Citrus Sinensis ID: 043744

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
MEKLVSIWSKDQQYLPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDYISNPTRRNQ
cHHHHHHHHccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHccccccccEEEEEcccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccEEcEEEccccccccccccccccccccccEEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEccccccEEEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHcccccccc
cHHHHHHHHcccccccHHcccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEccccccccccccHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccEEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHcccccccccccccHHHHHHHHHHccccccc
MEKLVSIWSKdqqylpenyifppetrpgksiiplcttipvidlskasdqnrSNTIQQILKASKEFgffqvikhevppklinDTMDVFKEffdmpaedkvsfysenpsktcklytsslsydreeIHLWRdnlrhpchpleecmklwpekptryREVVGAYSNEAKKLGSIILELIAEGlglesgyfrNQLSESLLLSinhyppcpnpsltlglvkhrdpnlITILLQGdvcglqvlkdgewigveplpnafVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAAlfinpandcvieptktlteasnppiyrAFQYQEFLMDyisnptrrnq
meklvsiwskdqqylpeNYIFPPETRPGKSIIPLCTTIPVIDlskasdqnRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKvsfysenpsktcKLYTSSLSYDREEIHLWRDNLRHPCHPLEEcmklwpekpTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPtktlteasnppIYRAFQYQEFLMDYIsnptrrnq
MEKLVSIWSKDQQYLPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKlgsiileliaeglglesgYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDYISNPTRRNQ
*****SIWSKDQQYLPENYIFPPETRPGKSIIPLCTTIPVIDLS*********TIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEH**********TSAALFINPANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDYI********
*EKLVS*W***QQYLPENYIFPPE***********TTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSF**********LYTSSLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDY**N******
MEKLVSIWSKDQQYLPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDYISNPTRRNQ
*****S*****QQYLPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDYISNPT****
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MEKLVSIWSKDQQYLPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDYISNPTRRNQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query332 2.2.26 [Sep-21-2011]
P24397344 Hyoscyamine 6-dioxygenase N/A no 0.957 0.924 0.439 3e-72
Q40062339 2'-deoxymugineic-acid 2'- N/A no 0.903 0.884 0.418 8e-68
Q40061338 Mugineic-acid 3-dioxygena N/A no 0.930 0.914 0.406 6e-62
Q96330336 Flavonol synthase/flavano no no 0.840 0.830 0.350 7e-49
Q84MB3365 1-aminocyclopropane-1-car no no 0.855 0.778 0.381 6e-48
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.909 0.901 0.338 7e-48
Q07512348 Flavonol synthase/flavano N/A no 0.930 0.887 0.345 1e-46
Q41452349 Flavonol synthase/flavano N/A no 0.909 0.865 0.339 6e-46
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 0.864 0.779 0.341 1e-45
Q05964365 Naringenin,2-oxoglutarate N/A no 0.876 0.797 0.347 2e-45
>sp|P24397|HY6H_HYONI Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1 Back     alignment and function desciption
 Score =  272 bits (695), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 148/337 (43%), Positives = 201/337 (59%), Gaps = 19/337 (5%)

Query: 1   MEKLVSIWSKDQQYLPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILK 60
           M   VS WS   + + E++I P + R  K + P+   +P+IDL     Q+    +QQI K
Sbjct: 1   MATFVSNWST--KSVSESFIAPLQKRAEKDV-PVGNDVPIIDLQ----QHHHLLVQQITK 53

Query: 61  ASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPS--------KTCKL 112
           A ++FG FQVI H  P +L+ +TM+V KEFF +PAE+K  F  +  +        +  KL
Sbjct: 54  ACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKL 113

Query: 113 YTSSLSYDREEIHLWRDNLRHPCHPLEE-CMKLWPEKPTRYREVVGAYSNEAKKLGSIIL 171
           Y        EE   W+D L H CHPL++  +  WPEKP +YREVV  YS E +KL   +L
Sbjct: 114 YVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRML 173

