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH------hC-CCHHHHHHHHHhcCCCHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI------EG-MKNEQAISEVLCWSRDPAELRRMASR 189 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~------~g-~~~~~~~~~~l~~~~~~~~~~~l~~~ 189 (368)
.+|+|+||+||||+|+.. . ..++..+++++|............ .+ ......+............ ...
T Consensus 3 ~~k~viFDlDGTL~d~~~-~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 76 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-D-REQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFT----PED 76 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-C-HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSC----HHH
T ss_pred CceEEEEeCCCeeECCCc-c-hHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCC----HHH
Confidence 478999999999998653 2 356777888888754322111111 11 1222222222211110000 011
Q ss_pred HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHH
Q 043738 190 MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAA 269 (368)
Q Consensus 190 ~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~l 269 (368)
+.+.+ . ....++||+.++|+.|+++| +++++||.+...+...++++|+..+|+.++++++++..||++++|..++
T Consensus 77 ~~~~~---~-~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~ 151 (200)
T 3cnh_A 77 FRAVM---E-EQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGL 151 (200)
T ss_dssp HHHHH---H-HTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHH
T ss_pred HHHHH---H-hcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHH
Confidence 11211 1 12468999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 270 QLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 270 e~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
+++|++|++|++|||+.+|+++|+++|+.++++.++
T Consensus 152 ~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 152 TLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 999999999999999999999999999999998754
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=185.66 Aligned_cols=180 Identities=14% Similarity=0.211 Sum_probs=129.4
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHH-HHHHHHHHH-----
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAE-LRRMASRME----- 191 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~-~~~l~~~~~----- 191 (368)
+|+|+|||||||+|+..... ...+.++|.... ......+.+......+.. ....... ...+...+.
T Consensus 5 ~k~iiFDlDGTL~d~~~~~~----~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~ 76 (211)
T 2i6x_A 5 IRNIVFDLGGVLIHLNREES----IRRFKAIGVADI-EEMLDPYLQKGLFLDLES---GRKSEEEFRTELSRYIGKELTY 76 (211)
T ss_dssp CSEEEECSBTTTEEECHHHH----HHHHHHTTCTTH-HHHTCC---CCHHHHHHH---SSSCHHHHHHHHHHHHTSCCCH
T ss_pred ceEEEEeCCCeeEecchHHH----HHHHHHhCCchH-HHHHHHHhCchHHHHHHc---CCCCHHHHHHHHHHHhCCCCCH
Confidence 68999999999998765332 455566776542 222222222222221111 0111111 111111111
Q ss_pred -HHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH------cCccccccEEEeCCCCCCCCCCHHH
Q 043738 192 -EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS------IGIEEYFTAIVAAEDVHRGKPDPEM 264 (368)
Q Consensus 192 -~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~------~gl~~~Fd~iv~~e~v~~~KP~~~~ 264 (368)
..+.........++||+.++|+.|++ |++++++||+....+...++. +|+..+|+.++++++++..||++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~ 155 (211)
T 2i6x_A 77 QQVYDALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDI 155 (211)
T ss_dssp HHHHHHHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHH
T ss_pred HHHHHHHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHH
Confidence 11122222224788999999999999 999999999999999888888 8999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
|..+++++|++|++|++|||+.+|+.||+.+|+.+++++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 156 FLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp HHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred HHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHH
Confidence 999999999999999999999999999999999999988654
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9e-23 Score=183.87 Aligned_cols=178 Identities=12% Similarity=0.147 Sum_probs=131.2
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHh----------C-CCHHHHHHHHH---hcCCCHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE----------G-MKNEQAISEVL---CWSRDPA 181 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~----------g-~~~~~~~~~~l---~~~~~~~ 181 (368)
+++++|+||+||||+++.. ..+...++++|...... ....+. | ....+....+. .......
T Consensus 26 ~~ik~viFD~DGTL~d~~~----~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 100 (229)
T 4dcc_A 26 KGIKNLLIDLGGVLINLDR----ERCIENFKKIGFQNIEE-KFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDK 100 (229)
T ss_dssp CCCCEEEECSBTTTBCBCH----HHHHHHHHHHTCTTHHH-HHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCHH
T ss_pred CCCCEEEEeCCCeEEeCCh----HHHHHHHHHhCCCcHHH-HHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCHH
Confidence 3589999999999998663 44556677788763332 223221 1 12222222211 1111111
Q ss_pred HHHHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHH------HHcCccccccEEEeCCCC
Q 043738 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAI------DSIGIEEYFTAIVAAEDV 255 (368)
Q Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l------~~~gl~~~Fd~iv~~e~v 255 (368)
.+ .+.+. .....+.||+.++|+.|++. ++++++||+....+...+ +.+|+..+|+.+++++++
T Consensus 101 ~~-------~~~~~---~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~ 169 (229)
T 4dcc_A 101 QI-------DAAWN---SFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEM 169 (229)
T ss_dssp HH-------HHHHH---TTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHH
T ss_pred HH-------HHHHH---HHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeeccc
Confidence 11 11111 11135679999999999998 999999999999888555 778999999999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVY 309 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~ 309 (368)
+..||++++|+.+++++|++|++|++|||+.+|+++|+++|+.+|+++++....
T Consensus 170 ~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k 223 (229)
T 4dcc_A 170 KMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWS 223 (229)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGG
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999999999999999765543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.89 E-value=6e-23 Score=180.80 Aligned_cols=127 Identities=20% Similarity=0.327 Sum_probs=114.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh---HHHHHHHHHcCccccccEEEeCCCC----CCCCCCHHHHHHHHHHcCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR---KTLETAIDSIGIEEYFTAIVAAEDV----HRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~---~~~~~~l~~~gl~~~Fd~iv~~e~v----~~~KP~~~~~~~~le~lgi 274 (368)
..++||+.++|+.|+++|++++++||+.. ..+...++++|+..+|+.++++++. +..||++++|..+++++|+
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~ 112 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQI 112 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTC
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCC
Confidence 58999999999999999999999999887 8899999999999999999999886 7899999999999999999
Q ss_pred CCCcEEEEcCC-HhhHHHHHHcCCeEEEEcCCCC---ccccC--CCcEEEc--CchhhhHHH
Q 043738 275 IPERCIVFGNS-NQTVEAAHDARMKCVAVASKHP---VYELG--AADLVVR--HLDELSVVD 328 (368)
Q Consensus 275 ~p~~~l~IGDs-~nDl~~A~~aG~~~I~v~~~~~---~~~~~--~ad~vv~--sl~eL~~~~ 328 (368)
+|++|++|||+ .+|+.+|+++||.+|++..+.. ...+. .++++++ ++.+|...+
T Consensus 113 ~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 113 DKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp CGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred CcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 99999999999 6999999999999999985543 12222 5899999 999997654
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-23 Score=183.32 Aligned_cols=122 Identities=20% Similarity=0.275 Sum_probs=104.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC-CcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP-ERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p-~~~l 280 (368)
..++||+.++|+.|+++|++++|+||.....+..++ + .+|+.+++++++..+||+|++|..+++++|+.+ ++|+
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v 109 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCV 109 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCE
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEE
Confidence 578999999999999999999999999877663333 3 468999999999999999999999999999975 8999
Q ss_pred EEcCCHhhHHHHHHcCCeEEEEcCCCCc------------------------cc--cCCCcEEEcCchhhhHHH
Q 043738 281 VFGNSNQTVEAAHDARMKCVAVASKHPV------------------------YE--LGAADLVVRHLDELSVVD 328 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~~I~v~~~~~~------------------------~~--~~~ad~vv~sl~eL~~~~ 328 (368)
+|||+.+|+++|+++||.+|++.++... .. ...++++++++.||...+
T Consensus 110 ~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l 183 (196)
T 2oda_A 110 LISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCL 183 (196)
T ss_dssp EEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred EEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHH
Confidence 9999999999999999999999965431 01 134899999999997644
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.4e-23 Score=178.81 Aligned_cols=127 Identities=18% Similarity=0.172 Sum_probs=109.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCccccccEEEe-----CCCCCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEYFTAIVA-----AEDVHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~Fd~iv~-----~e~v~~~KP~ 261 (368)
..++||+.++|+.|+++|++++++||.+. ..+...++++| .+|+.++. ++++...||+
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~KP~ 103 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCACRKPL 103 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSSSTTS
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCCCCCC
Confidence 57899999999999999999999999986 56677888888 44565552 5777889999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccc-----cCCCcEEEcCchhhhHHHHh
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYE-----LGAADLVVRHLDELSVVDLK 330 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~-----~~~ad~vv~sl~eL~~~~l~ 330 (368)
+++|..+++++|++|++|++|||+.+|+++|+++||.+|++.++..... ...||++++++.||...+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~~ 177 (179)
T 3l8h_A 104 PGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLLQ 177 (179)
T ss_dssp SHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999997654322 24589999999999877654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-23 Score=185.45 Aligned_cols=117 Identities=15% Similarity=0.145 Sum_probs=102.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEe----------CCCCCCCCCCHHHHHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVA----------AEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~----------~e~v~~~KP~~~~~~~~le~ 271 (368)
..++||+.++|+.|++.|++++++||+....++..++.+|+..+|+.+++ +.+...+||++.+|+.++++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~ 153 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRL 153 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999998873 33456789999999999999
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCc
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHL 321 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl 321 (368)
+|++|++|++|||+.+|++||+.+|+++++ +. . ......||+++++.
T Consensus 154 ~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~-~-~~l~~~ad~v~~~~ 200 (217)
T 3m1y_A 154 LNISKTNTLVVGDGANDLSMFKHAHIKIAF-NA-K-EVLKQHATHCINEP 200 (217)
T ss_dssp HTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SC-C-HHHHTTCSEEECSS
T ss_pred cCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-Cc-c-HHHHHhcceeeccc
Confidence 999999999999999999999999999877 32 2 22224599999754
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.3e-23 Score=179.85 Aligned_cols=182 Identities=15% Similarity=0.159 Sum_probs=127.9
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHH-HHHHHHH-----
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAEL-RRMASRM----- 190 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~-~~l~~~~----- 190 (368)
.+++|+||+||||+|+.. ..+...+.+++.... ....+.+.+......+. ......... ..+...+
T Consensus 6 ~~k~viFDlDGTL~d~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~ 77 (206)
T 2b0c_A 6 AKMLYIFDLGNVIVDIDF----NRVLGAWSDLTRIPL-ASLKKSFHMGEAFHQHE---RGEISDEAFAEALCHEMALPLS 77 (206)
T ss_dssp CCCEEEECCBTTTEEEET----HHHHHHHHHHHCCCH-HHHHHHCCCCHHHHHHH---TTCSCHHHHHHHHHHHHTCCCC
T ss_pred cccEEEEcCCCeeecCcH----HHHHHHHHHhcCCCH-HHHHHHHhcccHHHHHh---cCCCCHHHHHHHHHHHhCCCCC
Confidence 478999999999998652 222334445554432 33334433322111111 111111111 1111111
Q ss_pred -HHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cCccccccEEEeCCCCCCCCCCHHHHHHH
Q 043738 191 -EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS-IGIEEYFTAIVAAEDVHRGKPDPEMFVYA 268 (368)
Q Consensus 191 -~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~ 268 (368)
.+...........++||+.++|+.|++.|++++++||++...+...+.+ +|+..+|+.++++++++..||++++|..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~ 157 (206)
T 2b0c_A 78 YEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHV 157 (206)
T ss_dssp HHHHHHHHHTCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCCCCCHHHHHHH
Confidence 1112222222357899999999999999999999999987777666666 78889999999999989999999999999
Q ss_pred HHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 269 AQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 269 le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
++++|+++++|++|||+.+|+.+|+++|+.+++++++.
T Consensus 158 ~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 158 LQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp HHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 99999999999999999999999999999999988654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-23 Score=185.04 Aligned_cols=191 Identities=17% Similarity=0.205 Sum_probs=130.5
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCC--CHHHHHHHHHhc-CCCHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGM--KNEQAISEVLCW-SRDPAELRRMASRMEEI 193 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~--~~~~~~~~~l~~-~~~~~~~~~l~~~~~~~ 193 (368)
++++|+|||||||+|+. .+..+++.+|.............+. ...+.+...+.. .... ..+.+.
T Consensus 13 ~~k~viFD~DGTLvd~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 79 (225)
T 1nnl_A 13 SADAVCFDVDSTVIREE------GIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSR-------EQVQRL 79 (225)
T ss_dssp HCSEEEEETBTTTBSSC------HHHHHHHHTTCTTTC------------CHHHHHHHHHHHHCCCH-------HHHHHH
T ss_pred hCCEEEEeCcccccccc------cHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcCCH-------HHHHHH
Confidence 47899999999999865 3456778888764333323333332 223322221110 0111 111122
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc--ccccEEE--------eCCCCCC----CC
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE--EYFTAIV--------AAEDVHR----GK 259 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~--~~Fd~iv--------~~e~v~~----~K 259 (368)
+.. ....++||+.++|+.|+++|++++++||+....++..++++|+. .+|+.++ ++.+... .+
T Consensus 80 ~~~---~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (225)
T 1nnl_A 80 IAE---QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESG 156 (225)
T ss_dssp HHH---SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTT
T ss_pred HHh---ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCC
Confidence 211 23578999999999999999999999999999999999999997 4787653 3333322 36
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccc-cCCCcEEEcCchhhhH
Q 043738 260 PDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYE-LGAADLVVRHLDELSV 326 (368)
Q Consensus 260 P~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~-~~~ad~vv~sl~eL~~ 326 (368)
|||++|..+++++|+ ++|++|||+.+|+.+|+++|+ +|++........ ...++++++++.|+..
T Consensus 157 ~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 157 GKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp HHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred chHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 788999999999998 789999999999999999999 888764332221 2248999999999854
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.5e-23 Score=184.78 Aligned_cols=198 Identities=14% Similarity=0.098 Sum_probs=135.8
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHH-----HHHHHHhCCC-HHHHHHHHHhcCCCHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPA-----FILRRIEGMK-NEQAISEVLCWSRDPAELRRMASR 189 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~-----~~~~~~~g~~-~~~~~~~~l~~~~~~~~~~~l~~~ 189 (368)
..+|+|+|||||||+|+. .....++.++++++|...... ..+....|.. ....+..+...... ......
T Consensus 9 ~~~k~viFDlDGTL~ds~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~ 83 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDND-HVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPR----DTRLLL 83 (231)
T ss_dssp CCSEEEEECCBTTTBCHH-HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTT----CTGGGG
T ss_pred CCCeEEEEcCCCCCEecH-HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhcccc----chHHHH
Confidence 357899999999999865 455577888888888653221 1112223332 12222221110000 001111
Q ss_pred HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHH
Q 043738 190 MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAA 269 (368)
Q Consensus 190 ~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~l 269 (368)
+.+.+... .....++||+.++|+.|+++| +++|+||++...+...++++|+..+|+.++.. . ++|+..+..++
T Consensus 84 ~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~---~--~~K~~~~~~~~ 156 (231)
T 2p11_A 84 MSSFLIDY-PFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLI---Y--IHKELMLDQVM 156 (231)
T ss_dssp GHHHHHHC-CGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE---E--SSGGGCHHHHH
T ss_pred HHHHHHHH-HHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe---c--CChHHHHHHHH
Confidence 23333332 223688999999999999999 99999999999999999999999999876542 2 33356777666
Q ss_pred HHcCCCCCcEEEEcCCHh---hHHHHHHcCCeEEEEcCCC---Ccccc--C-CCcEEEcCchhhhHH
Q 043738 270 QLLKFIPERCIVFGNSNQ---TVEAAHDARMKCVAVASKH---PVYEL--G-AADLVVRHLDELSVV 327 (368)
Q Consensus 270 e~lgi~p~~~l~IGDs~n---Dl~~A~~aG~~~I~v~~~~---~~~~~--~-~ad~vv~sl~eL~~~ 327 (368)
+ +++|++|++|||+.+ |+.+|+++||.+|++.++. ....+ . .++++++++.||...
T Consensus 157 ~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~ 221 (231)
T 2p11_A 157 E--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEM 221 (231)
T ss_dssp H--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGC
T ss_pred h--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHH
Confidence 6 789999999999999 9999999999999998653 21122 1 389999999998543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=174.91 Aligned_cols=125 Identities=18% Similarity=0.277 Sum_probs=108.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC---------------hHHHHHHHHHcCccccccEEEe------------CCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP---------------RKTLETAIDSIGIEEYFTAIVA------------AED 254 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~---------------~~~~~~~l~~~gl~~~Fd~iv~------------~e~ 254 (368)
..++||+.++|+.|+++|++++++||.. ...+...++.+|+. |+.++. +++
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~~~ 126 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFRQV 126 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGBSC
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccCcc
Confidence 5789999999999999999999999998 47788899999987 777663 245
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeE-EEEcCCCCcccc--CCCcEEEcCchhhhHHH
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPVYEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~-I~v~~~~~~~~~--~~ad~vv~sl~eL~~~~ 328 (368)
...+||++++|..+++++|++|++|++|||+.+|+.+|+++|+.+ |++.++....+. ..+|++++++.||...+
T Consensus 127 ~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 127 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred CcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 678999999999999999999999999999999999999999999 999866433222 23899999999997654
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.5e-21 Score=192.93 Aligned_cols=182 Identities=12% Similarity=0.173 Sum_probs=126.1
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHH--------
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASR-------- 189 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~-------- 189 (368)
+|+|+||+||||++... ..++..+...++....... ..+........+...................
T Consensus 3 ~k~viFD~DGTL~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (555)
T 3i28_A 3 LRAAVFDLDGVLALPAV---FGVLGRTEEALALPRGLLN--DAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSET 77 (555)
T ss_dssp -CEEEECTBTTTEESCT---HHHHHHHHHHTTCCTTHHH--HHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCeeecchh---HHHHHHHHHHhCCcHHHHH--HHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhc
Confidence 78999999999997542 3456666677776544322 1221111111222222222222222211111
Q ss_pred ----------HHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCC--ChHHHHHHHHHc--CccccccEEEeCCCC
Q 043738 190 ----------MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTH--PRKTLETAIDSI--GIEEYFTAIVAAEDV 255 (368)
Q Consensus 190 ----------~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~--~~~~~~~~l~~~--gl~~~Fd~iv~~e~v 255 (368)
+.+.+...... ..++||+.++|+.|+++|++++|+||+ ........+... |+..+|+.+++++++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~ 156 (555)
T 3i28_A 78 AKVCLPKNFSIKEIFDKAISA-RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQV 156 (555)
T ss_dssp TTCCCCTTCCHHHHHHHHHHH-CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHH
T ss_pred cCCCCCccccHHHHHHHhHhh-cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEecccc
Confidence 22233332222 589999999999999999999999998 222233333333 788899999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
+..||++++|..+++++|++|++|++|||+.+|+.+|+++||.+|+++.+
T Consensus 157 ~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~ 206 (555)
T 3i28_A 157 GMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 206 (555)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred CCCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999999999999999999999999999999999998754
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-23 Score=187.17 Aligned_cols=203 Identities=13% Similarity=0.142 Sum_probs=137.7
Q ss_pred ceEEEEeccCccccCcchHHHH-HHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCC--CHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQ-AWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR--DPAELRRMASRMEEIY 194 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~-a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--~~~~~~~l~~~~~~~~ 194 (368)
+|+|+|||||||+++...+... .+...+++.|+..... ....|.........+..... ....+....... ..+
T Consensus 3 ~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~---t~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~ 78 (250)
T 2c4n_A 3 IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLL---TNYPSQTGQDLANRFATAGVDVPDSVFYTSAMAT-ADF 78 (250)
T ss_dssp CCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEE---ESCCSCCHHHHHHHHHHTTCCCCGGGEEEHHHHH-HHH
T ss_pred ccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEE---ECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHH-HHH
Confidence 7899999999999976544322 1334456777754311 11124445554444432211 111110000001 112
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEE---------------------------------EEcCCChHHHHHHHHHcC
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMA---------------------------------LVSTHPRKTLETAIDSIG 241 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~va---------------------------------ivSn~~~~~~~~~l~~~g 241 (368)
.........+.+|+.++++.+++.|++++ ++|+.. ......+..+|
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~~~ 157 (250)
T 2c4n_A 79 LRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPACG 157 (250)
T ss_dssp HHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBCHH
T ss_pred HHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeecch
Confidence 22233345778999999999999999998 888876 33333334444
Q ss_pred -ccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-HhhHHHHHHcCCeEEEEcCCCCc-ccc----CCC
Q 043738 242 -IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS-NQTVEAAHDARMKCVAVASKHPV-YEL----GAA 314 (368)
Q Consensus 242 -l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs-~nDl~~A~~aG~~~I~v~~~~~~-~~~----~~a 314 (368)
+..+|+.+++.+.+..+||++.+|..+++++|+++++|++|||+ .||++||+.+|+++++|.++... .++ ..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~ 237 (250)
T 2c4n_A 158 ALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRP 237 (250)
T ss_dssp HHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCC
T ss_pred HHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCC
Confidence 55567777777778889999999999999999999999999999 69999999999999999966543 333 359
Q ss_pred cEEEcCchhhh
Q 043738 315 DLVVRHLDELS 325 (368)
Q Consensus 315 d~vv~sl~eL~ 325 (368)
|++++++.||.
T Consensus 238 ~~v~~~~~el~ 248 (250)
T 2c4n_A 238 SWIYPSVAEID 248 (250)
T ss_dssp SEEESSGGGCC
T ss_pred CEEECCHHHhh
Confidence 99999999874
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-22 Score=188.82 Aligned_cols=192 Identities=12% Similarity=0.076 Sum_probs=133.2
Q ss_pred CCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHh-C-CCHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 043738 115 GCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE-G-MKNEQAISEVLCWSRDPAELRRMASRMEE 192 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~-g-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~ 192 (368)
.+.+++|+|||||||+++.. +..++..+|.......+..... | ....+.+...+.... ....+
T Consensus 105 ~~~~kaviFDlDGTLid~~~------~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~---------~~~~~ 169 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEG------VDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLK---------GTPKA 169 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCH------HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTT---------TCBHH
T ss_pred CCCCCEEEEcCCCCccCCcc------HHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhc---------CCCHH
Confidence 34579999999999998652 3556666665433333222221 2 122222222221110 00111
Q ss_pred HHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEe----------CCCCCCCCCCH
Q 043738 193 IYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVA----------AEDVHRGKPDP 262 (368)
Q Consensus 193 ~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~----------~e~v~~~KP~~ 262 (368)
.+..... ...++||+.++|+.|+++|++++++||+....++..++++|+..+|+.++. ...+..+||++
T Consensus 170 ~i~~~~~-~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp 248 (317)
T 4eze_A 170 VLNAVCD-RMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKK 248 (317)
T ss_dssp HHHHHHH-TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHH
T ss_pred HHHHHHh-CCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCH
Confidence 1122222 258999999999999999999999999999999999999999999987764 23345679999
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc--Cchhhh
Q 043738 263 EMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR--HLDELS 325 (368)
Q Consensus 263 ~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~--sl~eL~ 325 (368)
++|..+++++|++|++|++|||+.+|+.||+.+|+.+++ + .. ......++.++. ++.++.
T Consensus 249 ~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~-~~-~~~~~~a~~~i~~~~L~~ll 310 (317)
T 4eze_A 249 QTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-K-AK-PVVREKIHHQINYHGFELLL 310 (317)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S-CC-HHHHHHCCEEESSSCGGGGG
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-C-CC-HHHHHhcCeeeCCCCHHHHH
Confidence 999999999999999999999999999999999998777 3 22 111223666653 666654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-21 Score=168.92 Aligned_cols=185 Identities=13% Similarity=0.119 Sum_probs=130.6
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCC------CHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSP------PPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRME 191 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~------~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 191 (368)
+++|+|||||||++ .++..+++.+|... .... +..+.+. ....+.........
T Consensus 2 ~k~viFD~DGTL~d-------~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~--------- 60 (206)
T 1rku_A 2 MEIACLDLEGVLVP-------EIWIAFAEKTGIDALKATTRDIPD-YDVLMKQ----RLRILDEHGLKLGD--------- 60 (206)
T ss_dssp CEEEEEESBTTTBC-------CHHHHHHHHHTCGGGGCCTTTCCC-HHHHHHH----HHHHHHHTTCCHHH---------
T ss_pred CcEEEEccCCcchh-------hHHHHHHHHcCChHHHHHhcCcCC-HHHHHHH----HHHHHHHCCCCHHH---------
Confidence 68999999999998 36778888888753 1101 1111111 11111111111111
Q ss_pred HHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCC---CCCCHHHHHH
Q 043738 192 EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHR---GKPDPEMFVY 267 (368)
Q Consensus 192 ~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~---~KP~~~~~~~ 267 (368)
+.+.. ....++||+.++|+.|+++ ++++++||+....++..++++|+..+| +.++++++... .+|+|..+..
T Consensus 61 --~~~~~-~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~ 136 (206)
T 1rku_A 61 --IQEVI-ATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQ 136 (206)
T ss_dssp --HHHHH-TTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHH
T ss_pred --HHHHH-HhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHH
Confidence 11122 2468899999999999999 999999999999999999999999999 57777665431 1488899999
Q ss_pred HHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEE-EcCchhhhHHHH
Q 043738 268 AAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLV-VRHLDELSVVDL 329 (368)
Q Consensus 268 ~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~v-v~sl~eL~~~~l 329 (368)
++++++..|++|++|||+.+|+.+|+.+|+.+++ +. ........++++ ++++.++...+.
T Consensus 137 ~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 137 SVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HA-PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SC-CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-CC-cHHHHHHHhhhccccchHHHHHHHH
Confidence 9999999999999999999999999999998764 32 111111235664 899999976543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-21 Score=178.18 Aligned_cols=192 Identities=14% Similarity=0.103 Sum_probs=131.0
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHH-HHhC-CCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILR-RIEG-MKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~-~~~g-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
..+++|+|||||||+++.. +..+++.++. .....+.. ...+ .+..+.+..++.... ......+. ++
T Consensus 4 ~~~k~viFD~DGTL~d~ds------~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~----~~ 71 (236)
T 2fea_A 4 TRKPFIICDFDGTITMNDN------IINIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLP-SSLKEEIT----SF 71 (236)
T ss_dssp CCCEEEEECCTTTTBSSCH------HHHHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSB-GGGHHHHH----HH
T ss_pred CCCcEEEEeCCCCCCccch------HHHHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcC-CChHHHHH----HH
Confidence 3468999999999996532 1233333432 11222222 2223 445555555543221 11122221 11
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCC--------CCCCHHH-
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHR--------GKPDPEM- 264 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~--------~KP~~~~- 264 (368)
+ .....++||+.++|+.|+++|++++|+||+....++..++ |+..+ +.+++++.... .||++..
T Consensus 72 ~----~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~ 144 (236)
T 2fea_A 72 V----LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTC 144 (236)
T ss_dssp H----HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTC
T ss_pred H----hcCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCcccc
Confidence 1 1125899999999999999999999999999888888888 77665 88888876543 7888884
Q ss_pred HH-------HHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc--C-CCcEEEcCchhhhHHHH
Q 043738 265 FV-------YAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL--G-AADLVVRHLDELSVVDL 329 (368)
Q Consensus 265 ~~-------~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~--~-~ad~vv~sl~eL~~~~l 329 (368)
+. .++++++++|++|++|||+.+|+.+|+++|+.++. ++. .... . .++++++++.+|...+.
T Consensus 145 ~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~-~~~~~~~~~~~~~~~~~~el~~~l~ 216 (236)
T 2fea_A 145 SNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYL-LNECREQNLNHLPYQDFYEIRKEIE 216 (236)
T ss_dssp CSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHH-HHHHHHTTCCEECCSSHHHHHHHHH
T ss_pred ccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hHH-HHHHHHCCCCeeecCCHHHHHHHHH
Confidence 54 89999999999999999999999999999998863 211 1111 2 38899999999976543
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-20 Score=164.24 Aligned_cols=191 Identities=16% Similarity=0.194 Sum_probs=126.1
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHH-HhC-CCHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRR-IEG-MKNEQAISEVLCWSRDPAELRRMASRMEEI 193 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~-~~g-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~ 193 (368)
..+|+|+|||||||+|+. .+..+.+.+|..........+ ..+ ....+.+....... ... ....
T Consensus 3 ~~~k~i~fDlDGTL~d~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~ 67 (211)
T 1l7m_A 3 KKKKLILFDFDSTLVNNE------TIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLL-KDL--------PIEK 67 (211)
T ss_dssp CCCEEEEEECCCCCBSSC------HHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT-TTC--------BHHH
T ss_pred cCCcEEEEeCCCCCCCcc------HHHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHh-cCC--------CHHH
Confidence 357999999999999874 235566666653222222211 222 12222111111000 000 0011
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC----------CCCCCCCHH
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED----------VHRGKPDPE 263 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~----------v~~~KP~~~ 263 (368)
+...... ..+.|++.++|+.++++|++++++|+.....+...++.+|+..+|+.++...+ ...+++++.
T Consensus 68 ~~~~~~~-~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 146 (211)
T 1l7m_A 68 VEKAIKR-ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGE 146 (211)
T ss_dssp HHHHHHT-CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHH
T ss_pred HHHHHHh-CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHH
Confidence 1111222 46789999999999999999999999988888888889998877765432211 123567789
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC--chhhh
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH--LDELS 325 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s--l~eL~ 325 (368)
.+..+++++|+++++|++|||+.||++||+.+|+.+++ . .. ......|++++.+ +.+|.
T Consensus 147 ~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~-~-~~-~~~~~~a~~v~~~~~~~~l~ 207 (211)
T 1l7m_A 147 ILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-C-AK-PILKEKADICIEKRDLREIL 207 (211)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEE-S-CC-HHHHTTCSEEECSSCGGGGG
T ss_pred HHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEE-C-CC-HHHHhhcceeecchhHHHHH
Confidence 99999999999999999999999999999999997543 3 22 2222359999988 88874
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.8e-20 Score=182.56 Aligned_cols=189 Identities=12% Similarity=0.097 Sum_probs=132.7
Q ss_pred CCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHhcC--CCHHHHHHHHHHH
Q 043738 115 GCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG--MKNEQAISEVLCWS--RDPAELRRMASRM 190 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~~~--~~~~~~~~l~~~~ 190 (368)
.+++++|+|||||||+++. .+..+++..|.......+...... ....+.+...+... .....
T Consensus 182 ~~~~k~viFD~DgTLi~~~------~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~-------- 247 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGE------VIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATV-------- 247 (415)
T ss_dssp TTCCCEEEECTBTTTBSSC------HHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHH--------
T ss_pred ccCCcEEEEcCcccCcCCc------hHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHH--------
Confidence 4568999999999999865 346666667664333333322221 12233333222111 11111
Q ss_pred HHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEE-------eC---CCCCCCCC
Q 043738 191 EEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIV-------AA---EDVHRGKP 260 (368)
Q Consensus 191 ~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv-------~~---e~v~~~KP 260 (368)
+.... ....++||+.++|+.|+++|++++++||++...++..++++|+..+|+..+ ++ .++..+||
T Consensus 248 ---~~~~~-~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kp 323 (415)
T 3p96_A 248 ---IDEVA-GQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAG 323 (415)
T ss_dssp ---HHHHH-HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHH
T ss_pred ---HHHHH-HhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcc
Confidence 11111 125899999999999999999999999999999999999999988876432 22 35566899
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc--Cchhh
Q 043738 261 DPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR--HLDEL 324 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~--sl~eL 324 (368)
++++|..+++++|++|++|++|||+.||+.||+.+|+.+++ + .. ......|++++. ++.++
T Consensus 324 k~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~-~~-~~~~~~ad~~i~~~~l~~l 386 (415)
T 3p96_A 324 KATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-N-AK-PALREVADASLSHPYLDTV 386 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S-CC-HHHHHHCSEEECSSCTTHH
T ss_pred hHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-C-CC-HHHHHhCCEEEccCCHHHH
Confidence 99999999999999999999999999999999999998877 3 22 122234888875 44444
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.8e-22 Score=180.89 Aligned_cols=126 Identities=15% Similarity=0.185 Sum_probs=105.8
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc---EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT---AIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd---~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+++++.++++.++ .|+++ ++||.........+..+++..+|+ .+++++++..+||++.+|..+++++|++|++|+
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~ 200 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAV 200 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEE
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEE
Confidence 6789999999999 89999 999987666555566778888887 567778888899999999999999999999999
Q ss_pred EEcCCH-hhHHHHHHcCCeEEEEcCCC-Cccc----cCCCcEEEcCchhhhHHHHhc
Q 043738 281 VFGNSN-QTVEAAHDARMKCVAVASKH-PVYE----LGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 281 ~IGDs~-nDl~~A~~aG~~~I~v~~~~-~~~~----~~~ad~vv~sl~eL~~~~l~~ 331 (368)
+|||+. ||+.||+++|+.+|++.++. ...+ ...+|++++++.++...+.+.
T Consensus 201 ~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~ 257 (259)
T 2ho4_A 201 MIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQH 257 (259)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHHh
Confidence 999999 99999999999999998653 2222 234999999999997766544
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.2e-20 Score=164.43 Aligned_cols=177 Identities=15% Similarity=0.085 Sum_probs=118.4
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHH--------HHHhCC-CHHHHHHHHHh--cCCCHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFIL--------RRIEGM-KNEQAISEVLC--WSRDPAELRR 185 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~--------~~~~g~-~~~~~~~~~l~--~~~~~~~~~~ 185 (368)
.+++|+|||||||+|+... ..+...+...+.......+. ....|. ........... .......+..
T Consensus 3 ~~k~viFDlDGTL~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (232)
T 3fvv_A 3 TRRLALFDLDHTLLPLDSD---YQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAA 79 (232)
T ss_dssp CCEEEEECCBTTTBSSCHH---HHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCcEEEEeCCCCCcCCchH---HHHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhcCCCHHHHHH
Confidence 4689999999999987642 24555555555431111110 111121 22222221111 1122222222
Q ss_pred HHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeC-------C---CC
Q 043738 186 MASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAA-------E---DV 255 (368)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~-------e---~v 255 (368)
...+.+...+. ..++||+.++|+.|+++|++++|+|++....++..++++|+..+|...+.. . ..
T Consensus 80 ---~~~~~~~~~~~--~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 154 (232)
T 3fvv_A 80 ---WHEEFMRDVIR--PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTP 154 (232)
T ss_dssp ---HHHHHHHHTTG--GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSC
T ss_pred ---HHHHHHHHhhh--hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCC
Confidence 22333333222 267999999999999999999999999999999999999998776543221 1 23
Q ss_pred CCCCCCHHHHHHHHHHcC---CCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 256 HRGKPDPEMFVYAAQLLK---FIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lg---i~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
..+++++..+..+++++| ++|++|++|||+.+|+.|++.+|+.+++
T Consensus 155 ~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 155 SFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAA 203 (232)
T ss_dssp SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred CcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence 346778899999999999 9999999999999999999999998766
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-20 Score=154.05 Aligned_cols=101 Identities=14% Similarity=0.196 Sum_probs=94.7
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 043738 205 RTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN 284 (368)
Q Consensus 205 ~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD 284 (368)
+||+.++|+.|+++|++++++||++...+...++.+|+..+|+.++++++....||++++|..+++++|++|++|++|||
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD 99 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDD 99 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcC
Confidence 35677899999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred CHhhHHHHHHcCCeEEEEcCC
Q 043738 285 SNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 285 s~nDl~~A~~aG~~~I~v~~~ 305 (368)
+.+|+.+|+++|+.+|++..+
T Consensus 100 ~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 100 SILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp CHHHHHHHHHHTCEEEECSCH
T ss_pred CHHHHHHHHHCCCEEEEeCCh
Confidence 999999999999999998754
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.6e-20 Score=161.97 Aligned_cols=126 Identities=14% Similarity=0.156 Sum_probs=96.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc--ccccE-EEe-CCC----CCCCCCCHHHHHH-HHHHc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE--EYFTA-IVA-AED----VHRGKPDPEMFVY-AAQLL 272 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~--~~Fd~-iv~-~e~----v~~~KP~~~~~~~-~le~l 272 (368)
..++||+.++|+.|+++|++++++||+....++..++++|+. .+|.. ++. .+. +...+|++..+.. +.+.+
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAK 160 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHG
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHh
Confidence 358899999999999999999999999999999999999984 45643 222 332 2456666655544 44566
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcC--CCCcccc-CCCcEEEcCchhhhHHH
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVAS--KHPVYEL-GAADLVVRHLDELSVVD 328 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~--~~~~~~~-~~ad~vv~sl~eL~~~~ 328 (368)
|+++++|++|||+.||++|+ ++|+.++++.. +...... ..||++++++.||...+
T Consensus 161 ~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 161 GLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp GGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred CCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 99999999999999999998 68998777762 2222222 24999999999997654
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-21 Score=178.55 Aligned_cols=122 Identities=13% Similarity=0.109 Sum_probs=99.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHH--HHH-HHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKT--LET-AIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~--~~~-~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
..++|++.++|+.|+ .|+++ ++||..... ... ..+..++..+|+.++++++...+||++.+|..+++++|++|++
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 202 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQ 202 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGG
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHHH
Confidence 357899999999997 88887 889986632 111 2233446678888888888889999999999999999999999
Q ss_pred EEEEcCC-HhhHHHHHHcCCeEEEEcCCCCc-cccC----CCcEEEcCchhhh
Q 043738 279 CIVFGNS-NQTVEAAHDARMKCVAVASKHPV-YELG----AADLVVRHLDELS 325 (368)
Q Consensus 279 ~l~IGDs-~nDl~~A~~aG~~~I~v~~~~~~-~~~~----~ad~vv~sl~eL~ 325 (368)
|++|||+ .+|+.+|+++|+.+|+|.++... .++. .||++++++.|+.
T Consensus 203 ~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 203 VIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred EEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 9999999 59999999999999999965432 2332 5999999999985
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-19 Score=157.90 Aligned_cols=185 Identities=16% Similarity=0.143 Sum_probs=121.0
Q ss_pred ceEEE-EeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH-hCC-CHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 118 WLGAI-FEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI-EGM-KNEQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 118 ik~VI-FDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~-~g~-~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
++.++ ||+||||+|+. +|..+.+.+|.. ......... .+. ...+........ +.....+.+
T Consensus 8 mk~ivifDlDGTL~d~~------~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 71 (201)
T 4ap9_A 8 MKKVAVIDIEGTLTDFE------FWREMARITGKR-EIEELLEKGLSGEVEWLDSLLKRVGL---------IRGIDEGTF 71 (201)
T ss_dssp GSCEEEEECBTTTBCCC------HHHHHHHHHCCH-HHHHHHHHHHHTSSCHHHHHHHHHHH---------TTTCBHHHH
T ss_pred cceeEEecccCCCcchH------HHHHHHHHhChH-HHHHHHHHHhcCCCCHHHHHHHHHHH---------hcCCCHHHH
Confidence 34555 99999999865 677777777771 111111111 111 111111111100 000001122
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCC-CCCCCHHHHHHHHHHcC
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVH-RGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~-~~KP~~~~~~~~le~lg 273 (368)
.... ....+.||+.++|+.|+++|++++++||+....+... +.+|+..+++.+...++.. ..+|.+.....+++++
T Consensus 72 ~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l- 148 (201)
T 4ap9_A 72 LRTR-EKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF- 148 (201)
T ss_dssp HHGG-GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG-
T ss_pred HHHH-HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc-
Confidence 2222 3358899999999999999999999999988888888 9999988876666544321 1344444456666666
Q ss_pred CCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHH
Q 043738 274 FIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 274 i~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
++++|++|||+.||++||+.+|++++ +..... .||++++++.|+...+
T Consensus 149 -~~~~~i~iGD~~~Di~~~~~ag~~v~-~~~~~~-----~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 149 -RDGFILAMGDGYADAKMFERADMGIA-VGREIP-----GADLLVKDLKELVDFI 196 (201)
T ss_dssp -TTSCEEEEECTTCCHHHHHHCSEEEE-ESSCCT-----TCSEEESSHHHHHHHH
T ss_pred -CcCcEEEEeCCHHHHHHHHhCCceEE-ECCCCc-----cccEEEccHHHHHHHH
Confidence 89999999999999999999999844 443332 6999999999985443
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-20 Score=177.45 Aligned_cols=196 Identities=12% Similarity=0.062 Sum_probs=132.9
Q ss_pred cCCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 043738 114 MGCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG--MKNEQAISEVLCWSRDPAELRRMASRME 191 (368)
Q Consensus 114 ~~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 191 (368)
.....++|+||+||||++. ..+..+++..|.......+...... ....+.....+... .....
T Consensus 103 ~i~~~~~viFD~DgTLi~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~ 167 (335)
T 3n28_A 103 DLTKPGLIVLDMDSTAIQI------ECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKL---------KDAPE 167 (335)
T ss_dssp CTTSCCEEEECSSCHHHHH------HHHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT---------TTCBT
T ss_pred cccCCCEEEEcCCCCCcCh------HHHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHh---------cCCCH
Confidence 3445689999999999972 3566666666654333222222211 12222222111110 00001
Q ss_pred HHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEE-------e---CCCCCCCCCC
Q 043738 192 EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIV-------A---AEDVHRGKPD 261 (368)
Q Consensus 192 ~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv-------~---~e~v~~~KP~ 261 (368)
+.+.... ...+++||+.++|+.|++.|++++++||+....++..++++|+..+|+..+ + .+++..+||+
T Consensus 168 ~~~~~~~-~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk 246 (335)
T 3n28_A 168 QILSQVR-ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTK 246 (335)
T ss_dssp THHHHHH-TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHH
T ss_pred HHHHHHH-HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhh
Confidence 1112222 236889999999999999999999999999999999999999988887543 1 2356678999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
+++|..+++++|+++++|++|||+.||+.||+.+|+++++ ++. ......|++++ .++.++...+
T Consensus 247 ~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~--~~~~~~a~~v~~~~~l~~v~~~L 312 (335)
T 3n28_A 247 ADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAK--PKVEAKAQTAVRFAGLGGVVCIL 312 (335)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCC--HHHHTTSSEEESSSCTHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCC--HHHHhhCCEEEecCCHHHHHHHH
Confidence 9999999999999999999999999999999999998887 322 22223478777 3444444333
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-19 Score=155.50 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=93.3
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCC-hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHP-RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~-~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
...++||+.++|+.|+++|++++++||++ ...+...++.+|+..+|+.++... +|++..|..+++++|++|++|
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~k~~~~~~~~~~~~~~~~~~ 140 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP-----GSKITHFERLQQKTGIPFSQM 140 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS-----SCHHHHHHHHHHHHCCCGGGE
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe-----CchHHHHHHHHHHcCCChHHE
Confidence 35789999999999999999999999998 689999999999999999876542 577899999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
++|||+.+|+.+|+++|+.+|++.++..
T Consensus 141 ~~igD~~~Di~~a~~aG~~~i~v~~g~~ 168 (187)
T 2wm8_A 141 IFFDDERRNIVDVSKLGVTCIHIQNGMN 168 (187)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECSSSCC
T ss_pred EEEeCCccChHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999987654
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.1e-19 Score=160.39 Aligned_cols=125 Identities=18% Similarity=0.178 Sum_probs=106.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCccccccEEE-eC-----------CC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEYFTAIV-AA-----------ED 254 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~Fd~iv-~~-----------e~ 254 (368)
..++||+.++|+.|+++|++++++||... ..+...++++|+. |+.++ +. ++
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~~g~~~~~~~~ 132 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPD 132 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSS
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCCCCceeecccC
Confidence 47889999999999999999999999987 6788889999975 66544 43 56
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeE-EEEcCCCCcccc--CCCcEEEcCchhhhHHH
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPVYEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~-I~v~~~~~~~~~--~~ad~vv~sl~eL~~~~ 328 (368)
+..+||++.+|..+++++|++|++|++|||+.+|+.+|+++|+.+ |++.++....+. ..++++++++.+|...+
T Consensus 133 ~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 133 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 788999999999999999999999999999999999999999999 999866543221 24888999999986544
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-19 Score=175.57 Aligned_cols=127 Identities=24% Similarity=0.294 Sum_probs=113.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc--EEEeCCCCC-----------CCCCCHHHHHHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVAAEDVH-----------RGKPDPEMFVYA 268 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~~e~v~-----------~~KP~~~~~~~~ 268 (368)
..++||+.++|+.|+++|++++|+||++...+...++++|+..+|+ .+++++++. .+||+|++|..+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~a 293 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCHHHHHHH
Confidence 4788999999999999999999999999999999999999999999 899887754 489999999999
Q ss_pred HHHcC--------------CCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC----cccc--CCCcEEEcCchhhhHHH
Q 043738 269 AQLLK--------------FIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP----VYEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 269 le~lg--------------i~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~----~~~~--~~ad~vv~sl~eL~~~~ 328 (368)
++.+| ++|++|++|||+.+|+.+|+++||.+|++..+.. ...+ ..||++++++.|+...+
T Consensus 294 ~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l 373 (384)
T 1qyi_A 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL 373 (384)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred HHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHHHHHHH
Confidence 99999 8999999999999999999999999999986543 1222 25999999999997655
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.4e-21 Score=168.15 Aligned_cols=179 Identities=9% Similarity=0.052 Sum_probs=123.9
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCC-CCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKS-PPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~-~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
.++|+|||||||+|+. ..+..++.++++ |.. .+...+ . .......+..++ ......+.+.|..
T Consensus 2 ~k~viFDlDGTL~Ds~-~~~~~~~~~~~~--g~~~~~~~~~-~---~~~~~~~~~~~~---------~~~~~~~~~~~~~ 65 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFE-AGLLRGFRRRFP--EEPHVPLEQR-R---GFLAREQYRALR---------PDLADKVASVYEA 65 (193)
T ss_dssp CEEEEECSBTTTBCHH-HHHHHHHHHHST--TSCCCCGGGC-C---SSCHHHHHHHHC---------TTHHHHHHHHHTS
T ss_pred CcEEEEECCCcCccch-hHHHHHHHHHhc--CCCCCCHHHH-H---HhhHHHHHHHHh---------HHHHHHHHHHHHh
Confidence 4789999999999865 455566666665 654 232221 1 111222222221 1122333444443
Q ss_pred H-HCCccccCccHHHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 197 L-QGGIYRLRTGSKEFVNILMHY-KIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 197 ~-~~~~~~~~pg~~elL~~Lk~~-Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
. ......++||+.++|+.|++. |++++++||+....+...++++|+ |+.+++++ +++++|+
T Consensus 66 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~~--------------~~~~~~~ 128 (193)
T 2i7d_A 66 PGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGPQ--------------FVERIIL 128 (193)
T ss_dssp TTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCHH--------------HHTTEEE
T ss_pred cCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCHH--------------HHHHcCC
Confidence 3 233468899999999999999 999999999998889999999888 77776542 7889999
Q ss_pred CCCcEEEEcCCHhh----HHHHH-HcCCeEEEEcCCCCcc-ccCCCcEEEcCchhhhHHHH
Q 043738 275 IPERCIVFGNSNQT----VEAAH-DARMKCVAVASKHPVY-ELGAADLVVRHLDELSVVDL 329 (368)
Q Consensus 275 ~p~~~l~IGDs~nD----l~~A~-~aG~~~I~v~~~~~~~-~~~~ad~vv~sl~eL~~~~l 329 (368)
+|++|++|||+.+| +.+|+ ++||.+|++..++... .+......++++.+....++
T Consensus 129 ~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 189 (193)
T 2i7d_A 129 TRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDNWREIL 189 (193)
T ss_dssp CSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSCHHHHH
T ss_pred CcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHHHHHHh
Confidence 99999999999998 99999 9999999998543322 22222347899955544444
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-20 Score=164.02 Aligned_cols=177 Identities=10% Similarity=0.054 Sum_probs=125.3
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
++++|+|||||||+|+. ..+..++.++++.++ ...... +.+....+.+.. + .......+. +.|..
T Consensus 3 ~~k~viFDlDGTL~Ds~-~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~-~----~~~~~~~~~----~~~~~ 67 (197)
T 1q92_A 3 RALRVLVDMDGVLADFE-GGFLRKFRARFPDQP-FIALED----RRGFWVSEQYGR-L----RPGLSEKAI----SIWES 67 (197)
T ss_dssp CCEEEEECSBTTTBCHH-HHHHHHHHHHCTTSC-CCCGGG----CCSSCHHHHHHH-H----STTHHHHHH----HHHTS
T ss_pred CceEEEEeCCCCCccCc-HHHHHHHHHHHhcCC-CCCHHH----hcCCcHHHHHHh-c----CHHHHHHHH----HHHHh
Confidence 46899999999999865 455577777766552 222222 223444443332 1 111222222 22222
Q ss_pred H-HCCccccCccHHHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHcCccc-cccEEEeCCCCCCCCCCHHHHHHHHHHcC
Q 043738 197 L-QGGIYRLRTGSKEFVNILMHY-KIPMALVSTHPRKTLETAIDSIGIEE-YFTAIVAAEDVHRGKPDPEMFVYAAQLLK 273 (368)
Q Consensus 197 ~-~~~~~~~~pg~~elL~~Lk~~-Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd~iv~~e~v~~~KP~~~~~~~~le~lg 273 (368)
. ......++||+.++|+.|++. |++++|+||+....++..++++|+.. +|+ ..+++++|
T Consensus 68 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~------------------~~~~~~l~ 129 (197)
T 1q92_A 68 KNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG------------------PDFLEQIV 129 (197)
T ss_dssp TTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC------------------GGGGGGEE
T ss_pred hhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch------------------HHHHHHhc
Confidence 1 222468899999999999999 99999999999888888999999988 886 56778899
Q ss_pred CCCCcEEEEcCCHhh----HHHHH-HcCCeEEEEcCCCCcc-ccCCCcEEEcCch-hhhH
Q 043738 274 FIPERCIVFGNSNQT----VEAAH-DARMKCVAVASKHPVY-ELGAADLVVRHLD-ELSV 326 (368)
Q Consensus 274 i~p~~~l~IGDs~nD----l~~A~-~aG~~~I~v~~~~~~~-~~~~ad~vv~sl~-eL~~ 326 (368)
+.|++|++|||+.+| +.+|+ ++||.+|++..+.... .+.....++.++. ++..
T Consensus 130 ~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~ 189 (197)
T 1q92_A 130 LTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKA 189 (197)
T ss_dssp ECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHH
T ss_pred cCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHH
Confidence 999999999999999 99999 9999999998654432 2222345799995 5543
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.76 E-value=6.5e-19 Score=165.13 Aligned_cols=113 Identities=15% Similarity=0.196 Sum_probs=93.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|++.|++++++||.....+...++.+|+..+|+.++ + ++ ...++++++.. ++|++
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~-----~--~~----K~~~~~~l~~~-~~~~~ 229 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-----P--HQ----KSEEVKKLQAK-EVVAF 229 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC-----T--TC----HHHHHHHHTTT-CCEEE
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC-----h--HH----HHHHHHHHhcC-CeEEE
Confidence 4789999999999999999999999999999999999999998887664 1 12 27788999999 99999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|||+.||+.+|+++|+. +.+... .......||+++ +++.++...+
T Consensus 230 vGDs~~Di~~a~~ag~~-v~~~~~-~~~~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 230 VGDGINDAPALAQADLG-IAVGSG-SDVAVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp EECTTTCHHHHHHSSEE-EEECCC-SCCSSCCSSEEESSSCTHHHHHHH
T ss_pred EECCHHHHHHHHHCCee-EEeCCC-CHHHHhhCCEEEeCCCHHHHHHHH
Confidence 99999999999999998 444322 222234599999 9999986654
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=7.6e-20 Score=167.56 Aligned_cols=78 Identities=23% Similarity=0.262 Sum_probs=65.6
Q ss_pred eCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCC-CCccc-c---CCCcEEEcCchhh
Q 043738 251 AAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASK-HPVYE-L---GAADLVVRHLDEL 324 (368)
Q Consensus 251 ~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~-~~~~~-~---~~ad~vv~sl~eL 324 (368)
+.+.+..+||++.+|..+++++|+++++|++|||+. ||++||+.+|+.+++|.++ ..... . ..||++++++.|+
T Consensus 182 ~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el 261 (271)
T 2x4d_A 182 GIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEA 261 (271)
T ss_dssp TCCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHH
T ss_pred CCceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHH
Confidence 445567799999999999999999999999999998 9999999999999999865 32222 2 2499999999999
Q ss_pred hHHH
Q 043738 325 SVVD 328 (368)
Q Consensus 325 ~~~~ 328 (368)
...+
T Consensus 262 ~~~l 265 (271)
T 2x4d_A 262 VDLL 265 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8.6e-19 Score=152.73 Aligned_cols=103 Identities=11% Similarity=0.209 Sum_probs=90.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCC---------------ChHHHHHHHHHcCccccccEEEeC-----CCCCCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTH---------------PRKTLETAIDSIGIEEYFTAIVAA-----EDVHRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~---------------~~~~~~~~l~~~gl~~~Fd~iv~~-----e~v~~~KP~ 261 (368)
..++||+.++|+.|++.|++++|+||+ ....+...++++|+. |+.++.+ ++++..||+
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~~KP~ 118 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDCRKPK 118 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSSSTTS
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccccCCC
Confidence 578999999999999999999999998 567888899999987 8888654 778899999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+++|..+++++|++|++|+||||+.+|+.+|+++||.+|++..+.
T Consensus 119 p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 119 VKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp CGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 999999999999999999999999999999999999999988664
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-19 Score=151.89 Aligned_cols=109 Identities=14% Similarity=0.151 Sum_probs=91.4
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEc
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFG 283 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IG 283 (368)
+.++..++|+.|+++|++++++||.+...+...++++|+..+|+. +||++++|..++++++++|++|++||
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 345668999999999999999999999999999999999877753 69999999999999999999999999
Q ss_pred CCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 284 NSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 284 Ds~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
|+.+|+.+|+.+|+.+++.++ .......|+++++++.+
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~--~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNA--VEEVRKVAVYITQRNGG 145 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTS--CHHHHHHCSEECSSCSS
T ss_pred CCHHHHHHHHHCCCeEEecCc--cHHHHhhCCEEecCCCC
Confidence 999999999999998765432 11112248999999876
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-18 Score=147.34 Aligned_cols=99 Identities=9% Similarity=0.141 Sum_probs=86.3
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
+|+.|++.|++++++||.....++..++++|+..+|+.+ ||+++++..+++++|+++++|++|||+.||+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGV---------VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeeccc---------CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 789999999999999999999999999999998777653 99999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
+|+.+|+.+++.++ .......||+++.+
T Consensus 110 ~~~~ag~~~~~~~~--~~~~~~~ad~v~~~ 137 (164)
T 3e8m_A 110 LLKRVGIAGVPASA--PFYIRRLSTIFLEK 137 (164)
T ss_dssp HHTTSSEEECCTTS--CHHHHTTCSSCCCC
T ss_pred HHHHCCCeEEcCCh--HHHHHHhCcEEecc
Confidence 99999997766332 22223458999987
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-20 Score=172.83 Aligned_cols=112 Identities=17% Similarity=0.268 Sum_probs=89.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
.++||+.++|+.|++.|++++++||.....+...++++|+..+|+.+++++. ....+...+.+ +|++|
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k-------~~~~k~~~~~~-----~~~~v 211 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEK-------AEKVKEVQQKY-----VTAMV 211 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGH-------HHHHHHHHTTS-----CEEEE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHH-------HHHHHHHHhcC-----CEEEE
Confidence 6889999999999999999999999999999999999999999998876653 33344444333 79999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||++|++.+|+.+++ +.........+++++ ++++++...+
T Consensus 212 GD~~nDi~~~~~Ag~~va~--~~~~~~~~~~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 212 GDGVNDAPALAQADVGIAI--GAGTDVAVETADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp ECTTTTHHHHHHSSEEEEC--SCCSSSCCCSSSEECSSCCTHHHHHHH
T ss_pred eCCchhHHHHHhCCceEEe--cCCcHHHHhhCCEEEeCCCHHHHHHHH
Confidence 9999999999999975555 223333344588888 8898887655
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.2e-18 Score=148.97 Aligned_cols=108 Identities=15% Similarity=0.166 Sum_probs=90.4
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
+|+.|++.|++++++||.....++..++++|+..+|+.+ ++|++.+..+++++|+++++|++|||+.||++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~ 124 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLP 124 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHHH
Confidence 899999999999999999999999999999998888764 66789999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcC------chhhhHHHH
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRH------LDELSVVDL 329 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s------l~eL~~~~l 329 (368)
+++.+|+.+++.+ ........||+++.+ +.++...++
T Consensus 125 ~~~~ag~~~~~~~--~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~ 167 (189)
T 3mn1_A 125 VIRRVGLGMAVAN--AASFVREHAHGITRAQGGEGAAREFCELIL 167 (189)
T ss_dssp HHHHSSEEEECTT--SCHHHHHTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHCCCeEEeCC--ccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999998765422 222233458999988 455554443
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.6e-19 Score=164.39 Aligned_cols=123 Identities=17% Similarity=0.172 Sum_probs=98.0
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHH---HHHHcCccccccEEEeCCC-CCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLET---AIDSIGIEEYFTAIVAAED-VHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~---~l~~~gl~~~Fd~iv~~e~-v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
.+++++.++++.+ ..|+++ ++||........ .++..++..+|+.+++.+. +..+||++.+|..+++++|++|++
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~e 214 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER 214 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGG
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCce
Confidence 4568889999999 778887 889875432221 2223346667887777887 889999999999999999999999
Q ss_pred EEEEcCCH-hhHHHHHHcCCeEEEEcCCCCc-ccc----CCCcEEEcCchhhhHH
Q 043738 279 CIVFGNSN-QTVEAAHDARMKCVAVASKHPV-YEL----GAADLVVRHLDELSVV 327 (368)
Q Consensus 279 ~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~-~~~----~~ad~vv~sl~eL~~~ 327 (368)
|++|||+. ||++||+.+|+.++++.++... ..+ ..+|++++++.||...