Query: 172 ELIAEGLGLESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCG 231
           + I EGLGL+ GYF N+LS+  ++  N+YPPCP+PS TLG   H D NLIT LLQ D+ G
Sbjct: 174 DYICEGLGLKLGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLIT-LLQQDLPG 232

Query: 232 LQ--VLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFIN 289
           LQ  ++KD  WI V+P+P AFV+N+G  L+VI+N K +   HR VT+    R S A  I 
Sbjct: 233 LQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIG 292

Query: 290 PANDCVIEPTKTLTEASNPPIYRAFQYQEFLMDYISN 326
           P   C IEP K L    NPP+Y+ + Y EF   Y+S+
Sbjct: 293 PDYSCTIEPAKELLNQDNPPLYKPYSYSEFADIYLSD 329

Hyoscyamus niger (taxid: 4079)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 1
>sp|Q40062|IDS3_HORVU 2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3 Back     alignment and function description
>sp|Q40061|IDS2_HORVU Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1 Back     alignment and function description
>sp|Q96330|FLS1_ARATH Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description
>sp|Q41452|FLS_SOLTU Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function description
>sp|Q05964|FL3H_DIACA Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
224066261341 predicted protein [Populus trichocarpa] 0.975 0.950 0.659 1e-124
224066259341 predicted protein [Populus trichocarpa] 0.975 0.950 0.647 1e-121
225437856341 PREDICTED: hyoscyamine 6-dioxygenase [Vi 0.978 0.953 0.633 1e-121
224082794345 predicted protein [Populus trichocarpa] 0.978 0.942 0.643 1e-121
255583202333 1-aminocyclopropane-1-carboxylate oxidas 0.957 0.954 0.636 1e-117
359480009339 PREDICTED: LOW QUALITY PROTEIN: hyoscyam 0.966 0.946 0.605 1e-117
356536832341 PREDICTED: hyoscyamine 6-dioxygenase-lik 0.936 0.912 0.610 1e-115
388507730344 unknown [Medicago truncatula] 0.972 0.938 0.590 1e-109
224123992327 predicted protein [Populus trichocarpa] 0.972 0.987 0.621 1e-109
449458500341 PREDICTED: hyoscyamine 6-dioxygenase-lik 0.954 0.929 0.521 3e-96
>gi|224066261|ref|XP_002302052.1| predicted protein [Populus trichocarpa] gi|222843778|gb|EEE81325.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 215/326 (65%), Positives = 255/326 (78%), Gaps = 2/326 (0%)

Query: 1   MEKLVSIWSKDQQYLPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILK 60
           ME LVS    + Q L E YIFP E RPGK  I LC +IPVIDL   + QNR+N  Q+ILK
Sbjct: 1   MEILVSSRC-NLQSLSEKYIFPEEIRPGKVAIALCESIPVIDLGDIAGQNRANIAQEILK 59

Query: 61  ASKEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYD 120
           AS+EFGFFQVI H V  +L+NDTM VFKE F+MPAED    YSE+P ++C+L+TSS SY 
Sbjct: 60  ASQEFGFFQVINHGVSKELMNDTMSVFKEVFEMPAEDLAGIYSEDPDRSCRLFTSSNSYA 119

Query: 121 REEIHLWRDNLRHPCHP-LEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLG 179
            E++H WRD LRHPCHP L+ C++ WPEKPTRYR+VVG YS E  KL S ILELI EGLG
Sbjct: 120 SEDVHNWRDFLRHPCHPDLDACIQQWPEKPTRYRQVVGNYSTEVMKLASGILELITEGLG 179

Query: 180 LESGYFRNQLSESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGE 239
           LESGYF  +LSE+  LS+N YPPCP+PSLTLGL KH DPNLITILLQGDVCGLQV KDGE
Sbjct: 180 LESGYFGGKLSENAFLSVNRYPPCPDPSLTLGLPKHCDPNLITILLQGDVCGLQVFKDGE 239

Query: 240 WIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPT 299
           WIGV P+PNAFVINIGY LQ+ISNNKLK  EHRAVTNSK+ARTSAA F++P+ D ++EP 
Sbjct: 240 WIGVGPVPNAFVINIGYQLQIISNNKLKGAEHRAVTNSKDARTSAAFFVSPSRDSIVEPA 299

Query: 300 KTLTEASNPPIYRAFQYQEFLMDYIS 325
           + L +  N P+YRAF++ EF  +Y++
Sbjct: 300 RELIKEDNRPLYRAFEFTEFFSNYMN 325

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224066259|ref|XP_002302051.1| predicted protein [Populus trichocarpa] gi|222843777|gb|EEE81324.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225437856|ref|XP_002264085.1| PREDICTED: hyoscyamine 6-dioxygenase [Vitis vinifera] gi|297744130|emb|CBI37100.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224082794|ref|XP_002306841.1| predicted protein [Populus trichocarpa] gi|222856290|gb|EEE93837.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255583202|ref|XP_002532366.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223527922|gb|EEF30009.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359480009|ref|XP_003632389.1| PREDICTED: LOW QUALITY PROTEIN: hyoscyamine 6-dioxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356536832|ref|XP_003536937.1| PREDICTED: hyoscyamine 6-dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|388507730|gb|AFK41931.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|224123992|ref|XP_002330260.1| predicted protein [Populus trichocarpa] gi|222871716|gb|EEF08847.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449458500|ref|XP_004146985.1| PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis sativus] gi|449518372|ref|XP_004166216.1| PREDICTED: hyoscyamine 6-dioxygenase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query332
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.957 0.932 0.423 2e-63
UNIPROTKB|Q40062339 IDS3 "2'-deoxymugineic-acid 2' 0.909 0.890 0.401 1.9e-58
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.948 0.905 0.393 2.2e-57
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.918 0.873 0.385 2.2e-57
TAIR|locus:2042356357 AT2G44800 [Arabidopsis thalian 0.927 0.862 0.352 2.5e-49
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.945 0.846 0.363 1.2e-47
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.864 0.788 0.377 2e-47
TAIR|locus:2081962357 AT3G60290 [Arabidopsis thalian 0.924 0.859 0.351 1e-45
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.930 0.844 0.333 2.7e-45
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.948 0.867 0.345 6.4e-44
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 139/328 (42%), Positives = 191/328 (58%)

Query:     3 KLVSIWSKDQQYLPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILKAS 62
             KL+S   +    LPENY+ P   RP  S +      P+IDLS     +RS  IQQI +A 
Sbjct:     4 KLISTGFRHTT-LPENYVRPISDRPRLSEVSQLEDFPLIDLSST---DRSFLIQQIHQAC 59

Query:    63 KEFGFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDRE 122
               FGFFQVI H V  ++I++ + V +EFF M  E+K+  YS++P+KT +L TS  +  +E
Sbjct:    60 ARFGFFQVINHGVNKQIIDEMVSVAREFFSMSMEEKMKLYSDDPTKTTRLSTS-FNVKKE 118

Query:   123 EIHLWRDNLRHPCHPLEECMKLWPEKPTRYREVVGAYSNEAKKXXXXXXXXXXXXXXXXX 182
             E++ WRD LR  C+P+ + +  WP  P  ++E+V  YS E ++                 
Sbjct:   119 EVNNWRDYLRLHCYPIHKYVNEWPSNPPSFKEIVSKYSREVREVGFKIEELISESLGLEK 178

Query:   183 XYFRNQLSES-LLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGD-VCGLQVLKDGEW 240
              Y +  L E    +++N+YPPCP P LT GL  H DPN +TILLQ   VCGLQ+L DG+W
Sbjct:   179 DYMKKVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDTTVCGLQILIDGQW 238

Query:   241 IGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTK 300
               V P P+AFVINIG  LQ +SN   KSV HRAVTN++  R S A F+ PA+  V+ P K
Sbjct:   239 FAVNPHPDAFVINIGDQLQALSNGVYKSVWHRAVTNTENPRLSVASFLCPADCAVMSPAK 298

Query:   301 TLTEASNP---PIYRAFQYQEFLMDYIS 325
              L EA +    P+Y+ F Y E+   + S
Sbjct:   299 PLWEAEDDETKPVYKDFTYAEYYKKFWS 326
GO:0005737 "cytoplasm" evidence=ISM
GO:0009813 "flavonoid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009617 "response to bacterium" evidence=IGI;RCA
GO:0009620 "response to fungus" evidence=IEP;IGI
GO:0000165 "MAPK cascade" evidence=RCA
GO:0001666 "response to hypoxia" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0045087 "innate immune response" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
UNIPROTKB|Q40062 IDS3 "2'-deoxymugineic-acid 2'-dioxygenase" [Hordeum vulgare (taxid:4513)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042356 AT2G44800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081962 AT3G60290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.921
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-112
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-88
PLN02947374 PLN02947, PLN02947, oxidoreductase 9e-79
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 4e-78
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-71
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 2e-67
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-67
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-66
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 4e-63
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-62
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 7e-61
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-54
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-52
PLN02216357 PLN02216, PLN02216, protein SRG1 4e-51
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-49
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-47
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-47
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 8e-44
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 6e-39
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-38
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 5e-36
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 7e-34
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-33
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 6e-33
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-32
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-25
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 2e-19
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 5e-10
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  328 bits (843), Expect = e-112
 Identities = 142/307 (46%), Positives = 193/307 (62%), Gaps = 6/307 (1%)

Query: 15  LPENYIFPPETRPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHE 74
           LPE+Y+ P   RP  S +  C  +PVIDL      +R+  +QQI  A + +GFFQVI H 
Sbjct: 15  LPESYVRPESERPRLSEVSTCENVPVIDLGS---PDRAQVVQQIGDACRRYGFFQVINHG 71

Query: 75  VPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHP 134
           V  +L+   + V  EFF +P E+K+  YS++P+KT +L TS  +  +E++H WRD LR  
Sbjct: 72  VSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTS-FNVRKEKVHNWRDYLRLH 130

Query: 135 CHPLEECMKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLSES-L 193
           C+PL++ +  WP  P  ++E+V  Y  E ++LG  + E I+E LGLE  Y +N L E   
Sbjct: 131 CYPLDKYVPEWPSNPPSFKEIVSTYCREVRELGFRLQEAISESLGLEKDYIKNVLGEQGQ 190

Query: 194 LLSINHYPPCPNPSLTLGLVKHRDPNLITILLQG-DVCGLQVLKDGEWIGVEPLPNAFVI 252
            +++N+YPPCP P LT GL  H DPN +TILLQ   V GLQVLKDG+W+ V P P AFVI
Sbjct: 191 HMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVAVNPHPGAFVI 250

Query: 253 NIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIYR 312
           NIG  LQ +SN + KSV HRAV N+ + R S A F+ P +D VI P K LT+     +YR
Sbjct: 251 NIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYR 310

Query: 313 AFQYQEF 319
            F Y E+
Sbjct: 311 DFTYAEY 317

Length = 337
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 332
PLN02947374 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.93
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.89
PLN03176120 flavanone-3-hydroxylase; Provisional 99.85
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.98
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.84
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.45
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 95.01
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 84.87
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=5.4e-82  Score=595.09  Aligned_cols=327  Identities=34%  Similarity=0.666  Sum_probs=285.6