T Consensus 215 ~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~ 269 (271)
T 1vjr_A 215 MAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 269 (271)
T ss_dssp EEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 99999995 9999999999999999966443 222 2589999999998643
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.73 E-value=9.8e-20 Score=158.74 Aligned_cols=107 Identities=15% Similarity=0.096 Sum_probs=87.9
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
+|+.|++.|++++++|+.....++..++++|+. +| .+ .||+++.+..+++++|+++++|++|||+.||++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~----~~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~ 116 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VL----HG-----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLP 116 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EE----ES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eE----eC-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHH
Confidence 899999999999999999999999999999987 33 22 289999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcC------chhhhHHHH
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRH------LDELSVVDL 329 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s------l~eL~~~~l 329 (368)
+++.+|+.+++.+ ........||+++.+ +.++...++
T Consensus 117 ~~~~ag~~v~~~~--~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 117 CFALVGWPVAVAS--AHDVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp HHHHSSEEEECTT--CCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHCCCeEECCC--hhHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999998765522 222222348999988 556654443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.2e-19 Score=166.48 Aligned_cols=124 Identities=15% Similarity=0.149 Sum_probs=100.2
Q ss_pred HHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 192 EIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 192 ~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
..|...+.....++||+.++|+.|++.|++++++||.+...++..++++|+..+|+.++ |+.+..++++
T Consensus 125 ~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~-----------p~~k~~~~~~ 193 (263)
T 2yj3_A 125 GEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS-----------PEDKVRIIEK 193 (263)
Confidence 33333333345789999999999999999999999999999999999999999998876 3456788999
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
++..+++|+||||+.||+.+++++|+.+.+.. ........||+++ +++.+|...+
T Consensus 194 l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~--~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 194 LKQNGNKVLMIGDGVNDAAALALADVSVAMGN--GVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 99999999999999999999999998765532 2222233589999 8999886543
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-18 Score=155.77 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=82.4
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC---CCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE---DVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e---~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.+.+++.++|+.|+++|++++++||+....+...++. +..+|+.++.+. .....||++++|..+++++|+ |
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~ 161 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R 161 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence 4578999999999999999999999977666666665 566777663322 245689999999999999998 9
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
++|||+.+|+.+|+++||.+|++.++.
T Consensus 162 l~VGDs~~Di~aA~~aG~~~i~v~~g~ 188 (211)
T 2b82_A 162 IFYGDSDNDITAARDVGARGIRILRAS 188 (211)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCCT
T ss_pred EEEECCHHHHHHHHHCCCeEEEEecCC
Confidence 999999999999999999999998654
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-17 Score=149.39 Aligned_cols=100 Identities=16% Similarity=0.191 Sum_probs=87.3
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
+|+.|++.|++++|+|+.....++..++++|+..+|+.+ ||+++++..+++++|+++++|++|||+.||++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~ 154 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDWP 154 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHHH
Confidence 899999999999999999999999999999998888754 88899999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcCc
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRHL 321 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl 321 (368)
+++.+|+.+++.++ .......||+++.+.
T Consensus 155 ~~~~ag~~~a~~~~--~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 155 VMAQVGLSVAVADA--HPLLLPKAHYVTRIK 183 (211)
T ss_dssp HHTTSSEEEECTTS--CTTTGGGSSEECSSC
T ss_pred HHHHCCCEEEeCCc--cHHHHhhCCEEEeCC
Confidence 99999988665332 222233599999886
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.6e-18 Score=147.42 Aligned_cols=108 Identities=17% Similarity=0.204 Sum_probs=90.9
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 043738 206 TGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS 285 (368)
Q Consensus 206 pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs 285 (368)
+...++|+.|+++|++++++||.+...+...++++|+..+|+. .||++..+..+++++|+++++|++|||+
T Consensus 38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~ 108 (180)
T 1k1e_A 38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG---------KLEKETACFDLMKQAGVTAEQTAYIGDD 108 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES---------CSCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC---------CCCcHHHHHHHHHHcCCCHHHEEEECCC
Confidence 3445799999999999999999999999999999999877642 4899999999999999999999999999
Q ss_pred HhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhh
Q 043738 286 NQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDEL 324 (368)
Q Consensus 286 ~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL 324 (368)
.||+++++.+|+.+++.++ .......||+++.+..+.
T Consensus 109 ~~Di~~~~~ag~~~~~~~~--~~~~~~~ad~v~~~~~~~ 145 (180)
T 1k1e_A 109 SVDLPAFAACGTSFAVADA--PIYVKNAVDHVLSTHGGK 145 (180)
T ss_dssp GGGHHHHHHSSEEEECTTS--CHHHHTTSSEECSSCTTT
T ss_pred HHHHHHHHHcCCeEEeCCc--cHHHHhhCCEEecCCCCC
Confidence 9999999999998776332 222224599999887543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.3e-18 Score=151.00 Aligned_cols=101 Identities=15% Similarity=0.187 Sum_probs=85.6
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
.|+.|++.|++++|+||.....++..++++|+..+|+.+ ||++..+..+++++|+++++|++|||+.||++
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~---------k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~ 130 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ---------DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWP 130 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC---------SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC---------CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHH
Confidence 488899999999999999999999999999998776542 89999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcCch
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
|++.+|+.+++.+ ........||+++.+..
T Consensus 131 ~~~~ag~~va~~n--a~~~~~~~ad~v~~~~~ 160 (195)
T 3n07_A 131 VMEKVALRVCVAD--GHPLLAQRANYVTHIKG 160 (195)
T ss_dssp HHTTSSEEEECTT--SCHHHHHHCSEECSSCT
T ss_pred HHHHCCCEEEECC--hHHHHHHhCCEEEcCCC
Confidence 9999998765522 22222234899998753
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=6.9e-18 Score=149.00 Aligned_cols=100 Identities=13% Similarity=0.209 Sum_probs=85.8
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
.|+.|++.|++++++||.+...+...++.+|+..+|+.+ ||+++++..+++++|+++++|++|||+.||+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 124 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLP 124 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 478899999999999999999999999999998877754 89999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcCc
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRHL 321 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl 321 (368)
+++.+|+.+++ . .........||+++.+.
T Consensus 125 ~~~~ag~~~~~-~-~~~~~~~~~ad~v~~~~ 153 (191)
T 3n1u_A 125 LIQQVGLGVAV-S-NAVPQVLEFADWRTERT 153 (191)
T ss_dssp HHHHSSEEEEC-T-TCCHHHHHHSSEECSSC
T ss_pred HHHHCCCEEEe-C-CccHHHHHhCCEEecCC
Confidence 99999998743 2 22222223489999884
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=147.12 Aligned_cols=72 Identities=22% Similarity=0.276 Sum_probs=62.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-HhhHHHHHHcCCeEEEEcCCCCc-cccC--------CCcEEEcCchhh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNS-NQTVEAAHDARMKCVAVASKHPV-YELG--------AADLVVRHLDEL 324 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs-~nDl~~A~~aG~~~I~v~~~~~~-~~~~--------~ad~vv~sl~eL 324 (368)
...+||++.+|..+++++|+++++|++|||+ .||+.||+.+|+.+++|.++... ..+. .||++++++.||
T Consensus 183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 5679999999999999999999999999999 59999999999999999965433 3333 599999999998
Q ss_pred hH
Q 043738 325 SV 326 (368)
Q Consensus 325 ~~ 326 (368)
..
T Consensus 263 ~~ 264 (268)
T 3qgm_A 263 VE 264 (268)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.4e-17 Score=151.15 Aligned_cols=82 Identities=20% Similarity=0.312 Sum_probs=69.2
Q ss_pred ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-HhhHHHHHHcCCeEEEEcCCCC-ccccC----CCcEE
Q 043738 244 EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS-NQTVEAAHDARMKCVAVASKHP-VYELG----AADLV 317 (368)
Q Consensus 244 ~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs-~nDl~~A~~aG~~~I~v~~~~~-~~~~~----~ad~v 317 (368)
.+|+.+++.+....+||++.+|..+++++|+++++|++|||+ .||+.||+.+|+.+|+|.++.. ...+. .||++
T Consensus 167 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~ 246 (264)
T 3epr_A 167 ALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYV 246 (264)
T ss_dssp HHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEE
T ss_pred HHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEE
Confidence 345555667778889999999999999999999999999999 6999999999999999985543 33332 59999
Q ss_pred EcCchhhh
Q 043738 318 VRHLDELS 325 (368)
Q Consensus 318 v~sl~eL~ 325 (368)
++++.||.
T Consensus 247 ~~~l~~l~ 254 (264)
T 3epr_A 247 LASLDEWT 254 (264)
T ss_dssp ESCGGGCC
T ss_pred ECCHHHHh
Confidence 99999883
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-18 Score=163.42 Aligned_cols=124 Identities=15% Similarity=0.153 Sum_probs=101.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHH--H-HHHHHcC-ccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTL--E-TAIDSIG-IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~--~-~~l~~~g-l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
.+++++.++++.|++.|+ ++++||...... . ..+..+| +..+|+.+++++++..+||++.+|..+++++|++|++
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~e 234 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPAR 234 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGGG
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChHH
Confidence 457899999999999898 999999875543 1 2333344 6677888888888889999999999999999999999
Q ss_pred EEEEcCCH-hhHHHHHHcCCeEEEEcCCCCc-ccc----------CCCcEEEcCchhhhHH
Q 043738 279 CIVFGNSN-QTVEAAHDARMKCVAVASKHPV-YEL----------GAADLVVRHLDELSVV 327 (368)
Q Consensus 279 ~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~~-~~~----------~~ad~vv~sl~eL~~~ 327 (368)
|++|||+. ||++||+.+|+.+++|.++... ..+ ..+|++++++.||...
T Consensus 235 ~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~ 295 (306)
T 2oyc_A 235 TLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEG 295 (306)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGG
T ss_pred EEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHH
Confidence 99999997 9999999999999999965432 111 2589999999999543
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.67 E-value=6.3e-18 Score=157.62 Aligned_cols=117 Identities=18% Similarity=0.277 Sum_probs=98.8
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCChHHH--H--HHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc----CCCCCc
Q 043738 207 GSKEFVNILMHYKIPMALVSTHPRKTL--E--TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL----KFIPER 278 (368)
Q Consensus 207 g~~elL~~Lk~~Gi~vaivSn~~~~~~--~--~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l----gi~p~~ 278 (368)
...++++.|+++|++ +++||.+.... . ..++..++..+|+.+++++++..+||++++|..+++++ |++|++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~ 227 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE 227 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence 566777789999999 99999876655 3 22356678889999999998889999999999999999 999999
Q ss_pred EEEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc--------CCCcEEEcCchhh
Q 043738 279 CIVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL--------GAADLVVRHLDEL 324 (368)
Q Consensus 279 ~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~--------~~ad~vv~sl~eL 324 (368)
|++|||+. +|+.+|+++||.+|++.++.. ..++ ..+|++++++.||
T Consensus 228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 99999996 999999999999999996543 2222 3599999999887
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.3e-16 Score=138.56 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=86.4
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
+|+.|++.|++++++||.+...+...++++|+..+|+. .||++.++..+++++|+++++|++|||+.+|+.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~---------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG---------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS---------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC---------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 88999999999999999999999999999998876643 599999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcCc
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRHL 321 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl 321 (368)
+|+.+|+.+++.++.. .....||+++++.
T Consensus 132 ~a~~ag~~~~~~~~~~--~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 132 VMEKVGLSVAVADAHP--LLIPRADYVTRIA 160 (188)
T ss_dssp HHTTSSEEEECTTSCT--TTGGGSSEECSSC
T ss_pred HHHHCCCEEEecCcCH--HHHhcCCEEEeCC
Confidence 9999999876543322 1223489999987
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-18 Score=158.83 Aligned_cols=120 Identities=17% Similarity=0.140 Sum_probs=98.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHH--HHHHHH-cCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTL--ETAIDS-IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~--~~~l~~-~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.++|++.++++.|+ .|+++ ++||...... ...+.. .++..+|+.+++++.+..+||++.+|..++++ ++|++|
T Consensus 130 ~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~~~ 205 (263)
T 1zjj_A 130 LTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGEEL 205 (263)
T ss_dssp CBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTCEE
T ss_pred CCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcccE
Confidence 56889999999999 89988 9999876544 222322 45667888888888888999999999999999 999999
Q ss_pred EEEcCCH-hhHHHHHHcCCeEEEEcCCCC-ccccC----CCcEEEcCchhhhH
Q 043738 280 IVFGNSN-QTVEAAHDARMKCVAVASKHP-VYELG----AADLVVRHLDELSV 326 (368)
Q Consensus 280 l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~~----~ad~vv~sl~eL~~ 326 (368)
++|||+. +|+.+|+++||.+|+|..+.. ..++. .+|++++++.++..
T Consensus 206 ~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~ 258 (263)
T 1zjj_A 206 WMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELID 258 (263)
T ss_dssp EEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGG
T ss_pred EEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHH
Confidence 9999996 999999999999999986543 22222 58999999999954
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-16 Score=145.80 Aligned_cols=86 Identities=16% Similarity=0.175 Sum_probs=69.7
Q ss_pred cccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-HhhHHHHHHcCCeEEEEcCCCC-ccccC----CCcE
Q 043738 243 EEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS-NQTVEAAHDARMKCVAVASKHP-VYELG----AADL 316 (368)
Q Consensus 243 ~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs-~nDl~~A~~aG~~~I~v~~~~~-~~~~~----~ad~ 316 (368)
..+|+.+++.+....+||++.+|+.+++++|+++++|++|||+ .||+.||+.+|+.+++++++.. ..++. .||+
T Consensus 167 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~ 246 (266)
T 3pdw_A 167 TSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTH 246 (266)
T ss_dssp HHHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSE
T ss_pred HHHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCE
Confidence 3445556666777889999999999999999999999999999 6999999999999999995543 33333 3999
Q ss_pred EEcCchhhhHHH
Q 043738 317 VVRHLDELSVVD 328 (368)
Q Consensus 317 vv~sl~eL~~~~ 328 (368)
+++++.||..-.
T Consensus 247 v~~~~~el~~~~ 258 (266)
T 3pdw_A 247 AIDSLTEWIPYI 258 (266)
T ss_dssp EESSGGGGHHHH
T ss_pred EeCCHHHHHHHh
Confidence 999999996543
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.8e-16 Score=154.96 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=88.5
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCC------------hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHP------------RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~------------~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
++||+.++|+.|+++|++++|+||.. ...+...++.+|+. |+.+++++++...||++.+|..++++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~~ 165 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQEQ 165 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTSTTSSHHHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCCCCCHHHHHHHHHH
Confidence 78999999999999999999999965 22367788889985 99999999999999999999999999
Q ss_pred cC----CCCCcEEEEcCCH-----------------hhHHHHHHcCCeEEEEc
Q 043738 272 LK----FIPERCIVFGNSN-----------------QTVEAAHDARMKCVAVA 303 (368)
Q Consensus 272 lg----i~p~~~l~IGDs~-----------------nDl~~A~~aG~~~I~v~ 303 (368)
+| ++|++|+||||+. +|+.+|+++|+.++...
T Consensus 166 l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~pe 218 (416)
T 3zvl_A 166 ANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATPE 218 (416)
T ss_dssp SSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECHH
T ss_pred hCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCcH
Confidence 98 9999999999997 89999999999976543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-17 Score=155.81 Aligned_cols=119 Identities=13% Similarity=0.142 Sum_probs=95.6
Q ss_pred ccCccHHHHHHHHHhC-CCcEEEEcCC---------------------ChHHHHHHHHHcCccccccEE----------E
Q 043738 203 RLRTGSKEFVNILMHY-KIPMALVSTH---------------------PRKTLETAIDSIGIEEYFTAI----------V 250 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~-Gi~vaivSn~---------------------~~~~~~~~l~~~gl~~~Fd~i----------v 250 (368)
...+++.++++.++++ |+++++.|+. ....+...++++|+..+|..+ +
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 4568899999999887 9999999876 445667777888888777655 5
Q ss_pred eCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 251 AAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 251 ~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+.+....+++++..+..+++++|+++++|++|||+.||+.|++.+|+.+++ +.........|++++.+..+
T Consensus 202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~--~~~~~~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL--KNATQEAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC--TTCCHHHHHHCCCBCSSCHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE--CCccHHHHHhCCEEcCCCCc
Confidence 666677889999999999999999999999999999999999999976554 22222222348999988776
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.61 E-value=3e-15 Score=130.05 Aligned_cols=165 Identities=10% Similarity=0.004 Sum_probs=105.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIY-QA 196 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~-~~ 196 (368)
+++|||||||||+|+.. .+..++.+ .+|...+...+ .|....+.+ .. ... . +.+.+ ..
T Consensus 4 ~~~viFD~DGtL~Ds~~-~~~~~~~~---~~g~~~~~~~~----~g~~~~~~~----~~--~~~---~----~~~~~~~~ 62 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLG-AVVKAVNE---RADLNIKMESL----NGKKLKHMI----PE--HEG---L----VMDILKEP 62 (180)
T ss_dssp CCEEEEETBTTTBCHHH-HHHHHHHH---HSCCCCCGGGC----TTCCC--------------C---H----HHHHHHST
T ss_pred ccEEEEeCCCcccccHH-HHHHHHHH---HhCCCCCHHHH----cCccHHHHC----Cc--hHH---H----HHHHHhCc
Confidence 47999999999998653 33344443 56765543331 233322211 10 000 1 11121 11
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCC---Ch--HHHHHHHHH-cCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTH---PR--KTLETAIDS-IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~---~~--~~~~~~l~~-~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.......++||+.++|+.|++. ++++|+||. .. ......+.. ++...+|+.++++++.
T Consensus 63 ~~~~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~--------------- 126 (180)
T 3bwv_A 63 GFFRNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN--------------- 126 (180)
T ss_dssp TGGGSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG---------------
T ss_pred chhccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC---------------
Confidence 1222368899999999999985 999999998 32 122344544 6777788899888762
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHH
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
++ ++|++|||+.+|+. ..+| .+|+++.+.... ..++++++++.||...+
T Consensus 127 ~l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~--~~~~~~i~~~~el~~~l 175 (180)
T 3bwv_A 127 II----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY--EHRFERVSGWRDVKNYF 175 (180)
T ss_dssp GB----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT--CCSSEEECSHHHHHHHH
T ss_pred ee----cccEEecCCcchHH--HhCC-CeEEeCCCcccC--CCCceecCCHHHHHHHH
Confidence 12 77999999999985 5689 999998544322 35899999999986543
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.58 E-value=8.3e-16 Score=142.47 Aligned_cols=77 Identities=17% Similarity=0.111 Sum_probs=59.2
Q ss_pred cccEEEeC----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 245 YFTAIVAA----EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 245 ~Fd~iv~~----e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
.+..+.++ +....+.+|+.+++.+++++|+++++|++|||+.||++|++.+|+++++ +.........||+++.+
T Consensus 178 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam--~na~~~~k~~A~~v~~~ 255 (279)
T 4dw8_A 178 KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM--GNAQEPVKKAADYITLT 255 (279)
T ss_dssp TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHCSEECCC
T ss_pred CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc--CCCcHHHHHhCCEEcCC
Confidence 35555444 3356778889999999999999999999999999999999999976555 22222223349999988
Q ss_pred chh
Q 043738 321 LDE 323 (368)
Q Consensus 321 l~e 323 (368)
.++
T Consensus 256 ~~e 258 (279)
T 4dw8_A 256 NDE 258 (279)
T ss_dssp GGG
T ss_pred CCC
Confidence 775
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.4e-15 Score=140.16 Aligned_cols=124 Identities=11% Similarity=0.038 Sum_probs=83.2
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-CccccccEEEeC----CCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI-GIEEYFTAIVAA----EDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~-gl~~~Fd~iv~~----e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
.+.+++.+++..+.....++.+..+ .......++.+ +....+..+.++ +....+.+|+.+++.+++++|++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~ 219 (290)
T 3dnp_A 142 QFVESLSDLLMDEPVSAPVIEVYTE--HDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMD 219 (290)
T ss_dssp EECSCHHHHHHHSCCCCSEEEEECC--GGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGG
T ss_pred cccCCHHHHHhcCCCCceEEEEeCC--HHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHH
Confidence 3456677777776666677755333 34444444442 112234444433 2345678889999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh--hhHHHHh
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE--LSVVDLK 330 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e--L~~~~l~ 330 (368)
+|++|||+.||++|++.+|+.+++- +........||+++.+.++ +...+.+
T Consensus 220 ~~i~~GD~~NDi~m~~~ag~~vam~--na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 220 DVVAIGHQYDDLPMIELAGLGVAMG--NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECT--TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred HEEEECCchhhHHHHHhcCCEEEec--CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 9999999999999999999866652 2222223349999999887 5444433
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=125.93 Aligned_cols=98 Identities=10% Similarity=0.049 Sum_probs=78.1
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHH--HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhh
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAID--SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT 288 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~--~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nD 288 (368)
.|+.|+++|++++|+|+. ..+...++ .+|+. + +.+ .+++++.+..+++++|+++++|++|||+.||
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nD 111 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----EVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVSD 111 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----ECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGGG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----EEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHhH
Confidence 688999999999999998 67788888 55654 3 222 3678999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCCccccCCCcEEEcCch
Q 043738 289 VEAAHDARMKCVAVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 289 l~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
++|++.+|+.+++ ... ...-...||+++.+..
T Consensus 112 i~~~~~ag~~~a~-~na-~~~~k~~Ad~v~~~~~ 143 (168)
T 3ewi_A 112 EECLKRVGLSAVP-ADA-CSGAQKAVGYICKCSG 143 (168)
T ss_dssp HHHHHHSSEEEEC-TTC-CHHHHTTCSEECSSCT
T ss_pred HHHHHHCCCEEEe-CCh-hHHHHHhCCEEeCCCC
Confidence 9999999998654 222 2222345999998754
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.52 E-value=6.9e-15 Score=137.11 Aligned_cols=103 Identities=14% Similarity=0.133 Sum_probs=70.9
Q ss_pred hCCCcEEEEc-CCCh-HHHHHHHHHcCccccccEEEeCC----CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 217 HYKIPMALVS-THPR-KTLETAIDSIGIEEYFTAIVAAE----DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 217 ~~Gi~vaivS-n~~~-~~~~~~l~~~gl~~~Fd~iv~~e----~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
...+++.++. .... .....+.+.++ ..+..+.++. ....+.+|+.+++.+++++|++++++++|||+.||++
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ 241 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIE 241 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 4567777773 2211 12233334443 3345555543 2456777899999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
|++.+|+.+++ ++........||+++.+.++
T Consensus 242 ml~~ag~~vam--~na~~~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 242 MLQNAGISYAV--SNARQEVIAAAKHTCAPYWE 272 (283)
T ss_dssp HHHHSSEEEEE--TTSCHHHHHHSSEEECCGGG
T ss_pred HHHhCCCEEEc--CCCCHHHHHhcCeECCCCCC
Confidence 99999977666 22222223359999998886
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.51 E-value=6.6e-15 Score=135.62 Aligned_cols=100 Identities=8% Similarity=0.051 Sum_probs=72.4
Q ss_pred CCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC------CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHH
Q 043738 219 KIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE------DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAA 292 (368)
Q Consensus 219 Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e------~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A 292 (368)
++...++. ........+.+.++.. |+.+.+.. ....+++|+.++..+++++|+++++|++|||+.||++|+
T Consensus 156 ~~~ki~~~-~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~ 232 (274)
T 3fzq_A 156 DIHKICLW-SNEKVFDEVKDILQDK--MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMF 232 (274)
T ss_dssp CCCEEEEE-CCHHHHHHHHHHHGGG--EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHH
T ss_pred CeEEEEEE-cCHHHHHHHHHHhhcc--eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHH
Confidence 33333444 4556666666666532 55555443 356788999999999999999999999999999999999
Q ss_pred HHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 293 HDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 293 ~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+.+|+.+++ +.........||+++.+.++
T Consensus 233 ~~ag~~vam--~na~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 233 QASDVTIAM--KNSHQQLKDIATSICEDIFD 261 (274)
T ss_dssp HTCSEEEEE--TTSCHHHHHHCSEEECCGGG
T ss_pred HhcCceEEe--cCccHHHHHhhhheeCCCch
Confidence 999976665 22222233359999998875
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.7e-15 Score=141.35 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=70.9
Q ss_pred cEEEEcCCChHHHHHHHHHcC--ccc-cccEEEeCC----CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHH
Q 043738 221 PMALVSTHPRKTLETAIDSIG--IEE-YFTAIVAAE----DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH 293 (368)
Q Consensus 221 ~vaivSn~~~~~~~~~l~~~g--l~~-~Fd~iv~~e----~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~ 293 (368)
++.+.+. .......++.+. +.. .|..+.++. ....+.+|+.+++.+++++|+++++|++|||+.||++|++
T Consensus 184 ki~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~ 261 (304)
T 3l7y_A 184 KLTLQVK--EEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLK 261 (304)
T ss_dssp EEEEECC--GGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEEcC--HHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHH
Confidence 4444442 344455555442 333 455555443 2356777899999999999999999999999999999999
Q ss_pred HcCCeEEEEcCCCCccccCCCcEEEcCchh--hhHHH
Q 043738 294 DARMKCVAVASKHPVYELGAADLVVRHLDE--LSVVD 328 (368)
Q Consensus 294 ~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e--L~~~~ 328 (368)
.+|+.+++ +.........||+++.+.++ +...+
T Consensus 262 ~ag~~vam--~na~~~~k~~Ad~v~~~~~edGv~~~l 296 (304)
T 3l7y_A 262 LAKYSYAM--ANAPKNVKAAANYQAKSNDESGVLDVI 296 (304)
T ss_dssp HCTEEEEC--TTSCHHHHHHCSEECCCGGGTHHHHHH
T ss_pred hcCCeEEc--CCcCHHHHHhccEEcCCCCcchHHHHH
Confidence 99976555 22222223349999999877 54443
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=3.1e-16 Score=145.38 Aligned_cols=92 Identities=12% Similarity=0.135 Sum_probs=56.7
Q ss_pred hHHHHHHHHHcC--ccccccEEEeCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 230 RKTLETAIDSIG--IEEYFTAIVAAED----VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 230 ~~~~~~~l~~~g--l~~~Fd~iv~~e~----v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
.......++.+. +...+..+.++.. ...+..|+.+++.+++++|+++++|++|||+.||++|++.+|+.+++-+
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~n 240 (279)
T 3mpo_A 161 PQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGN 240 (279)
T ss_dssp HHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC--
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccC
Confidence 444455555543 2223444433332 2345568999999999999999999999999999999999997655533
Q ss_pred CCCCccccCCCcEEEcCchh
Q 043738 304 SKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 304 ~~~~~~~~~~ad~vv~sl~e 323 (368)
+.. .....||+++.+.++
T Consensus 241 a~~--~~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 241 AID--EVKEAAQAVTLTNAE 258 (279)
T ss_dssp -CC--HHHHHCSCBC-----
T ss_pred CCH--HHHHhcceeccCCCc
Confidence 222 222348999887664
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.48 E-value=4.4e-14 Score=127.77 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=83.1
Q ss_pred ccHHHHHHHHH-hC-CCcE-----------EEEc-CCChHHHHHHHHHcCccccccEEEeC----CCCCCCCCCHHHHHH
Q 043738 206 TGSKEFVNILM-HY-KIPM-----------ALVS-THPRKTLETAIDSIGIEEYFTAIVAA----EDVHRGKPDPEMFVY 267 (368)
Q Consensus 206 pg~~elL~~Lk-~~-Gi~v-----------aivS-n~~~~~~~~~l~~~gl~~~Fd~iv~~----e~v~~~KP~~~~~~~ 267 (368)
+.+.++++.++ .. |+.+ ++++ +.....+...++.++ .+|+.+ ++ +....++||+.++..