Q ss_pred             ChhhhcccCCcCCCCCCCCCCCCCCCCCCCC---C--CCCCCccEEeCCCCCCCChHHHHHHHHHHhhhcceEEEEcCCC
Q 043744            1 MEKLVSIWSKDQQYLPENYIFPPETRPGKSI---I--PLCTTIPVIDLSKASDQNRSNTIQQILKASKEFGFFQVIKHEV   75 (332)
Q Consensus         1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~--~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi   75 (332)
                      |+.|++.|   ++.||..|++|++++|....   .  ....+||||||+.+.+.++.+++++|.+||++||||||+||||
T Consensus        28 v~~l~~~~---~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI  104 (374)
T PLN02947         28 VKHLCDSG---ITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGV  104 (374)
T ss_pred             HHHHHhcC---CCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCC
Confidence            56788888   78999999999988875321   0  1345799999998753457889999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhcCCChhhhhccccCCCCCCccccccCCCCCccccccccccccCCCCCccccccCCCCCCcchHHH
Q 043744           76 PPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLEECMKLWPEKPTRYREV  155 (332)
Q Consensus        76 ~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~y~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~wP~~~~~fr~~  155 (332)
                      +.++++++++.+++||+||.|+|+++.........| |+...........+|+|.+.+...|.....|.||+.+++||+.
T Consensus       105 p~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~g-yg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~~~~~fr~~  183 (374)
T PLN02947        105 PSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVR-YGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKV  183 (374)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCee-eccccccccccccCceeceeeecCCcccccccCccchHHHHHH
Confidence            999999999999999999999999986543222334 4433333334567899998877666654578999989999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCC---chhhhhhc-CCcceeEeeecCCCCCCCCCccccCCcCCCCeEEEeeCCcCC
Q 043744          156 VGAYSNEAKKLGSIILELIAEGLGLE---SGYFRNQL-SESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCG  231 (332)
Q Consensus       156 ~~~y~~~~~~l~~~ll~~l~~~Lgl~---~~~~~~~~-~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~G  231 (332)
                      +++|+++|.+|+.+|+++|+++||++   .++|.+.+ ...+.+|+||||+|++++..+|+++|||+|+||||+||+++|
T Consensus       184 ~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~G  263 (374)
T PLN02947        184 AATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEG  263 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCCCC
Confidence            99999999999999999999999997   45666666 667899999999999988899999999999999999999999


Q ss_pred             eeEeeCCeEEEccCCCCeEEEEcchHHHHhcCCcccCcCceeecCCCCCceEEEeeeCCCCCceeecCccccCCCCCCCC
Q 043744          232 LQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVIEPTKTLTEASNPPIY  311 (332)
Q Consensus       232 LqV~~~g~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y  311 (332)
                      |||+++|+|++|+|+||++|||+||+||+||||+|||++|||+.++.++||||+||++|+.|++|.|+++|+++++|++|
T Consensus       264 LQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~lv~~~~p~~Y  343 (374)
T PLN02947        264 LQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPELVDEQNPRRY  343 (374)
T ss_pred             eeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcC
Confidence            99999999999999999999999999999999999999999998888899999999999999999999999999999999


Q ss_pred             CCcCHHHHHHHHhcCCCCCC
Q 043744          312 RAFQYQEFLMDYISNPTRRN  331 (332)
Q Consensus       312 ~~~t~~e~~~~~~~~~~~~~  331 (332)
                      +++||+||++.+.++....+
T Consensus       344 ~~~~~~ey~~~~~~~~~~~~  363 (374)
T PLN02947        344 MDTDFATFLAYLASAEGKHK  363 (374)
T ss_pred             CCCCHHHHHHHHHHhccCch
Confidence            99999999999887766543

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-33
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-33
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-32
1w9y_A319 The Structure Of Acc Oxidase Length = 319 8e-30
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 4e-17
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-09
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 1e-06
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 1e-06
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  137 bits (346), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 15/309 (4%)
Query: 15  LPENYIFPPET---------RPGKSIIPLCTTIPVIDLSKASDQNRSNTIQQILKASKEF 65
           +P+ YI P E             K   P   TI + ++    ++ R N I+++ KAS ++
Sbjct: 17  IPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDW 76
Query: 66  GFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIH 125
           G   +I H +P  L+       +EFF +  E+K  + ++  +   + Y S L+ +     
Sbjct: 77  GVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQL 136
Query: 126 LWRDNLRHPCHPLEEC-MKLWPEKPTRYREVVGAYSNEAKKXXXXXXXXXXXXXXXXXXY 184
            W D   H  +P E+  + +WP+ P+ Y E    Y+   +                    
Sbjct: 137 EWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDR 196
Query: 185 FRNQLS--ESLLLS--INHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEW 240
              ++   E LLL   IN+YP CP P L LG+  H D + +T +L   V GLQ+  +G+W
Sbjct: 197 LEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKW 256
Query: 241 IGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPAND-CVIEPT 299
           +  + +P++ V++IG  L+++SN K KS+ HR + N ++ R S A+F  P  D  V++P 
Sbjct: 257 VTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL 316
Query: 300 KTLTEASNP 308
             +    +P
Sbjct: 317 PEMVSVESP 325
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query332
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-136
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-125
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-82
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 8e-79
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 5e-77
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 7e-75
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  390 bits (1004), Expect = e-136
 Identities = 89/321 (27%), Positives = 161/321 (50%), Gaps = 15/321 (4%)

Query: 15  LPENYIFPPETRPGKSIIPLCTT------IPVIDLSK---ASDQNRSNTIQQILKASKEF 65
           +P+ YI P E     + + L         +P IDL       ++ R N I+++ KAS ++
Sbjct: 18  IPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDW 77

Query: 66  GFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIH 125
           G   +I H +P  L+       +EFF +  E+K  + ++  +   + Y S L+ +     
Sbjct: 78  GVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQL 137

Query: 126 LWRDNLRHPCHPLEEC-MKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGY 184
            W D   H  +P E+  + +WP+ P+ Y E    Y+   + L + + + ++ GLGLE   
Sbjct: 138 EWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDR 197

Query: 185 FRNQLSES----LLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEW 240
              ++       L + IN+YP CP P L LG+  H D + +T +L   V GLQ+  +G+W
Sbjct: 198 LEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKW 257

Query: 241 IGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPAND-CVIEPT 299
           +  + +P++ V++IG  L+++SN K KS+ HR + N ++ R S A+F  P  D  V++P 
Sbjct: 258 VTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL 317

Query: 300 KTLTEASNPPIYRAFQYQEFL 320
             +    +P  +    + + +
Sbjct: 318 PEMVSVESPAKFPPRTFAQHI 338
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.89
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.78
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 91.47
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 91.05
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 90.8
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 86.88
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 85.02
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 83.12
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1e-81  Score=592.16  Aligned_cols=325  Identities=28%  Similarity=0.524  Sum_probs=286.0

Q ss_pred             ChhhhcccCCcCCCCCCCCCCCCCCCCCCCC---CC---CCCCccEEeCCCCCCC---ChHHHHHHHHHHhhhcceEEEE
Q 043744            1 MEKLVSIWSKDQQYLPENYIFPPETRPGKSI---IP---LCTTIPVIDLSKASDQ---NRSNTIQQILKASKEFGFFQVI   71 (332)
Q Consensus         1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~---~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~   71 (332)
                      |++|+++|   ++.||++|++|+++++....   ..   ...+||||||+.+..+   ++.+++++|.+||++||||||+
T Consensus         7 v~~l~~~~---~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            7 VESLAKSG---IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             HHHHHHTT---CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHhcC---CCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            57899988   78999999999887765321   00   0236999999987522   2567899999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhcCCChhhhhccccCCCCCCccccccCCCCCccccccccccccCCCCCcc-ccccCCCCCCc
Q 043744           72 KHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPLE-ECMKLWPEKPT  150 (332)
Q Consensus        72 nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~y~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP~~~~  150 (332)
                      ||||+.++++++++.+++||+||.|+|+++.........+||+........+..||+|+|+++..|.. ..+|.||+.++
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            99999999999999999999999999999976542123455565444444567899999998765542 34789999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhhcC----CcceeEeeecCCCCCCCCCccccCCcCCCCeEEEee
Q 043744          151 RYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQLS----ESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQ  226 (332)
Q Consensus       151 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~----~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  226 (332)
                      +||+.+++|+++|.+|+.+|+++|+++||+++++|.+.+.    +.+.||++|||+|++++..+|+++|||+|+||||+|
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q  243 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  243 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE
Confidence            9999999999999999999999999999999999998883    577899999999999888899999999999999999