T Consensus 84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ei~~~~~~K~~~~~~ 160 (231)
T 1wr8_A 84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN--LNLVAV-DSGFAIHVKKPWINKGSGIEK 160 (231)
T ss_dssp SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSCEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcEEEEecCCCChHHHHHH
Confidence 55666666666 44 4443 6666 546677777888765 457666 44 234678999999999
Q ss_pred HHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 268 AAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 268 ~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
+++++|+++++|++|||+.||++|++.+|+.+ ++..+.. .....|++++.+.++
T Consensus 161 ~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v-~~~~~~~-~~~~~a~~v~~~~~e 214 (231)
T 1wr8_A 161 ASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV-AVAQAPK-ILKENADYVTKKEYG 214 (231)
T ss_dssp HHHHHTSCGGGEEEEECSGGGHHHHHHSSEEE-ECTTSCH-HHHTTCSEECSSCHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCCeE-EecCCCH-HHHhhCCEEecCCCc
Confidence 99999999999999999999999999999984 4443322 222359999998875
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.4e-14 Score=132.73 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=53.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
..+-.|..+++.+++++|+++++|++|||+.||++|++.+|+.+++ ++........|++++.+.++
T Consensus 179 ~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam--~na~~~~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 179 PAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM--GNAHEEVKRVADFVTKPVDK 244 (258)
T ss_dssp ESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE--TTCCHHHHHTCSEEECCGGG
T ss_pred ECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe--CCCcHHHHHhCCEEeCCCCc
Confidence 3455678899999999999999999999999999999999998776 22222223459999988875
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.5e-15 Score=138.28 Aligned_cols=72 Identities=17% Similarity=0.189 Sum_probs=58.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh--hhHHH
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE--LSVVD 328 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e--L~~~~ 328 (368)
...+++|+.++..+++++|+++++|++|||+.||++|++.+|+.+++ +.........|++++++..+ +...+
T Consensus 182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~--~n~~~~~~~~a~~v~~~~~~dGv~~~l 255 (261)
T 2rbk_A 182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM--GQAKEDVKAAADYVTAPIDEDGISKAM 255 (261)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHSSEECCCGGGTHHHHHH
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe--cCccHHHHhhCCEEeccCchhhHHHHH
Confidence 46788999999999999999999999999999999999999987655 22222222349999999998 75443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.43 E-value=3.8e-13 Score=124.15 Aligned_cols=98 Identities=8% Similarity=0.076 Sum_probs=76.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC---hHHHHHHHHHcCcc--ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP---RKTLETAIDSIGIE--EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~---~~~~~~~l~~~gl~--~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
..++||+.++|+.|++.|++++++||.+ ...+...++.+|+. .+|+.+++.++. .||.+ ...+. ..+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--~K~~~--~~~~~-~~~~-- 172 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--KGKEK--RRELV-SQTH-- 172 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--CSSHH--HHHHH-HHHE--
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--CCcHH--HHHHH-HhCC--
Confidence 5889999999999999999999999987 45667788888998 778888887754 34433 33333 2333
Q ss_pred CcEEEEcCCHhhHHHHH-------H---------cCCeEEEEcCCC
Q 043738 277 ERCIVFGNSNQTVEAAH-------D---------ARMKCVAVASKH 306 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~-------~---------aG~~~I~v~~~~ 306 (368)
..|++|||+.+|+.+|. + +|+.+|.++.+.
T Consensus 173 ~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~ 218 (258)
T 2i33_A 173 DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM 218 (258)
T ss_dssp EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence 34999999999999982 3 899999988553
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=3.9e-14 Score=130.36 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
...+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+++- +........||+++.+.++
T Consensus 189 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~--na~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 189 NVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG--NASEKVQSVADFVTDTVDN 255 (268)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT--TSCHHHHHTCSEECCCTTT
T ss_pred eeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC--CCcHHHHHhcCEeeCCCCc
Confidence 456778899999999999999999999999999999999999765552 2222233359999988765
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.41 E-value=3.3e-14 Score=131.62 Aligned_cols=103 Identities=11% Similarity=0.142 Sum_probs=75.0
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHcC--ccccccEEEeC----CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 217 HYKIPMALVSTHPRKTLETAIDSIG--IEEYFTAIVAA----EDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 217 ~~Gi~vaivSn~~~~~~~~~l~~~g--l~~~Fd~iv~~----e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
..+++++++++. ......++.++ +..+|+.+.++ +....+++|+.+++.+++++|+++++|++|||+.||++
T Consensus 144 ~~~~ki~i~~~~--~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~ 221 (271)
T 1rlm_A 144 DVLFKFSLNLPD--EQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAE 221 (271)
T ss_dssp SCEEEEEEECCG--GGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred CceEEEEEEcCH--HHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHH
Confidence 345677777765 23455555443 44567766665 33567889999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
|++.+|+.+++ ... .......|++++.+.++
T Consensus 222 m~~~ag~~va~-~na-~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 222 MLKMARYSFAM-GNA-AENIKQIARYATDDNNH 252 (271)
T ss_dssp HHHHCSEEEEC-TTC-CHHHHHHCSEECCCGGG
T ss_pred HHHHcCCeEEe-CCc-cHHHHHhCCeeCcCCCC
Confidence 99999986543 222 22222349999988875
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-14 Score=135.77 Aligned_cols=103 Identities=14% Similarity=0.181 Sum_probs=67.2
Q ss_pred CCCcEEEEcCCChHHHHHHHHHcC--ccccccEEEeCC----CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHH
Q 043738 218 YKIPMALVSTHPRKTLETAIDSIG--IEEYFTAIVAAE----DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEA 291 (368)
Q Consensus 218 ~Gi~vaivSn~~~~~~~~~l~~~g--l~~~Fd~iv~~e----~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~ 291 (368)
.++..+++++........+.+.+. +...+..++++. ....+.+|+.+++.+++++|++++++++|||+.||++|
T Consensus 161 ~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~m 240 (285)
T 3pgv_A 161 QGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEM 240 (285)
T ss_dssp SSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHH
T ss_pred CCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHH
Confidence 344455666545454444443332 222344444332 23566778999999999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCCCccccC-CCc--EEEcCchh
Q 043738 292 AHDARMKCVAVASKHPVYELG-AAD--LVVRHLDE 323 (368)
Q Consensus 292 A~~aG~~~I~v~~~~~~~~~~-~ad--~vv~sl~e 323 (368)
++.+|+.++| ++...++. .|+ +++.+.++
T Consensus 241 l~~ag~~vAm---~Na~~~vk~~A~~~~v~~sn~e 272 (285)
T 3pgv_A 241 LSMAGKGCIM---ANAHQRLKDLHPELEVIGSNAD 272 (285)
T ss_dssp HHHSSEEEEC---TTSCHHHHHHCTTSEECCCGGG
T ss_pred HHhcCCEEEc---cCCCHHHHHhCCCCEecccCCc
Confidence 9999976555 33223332 366 47777664
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=122.21 Aligned_cols=100 Identities=14% Similarity=0.027 Sum_probs=87.0
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHH---HHHHHHH--------cCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKT---LETAIDS--------IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~---~~~~l~~--------~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
.++||+.++|+.|+++|++++++||..... +...+++ +|+ +|+.++++++. ..||+|+++..++++
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~~ 264 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFWK 264 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHHH
Confidence 358999999999999999999999987543 4566777 888 59999988765 469999999999999
Q ss_pred cCCCCCc-EEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 272 LKFIPER-CIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 272 lgi~p~~-~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
++..+.+ |++|||+.+|+++|+++||.+|+|.++
T Consensus 265 ~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 265 HIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 9887655 799999999999999999999999876
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=118.69 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=51.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
..+.+|...++.+++++|++++++++|||+.||++|++.+|+.+++ ..+. ......|++++.+.++
T Consensus 149 ~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~-~n~~-~~~k~~a~~v~~~~~~ 214 (227)
T 1l6r_A 149 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-ANAT-DNIKAVSDFVSDYSYG 214 (227)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-TTSC-HHHHHHCSEECSCCTT
T ss_pred cCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEe-cCch-HHHHHhCCEEecCCCC
Confidence 3456789999999999999999999999999999999999986443 3222 2222348999988754
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.23 E-value=1e-12 Score=125.49 Aligned_cols=113 Identities=16% Similarity=0.181 Sum_probs=73.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC-C-------------------CCCCCC-
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED-V-------------------HRGKPD- 261 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~-v-------------------~~~KP~- 261 (368)
.+.+++.++|+.|++ |++++++|+.....+......+++. +.+++... . ...++.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh---hhhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 668999999999999 9999999988766666666666652 32222110 0 000111
Q ss_pred --------------HHHHH----------HHHHHcCCCCCc----EEEEcCCHhhHHHHHHc----CCeEEEEcCCCCcc
Q 043738 262 --------------PEMFV----------YAAQLLKFIPER----CIVFGNSNQTVEAAHDA----RMKCVAVASKHPVY 309 (368)
Q Consensus 262 --------------~~~~~----------~~le~lgi~p~~----~l~IGDs~nDl~~A~~a----G~~~I~v~~~~~~~ 309 (368)
+..+. ......|+++++ |++|||+.||++|++.+ |+.+++ +.. ..
T Consensus 179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~--~~ 255 (332)
T 1y8a_A 179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGN--EY 255 (332)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCC--HH
T ss_pred HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCC--HH
Confidence 11122 111112677888 99999999999999999 998666 432 22
Q ss_pred ccCCCcEEEcCch
Q 043738 310 ELGAADLVVRHLD 322 (368)
Q Consensus 310 ~~~~ad~vv~sl~ 322 (368)
....||+++.+.+
T Consensus 256 lk~~Ad~v~~~~~ 268 (332)
T 1y8a_A 256 ALKHADVVIISPT 268 (332)
T ss_dssp HHTTCSEEEECSS
T ss_pred HHhhCcEEecCCC
Confidence 2235999998744
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=3.4e-13 Score=129.84 Aligned_cols=78 Identities=14% Similarity=0.143 Sum_probs=62.3
Q ss_pred CCCCCCCHHHHHHHHHHc----------------------CC-----CCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCC
Q 043738 255 VHRGKPDPEMFVYAAQLL----------------------KF-----IPERCIVFGNSN-QTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~l----------------------gi-----~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~ 306 (368)
...+||.+.+|..+++.+ |+ +++++++|||+. +|+.+|+++||.+|+|..+.
T Consensus 242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~ 321 (352)
T 3kc2_A 242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV 321 (352)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence 347999999999987764 22 679999999999 69999999999999999543
Q ss_pred Cc-cc---cCCCcEEEcCchhhhHHHHhcc
Q 043738 307 PV-YE---LGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 307 ~~-~~---~~~ad~vv~sl~eL~~~~l~~L 332 (368)
.. .. ...+|++++++.|+...+++++
T Consensus 322 ~~~~~~~~~~~pd~vi~~l~el~~~il~~~ 351 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVNDVFDAVTKTLEKY 351 (352)
T ss_dssp CCTTCCCTTCCCSEECSSHHHHHHHHHHHH
T ss_pred CCcccccccCCCCEEECCHHHHHHHHHHhc
Confidence 22 11 2349999999999988777654
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.12 E-value=6.9e-12 Score=116.99 Aligned_cols=64 Identities=22% Similarity=0.183 Sum_probs=51.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchh
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDE 323 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~e 323 (368)
.+-.|..++..+++++|+++++|++|||+.||++|++.+|+. +++..+. .++ ..|++++.+..+
T Consensus 213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~~~~--~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGNAR--EDIKSIADAVTLTNDE 277 (288)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EECTTCC--HHHHHHCSEECCCGGG
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcE-EEEcCCC--HHHHhhCceeecCCCc
Confidence 445678899999999999999999999999999999999985 4443322 222 238999988765
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=3.3e-11 Score=110.48 Aligned_cols=63 Identities=6% Similarity=-0.065 Sum_probs=51.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCC--CcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIP--ERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p--~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
... ++|+.+++.+++++|+++ ++|++|||+.||++|++.+|+.+++-+... + .+++++.+..+
T Consensus 172 ~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~----~-~~~~~~~~~~~ 236 (259)
T 3zx4_A 172 AKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP----P-EGVLATPAPGP 236 (259)
T ss_dssp ESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC----C-TTCEECSSCHH
T ss_pred cCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh----c-CCcEEeCCCCc
Confidence 445 788999999999999999 999999999999999999998755533322 3 57888877653
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.05 E-value=6.5e-11 Score=109.23 Aligned_cols=66 Identities=14% Similarity=0.303 Sum_probs=52.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~e 323 (368)
...+.+|+.++..+++++|+++++|++|||+.||++|++.+|+.+++ . +...++ ..|++++.+.++
T Consensus 185 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~--n~~~~~~~~a~~v~~~~~~ 251 (268)
T 1nf2_A 185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-E--NAIEKVKEASDIVTLTNND 251 (268)
T ss_dssp ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-T--TSCHHHHHHCSEECCCTTT
T ss_pred eCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-c--CCCHHHHhhCCEEEccCCc
Confidence 35567789999999999999999999999999999999999986544 2 222222 238999988664
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.05 E-value=8.8e-12 Score=116.06 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=52.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
...+-+|+.++..+++++|++++++++|||+.||++|++.+|+.+ ++..+. ......|++++.+.++
T Consensus 193 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~v-a~~n~~-~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 193 LDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGV-AVDNAI-PSVKEVANFVTKSNLE 259 (282)
T ss_dssp EETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTTSC-HHHHHHCSEECCCTTT
T ss_pred cCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEE-EecCCc-HHHHhhCCEEecCCCc
Confidence 345667899999999999999999999999999999999999853 333222 2112248999988765
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.00 E-value=3.5e-10 Score=103.83 Aligned_cols=85 Identities=13% Similarity=0.162 Sum_probs=63.6
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCCh----HHHHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPR----KTLETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~----~~~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
..+++||+.++|+.|++.|++++++||.+. ..+...|+.+|+..+++ .++...+ ++........+...|.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~gy- 173 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDMGY- 173 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTTTC-
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC----CCChHHHHHHHHhcCC-
Confidence 368999999999999999999999999854 48888999999988774 3443322 1222344444444443
Q ss_pred CCcEEEEcCCHhhHHH
Q 043738 276 PERCIVFGNSNQTVEA 291 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~ 291 (368)
.-+++|||+.+|+.+
T Consensus 174 -~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 174 -DIVLFVGDNLNDFGD 188 (260)
T ss_dssp -EEEEEEESSGGGGCG
T ss_pred -CEEEEECCChHHcCc
Confidence 449999999999987
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.00 E-value=3.4e-10 Score=106.06 Aligned_cols=132 Identities=17% Similarity=0.127 Sum_probs=81.9
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeC-----CC---------C--CCCCCCHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAA-----ED---------V--HRGKPDPEM 264 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~-----e~---------v--~~~KP~~~~ 264 (368)
...+.||+.++++.|+++|++++++|++....++..++.+|+......+++. ++ . ...|+.+..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHHH
Confidence 3689999999999999999999999999999999999999976432223221 10 1 112222221
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeE----EEEcCCCCccc----cCCCcEEE--cCchhhhHHHHhcc
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC----VAVASKHPVYE----LGAADLVV--RHLDELSVVDLKNL 332 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~----I~v~~~~~~~~----~~~ad~vv--~sl~eL~~~~l~~L 332 (368)
-......+.-...+++++|||.||+.|++.+...- +++.+.+.... ...+|.|+ +++.++...+++.+
T Consensus 219 k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il~~i 296 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSILQKT 296 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHHHHH
T ss_pred HHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHHHhh
Confidence 11222334445678999999999999977432221 22222221100 12478877 34556665555543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=98.99 E-value=4.5e-10 Score=103.18 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=64.8
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCCh----HHHHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPR----KTLETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~----~~~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
...++||+.++|+.|++.|++++++||.+. ..+...|+++|+..+++ .++.... ...|...+..+.+. |.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~---~~~K~~~r~~l~~~-Gy- 173 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD---KSAKAARFAEIEKQ-GY- 173 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS---CSCCHHHHHHHHHT-TE-
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC---CCChHHHHHHHHhc-CC-
Confidence 368999999999999999999999999754 58888999999987773 4444332 13345555555554 43
Q ss_pred CCcEEEEcCCHhhHHH
Q 043738 276 PERCIVFGNSNQTVEA 291 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~ 291 (368)
..+++|||..+|+.+
T Consensus 174 -~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 174 -EIVLYVGDNLDDFGN 188 (262)
T ss_dssp -EEEEEEESSGGGGCS
T ss_pred -CEEEEECCChHHhcc
Confidence 349999999999987
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.94 E-value=4.2e-11 Score=105.82 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=88.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
+.++||+.+||+.+++. ++++|+|++...+++.+++.++...+|+.+++.++....| ..|...++.+|.++++||+
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~vi 142 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKVII 142 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGEEE
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHEEE
Confidence 57899999999999998 9999999999999999999999999999999988776554 5688889999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEc
Q 043738 282 FGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
|||+.+++.++.++|+.++...
T Consensus 143 vDDs~~~~~~~~~ngi~i~~~~ 164 (195)
T 2hhl_A 143 VDNSPASYIFHPENAVPVQSWF 164 (195)
T ss_dssp EESCGGGGTTCGGGEEECCCCS
T ss_pred EECCHHHhhhCccCccEEeeec
Confidence 9999999999999998765433
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.94 E-value=6.9e-10 Score=104.39 Aligned_cols=66 Identities=14% Similarity=0.175 Sum_probs=51.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc-Cchh
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR-HLDE 323 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~-sl~e 323 (368)
..+-+|..++..+++++|+++++|++|||+.||++|++.+|+.++ +.++.. .....|++++. +..+
T Consensus 220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~na~~-~~k~~a~~v~~~~~~~ 286 (301)
T 2b30_A 220 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VANATD-SAKSHAKCVLPVSHRE 286 (301)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTTCCH-HHHHHSSEECSSCTTT
T ss_pred CCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-EcCCcH-HHHhhCCEEEccCCCC
Confidence 456678999999999999999999999999999999999998644 332221 11224899998 7654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.4e-08 Score=97.13 Aligned_cols=93 Identities=9% Similarity=-0.029 Sum_probs=65.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cEEEe------------CCC-----CCCCCCCHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TAIVA------------AED-----VHRGKPDPE 263 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~iv~------------~e~-----v~~~KP~~~ 263 (368)
+++|+++++++.|+++|++++|||+++...++.+.+.+|+..-+ +.|++ +.. +..+.-|+.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~~ 300 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKVQ 300 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchHH
Confidence 47999999999999999999999999999999999998764322 22332 111 111112344
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcC
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDAR 296 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG 296 (368)
.++..++. ++....++++|||.+|++|+++.+
T Consensus 301 ~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 301 TINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp HHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred HHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence 44444322 344566899999999999999853
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.80 E-value=2.7e-10 Score=99.38 Aligned_cols=94 Identities=16% Similarity=0.093 Sum_probs=85.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
+.++||+.+||+.+++. +.++|+|++...+++.+++.++...+|+.+++.++....| ..|...++.+|.++++|++
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~vi 129 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRVLI 129 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGEEE
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceEEE
Confidence 57899999999999998 9999999999999999999999999999999988765433 4577888899999999999
Q ss_pred EcCCHhhHHHHHHcCCeE
Q 043738 282 FGNSNQTVEAAHDARMKC 299 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~ 299 (368)
|||+..++.++.++|+.+
T Consensus 130 vdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 130 LDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp ECSCGGGGTTCTTSBCCC
T ss_pred EeCCHHHhccCcCCEeEe
Confidence 999999999999999874
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.5e-07 Score=97.54 Aligned_cols=112 Identities=13% Similarity=0.176 Sum_probs=84.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++.|++.+.++.|++.|++++++|+.+...+....+.+|+..+|..+ . +..|.+.++. ++-. +++++|
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~-----~--P~~K~~~v~~----l~~~-~~v~~v 524 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV-----L--PHQKSEEVKK----LQAK-EVVAFV 524 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSC-----C--TTCHHHHHHH----HTTT-CCEEEE
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeC-----C--HHhHHHHHHH----HhhC-CeEEEE
Confidence 68899999999999999999999999999999999999987544322 1 2233444444 4333 889999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||+.|++.+|++..+- .........||+++ ++++.+...+
T Consensus 525 GDg~ND~~al~~A~vgiamg--~g~~~a~~~AD~vl~~~~~~~i~~~i 570 (645)
T 3j08_A 525 GDGINDAPALAQADLGIAVG--SGSDVAVESGDIVLIRDDLRDVVAAI 570 (645)
T ss_dssp ECSSSCHHHHHHSSEEEEEC--CCSCCSSCCSSSEESSCCTTHHHHHH
T ss_pred eCCHhHHHHHHhCCEEEEeC--CCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999999999999765442 22233334699999 7777776544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.40 E-value=5.5e-07 Score=94.44 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=83.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
++.|++.+.++.|++.|++++++|+.+...+....+.+|+..+|.. .. +..|.+.++.+ +-. +.+++|
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~-----~~--P~~K~~~v~~l----~~~-~~v~~v 602 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAE-----VL--PHQKSEEVKKL----QAK-EVVAFV 602 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECS-----CC--TTCHHHHHHHH----TTT-CCEEEE
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEcc-----CC--HHHHHHHHHHH----hcC-CeEEEE
Confidence 6889999999999999999999999999999999999998743322 22 22334444443 333 889999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
||+.||+.|.+.+|++..+- .........||+++ +++..+...+
T Consensus 603 GDg~ND~~al~~A~vgiamg--~g~~~a~~~AD~vl~~~~~~~i~~~i 648 (723)
T 3j09_A 603 GDGINDAPALAQADLGIAVG--SGSDVAVESGDIVLIRDDLRDVVAAI 648 (723)
T ss_dssp ECSSTTHHHHHHSSEEEECC--CCSCCSSCCSSEECSSCCTTHHHHHH
T ss_pred ECChhhHHHHhhCCEEEEeC--CCcHHHHHhCCEEEeCCCHHHHHHHH
Confidence 99999999999999654432 22223334599999 6777776544
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=5.2e-07 Score=90.12 Aligned_cols=99 Identities=11% Similarity=0.077 Sum_probs=82.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-C-------------ccccccEEEeCCCCCCCCCCH-----
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI-G-------------IEEYFTAIVAAEDVHRGKPDP----- 262 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~-g-------------l~~~Fd~iv~~e~v~~~KP~~----- 262 (368)
+...|.+..+|+.|++.| ++.++||+....+...++.+ | +.++||.||... .||..
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A----~KP~FF~~~~ 319 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDA----RKPLFFGEGT 319 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESC----CTTGGGTTCC
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeC----CCCCcccCCC
Confidence 456788999999999999 99999999999999999876 6 568899976643 12221
Q ss_pred ------------------------HH-----HHHHHHHcCCCCCcEEEEcCCH-hhHHHHH-HcCCeEEEEcCC
Q 043738 263 ------------------------EM-----FVYAAQLLKFIPERCIVFGNSN-QTVEAAH-DARMKCVAVASK 305 (368)
Q Consensus 263 ------------------------~~-----~~~~le~lgi~p~~~l~IGDs~-nDl~~A~-~aG~~~I~v~~~ 305 (368)
.+ +..+++.+|+..+++++|||.. .||-.++ .+|+.+++|-..
T Consensus 320 pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 320 VLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp CEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred cceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 11 5889999999999999999999 8998887 899999998743
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=9.3e-07 Score=92.66 Aligned_cols=113 Identities=15% Similarity=0.153 Sum_probs=83.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
.++.+++.+.++.|++.|++++++|+.+...+....+.+|+..++..+ .|+-...+.+.++-....+++
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~-----------~P~~K~~~v~~l~~~g~~V~~ 621 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEI-----------MPEDKSRIVSELKDKGLIVAM 621 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSC-----------CHHHHHHHHHHHHHHSCCEEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEec-----------CHHHHHHHHHHHHhcCCEEEE
Confidence 367899999999999999999999999999999999999987543221 233334444444444678999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVV 327 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~ 327 (368)
|||+.||+.|.+.+|++..+- .........||+++ ++++.+...
T Consensus 622 vGDG~ND~paL~~AdvGIAmg--~g~d~a~~~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 622 AGDGVNDAPALAKADIGIAMG--TGTDVAIESAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp EECSSTTHHHHHHSSEEEEES--SSCSHHHHHCSEEECSCCSTTHHHH
T ss_pred EECChHhHHHHHhCCEEEEeC--CccHHHHHhCCEEEccCCHHHHHHH
Confidence 999999999999999765552 22223334599999 556666543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=3.5e-06 Score=79.93 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=35.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~ 240 (368)
.++|+++++++.|+++|+.++|+|.++...++.+...+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 68999999999999999999999999999999988864
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.24 E-value=1.2e-06 Score=95.12 Aligned_cols=123 Identities=12% Similarity=0.097 Sum_probs=85.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc----EEEeCCCCC------------------CCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT----AIVAAEDVH------------------RGK 259 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd----~iv~~e~v~------------------~~K 259 (368)
.++.|++.+.++.|++.|++++++|+.....+....+.+|+....+ .++++++.. +-.
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~ 681 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 681 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeC
Confidence 3788999999999999999999999999999999999999865432 233332111 111
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhHHH
Q 043738 260 PDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSVVD 328 (368)
Q Consensus 260 P~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~~~ 328 (368)
|. -...+.+.++-..+.++++||+.||+.|.++|+++..+ +.........||+++ +++..+...+
T Consensus 682 P~--~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam--g~g~~~ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 682 PS--HKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM--GSGTAVAKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp SS--HHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE--TTSCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred HH--HHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe--CCCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 22 22233333333347899999999999999999987665 222222234599999 4577776543
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.04 E-value=4e-07 Score=80.54 Aligned_cols=93 Identities=10% Similarity=0.087 Sum_probs=74.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcc-ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIE-EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~-~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+...||+.+||+.+. +++.++|.|.+...++..+++.++.. .+|+.++..+...... ..|...++.+|.++++||
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~---g~y~KdL~~Lgrdl~~vI 133 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKD---GVHIKDLSKLNRDLSKVI 133 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEET---TEEECCGGGSCSCGGGEE
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEEC---CeeeecHHHhCCChHHEE
Confidence 588999999999998 56999999999999999999999986 5888877765432111 125566778899999999
Q ss_pred EEcCCHhhHHHHHHcCCe
Q 043738 281 VFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~ 298 (368)
+|+|+.+...+....|+.
T Consensus 134 iIDDsp~~~~~~p~N~I~ 151 (204)
T 3qle_A 134 IIDTDPNSYKLQPENAIP 151 (204)
T ss_dssp EEESCTTTTTTCGGGEEE
T ss_pred EEECCHHHHhhCccCceE
Confidence 999999887665555643
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.03 E-value=2.8e-07 Score=88.90 Aligned_cols=93 Identities=10% Similarity=0.144 Sum_probs=70.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-ccc-EEEeCCCCCCCCCCHHHHHHHHHHc-CCCCCc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-YFT-AIVAAEDVHRGKPDPEMFVYAAQLL-KFIPER 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd-~iv~~e~v~~~KP~~~~~~~~le~l-gi~p~~ 278 (368)
+.+.||+.+||+.+. .++.++|.|.+...++..+++.++... +|+ .+++.++.+. .+..-++.+ |.++++
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~------~~~KdL~~L~~~dl~~ 146 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS------LAQKSLRRLFPCDTSM 146 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSC------SSCCCGGGTCSSCCTT
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCC------cceecHHHhcCCCCce
Confidence 688999999999999 569999999999999999999999887 787 6776655432 123335544 899999
Q ss_pred EEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 279 CIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
||+|+|+..-...- . ..|.|...
T Consensus 147 viiiDd~~~~~~~~---p-N~I~i~~~ 169 (372)
T 3ef0_A 147 VVVIDDRGDVWDWN---P-NLIKVVPY 169 (372)
T ss_dssp EEEEESCSGGGTTC---T-TEEECCCC
T ss_pred EEEEeCCHHHcCCC---C-cEeeeCCc
Confidence 99999998644322 2 55666633
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.4e-05 Score=86.83 Aligned_cols=123 Identities=14% Similarity=0.108 Sum_probs=80.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc------------------------ccEEEeCCCC---
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY------------------------FTAIVAAEDV--- 255 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~------------------------Fd~iv~~e~v--- 255 (368)
++.|++.+.++.|++.|++++++|+.....+....+.+|+... +..++.+++.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 6789999999999999999999999999999999999988621 0122222110
Q ss_pred ---------------CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC
Q 043738 256 ---------------HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 256 ---------------~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
......|+-...+.+.+.-....++++||+.||+.|.+.|++++.+ ...........||+++.+
T Consensus 679 ~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm-g~~gtd~ak~aAD~Vl~~ 757 (1028)
T 2zxe_A 679 STEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GISGSDVSKQAADMILLD 757 (1028)
T ss_dssp CHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-SSSCCHHHHHHCSEEETT
T ss_pred CHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe-CCccCHHHHHhcCEEecC
Confidence 0111223332322222222236799999999999999999987665 211222222358999854
Q ss_pred --chhhhH
Q 043738 321 --LDELSV 326 (368)
Q Consensus 321 --l~eL~~ 326 (368)
+..+..
T Consensus 758 ~~~~~I~~ 765 (1028)
T 2zxe_A 758 DNFASIVT 765 (1028)
T ss_dssp CCTHHHHH
T ss_pred CCHHHHHH
Confidence 555543
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.88 E-value=4e-05 Score=83.46 Aligned_cols=120 Identities=13% Similarity=0.071 Sum_probs=78.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc------------------------cEEEeCCCCC-
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF------------------------TAIVAAEDVH- 256 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F------------------------d~iv~~e~v~- 256 (368)
.++.+++.+.++.|++.|++++++|+.+...+....+.+|+...- ..++.+.+..
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 682 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKD 682 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhh
Confidence 378899999999999999999999999999999999999874210 1122221100
Q ss_pred -----------------CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc
Q 043738 257 -----------------RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR 319 (368)
Q Consensus 257 -----------------~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~ 319 (368)
...-.|+-...+.+.+.-....++++||+.||+.|.+.||+++.+-. .........||+++.
T Consensus 683 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~-ng~d~aK~aAD~Vl~ 761 (1034)
T 3ixz_A 683 MDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI-AGSDAAKNAADMILL 761 (1034)
T ss_pred CCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCC-ccCHHHHHhcCEEec
Confidence 01111222222223222223569999999999999999998766521 222222335999996
Q ss_pred Cch
Q 043738 320 HLD 322 (368)
Q Consensus 320 sl~ 322 (368)
+.+
T Consensus 762 ~~~ 764 (1034)
T 3ixz_A 762 DDN 764 (1034)
T ss_pred cCC
Confidence 644
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=1.3e-05 Score=72.40 Aligned_cols=66 Identities=14% Similarity=0.144 Sum_probs=52.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCC--------CcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGA--------ADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~--------ad~vv~sl~e 323 (368)
...+-+|+..+..+++++|++++++++|||+.||++|++.+|+.+++ . +...++.. |++++.+..+
T Consensus 157 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~-~--na~~~~k~~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 157 LPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV-R--NAQPELLHWYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC-T--TCCHHHHHHHHHHCCTTEEECSSCHH
T ss_pred ccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE-c--CCcHHHHHHHhcccccceeecCCcch
Confidence 34567889999999999999999999999999999999999986444 2 22223322 7899987764
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.70 E-value=4.8e-05 Score=81.46 Aligned_cols=117 Identities=10% Similarity=0.045 Sum_probs=79.0
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-c---EEEeCC----------------CCCCCCCC-
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-T---AIVAAE----------------DVHRGKPD- 261 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d---~iv~~e----------------~v~~~KP~- 261 (368)
++.|++.+.++.|++.|++++++|+..........+.+|+.... + .+++++ ....-.|.
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 68899999999999999999999999999999999999986311 1 000000 01112222
Q ss_pred -HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhh
Q 043738 262 -PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELS 325 (368)
Q Consensus 262 -~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~ 325 (368)
..+++ .+++.| +.++++||+.||..|.++|+++..+ ++........||+++ +++..+.
T Consensus 615 K~~iV~-~Lq~~g---~~Vam~GDGvNDapaLk~AdvGIAm--g~gtd~ak~aADiVl~~~~~~~I~ 675 (920)
T 1mhs_A 615 KYNVVE-ILQQRG---YLVAMTGDGVNDAPSLKKADTGIAV--EGSSDAARSAADIVFLAPGLGAII 675 (920)
T ss_dssp HHHHHH-HHHTTT---CCCEECCCCGGGHHHHHHSSEEEEE--TTSCHHHHHSSSEEESSCCSHHHH
T ss_pred HHHHHH-HHHhCC---CeEEEEcCCcccHHHHHhCCcCccc--ccccHHHHHhcCeEEcCCCHHHHH
Confidence 22333 333333 7899999999999999999987665 222222234589988 4454443
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.68 E-value=7.8e-06 Score=74.12 Aligned_cols=64 Identities=6% Similarity=-0.095 Sum_probs=47.9
Q ss_pred CCCCHHHHHHHHHHcCC-CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCch
Q 043738 258 GKPDPEMFVYAAQLLKF-IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi-~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
+-.|..+++.+++++|+ +++++++|||+.||++|++.+|+.+++ ..+........|++++++..
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~-gna~~~~~~~~a~~v~~~~~ 241 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKHKKAQNVSSIIDVLEV 241 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCCTTEEEESSHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe-CCCCccccchhceEEecccc
Confidence 55678999999999998 999999999999999999999987554 32221111123677665544
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00019 Score=59.52 Aligned_cols=41 Identities=17% Similarity=0.049 Sum_probs=31.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCCh---HHHHHHHHHcCcc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPR---KTLETAIDSIGIE 243 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~---~~~~~~l~~~gl~ 243 (368)
.+.|++.+.|+.++++|+.++++|+.+. ..+...++.+|+.
T Consensus 24 ~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 24 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 3457899999999999999999999874 3445556666764
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.50 E-value=3.4e-05 Score=71.00 Aligned_cols=66 Identities=9% Similarity=0.037 Sum_probs=42.4
Q ss_pred CCCCCCHHHHHHHHHHcC-CCCCc--EEEEcCCHhhHHHHHHcCCeEEEEcCCC-CccccC---CCc-EEEcCch
Q 043738 256 HRGKPDPEMFVYAAQLLK-FIPER--CIVFGNSNQTVEAAHDARMKCVAVASKH-PVYELG---AAD-LVVRHLD 322 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lg-i~p~~--~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~~---~ad-~vv~sl~ 322 (368)
..+.+|..++..+++++| +++++ +++|||+.||++|++.+|+. |++..+. ...++. .|+ +++.+.+
T Consensus 185 ~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~ 258 (275)
T 1xvi_A 185 DASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREG 258 (275)
T ss_dssp ETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC---------------------
T ss_pred cCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCC
Confidence 456678999999999999 99999 99999999999999999986 4443332 223332 268 8887655
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.38 E-value=4e-05 Score=81.90 Aligned_cols=123 Identities=12% Similarity=0.093 Sum_probs=78.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc-c-cEEEeCCCC-----------------CCCCCCHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY-F-TAIVAAEDV-----------------HRGKPDPE 263 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~-F-d~iv~~e~v-----------------~~~KP~~~ 263 (368)
++.|++.+.++.|++.|++++++|+..........+++|+... + +.++.+.+. ....-.|+
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~ 567 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPE 567 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHH
Confidence 6789999999999999999999999999999999999998531 1 111111100 01111222
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEc--CchhhhHH
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVR--HLDELSVV 327 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~--sl~eL~~~ 327 (368)
--..+.+.+.-.-+.+.++||+.||..|.++|+++..+ +.........||+++. ++..+...
T Consensus 568 ~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm--g~gtd~ak~aADivl~~~~~~~I~~a 631 (885)
T 3b8c_A 568 HKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV--ADATDAARGASDIVLTEPGLSVIISA 631 (885)
T ss_dssp HHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC--SSSHHHHGGGCSSCCSSCSHHHHTHH
T ss_pred HHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe--CCccHHHHHhcceeeccCchhHHHHH
Confidence 22222222222236799999999999999999987555 2222222234888874 35555433
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00023 Score=64.44 Aligned_cols=29 Identities=3% Similarity=-0.107 Sum_probs=22.7
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHH
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETA 236 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~ 236 (368)
..+.|++++++|++++++|+.+...+...
T Consensus 26 ~~~~l~~l~~~g~~~~iaTGR~~~~~~~~ 54 (246)
T 3f9r_A 26 MRALIKRARGAGFCVGTVGGSDFAKQVEQ 54 (246)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECCCCHHHHHHH
Confidence 44568999999999999999987754333
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00043 Score=63.50 Aligned_cols=37 Identities=14% Similarity=0.310 Sum_probs=32.7
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
..+.|+.++++|++++++|+.+...+...++.+++..
T Consensus 31 ~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 31 AAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp THHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4578889999999999999999999999999988764
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0016 Score=64.16 Aligned_cols=104 Identities=8% Similarity=0.037 Sum_probs=79.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-c--------CccccccEEEeCCC-----------------C
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS-I--------GIEEYFTAIVAAED-----------------V 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~--------gl~~~Fd~iv~~e~-----------------v 255 (368)
+...|.+..+|+.|++.|.++.++||++-.++...+.. + .+.++||.||+... .
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence 35568899999999999999999999999999888875 3 47789999887531 0
Q ss_pred C-------CCCCC---HHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHH-cCCeEEEEcCC
Q 043738 256 H-------RGKPD---PEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHD-ARMKCVAVASK 305 (368)
Q Consensus 256 ~-------~~KP~---~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~-aG~~~I~v~~~ 305 (368)
+ ..++. .--...+.+.+|..-.+|++|||+. .||-.++. .|+.+++|-..
T Consensus 265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 0 00110 1114567778899999999999999 89766665 79999998743
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00023 Score=57.63 Aligned_cols=29 Identities=7% Similarity=0.035 Sum_probs=24.6
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRK 231 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~ 231 (368)
.+.++..+.++.++++|++++++||.+..
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 45677889999999999999999998643
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.01 E-value=8e-05 Score=70.28 Aligned_cols=94 Identities=10% Similarity=0.133 Sum_probs=65.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc--cE-EE-eCCC-CC-CCCCCHHHHHHHHHHc----
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF--TA-IV-AAED-VH-RGKPDPEMFVYAAQLL---- 272 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F--d~-iv-~~e~-v~-~~KP~~~~~~~~le~l---- 272 (368)
...||+.+||+.+.+. +.++|.|.+...++..+++.++....+ .. .+ ..+. +. ..+.+...|..-++.+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~ 242 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALY 242 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHC
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhccc
Confidence 5679999999999965 999999999999999999999876553 21 22 1111 10 0011111234445555
Q ss_pred -CCCCCcEEEEcCCHhhHHHHHHcCC
Q 043738 273 -KFIPERCIVFGNSNQTVEAAHDARM 297 (368)
Q Consensus 273 -gi~p~~~l~IGDs~nDl~~A~~aG~ 297 (368)
|.+++++|.|+|+..-..+.-..|+
T Consensus 243 p~rdl~~tIiIDdsp~~~~~~p~NgI 268 (320)
T 3shq_A 243 KQYNSSNTIMFDDIRRNFLMNPKSGL 268 (320)
T ss_dssp TTCCGGGEEEEESCGGGGTTSGGGEE
T ss_pred CCCChhHEEEEeCChHHhccCcCceE
Confidence 8899999999999987766666664
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00098 Score=59.77 Aligned_cols=54 Identities=11% Similarity=0.002 Sum_probs=44.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc--CCeEEEEcCCCCccccCCCcEEEcC
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA--RMKCVAVASKHPVYELGAADLVVRH 320 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a--G~~~I~v~~~~~~~~~~~ad~vv~s 320 (368)
..+--|..+++.+++++| +++|||+.||++|.+.+ |..+++-+. ...|++++.+
T Consensus 156 ~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~Na------~~~A~~v~~~ 211 (239)
T 1u02_A 156 VPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGEG------ETHAKFHVAD 211 (239)
T ss_dssp CTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESSS------CCCCSEEESS
T ss_pred cCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECCC------CCcceEEeCC
Confidence 445567999999999998 99999999999999999 987666333 2358999988
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0037 Score=56.24 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=29.9
Q ss_pred HHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc
Q 043738 210 EFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE 244 (368)
Q Consensus 210 elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~ 244 (368)
+.|+.++++|++++++|+.+...+...++.+++..
T Consensus 24 ~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~ 58 (249)
T 2zos_A 24 PIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (249)
T ss_dssp HHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCc
Confidence 46777889999999999999998888888888753
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.00034 Score=63.68 Aligned_cols=62 Identities=15% Similarity=0.080 Sum_probs=43.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCch
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGN----SNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLD 322 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGD----s~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~ 322 (368)
..+-.|..+++.+ +|++++++++||| +.||++|.+.+|+..+++. +....+ ..|++++++.+
T Consensus 193 ~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~--NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 193 PEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV--SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp ETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS--SHHHHHHHHHHHHCTTC-
T ss_pred cCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec--CCCHHHHHhhheeCCCCc
Confidence 3455567888888 8999999999999 9999999999997555553 222222 22566655543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0057 Score=54.67 Aligned_cols=36 Identities=8% Similarity=0.028 Sum_probs=28.5
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~ 240 (368)
+.+...+.|++|+++| +++++|+.+...+...++.+
T Consensus 24 i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 24 ADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp CCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred CCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence 3455678899999999 99999999887777766544
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=94.80 E-value=0.24 Score=44.34 Aligned_cols=91 Identities=15% Similarity=0.145 Sum_probs=66.9
Q ss_pred HHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHcCcccccc--EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCC
Q 043738 209 KEFVNILMHY-KIPMALVSTHPRKTLETAIDSIGIEEYFT--AIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS 285 (368)
Q Consensus 209 ~elL~~Lk~~-Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd--~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs 285 (368)
..+|..+.+. ...-++||++.-.-.-..+=-+|+..+|. .|+++-.++ |...|+++.+++| +...-++|||+
T Consensus 165 ~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~kiG----KesCFerI~~RFG-~k~~yvvIGDG 239 (274)
T 3geb_A 165 LKALNLINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKTG----KESCFERIMQRFG-RKAVYVVIGDG 239 (274)
T ss_dssp HHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTTC----HHHHHHHHHHHHC-TTSEEEEEESS
T ss_pred HHHHHhhccCCceeEEEEecCchHHHHHHHHHhhcccceecccccchhhcC----HHHHHHHHHHHhC-CCceEEEECCC
Confidence 3344444443 34457788875443333444568888874 799987764 4899999999998 55788999999
Q ss_pred HhhHHHHHHcCCeEEEEcC
Q 043738 286 NQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 286 ~nDl~~A~~aG~~~I~v~~ 304 (368)
.---++|+..+++++-|..
T Consensus 240 ~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 240 VEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp HHHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHHHcCCCeEEeec
Confidence 9999999999999887663
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=94.36 E-value=0.019 Score=51.24 Aligned_cols=45 Identities=16% Similarity=0.042 Sum_probs=33.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcC----CHhhHHHHHHcCCeEEEEc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGN----SNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGD----s~nDl~~A~~aG~~~I~v~ 303 (368)
..+-.|..+++.+ +|++++++++||| +.||++|.+.+|...+.+.
T Consensus 184 ~~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~ 232 (246)
T 2amy_A 184 PDGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT 232 (246)
T ss_dssp ETTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS
T ss_pred cCCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee
Confidence 3444556777777 8999999999999 9999999999986444443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=93.75 E-value=0.012 Score=52.44 Aligned_cols=25 Identities=16% Similarity=0.262 Sum_probs=19.0
Q ss_pred CceEEEEeccCccccCcchHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAW 141 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~ 141 (368)
++|+|+||+||||+++...+.....
T Consensus 5 ~~kli~~DlDGTLl~~~~~i~~~~~ 29 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPRQKITKEMD 29 (246)
T ss_dssp CSEEEEEESBTTTBCTTSCCCHHHH
T ss_pred CceEEEEECCCCcCCCCcccCHHHH
Confidence 4799999999999987655544433
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=93.60 E-value=0.2 Score=47.52 Aligned_cols=86 Identities=14% Similarity=0.202 Sum_probs=61.8
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCCh---HHHHHHHH-HcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPR---KTLETAID-SIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~---~~~~~~l~-~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
.+.||+.++|+.|++.|++++++||+.. ......+. .+|+.-..+.|+++...... + ++ ....
T Consensus 29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~------~---~~----~~~~ 95 (352)
T 3kc2_A 29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKS------L---VN----KYSR 95 (352)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGG------G---TT----TCSE
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHH------H---Hh----cCCE
Confidence 5679999999999999999999999753 33334444 68988777888887542110 1 11 2367
Q ss_pred EEEEcCCHhhHHHHHHcCCeEEEE
Q 043738 279 CIVFGNSNQTVEAAHDARMKCVAV 302 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~~~I~v 302 (368)
+++||-. .-.+.++++|+..+..
T Consensus 96 v~viG~~-~l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 96 ILAVGTP-SVRGVAEGYGFQDVVH 118 (352)
T ss_dssp EEEESST-THHHHHHHHTCSEEEE
T ss_pred EEEECCH-HHHHHHHhCCCeEecc
Confidence 8888865 5577888999998753
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=93.41 E-value=0.032 Score=50.31 Aligned_cols=24 Identities=8% Similarity=0.327 Sum_probs=18.1
Q ss_pred CceEEEEeccCccccCcchHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQA 140 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a 140 (368)
++|+|+||+||||++....+....
T Consensus 12 ~~kli~~DlDGTLl~~~~~is~~~ 35 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQKIDPEV 35 (262)
T ss_dssp -CEEEEEESBTTTBSTTSCCCHHH
T ss_pred CeEEEEEeCccCCCCCCCcCCHHH
Confidence 479999999999998765554443
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=92.21 E-value=0.41 Score=42.73 Aligned_cols=84 Identities=19% Similarity=0.242 Sum_probs=56.7
Q ss_pred cCccHHHHHHHHHhCCCcEEEEcCCChHHHH---HHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEE
Q 043738 204 LRTGSKEFVNILMHYKIPMALVSTHPRKTLE---TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCI 280 (368)
Q Consensus 204 ~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~---~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l 280 (368)
+.+++.++|+.+++.|++++++||....... ..+..+|+....+.++++. ......+++.. ...+++
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~---------~~~~~~l~~~~-~~~~v~ 87 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSG---------LATRLYMSKHL-DPGKIF 87 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHH---------HHHHHHHHHHS-CCCCEE
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecH---------HHHHHHHHHhC-CCCEEE
Confidence 3478999999999999999999998654444 3444568775566777653 22333344332 346788
Q ss_pred EEcCCHhhHHHHHHcCCe
Q 043738 281 VFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 281 ~IGDs~nDl~~A~~aG~~ 298 (368)
++|+. .....+++.|+.
T Consensus 88 viG~~-~l~~~l~~~G~~ 104 (263)
T 1zjj_A 88 VIGGE-GLVKEMQALGWG 104 (263)
T ss_dssp EESCH-HHHHHHHHHTSC
T ss_pred EEcCH-HHHHHHHHcCCe
Confidence 88874 556677777764
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=92.14 E-value=0.075 Score=51.90 Aligned_cols=93 Identities=9% Similarity=0.129 Sum_probs=68.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccc-cccE-EEeCCCCCCCCCCHHHHHHHHHH-cCCCCCc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEE-YFTA-IVAAEDVHRGKPDPEMFVYAAQL-LKFIPER 278 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~-~Fd~-iv~~e~v~~~KP~~~~~~~~le~-lgi~p~~ 278 (368)
+...||+.+||+.+.. .+.++|.|.+...++..+++.++-.. +|.. +++.++.+.. +..-+.. +|.+.+.
T Consensus 82 V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~------~~KdL~~ll~rdl~~ 154 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDTSM 154 (442)
T ss_dssp EEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCS------SCCCGGGTCSSCCTT
T ss_pred EEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCc------eeeehHHhcCCCcce
Confidence 5889999999999985 59999999999999999999998776 7865 6655543321 1112333 4889999
Q ss_pred EEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 279 CIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 279 ~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
+|.|+|+..-.. .+ . ..|.|...
T Consensus 155 vvIIDd~p~~~~-~~--p-N~I~I~~~ 177 (442)
T 3ef1_A 155 VVVIDDRGDVWD-WN--P-NLIKVVPY 177 (442)
T ss_dssp EEEEESCSGGGT-TC--T-TEEECCCC
T ss_pred EEEEECCHHHhC-CC--C-CEEEcCCc
Confidence 999999985332 22 3 56777644
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=91.86 E-value=0.33 Score=43.82 Aligned_cols=84 Identities=13% Similarity=0.124 Sum_probs=58.7
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcC---CChHHHHHHHHHcCcc-ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCc
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVST---HPRKTLETAIDSIGIE-EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPER 278 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn---~~~~~~~~~l~~~gl~-~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~ 278 (368)
.+++++.+.|+.+++.|++++++|| .....+...++.+|+. ..++.++++.. .....+.+ +.+. +
T Consensus 30 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~~~~---------~~~~~l~~-~~~~-~ 98 (284)
T 2hx1_A 30 GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIISSGM---------ITKEYIDL-KVDG-G 98 (284)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEEHHH---------HHHHHHHH-HCCS-E
T ss_pred eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEcHHH---------HHHHHHHh-hcCC-c
Confidence 3468899999999999999999998 4566777888899988 77777777632 22222222 2223 7
Q ss_pred EE-EEcCCHhhHHHHHHcCCe
Q 043738 279 CI-VFGNSNQTVEAAHDARMK 298 (368)
Q Consensus 279 ~l-~IGDs~nDl~~A~~aG~~ 298 (368)
++ ++|.. .....+...|+.
T Consensus 99 v~~~lg~~-~l~~~l~~~G~~ 118 (284)
T 2hx1_A 99 IVAYLGTA-NSANYLVSDGIK 118 (284)
T ss_dssp EEEEESCH-HHHHTTCBTTEE
T ss_pred EEEEecCH-HHHHHHHHCCCe
Confidence 77 78875 455566666764
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=88.90 E-value=0.055 Score=48.53 Aligned_cols=43 Identities=19% Similarity=0.152 Sum_probs=33.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC----HhhHHHHHHcCCeEEEEc
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNS----NQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs----~nDl~~A~~aG~~~I~v~ 303 (368)
.+--|..+++.+++ +++++++|||+ .||++|.+.+|.-.+.|.
T Consensus 184 ~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~ 230 (246)
T 3f9r_A 184 VGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT 230 (246)
T ss_dssp TTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS
T ss_pred CCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC
Confidence 44455777888777 89999999995 999999998886545543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=88.50 E-value=0.23 Score=44.05 Aligned_cols=14 Identities=14% Similarity=0.159 Sum_probs=12.6
Q ss_pred EEEEeccCccccCc
Q 043738 120 GAIFEWEGVIIEDN 133 (368)
Q Consensus 120 ~VIFDlDGTLid~~ 133 (368)
+|+||+||||++..
T Consensus 5 li~~DlDGTLl~~~ 18 (244)
T 1s2o_A 5 LLISDLDNTWVGDQ 18 (244)
T ss_dssp EEEECTBTTTBSCH
T ss_pred EEEEeCCCCCcCCH
Confidence 89999999999854
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 368 | ||||
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 4e-16 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 3e-13 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 4e-13 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 9e-13 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 1e-12 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-12 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 9e-12 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 3e-11 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 9e-11 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 3e-10 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 7e-10 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 9e-10 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 2e-09 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 5e-09 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 3e-07 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 4e-07 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 8e-07 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 1e-06 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 2e-06 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 5e-06 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 7e-06 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 74.5 bits (181), Expect = 4e-16
Identities = 45/212 (21%), Positives = 88/212 (41%), Gaps = 4/212 (1%)
Query: 121 AIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVL-CWSRD 179
AIF+ +G++I+ P + +A L + G L G++ + + +
Sbjct: 6 AIFDMDGLLIDSEPLWD-RAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWN 64
Query: 180 PAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS 239
+ + R+ +L L G +E V + + + L S P LE +
Sbjct: 65 GPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTM 124
Query: 240 IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC 299
+ + F A+ +AE + KP P++++ A L P C+ +S + A+ ARM+
Sbjct: 125 FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS 184
Query: 300 VAVASKHPVYELGA--ADLVVRHLDELSVVDL 329
+ V + + A++ + L EL+ DL
Sbjct: 185 IVVPAPEAQNDPRFVLANVKLSSLTELTAKDL 216
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 65.6 bits (158), Expect = 3e-13
Identities = 33/191 (17%), Positives = 67/191 (35%), Gaps = 2/191 (1%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
IF+ VI++ + + AW L + S +F + IS+
Sbjct: 4 IFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCH 63
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI- 240
E+ S E+ Q LR ++ L + ++S R +
Sbjct: 64 EMALPLSY-EQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP 122
Query: 241 GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCV 300
I + I ++D+ KP+ ++ + Q F P + F ++ +E A+ + +
Sbjct: 123 EIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSI 182
Query: 301 AVASKHPVYEL 311
V K + +
Sbjct: 183 LVKDKTTIPDY 193
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 66.4 bits (160), Expect = 4e-13
Identities = 27/208 (12%), Positives = 57/208 (27%), Gaps = 8/208 (3%)
Query: 125 WEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS----RDP 180
E +D L KQA + P A + + QA+ + +CW R
Sbjct: 45 EEEECQQDVSLLRKQAEEDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKT 104
Query: 181 AELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI 240
L+++ M V + + + S+ + +
Sbjct: 105 TALKQLQGHMWRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 164
Query: 241 GIEEYFTAIVAAED-VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC 299
+ + D K + E + A + + + + AA +A +
Sbjct: 165 TEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 224
Query: 300 VAVA---SKHPVYELGAADLVVRHLDEL 324
V + + ++ EL
Sbjct: 225 AVVVRPGNAGLTDDEKTYYSLITSFSEL 252
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 64.9 bits (156), Expect = 9e-13
Identities = 43/218 (19%), Positives = 84/218 (38%), Gaps = 11/218 (5%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRD 179
+F+ +GVI + +AW LA+E G + +++G+ E ++ ++L +
Sbjct: 4 AVLFDLDGVITDTAEYHF-RAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADK 62
Query: 180 PAELRRMASRMEEIYQALQGGIYR-----LRTGSKEFVNILMHYKIPMALVSTHPRKTLE 234
+ I + G + + L KI +AL S
Sbjct: 63 KVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGP-- 120
Query: 235 TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294
++ + + YF AI +V KP P++F+ AA + P I +S ++A D
Sbjct: 121 FLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD 180
Query: 295 ARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332
+ + V +LG ++V ++ LK +
Sbjct: 181 SGALPIGVGRPE---DLGDDIVIVPDTSHYTLEFLKEV 215
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 64.5 bits (155), Expect = 1e-12
Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 13/214 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI-------EGMKNEQAISEVL 174
F+ +G ++ PDL + + ++ ++ + +
Sbjct: 8 GFDLDGTLVNSLPDLAL-SINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQA 66
Query: 175 CWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLE 234
E + + Y I RL KE + L +A+V+ P K ++
Sbjct: 67 EKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQ 126
Query: 235 TAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHD 294
+ + GI+ F+ ++ + + KP P F Y P++ + G+S + AAH
Sbjct: 127 PILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHS 186
Query: 295 ARMKCVAVA----SKHPVYELGAADLVVRHLDEL 324
A V + P+ + D + ++
Sbjct: 187 AGCAVVGLTYGYNYNIPIAQSK-PDWIFDDFADI 219
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 65.2 bits (158), Expect = 2e-12
Identities = 34/165 (20%), Positives = 53/165 (32%), Gaps = 34/165 (20%)
Query: 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIV---------- 250
I R K +N L + + + P +++G+ YF A
Sbjct: 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA 272
Query: 251 ---AAEDVHRGKPDPEMFVYAA--------------QLLKFIPERCIVFGNSNQTVEAAH 293
+ GKP+P ++ A Q + + G+S + +A
Sbjct: 273 ENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQ 332
Query: 294 DARMKCVAVA----SKHPVYELGA--ADLVVRHLDELSVVDLKNL 332
+ K EL A AD V+ HL EL V L NL
Sbjct: 333 KIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGV-LDNL 376
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.7 bits (148), Expect = 9e-12
Identities = 22/207 (10%), Positives = 60/207 (28%), Gaps = 16/207 (7%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLT------------LAQEEGKSPPPAFILRRIEGMKNE 167
A+F+ +GV+ + + + I +
Sbjct: 4 AAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWI 63
Query: 168 QAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVST 227
+ E + A++ + + ++ + +L A+++
Sbjct: 64 PLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTN 123
Query: 228 HPRK----TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFG 283
A ++ +F ++ + V KP+P+++ + LK P +
Sbjct: 124 TWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLD 183
Query: 284 NSNQTVEAAHDARMKCVAVASKHPVYE 310
+ ++ A D M + V +
Sbjct: 184 DIGANLKPARDLGMVTILVQDTDTALK 210
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 60.2 bits (144), Expect = 3e-11
Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 9/210 (4%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
IF+ +GV+++ Q L E G + R + I +
Sbjct: 6 IFDCDGVLVDSEIIAA-QVESRLLTEAGYPISVEEMGERF-AGMTWKNILLQVESEASIP 63
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
+ + E++ ++ G K ++ L + + S+H + T +
Sbjct: 64 LSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKP 123
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
R KP P++F++ A P+R +V +S + A A M+ +
Sbjct: 124 YFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIG 183
Query: 302 VASKHPVYELGA-------ADLVVRHLDEL 324
Y A A+ V+ + +L
Sbjct: 184 FTGASHTYPSHADRLTDAGAETVISRMQDL 213
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 59.0 bits (141), Expect = 9e-11
Identities = 23/198 (11%), Positives = 57/198 (28%), Gaps = 16/198 (8%)
Query: 121 AIFEWEGVIIEDNPDLEKQAWL--------TLAQEEGKSPPPAFILRRIEGMKNEQAISE 172
A F+ +GV+ + + L P + ++G
Sbjct: 3 AAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVP 62
Query: 173 VL-CWSRDPAELRRMASRMEEIYQALQGGIY---RLRTGSKEFVNILMHYKIPMALVSTH 228
++ R ++ + + + L +V+ +
Sbjct: 63 LMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFTTCIVTNN 122
Query: 229 PRKT----LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN 284
A + ++F ++ + V KP+P+++ + LK P + +
Sbjct: 123 WLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDD 182
Query: 285 SNQTVEAAHDARMKCVAV 302
++ A D M + V
Sbjct: 183 FGSNLKPARDMGMVTILV 200
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 57.9 bits (138), Expect = 3e-10
Identities = 37/220 (16%), Positives = 72/220 (32%), Gaps = 14/220 (6%)
Query: 120 GAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNE------------ 167
IF W G ++ + ++ + + G + + + +K +
Sbjct: 4 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIA 63
Query: 168 QAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVST 227
+ V A+++ M EEI A+ G KE + L I + +
Sbjct: 64 SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 123
Query: 228 HPRKTLETAIDSI-GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLK-FIPERCIVFGNS 285
+ R+ ++ +V +DV G+P P M A L + I G++
Sbjct: 124 YTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDT 183
Query: 286 NQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELS 325
++ +A M V V L ++ EL
Sbjct: 184 VSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELR 223
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 56.4 bits (134), Expect = 7e-10
Identities = 27/220 (12%), Positives = 64/220 (29%), Gaps = 18/220 (8%)
Query: 122 IFEWEGVIIEDNPDLE------KQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLC 175
+ + EG + + E L Q++ + P + IL + EQ + +L
Sbjct: 7 LLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILE 66
Query: 176 W----SRDPAELRRMASRMEEIYQALQGGIY------RLRTGSKEFVNILMHYKIPMALV 225
+DP + Y++ Q K L+
Sbjct: 67 LVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQKLL 126
Query: 226 STHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNS 285
+ + A DS+ + Y + K + + + + + + ++
Sbjct: 127 FGYVQDPNAPAHDSLDLNSYIDGYFDI-NTSGKKTETQSYANILRDIGAKASEVLFLSDN 185
Query: 286 NQTVEAAHDARMKCVAVA-SKHPVYELGAADLVVRHLDEL 324
++AA + + + G V ++ + L
Sbjct: 186 PLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 56.0 bits (133), Expect = 9e-10
Identities = 26/213 (12%), Positives = 65/213 (30%), Gaps = 12/213 (5%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE------GMKNEQAISEVLC 175
F+ G + + + + G+ + +++E M +
Sbjct: 6 AFDLYGTLFDVHSVVG--RCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATE 63
Query: 176 WSRDPAELRRMASRMEEIYQALQGGIYRLRT--GSKEFVNILMHYKIPMALVSTHPRKTL 233
+ L RL + + L + +A++S +++
Sbjct: 64 DALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSI 123
Query: 234 ETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAH 293
+ + G+ + F +++ + V KPD ++ A Q L + ++ A
Sbjct: 124 DAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGAR 183
Query: 294 DARMKCVAVA-SKHPVYELG-AADLVVRHLDEL 324
+ + + E+G D V L +
Sbjct: 184 YFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 55.2 bits (131), Expect = 2e-09
Identities = 32/243 (13%), Positives = 72/243 (29%), Gaps = 34/243 (13%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE------GMKNEQAISEVLC 175
+F+ G + + + A G+ + +++E M V
Sbjct: 6 VFDAYGTLFDVQSVAD--ATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63
Query: 176 WSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLET 235
+ E + RL + + A++S L+
Sbjct: 64 EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQA 123
Query: 236 AIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA 295
+ + G+ + F A+++ + KP P+ + ++L P + ++ V A +
Sbjct: 124 LVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNF 183
Query: 296 RMKCVAV--------------ASKHPVYELGA-----------ADLVVRHLDELSVVDLK 330
V + P+ A D VV L +L + ++
Sbjct: 184 GFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRL-VR 242
Query: 331 NLA 333
+A
Sbjct: 243 GMA 245
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 54.0 bits (128), Expect = 5e-09
Identities = 31/216 (14%), Positives = 71/216 (32%), Gaps = 15/216 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSR-DP 180
+F+ +G +++ + E + G + I EVL +
Sbjct: 6 LFDIDGTLLKVESMNR-RVLADALIEVYGTEGSTGSHDFS-GKMDGAIIYEVLSNVGLER 63
Query: 181 AELRRMASRMEEIYQALQGGIYR-----LRTGSKEFVNILMHYKIPMALVSTHPRKTLET 235
AE+ + +E Y AL R L G +E ++ L + + T +
Sbjct: 64 AEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGR 123
Query: 236 AIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ----LLKFIPERCIVFGNSNQTVEA 291
+ +++ A D + + + P + ++ G++ +
Sbjct: 124 HKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRC 183
Query: 292 AHDARMKCVAVAS-KHPVYELGA--ADLVVRHLDEL 324
A + + +AVA+ + EL + ++ E
Sbjct: 184 ARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 219
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 48.3 bits (113), Expect = 3e-07
Identities = 30/204 (14%), Positives = 69/204 (33%), Gaps = 10/204 (4%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
I++ +G +++ + + + I + + V
Sbjct: 5 IWDLDGTLLDSYEAIL-SGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDV 63
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
E + +++ A + L G++E + I + TH T + +G
Sbjct: 64 E---VLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQF-IYTHKGNNAFTILKDLG 119
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
+E YFT I+ ++ KP PE Y + + G+ VE A ++ ++ +
Sbjct: 120 VESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSIN 179
Query: 302 VASKHPVYELGAADLVVRHLDELS 325
+ ++ L ++S
Sbjct: 180 FLESTY-----EGNHRIQALADIS 198
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 47.9 bits (112), Expect = 4e-07
Identities = 28/206 (13%), Positives = 68/206 (33%), Gaps = 11/206 (5%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
F+ +G +++ + + A+ +E G P A +R G E + + L +
Sbjct: 8 FFDLDGTLVDSSIGIH-NAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISE 66
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
++ S + ++ ++L L T + T +
Sbjct: 67 AVQIYRSYYKAKGIYEAQLFPQII-------DLLEELSSSYPLYITTTKDTSTAQDMAKN 119
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
+E + ++ A Q + PE+ I+ G++ + A + ++ +A
Sbjct: 120 LEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLA 179
Query: 302 VAS-KHPVYELGA--ADLVVRHLDEL 324
+ +L D + E+
Sbjct: 180 ITWGFGEQADLLNYQPDYIAHKPLEV 205
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 46.8 bits (109), Expect = 8e-07
Identities = 25/204 (12%), Positives = 60/204 (29%), Gaps = 8/204 (3%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
+F+ +G + P + GK PA + M EQA++E+ + +
Sbjct: 7 MFDIDGTLTNSQPAYT-TVMREVLATYGKPFSPAQAQKTF-PMAAEQAMTELGIAASEFD 64
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
+ + + + + ++ + L + +
Sbjct: 65 HFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRM 124
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
+D + KPDP + A + + P+ + G+S + A A +
Sbjct: 125 AVTISA-----DDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 179
Query: 302 VAS-KHPVYELGAADLVVRHLDEL 324
P + + ++
Sbjct: 180 AVWGMDPNADHQKVAHRFQKPLDI 203
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.0 bits (108), Expect = 1e-06
Identities = 11/114 (9%), Positives = 29/114 (25%), Gaps = 4/114 (3%)
Query: 189 RMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA 248
+ + +G +L E + L +P+A S + + +
Sbjct: 32 SSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI 91
Query: 249 IVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAV 302
F + + F + N+ + + C+ +
Sbjct: 92 QR----EIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHI 141
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 45.9 bits (107), Expect = 2e-06
Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 12/190 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
I++ G ++++ A++ G + + + ++
Sbjct: 7 IWDLGGTLLDNYETST-AAFVETLALYGITQDHDSVYQALKVSTPF-------AIETFAP 58
Query: 182 ELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG 241
L + +E L G + + + + + +H + ++
Sbjct: 59 NLENFLEKYKENEARELEHP-ILFEGVSDLLED-ISNQGGRHFLVSHRNDQVLEILEKTS 116
Query: 242 IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301
I YFT +V + + KP+PE +Y + + +V G+ +EA A +
Sbjct: 117 IAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHL 174
Query: 302 VASKHPVYEL 311
S + ++
Sbjct: 175 FTSIVNLRQV 184
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 44.8 bits (104), Expect = 5e-06
Identities = 24/217 (11%), Positives = 55/217 (25%), Gaps = 14/217 (6%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPA 181
F++ G ++ + + + P +L E + E + R
Sbjct: 6 FFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPIR 65
Query: 182 ELRRMASR-------------MEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTH 228
++ R EI+ + L E + L + +
Sbjct: 66 DIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGKYHVGMITDSD 125
Query: 229 PRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQT 288
+ + + + + E + + E V N +
Sbjct: 126 TEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKD 185
Query: 289 VEAAHDARMKCVAVASKHPVYELGA-ADLVVRHLDEL 324
+ + M + + K E D +V L E+
Sbjct: 186 CGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 44.8 bits (104), Expect = 7e-06
Identities = 37/226 (16%), Positives = 81/226 (35%), Gaps = 25/226 (11%)
Query: 122 IFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMK---------------- 165
F+ + +I D ++ L + + I
Sbjct: 10 FFDLDNTLI-DTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCI 68
Query: 166 ---NEQAISEVLCWSRDPAELRRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPM 222
E + ++ A+ R++A ++++ + L K + L + +
Sbjct: 69 TDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKE-VRL 127
Query: 223 ALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282
L++ R+T I++ + YF AIV + KP P +F + LL P C++
Sbjct: 128 LLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 187
Query: 283 GNSNQT-VEAAHDARMKCVAV---ASKHPVYELGAADLVVRHLDEL 324
G++ +T ++ +A +K + + P+ +V + EL
Sbjct: 188 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 368 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.98 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.97 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.97 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.96 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.96 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.96 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.96 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.95 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.94 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.93 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.93 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.93 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.93 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.91 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.91 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.87 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.86 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.85 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.83 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.81 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.79 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.78 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.75 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.75 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.73 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.72 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.68 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.66 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.65 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.62 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.57 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.53 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.49 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.35 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.24 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.21 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.17 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.16 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.01 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.96 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.95 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.9 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.89 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.84 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.83 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.82 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.61 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.61 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.54 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.32 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.19 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.11 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.06 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.05 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.27 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 96.93 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 96.85 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.84 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.74 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 89.72 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 84.43 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=7.9e-32 Score=239.55 Aligned_cols=212 Identities=21% Similarity=0.303 Sum_probs=169.5
Q ss_pred CCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC-CCHHHHHHHHHHHHHHH
Q 043738 116 CGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS-RDPAELRRMASRMEEIY 194 (368)
Q Consensus 116 ~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~ 194 (368)
++|++||||+||||+|+. .++..++.++++++|++.+....+..+.+.............. ........+.....+.+
T Consensus 1 ~~i~a~iFD~DGTL~dt~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (218)
T d1te2a_ 1 RQILAAIFDMDGLLIDSE-PLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARA 79 (218)
T ss_dssp CCCCEEEECCBTTTBCCH-HHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHH
T ss_pred CcceEEEECCCCcccCCH-HHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHH
Confidence 368999999999999864 5777899999999998876655555566666665554443221 22222223333333444
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
.........++||+.++|+.|+++|++++|+||++...++..++++|+.++|+.++++++++.+||++++|..+++++|+
T Consensus 80 ~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~ 159 (218)
T d1te2a_ 80 ISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGV 159 (218)
T ss_dssp HHHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTS
T ss_pred HHhhhccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHcCC
Confidence 44333345788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccc--cCCCcEEEcCchhhhHHH
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYE--LGAADLVVRHLDELSVVD 328 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~--~~~ad~vv~sl~eL~~~~ 328 (368)
+|++|++|||+.+|+.+|+++||.+|+|+++..... ...||++++++.||....
T Consensus 160 ~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~~~~ 215 (218)
T d1te2a_ 160 DPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKD 215 (218)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHHH
T ss_pred CchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCCHhh
Confidence 999999999999999999999999999986544333 245999999999996433
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.97 E-value=1.7e-29 Score=224.31 Aligned_cols=211 Identities=15% Similarity=0.214 Sum_probs=171.9
Q ss_pred CCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHH-------hcCCCHHHHHHHH
Q 043738 115 GCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVL-------CWSRDPAELRRMA 187 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l-------~~~~~~~~~~~l~ 187 (368)
|+++|+|+||+||||+|+. ..+..++.++++++|.........+...+........... .............
T Consensus 1 M~~~k~iiFD~DGTL~Ds~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSL-PDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFK 79 (224)
T ss_dssp CSSCSEEEECSBTTTEECH-HHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCcccCH-HHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHH
Confidence 4568999999999999865 4556788999999998877767677777776654433332 2223334444444
Q ss_pred HHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHH
Q 043738 188 SRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVY 267 (368)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~ 267 (368)
......+.........++||+.++|+.|+..|++++++||+....+...++++|+..+|+.++++++.+..||++++|..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~ 159 (224)
T d2hsza1 80 RQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYY 159 (224)
T ss_dssp HHHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccccccchhhHH
Confidence 44444444445555789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC-cccc--CCCcEEEcCchhhhH
Q 043738 268 AAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP-VYEL--GAADLVVRHLDELSV 326 (368)
Q Consensus 268 ~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~-~~~~--~~ad~vv~sl~eL~~ 326 (368)
+++++++++++|++|||+.+|+.+|+++|+.+|++..+.. ...+ ..||++++++.||..
T Consensus 160 ~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ 221 (224)
T d2hsza1 160 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 221 (224)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred HHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHH
Confidence 9999999999999999999999999999999999995443 2222 349999999999964
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.97 E-value=1.9e-29 Score=229.95 Aligned_cols=211 Identities=19% Similarity=0.245 Sum_probs=171.9
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHH-------------HHHHhcCCCHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAI-------------SEVLCWSRDPAEL 183 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~-------------~~~l~~~~~~~~~ 183 (368)
+||+||||+||||+|+.......++.+.++++|...+.+++ +...|....+.. ...+........+
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEA-RKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADI 79 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHH-HTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHH-HHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHH
Confidence 47999999999999876544457888889999998877664 445555443332 2233334455666
Q ss_pred HHHHHHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccc-cEEEeCCCCCCCCCCH
Q 043738 184 RRMASRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYF-TAIVAAEDVHRGKPDP 262 (368)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~F-d~iv~~e~v~~~KP~~ 262 (368)
..+...+.+.+...+.....++||+.++|+.|+++|++++++||.+...+...++++|+..+| |.++++++++.+||+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p 159 (257)
T d1swva_ 80 QEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYP 159 (257)
T ss_dssp HHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSS
T ss_pred HHHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccccccCh
Confidence 677777777777776666789999999999999999999999999999999999999999987 7889999999999999
Q ss_pred HHHHHHHHHcCCC-CCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcc--------------------------ccCCCc
Q 043738 263 EMFVYAAQLLKFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPVY--------------------------ELGAAD 315 (368)
Q Consensus 263 ~~~~~~le~lgi~-p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~--------------------------~~~~ad 315 (368)
++|..+++++|+. +++|++|||+.+|+.+|+++||.+|+|.++.... ....||
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999995 5999999999999999999999999998664310 112399
Q ss_pred EEEcCchhhhHHH
Q 043738 316 LVVRHLDELSVVD 328 (368)
Q Consensus 316 ~vv~sl~eL~~~~ 328 (368)
|+|+++.||..++
T Consensus 240 ~vi~~l~eL~~ii 252 (257)
T d1swva_ 240 FTIETMQELESVM 252 (257)
T ss_dssp EEESSGGGHHHHH
T ss_pred EEECCHHHHHHHH
Confidence 9999999997654
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.96 E-value=1.2e-29 Score=224.03 Aligned_cols=202 Identities=17% Similarity=0.270 Sum_probs=167.0
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
++|+|+|||||||+|+. ....++|..+++++|........ ....+....+.+... .........+...+.+.+..
T Consensus 2 ~~k~viFD~DGTL~ds~-~~~~~a~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 76 (207)
T d2hdoa1 2 TYQALMFDIDGTLTNSQ-PAYTTVMREVLATYGKPFSPAQA-QKTFPMAAEQAMTEL---GIAASEFDHFQAQYEDVMAS 76 (207)
T ss_dssp CCSEEEECSBTTTEECH-HHHHHHHHHHHHTTTCCCCHHHH-HHHTTSCHHHHHHHT---TCCGGGHHHHHHHHHHHHTT
T ss_pred CCcEEEEeCCCCcCcCH-HHHHHHHHHHHHHcCCCCCHHHH-HHHhcchhhhhhhcc---ccchhhHHHHHHHhhhhhcc
Confidence 47999999999999865 45568899999999999888775 445566666655443 22334444555555555544
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
.... ..++||+.++|+.|++ +++++++||+....+...++++|+..+|+.++++++.+..||++++|..+++++|+.|
T Consensus 77 ~~~~-~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 154 (207)
T d2hdoa1 77 HYDQ-IELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP 154 (207)
T ss_dssp CGGG-CEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred cccc-cccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccccchhhhhhhcccccceeeec
Confidence 4333 5889999999999975 6999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEc-CCCCccccCCCcEEEcCchhhh
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~-~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
++|++|||+.+|+.+|+++||.+|++. +.....+...++++++++.||.
T Consensus 155 ~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred cceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 999999999999999999999999998 4445555567999999999885
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.96 E-value=2.4e-28 Score=217.21 Aligned_cols=209 Identities=22% Similarity=0.390 Sum_probs=177.2
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhc---CCCHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCW---SRDPAELRRMASRMEEIY 194 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~l~~~~~~~~ 194 (368)
||+|+||+||||+|+. .++.+++..+++.+|.+.....+...+.+.........+..+ .........+...+.+.|
T Consensus 2 ikaiiFD~DGTL~ds~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T d1o08a_ 2 FKAVLFDLDGVITDTA-EYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80 (221)
T ss_dssp CCEEEECCBTTTBTHH-HHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCeEcCH-HHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHhhc
Confidence 7999999999999854 566789999999999988777777777788877777776643 456677777777777777
Q ss_pred HHHHCCc--cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHc
Q 043738 195 QALQGGI--YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 195 ~~~~~~~--~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l 272 (368)
....... ..++||+.++|+.|++.|++++++||+ ......++.+|+..+|+.++++++.+.+||++++|+.+++++
T Consensus 81 ~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~--~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~ 158 (221)
T d1o08a_ 81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp HHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHT
T ss_pred cccccccccccccCCceeccccccccccceEEEeec--chhhHHHHhhccccccccccccccccccccChHHHHHHHHHc
Confidence 7766542 578999999999999999999999997 446789999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhcc
Q 043738 273 KFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 273 gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L 332 (368)
|++|++||+|||+.+|+++|+++||++|+|++++. ...++.+++++.++....+++|
T Consensus 159 ~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~---~~~~~~~~~~~~~~~~~~l~el 215 (221)
T d1o08a_ 159 GVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPED---LGDDIVIVPDTSHYTLEFLKEV 215 (221)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHH---HCSSSEEESSGGGCCHHHHHHH
T ss_pred CCCCceEEEEecCHHHHHHHHHcCCEEEEECChhh---cccccEEcCCcccCCHHHHHHH
Confidence 99999999999999999999999999999986532 3346778888888876666664
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=1.8e-28 Score=216.36 Aligned_cols=204 Identities=16% Similarity=0.213 Sum_probs=167.7
Q ss_pred CCCceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 115 GCGWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 115 ~~~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
|.+||+|+||+||||+|+.. ....++.++++++|........++.+.+......+...+ ...........+...+
T Consensus 1 M~~ik~VifD~DGTL~ds~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 75 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSI-GIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCL----SKDQISEAVQIYRSYY 75 (210)
T ss_dssp CTTCCEEEECSBTTTEECHH-HHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTS----CGGGHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHH-HHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhccccc----cchhhHHHHHHHHHHH
Confidence 45689999999999998764 445788999999998877666678788877766655443 3344555555556666
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCC
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKF 274 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi 274 (368)
.........+++|+.++|+.++.+ ++++++||++....+..++++|+..+|+.++++++. +||++++|..+++++|+
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~--~~~~p~~~~~~~~~~~~ 152 (210)
T d2ah5a1 76 KAKGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQL 152 (210)
T ss_dssp HHTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS--CCSHHHHHHHHHHHTTC
T ss_pred HhhhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhccccccccccccccc--ccccccccchhhhhhhc
Confidence 655555578899999999999977 589999999999999999999999999999999875 57888999999999999
Q ss_pred CCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-Ccccc--CCCcEEEcCchhhhH
Q 043738 275 IPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYEL--GAADLVVRHLDELSV 326 (368)
Q Consensus 275 ~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~--~~ad~vv~sl~eL~~ 326 (368)
+|++|++|||+.+|+.+|+++|+++|+|..+. ...++ ..||++++++.||..
T Consensus 153 ~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 153 APEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred ccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 99999999999999999999999999998543 33333 249999999999854
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=2.9e-28 Score=214.42 Aligned_cols=197 Identities=15% Similarity=0.167 Sum_probs=157.1
Q ss_pred eEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHH
Q 043738 119 LGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS-RDPAELRRMASRMEEIYQAL 197 (368)
Q Consensus 119 k~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~~~ 197 (368)
+++|||+||||+|+.. ....++.++++++|.+.........+.+......+..+.... ...+.+. .+...+...
T Consensus 2 ~a~iFD~DGTL~ds~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 76 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYE-AILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDVEVLN----QVRAQSLAE 76 (204)
T ss_dssp CEEEECTBTTTEECHH-HHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCCHHHHH----HHHHHHHTT
T ss_pred EEEEEcCCCcCccCHH-HHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchhhhhHHHHH----HHHHHHHHh
Confidence 5899999999998764 445788999999999888877767676777766666554321 1222211 122222222
Q ss_pred HCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 198 QGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 198 ~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
......++||+.++|+.|+++|++++|+||+.. .+...++++|+..||+.++++++++..||++++|..+++++|++|+
T Consensus 77 ~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~ 155 (204)
T d2go7a1 77 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSD 155 (204)
T ss_dssp CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGG
T ss_pred hcccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhCCCCc
Confidence 233368899999999999999999999999876 4566899999999999999999999999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhH
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSV 326 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~ 326 (368)
+|++|||+.+|+.+|+++||.+|++..+.. .+++.+.++.++..
T Consensus 156 ~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~-----~~~~~~~~~~dl~~ 199 (204)
T d2go7a1 156 NTYYIGDRTLDVEFAQNSGIQSINFLESTY-----EGNHRIQALADISR 199 (204)
T ss_dssp GEEEEESSHHHHHHHHHHTCEEEESSCCSC-----TTEEECSSTTHHHH
T ss_pred eEEEEeCCHHHHHHHHHcCCeEEEEcCCCC-----CcCeecCCHHHHHH
Confidence 999999999999999999999999875531 37888888888753
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=1.1e-27 Score=212.96 Aligned_cols=207 Identities=21% Similarity=0.366 Sum_probs=164.1
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcC---CCHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWS---RDPAELRRMASRMEEI 193 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~---~~~~~~~~l~~~~~~~ 193 (368)
++|+||||+||||+|+. .++.++|.++++++|++.+..++...+.|.........+.... .....+... ...
T Consensus 1 ~~kaviFD~DGtL~dt~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 75 (222)
T d2fdra1 1 GFDLIIFDCDGVLVDSE-IIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKS----EKL 75 (222)
T ss_dssp CCSEEEECSBTTTBCCH-HHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTHHHHHH----HHH
T ss_pred CceEEEECCCCcccCCH-HHHHHHHHHHHHHcCCCCCHHHHHHHHhhhccccccccccccccccccccchhHH----HHH
Confidence 47999999999999864 5777899999999999999888888888888887776654332 233333333 333
Q ss_pred HHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeC-CC--CCCCCCCHHHHHHHHH
Q 043738 194 YQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAA-ED--VHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 194 ~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~-e~--v~~~KP~~~~~~~~le 270 (368)
+.........++||+.++|+.++ .+.+++|+.....+...++++|+..+|+.++++ ++ ....||++++|..+++
T Consensus 76 ~~~~~~~~~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~ 152 (222)
T d2fdra1 76 LDMRLERDVKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAA 152 (222)
T ss_dssp HHHHHHHHCCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHH
T ss_pred HHHHhhhccchhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHH
Confidence 33333334688999999998876 457899999999999999999999999975554 32 5678999999999999
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccc-----c--CCCcEEEcCchhhhHHHHhcc
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYE-----L--GAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~-----~--~~ad~vv~sl~eL~~~~l~~L 332 (368)
++|++|++|++|||+..|+.+|+++||.+|++.++..... + ..||++++++.||... +..|
T Consensus 153 ~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~l-l~~l 220 (222)
T d2fdra1 153 QFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV-IAAM 220 (222)
T ss_dssp HHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH-HHHH
T ss_pred hhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHH-HHHh
Confidence 9999999999999999999999999999999996653221 1 2499999999999544 4443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.94 E-value=1.9e-26 Score=206.14 Aligned_cols=210 Identities=16% Similarity=0.271 Sum_probs=152.6
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHH-hCCCCCHHHHHHHHhCCCHHHHHHHHHhcC-CCHHH----HHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQE-EGKSPPPAFILRRIEGMKNEQAISEVLCWS-RDPAE----LRRMASRME 191 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~-~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~~~----~~~l~~~~~ 191 (368)
.|+||||+||||+|+.. .+..++...+.+ ++....... ..+.+........+.+... ..... +......+.
T Consensus 2 ~klviFD~DGTL~d~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVES-MNRRVLADALIEVYGTEGSTGS--HDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYI 78 (228)
T ss_dssp CEEEEECCBTTTEEECT-HHHHHHHHHHHHHHSCCCCC-----CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHH-HHHHHHHHHHHHHcCCCccHHH--HHHhcCchHHHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 47899999999998664 555666665554 454433222 1223333444444443322 22222 223333333
Q ss_pred HHHHHHHC-CccccCccHHHHHHHHHhCC-CcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHH
Q 043738 192 EIYQALQG-GIYRLRTGSKEFVNILMHYK-IPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAA 269 (368)
Q Consensus 192 ~~~~~~~~-~~~~~~pg~~elL~~Lk~~G-i~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~l 269 (368)
..+..... ....++||+.++|+.|+++| ++++++||.....+...++.+|+..+|+.++++++....||++.++...+
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~ 158 (228)
T d2hcfa1 79 ALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERA 158 (228)
T ss_dssp HHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHH
T ss_pred HHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccccchhHHHHHHh
Confidence 33333322 23578999999999999987 89999999999999999999999999999999999999999999877776
Q ss_pred HHc---CCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcC-CCCccccC--CCcEEEcCchhhhHHHHh
Q 043738 270 QLL---KFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPVYELG--AADLVVRHLDELSVVDLK 330 (368)
Q Consensus 270 e~l---gi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~-~~~~~~~~--~ad~vv~sl~eL~~~~l~ 330 (368)
..+ +++|++|++|||+.+|+.+|+++||.+|+|.+ .+...++. .||++++++.||...+..
T Consensus 159 ~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~ 225 (228)
T d2hcfa1 159 RRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLAS 225 (228)
T ss_dssp HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHH
T ss_pred hhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHH
Confidence 666 78999999999999999999999999999984 44444332 489999999999766543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.93 E-value=7.4e-26 Score=202.69 Aligned_cols=126 Identities=20% Similarity=0.308 Sum_probs=113.8
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|+ .|++++++||++...+...++++|+.++|+.++++++++..||++++|..+++++|++|++|++
T Consensus 99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~ 177 (230)
T d1x42a1 99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVY 177 (230)
T ss_dssp CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CcccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccccccccccccccchhhHHHHHHHhhhcccccccce
Confidence 578999999999997 4799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCH-hhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchhhhHHH
Q 043738 282 FGNSN-QTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~-nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~eL~~~~ 328 (368)
|||+. +|+.+|+++|+++|++++....... ..+|++++|+.||...+
T Consensus 178 vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 178 VGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp EESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred eecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHH
Confidence 99986 8999999999999999855444333 35999999999995443
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.93 E-value=1.1e-25 Score=195.73 Aligned_cols=178 Identities=17% Similarity=0.221 Sum_probs=141.6
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVLCWSRDPAELRRMASRMEEIYQA 196 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (368)
++|+||||+||||+|+. .....++.++++.+|...+.... ....+......+...... .......+.+.+..
T Consensus 2 ~~k~viFD~DGTL~dt~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 73 (187)
T d2fi1a1 2 KYHDYIWDLGGTLLDNY-ETSTAAFVETLALYGITQDHDSV-YQALKVSTPFAIETFAPN------LENFLEKYKENEAR 73 (187)
T ss_dssp CCSEEEECTBTTTBCHH-HHHHHHHHHHHHHTTCCCCHHHH-HHHHHHCHHHHHHHHCTT------CTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcccCH-HHHHHHHHHHHHHcCCCccHHHH-HhhhhccchhhhhhhhHH------HHHHHHHHHHHHHH
Confidence 48999999999999865 45568899999999998877665 334444444444443211 12223334444444
Q ss_pred HHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCC
Q 043738 197 LQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIP 276 (368)
Q Consensus 197 ~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p 276 (368)
.... ..++||+.++|+.|++.|++++++||...... ..++++++..+|+.+++++++...||++++|..++++++++
T Consensus 74 ~~~~-~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~- 150 (187)
T d2fi1a1 74 ELEH-PILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS- 150 (187)
T ss_dssp HTTS-CCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS-
T ss_pred Hhhc-CcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccccCCCHHHHHHHHHHcCCC-
Confidence 4443 58899999999999999999999999877665 47899999999999999999999999999999999999864
Q ss_pred CcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 277 ERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 277 ~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+|++|||+.+|+++|+++|+++|+++++.
T Consensus 151 -~~l~vgDs~~Di~aA~~aG~~~i~v~~~~ 179 (187)
T d2fi1a1 151 -SGLVIGDRPIDIEAGQAAGLDTHLFTSIV 179 (187)
T ss_dssp -SEEEEESSHHHHHHHHHTTCEEEECSCHH
T ss_pred -CeEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 59999999999999999999999988643
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.93 E-value=5e-26 Score=205.45 Aligned_cols=126 Identities=22% Similarity=0.372 Sum_probs=111.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++||+.++|+.|++ |++++++||++...+...++++|+..+|+.++++++++.+||++++|..+++++|++|++|++
T Consensus 108 ~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 186 (247)
T d2gfha1 108 MILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVM 186 (247)
T ss_dssp CCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhhcCHHhcce
Confidence 5789999999999985 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCH-hhHHHHHHcCCeE-EEEcCCCCc--cccCCCcEEEcCchhhhHHH
Q 043738 282 FGNSN-QTVEAAHDARMKC-VAVASKHPV--YELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~-nDl~~A~~aG~~~-I~v~~~~~~--~~~~~ad~vv~sl~eL~~~~ 328 (368)
|||+. +|+.+|.++||++ ++++..... .....||++++++.||...+
T Consensus 187 iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 187 VGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp EESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred eccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHH
Confidence 99997 8999999999985 455543322 22234999999999986544
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.93 E-value=2.6e-25 Score=196.87 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=114.4
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..+++++.++++.++..|++++++||+....++..+.+.++..+||.++++++++..||++++|..+++++|++|++|++
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~ 171 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILF 171 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCceEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCC-Cccc-cCCCcEEEcCchhhhH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKH-PVYE-LGAADLVVRHLDELSV 326 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~-~~~ad~vv~sl~eL~~ 326 (368)
|||+.+|+.+|+++||++|+++.+. ...+ ...||++|+++.||..
T Consensus 172 VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~ 218 (220)
T d1zrna_ 172 VASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVE 218 (220)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHT
T ss_pred EecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHh
Confidence 9999999999999999999998433 2222 2348999999999853
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=6.2e-24 Score=190.06 Aligned_cols=124 Identities=9% Similarity=0.036 Sum_probs=107.6
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEe-CCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVA-AEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~-~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
...++||+.++|+.|+++|++++++||+....++..++..|+..+|+.... .++....||++.+|..+++++|++|++|
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~ 204 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI 204 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCcCcE
Confidence 357899999999999999999999999999999999999999988875433 3556779999999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCCc---cccCCCcEEEcCchhh
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHPV---YELGAADLVVRHLDEL 324 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~~---~~~~~ad~vv~sl~eL 324 (368)
+||||+.+|+.+|+++||++|+|.+.... .....++.+|+||.||
T Consensus 205 l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 205 LFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred EEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 99999999999999999999999743221 2223378899999987
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.91 E-value=5.6e-24 Score=191.03 Aligned_cols=125 Identities=18% Similarity=0.278 Sum_probs=111.1
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
..++|++.++|+.|+ ++.++++||.....+...+.++++..+||.++++++++..||+|++|..+++++|++|++|++
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~ 169 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLF 169 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEE
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhCCChhhEEE
Confidence 578999999999886 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHhhHHHHHHcCCeEEEEcCCCCc------------------------cc-cCCCcEEEcCchhhhHHH
Q 043738 282 FGNSNQTVEAAHDARMKCVAVASKHPV------------------------YE-LGAADLVVRHLDELSVVD 328 (368)
Q Consensus 282 IGDs~nDl~~A~~aG~~~I~v~~~~~~------------------------~~-~~~ad~vv~sl~eL~~~~ 328 (368)
|||+.+|+.+|+++||++|+|+..... .. ...+|++++++.||+..+
T Consensus 170 VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv 241 (245)
T d1qq5a_ 170 VSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (245)
T ss_dssp EESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred EeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHHH
Confidence 999999999999999999999743210 00 124999999999997554
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=9.2e-22 Score=172.82 Aligned_cols=104 Identities=14% Similarity=0.190 Sum_probs=93.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHH----HHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKT----LETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~----~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
..++||+.++|..|+++|++++++||..... ........++..+||.++++++++.+||++++|..+++++|++|+
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~ 177 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPS 177 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhcccCcc
Confidence 5889999999999999999999999975543 334445667889999999999999999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
+|++|||+..|+.+|+++||++|++.++
T Consensus 178 e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 178 EVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp GEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred ceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999999999999998754
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=9.4e-23 Score=180.21 Aligned_cols=105 Identities=15% Similarity=0.195 Sum_probs=95.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC----hHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP----RKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPE 277 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~----~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~ 277 (368)
..++|++.++|..|+++|++++++||+. .......+..+|+..|||.++++++++.+||++++|..++++++++|+
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~ 175 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPN 175 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTT
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHhCCCcc
Confidence 5789999999999999999999999853 335566677889999999999999999999999999999999999999
Q ss_pred cEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 278 RCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 278 ~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
+||||||+.+|+.+|+++||++|+|..+.
T Consensus 176 ~~l~IgD~~~Di~~A~~aG~~ti~V~~~~ 204 (222)
T d1cr6a1 176 EVVFLDDFGSNLKPARDMGMVTILVHNTA 204 (222)
T ss_dssp SEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred eEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999999999999999987543
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=2.6e-21 Score=170.51 Aligned_cols=203 Identities=12% Similarity=0.116 Sum_probs=128.1
Q ss_pred CceEEEEeccCccccCcc------hHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHH---hcCCCHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNP------DLEKQAWLTLAQEEGKSPPPAFILRRIEGMKNEQAISEVL---CWSRDPAELRRMA 187 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~------~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l---~~~~~~~~~~~l~ 187 (368)
++++|+||+||||+|+.. .+..+...+++.+.+......................... ...........+.
T Consensus 2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (225)
T d2g80a1 2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ 81 (225)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 578999999999998531 1112333333444444433344334343444443332222 1122222222332
Q ss_pred HHHHHHHHHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHH-----------HHcCccccccEEEeCCCCC
Q 043738 188 SRMEEIYQALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAI-----------DSIGIEEYFTAIVAAEDVH 256 (368)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l-----------~~~gl~~~Fd~iv~~e~v~ 256 (368)
....+...........+++++.+++. .+..+++.++.......... ..+|+..+|+.+++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~ 157 (225)
T d2g80a1 82 GYVWAHGYESGQIKAPVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG 157 (225)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC
T ss_pred HHHHHHHHHhhcccccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC
Confidence 22222222222222355666666553 44678888887766554443 3458889999998886554
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC-CccccCCCcEEEcCchhh
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH-PVYELGAADLVVRHLDEL 324 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~-~~~~~~~ad~vv~sl~eL 324 (368)
.||++++|..+++++|+.|++|++|||+.+|+.+|+++||++|+|.... .......+..++++|.||
T Consensus 158 -~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 158 -KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp -CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred -CCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 7999999999999999999999999999999999999999999998433 323333467789999886
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=2e-21 Score=166.62 Aligned_cols=107 Identities=17% Similarity=0.232 Sum_probs=98.4
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-CccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSI-GIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~-gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
...+.+++.+++..++..|+.++++||++.......+..+ ++..+|+.++++++.+..||++++|+.+++++|++|++|
T Consensus 82 ~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 161 (197)
T d2b0ca1 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDT 161 (197)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred ccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHHHhcCCCCCeE
Confidence 3578899999999999999999999998877777777765 788999999999999999999999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
++|||+.+|+++|+++||++|+|+....
T Consensus 162 l~vgDs~~di~~A~~aG~~ti~v~~~~~ 189 (197)
T d2b0ca1 162 VFFDDNADNIEGANQLGITSILVKDKTT 189 (197)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECCSTTH
T ss_pred EEEeCCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999986643
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=5.3e-20 Score=156.51 Aligned_cols=102 Identities=12% Similarity=0.170 Sum_probs=92.2
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCCh-HHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPR-KTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERC 279 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~-~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~ 279 (368)
.+.++||+.++|+.|+++|++++++|+... ...+..++.+++..+|+.+... .||+++.|..+++++|++|++|
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~kp~~~~~~~~~~~~~~~~~~~ 118 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY-----PGSKVTHFERLHHKTGVPFSQM 118 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES-----SSCHHHHHHHHHHHHCCCGGGE
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc-----cCCChHHHHHHHHHhCCChHHE
Confidence 368999999999999999999999998765 4567788999999999988665 5799999999999999999999
Q ss_pred EEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 280 IVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 280 l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
+||||+..|+++|+++||.+|+|.++..
T Consensus 119 l~igD~~~di~aA~~aG~~~i~v~~G~~ 146 (164)
T d1u7pa_ 119 VFFDDENRNIIDVGRLGVTCIHIRDGMS 146 (164)
T ss_dssp EEEESCHHHHHHHHTTTCEEEECSSCCC
T ss_pred EEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 9999999999999999999999987654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=1.4e-19 Score=160.77 Aligned_cols=191 Identities=18% Similarity=0.191 Sum_probs=120.0
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhC--CCHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEG--MKNEQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
..++|+|||||||++.+ +|..++...|.......+...... ....+.+.... ..+.....+.+
T Consensus 9 ~~~aV~FD~DGTLi~~e------~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~ 73 (217)
T d1nnla_ 9 SADAVCFDVDSTVIREE------GIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERL---------ALIQPSREQVQ 73 (217)
T ss_dssp HCSEEEEETBTTTBSSC------HHHHHHHHTTCTTTC------------CHHHHHHHHH---------HHHCCCHHHHH
T ss_pred CCCEEEEcCccccCCcc------HHHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHH---------HhcccchHHHH
Confidence 35789999999999864 567777778776544333222221 12222222111 11111112223
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccc--c--------cEEEeCCCC----CCCCC
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEY--F--------TAIVAAEDV----HRGKP 260 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~--F--------d~iv~~e~v----~~~KP 260 (368)
.........++||+.++++.|+++|++++++|++....++.+++.+|+..+ | +..+++... ...+.
T Consensus 74 ~~~~~~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~ 153 (217)
T d1nnla_ 74 RLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG 153 (217)
T ss_dssp HHHHHSCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred HHHHhhccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccch
Confidence 333334467899999999999999999999999999999999999998743 1 111111111 11223
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchhhh
Q 043738 261 DPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDELS 325 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~eL~ 325 (368)
+...++.+.+. +++++|++||||.||+.|++.+|+.+ +++........ ..+++++.++.||.
T Consensus 154 K~~~v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~v-a~~~~~~~~~~~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 154 KGKVIKLLKEK--FHFKKIIMIGDGATDMEACPPADAFI-GFGGNVIRQQVKDNAKWYITDFVELL 216 (217)
T ss_dssp HHHHHHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEE-EECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred HHHHHHHHHhc--cCccccEEEEeCHhhHHHHHhCCceE-EECCCHHHHHHHHhCCCEeCCHHHhc
Confidence 45666666554 45789999999999999999999864 44433222222 34999999999984
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.78 E-value=1.3e-19 Score=160.76 Aligned_cols=195 Identities=13% Similarity=0.073 Sum_probs=125.5
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHH-hC-CCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRI-EG-MKNEQAISEVLCWSRDPAELRRMASRMEEIYQ 195 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~-~g-~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (368)
..+|+|||||||+++. ++..+++.++... ...+.... .+ ....+.....+... .....+.+.
T Consensus 4 k~lVifD~DGTL~~~d------~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 67 (226)
T d2feaa1 4 KPFIICDFDGTITMND------NIINIMKTFAPPE-WMALKDGVLSKTLSIKEGVGRMFGLL---------PSSLKEEIT 67 (226)
T ss_dssp CEEEEECCTTTTBSSC------HHHHHHHHHSCTH-HHHHHHHHHTTSSCHHHHHHHHHTTS---------BGGGHHHHH
T ss_pred CeEEEEeCCCCCcCch------HHHHHHHHHCcch-HHHHHHHHHcCcccHHHHHHHHHHHh---------ccccHHHHH
Confidence 4679999999999754 3445556665431 11221211 11 12222222222110 011112222
Q ss_pred HHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccE---EEeCC----------CCCCCCCCH
Q 043738 196 ALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA---IVAAE----------DVHRGKPDP 262 (368)
Q Consensus 196 ~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~---iv~~e----------~v~~~KP~~ 262 (368)
.......+++||+.++++.|+++|++++++|++....++.+++++|+..+|.. .+..+ .....++++
T Consensus 68 ~~~~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~ 147 (226)
T d2feaa1 68 SFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG 147 (226)
T ss_dssp HHHHHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred HHHHhccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCH
Confidence 22222367999999999999999999999999999999999999998877632 11111 123357788
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHH
Q 043738 263 EMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVD 328 (368)
Q Consensus 263 ~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~ 328 (368)
..+..+++.+++++++|+|||||.+|++||++||+.++.-.......+...+...+++++++...+
T Consensus 148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l 213 (226)
T d2feaa1 148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEI 213 (226)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHH
Confidence 889999999999999999999999999999999974432111111222233556678999885443
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.75 E-value=7.8e-19 Score=152.54 Aligned_cols=189 Identities=15% Similarity=0.187 Sum_probs=127.3
Q ss_pred CceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHh--CCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 117 GWLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIE--GMKNEQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
+.|+|+||+||||+|+. ++..+++..|.......+..... ................. ......
T Consensus 3 kkKlv~FDlDGTL~d~e------s~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 67 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNNE------TIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKD---------LPIEKV 67 (210)
T ss_dssp CCCEEEECCCCCCBSSC------HHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTT---------CBHHHH
T ss_pred CCeEEEEeCCCCcCCch------HHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHHhh---------hHHHHH
Confidence 46999999999999864 56677777776432222211111 11111111111100000 000111
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC----------CCCCCCCCHHH
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE----------DVHRGKPDPEM 264 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e----------~v~~~KP~~~~ 264 (368)
.... ....+.+++.++++.+..+|..++++|+.....+.....+.+...++...+..+ ....+++++..
T Consensus 68 ~~~~-~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (210)
T d1j97a_ 68 EKAI-KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI 146 (210)
T ss_dssp HHHH-HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred HHHh-hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccccccccch
Confidence 1111 225889999999999999999999999999899999888888777765444332 34567788999
Q ss_pred HHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCc--hhh
Q 043738 265 FVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHL--DEL 324 (368)
Q Consensus 265 ~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl--~eL 324 (368)
+..+++++++.++++++||||.||++|++.+|+++++ + +.+ .....||+++++. +++
T Consensus 147 ~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-n-a~~-~lk~~Ad~vi~~~d~~~v 205 (210)
T d1j97a_ 147 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-C-AKP-ILKEKADICIEKRDLREI 205 (210)
T ss_dssp HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-S-CCH-HHHTTCSEEECSSCGGGG
T ss_pred hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-C-CCH-HHHHhCCEEEcCCCHHHH
Confidence 9999999999999999999999999999999997655 3 222 2224599999854 455
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=4e-18 Score=147.28 Aligned_cols=126 Identities=17% Similarity=0.238 Sum_probs=95.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---------------HHHHHHHHcCccccccEEEeC-----------CCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---------------TLETAIDSIGIEEYFTAIVAA-----------EDV 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---------------~~~~~l~~~gl~~~Fd~iv~~-----------e~v 255 (368)
..++||+.++|+.|+++|++++++||.+.. .+...+...|+. ..+..+|. ++.
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~cp~~p~~~~~~~~~~~ 104 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEEFRQVC 104 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGGGBSCC
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc-ccceeecccccccccccccccc
Confidence 478899999999999999999999997531 112222333332 12233332 234
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeE-EEEcCCCCcccc--CCCcEEEcCchhhhHHH
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPVYEL--GAADLVVRHLDELSVVD 328 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~-I~v~~~~~~~~~--~~ad~vv~sl~eL~~~~ 328 (368)
...||+|.++..+++++++++++++||||+.+|+++|++||+.+ +.+.+++...+. ..||++++++.|+...+
T Consensus 105 ~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~i 180 (182)
T d2gmwa1 105 DCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 180 (182)
T ss_dssp SSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred cccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHh
Confidence 56799999999999999999999999999999999999999965 667766544332 23999999999997654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.73 E-value=8.6e-18 Score=148.47 Aligned_cols=117 Identities=18% Similarity=0.259 Sum_probs=86.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCCh---------------HHHHHHHHHcCccccccEEEeCC------------C
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPR---------------KTLETAIDSIGIEEYFTAIVAAE------------D 254 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~---------------~~~~~~l~~~gl~~~Fd~iv~~e------------~ 254 (368)
..++||+.++|+.|+++|++++++||.+. ..+...++..|+. ++.++.+. +
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 124 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPLAIPD 124 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTTCCSS
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccc--cceEEEecccccccccccccc
Confidence 47889999999999999999999998431 1222334444432 44443332 2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
....||++.++..+++++++++++|+||||+.+|+++|+++||+++++..+..... +++.+.++.+
T Consensus 125 ~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~---~~~~~~~~~~ 190 (209)
T d2o2xa1 125 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQ---PGFAIRPLRD 190 (209)
T ss_dssp CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEE---TTEEEEEESS
T ss_pred cccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCccc---CCccccCccc
Confidence 23469999999999999999999999999999999999999999999876554333 3444444433
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=4.9e-19 Score=150.22 Aligned_cols=105 Identities=10% Similarity=0.140 Sum_probs=81.0
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC---------------hHHHHHHHHHcCccc---cccEEEeCCCCCCCCCCHH
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP---------------RKTLETAIDSIGIEE---YFTAIVAAEDVHRGKPDPE 263 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~---------------~~~~~~~l~~~gl~~---~Fd~iv~~e~v~~~KP~~~ 263 (368)
..++||+.++|+.|++.|++++++||.+ ...+...+...|+.. +|+..+..++....||+|.
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~ 108 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVK 108 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSG
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeeccccccccccccccccH
Confidence 5789999999999999999999999964 122344555555541 2222333455677899999
Q ss_pred HHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCC
Q 043738 264 MFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 306 (368)
Q Consensus 264 ~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~ 306 (368)
++.++++++|++|++|+||||+..|+++|+++||++|+++...
T Consensus 109 ~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 109 LVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 151 (161)
T ss_dssp GGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred HHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence 9999999999999999999999999999999999999987554
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=2.8e-18 Score=155.32 Aligned_cols=81 Identities=16% Similarity=0.243 Sum_probs=66.7
Q ss_pred cccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCC-CccccC----CCcEEE
Q 043738 245 YFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKH-PVYELG----AADLVV 318 (368)
Q Consensus 245 ~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~-~~~~~~----~ad~vv 318 (368)
+|+.+...+....+||++.+|.++++++|++|++|+||||++ +|+.+|+++||++|+|.++. ...++. .||+++
T Consensus 162 ~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~ 241 (250)
T d2c4na1 162 GIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY 241 (250)
T ss_dssp HHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE
T ss_pred HHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEE
Confidence 344444556667789999999999999999999999999997 59999999999999998553 333332 279999
Q ss_pred cCchhhh
Q 043738 319 RHLDELS 325 (368)
Q Consensus 319 ~sl~eL~ 325 (368)
+|+.||+
T Consensus 242 ~sl~eL~ 248 (250)
T d2c4na1 242 PSVAEID 248 (250)
T ss_dssp SSGGGCC
T ss_pred CCHHHhC
Confidence 9999985
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.66 E-value=3.4e-16 Score=141.94 Aligned_cols=74 Identities=22% Similarity=0.317 Sum_probs=62.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc----CCCcEEEcCchhhhHHH
Q 043738 255 VHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL----GAADLVVRHLDELSVVD 328 (368)
Q Consensus 255 v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~----~~ad~vv~sl~eL~~~~ 328 (368)
+..+||++.+|..+++++|++|++|+||||+. +||.+|+++||++|+|.++.. ..++ ..|||+++++.||...+
T Consensus 181 ~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 181 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred cccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 34579999999999999999999999999996 699999999999999986543 2222 23799999999996543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.65 E-value=3.7e-17 Score=148.09 Aligned_cols=118 Identities=16% Similarity=0.122 Sum_probs=77.5
Q ss_pred HHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcC---ccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcC
Q 043738 208 SKEFVNILMHYKIPMALVSTHPRKTLETAIDSIG---IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGN 284 (368)
Q Consensus 208 ~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~g---l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGD 284 (368)
...++..+...+...+++||.............+ +..++....+.+....+||++.+|..+++++|++|++|+||||
T Consensus 126 ~~~~~~~~~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGD 205 (253)
T d1wvia_ 126 EKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGD 205 (253)
T ss_dssp HHHHHHHHHHHTTCEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEES
T ss_pred HHHHHHhhhhhhccccccCCCCceeEcCCcccccCCcchhcccccccceeEEeccCCcccceehhhhccccccceEEEcC
Confidence 3344444444556677778764322110000001 1111222233344456799999999999999999999999999
Q ss_pred CH-hhHHHHHHcCCeEEEEcCC-CCccccC----CCcEEEcCchhhh
Q 043738 285 SN-QTVEAAHDARMKCVAVASK-HPVYELG----AADLVVRHLDELS 325 (368)
Q Consensus 285 s~-nDl~~A~~aG~~~I~v~~~-~~~~~~~----~ad~vv~sl~eL~ 325 (368)
+. +|+.+|+++||++|+|..+ ....+.. .||++++|+.|+.
T Consensus 206 s~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~ 252 (253)
T d1wvia_ 206 NYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD 252 (253)
T ss_dssp CTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred ChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence 97 5999999999999999854 3232221 2799999999873
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.62 E-value=4.5e-16 Score=140.61 Aligned_cols=80 Identities=20% Similarity=0.266 Sum_probs=65.4
Q ss_pred ccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHHHHcCCeEEEEcCCCC-cccc----CCCcEEEc
Q 043738 246 FTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSN-QTVEAAHDARMKCVAVASKHP-VYEL----GAADLVVR 319 (368)
Q Consensus 246 Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A~~aG~~~I~v~~~~~-~~~~----~~ad~vv~ 319 (368)
+..+++.+....+||++.+|.++++++|++|++|+||||+. +|++||+++||++|+|.++.. .... ..||++++
T Consensus 167 ~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~ 246 (253)
T d1yv9a1 167 VETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 246 (253)
T ss_dssp HHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred ccccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEEC
Confidence 34445556667799999999999999999999999999997 699999999999999985432 2222 13799999
Q ss_pred Cchhhh
Q 043738 320 HLDELS 325 (368)
Q Consensus 320 sl~eL~ 325 (368)
|+.|+.
T Consensus 247 sl~e~~ 252 (253)
T d1yv9a1 247 SLDEWT 252 (253)
T ss_dssp SGGGCC
T ss_pred CHHHcC
Confidence 999974
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.57 E-value=2.1e-15 Score=144.68 Aligned_cols=127 Identities=23% Similarity=0.260 Sum_probs=106.5
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccE--EEeCC-----------CCCCCCCCHHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTA--IVAAE-----------DVHRGKPDPEMFVYAA 269 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~--iv~~e-----------~v~~~KP~~~~~~~~l 269 (368)
++.+|+.++|+.|+++|++++++||.+...+...++++|+..+|+. +++++ .....||+|+.|..++
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~ 294 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAAL 294 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHH
Confidence 3566999999999999999999999999999999999999999974 55543 3467899999999887
Q ss_pred HH--------------cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcc----cc--CCCcEEEcCchhhhHHHH
Q 043738 270 QL--------------LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVY----EL--GAADLVVRHLDELSVVDL 329 (368)
Q Consensus 270 e~--------------lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~----~~--~~ad~vv~sl~eL~~~~l 329 (368)
.. +++.++.|+||||+.||+.+|+++|+.+|+|.++.... ++ ..||++++++.||...+.
T Consensus 295 ~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~ 374 (380)
T d1qyia_ 295 YGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374 (380)
T ss_dssp HCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHS
T ss_pred HHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHH
Confidence 54 46778999999999999999999999999998554322 21 259999999999965543
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.53 E-value=5.9e-15 Score=127.29 Aligned_cols=190 Identities=15% Similarity=0.143 Sum_probs=122.0
Q ss_pred ceEEEEeccCccccCcchHHHHHHHHHHHHhCCCCCHHHHHHHHhCC---CHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 043738 118 WLGAIFEWEGVIIEDNPDLEKQAWLTLAQEEGKSPPPAFILRRIEGM---KNEQAISEVLCWSRDPAELRRMASRMEEIY 194 (368)
Q Consensus 118 ik~VIFDlDGTLid~~~~i~~~a~~~~~~~~g~~~~~~~~~~~~~g~---~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 194 (368)
+|+|+|||||||++ ++|.+++++.|+.... ..|. ...+.+..-+. .+... ......+
T Consensus 2 mkli~fDlDGTLl~-------e~~~~~a~~~Gi~~~~------~tgR~~~~~~~~~~~~v~------ll~~~-~~~~~~~ 61 (206)
T d1rkua_ 2 MEIACLDLEGVLVP-------EIWIAFAEKTGIDALK------ATTRDIPDYDVLMKQRLR------ILDEH-GLKLGDI 61 (206)
T ss_dssp CEEEEEESBTTTBC-------CHHHHHHHHHTCGGGG------CCTTTCCCHHHHHHHHHH------HHHHT-TCCHHHH
T ss_pred cEEEEEcCccchHH-------HHHHHHHHHcCCHHHH------HHCCCCCCHHHHHHHHHH------HHHhC-CCceehh
Confidence 58999999999997 2577888888874311 1121 11121111100 00000 0011111
Q ss_pred HHHHCCccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCC----CCCCCCCHHHHHHHHH
Q 043738 195 QALQGGIYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAED----VHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 195 ~~~~~~~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~----v~~~KP~~~~~~~~le 270 (368)
.... ......++...++..++ .+..++++|++...........++...++...+.... .....++.......++
T Consensus 62 ~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (206)
T d1rkua_ 62 QEVI-ATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVI 139 (206)
T ss_dssp HHHH-TTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHH
T ss_pred hhhh-hhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHH
Confidence 2222 23577889888888775 5799999999999999999998887765543332211 1123344556788889
Q ss_pred HcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEE-EcCchhhhHHHHhc
Q 043738 271 LLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLV-VRHLDELSVVDLKN 331 (368)
Q Consensus 271 ~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~v-v~sl~eL~~~~l~~ 331 (368)
++++++++|++|||+.||++|++.||++++| +. ........++++ ..+.+|+...+++.
T Consensus 140 ~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na-~~~v~~~~~~~~~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 140 AFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HA-PENVIREFPQFPAVHTYEDLKREFLKA 199 (206)
T ss_dssp HHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SC-CHHHHHHCTTSCEECSHHHHHHHHHHH
T ss_pred HhcccccceEEecCCccCHHHHHhCCccEEE-CC-CHHHHHhCCCceeecCHHHHHHHHHHH
Confidence 9999999999999999999999999998777 43 222222347885 47788987666654
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.49 E-value=7.5e-15 Score=121.47 Aligned_cols=103 Identities=12% Similarity=-0.037 Sum_probs=75.5
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH---HHHHHHHHcC------ccccccEEEeCCCCCCCCCCHHHHHHHHHHc
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK---TLETAIDSIG------IEEYFTAIVAAEDVHRGKPDPEMFVYAAQLL 272 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~---~~~~~l~~~g------l~~~Fd~iv~~e~v~~~KP~~~~~~~~le~l 272 (368)
..++||+.++|+.|++.|+.++++||.+.. .+...++..+ ....++...... ....+|+.......+..+
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQRE-QGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECC-TTCCSCHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeeccc-ccccCCchHHHHHHHHHh
Confidence 478999999999999999999999997632 2233333221 112344444443 344567778888888887
Q ss_pred CCCCCc-EEEEcCCHhhHHHHHHcCCeEEEEcCC
Q 043738 273 KFIPER-CIVFGNSNQTVEAAHDARMKCVAVASK 305 (368)
Q Consensus 273 gi~p~~-~l~IGDs~nDl~~A~~aG~~~I~v~~~ 305 (368)
..++.+ +++|||+..|++||+++|+.|+.|..+
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred ccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 776655 477899999999999999999999865
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.35 E-value=7.4e-13 Score=115.91 Aligned_cols=92 Identities=15% Similarity=0.108 Sum_probs=63.1
Q ss_pred ChHHHHHHHHHcCcccccc-EEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCC
Q 043738 229 PRKTLETAIDSIGIEEYFT-AIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHP 307 (368)
Q Consensus 229 ~~~~~~~~l~~~gl~~~Fd-~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~ 307 (368)
....++.++++++....+. .-...+....+.+|+..+..+++++|++++++++|||+.||++|++.+|+++++ ..+ .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav-~na-~ 197 (230)
T d1wr8a_ 120 NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV-AQA-P 197 (230)
T ss_dssp CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC-TTS-C
T ss_pred cHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEE-CCC-C
Confidence 3445566677665432111 000112245677889999999999999999999999999999999999976444 322 2
Q ss_pred ccccCCCcEEEcCch
Q 043738 308 VYELGAADLVVRHLD 322 (368)
Q Consensus 308 ~~~~~~ad~vv~sl~ 322 (368)
......|++|+++.+
T Consensus 198 ~~~k~~A~~v~~~~~ 212 (230)
T d1wr8a_ 198 KILKENADYVTKKEY 212 (230)
T ss_dssp HHHHTTCSEECSSCH
T ss_pred HHHHHhCCEEECCCC
Confidence 222345999998754
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.24 E-value=1.3e-11 Score=111.77 Aligned_cols=63 Identities=17% Similarity=0.023 Sum_probs=50.3
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 259 KPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 259 KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
-.|..+++.+++++|++++++++|||+.||++|++.+|..+++-+ ....-...|++++++.++
T Consensus 212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~n--a~~~~k~~A~~v~~~~~~ 274 (285)
T d1nrwa_ 212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGN--AREDIKSIADAVTLTNDE 274 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTT--CCHHHHHHCSEECCCGGG
T ss_pred chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCC--CCHHHHHhCCEEcCCCCc
Confidence 356899999999999999999999999999999999997665522 222223359999987663
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.21 E-value=5.1e-12 Score=111.19 Aligned_cols=65 Identities=15% Similarity=0.115 Sum_probs=49.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCch
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLD 322 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~ 322 (368)
+.+..|..+++.+++++|+++++|++|||+.||+.|++.+|+++++ .++ ...-...||+++++-.
T Consensus 147 ~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav-~na-~~~~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-ANA-TDNIKAVSDFVSDYSY 211 (225)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-TTS-CHHHHHHCSEECSCCT
T ss_pred CCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE-CCC-cHHHHHhCCEEECCCC
Confidence 3344568899999999999999999999999999999999976543 222 2222234899986665
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.17 E-value=1.5e-11 Score=110.59 Aligned_cols=77 Identities=12% Similarity=0.118 Sum_probs=57.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchhh-hHHHHhcccc
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDEL-SVVDLKNLAD 334 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~eL-~~~~l~~L~d 334 (368)
.+--|..+++.+++++|++++++++|||+.||++|++.+|.++++-++ ..++ ..|++++.+.++= ....+++|.+
T Consensus 187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na---~~~lk~~A~~v~~~~~~~Gva~~i~~~l~ 263 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNA---AENIKQIARYATDDNNHEGALNVIQAVLD 263 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTC---CHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred CchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCC---CHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence 344578999999999999999999999999999999999987665222 2333 3499999887642 2334555555
Q ss_pred cc
Q 043738 335 IE 336 (368)
Q Consensus 335 ~~ 336 (368)
.+
T Consensus 264 ~~ 265 (269)
T d1rlma_ 264 NT 265 (269)
T ss_dssp TC
T ss_pred cC
Confidence 44
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.16 E-value=4.9e-11 Score=107.21 Aligned_cols=61 Identities=15% Similarity=0.193 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcccc-CCCcEEEcCchh
Q 043738 260 PDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYEL-GAADLVVRHLDE 323 (368)
Q Consensus 260 P~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~-~~ad~vv~sl~e 323 (368)
-|..+++.++++++++++++++|||+.||++|++.+|..+++ ++...++ ..|++++++..+
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am---~na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV---DNAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHCSEECCCTTT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe---CCCCHHHHHhCCEEcCCCCc
Confidence 457889999999999999999999999999999999976554 2222333 348999987765
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.01 E-value=1.4e-10 Score=104.44 Aligned_cols=66 Identities=12% Similarity=0.208 Sum_probs=52.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
..+--|..+++.+++++|++++++++|||+.||++|++.+|..+++ ++....-...|++++++.++
T Consensus 186 ~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~--~na~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 186 PKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM--ENAIEKVKEASDIVTLTNND 251 (267)
T ss_dssp CTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC--TTSCHHHHHHCSEECCCTTT
T ss_pred CCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe--CCCCHHHHHhCCEEcCCCCc
Confidence 4455678999999999999999999999999999999999986544 22222223349999988775
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.96 E-value=3.4e-10 Score=97.48 Aligned_cols=96 Identities=14% Similarity=0.176 Sum_probs=76.9
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCC--------hH----HHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHH
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHP--------RK----TLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQ 270 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~--------~~----~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le 270 (368)
.++|++.+.|+.|.+.|+.++|+||.+ .. ....+++.++.. +...++...-...||++.++..+++
T Consensus 50 ~l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 50 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp ESCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred eccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence 457999999999999999999999952 22 234455555544 4555666666789999999999999
Q ss_pred HcC----CCCCcEEEEcCC-----------------HhhHHHHHHcCCeEE
Q 043738 271 LLK----FIPERCIVFGNS-----------------NQTVEAAHDARMKCV 300 (368)
Q Consensus 271 ~lg----i~p~~~l~IGDs-----------------~nDl~~A~~aG~~~I 300 (368)
+++ ++.++++||||. ..|++.|.++|+++.
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 975 889999999994 489999999999854
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.95 E-value=2.2e-09 Score=96.33 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=58.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCch--hhhHHHHhcccc
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLD--ELSVVDLKNLAD 334 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~--eL~~~~l~~L~d 334 (368)
.+.-+...+..++++++++++++++|||+.||+.|++.+|.++++ ..+ ...-...|++++.+-. ......++.+.+
T Consensus 204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~-~na-~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~ 281 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANA-TDSAKSHAKCVLPVSHREGAVAYLLKKVFD 281 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTC-CHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe-CCC-CHHHHHhCCEEECCcCCCcHHHHHHHHHHc
Confidence 445568999999999999999999999999999999999987554 222 2222234899996533 445677888777
Q ss_pred cc
Q 043738 335 IE 336 (368)
Q Consensus 335 ~~ 336 (368)
++
T Consensus 282 ~~ 283 (283)
T d2b30a1 282 LK 283 (283)
T ss_dssp TC
T ss_pred CC
Confidence 63
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.90 E-value=5.7e-10 Score=102.11 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=68.8
Q ss_pred ccccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEe-----CC---------CCCCCCCCHHHHH
Q 043738 201 IYRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVA-----AE---------DVHRGKPDPEMFV 266 (368)
Q Consensus 201 ~~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~-----~e---------~v~~~KP~~~~~~ 266 (368)
.+.+.||+.+|++.|+++|++++|+|++....++.+++++|+..---.|++ .+ ......-+.....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~ 212 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL 212 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchhh
Confidence 368999999999999999999999999999999999999987631112222 11 1112222234444
Q ss_pred HHHHHcC--CCCCcEEEEcCCHhhHHHHHHcC
Q 043738 267 YAAQLLK--FIPERCIVFGNSNQTVEAAHDAR 296 (368)
Q Consensus 267 ~~le~lg--i~p~~~l~IGDs~nDl~~A~~aG 296 (368)
....++. -...+++++|||.+|+.||..+.
T Consensus 213 ~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 213 KNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp TTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred hhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 4444333 35678999999999999998754
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.89 E-value=7.1e-09 Score=90.67 Aligned_cols=62 Identities=10% Similarity=0.005 Sum_probs=45.5
Q ss_pred CCCCHHHHHHHHHHcC-CCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhh
Q 043738 258 GKPDPEMFVYAAQLLK-FIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELS 325 (368)
Q Consensus 258 ~KP~~~~~~~~le~lg-i~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~ 325 (368)
+-.|..++..++++++ +.++++++|||+.||++|.+.+|.++++-+..+. ..-.+.++.|+.
T Consensus 177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~~------~~~~~~~i~~~~ 239 (243)
T d1wzca1 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHK------KAQNVSSIIDVL 239 (243)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCT------TCEEESCHHHHH
T ss_pred hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCCChH------HHhhhhHHHHHH
Confidence 3446788889999985 8899999999999999999999987666333222 122355666653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.84 E-value=1.1e-08 Score=88.67 Aligned_cols=43 Identities=5% Similarity=-0.022 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHH---HcCCCCCcEEEEcCCHhhHHHHHHcCCeEE
Q 043738 258 GKPDPEMFVYAAQ---LLKFIPERCIVFGNSNQTVEAAHDARMKCV 300 (368)
Q Consensus 258 ~KP~~~~~~~~le---~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I 300 (368)
+..|....+.+++ ++|++++++++|||+.||++|++.+|.+++
T Consensus 182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~va 227 (232)
T d1xvia_ 182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI 227 (232)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEE
T ss_pred CchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEE
Confidence 3345666666665 569999999999999999999999997543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.83 E-value=1.1e-09 Score=98.09 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=51.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchh
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDE 323 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~e 323 (368)
..+-.|..+++.+++++|++++++++|||+.||+.|.+.+|..+++ .++ ...-...|++++.+.++
T Consensus 182 p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav-~na-~~~lk~~A~~vt~~~~~ 247 (260)
T d2rbka1 182 AKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQA-KEDVKAAADYVTAPIDE 247 (260)
T ss_dssp STTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTS-CHHHHHHSSEECCCGGG
T ss_pred eCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe-CCC-CHHHHHhCCEEeCCCCc
Confidence 4445678999999999999999999999999999999999986544 322 22222348999987653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.82 E-value=7.2e-09 Score=89.48 Aligned_cols=93 Identities=15% Similarity=0.199 Sum_probs=67.3
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChH----HHHHHHHHcCcc--ccccEEEeCCCCCCCCCCHHHHHHHHHHcCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRK----TLETAIDSIGIE--EYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFI 275 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~----~~~~~l~~~gl~--~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~ 275 (368)
..+.||+.+|++.++++|++|+.|||.... .++.+.+.+|+. ...+.++...+- .|.. -+..++++++
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~--~K~~---rr~~Ik~y~I- 158 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP--GQNT---KSQWLQDKNI- 158 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT--TCCC---SHHHHHHTTE-
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC--CchH---HHHHHHHcCe-
Confidence 467899999999999999999999997533 334444557874 333455555432 2221 2333355665
Q ss_pred CCcEEEEcCCHhhHHHHHHcCCeEEEEc
Q 043738 276 PERCIVFGNSNQTVEAAHDARMKCVAVA 303 (368)
Q Consensus 276 p~~~l~IGDs~nDl~~A~~aG~~~I~v~ 303 (368)
++++||..+|+.+|.++|+++|.+-
T Consensus 159 ---~l~~GD~l~Df~aA~eagi~~iRi~ 183 (209)
T d2b82a1 159 ---RIFYGDSDNDITAARDVGARGIRIL 183 (209)
T ss_dssp ---EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred ---EEEecCCHHHHhHHHHcCCCceEee
Confidence 7999999999999999999999985
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.61 E-value=5.9e-08 Score=82.06 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=83.8
Q ss_pred HHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHH
Q 043738 211 FVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVE 290 (368)
Q Consensus 211 lL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~ 290 (368)
-++.|+..|+.++++|+.....+......+++...+ .. .+++...++.+++++++++++|+||||+.||++
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~----~~-----~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~ 110 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFF----LG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLP 110 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEE----ES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhhhcccccc----cc-----cccHHHHHHHHHHHhcCCcceeEEecCCccHHH
Confidence 467778899999999999989999988888765322 22 345678899999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCCccccCCCcEEEcC------chhhhHHHH
Q 043738 291 AAHDARMKCVAVASKHPVYELGAADLVVRH------LDELSVVDL 329 (368)
Q Consensus 291 ~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s------l~eL~~~~l 329 (368)
+.+.+|+.+++ ..........||+|+.+ +.|+...++
T Consensus 111 ~l~~~g~siap--~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il 153 (177)
T d1k1ea_ 111 AFAACGTSFAV--ADAPIYVKNAVDHVLSTHGGKGAFREMSDMIL 153 (177)
T ss_dssp HHHHSSEEEEC--TTSCHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHhhCCeEEEc--CCccHHHHHhCCEEeCCCCCCchHHHHHHHHH
Confidence 99999976554 33333334459999977 455555554
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.61 E-value=2.6e-07 Score=74.47 Aligned_cols=110 Identities=15% Similarity=0.188 Sum_probs=78.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIVF 282 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~I 282 (368)
.+.+++.+.++.|++.|++++++|+..........+.+|+..+| +. -.++-.....+.++-. ..++|+
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~----~~-------~~p~~k~~~v~~~q~~-~~v~~v 88 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVI----AE-------VLPHQKSEEVKKLQAK-EVVAFV 88 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEE----CS-------CCHHHHHHHHHHHTTT-SCEEEE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhc----cc-------cchhHHHHHHHHHHcC-CEEEEE
Confidence 68899999999999999999999999999999999999985433 21 1244445555555543 578999
Q ss_pred cCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEE--cCchhhhH
Q 043738 283 GNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVV--RHLDELSV 326 (368)
Q Consensus 283 GDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv--~sl~eL~~ 326 (368)
||+.||..+.+.++++..+ ..+ .......||+++ +++..++.
T Consensus 89 GDg~nD~~aL~~Advgia~-~~~-~~~~~~aADivl~~~~l~~i~~ 132 (135)
T d2b8ea1 89 GDGINDAPALAQADLGIAV-GSG-SDVAVESGDIVLIRDDLRDVVA 132 (135)
T ss_dssp ECSSSSHHHHHHSSEEEEE-CCC---------SEEESSCCTHHHHH
T ss_pred eCCCCcHHHHHhCCeeeec-Ccc-CHHHHHhCCEEEECCCHHHHHH
Confidence 9999999999999987544 322 222234589988 45666543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.54 E-value=9.8e-08 Score=83.87 Aligned_cols=45 Identities=16% Similarity=0.233 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEE
Q 043738 257 RGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVA 301 (368)
Q Consensus 257 ~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~ 301 (368)
.+.-|..+++.+++++|+++++|++|||+.||++|.+.+|..+++
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav 203 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV 203 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe
Confidence 344568899999999999999999999999999999999976544
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.32 E-value=1.1e-06 Score=74.66 Aligned_cols=113 Identities=9% Similarity=0.032 Sum_probs=73.6
Q ss_pred CccccCccHHHHHHHHHhCC-CcEEEEcCCChH------HHHHHHHH-cCccccccEEEeCCCCCCCCCCHHHHHHHHHH
Q 043738 200 GIYRLRTGSKEFVNILMHYK-IPMALVSTHPRK------TLETAIDS-IGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQL 271 (368)
Q Consensus 200 ~~~~~~pg~~elL~~Lk~~G-i~vaivSn~~~~------~~~~~l~~-~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~ 271 (368)
..++++||+.++++.|++.| +.+.++|..... .....+++ ++-..+...+++.+ |-
T Consensus 71 ~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~-----K~----------- 134 (195)
T d1q92a_ 71 FELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD-----KT----------- 134 (195)
T ss_dssp TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC-----ST-----------
T ss_pred hhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc-----cc-----------
Confidence 34799999999999999865 467777775422 22334444 33332233444432 20
Q ss_pred cCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCcc-ccCCCcEEEcCchhhhHHHHhc
Q 043738 272 LKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVY-ELGAADLVVRHLDELSVVDLKN 331 (368)
Q Consensus 272 lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~-~~~~ad~vv~sl~eL~~~~l~~ 331 (368)
.+.. -++|+|++..+..+.++|+++|.....+... .....-+.|.++.|+...+|.+
T Consensus 135 -~~~~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~~il~~ 192 (195)
T d1q92a_ 135 -VVSA--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDS 192 (195)
T ss_dssp -TSCC--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHHT
T ss_pred -eecC--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHHHHHhc
Confidence 1111 2899999999999999999999988555443 2222457899999987666554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=5e-07 Score=78.04 Aligned_cols=41 Identities=15% Similarity=0.046 Sum_probs=30.5
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcC----CHhhHHHHHHcCCeEEEEcC
Q 043738 261 DPEMFVYAAQLLKFIPERCIVFGN----SNQTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 261 ~~~~~~~~le~lgi~p~~~l~IGD----s~nDl~~A~~aG~~~I~v~~ 304 (368)
|..+++++ ++++++++++||| |.||++|.+.+|...+++++
T Consensus 186 Kg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 186 KRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp GGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred HHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 34455554 4678999999999 67999999999976666654
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.11 E-value=8.5e-05 Score=70.59 Aligned_cols=104 Identities=9% Similarity=0.051 Sum_probs=78.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-c--------CccccccEEEeCCC-----------------C
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDS-I--------GIEEYFTAIVAAED-----------------V 255 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~-~--------gl~~~Fd~iv~~e~-----------------v 255 (368)
+...|.+..+|+.|++.|.++.++||++-.++...+.. + .+.++||.||+... .
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~ 263 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 263 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence 35578899999999999999999999999998887774 3 47789999887521 0
Q ss_pred C-------CCCCC---HHHHHHHHHHcCCCCCcEEEEcCCH-hhHHHH-HHcCCeEEEEcCC
Q 043738 256 H-------RGKPD---PEMFVYAAQLLKFIPERCIVFGNSN-QTVEAA-HDARMKCVAVASK 305 (368)
Q Consensus 256 ~-------~~KP~---~~~~~~~le~lgi~p~~~l~IGDs~-nDl~~A-~~aG~~~I~v~~~ 305 (368)
+ ..++. .-....+.+.+|..-.++++|||+. .||-.. +..|+.+++|-..
T Consensus 264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 325 (458)
T d2bdea1 264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 325 (458)
T ss_dssp CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTT
T ss_pred CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHH
Confidence 0 00110 1115577788899989999999999 796655 4689999998743
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=1.1e-06 Score=75.54 Aligned_cols=44 Identities=23% Similarity=0.114 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCH----hhHHHHHHcCCeEEEEcC
Q 043738 258 GKPDPEMFVYAAQLLKFIPERCIVFGNSN----QTVEAAHDARMKCVAVAS 304 (368)
Q Consensus 258 ~KP~~~~~~~~le~lgi~p~~~l~IGDs~----nDl~~A~~aG~~~I~v~~ 304 (368)
+-.|..+++.+++ .+++++++|||+. ||++|.+.+|...++|.+
T Consensus 183 ~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 183 GWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred hccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 4445677777664 5889999999975 999999999965566553
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.05 E-value=9.1e-06 Score=67.58 Aligned_cols=124 Identities=11% Similarity=0.092 Sum_probs=82.2
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCcccccc----EEEeCCCC----------------CCCCCC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFT----AIVAAEDV----------------HRGKPD 261 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd----~iv~~e~v----------------~~~KP~ 261 (368)
.++.+++.+.++.|++.|++++++|+-.........+.+|+...-. ..+.+.+. ....-.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 3788999999999999999999999999999999999999853221 11221110 011122
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcC--chhhhHH
Q 043738 262 PEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRH--LDELSVV 327 (368)
Q Consensus 262 ~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~s--l~eL~~~ 327 (368)
|+--..+.+.++-.-..+.++||+.||..+.+.+.++..+ . ....-....||+++-+ |..+...
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~-~-~gt~~a~~aAdivl~~~~l~~v~~~ 164 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM-G-SGTAVAKTASEMVLADDNFSTIVAA 164 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-T-TSCHHHHHTCSEEETTCCTHHHHHH
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe-c-cccHHHHHhCCEEEccCCHHHHHHH
Confidence 3333344444433346799999999999999999976444 3 2222222358988754 5555433
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.27 E-value=0.00031 Score=54.83 Aligned_cols=49 Identities=8% Similarity=0.103 Sum_probs=39.9
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCC---------------hHHHHHHHHHcCccccccEEEeC
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHP---------------RKTLETAIDSIGIEEYFTAIVAA 252 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~---------------~~~~~~~l~~~gl~~~Fd~iv~~ 252 (368)
..|.+++.++|..|++.|..+.+.|... ...+...|+..|+. ||.++.+
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li~g 86 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEILVG 86 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEEEC
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEEEC
Confidence 3678999999999999999999999874 24567788888885 6877665
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.93 E-value=0.00076 Score=52.44 Aligned_cols=45 Identities=22% Similarity=0.129 Sum_probs=35.3
Q ss_pred ccCccHHHHHHHHHhCCCcEEEEcCCChHHH---HHHHHHcCccccccEE
Q 043738 203 RLRTGSKEFVNILMHYKIPMALVSTHPRKTL---ETAIDSIGIEEYFTAI 249 (368)
Q Consensus 203 ~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~---~~~l~~~gl~~~Fd~i 249 (368)
.+.+++.++|+.|++.|..+++.|....... ..++.+.|+. |+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i 68 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAA 68 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceeh
Confidence 5789999999999999999999999876554 4455666665 5554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.85 E-value=0.00072 Score=56.84 Aligned_cols=70 Identities=13% Similarity=0.002 Sum_probs=49.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHcCCeEEEEcCCCCccccCCCcEEEcCchhhhHHHHhccccc
Q 043738 256 HRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPVYELGAADLVVRHLDELSVVDLKNLADI 335 (368)
Q Consensus 256 ~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~aG~~~I~v~~~~~~~~~~~ad~vv~sl~eL~~~~l~~L~d~ 335 (368)
..+--|..+++.++++ +++++|||+.||+.|.+.+|..+.+..+.. ...|++.+++.+|+ ..+|+.|..+
T Consensus 155 p~g~~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~~~~~~av~~g~~----~~~A~~~~~~~~ev-~~~l~~l~~~ 224 (229)
T d1u02a_ 155 VPGVNKGSAIRSVRGE-----RPAIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEM-RKILKFIEML 224 (229)
T ss_dssp CTTCCHHHHHHHHHTT-----SCEEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHH-HHHHHHHHHH
T ss_pred cCCCCHHHHHHHHhcc-----ccceeecCCCChHHHHhccCCeEEEEeCCC----CccCeEEcCCHHHH-HHHHHHHHHH
Confidence 3445557777777653 689999999999999999987643332322 13589999999996 4466666443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.84 E-value=0.0013 Score=56.52 Aligned_cols=122 Identities=16% Similarity=0.146 Sum_probs=84.7
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCC----------------------------
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAE---------------------------- 253 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e---------------------------- 253 (368)
..+.||+.+.++.+.+. .+.+|+|++-..+++.+.++.|+. +. +++.+
T Consensus 80 ~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ 155 (308)
T d1y8aa1 80 AKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--GE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSG 155 (308)
T ss_dssp CCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred eeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--ce-eecccccccccCCChHHHHHHHHHhhhccCccH
Confidence 68899999999999987 899999999999999999999874 33 22211
Q ss_pred ------------------------CCCCCCCCHHHHHHHHHHcCCCCCcEEEEcCCHhhHHHHHHc---CCeEEEEcCCC
Q 043738 254 ------------------------DVHRGKPDPEMFVYAAQLLKFIPERCIVFGNSNQTVEAAHDA---RMKCVAVASKH 306 (368)
Q Consensus 254 ------------------------~v~~~KP~~~~~~~~le~lgi~p~~~l~IGDs~nDl~~A~~a---G~~~I~v~~~~ 306 (368)
.++- --+..+.+..++..++++. ++||||.+|++|.+.+ |--.|..+|+
T Consensus 156 eel~e~~d~~f~~~e~~~i~e~Vk~VGg-g~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~~r~~gGlaIsFNGN- 231 (308)
T d1y8aa1 156 EELFRKLDELFSRSEVRKIVESVKAVGA-GEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEAARGLGGVAIAFNGN- 231 (308)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHTCBCCCH-HHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHHHHHTTCEEEEESCC-
T ss_pred HHHHHHHHHHhccchHhhHHhhhcccCC-chhHHHHHhhcccccCCcc--eeccCccccHHHHHHHhcCCCeeEEecCc-
Confidence 0110 1123445566677788765 9999999999988876 3324444443
Q ss_pred CccccCCCcEEEcCchhhhHHHHhcc
Q 043738 307 PVYELGAADLVVRHLDELSVVDLKNL 332 (368)
Q Consensus 307 ~~~~~~~ad~vv~sl~eL~~~~l~~L 332 (368)
.+.+..|+..|-+-+.+....+-.|
T Consensus 232 -~Yal~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 232 -EYALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp -HHHHTTCSEEEECSSTHHHHHHHHH
T ss_pred -cccccccceEEeccchhHHHHHHHH
Confidence 4566678888877666655554443
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.74 E-value=0.0045 Score=51.22 Aligned_cols=86 Identities=16% Similarity=0.087 Sum_probs=64.6
Q ss_pred cccCccHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCccccccEEEeCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 043738 202 YRLRTGSKEFVNILMHYKIPMALVSTHPRKTLETAIDSIGIEEYFTAIVAAEDVHRGKPDPEMFVYAAQLLKFIPERCIV 281 (368)
Q Consensus 202 ~~~~pg~~elL~~Lk~~Gi~vaivSn~~~~~~~~~l~~~gl~~~Fd~iv~~e~v~~~KP~~~~~~~~le~lgi~p~~~l~ 281 (368)
+...||+.+||+.+.+. +.++|.|.+...+++.+++.+.-...|...+..+.....+. .+..-+..+|-+.++++.
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~~~---~~~KdL~~l~~~l~~vvi 129 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRG---NYVKDLSRLGRDLRRVLI 129 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEETT---EEECCGGGSCSCGGGEEE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeecCC---cccccHhhcCCCHHHeEE
Confidence 57799999999999987 99999999999999999999877666666555433211111 022334567888899999
Q ss_pred EcCCHhhHHH
Q 043738 282 FGNSNQTVEA 291 (368)
Q Consensus 282 IGDs~nDl~~ 291 (368)
|+|+..-...
T Consensus 130 vDd~~~~~~~ 139 (181)
T d1ta0a_ 130 LDNSPASYVF 139 (181)
T ss_dssp ECSCGGGGTT
T ss_pred EcCChhhhhc
Confidence 9999876543
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=89.72 E-value=0.061 Score=44.21 Aligned_cols=12 Identities=8% Similarity=0.537 Sum_probs=11.0
Q ss_pred EEEEeccCcccc
Q 043738 120 GAIFEWEGVIIE 131 (368)
Q Consensus 120 ~VIFDlDGTLid 131 (368)
+|+||+||||++
T Consensus 2 Li~~DlDGTL~~ 13 (229)
T d1u02a_ 2 LIFLDYDGTLVP 13 (229)
T ss_dssp EEEEECBTTTBC
T ss_pred EEEEEecCCCCC
Confidence 689999999996
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=84.43 E-value=0.14 Score=41.51 Aligned_cols=17 Identities=18% Similarity=0.231 Sum_probs=14.7
Q ss_pred CceEEEEeccCccccCc
Q 043738 117 GWLGAIFEWEGVIIEDN 133 (368)
Q Consensus 117 ~ik~VIFDlDGTLid~~ 133 (368)
.+|++|||+||||+|..
T Consensus 4 ~ik~~i~DvDGVlTDG~ 20 (177)
T d1k1ea_ 4 NIKFVITDVDGVLTDGQ 20 (177)
T ss_dssp GCCEEEEECTTTTSCSE
T ss_pred cCeEEEEccCCcccCCe
Confidence 47999999999999753
|