Q ss_pred             CCcCCeeEeeCCeEEEccCCCCeEEEEcchHHHHhcCCcccCcCceeecCCCCCceEEEeeeCCCCCc-eeecCccccCC
Q 043744          227 GDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDC-VIEPTKTLTEA  305 (332)
Q Consensus       227 d~~~GLqV~~~g~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~p~~~~~~~  305 (332)
                      |+++||||+++|+|++|+|+||++||||||+||+||||+|||++|||+.+++.+|||++||++|+.|+ +|+|+++|+++
T Consensus       244 d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~  323 (356)
T 1gp6_A          244 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV  323 (356)
T ss_dssp             CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred             cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCC
Confidence            99999999999999999999999999999999999999999999999998888999999999999999 99999999999


Q ss_pred             CCCCCCCCcCHHHHHHHHhcCCC
Q 043744          306 SNPPIYRAFQYQEFLMDYISNPT  328 (332)
Q Consensus       306 ~~~~~y~~~t~~e~~~~~~~~~~  328 (332)
                      ++|++|+++||+||++.++.+++
T Consensus       324 ~~p~~y~~~t~~eyl~~~~~~~~  346 (356)
T 1gp6_A          324 ESPAKFPPRTFAQHIEHKLFGKE  346 (356)
T ss_dssp             SSCCSSCCEEHHHHHHHHHHHHH
T ss_pred             CCCccCCCccHHHHHHHHHHhcc
Confidence            99999999999999999887654
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 332
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-66
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-60
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-51
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-42
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  211 bits (537), Expect = 1e-66
 Identities = 88/321 (27%), Positives = 161/321 (50%), Gaps = 15/321 (4%)

Query: 15  LPENYIFPPETRPGKSIIPLCTT------IPVIDLSK---ASDQNRSNTIQQILKASKEF 65
           +P+ YI P E     + + L         +P IDL       ++ R N I+++ KAS ++
Sbjct: 17  IPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDW 76

Query: 66  GFFQVIKHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIH 125
           G   +I H +P  L+       +EFF +  E+K  + ++  +   + Y S L+ +     
Sbjct: 77  GVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQL 136

Query: 126 LWRDNLRHPCHPLEEC-MKLWPEKPTRYREVVGAYSNEAKKLGSIILELIAEGLGLESGY 184
            W D   H  +P E+  + +WP+ P+ Y E    Y+   + L + + + ++ GLGLE   
Sbjct: 137 EWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDR 196

Query: 185 FRNQLSES----LLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQGDVCGLQVLKDGEW 240
              ++       L + IN+YP CP P L LG+  H D + +T +L   V GLQ+  +G+W
Sbjct: 197 LEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKW 256

Query: 241 IGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVI-EPT 299
           +  + +P++ V++IG  L+++SN K KS+ HR + N ++ R S A+F  P  D ++ +P 
Sbjct: 257 VTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL 316

Query: 300 KTLTEASNPPIYRAFQYQEFL 320
             +    +P  +    + + +
Sbjct: 317 PEMVSVESPAKFPPRTFAQHI 337
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query332
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 90.11
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.9e-79  Score=573.92  Aligned_cols=324  Identities=27%  Similarity=0.523  Sum_probs=280.5

Q ss_pred             ChhhhcccCCcCCCCCCCCCCCCCCCCCCCC------CCCCCCccEEeCCCCCCC---ChHHHHHHHHHHhhhcceEEEE
Q 043744            1 MEKLVSIWSKDQQYLPENYIFPPETRPGKSI------IPLCTTIPVIDLSKASDQ---NRSNTIQQILKASKEFGFFQVI   71 (332)
Q Consensus         1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~------~~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~   71 (332)
                      |++||++|   +++||+.|++|+.++|....      .....+||||||+.+..+   .+.+++++|.+||+++|||||+
T Consensus         6 ~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           6 VESLAKSG---IISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             HHHHHHTT---CSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             hHHHHhCC---CccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            68999999   88999999999998876521      234568999999987622   2567899999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhcCCChhhhhccccCCCCCCccccccCCCCCccccccccccccCCCCCc-cccccCCCCCCc
Q 043744           72 KHEVPPKLINDTMDVFKEFFDMPAEDKVSFYSENPSKTCKLYTSSLSYDREEIHLWRDNLRHPCHPL-EECMKLWPEKPT  150 (332)
Q Consensus        72 nhGi~~~l~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~y~~~~~~~~~~~~d~~e~~~~~~~p~-~~~~~~wP~~~~  150 (332)
                      ||||+.++++++++++++||+||.|+|+++......+..+||+...........+|.+.+.....+. ...+|.||+..+
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            9999999999999999999999999999997654334455555433333344455555433222222 234789999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhhc----CCcceeEeeecCCCCCCCCCccccCCcCCCCeEEEee
Q 043744          151 RYREVVGAYSNEAKKLGSIILELIAEGLGLESGYFRNQL----SESLLLSINHYPPCPNPSLTLGLVKHRDPNLITILLQ  226 (332)
Q Consensus       151 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~----~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  226 (332)
                      .|++.+++|+++|.+++.+|+++++++||+++++|.+.+    ...+.||++|||+++.+...+|+++|||+|+||||+|
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  242 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  242 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEec
Confidence            999999999999999999999999999999999998776    2456899999999999888999999999999999999


Q ss_pred             CCcCCeeEeeCCeEEEccCCCCeEEEEcchHHHHhcCCcccCcCceeecCCCCCceEEEeeeCCCCCcee-ecCccccCC
Q 043744          227 GDVCGLQVLKDGEWIGVEPLPNAFVINIGYILQVISNNKLKSVEHRAVTNSKEARTSAALFINPANDCVI-EPTKTLTEA  305 (332)
Q Consensus       227 d~~~GLqV~~~g~W~~V~p~~g~~iVniGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i-~p~~~~~~~  305 (332)
                      +.++||||+++|+|++|+|.+|++|||+||+|++||||+||||+|||+.+++++||||+||++|+.|++| +|+++|+++
T Consensus       243 ~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~  322 (349)
T d1gp6a_         243 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV  322 (349)
T ss_dssp             CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred             cCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCC
Confidence            9999999999999999999999999999999999999999999999999988999999999999999865 899999999


Q ss_pred             CCCCCCCCcCHHHHHHHHhcCC
Q 043744          306 SNPPIYRAFQYQEFLMDYISNP  327 (332)
Q Consensus       306 ~~~~~y~~~t~~e~~~~~~~~~  327 (332)
                      ++|++|+++||+||++.|+..+
T Consensus       323 ~~p~~y~~~t~~e~~~~rl~~~  344 (349)
T d1gp6a_         323 ESPAKFPPRTFAQHIEHKLFGK  344 (349)
T ss_dssp             SSCCSSCCEEHHHHHHHHHHHH
T ss_pred             CCCCCCCCccHHHHHHHHHhcc
Confidence            9999999999999999998543
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure