Citrus Sinensis ID: 043777

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-
Protein Sequence
MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI
Secondary Structure (PSIPRED)
cccccEEEEEccccHHHHHHHHHHHHccccEEEEEccccccccHHHHHHccccEEEEEcccccHHHHHHHHHHcccccccccccccccEEcccHHHHHHcccccccccccEEEEcccEEEEEcccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccEEEEEcccccccccccccccccccHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHccEEEccccccccHHHcccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccEEEEEEcHccHHEEEEEEccccccccHHHHHHHHHHHHcccccEEEccHHHHHHHHHcccEEccccEEEEEccccccEEcEccccccEccHHHHHHHcc
Coil and Loop (DISEMBL)
MAGKSNVLVIGAIGRIgyhftrrsieyghpkfaLIRDSASNFNFSLLRVFHSGvfdywglleDEKSLLEAVKQVdvrfipseygagvfvkdtdVAAFTinalddprtLNKLLHLREIShtfnmessgeldgtklyphlkyttisdyldtsvprgniysfnDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVlgdqtnfeiepsfgveatelypdvnytTVDEYLNQFI
Flexible Loop (DISEMBL)
MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSeygagvfvkdTDVAAFTINALDDPRTLNKLLHLREISHtfnmessgeldgTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEkarvlgdqtnfeiepsfgveatelypdvnyTTVDEYLNQFI
Low Complexity Region (SEG)
MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI
Disordered region (IsUnstruct)
*****NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLN***
Disordered Region (DISOPRED)
***KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA*********VFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI
Disordered Region (DISEMBL)
MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI
Disordered Region (DISPRO)
***KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	231	2.2.26 [Sep-21-2011]
E1U332	308	Isoflavone reductase-like	N/A	no	0.987	0.740	0.347	2e-32
P52578	308	Isoflavone reductase homo	N/A	no	0.978	0.733	0.348	1e-30
P52579	310	Isoflavone reductase homo	N/A	no	0.978	0.729	0.325	3e-30
P52580	309	Isoflavone reductase homo	N/A	no	0.978	0.731	0.319	3e-27
P52577	310	Isoflavone reductase homo	no	no	0.965	0.719	0.313	5e-26
P52576	318	Isoflavone reductase OS=P	N/A	no	0.982	0.713	0.282	3e-23
P52575	318	Isoflavone reductase OS=M	N/A	no	0.978	0.710	0.269	8e-22
Q00016	318	Isoflavone reductase OS=C	N/A	no	0.982	0.713	0.273	8e-21
Q15GI3	323	Isoeugenol synthase 1 OS=	N/A	no	0.978	0.699	0.265	8e-17
P52581	312	Isoflavone reductase homo	N/A	no	0.484	0.358	0.325	2e-12

>sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 149/311 (47%), Gaps = 83/311 (26%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS--ASNFNFSLLRVF-HSGVFDY 57
           MA K+ +L+IG  G IG      S +  HP FAL R+S  +      +++ F +SGV   
Sbjct: 1   MADKTKILIIGGTGYIGKFIVEASAKSEHPTFALARESTISDPVKGKIIQGFKNSGVTIL 60

Query: 58  WGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGV--- 87
            G L D +SL++A+KQVDV                           RF PS++G  V   
Sbjct: 61  TGDLYDHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIKEAGNVKRFFPSDFGTDVDRC 120

Query: 88  ----------------------------FVKDTDVAAFTINALDDPRTL----NKLLHLR 115
                                       FV     A +++  L  P       +K++ L 
Sbjct: 121 HAVEPAKSSFEIKSQIRRAIEAEGIPYTFVSANYFAGYSLPTLVQPEVTAPPRDKVIILG 180

Query: 116 E--ISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKA 173
           +      FN E+       K     +  T++  L    P+ NIYSFN+LV+LWE+KIGK 
Sbjct: 181 DGNAKAVFNEENDIGTYTIKAVDDAR--TLNKILYIKPPK-NIYSFNELVALWEKKIGKT 237

Query: 174 LDRVYVAEDQLLKNIQE-------------KARVLGDQTNFEIEPSFGVEATELYPDVNY 220
           L+++YV E+Q+LK IQE              A V GD TNF+IEPSFGVEA+ELYPDV Y
Sbjct: 238 LEKIYVPEEQVLKQIQESPFPINIVMAINHSAFVKGDLTNFKIEPSFGVEASELYPDVKY 297

Query: 221 TTVDEYLNQFI 231
           TTV+EYL+QF+
Sbjct: 298 TTVEEYLDQFV 308

Olea europaea (taxid: 4146)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 142/313 (45%), Gaps = 87/313 (27%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS--ASNFNFSLLRVFHS-GVFDY 57
           MAGKS +L IG  G IG      S + GH  F L+R+S  ++     L+  F S GV   
Sbjct: 1   MAGKSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFV 60

Query: 58  WGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAG---V 87
            G L D +SL++A+KQVDV                           RF PSE+G     V
Sbjct: 61  HGDLYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRFFPSEFGNDVDRV 120

Query: 88  FVKDTDVAAFTINALDDPRTLNKLLHLREISHTF------------NMESSGEL----DG 131
              +   AAF   A      + +++    I  T+            N+   G      D 
Sbjct: 121 HAVEPAKAAFNTKA-----QIRRVVEAEGIPFTYVATFFFAGYSLPNLAQPGAAGPPNDK 175

Query: 132 TKLYPHL-------KYTTISDYLDTSV-------------PRGNIYSFNDLVSLWEEKIG 171
             +  H        K   I  Y   +V             P  NI + N+LVSLWE+K G
Sbjct: 176 VVILGHGNTKAVFNKEEDIGTYTINAVDDPKTLNKILYIKPPHNIITLNELVSLWEKKTG 235

Query: 172 KALDRVYVAEDQLLKNIQEK-------------ARVLGDQTNFEIEPSFGVEATELYPDV 218
           K L+R+YV E+Q+LKNIQE              A V GD TNFEIEPSFGVEA+E+YPDV
Sbjct: 236 KNLERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDV 295

Query: 219 NYTTVDEYLNQFI 231
            YT +DE LNQ++
Sbjct: 296 KYTPIDEILNQYV 308

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1

 Score =  131 bits (330), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 147/307 (47%), Gaps = 81/307 (26%)

Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA--SNFNFSLLRVFHS-GVFDYWGL 60
           KS +L+IG  G IG +    S + GHP FALIR+S   +     L+  F S GV   +G 
Sbjct: 6   KSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGD 65

Query: 61  LEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGVFVKDTD 93
           + +++SLL+A+KQVDV                           RF+PSE+G  V      
Sbjct: 66  ISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFLPSEFGFDVDHARAI 125

Query: 94  VAAFTINALDDPRTLNKLLHLREISHT---------FNMESSGEL--------------D 130
             A ++ AL     + +++    I +T         F + + G+L              D
Sbjct: 126 EPAASLFALK--VRIRRMIEAEGIPYTYVICNWFADFFLPNLGQLEAKTPPRDKVVIFGD 183

Query: 131 GTKLYPHLKYTTISDYLDTSV-------------PRGNIYSFNDLVSLWEEKIGKALDRV 177
           G     ++K   I+ Y   +V             P  NI SFN++VSLWE+KIGK L+++
Sbjct: 184 GNPKAIYVKEEDIATYTIEAVDDPRTLNKTLHMRPPANILSFNEIVSLWEDKIGKTLEKL 243

Query: 178 YVAEDQLLKNIQEKARVL-------------GDQTNFEIEPSFGVEATELYPDVNYTTVD 224
           Y++E+ +L+ +QE    L             GD  NFE++P  GVEATELYP V YTTVD
Sbjct: 244 YLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVD 303

Query: 225 EYLNQFI 231
           E+ N+F+
Sbjct: 304 EFYNKFV 310

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1

 Score =  121 bits (304), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 135/307 (43%), Gaps = 81/307 (26%)

Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN--FNFSLLRVFH-SGVFDYWGL 60
           KS +LV+G  G +G H    S   GHP  AL+RD+A +     +LL+ F  +GV    G 
Sbjct: 5   KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 64

Query: 61  LEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGVFVKDTD 93
           L D+ SL+ AVK  DV                           RF PSE+  G+ V  T 
Sbjct: 65  LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEF--GLDVDRTG 122

Query: 94  VAAFTINALDDPRTLNKLLHLREISHT---------FNMESSGEL--------------D 130
           +     + L     + +      I +T         F +   G++              D
Sbjct: 123 IVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGD 182

Query: 131 GTKLYPHLKYTTISDYLDTSV-------------PRGNIYSFNDLVSLWEEKIGKALDRV 177
           G      ++   I+ Y   +              P  N  S N+L+SLWE+K GK   R 
Sbjct: 183 GDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRRE 242

Query: 178 YVAEDQLLKNIQEK-------------ARVLGDQTNFEIEPSFGVEATELYPDVNYTTVD 224
           YV E+ +LK IQE              A V G+QT FEI+P+ GV+A+ELYPDV YTTVD
Sbjct: 243 YVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVD 302

Query: 225 EYLNQFI 231
           EYLN+F+
Sbjct: 303 EYLNRFL 309

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score =  117 bits (294), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 136/309 (44%), Gaps = 86/309 (27%)

Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS--ASNFNFSLLRVFHS-GVFDYWGL 60
           KS +LVIG  G IG      S + GH  FAL+R++  +       ++ F   GV    G 
Sbjct: 5   KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGD 64

Query: 61  LEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGVFVKDTD 93
           L D +SL++A+KQVDV                           RF+PSE+  GV V  T 
Sbjct: 65  LNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFLPSEF--GVDVDRTS 122

Query: 94  VAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKL------------YPHLKYT 141
                 +A      + + +    I +T+ +  +G   G  L             P  K T
Sbjct: 123 AVEPAKSAFAGKIQIRRTIEAEGIPYTYAV--TGCFGGYYLPTLVQFEPGLTSPPRDKVT 180

Query: 142 TISDYLDTSV----------------------------PRGNIYSFNDLVSLWEEKIGKA 173
            + D    +V                            P  N  S N++V+LWE+KIGK+
Sbjct: 181 ILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNKILYIKPSNNTLSMNEIVTLWEKKIGKS 240

Query: 174 LDRVYVAEDQLLKNIQEK------------ARVLGDQTNFEIEPSFGVEATELYPDVNYT 221
           L++ ++ E+QLLK+IQE             A  +   TN  IEPSFGVEA+ELYPDV YT
Sbjct: 241 LEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGDTNISIEPSFGVEASELYPDVKYT 300

Query: 222 TVDEYLNQF 230
           +VDEYL+ F
Sbjct: 301 SVDEYLSYF 309

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52576|IFR_PEA Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1

 Score =  108 bits (270), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 142/322 (44%), Gaps = 95/322 (29%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNF-------------SLL 47
           MA ++ +L++GA G IG H    SI+ G+P +AL+R ++ N N               LL
Sbjct: 1   MATENKILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELL 60

Query: 48  RVFH-SGVFDYWGLLEDEKSLLEAVKQVDV---------------------------RFI 79
           + +  SGV    G + D ++L+ A+KQVD                            RF 
Sbjct: 61  KNYQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRFF 120

Query: 80  PSEYGAGVFVKDT----------------------------DVAAFT---------INAL 102
           PSE+G  V   D                                AFT         I+A 
Sbjct: 121 PSEFGLDVDRHDAVEPVRQVFEEKASIRRVVESEGVPYTYLCCHAFTGYFLRNLAQIDAT 180

Query: 103 DDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDL 162
           D PR    +L    +   +  E+  ++    +       T++  +   +P  N  + N++
Sbjct: 181 DPPRDKVVILGDGNVRGAYVTEA--DVGTYTIRAANDPNTLNKAVHIRLP-NNYLTANEV 237

Query: 163 VSLWEEKIGKALDRVYVAEDQLLKNIQEKA-------------RVLGDQTNFEIEPSFGV 209
           ++LWE+KIGK L++ YV+E+Q+LK+IQ  +             ++ GD   +EI+P+  V
Sbjct: 238 IALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKGDAV-YEIDPAKDV 296

Query: 210 EATELYPDVNYTTVDEYLNQFI 231
           EA + YPDV YTT DEYLNQF+
Sbjct: 297 EAYDAYPDVKYTTADEYLNQFV 318

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product (sophrol) is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (+)-pisatin, the major phytoalexin in pea.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|P52575|IFR_MEDSA Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1

 Score =  103 bits (258), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 145/323 (44%), Gaps = 97/323 (30%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNF-------------SLL 47
           MA ++ +L++G  G IG H    SI+ G+P +AL+R +  N N               L+
Sbjct: 1   MATENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTPGNVNKPKLITAANPETKEELI 60

Query: 48  RVFHS-GVFDYWGLLEDEKSLLEAVKQVDV---------------------------RFI 79
             + S GV    G + D ++L++A+KQVD+                           +F 
Sbjct: 61  DNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 120

Query: 80  PSEYGAGVFVKDTDVAAFTINAL-DDPRTLNKLLHLREISHTFN---------MESSGEL 129
           PSE+G  V   D   A   +  + ++  ++ +++    + +T+          + +  +L
Sbjct: 121 PSEFGLDV---DRHEAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQL 177

Query: 130 DGTKLYPHLKYTTISD-------YLDTSVPRGNIYSFND--------------------- 161
           D T   P  K   + D         +  V    I + ND                     
Sbjct: 178 DTTDP-PRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPENYLTQNE 236

Query: 162 LVSLWEEKIGKALDRVYVAEDQLLKNIQEKA-------------RVLGDQTNFEIEPSFG 208
           +++LWE+KIGK L++ YV+E+Q+LK+IQE +             ++ GD   +EI+P+  
Sbjct: 237 VIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAV-YEIDPAKD 295

Query: 209 VEATELYPDVNYTTVDEYLNQFI 231
           +EA+E YPDV YTT DEYLNQF+
Sbjct: 296 IEASEAYPDVTYTTADEYLNQFV 318

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (-)-medicarpin, the major phytoalexin in Alfalfa.

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|Q00016|IFR_CICAR Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1

 Score =  100 bits (249), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 95/322 (29%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFS-------------LL 47
           MA ++ +LV+G  G IG H    SI+ G+P +ALIR +  + N               LL
Sbjct: 1   MASQNRILVLGPTGAIGRHVVWASIKAGNPTYALIRKTPGDINKPSLVAAANPESKEELL 60

Query: 48  RVFH-SGVFDYWGLLEDEKSLLEAVKQVDV---------------------------RFI 79
           + F  +GV    G + D ++L++A+KQVD                            RF 
Sbjct: 61  QSFKAAGVILLEGDMNDHEALVKAIKQVDTVICTFGRLLILDQVKIIKAIKEAGNVKRFF 120

Query: 80  PSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFN---------MESSGELD 130
           PSE+  G+ V   D         D+  ++ +++    + +T+          + +  + D
Sbjct: 121 PSEF--GLDVDRHDAVDPVRPVFDEKASIRRVVEAEGVPYTYLCCHAFTGYFLRNLAQFD 178

Query: 131 GTKLYPHLK------------YTTISDYLDTSV-----PRG-----------NIYSFNDL 162
            T+  P  K            Y T +D    ++     PR            N  + N++
Sbjct: 179 ATEP-PRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNKAVHIRLPHNYLTSNEV 237

Query: 163 VSLWEEKIGKALDRVYVAEDQLLKNIQ-------------EKARVLGDQTNFEIEPSFGV 209
           VSLWE+KIGK L++ Y++E+++LK+I                 ++ GD   +EI+P+   
Sbjct: 238 VSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKGDAV-YEIDPAKDA 296

Query: 210 EATELYPDVNYTTVDEYLNQFI 231
           EA +LYPDV YTT DEYL+QF+
Sbjct: 297 EAYDLYPDVKYTTADEYLDQFV 318

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins.

Cicer arietinum (taxid: 3827)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 126/301 (41%), Gaps = 75/301 (24%)

Query: 3   GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI---RDSASNFNFSLLRVFHS-GVFDYW 58
           GK  +L++GA G +G +  + SI  GHP +A +   + ++ +    LL+ F S GV  ++
Sbjct: 4   GKGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFY 63

Query: 59  GLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGV---- 87
           G L +   L+   K+VD+                           RF+PSE+G  V    
Sbjct: 64  GELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFVPSEFGNEVDRVR 123

Query: 88  --------------FVKDTDVAA--FTINALDDPRT--LNKLLHLREISHTFNMESSGEL 129
                           + T+ A   FT  + +      ++ LLH R+ S    +  SG+ 
Sbjct: 124 ALPRFQAVLDNKKKIRRATEAAGIPFTFVSANSLTAYFVDYLLHPRQKSEQVTIYGSGDA 183

Query: 130 DGTKLYPH-LKYTTISDYLDTSV--------PRGNIYSFNDLVSLWEEKIGKALDRVYVA 180
                Y   +   TI    D           P  NI S  DLVS WE+  G  L   +++
Sbjct: 184 KAVLNYEEDVAAYTIKAADDPRAANRVLIIKPPKNIVSQLDLVSSWEKTTGSTLKMTHIS 243

Query: 181 EDQLLK-------------NIQEKARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYL 227
           E +++K             +I     + G Q +FE+     +EA+ELYP+ NYT+VDEYL
Sbjct: 244 EQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLEASELYPNYNYTSVDEYL 303

Query: 228 N 228
            
Sbjct: 304 K 304

Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 9

>sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1

 Score = 72.8 bits (177), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 54/166 (32%)

Query: 83  YGAG----VFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHL 138
           YG G    V++ + DVA +TI  +DDPRTLNK ++LR                       
Sbjct: 184 YGDGNVKPVYMDEDDVATYTIKTIDDPRTLNKTVYLR----------------------- 220

Query: 139 KYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLL---KNIQEKARV- 194
                        P  NI +  +L+  WEE IGK L++  ++E   L   K +   ++V 
Sbjct: 221 -------------PPENILTHKELIEKWEELIGKQLEKNSISEKDFLSTLKGLDFASQVG 267

Query: 195 ---------LGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
                     G  TNFEI  + G EA+ELYP+VNYT +D+YL  ++
Sbjct: 268 VGHFYHIFYEGCLTNFEIGEN-GEEASELYPEVNYTRMDQYLKVYV 312

Lupinus albus (taxid: 3870)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	231
76559894	306	TPA: isoflavone reductase-like protein 5	0.961	0.725	0.361	3e-37
225428436	306	PREDICTED: isoflavone reductase homolog	0.961	0.725	0.358	6e-37
169639226	305	phenylcoumaran benzylic ether reductase	0.987	0.747	0.347	1e-35
169639228	305	phenylcoumaran benzylic ether reductase	0.987	0.747	0.347	3e-35
449438299	308	PREDICTED: isoflavone reductase homolog	0.978	0.733	0.348	6e-34
225428438	308	PREDICTED: isoflavone reductase homolog	0.978	0.733	0.354	2e-33
76559896	308	TPA: isoflavone reductase-like protein 6	0.978	0.733	0.364	2e-33
149349524	309	eugenol synthase 2 [Clarkia breweri]	0.978	0.731	0.343	2e-32
225428442	308	PREDICTED: isoflavone reductase homolog	0.978	0.733	0.357	2e-32
225458243	308	PREDICTED: isoflavone reductase homolog	0.961	0.720	0.350	2e-32

>gi|76559894|tpe|CAI56334.1| TPA: isoflavone reductase-like protein 5 [Vitis vinifera]

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/315 (36%), Positives = 150/315 (47%), Gaps = 93/315 (29%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWG 59
           M+ KS +L+IG  G IG      S + GHP FAL+R+S  +  F ++  F  SGV   +G
Sbjct: 1   MSEKSKILIIGGTGYIGKFIVAASAKSGHPTFALVRESTVSEKFEIIESFKSSGVTLVYG 60

Query: 60  LLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGVFVKDT 92
            L D +SL++A+KQVDV                           RF PSE+G      D 
Sbjct: 61  DLYDHESLVKAIKQVDVVISTVGHAQLPDQVKIIAAIKEAGNVKRFFPSEFG-----NDV 115

Query: 93  DVAAFTINALDDPRT-------LNKLLHLREISHTFNMES--------SGELDGTKLYPH 137
           D     ++A++  +T       + + +    I +T+   +        S    G    P 
Sbjct: 116 D----RVHAVEPAKTAFATKAQIRRTIEAEGIPYTYVSSNFFAGYFLPSLSQPGATTPPR 171

Query: 138 LKYTTISDYLDTSV----------------------------PRGNIYSFNDLVSLWEEK 169
            K   + D    +V                            P  N YSFNDLVSLWE+K
Sbjct: 172 DKVIILGDGNPKAVFNKEDDIGTYTIKAVDDPRTLNKILYIRPPQNTYSFNDLVSLWEKK 231

Query: 170 IGKALDRVYVAEDQLLKNIQEKARVL-------------GDQTNFEIEPSFGVEATELYP 216
           IGK L+++YV E+Q+LKNIQE +  L             GD TNFEIEPSFGVEATELYP
Sbjct: 232 IGKTLEKIYVPEEQVLKNIQEASVPLNVILSISHSVFIKGDHTNFEIEPSFGVEATELYP 291

Query: 217 DVNYTTVDEYLNQFI 231
           DV YTTVDEYLNQF+
Sbjct: 292 DVKYTTVDEYLNQFV 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428436|ref|XP_002283953.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] gi|297744403|emb|CBI37665.3| unnamed protein product [Vitis vinifera]

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 150/315 (47%), Gaps = 93/315 (29%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWG 59
           M+ KS +L+IG  G IG      S + GHP FAL+R+S  +  F ++  F  SGV   +G
Sbjct: 1   MSEKSKILIIGGTGYIGKFIVAASAKSGHPTFALVRESTVSEKFEIIESFKSSGVTLVYG 60

Query: 60  LLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGVFVKDT 92
            L D +SL++A+KQVDV                           RF PSE+G      D 
Sbjct: 61  DLYDHESLVKAIKQVDVVISTVGHAQLPDQVKIIAAIKEAGNVKRFFPSEFG-----NDV 115

Query: 93  DVAAFTINALDDPRT-------LNKLLHLREISHTFNMES--------SGELDGTKLYPH 137
           D     ++A++  +T       + + +    I +T+   +        S    G    P 
Sbjct: 116 D----RVHAVEPAKTAFATKAQIRRTIEAEGIPYTYVSSNFFAGYFLPSLSQPGATTPPR 171

Query: 138 LKYTTISDYLDTSV----------------------------PRGNIYSFNDLVSLWEEK 169
            K   + D    +V                            P  N YSFNDLVSLWE+K
Sbjct: 172 DKVIILGDGNPKAVFNKEDDIGTYTIKAVNDPRTLNKILYIRPPQNTYSFNDLVSLWEKK 231

Query: 170 IGKALDRVYVAEDQLLKNIQEKARVL-------------GDQTNFEIEPSFGVEATELYP 216
           IGK L+++YV E+Q+LKNIQE +  L             GD TNFEI+PSFGVEATELYP
Sbjct: 232 IGKTLEKIYVPEEQVLKNIQEASVPLNVILSISHSVFIKGDHTNFEIQPSFGVEATELYP 291

Query: 217 DVNYTTVDEYLNQFI 231
           DV YTTVDEYLNQF+
Sbjct: 292 DVKYTTVDEYLNQFV 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|169639226|gb|ACA60729.1| phenylcoumaran benzylic ether reductase 1 [Linum corymbulosum]

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/308 (34%), Positives = 151/308 (49%), Gaps = 80/308 (25%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS-GVFDYWG 59
           MA KS +LVIG  G IG H    S + G+P FAL+R+S  +   +++  F S GV    G
Sbjct: 1   MAEKSKILVIGGTGYIGKHIVEASAKAGNPTFALVRESTLSSKSAVIDGFKSLGVTIVVG 60

Query: 60  LLEDEKSLLEAVKQVDV--------------------------RFIPSEYGAGVFVKDTD 93
            ++D + L++ +K+VD+                          RF+PSE+G  V   D  
Sbjct: 61  DVDDHEKLVKTIKEVDIVISALGQQIPDQVKIIAAIKEAGNVKRFLPSEFGNDV---DRT 117

Query: 94  VAAFTINAL-DDPRTLNKLLHLREISHTF------------NMESSGEL----------- 129
            A   +N++  +   + + +    I HTF            N+   G             
Sbjct: 118 RAVEPVNSIFQEKVKIRRAVEAAGIPHTFVSSNCFAGYFLPNLNQPGATSPPRENVIILG 177

Query: 130 DGTKLYPHLKYTTISDYLDTSV-------------PRGNIYSFNDLVSLWEEKIGKALDR 176
           DGT    + K   I  +   +              P+ N YSFNDLV+LWE+KIGK L +
Sbjct: 178 DGTAKAVYNKEQDIGTFTIKAAQDPRTLNKIVYIRPQSNTYSFNDLVALWEKKIGKTLQK 237

Query: 177 VYVAEDQLLKNIQE-------------KARVLGDQTNFEIEPSFGVEATELYPDVNYTTV 223
           +Y+ E+Q+LKNIQE                VLGDQT FEIEPSFG+EA+ELYP+V YTTV
Sbjct: 238 IYIPEEQILKNIQEAEIPMNIIYALGHAVFVLGDQTYFEIEPSFGLEASELYPEVKYTTV 297

Query: 224 DEYLNQFI 231
           +EYL+QF+
Sbjct: 298 EEYLDQFV 305

Source: Linum corymbulosum

Species: Linum corymbulosum

Genus: Linum

Family: Linaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|169639228|gb|ACA60730.1| phenylcoumaran benzylic ether reductase 2 [Linum corymbulosum]

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/308 (34%), Positives = 149/308 (48%), Gaps = 80/308 (25%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS-GVFDYWG 59
           MA KS +LVIG  G IG H    S + G P FAL+R+S  +   +++  F S GV    G
Sbjct: 1   MAEKSKILVIGGTGYIGKHIVEASAKAGSPTFALVRESTLSSKSAVIDGFKSLGVTIVVG 60

Query: 60  LLEDEKSLLEAVKQVDV--------------------------RFIPSEYGAGVFVKDTD 93
            ++D + L++ +K+VD+                          RF+PSE+G  V   D  
Sbjct: 61  DVDDHEKLVKTIKEVDIVISALGQQIPDQVKIIAAIKEAGNVKRFLPSEFGNDV---DRT 117

Query: 94  VAAFTINAL-DDPRTLNKLLHLREISHTF------------NMESSGEL----------- 129
            A   +N++  +   + + +    I HTF            N+   G             
Sbjct: 118 RAVEPVNSIFQEKVKIRRAVEAAGIPHTFVSSNCFAGYFLPNLNQPGATSPPRENVIILG 177

Query: 130 DGTKLYPHLKYTTISDYLDTSV-------------PRGNIYSFNDLVSLWEEKIGKALDR 176
           DGT    + K   I  +   +              P+ N YSFNDLV+LWE+KIGK L +
Sbjct: 178 DGTAKAVYNKEQDIGTFTIKAAQDPRTLNKIVYIRPQSNTYSFNDLVALWEKKIGKTLQK 237

Query: 177 VYVAEDQLLKNIQE-------------KARVLGDQTNFEIEPSFGVEATELYPDVNYTTV 223
           +Y+ E+Q+LKNIQE                VLGDQT  EIEPSFG+EA+ELYPDV YTTV
Sbjct: 238 IYIPEEQILKNIQEAEISMNIIYALGHAVFVLGDQTYLEIEPSFGLEASELYPDVKYTTV 297

Query: 224 DEYLNQFI 231
           +EYL+QF+
Sbjct: 298 EEYLDQFV 305

Source: Linum corymbulosum

Species: Linum corymbulosum

Genus: Linum

Family: Linaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438299|ref|XP_004136926.1| PREDICTED: isoflavone reductase homolog [Cucumis sativus] gi|449478781|ref|XP_004155417.1| PREDICTED: isoflavone reductase homolog [Cucumis sativus]

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 148/313 (47%), Gaps = 87/313 (27%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS--ASNFNFSLLRVFHS-GVFDY 57
           MA KS +L++G  G IG      S + G+P +AL+RDS  +      ++  F + GV   
Sbjct: 1   MASKSKILIVGGTGYIGKFIVEASAKAGNPTYALVRDSTLSDPAKSQIINNFKNLGVKLV 60

Query: 58  WGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGV--- 87
            G L +  SL++A+K+VDV                           RF+PSE+G  V   
Sbjct: 61  SGDLYNHDSLVKAIKEVDVVISTVGAGQLADQEKLIAAIKEAGNVKRFLPSEFGNDVDRG 120

Query: 88  FVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMES--------SGELDGTKLYPHLK 139
              +   +AFT+        + + +   +I +T+   +        S    G    P  K
Sbjct: 121 HAVEPAKSAFTVKV-----QIRRAVEAAKIPYTYVSSNFFASYFLPSLSQPGATTPPRDK 175

Query: 140 YTTISDYLDTSV----------------------------PRGNIYSFNDLVSLWEEKIG 171
              + D    S+                            P GN YSFNDLVSLWE+KIG
Sbjct: 176 VVILGDGNPKSIFNKEDDIGTYTIKAVDDPRTLNKILYIRPSGNTYSFNDLVSLWEKKIG 235

Query: 172 KALDRVYVAEDQLLKNIQE-------------KARVLGDQTNFEIEPSFGVEATELYPDV 218
           K L+R+YV E+Q+LKNIQE              A V GD TNF+IEPSFGVEAT+LYPDV
Sbjct: 236 KNLERIYVPEEQVLKNIQEAPVPLNIIISISHSAFVKGDHTNFDIEPSFGVEATQLYPDV 295

Query: 219 NYTTVDEYLNQFI 231
            YTTVDE+LNQF+
Sbjct: 296 KYTTVDEFLNQFV 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428438|ref|XP_002284006.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] gi|297744402|emb|CBI37664.3| unnamed protein product [Vitis vinifera]

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 149/313 (47%), Gaps = 87/313 (27%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA-SNFNFS-LLRVFH-SGVFDY 57
           M+ KS +L+IG  G IG      S + GHP FAL+R+SA SN + S ++ +F  SGV   
Sbjct: 1   MSEKSKILIIGGTGYIGKFIVAASAKSGHPTFALVRESAVSNPSKSEIIEIFKSSGVTLV 60

Query: 58  WGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAG---V 87
           +G L D +SL++A+  VDV                           RF PSE+G     V
Sbjct: 61  YGDLYDHESLVKAINLVDVVISTVGRAQLSDQVKIIAAIKEAGNVKRFFPSEFGNDVDRV 120

Query: 88  FVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMES--------SGELDGTKLYPHLK 139
              +    AF I A      + + +    I +T+   +        +    G    P  K
Sbjct: 121 HAVEPAKTAFEIKA-----QIRRTIEAEGIPYTYVSSNTFAGFFLPTFSQPGATAPPRDK 175

Query: 140 YTTISDYLDTSV----------------------------PRGNIYSFNDLVSLWEEKIG 171
              + D    +V                            P  N YSFN++VSLWE+KIG
Sbjct: 176 VIILGDGNPKAVFNKEDDIGTYTIKAADDPRTLNKILYIRPPQNTYSFNEIVSLWEKKIG 235

Query: 172 KALDRVYVAEDQLLKNIQEKARVL-------------GDQTNFEIEPSFGVEATELYPDV 218
           K L+++YV E+Q+LKNIQE +  L             GD TNFEI+PSFGVEA+ELYPDV
Sbjct: 236 KTLEKIYVPEEQVLKNIQEASVPLNVMLAFCHSVFVKGDHTNFEIKPSFGVEASELYPDV 295

Query: 219 NYTTVDEYLNQFI 231
            YTTVDEYLNQF+
Sbjct: 296 KYTTVDEYLNQFV 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76559896|tpe|CAI56335.1| TPA: isoflavone reductase-like protein 6 [Vitis vinifera]

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/313 (36%), Positives = 148/313 (47%), Gaps = 87/313 (27%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA-SNFNFS-LLRVFH-SGVFDY 57
           M+ KS +L+IG  G IG      S   GHP FALIR+S  SN + S ++  F  SGV   
Sbjct: 1   MSDKSKILIIGGTGYIGKFIVAASARLGHPTFALIRESTVSNPSKSGIIESFKSSGVSLV 60

Query: 58  WGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAG---V 87
           +G L D +SL++A+KQVDV                           RF PSE+G     V
Sbjct: 61  YGDLYDHESLVKAIKQVDVVISTVGRAQLSDQVKIIAAIKEAGNVKRFFPSEFGNDVDRV 120

Query: 88  FVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMES--------SGELDGTKLYPHLK 139
                   AF I A      + + +    I +T+   +        +    G    P  K
Sbjct: 121 HAVGPAKTAFEIKA-----QIRRTIEAEGIPYTYVSSNFFAGFFLPTLSQPGATAPPRDK 175

Query: 140 YTTISDYLDTSV-----------------PRG-----------NIYSFNDLVSLWEEKIG 171
              + D    +V                 PR            N YSFN++VSLWE+KIG
Sbjct: 176 VIILGDGNPKAVFNKEDDIGTYTIKAADDPRALNKILYIRPPQNTYSFNEIVSLWEKKIG 235

Query: 172 KALDRVYVAEDQLLKNIQEKARVL-------------GDQTNFEIEPSFGVEATELYPDV 218
           K L+++YV E+Q+LKNIQE +  L             GD TNFEIEPSFGVEA+ELYPDV
Sbjct: 236 KTLEKIYVPEEQVLKNIQEASFPLNVILSISHSVFIKGDHTNFEIEPSFGVEASELYPDV 295

Query: 219 NYTTVDEYLNQFI 231
            YTTVDEYL+QF+
Sbjct: 296 KYTTVDEYLDQFV 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|149349524|gb|ABR24114.1| eugenol synthase 2 [Clarkia breweri]

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 146/314 (46%), Gaps = 88/314 (28%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS--ASNFNFSLLRVFHS-GVFDY 57
           M  KS +L+IG  G IG      S++ GHP FAL+R++  +      L+  F + GV   
Sbjct: 1   MGSKSKILIIGGTGYIGKFIVEASVKEGHPTFALVRETTVSDPVKGKLVEKFQNLGVSLL 60

Query: 58  WGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGV--- 87
           +G L D  SL++A+KQVDV                           RF PSE+G  V   
Sbjct: 61  YGDLYDHDSLVKAIKQVDVVISTVGFMQIADQTKIIAAIKEAGNVKRFFPSEFGNDVDHV 120

Query: 88  -FVKDTDVAAFTINALDDPRTLNKLLHLREISHTF------------NMESSGEL----- 129
             V+     AF + A      + + +    I +T+             +   G       
Sbjct: 121 NAVEPAKSVAFAVKA-----NIRRAVEAEGIPYTYVASNCFNGYFLPTLVQPGATTPPRD 175

Query: 130 ------DGTKLYPHLKYTTISDYLDTSV-------------PRGNIYSFNDLVSLWEEKI 170
                 DG       K   I  Y   +V             P  NIYSFN+LV+LWE+KI
Sbjct: 176 KVIIPGDGNPKAIFNKEEDIGTYTIKAVDDPRTLNKILYLRPSNNIYSFNELVALWEKKI 235

Query: 171 GKALDRVYVAEDQLLKNIQE-------------KARVLGDQTNFEIEPSFGVEATELYPD 217
           GK L+++YV E+Q+LK+IQE                V GD TNFEIEPSFGVEA+ELYP+
Sbjct: 236 GKTLEKIYVPEEQILKDIQEAPIPINIFLGINHSVFVKGDHTNFEIEPSFGVEASELYPE 295

Query: 218 VNYTTVDEYLNQFI 231
           V YTTV+EYL+QF+
Sbjct: 296 VKYTTVEEYLDQFV 309

Source: Clarkia breweri

Species: Clarkia breweri

Genus: Clarkia

Family: Onagraceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428442|ref|XP_002283978.1| PREDICTED: isoflavone reductase homolog [Vitis vinifera] gi|297744400|emb|CBI37662.3| unnamed protein product [Vitis vinifera]

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/313 (35%), Positives = 148/313 (47%), Gaps = 87/313 (27%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA-SNFNFS-LLRVFH-SGVFDY 57
           M+ KS +L+IG  G IG      S   GHP FALIR+S  SN + S ++  F  SGV   
Sbjct: 1   MSDKSKILIIGGTGYIGKFIVAASARLGHPTFALIRESTVSNPSKSGIIESFKSSGVSLV 60

Query: 58  WGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAG---V 87
           +G L D +SL++A+KQVDV                           RF PSE+G     V
Sbjct: 61  YGDLYDHESLVKAIKQVDVVISTVGRAQLSDQVKIIAAIKEAGNVKRFFPSEFGNDVDRV 120

Query: 88  FVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMES--------SGELDGTKLYPHLK 139
                   AF I A      + + +    I +T+   +        +    G    P  K
Sbjct: 121 HAVGPAKTAFEIKA-----QIRRTIEAEGIPYTYVSSNFFAGFFLPTLSQPGATAPPRDK 175

Query: 140 YTTISDYLDTSV-----------------PRG-----------NIYSFNDLVSLWEEKIG 171
              + D    +V                 PR            N YSFN+++SLWE+KIG
Sbjct: 176 VIILGDGNPKAVFNKEDDIGTYTIKAADDPRALNKILYIRPPQNTYSFNEILSLWEKKIG 235

Query: 172 KALDRVYVAEDQLLKNIQEKARVL-------------GDQTNFEIEPSFGVEATELYPDV 218
           K L+++YV E+Q+LKNIQE +  L             GD TNFEI+PSFGVEA+ELYPDV
Sbjct: 236 KTLEKIYVPEEQVLKNIQEASFPLNVILSISHSVFIKGDHTNFEIKPSFGVEASELYPDV 295

Query: 219 NYTTVDEYLNQFI 231
            YTTVDEYL+QF+
Sbjct: 296 KYTTVDEYLDQFV 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458243|ref|XP_002282110.1| PREDICTED: isoflavone reductase homolog P3 [Vitis vinifera] gi|302142513|emb|CBI19716.3| unnamed protein product [Vitis vinifera]

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/317 (35%), Positives = 148/317 (46%), Gaps = 95/317 (29%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS--ASNFNFSLLRVF-HSGVFDY 57
           MA KS +L+IG  G IG    + S + GHP FAL+R+S  A      L++ F +SGV   
Sbjct: 1   MAEKSKILIIGGTGYIGKFVVQASAKSGHPTFALVRESTIADPVKGKLIQEFKNSGVTLL 60

Query: 58  WGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGVFVK 90
            G L D  SL++A+KQVDV                           RF+PSE+G      
Sbjct: 61  HGDLYDHDSLVKAIKQVDVVISTVGFMQLADQVKIIAAIKEAGNVKRFLPSEFG-----N 115

Query: 91  DTDVAAFTINALDDPRT-------LNKLLHLREISHTFNMESSGE--------LDGTKLY 135
           D D     +NA++  ++       + + +    I +TF + +             G    
Sbjct: 116 DVD----RVNAVEPAKSAFAAKVQMRRAIEAEGIPYTFVVANCFAGYFLPTLVQPGVSAP 171

Query: 136 PHLKYTTISD---------------YLDTSV-------------PRGNIYSFNDLVSLWE 167
           P  K   + D               Y   +V             P  +  SFN+LVSLWE
Sbjct: 172 PRDKVIILGDGNPKACFNREDDIGTYTIKAVDDPRTLNKILYIKPPNSTLSFNELVSLWE 231

Query: 168 EKIGKALDRVYVAEDQLLKNIQEKAR-------------VLGDQTNFEIEPSFGVEATEL 214
            KIGK L++VYV E+Q+LK+IQE                V GDQTNFEIEPSFGVEA+EL
Sbjct: 232 SKIGKTLEKVYVPEEQVLKDIQEAPMPINVFLSIQHSVFVNGDQTNFEIEPSFGVEASEL 291

Query: 215 YPDVNYTTVDEYLNQFI 231
           YPDV Y TVDEYL+ F+
Sbjct: 292 YPDVKYCTVDEYLSAFV 308

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	231
TAIR|locus:2136383	308	AT4G39230 [Arabidopsis thalian	0.346	0.259	0.612	1.9e-43
TAIR|locus:2016482	310	AT1G19540 [Arabidopsis thalian	0.346	0.258	0.537	1.3e-30
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.341	0.248	0.510	5.3e-30
TAIR|locus:2139494	306	AT4G34540 [Arabidopsis thalian	0.346	0.261	0.462	8.2e-30
TAIR|locus:2025167	322	AT1G75300 [Arabidopsis thalian	0.341	0.245	0.516	1.4e-29
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.341	0.254	0.516	3.7e-29
TAIR|locus:2119455	317	PRR2 "pinoresinol reductase 2"	0.346	0.252	0.351	1.8e-14
TAIR|locus:2031730	317	PRR1 "pinoresinol reductase 1"	0.393	0.287	0.318	5.5e-09

TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 1.9e-43, Sum P(3) = 1.9e-43
 Identities = 57/93 (61%), Positives = 65/93 (69%)

Query:   152 PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVL-------------GDQ 198
             P  N YSFNDLVSLWE KIGK L+R+YV E+QLLK I E +  L             G  
Sbjct:   216 PPMNTYSFNDLVSLWENKIGKTLERIYVPEEQLLKQIIESSPPLNVMLSLCHCVFVKGGH 275

Query:   199 TNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
             T+FEIEPSFGVEA+ELYPDV YTTVDE LNQ++
Sbjct:   276 TSFEIEPSFGVEASELYPDVKYTTVDEILNQYV 308

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0032442 "phenylcoumaran benzylic ether reductase activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
 Identities = 50/93 (53%), Positives = 63/93 (67%)

Query:   152 PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKAR-------------VLGDQ 198
             P   I S ND+V LWEEKIGK L++ YV+E++LLK IQE                V  D 
Sbjct:   218 PPNYIVSQNDMVGLWEEKIGKTLEKTYVSEEELLKTIQESKPPMDFLVGLIHTILVKSDF 277

Query:   199 TNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
             T+F I+PSFGVEA+ELYP+V YT+VDE+LN+FI
Sbjct:   278 TSFTIDPSFGVEASELYPEVKYTSVDEFLNRFI 310

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
 Identities = 47/92 (51%), Positives = 66/92 (71%)

Query:   152 PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKA---RVL----------GDQ 198
             P  N  S N++V+LWE+KIGK+++++Y++E+Q+ K+IQE      VL          GDQ
Sbjct:   219 PPNNTLSMNEIVTLWEKKIGKSVEKIYMSEEQIFKSIQESPVPFNVLLSINHAVFVKGDQ 278

Query:   199 TNFEIEPSFGVEATELYPDVNYTTVDEYLNQF 230
             TNF IEPSFG EA+ELYPD+ YT++DEYL+ F
Sbjct:   279 TNFTIEPSFGFEASELYPDIKYTSIDEYLSYF 310

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 8.2e-30, Sum P(2) = 8.2e-30
 Identities = 43/93 (46%), Positives = 53/93 (56%)

Query:   152 PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQE-------------KARVLGDQ 198
             P GNI S NDLV LWE KI K L++ +  E+QLLK I+E                + GD 
Sbjct:   214 PPGNICSMNDLVELWEGKIEKKLEKTFATENQLLKKIKETPYPDNMEMVFIYSVFIKGDH 273

Query:   199 TNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
             T F+IE   GV  TELYPDV Y TV E+L+  +
Sbjct:   274 TYFDIESCGGVNGTELYPDVKYMTVSEFLDTLL 306

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS

TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 46/89 (51%), Positives = 64/89 (71%)

Query:   152 PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVL----------GDQTNF 201
             P  NI S N++V+LWE+KIGK+L++ +++E+Q+LK+IQ    V           GDQT+F
Sbjct:   233 PPNNILSMNEMVTLWEKKIGKSLEKTHISEEQILKSIQVPIDVFKSINHAVFVKGDQTSF 292

Query:   202 EIEPSFGVEATELYPDVNYTTVDEYLNQF 230
              IEP FG EA+ LYPDV YT++DEYL+QF
Sbjct:   293 TIEPWFGEEASVLYPDVKYTSIDEYLSQF 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 47/91 (51%), Positives = 62/91 (68%)

Query:   152 PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEK------------ARVLGDQT 199
             P  N  S N++V+LWE+KIGK+L++ ++ E+QLLK+IQE             A  +   T
Sbjct:   219 PSNNTLSMNEIVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNGDT 278

Query:   200 NFEIEPSFGVEATELYPDVNYTTVDEYLNQF 230
             N  IEPSFGVEA+ELYPDV YT+VDEYL+ F
Sbjct:   279 NISIEPSFGVEASELYPDVKYTSVDEYLSYF 309

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
 Identities = 32/91 (35%), Positives = 48/91 (52%)

Query:   152 PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKA----RVLGD--QTNFE--- 202
             P  NI +  +LV +WE+   K L++ YV+ +  L +I++K       LG      +E   
Sbjct:   227 PTDNILTQMELVQIWEKLTEKELEKTYVSGNDFLADIEDKEISHQAGLGHFYHIYYEGCL 286

Query:   203 IEPSFG--VEATELYPDVNYTTVDEYLNQFI 231
              +   G   EAT+LYPDV Y  +DEYL  F+
Sbjct:   287 TDHEVGDDEEATKLYPDVKYKRMDEYLKIFV 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
 Identities = 36/113 (31%), Positives = 58/113 (51%)

Query:   139 KYT--TISD--YLDTSV---PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQE- 190
             KYT  T++D   L+ +V   P  N+ +  +LV +WE+  GK L++  +A    L NI++ 
Sbjct:   207 KYTAKTLNDPRTLNKTVNIRPPDNVLTQLELVQIWEKLTGKELEKTNIAAQDFLANIEQM 266

Query:   191 ----KARV--------LGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
                 +A +         G  T+ E+      EA+ LYPDV Y  +D+YL  F+
Sbjct:   267 EIPHQAGIGHFYHIFYEGCLTDHEVGED--EEASSLYPDVKYKRMDDYLRMFL 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00036361001 SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (285 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	231
pfam05368	232	pfam05368, NmrA, NmrA-like family	6e-09
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	3e-08
pfam05368	232	pfam05368, NmrA, NmrA-like family	2e-05
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-05
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	7e-04
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	0.001
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	0.002
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	0.002

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 5/74 (6%)

Query: 7  VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS-GVFDYWGLLEDEK 65
          +LV GA G  G    R S++ GHP  AL+RD  S     L +   + GV    G L+D +
Sbjct: 1  ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKS----ELAKSLKAAGVELVEGDLDDHE 56

Query: 66 SLLEAVKQVDVRFI 79
          SL+EA+K VDV F 
Sbjct: 57 SLVEALKGVDVVFS 70

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 59/299 (19%), Positives = 95/299 (31%), Gaps = 95/299 (31%)

Query: 6   NVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLR--VFHSGVFDYWGLLE 62
            + + GA G +G       +   G     L R S+++ N              DY     
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPV--DY----A 54

Query: 63  DEKSLLEAVKQVDV--------------------------RFIPSEYGAGVFVKDTDVAA 96
             +SL+ A+K VD                           RFIPSE+G    V    + A
Sbjct: 55  SHESLVAALKGVDAVISALGGAAIGDQLKLIDAAIAAGVKRFIPSEFG----VDYDRIGA 110

Query: 97  FTINALDDPRT---------------------------LNKLLHLREIS-HTFNMESSGE 128
             +  L D +                            L  L  + +++  T  +   GE
Sbjct: 111 LPLLDLFDEKRDVRRYLRAKNAGLPWTYVSTGMFLDYLLEPLFGVVDLANRTATIYGDGE 170

Query: 129 LDGTKLYPHLKYTTISDY-------LDTSVPRGN----IYSFN----DLVSLWEEKIGKA 173
              TK      +TT+ D        L       N    +        +L++L E   G+ 
Sbjct: 171 ---TKFA----FTTLEDIGRAVARALTHPDRTLNRVVFVAGDVVTQNELIALVERVTGRK 223

Query: 174 LDRVYVAEDQLLKNIQEKARVLGDQTNFEIEPSFG-----VEATEL-YPDVNYTTVDEY 226
            +R YV+E++LL+ + E A               G     VE ++  Y  +   TV+E 
Sbjct: 224 FERTYVSEEELLEELIEAAPAGLLNYVIAFLHGLGIGGGDVEKSDAEYLGLKVETVEEL 282

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 23/88 (26%), Positives = 29/88 (32%), Gaps = 38/88 (43%)

Query: 86  GVFVKDT-DVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTIS 144
            V + D  D+  + I  LDDPR L                        K           
Sbjct: 176 AVPLDDEEDIGTYVIKILDDPRKLK----------------------GKYIR-------- 205

Query: 145 DYLDTSVPRGNIYSFNDLVSLWEEKIGK 172
                  P GNI S N++  LW +KIGK
Sbjct: 206 -------PPGNILSGNEIAELWSKKIGK 226

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 17/77 (22%)

Query: 6  NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGL----- 60
           VLV+GA G++G H  R  ++ G+   AL+RD +            +   +  G      
Sbjct: 1  KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPS-----------QAEKLEAAGAEVVVG 49

Query: 61 -LEDEKSLLEAVKQVDV 76
           L D +SL  A++ +D 
Sbjct: 50 DLTDAESLAAALEGIDA 66

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 7  VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKS 66
          +L++GA G IG    R  +E GH    L+R +    +            D    L D  S
Sbjct: 1  ILILGATGFIGRALARELLEQGHEVTLLVR-NTKRLSKEDQEPVAVVEGD----LRDLDS 55

Query: 67 LLEAVKQVDV 76
          L +AV+ VDV
Sbjct: 56 LSDAVQGVDV 65

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)

Query: 6  NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK 65
           + +IGA GR G    R ++  GH   AL+RD A           H  +    G + D +
Sbjct: 1  KIAIIGATGRTGSAIVREALARGHEVTALVRDPAKLP------AEHEKLKVVQGDVLDLE 54

Query: 66 SLLEAVKQVDV 76
           + EA++  D 
Sbjct: 55 DVKEALEGQDA 65

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 20/139 (14%)

Query: 6   NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGV-FDYW-GLLED 63
           NVLV GA G IG H T R +  GH   AL  D  ++FN   L        F +  G + D
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRAL--DIYNSFNSWGLLDNAVHDRFHFISGDVRD 58

Query: 64  EKSLLEAVKQVDVRF-------IPSEYGAGVFVKDTDVAAFTINALDDPRTLNKLLHLRE 116
              +   VK+ DV F       IP  Y A +   +T+V   T+N L+    L +    + 
Sbjct: 59  ASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFG-TLNVLEAACVLYR----KR 113

Query: 117 ISHTFNMESSGELDGTKLY 135
           + HT    S+ E+ GT   
Sbjct: 114 VVHT----STSEVYGTAQD 128

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 7  VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKS 66
          +LV GA G +G +  R  +  G+   AL+R  +   +  LL      V    G L D  S
Sbjct: 1  ILVTGATGFLGSNLVRALLAQGYRVRALVRSGS---DAVLL--DGLPVEVVEGDLTDAAS 55

Query: 67 LLEAVKQVDVRF 78
          L  A+K  D  F
Sbjct: 56 LAAAMKGCDRVF 67

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	231
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.77
CHL00194	317	ycf39 Ycf39; Provisional	99.74
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.71
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.67
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.55
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.4
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.32
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.26
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.26
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.24
PLN00016	378	RNA-binding protein; Provisional	99.22
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.14
PLN02214	342	cinnamoyl-CoA reductase	99.11
PLN00198	338	anthocyanidin reductase; Provisional	99.11
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.11
PLN02583	297	cinnamoyl-CoA reductase	99.1
PLN02427	386	UDP-apiose/xylose synthase	99.07
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.06
PLN02206	442	UDP-glucuronate decarboxylase	99.06
PLN02650	351	dihydroflavonol-4-reductase	99.06
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.06
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.05
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.05
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.04
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.04
PRK05865	854	hypothetical protein; Provisional	99.04
PRK07201	657	short chain dehydrogenase; Provisional	99.03
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.02
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.02
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.01
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.01
COG2910	211	Putative NADH-flavin reductase [General function p	98.99
PLN02686	367	cinnamoyl-CoA reductase	98.99
PLN02896	353	cinnamyl-alcohol dehydrogenase	98.98
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	98.97
PRK06179	270	short chain dehydrogenase; Provisional	98.96
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.95
PLN02572	442	UDP-sulfoquinovose synthase	98.94
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	98.94
PLN02260	668	probable rhamnose biosynthetic enzyme	98.94
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.93
PRK05993	277	short chain dehydrogenase; Provisional	98.91
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.91
PRK06180	277	short chain dehydrogenase; Provisional	98.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.89
PRK06182	273	short chain dehydrogenase; Validated	98.88
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.88
PLN03209	576	translocon at the inner envelope of chloroplast su	98.87
PRK10675	338	UDP-galactose-4-epimerase; Provisional	98.87
PLN02653	340	GDP-mannose 4,6-dehydratase	98.87
PRK09135	249	pteridine reductase; Provisional	98.86
PRK09186	256	flagellin modification protein A; Provisional	98.86
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	98.86
PRK07806	248	short chain dehydrogenase; Provisional	98.86
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.86
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.85
PLN02240	352	UDP-glucose 4-epimerase	98.85
PRK06482	276	short chain dehydrogenase; Provisional	98.85
PRK09291	257	short chain dehydrogenase; Provisional	98.85
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.85
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.84
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.84
PRK06194	287	hypothetical protein; Provisional	98.84
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.83
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	98.82
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.82
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.81
PRK08219	227	short chain dehydrogenase; Provisional	98.8
PRK12320	699	hypothetical protein; Provisional	98.79
PRK07454	241	short chain dehydrogenase; Provisional	98.79
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.79
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.79
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.78
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.77
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	98.77
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.76
PRK07814	263	short chain dehydrogenase; Provisional	98.76
PRK12828	239	short chain dehydrogenase; Provisional	98.76
PRK07102	243	short chain dehydrogenase; Provisional	98.76
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.75
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.75
PRK10538	248	malonic semialdehyde reductase; Provisional	98.75
PRK08267	260	short chain dehydrogenase; Provisional	98.73
PRK12829	264	short chain dehydrogenase; Provisional	98.73
PRK05866	293	short chain dehydrogenase; Provisional	98.73
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	98.73
PRK07326	237	short chain dehydrogenase; Provisional	98.73
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.73
PRK06138	252	short chain dehydrogenase; Provisional	98.73
PRK05693	274	short chain dehydrogenase; Provisional	98.72
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.72
PRK07890	258	short chain dehydrogenase; Provisional	98.72
PRK09134	258	short chain dehydrogenase; Provisional	98.72
PRK08265	261	short chain dehydrogenase; Provisional	98.72
PRK06101	240	short chain dehydrogenase; Provisional	98.72
PRK06172	253	short chain dehydrogenase; Provisional	98.72
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	98.72
PRK12937	245	short chain dehydrogenase; Provisional	98.72
PRK08628	258	short chain dehydrogenase; Provisional	98.71
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.71
PRK08643	256	acetoin reductase; Validated	98.71
PRK07774	250	short chain dehydrogenase; Provisional	98.71
PRK08263	275	short chain dehydrogenase; Provisional	98.71
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.71
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.71
PRK05717	255	oxidoreductase; Validated	98.71
PRK07523	255	gluconate 5-dehydrogenase; Provisional	98.7
PRK06914	280	short chain dehydrogenase; Provisional	98.7
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.7
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.69
PRK07074	257	short chain dehydrogenase; Provisional	98.69
PRK08251	248	short chain dehydrogenase; Provisional	98.69
PRK07453	322	protochlorophyllide oxidoreductase; Validated	98.69
PLN02253	280	xanthoxin dehydrogenase	98.68
PRK06924	251	short chain dehydrogenase; Provisional	98.68
PRK05875	276	short chain dehydrogenase; Provisional	98.68
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.68
PRK07024	257	short chain dehydrogenase; Provisional	98.68
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.68
PRK12746	254	short chain dehydrogenase; Provisional	98.67
PRK07023	243	short chain dehydrogenase; Provisional	98.67
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	98.67
PRK08226	263	short chain dehydrogenase; Provisional	98.67
PRK08264	238	short chain dehydrogenase; Validated	98.66
PRK12743	256	oxidoreductase; Provisional	98.66
PRK12939	250	short chain dehydrogenase; Provisional	98.66
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.66
PRK07478	254	short chain dehydrogenase; Provisional	98.66
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.65
PRK05876	275	short chain dehydrogenase; Provisional	98.65
PRK07067	257	sorbitol dehydrogenase; Provisional	98.65
PRK07904	253	short chain dehydrogenase; Provisional	98.65
PRK12827	249	short chain dehydrogenase; Provisional	98.64
PRK06181	263	short chain dehydrogenase; Provisional	98.64
PRK08278	273	short chain dehydrogenase; Provisional	98.64
PRK06057	255	short chain dehydrogenase; Provisional	98.64
PRK08213	259	gluconate 5-dehydrogenase; Provisional	98.63
PRK06196	315	oxidoreductase; Provisional	98.63
PRK05854	313	short chain dehydrogenase; Provisional	98.63
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.63
PRK07063	260	short chain dehydrogenase; Provisional	98.63
PRK05867	253	short chain dehydrogenase; Provisional	98.63
PRK06947	248	glucose-1-dehydrogenase; Provisional	98.62
PRK07109	334	short chain dehydrogenase; Provisional	98.62
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.62
PRK06483	236	dihydromonapterin reductase; Provisional	98.62
PRK07775	274	short chain dehydrogenase; Provisional	98.62
PRK06949	258	short chain dehydrogenase; Provisional	98.62
PRK06398	258	aldose dehydrogenase; Validated	98.62
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.61
PRK05650	270	short chain dehydrogenase; Provisional	98.61
PRK06197	306	short chain dehydrogenase; Provisional	98.61
PRK08177	225	short chain dehydrogenase; Provisional	98.61
PRK08017	256	oxidoreductase; Provisional	98.61
PRK06841	255	short chain dehydrogenase; Provisional	98.61
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	98.61
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.6
PRK12744	257	short chain dehydrogenase; Provisional	98.6
PRK07856	252	short chain dehydrogenase; Provisional	98.6
PRK06500	249	short chain dehydrogenase; Provisional	98.6
PRK06114	254	short chain dehydrogenase; Provisional	98.6
PRK07576	264	short chain dehydrogenase; Provisional	98.6
PRK07577	234	short chain dehydrogenase; Provisional	98.6
PRK08277	278	D-mannonate oxidoreductase; Provisional	98.59
PRK12367	245	short chain dehydrogenase; Provisional	98.59
PRK07825	273	short chain dehydrogenase; Provisional	98.59
PRK06128	300	oxidoreductase; Provisional	98.59
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.58
PRK08085	254	gluconate 5-dehydrogenase; Provisional	98.58
PRK08339	263	short chain dehydrogenase; Provisional	98.58
PRK07097	265	gluconate 5-dehydrogenase; Provisional	98.58
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	98.58
PRK12938	246	acetyacetyl-CoA reductase; Provisional	98.58
PRK09072	263	short chain dehydrogenase; Provisional	98.57
PRK06523	260	short chain dehydrogenase; Provisional	98.57
PRK05884	223	short chain dehydrogenase; Provisional	98.57
PRK08589	272	short chain dehydrogenase; Validated	98.57
PRK06123	248	short chain dehydrogenase; Provisional	98.56
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	98.56
PRK06701	290	short chain dehydrogenase; Provisional	98.56
PRK06139	330	short chain dehydrogenase; Provisional	98.56
PRK07060	245	short chain dehydrogenase; Provisional	98.55
PRK12824	245	acetoacetyl-CoA reductase; Provisional	98.55
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.55
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	98.55
PRK05855	582	short chain dehydrogenase; Validated	98.54
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.54
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.53
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.53
PRK12747	252	short chain dehydrogenase; Provisional	98.53
TIGR02415	254	23BDH acetoin reductases. One member of this famil	98.53
PRK12742	237	oxidoreductase; Provisional	98.53
PRK06124	256	gluconate 5-dehydrogenase; Provisional	98.52
PRK06198	260	short chain dehydrogenase; Provisional	98.52
PRK08340	259	glucose-1-dehydrogenase; Provisional	98.52
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	98.52
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	98.52
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.51
PRK07677	252	short chain dehydrogenase; Provisional	98.5
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	98.5
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	98.5
PRK07062	265	short chain dehydrogenase; Provisional	98.5
PLN02996	491	fatty acyl-CoA reductase	98.49
PRK06953	222	short chain dehydrogenase; Provisional	98.49
PRK07035	252	short chain dehydrogenase; Provisional	98.49
PRK08936	261	glucose-1-dehydrogenase; Provisional	98.47
PRK07985	294	oxidoreductase; Provisional	98.47
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.47
PLN02503	605	fatty acyl-CoA reductase 2	98.47
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	98.47
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.46
PRK07832	272	short chain dehydrogenase; Provisional	98.46
PRK08309	177	short chain dehydrogenase; Provisional	98.45
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.44
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.44
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.43
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	98.43
PRK09242	257	tropinone reductase; Provisional	98.42
PRK07201	657	short chain dehydrogenase; Provisional	98.4
PRK06125	259	short chain dehydrogenase; Provisional	98.4
PRK07831	262	short chain dehydrogenase; Provisional	98.39
PLN02778	298	3,5-epimerase/4-reductase	98.38
PRK07791	286	short chain dehydrogenase; Provisional	98.38
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.38
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.37
PRK08303	305	short chain dehydrogenase; Provisional	98.37
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.36
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.36
PRK09009	235	C factor cell-cell signaling protein; Provisional	98.36
PRK05872	296	short chain dehydrogenase; Provisional	98.35
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	98.35
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.35
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.34
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.33
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	98.33
PRK07069	251	short chain dehydrogenase; Validated	98.33
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	98.32
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.32
PRK08703	239	short chain dehydrogenase; Provisional	98.32
PRK08862	227	short chain dehydrogenase; Provisional	98.31
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.3
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.3
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	98.29
PRK07041	230	short chain dehydrogenase; Provisional	98.29
PRK06940	275	short chain dehydrogenase; Provisional	98.28
PRK05599	246	hypothetical protein; Provisional	98.27
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.27
PRK06484	520	short chain dehydrogenase; Validated	98.25
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.25
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.25
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.24
PRK06484	520	short chain dehydrogenase; Validated	98.24
PRK06720	169	hypothetical protein; Provisional	98.24
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.23
PRK08324	681	short chain dehydrogenase; Validated	98.22
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.2
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	98.2
PRK07578	199	short chain dehydrogenase; Provisional	98.19
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.18
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.18
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.18
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.17
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.16
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.16
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.15
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.15
PLN02780	320	ketoreductase/ oxidoreductase	98.14
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.1
COG1028	251	FabG Dehydrogenases with different specificities (	98.1
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.08
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.06
KOG1208	314	consensus Dehydrogenases with different specificit	98.06
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.99
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.97
PLN00015	308	protochlorophyllide reductase	97.92
PRK09620	229	hypothetical protein; Provisional	97.9
KOG1611	249	consensus Predicted short chain-type dehydrogenase	97.89
PLN02260	668	probable rhamnose biosynthetic enzyme	97.88
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	97.88
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.79
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.78
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.78
KOG0725	270	consensus Reductases with broad range of substrate	97.76
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.75
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.71
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.66
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.64
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	97.62
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.59
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	97.54
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.54
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.54
PRK09496	453	trkA potassium transporter peripheral membrane com	97.53
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.48
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.46
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.45
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.45
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.41
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	97.4
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.4
PRK14982	340	acyl-ACP reductase; Provisional	97.37
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.36
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.33
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.15
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.12
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	97.1
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.0
PRK09496	453	trkA potassium transporter peripheral membrane com	96.9
PLN00106	323	malate dehydrogenase	96.87
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.86
KOG2774	366	consensus NAD dependent epimerase [General functio	96.86
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.85
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.85
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	96.8
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.8
PTZ00325	321	malate dehydrogenase; Provisional	96.79
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.77
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.76
PRK10669	558	putative cation:proton antiport protein; Provision	96.7
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.63
KOG2733	423	consensus Uncharacterized membrane protein [Functi	96.62
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.59
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.59
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.55
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.44
PRK05086	312	malate dehydrogenase; Provisional	96.42
PRK05442	326	malate dehydrogenase; Provisional	96.4
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.38
PLN02383	344	aspartate semialdehyde dehydrogenase	96.33
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.31
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.31
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.28
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.23
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	96.22
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.17
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.15
PRK06849	389	hypothetical protein; Provisional	96.11
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.11
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.08
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.07
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.07
PRK10537	393	voltage-gated potassium channel; Provisional	96.02
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	96.01
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.99
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.87
PRK04148	134	hypothetical protein; Provisional	95.85
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.78
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	95.74
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	95.73
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	95.72
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	95.65
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.64
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.59
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.56
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	95.55
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.53
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	95.53
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	95.52
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.48
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	95.47
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.47
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.45
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	95.45
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.45
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	95.43
PRK06444	197	prephenate dehydrogenase; Provisional	95.42
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.41
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	95.4
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.4
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.37
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	95.34
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	95.34
PRK08655	437	prephenate dehydrogenase; Provisional	95.32
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	95.21
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	95.2
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.13
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.13
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.1
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.03
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.0
PLN02948	577	phosphoribosylaminoimidazole carboxylase	94.98
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	94.97
COG3268	382	Uncharacterized conserved protein [Function unknow	94.96
PRK00048	257	dihydrodipicolinate reductase; Provisional	94.92
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	94.88
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	94.87
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	94.87
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.86
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.76
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	94.75
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.71
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.68
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	94.67
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.64
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.63
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	94.57
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	94.55
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	94.49
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.46
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	94.44
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.44
PLN02688	266	pyrroline-5-carboxylate reductase	94.41
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	94.41
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	94.36
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.32
PRK08163	396	salicylate hydroxylase; Provisional	94.29
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.27
PRK12409	410	D-amino acid dehydrogenase small subunit; Provisio	94.22
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.19
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.17
PRK06847	375	hypothetical protein; Provisional	94.13
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	94.1
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	94.08
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	94.05
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	93.99
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	93.97
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.96
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	93.96
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	93.83
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.79
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.76
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	93.73
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	93.73
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	93.71
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	93.7
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	93.69
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	93.67
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	93.67
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	93.65
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	93.64
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	93.64
PRK08818	370	prephenate dehydrogenase; Provisional	93.63
PLN00203	519	glutamyl-tRNA reductase	93.61
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	93.59
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.56
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.56
PRK00711	416	D-amino acid dehydrogenase small subunit; Validate	93.55
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.54
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	93.52
PRK05479	330	ketol-acid reductoisomerase; Provisional	93.52
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.51
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	93.47
PLN02494	477	adenosylhomocysteinase	93.45
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	93.43
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	93.41
PRK06545	359	prephenate dehydrogenase; Validated	93.41
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	93.4
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	93.4
PRK05562	223	precorrin-2 dehydrogenase; Provisional	93.39
COG0665	387	DadA Glycine/D-amino acid oxidases (deaminating) [	93.37
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.36
PRK13940	414	glutamyl-tRNA reductase; Provisional	93.35
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.32
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	93.26
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.18
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.13
PRK07417	279	arogenate dehydrogenase; Reviewed	93.1
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.07
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	93.05
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.03
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.03
PRK07236	386	hypothetical protein; Provisional	93.01
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	92.87
PLN02928	347	oxidoreductase family protein	92.87
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	92.8
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	92.76
TIGR00877	423	purD phosphoribosylamine--glycine ligase. This enz	92.74
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.73
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	92.73
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	92.7
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	92.63
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	92.62
PTZ00082	321	L-lactate dehydrogenase; Provisional	92.59
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	92.58
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.55
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	92.55
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.35
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	92.35
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.29
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	92.28
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.25
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	92.14
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.07
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	92.05
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	92.05
PRK07574	385	formate dehydrogenase; Provisional	92.04
PRK07208	479	hypothetical protein; Provisional	92.03
PRK13403	335	ketol-acid reductoisomerase; Provisional	91.97
PLN02256	304	arogenate dehydrogenase	91.97
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	91.91
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	91.83
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	91.81
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.76
PRK11259	376	solA N-methyltryptophan oxidase; Provisional	91.76
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	91.69
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	91.62
PLN02353	473	probable UDP-glucose 6-dehydrogenase	91.57
PLN02602	350	lactate dehydrogenase	91.52
KOG4288	283	consensus Predicted oxidoreductase [General functi	91.38
KOG2304	298	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	91.33

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.77  E-value=1.1e-17  Score=140.77  Aligned_cols=67  Identities=15%  Similarity=0.118  Sum_probs=56.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHH------cc-CCEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAV------KQ-VDVRF   78 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al------~~-~d~~f   78 (231)
                      +|+||||||++|++++++|+++|++|++++|+.+.   .   .  ..++..+.+|++|++++..++      ++ +|.+|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~---~---~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~   72 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSS---S---A--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY   72 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc---c---c--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence            48999999999999999999999999999998642   1   0  146677889999999999999      56 88887


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      +.
T Consensus        73 ~~   74 (285)
T TIGR03649        73 LV   74 (285)
T ss_pred             Ee
Confidence            63

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.74  E-value=9e-17  Score=137.50  Aligned_cols=70  Identities=26%  Similarity=0.325  Sum_probs=60.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+|+|||||||+|++++++|+++||+|++++|+.+.   ..   .+. .+++++.+|++|++++.++++++|++|+.
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~---~~---~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~   71 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK---AS---FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDA   71 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH---hh---hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEEC
Confidence            589999999999999999999999999999997531   11   122 57899999999999999999999998874

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.71  E-value=1.2e-16  Score=130.80  Aligned_cols=69  Identities=30%  Similarity=0.356  Sum_probs=57.5

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |+|+||||.+|++++++|++.+++|++++|+.+    .+..+.+. .+++++.+|+.|.+++.++++++|.+|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~----~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~   70 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS----SDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFS   70 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH----HHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc----hhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEe
Confidence            799999999999999999999999999999863    22233444 7899999999999999999999998443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.67  E-value=1.8e-15  Score=127.42  Aligned_cols=77  Identities=25%  Similarity=0.221  Sum_probs=66.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|+|||||||||++|++.|+++||.|++.+|++....+.+++..++   .+..++.+|+.|++++.+++++||.+||.
T Consensus         6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~   85 (327)
T KOG1502|consen    6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHT   85 (327)
T ss_pred             CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEe
Confidence            589999999999999999999999999999999986422334555554   45889999999999999999999999983

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.55  E-value=4e-13  Score=118.18  Aligned_cols=78  Identities=26%  Similarity=0.253  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch---hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cC
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF---NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QV   74 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~---~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~   74 (231)
                      .++++|+||||||+||++++++|+++|++|++++|+.+...   ..........+++++.+|++|.+++.++++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            34679999999999999999999999999999999764210   000001111578899999999999999998    48


Q ss_pred             CEEEE
Q 043777           75 DVRFI   79 (231)
Q Consensus        75 d~~f~   79 (231)
                      |++++
T Consensus       138 D~Vi~  142 (390)
T PLN02657        138 DVVVS  142 (390)
T ss_pred             cEEEE
Confidence            99886

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.40  E-value=6.4e-12  Score=104.08  Aligned_cols=70  Identities=27%  Similarity=0.258  Sum_probs=56.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ--VDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~--~d~~f~   79 (231)
                      |+||||||+|+||+|.+.+|+++|++|++++.-...+.  +   .+. ...+++++|+.|.+.|.+.++.  +|.++|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~--~---~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK--I---ALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCH--H---HhhhccCceEEeccccHHHHHHHHHhcCCCEEEE
Confidence            57999999999999999999999999999988654321  1   122 1268999999999999999986  666443

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.32  E-value=7.2e-11  Score=100.77  Aligned_cols=70  Identities=31%  Similarity=0.306  Sum_probs=59.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+|+||||+|+||+++++.|+++|++|++++|+....      ..+. .++.++.+|++|.+++.++++++|++++.
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~   71 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR------RNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHV   71 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc------cccccCCceEEEeeCCCHHHHHHHHhCCCEEEEe
Confidence            5799999999999999999999999999999975321      1122 46889999999999999999999987763

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.26  E-value=1.8e-10  Score=99.79  Aligned_cols=78  Identities=17%  Similarity=0.051  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhh---hc-CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRV---FH-SGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~---~~-~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      +|+|+|||||||||++|+++|+++|++|++++|......  .......   .. .++.++.+|++|.+.+.++++++|++
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~V   94 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYV   94 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEE
Confidence            579999999999999999999999999999998643211  0100000   11 35778899999999999999999997


Q ss_pred             EEcc
Q 043777           78 FIPS   81 (231)
Q Consensus        78 f~ps   81 (231)
                      +|-+
T Consensus        95 iHlA   98 (348)
T PRK15181         95 LHQA   98 (348)
T ss_pred             EECc
Confidence            7743

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.26  E-value=2.5e-10  Score=94.96  Aligned_cols=69  Identities=32%  Similarity=0.410  Sum_probs=59.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |+|+||||||++|++++++|++.|++|++++|+...   ..   .+..++.+..+|+.+...+..++++++.+++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~---~~---~~~~~v~~~~~d~~~~~~l~~a~~G~~~~~~   69 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEA---AA---ALAGGVEVVLGDLRDPKSLVAGAKGVDGVLL   69 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHH---HH---hhcCCcEEEEeccCCHhHHHHHhccccEEEE
Confidence            579999999999999999999999999999998642   11   1116889999999999999999999998665

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.24  E-value=2.9e-11  Score=101.87  Aligned_cols=110  Identities=25%  Similarity=0.265  Sum_probs=74.0

Q ss_pred             EEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcccC
Q 043777            8 LVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEY   83 (231)
Q Consensus         8 lVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~   83 (231)
                      |||||+||+|++|+++|+++|  ++|++++|.....    ....+.  ....++++|++|++++.++++++|++||.+..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~----~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~   76 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPK----FLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAP   76 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccc----cchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcc
Confidence            699999999999999999999  7899888875421    111122  33348999999999999999999999996443


Q ss_pred             CCcc-------eeechhHHHH-HHHhhcCccccCceEEEeeeeeeee
Q 043777           84 GAGV-------FVKDTDVAAF-TINALDDPRTLNKLLHLREISHTFN  122 (231)
Q Consensus        84 g~~~-------~~~~~di~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  122 (231)
                      ....       +...+--|+- .+.++. .....+.+++++.+..+.
T Consensus        77 ~~~~~~~~~~~~~~vNV~GT~nvl~aa~-~~~VkrlVytSS~~vv~~  122 (280)
T PF01073_consen   77 VPPWGDYPPEEYYKVNVDGTRNVLEAAR-KAGVKRLVYTSSISVVFD  122 (280)
T ss_pred             ccccCcccHHHHHHHHHHHHHHHHHHHH-HcCCCEEEEEcCcceeEe
Confidence            2110       1111111221 222222 235778899988877765

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00016 RNA-binding protein; Provisional

Probab=99.22  E-value=1.5e-10  Score=101.44  Aligned_cols=75  Identities=27%  Similarity=0.399  Sum_probs=51.5

Q ss_pred             CCeEEEE----cCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhh-----hhhhhhc-CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVI----GAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNF-----SLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVt----GatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~-----~~~~~~~-~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      +++||||    |||||||++++++|+++||+|++++|+.......     .....+. .+++++.+|+.|.+.+. ...+
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~~  130 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGAG  130 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccCC
Confidence            4789999    9999999999999999999999999986421000     0011222 46888899987733222 1235


Q ss_pred             CCEEEE
Q 043777           74 VDVRFI   79 (231)
Q Consensus        74 ~d~~f~   79 (231)
                      +|++++
T Consensus       131 ~d~Vi~  136 (378)
T PLN00016        131 FDVVYD  136 (378)
T ss_pred             ccEEEe
Confidence            676554

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.14  E-value=2.7e-10  Score=89.47  Aligned_cols=97  Identities=27%  Similarity=0.318  Sum_probs=71.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcccCCCc
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAG   86 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~g~~   86 (231)
                      |+|+||||++|+.++++|+++|++|++++|+.++   .+   . ..+++++.+|+.|++++.++++++|++|+...-...
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~---~~---~-~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSK---AE---D-SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGG---HH---H-CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchh---cc---c-ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence            7999999999999999999999999999998642   11   1 478999999999999999999999999875422111


Q ss_pred             ceeechhHHHHHHHhhcCccccCceEEEe
Q 043777           87 VFVKDTDVAAFTINALDDPRTLNKLLHLR  115 (231)
Q Consensus        87 ~~~~~~di~~~~~~~~~~~~~~~~~~~~~  115 (231)
                          ..+.....+.++... ...+.++++
T Consensus        74 ----~~~~~~~~~~a~~~~-~~~~~v~~s   97 (183)
T PF13460_consen   74 ----DVDAAKNIIEAAKKA-GVKRVVYLS   97 (183)
T ss_dssp             ----HHHHHHHHHHHHHHT-TSSEEEEEE
T ss_pred             ----ccccccccccccccc-ccccceeee
Confidence                133344444444332 244566655

...

>PLN02214 cinnamoyl-CoA reductase

Probab=99.11  E-value=6.1e-10  Score=96.38  Aligned_cols=78  Identities=22%  Similarity=0.185  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +|+|+||||+||||++++++|+++|++|++++|+..... ...+..+.   .++.++.+|++|.+++.++++++|++|+.
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   88 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPK-NTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT   88 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhh-HHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence            578999999999999999999999999999999753211 11111221   35778899999999999999999999886


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      ..
T Consensus        89 A~   90 (342)
T PLN02214         89 AS   90 (342)
T ss_pred             cC
Confidence            53

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.11  E-value=3.8e-10  Score=97.27  Aligned_cols=79  Identities=20%  Similarity=0.267  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +++|+||||+||||++++++|+++|++|+++.|+............+.  .++.++.+|++|.+++.++++++|++|+.+
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   88 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVA   88 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeC
Confidence            578999999999999999999999999999998754211111111122  257889999999999999999999999855


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        89 ~   89 (338)
T PLN00198         89 T   89 (338)
T ss_pred             C
Confidence            4

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.11  E-value=2.9e-10  Score=97.09  Aligned_cols=79  Identities=20%  Similarity=0.165  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .++|+|||||||||++++++|+++|++|++++|+.........+...   ..++.++.+|++|++.+.++++++|++||.
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            57899999999999999999999999999999975421111111111   136788999999999999999999999885


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      +.
T Consensus        84 A~   85 (322)
T PLN02662         84 AS   85 (322)
T ss_pred             CC
Confidence            43

>PLN02583 cinnamoyl-CoA reductase

Probab=99.10  E-value=5e-10  Score=94.98  Aligned_cols=78  Identities=19%  Similarity=0.181  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ++++|+||||||+||++++++|+++|++|+++.|+.......+.+..+.   .++.++.+|++|.+++.+++.++|.+++
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            3578999999999999999999999999999999642211111122221   3578899999999999999999999886


Q ss_pred             c
Q 043777           80 P   80 (231)
Q Consensus        80 p   80 (231)
                      .
T Consensus        85 ~   85 (297)
T PLN02583         85 C   85 (297)
T ss_pred             e
Confidence            3

>PLN02427 UDP-apiose/xylose synthase

Probab=99.07  E-value=5.6e-10  Score=98.05  Aligned_cols=78  Identities=19%  Similarity=0.149  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhh----hhcCCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLR----VFHSGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~----~~~~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      .|+|+|||||||||++++++|+++ |++|++++|.....  .....    ....+++++.+|++|.+.+.++++++|++|
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            578999999999999999999998 59999998864321  11110    011468899999999999999999999999


Q ss_pred             EcccC
Q 043777           79 IPSEY   83 (231)
Q Consensus        79 ~ps~~   83 (231)
                      |-+..
T Consensus        92 HlAa~   96 (386)
T PLN02427         92 NLAAI   96 (386)
T ss_pred             Ecccc
Confidence            86543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.06  E-value=3.7e-09  Score=88.82  Aligned_cols=32  Identities=25%  Similarity=0.418  Sum_probs=30.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +|+||||||+||++++++|+++|++|+++.|.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            58999999999999999999999999999886

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.06  E-value=4.6e-09  Score=93.93  Aligned_cols=70  Identities=16%  Similarity=0.152  Sum_probs=48.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .|+|+|||||||||++|+++|+++|++|++++|...... ......+. .+++++.+|+.+.     ++.++|++||
T Consensus       119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~-~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViH  189 (442)
T PLN02206        119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRK-ENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYH  189 (442)
T ss_pred             CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccch-hhhhhhccCCceEEEECCccCh-----hhcCCCEEEE
Confidence            589999999999999999999999999999987532111 11111122 4566677776554     2345666665

>PLN02650 dihydroflavonol-4-reductase

Probab=99.06  E-value=7.8e-10  Score=95.85  Aligned_cols=80  Identities=26%  Similarity=0.208  Sum_probs=61.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .+++|||||||||||++++++|+++|++|++++|+.........+....   ..+.++.+|++|.+.+.++++++|.++|
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            3689999999999999999999999999999999753211000010111   2477899999999999999999999888


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      .+.
T Consensus        84 ~A~   86 (351)
T PLN02650         84 VAT   86 (351)
T ss_pred             eCC
Confidence            553

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.06  E-value=6.7e-10  Score=97.16  Aligned_cols=76  Identities=22%  Similarity=0.060  Sum_probs=60.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+.+|+|+|||||||||+++++.|+++||+|++++|.....     .......+.++.+|++|.+.+..+++++|++|+-
T Consensus        18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   92 (370)
T PLN02695         18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH-----MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNL   92 (370)
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc-----cccccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence            44578999999999999999999999999999999864210     0110123567889999999999999999998875


Q ss_pred             c
Q 043777           81 S   81 (231)
Q Consensus        81 s   81 (231)
                      .
T Consensus        93 A   93 (370)
T PLN02695         93 A   93 (370)
T ss_pred             c
Confidence            4

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.05  E-value=1.1e-09  Score=94.20  Aligned_cols=81  Identities=21%  Similarity=0.323  Sum_probs=63.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      |.++|+|+||||+|+||++++++|+++|  +.|++++|+....  ......+. .++.++.+|++|.+.+.++++++|++
T Consensus         1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~--~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~V   78 (324)
T TIGR03589         1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ--WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYV   78 (324)
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH--HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEE
Confidence            4557899999999999999999999986  7888888864311  11111222 46788999999999999999999999


Q ss_pred             EEcccC
Q 043777           78 FIPSEY   83 (231)
Q Consensus        78 f~ps~~   83 (231)
                      ++....
T Consensus        79 ih~Ag~   84 (324)
T TIGR03589        79 VHAAAL   84 (324)
T ss_pred             EECccc
Confidence            986543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.05  E-value=5.1e-09  Score=93.46  Aligned_cols=70  Identities=16%  Similarity=0.174  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .|||+|||||||||++|+++|+++|++|++++|...... ........ .++.++.+|+.+.     ++.++|++||
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~-~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViH  190 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRK-ENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYH  190 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccH-hHhhhhccCCceEEEECccccc-----cccCCCEEEE
Confidence            479999999999999999999999999999988632111 11111111 3456666676543     2346676665

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.04  E-value=1e-09  Score=93.98  Aligned_cols=79  Identities=22%  Similarity=0.170  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|+|||||||||++++++|+++|++|+++.|+.........+...   ..+++++.+|++|.+++.++++++|++++.
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   84 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT   84 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence            57999999999999999999999999999999976431111111111   146788999999999999999999999885


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      +.
T Consensus        85 A~   86 (322)
T PLN02986         85 AS   86 (322)
T ss_pred             CC
Confidence            43

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.04  E-value=7.9e-09  Score=85.67  Aligned_cols=96  Identities=21%  Similarity=0.189  Sum_probs=69.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCC--EEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHP--KFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~--v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~f   78 (231)
                      |++|||||+||||+..++.++++..+  |+.++.-.-.. ..+.+..+.  ++..++++|++|.+.+.++++.  +|++.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAg-n~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAG-NLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccC-CHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            57999999999999999999998643  56555432211 122223333  6899999999999999999995  67654


Q ss_pred             E--------cccCCCcceeechhHHHHHHHh
Q 043777           79 I--------PSEYGAGVFVKDTDVAAFTINA  101 (231)
Q Consensus        79 ~--------ps~~g~~~~~~~~di~~~~~~~  101 (231)
                      +        -|-.++..|+..+-++++++..
T Consensus        80 hfAAESHVDRSI~~P~~Fi~TNv~GT~~LLE  110 (340)
T COG1088          80 HFAAESHVDRSIDGPAPFIQTNVVGTYTLLE  110 (340)
T ss_pred             EechhccccccccChhhhhhcchHHHHHHHH
Confidence            3        1233556788889999887643

>PRK05865 hypothetical protein; Provisional

Probab=99.04  E-value=5.2e-09  Score=99.39  Aligned_cols=70  Identities=21%  Similarity=0.203  Sum_probs=59.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      |+|+|||||||||++++++|+++|++|++++|+...        ....++.++.+|++|.+++.++++++|++++.+.
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~--------~~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa   70 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD--------SWPSSADFIAADIRDATAVESAMTGADVVAHCAW   70 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh--------hcccCceEEEeeCCCHHHHHHHHhCCCEEEECCC
Confidence            579999999999999999999999999999986421        1124678899999999999999999999988653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.03  E-value=7.1e-09  Score=96.96  Aligned_cols=75  Identities=19%  Similarity=0.189  Sum_probs=54.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHH--hCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCH------HHHHHHHccCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSI--EYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDE------KSLLEAVKQVD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~--~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~------~~l~~al~~~d   75 (231)
                      |+|||||||||||++++++|+  +.|++|++++|+............+. .+++++.+|++|+      +.+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            579999999999999999999  57899999999643211111111122 5688899999984      455555 8889


Q ss_pred             EEEEc
Q 043777           76 VRFIP   80 (231)
Q Consensus        76 ~~f~p   80 (231)
                      ++|+.
T Consensus        80 ~Vih~   84 (657)
T PRK07201         80 HVVHL   84 (657)
T ss_pred             EEEEC
Confidence            87763

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.02  E-value=7.2e-09  Score=85.80  Aligned_cols=82  Identities=18%  Similarity=0.173  Sum_probs=63.1

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCCHHHHHHHHc-----
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      .++++++|||||++||..+++.|.++|++++++.|+.+.  ..++.+++.    ..+.++.+|+++++++.+..+     
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~k--L~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDK--LEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHH--HHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            346799999999999999999999999999999998643  111222222    456789999999998877665     


Q ss_pred             --cCCEEEEcccCCC
Q 043777           73 --QVDVRFIPSEYGA   85 (231)
Q Consensus        73 --~~d~~f~ps~~g~   85 (231)
                        .+|+..-.+.||.
T Consensus        82 ~~~IdvLVNNAG~g~   96 (265)
T COG0300          82 GGPIDVLVNNAGFGT   96 (265)
T ss_pred             CCcccEEEECCCcCC
Confidence              3677776777765

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.02  E-value=1.5e-09  Score=93.90  Aligned_cols=74  Identities=19%  Similarity=0.278  Sum_probs=59.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCC-CHHHHHHHHccCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLE-DEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~-d~~~l~~al~~~d~~f~ps   81 (231)
                      |+|+|||||||||++|+++|++. |++|++++|+...   .  ..... .+++++.+|+. +.+.+.++++++|+++|-+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~---~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a   76 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDR---L--GDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLV   76 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHH---H--HHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence            58999999999999999999986 6999999986421   1  01112 46889999997 7788889999999999855


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus        77 a~   78 (347)
T PRK11908         77 AI   78 (347)
T ss_pred             cc
Confidence            44

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.01  E-value=9.9e-09  Score=86.99  Aligned_cols=75  Identities=17%  Similarity=0.118  Sum_probs=56.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVRFI   79 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~f~   79 (231)
                      +|+||||||+||++++++|+++|  ++|+++.|...... .+.+..+.  .++.++.+|++|++++.+++++  +|++++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN-LENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh-hhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence            58999999999999999999987  67888776431110 11111221  4678899999999999999988  899877


Q ss_pred             cc
Q 043777           80 PS   81 (231)
Q Consensus        80 ps   81 (231)
                      .+
T Consensus        80 ~a   81 (317)
T TIGR01181        80 FA   81 (317)
T ss_pred             cc
Confidence            44

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.01  E-value=1.6e-09  Score=93.64  Aligned_cols=78  Identities=19%  Similarity=0.144  Sum_probs=59.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc--h-hhhhhhhh----cCCcEEEEEcCCCHHHHHHHHcc--CC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN--F-NFSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQ--VD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~--~-~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~--~d   75 (231)
                      |+|||||||||||++++++|++.|++|++++|.....  . ........    ..++.++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999875320  0 01000000    13578899999999999999986  59


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      +++|.+.
T Consensus        81 ~ViH~Aa   87 (343)
T TIGR01472        81 EIYNLAA   87 (343)
T ss_pred             EEEECCc
Confidence            9888554

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.99  E-value=4.9e-09  Score=81.17  Aligned_cols=68  Identities=22%  Similarity=0.281  Sum_probs=59.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |||.|+||||.+|++|+++.+++||+|++++|+.++-      ..+ +++.+++.|+.|++++.+.+.+.|+++.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~------~~~-~~~~i~q~Difd~~~~a~~l~g~DaVIs   68 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKL------AAR-QGVTILQKDIFDLTSLASDLAGHDAVIS   68 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhc------ccc-ccceeecccccChhhhHhhhcCCceEEE
Confidence            6899999999999999999999999999999986431      111 6788999999999999999999998664

>PLN02686 cinnamoyl-CoA reductase

Probab=98.99  E-value=1.6e-09  Score=94.71  Aligned_cols=76  Identities=21%  Similarity=0.243  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---------cCCcEEEEEcCCCHHHHHHHHccC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---------HSGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---------~~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      +|+|+||||+||||++++++|+++|++|+++.|+...   .+.+..+         ..++.++.+|++|.+++.++++++
T Consensus        53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~---~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~  129 (367)
T PLN02686         53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQED---KEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC  129 (367)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence            6789999999999999999999999999998886431   1111111         124778899999999999999999


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |.+|+.+.
T Consensus       130 d~V~hlA~  137 (367)
T PLN02686        130 AGVFHTSA  137 (367)
T ss_pred             cEEEecCe
Confidence            99887543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=98.98  E-value=2.2e-09  Score=93.18  Aligned_cols=77  Identities=29%  Similarity=0.337  Sum_probs=61.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .|+||||||+||||++++++|+++|++|+++.|+....  ......+.  .++.++.+|++|.+.+.++++++|++++.+
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKS--LHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHH--HHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            68999999999999999999999999999998875321  11112221  457889999999999999999999988854


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        88 ~   88 (353)
T PLN02896         88 A   88 (353)
T ss_pred             c
Confidence            3

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=98.97  E-value=3.1e-09  Score=91.05  Aligned_cols=82  Identities=23%  Similarity=0.162  Sum_probs=62.7

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-c--CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            1 MAG-KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-H--SGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         1 M~~-~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-~--~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |.. +|+++||||+||||++++++|+++|++|+++.|+.........+... .  .++.++.+|++|.+++.++++++|+
T Consensus         1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   80 (325)
T PLN02989          1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCET   80 (325)
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCE
Confidence            443 58999999999999999999999999999888875421111001011 1  3578889999999999999999999


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++.+.
T Consensus        81 vih~A~   86 (325)
T PLN02989         81 VFHTAS   86 (325)
T ss_pred             EEEeCC
Confidence            888554

>PRK06179 short chain dehydrogenase; Provisional

Probab=98.96  E-value=3e-09  Score=88.60  Aligned_cols=76  Identities=25%  Similarity=0.197  Sum_probs=62.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      |+++++++||||+|+||++++++|+++|++|++++|+...   .   .. ..++.++.+|++|++++.+++++       
T Consensus         1 m~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~---~---~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR---A---AP-IPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh---c---cc-cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            7777899999999999999999999999999999997531   0   01 15678899999999999988875       


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++.+..
T Consensus        74 ~d~li~~ag~   83 (270)
T PRK06179         74 IDVLVNNAGV   83 (270)
T ss_pred             CCEEEECCCC
Confidence            5888876544

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.95  E-value=4.2e-09  Score=91.27  Aligned_cols=77  Identities=21%  Similarity=0.321  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVKQ--VDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~~--~d~~f~   79 (231)
                      +|+|+||||+||||+++++.|+++|++|++++|+.....  ......  ...+.++.+|++|.+++.+++++  +|++++
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih   81 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSP--NLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH   81 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccch--hHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence            589999999999999999999999999999998764311  111111  13567889999999999999986  588887


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      ...
T Consensus        82 ~A~   84 (349)
T TIGR02622        82 LAA   84 (349)
T ss_pred             CCc
Confidence            654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02572 UDP-sulfoquinovose synthase

Probab=98.94  E-value=4.3e-09  Score=94.13  Aligned_cols=78  Identities=23%  Similarity=0.157  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchh--------------hhhhhh---hc-CCcEEEEEcCCCHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFN--------------FSLLRV---FH-SGVFDYWGLLEDEK   65 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~--------------~~~~~~---~~-~~v~~~~~D~~d~~   65 (231)
                      +|+|+||||+||||++|+++|+++|++|++++|.....+.              ...++.   .. .+++++.+|++|.+
T Consensus        47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~  126 (442)
T PLN02572         47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFE  126 (442)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHH
Confidence            5789999999999999999999999999998753211000              000111   11 36889999999999


Q ss_pred             HHHHHHcc--CCEEEEcc
Q 043777           66 SLLEAVKQ--VDVRFIPS   81 (231)
Q Consensus        66 ~l~~al~~--~d~~f~ps   81 (231)
                      .+.+++++  +|++||.+
T Consensus       127 ~v~~~l~~~~~D~ViHlA  144 (442)
T PLN02572        127 FLSEAFKSFEPDAVVHFG  144 (442)
T ss_pred             HHHHHHHhCCCCEEEECC
Confidence            99999985  79999865

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=98.94  E-value=2.5e-08  Score=83.74  Aligned_cols=71  Identities=25%  Similarity=0.273  Sum_probs=54.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh-c--CCcEEEEEcCCCHHHHHHHHccC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF-H--SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~-~--~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      .++||||||+||||+|.+-+|++.|+.|.+++.-..... .-+..+.+ .  ..+.++++|++|.+.|++.++..
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc
Confidence            378999999999999999999999999999876432211 11111111 2  67899999999999999999863

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.94  E-value=2.6e-08  Score=93.52  Aligned_cols=77  Identities=17%  Similarity=0.050  Sum_probs=56.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHH--ccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAV--KQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al--~~~d~~f   78 (231)
                      .|+|||||||||||++++++|+++  +++|++++|............... .+++++.+|++|.+.+..++  .++|+++
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            589999999999999999999998  578888887431111011111111 57889999999999888776  5689877


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      +-
T Consensus        86 Hl   87 (668)
T PLN02260         86 HF   87 (668)
T ss_pred             EC
Confidence            63

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.93  E-value=6.2e-09  Score=85.80  Aligned_cols=82  Identities=16%  Similarity=0.088  Sum_probs=61.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      |..+++++||||+|+||++++++|+++|++|.+++|+..... ..+.+......+.++.+|++|.+++.++++       
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            455689999999999999999999999999999999754211 111111112457789999999999888776       


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      .+|++++.+.
T Consensus        81 ~~d~vi~~a~   90 (258)
T PRK12429         81 GVDILVNNAG   90 (258)
T ss_pred             CCCEEEECCC
Confidence            3688877543

>PRK05993 short chain dehydrogenase; Provisional

Probab=98.91  E-value=6.3e-09  Score=87.26  Aligned_cols=78  Identities=24%  Similarity=0.320  Sum_probs=61.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      |.++++++||||+|+||++++++|.++|++|++++|+...      +..+. .++.++.+|++|.+++.++++.      
T Consensus         1 m~~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~------~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          1 MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEED------VAALEAEGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH------HHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6667899999999999999999999999999999997521      12222 5678899999999988776653      


Q ss_pred             --CCEEEEcccCC
Q 043777           74 --VDVRFIPSEYG   84 (231)
Q Consensus        74 --~d~~f~ps~~g   84 (231)
                        +|++++.+.++
T Consensus        75 g~id~li~~Ag~~   87 (277)
T PRK05993         75 GRLDALFNNGAYG   87 (277)
T ss_pred             CCccEEEECCCcC
Confidence              57877765443

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.91  E-value=4.6e-09  Score=98.48  Aligned_cols=74  Identities=22%  Similarity=0.223  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHH-HHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKS-LLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~-l~~al~~~d~~f~p   80 (231)
                      +|+|+|||||||||++++++|++. |++|++++|.....  .   .... .+++++.+|++|... +.++++++|++||-
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~--~---~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl  389 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI--S---RFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPL  389 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh--h---hhcCCCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence            579999999999999999999985 79999999975321  1   1112 468889999998665 67888999999985


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      +.
T Consensus       390 Aa  391 (660)
T PRK08125        390 VA  391 (660)
T ss_pred             cc
Confidence            43

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.89  E-value=1e-08  Score=85.88  Aligned_cols=81  Identities=16%  Similarity=0.221  Sum_probs=61.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      |+++++++||||+|+||++++++|+++|++|++++|+...  ..........++..+.+|++|.+++.+++++       
T Consensus         1 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~--~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          1 MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAA--RADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHH--HHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5556889999999999999999999999999999997531  1111111114577889999999998887763       


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        79 ~d~vv~~ag~   88 (277)
T PRK06180         79 IDVLVNNAGY   88 (277)
T ss_pred             CCEEEECCCc
Confidence            6888875543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.89  E-value=7.7e-09  Score=84.82  Aligned_cols=80  Identities=18%  Similarity=0.078  Sum_probs=60.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      .++++|+||||+|++|+++++.|+++|+.|++++|+..... ..+.+......+.++.+|+.|.+++.++++       .
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            34678999999999999999999999999999999753211 111111111347788999999999988876       4


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|.+++..
T Consensus        84 ~d~vi~~a   91 (251)
T PRK12826         84 LDILVANA   91 (251)
T ss_pred             CCEEEECC
Confidence            78887754

>PRK06182 short chain dehydrogenase; Validated

Probab=98.88  E-value=1.4e-08  Score=84.90  Aligned_cols=76  Identities=29%  Similarity=0.308  Sum_probs=61.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      |. +++++||||+|+||++++++|+++|++|++++|+...      ++.+. .++.++.+|++|.+++.++++       
T Consensus         1 ~~-~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~------l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          1 MQ-KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK------MEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH------HHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            44 6799999999999999999999999999999997521      12222 568889999999999988876       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      ++|++++.+..
T Consensus        74 ~id~li~~ag~   84 (273)
T PRK06182         74 RIDVLVNNAGY   84 (273)
T ss_pred             CCCEEEECCCc
Confidence            57888876544

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.88  E-value=8e-09  Score=83.92  Aligned_cols=73  Identities=27%  Similarity=0.344  Sum_probs=59.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC--CEEEEcccC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV--DVRFIPSEY   83 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~--d~~f~ps~~   83 (231)
                      |+|||||||||++++++|+++|+.|+.+.|......    ......++.++.+|+.|.+.+.+++++.  |++|+-+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~----~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSES----FEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGH----HHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccc----cccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence            799999999999999999999999999998764211    1111137889999999999999999986  998886554

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=98.87  E-value=9.2e-09  Score=93.47  Aligned_cols=77  Identities=19%  Similarity=0.146  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh------------cCCcEEEEEcCCCHHHHHHH
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF------------HSGVFDYWGLLEDEKSLLEA   70 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~------------~~~v~~~~~D~~d~~~l~~a   70 (231)
                      ++++|+||||+|+||++++++|+++|++|++++|+....  ......+            ..++.++.+|++|.+++.++
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl--~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRA--ESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            367899999999999999999999999999999975321  1111111            02477899999999999999


Q ss_pred             HccCCEEEEcc
Q 043777           71 VKQVDVRFIPS   81 (231)
Q Consensus        71 l~~~d~~f~ps   81 (231)
                      +.++|++++..
T Consensus       157 LggiDiVVn~A  167 (576)
T PLN03209        157 LGNASVVICCI  167 (576)
T ss_pred             hcCCCEEEEcc
Confidence            99999988754

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=98.87  E-value=1.3e-08  Score=87.44  Aligned_cols=77  Identities=22%  Similarity=0.195  Sum_probs=57.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc--cCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK--QVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~--~~d~~f~p   80 (231)
                      |+|+||||||+||++++++|+++|++|+++.|...... ....+.... .++.++.+|++|.+.+.++++  ++|++++.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            57999999999999999999999999999877532111 001111222 346778999999999999987  48988875


Q ss_pred             c
Q 043777           81 S   81 (231)
Q Consensus        81 s   81 (231)
                      +
T Consensus        81 a   81 (338)
T PRK10675         81 A   81 (338)
T ss_pred             C
Confidence            4

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=98.87  E-value=9.6e-09  Score=88.61  Aligned_cols=80  Identities=20%  Similarity=0.194  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhhh-h---hcCCcEEEEEcCCCHHHHHHHHcc--CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLLR-V---FHSGVFDYWGLLEDEKSLLEAVKQ--VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~~-~---~~~~v~~~~~D~~d~~~l~~al~~--~d   75 (231)
                      +|+||||||+||||++++++|+++|++|+++.|.... .. ..+.+. .   ...++.++.+|++|.+++.+++++  +|
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   85 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD   85 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999987532 10 111110 0   013578899999999999999985  59


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++.+..
T Consensus        86 ~Vih~A~~   93 (340)
T PLN02653         86 EVYNLAAQ   93 (340)
T ss_pred             EEEECCcc
Confidence            88886543

>PRK09135 pteridine reductase; Provisional

Probab=98.86  E-value=1.2e-08  Score=83.66  Aligned_cols=79  Identities=20%  Similarity=0.129  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      .++++||||+|+||++++++|+++|++|++++|+.....  ..+.+.... ..+.++.+|++|.+++.++++.       
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999998642211  011111111 3577889999999999888774       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++|+.+.
T Consensus        86 ~d~vi~~ag   94 (249)
T PRK09135         86 LDALVNNAS   94 (249)
T ss_pred             CCEEEECCC
Confidence            688887554

>PRK09186 flagellin modification protein A; Provisional

Probab=98.86  E-value=1.1e-08  Score=84.33  Aligned_cols=79  Identities=23%  Similarity=0.167  Sum_probs=59.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHcc--
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQ--   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~--   73 (231)
                      |.++++++||||+|+||+++++.|+++|++|+++.|+....  .+....+    . ..+.++.+|++|++++.+++++  
T Consensus         1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (256)
T PRK09186          1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL--NELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSA   78 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH--HHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHH
Confidence            56678999999999999999999999999999998875321  1111111    2 3456679999999999888775  


Q ss_pred             -----CCEEEEcc
Q 043777           74 -----VDVRFIPS   81 (231)
Q Consensus        74 -----~d~~f~ps   81 (231)
                           +|++++..
T Consensus        79 ~~~~~id~vi~~A   91 (256)
T PRK09186         79 EKYGKIDGAVNCA   91 (256)
T ss_pred             HHcCCccEEEECC
Confidence                 68777643

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=98.86  E-value=1.2e-08  Score=88.43  Aligned_cols=78  Identities=15%  Similarity=0.089  Sum_probs=56.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-c-CCcEEEEEcCCCHHHHHHHHcc--CCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-H-SGVFDYWGLLEDEKSLLEAVKQ--VDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~~--~d~~f~p   80 (231)
                      ++|+|||||||||++++++|+++|++++++.++.........+... . ..+.++.+|++|.+++.+++++  +|.+++.
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~   81 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL   81 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence            5899999999999999999999998866554432111100001111 1 3567889999999999999985  8998886


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      +.
T Consensus        82 A~   83 (355)
T PRK10217         82 AA   83 (355)
T ss_pred             Cc
Confidence            54

>PRK07806 short chain dehydrogenase; Provisional

Probab=98.86  E-value=1.9e-08  Score=82.61  Aligned_cols=78  Identities=17%  Similarity=0.109  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      .++++||||+|+||++++++|+++|++|+++.|+.....  ..+.++.....+.++.+|++|++++.++++       ++
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL   85 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999999999998653211  011111112356788999999999887776       37


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |++++..
T Consensus        86 d~vi~~a   92 (248)
T PRK07806         86 DALVLNA   92 (248)
T ss_pred             cEEEECC
Confidence            8777654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.86  E-value=2.5e-08  Score=85.91  Aligned_cols=123  Identities=19%  Similarity=0.121  Sum_probs=79.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      |+++.+++||||+||+|++++++|++++  .++++++....... ..+........++.+.+|++|...+.++++++ .+
T Consensus         1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~V   79 (361)
T KOG1430|consen    1 MEKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VV   79 (361)
T ss_pred             CCcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eE
Confidence            6667899999999999999999999998  77888887654222 11111111367889999999999999999999 54


Q ss_pred             EEcccCCCcceee--------chhHHHHHHHhhcCccccCceEEEeeeeeeeeec
Q 043777           78 FIPSEYGAGVFVK--------DTDVAAFTINALDDPRTLNKLLHLREISHTFNME  124 (231)
Q Consensus        78 f~ps~~g~~~~~~--------~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (231)
                      ++....+...+..        .+-.++..+.........++.+|+++....|..+
T Consensus        80 vh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~  134 (361)
T KOG1430|consen   80 VHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGE  134 (361)
T ss_pred             EEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCe
Confidence            4433333222221        1222222222222233567788888666665443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.85  E-value=1.5e-08  Score=83.72  Aligned_cols=76  Identities=21%  Similarity=0.254  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCC-HHHHHHHH-ccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLED-EKSLLEAV-KQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~l~~al-~~~d~~f~ps   81 (231)
                      +|+|+||||||++|+.++++|+++|++|+++.|+.+..  .+.... ..++.++.+|++| .+.+.+.+ .++|++|+..
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~   93 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKA--KTSLPQ-DPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT   93 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHH--HHhccc-CCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence            57899999999999999999999999999999975310  111111 1468899999998 57788888 6899988754


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        94 g   94 (251)
T PLN00141         94 G   94 (251)
T ss_pred             C
Confidence            3

>PLN02240 UDP-glucose 4-epimerase

Probab=98.85  E-value=1.7e-08  Score=87.34  Aligned_cols=80  Identities=16%  Similarity=0.100  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh----hcCCcEEEEEcCCCHHHHHHHHc--cCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV----FHSGVFDYWGLLEDEKSLLEAVK--QVD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~----~~~~v~~~~~D~~d~~~l~~al~--~~d   75 (231)
                      ++++|+||||||++|++++++|+++|++|++++|...... .......    ...++.++.+|++|.+.+.++++  ++|
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d   83 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD   83 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence            3579999999999999999999999999999987542211 0011111    11357889999999999999887  578


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      .+++...
T Consensus        84 ~vih~a~   90 (352)
T PLN02240         84 AVIHFAG   90 (352)
T ss_pred             EEEEccc
Confidence            8887543

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.85  E-value=1.2e-08  Score=85.30  Aligned_cols=77  Identities=18%  Similarity=0.207  Sum_probs=59.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~~   77 (231)
                      ++++||||+|+||++++++|+++|+.|.++.|+...  ..........++.++.+|++|.+++.+++++       +|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDA--LDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999987421  1111112224678899999999998877653       7988


Q ss_pred             EEcccC
Q 043777           78 FIPSEY   83 (231)
Q Consensus        78 f~ps~~   83 (231)
                      ++.+..
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            886543

>PRK09291 short chain dehydrogenase; Provisional

Probab=98.85  E-value=1.5e-08  Score=83.62  Aligned_cols=80  Identities=18%  Similarity=0.029  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-cCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-QVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-~~d~~f~ps   81 (231)
                      +++++||||||+||+++++.|+++|++|++++|+..... ..+.......++.++.+|++|.+++.+++. ++|++++.+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            368999999999999999999999999999999742100 001111112457888999999999999887 699998865


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      .+
T Consensus        82 g~   83 (257)
T PRK09291         82 GI   83 (257)
T ss_pred             Cc
Confidence            44

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.85  E-value=1.2e-08  Score=83.28  Aligned_cols=79  Identities=16%  Similarity=0.060  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++|+||||+|++|+++++.|+++|++|.++.|+..... ....+......+.++.+|++|++++.+++++       +|
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD   84 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            478999999999999999999999999999999753211 0111111124567888999999998887765       48


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      .+++...
T Consensus        85 ~vi~~ag   91 (246)
T PRK05653         85 ILVNNAG   91 (246)
T ss_pred             EEEECCC
Confidence            7777543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.84  E-value=2.1e-08  Score=82.46  Aligned_cols=34  Identities=32%  Similarity=0.453  Sum_probs=31.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS   40 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~   40 (231)
                      |+||||||+||++|+..|.+.||+|++++|+...
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~   34 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPK   34 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcc
Confidence            6899999999999999999999999999998754

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.84  E-value=1.2e-07  Score=81.79  Aligned_cols=74  Identities=20%  Similarity=0.231  Sum_probs=52.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhh---hhhh-------c-CCcEEEEEcCCCH------H
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSL---LRVF-------H-SGVFDYWGLLEDE------K   65 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~---~~~~-------~-~~v~~~~~D~~d~------~   65 (231)
                      +|+|||||||+|++++++|+++|  +.|+++.|+.+... ....   ++..       . .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  56999999764211 0011   1111       1 3678899998753      4


Q ss_pred             HHHHHHccCCEEEE
Q 043777           66 SLLEAVKQVDVRFI   79 (231)
Q Consensus        66 ~l~~al~~~d~~f~   79 (231)
                      .+..+.+++|++++
T Consensus        81 ~~~~~~~~~d~vih   94 (367)
T TIGR01746        81 EWERLAENVDTIVH   94 (367)
T ss_pred             HHHHHHhhCCEEEe
Confidence            56677777888765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK06194 hypothetical protein; Provisional

Probab=98.84  E-value=1.7e-08  Score=84.86  Aligned_cols=78  Identities=13%  Similarity=0.101  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      ++++|||||+|+||++++++|+++|+.|++++|+...  ..+....+.   ..+.++.+|++|.+++.+++++       
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA--LDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999986432  111112221   3466789999999999888774       


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            6988886544

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.83  E-value=7.9e-09  Score=87.32  Aligned_cols=34  Identities=29%  Similarity=0.377  Sum_probs=31.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |||||+||+|++|++|++.|.+.|++|..+.|..
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~   34 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRSD   34 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh
Confidence            7899999999999999999999999999987764

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.82  E-value=2e-08  Score=83.03  Aligned_cols=79  Identities=11%  Similarity=0.038  Sum_probs=58.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+..... ..+.+......+.++++|++|.+++.+++++       +|
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   86 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD   86 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999763211 1111111123466789999999998887764       78


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        87 ~vi~~ag   93 (262)
T PRK13394         87 ILVSNAG   93 (262)
T ss_pred             EEEECCc
Confidence            8777543

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.82  E-value=5.4e-08  Score=80.27  Aligned_cols=60  Identities=18%  Similarity=0.163  Sum_probs=42.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDE   64 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~   64 (231)
                      +++|+||||+||||+||++.|..+||.|++++...... +......+. ...+.+.-|+..+
T Consensus        27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~-k~n~~~~~~~~~fel~~hdv~~p   87 (350)
T KOG1429|consen   27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR-KENLEHWIGHPNFELIRHDVVEP   87 (350)
T ss_pred             CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc-hhhcchhccCcceeEEEeechhH
Confidence            57999999999999999999999999999988654321 111111122 5566666676554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.81  E-value=3e-08  Score=80.99  Aligned_cols=79  Identities=22%  Similarity=0.166  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      ++++++||||||++|+++++.|+++|++|+++.|+..... ......+   ...+.++.+|++|.+++.++++       
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGA-EALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3579999999999999999999999999988888653211 1111122   2456778899999999887766       


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      ++|.+++...
T Consensus        83 ~id~vi~~ag   92 (248)
T PRK05557         83 GVDILVNNAG   92 (248)
T ss_pred             CCCEEEECCC
Confidence            4688777543

>PRK08219 short chain dehydrogenase; Provisional

Probab=98.80  E-value=2.3e-08  Score=80.84  Aligned_cols=74  Identities=23%  Similarity=0.214  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p   80 (231)
                      +|+++||||+|++|+++++.|+++ ++|+++.|+...   .+.+.....++.++.+|++|.+++.++++.   +|.+++.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAER---LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHH---HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            578999999999999999999999 999999997421   111111114678899999999999998874   7888775


Q ss_pred             c
Q 043777           81 S   81 (231)
Q Consensus        81 s   81 (231)
                      .
T Consensus        79 a   79 (227)
T PRK08219         79 A   79 (227)
T ss_pred             C
Confidence            4

>PRK12320 hypothetical protein; Provisional

Probab=98.79  E-value=1.9e-08  Score=93.79  Aligned_cols=69  Identities=22%  Similarity=0.244  Sum_probs=57.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      |+|+||||+||||++++++|+++|++|++++|....        ....+++++.+|++|.. +.++++++|++|+-..
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~--------~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa   69 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD--------ALDPRVDYVCASLRNPV-LQELAGEADAVIHLAP   69 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh--------cccCCceEEEccCCCHH-HHHHhcCCCEEEEcCc
Confidence            589999999999999999999999999999986421        01146789999999985 7888899999988654

>PRK07454 short chain dehydrogenase; Provisional

Probab=98.79  E-value=2.5e-08  Score=81.62  Aligned_cols=78  Identities=15%  Similarity=0.091  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      ++++++||||+|++|+.++++|+++|+.|++++|+....  .+.....   ..++.++.+|++|.+++.++++.      
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL--EALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999975321  1111111   24577889999999988877763      


Q ss_pred             -CCEEEEccc
Q 043777           74 -VDVRFIPSE   82 (231)
Q Consensus        74 -~d~~f~ps~   82 (231)
                       +|++++...
T Consensus        83 ~id~lv~~ag   92 (241)
T PRK07454         83 CPDVLINNAG   92 (241)
T ss_pred             CCCEEEECCC
Confidence             788877543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.79  E-value=2e-08  Score=81.96  Aligned_cols=79  Identities=16%  Similarity=0.120  Sum_probs=58.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++|+||||||++|+++++.|+++|++|+++.|......  ..+.......++.++.+|+.|.+++.+++++       +
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   85 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999988777653211  0111111224578899999999998887753       5


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        86 d~vi~~ag   93 (249)
T PRK12825         86 DILVNNAG   93 (249)
T ss_pred             CEEEECCc
Confidence            88777543

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.79  E-value=2e-08  Score=85.08  Aligned_cols=72  Identities=29%  Similarity=0.202  Sum_probs=59.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC-CEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV-DVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~-d~~f~ps~   82 (231)
                      |+|||||||||||++++++|+++|++|++++|......      ....++.++.+|++|.+.+.++++++ |++++...
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa   73 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD------PLLSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA   73 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc------ccccccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence            35999999999999999999999999999999764211      00046788999999999999999988 99888544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.78  E-value=2.6e-08  Score=81.95  Aligned_cols=79  Identities=13%  Similarity=0.091  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--------
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--------   73 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--------   73 (231)
                      .++++++||||+|+||+++++.|+++|++|.+..|+... ........+..++.++.+|++|++++.++++.        
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSED-AAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHH-HHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            345799999999999999999999999999877664321 11111122224677889999999998887764        


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|++++..
T Consensus        82 id~li~~a   89 (253)
T PRK08642         82 ITTVVNNA   89 (253)
T ss_pred             CeEEEECC
Confidence            78887754

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.77  E-value=1.6e-08  Score=85.97  Aligned_cols=62  Identities=27%  Similarity=0.451  Sum_probs=51.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps~   82 (231)
                      |+||||||+||||++++++|+++| +|+++.|...                .+.+|++|.+.+.+++++  +|+++|-..
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa   63 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA   63 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence            589999999999999999999999 7888877531                235799999999999984  799998654


Q ss_pred             C
Q 043777           83 Y   83 (231)
Q Consensus        83 ~   83 (231)
                      .
T Consensus        64 ~   64 (299)
T PRK09987         64 H   64 (299)
T ss_pred             c
Confidence            3

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=98.77  E-value=4.8e-08  Score=84.53  Aligned_cols=78  Identities=17%  Similarity=0.072  Sum_probs=55.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~f~   79 (231)
                      |+|+|||||||||++++++|+++|+. |+++.|...... ......+.  ..+.++.+|++|.+++.+++++  +|++++
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN-LESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch-HHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            58999999999999999999999976 444444321110 11111111  3467889999999999999975  799888


Q ss_pred             cccC
Q 043777           80 PSEY   83 (231)
Q Consensus        80 ps~~   83 (231)
                      .+..
T Consensus        80 ~A~~   83 (352)
T PRK10084         80 LAAE   83 (352)
T ss_pred             CCcc
Confidence            6543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.76  E-value=3.9e-08  Score=88.14  Aligned_cols=82  Identities=23%  Similarity=0.335  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCc-h-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc--CCE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASN-F-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ--VDV   76 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~-~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~--~d~   76 (231)
                      .+|+|+||||+|.||+.+|+++++.+ ..+++++|+.... . ..++...++ ....++-||+.|.+.+.+++++  +|+
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence            47899999999999999999999987 4678888876431 1 122222233 5677888999999999999999  999


Q ss_pred             EEEcccCC
Q 043777           77 RFIPSEYG   84 (231)
Q Consensus        77 ~f~ps~~g   84 (231)
                      +||.+.+.
T Consensus       329 VfHAAA~K  336 (588)
T COG1086         329 VFHAAALK  336 (588)
T ss_pred             EEEhhhhc
Confidence            99976554

>PRK07814 short chain dehydrogenase; Provisional

Probab=98.76  E-value=4.2e-08  Score=81.54  Aligned_cols=77  Identities=12%  Similarity=0.009  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|++++|+...  ..+....+   ..++.++.+|+++++++.++++       .
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQ--LDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997532  11111122   2457788999999999887765       4


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        88 id~vi~~Ag   96 (263)
T PRK07814         88 LDIVVNNVG   96 (263)
T ss_pred             CCEEEECCC
Confidence            688887654

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.76  E-value=4.9e-08  Score=79.36  Aligned_cols=77  Identities=17%  Similarity=0.022  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||+++++.|+++|+.|++++|+....  .+....+. .++.++.+|+.|.+++.++++       ++|
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL--SQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH--HHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence            57999999999999999999999999999999975321  11222233 567788999999999887776       468


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        85 ~vi~~ag   91 (239)
T PRK12828         85 ALVNIAG   91 (239)
T ss_pred             EEEECCc
Confidence            8877543

>PRK07102 short chain dehydrogenase; Provisional

Probab=98.76  E-value=2.6e-08  Score=81.68  Aligned_cols=78  Identities=22%  Similarity=0.124  Sum_probs=58.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc----CCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ----VDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~----~d~~f   78 (231)
                      |+++||||+|+||++++++|+++|++|++++|+..... ..+.+.... .++.++++|++|.+++.+++++    +|.++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            58999999999999999999999999999999753211 011111111 4678899999999998887765    57777


Q ss_pred             Eccc
Q 043777           79 IPSE   82 (231)
Q Consensus        79 ~ps~   82 (231)
                      +...
T Consensus        82 ~~ag   85 (243)
T PRK07102         82 IAVG   85 (243)
T ss_pred             ECCc
Confidence            6543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.75  E-value=4.2e-08  Score=80.14  Aligned_cols=79  Identities=16%  Similarity=0.078  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+.....++.++.+|+++++++.++++       .+|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            468999999999999999999999999999999753210 011111112457788999999999988886       578


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        87 ~vi~~ag   93 (239)
T PRK07666         87 ILINNAG   93 (239)
T ss_pred             EEEEcCc
Confidence            8887543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.75  E-value=6.7e-08  Score=79.67  Aligned_cols=78  Identities=14%  Similarity=0.078  Sum_probs=58.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|++++|...... .+....+   ..++.++.+|++|++++.++++       .
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEEL-AATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHH-HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            378999999999999999999999999999988643211 1111222   2457788999999998877665       3


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        81 id~vi~~ag   89 (256)
T PRK12745         81 IDCLVNNAG   89 (256)
T ss_pred             CCEEEECCc
Confidence            688877543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=98.75  E-value=5.1e-08  Score=80.30  Aligned_cols=76  Identities=24%  Similarity=0.202  Sum_probs=58.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~~   77 (231)
                      |+++||||+|+||+++++.|+++|++|.+++|+...  ..........++.++.+|++|.+++.++++       ++|.+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER--LQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            579999999999999999999999999999997521  111111222467788999999999887765       57888


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      ++.+.
T Consensus        79 i~~ag   83 (248)
T PRK10538         79 VNNAG   83 (248)
T ss_pred             EECCC
Confidence            77554

>PRK08267 short chain dehydrogenase; Provisional

Probab=98.73  E-value=5.3e-08  Score=80.64  Aligned_cols=76  Identities=17%  Similarity=0.069  Sum_probs=58.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc--------CC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ--------VD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~--------~d   75 (231)
                      ++++||||+|+||++++++|+++|+.|.+++|+...  ..+...... ..+.++.+|++|.+++.+++++        +|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAG--LAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            589999999999999999999999999999987531  111112222 4678899999999998877663        48


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        80 ~vi~~ag   86 (260)
T PRK08267         80 VLFNNAG   86 (260)
T ss_pred             EEEECCC
Confidence            8777543

>PRK12829 short chain dehydrogenase; Provisional

Probab=98.73  E-value=5.8e-08  Score=80.33  Aligned_cols=78  Identities=17%  Similarity=0.063  Sum_probs=59.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +.++++||||+|+||+++++.|+++|++|+++.|+....  .+...... ..+.++.+|++|++++.++++       ++
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL--AATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            358999999999999999999999999999999975321  11111222 245788999999999887775       47


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |.+++...
T Consensus        88 d~vi~~ag   95 (264)
T PRK12829         88 DVLVNNAG   95 (264)
T ss_pred             CEEEECCC
Confidence            88887543

>PRK05866 short chain dehydrogenase; Provisional

Probab=98.73  E-value=5.7e-08  Score=82.31  Aligned_cols=77  Identities=17%  Similarity=0.091  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|.+++|+...  ..+..+.+   ...+.++.+|++|.+++.++++       .
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~--l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDL--LDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997521  11111122   2346688999999999888887       5


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus       118 id~li~~AG  126 (293)
T PRK05866        118 VDILINNAG  126 (293)
T ss_pred             CCEEEECCC
Confidence            788887544

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.73  E-value=4.1e-08  Score=80.65  Aligned_cols=79  Identities=18%  Similarity=0.100  Sum_probs=56.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      ++++++||||+|+||+++++.|+++|++|+++ .|+..... ..+.++....++.++.+|++|++++.+++++       
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            36799999999999999999999999998764 55532100 0111111124577889999999998887764       


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|++++..
T Consensus        83 id~vi~~a   90 (250)
T PRK08063         83 LDVFVNNA   90 (250)
T ss_pred             CCEEEECC
Confidence            68887754

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.73  E-value=6.1e-08  Score=78.98  Aligned_cols=77  Identities=18%  Similarity=0.183  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|++|++++++|+++|++|+++.|+...  ..+..+.+.  .++.++.+|++|.+++.++++       .+
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKE--LEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHH--HHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999997532  111222222  467789999999999888776       57


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        84 d~vi~~ag   91 (237)
T PRK07326         84 DVLIANAG   91 (237)
T ss_pred             CEEEECCC
Confidence            88887643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.73  E-value=5.4e-08  Score=80.55  Aligned_cols=75  Identities=19%  Similarity=0.127  Sum_probs=57.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...   .+....+   ...+.++.+|++|.+++.++++       .
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV---HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH---HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999986421   1111222   2346678999999988877665       3


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|++++..
T Consensus        85 id~lv~nA   92 (260)
T PRK12823         85 IDVLINNV   92 (260)
T ss_pred             CeEEEECC
Confidence            68877754

>PRK06138 short chain dehydrogenase; Provisional

Probab=98.73  E-value=5.9e-08  Score=79.72  Aligned_cols=78  Identities=17%  Similarity=0.124  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      ++++++||||+|+||++++++|+++|++|.++.|+....  .+.....  ...+.++.+|++|++++.++++       .
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA--ERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH--HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            367899999999999999999999999999999875321  1111112  2456788999999999988776       4


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++...
T Consensus        82 id~vi~~ag   90 (252)
T PRK06138         82 LDVLVNNAG   90 (252)
T ss_pred             CCEEEECCC
Confidence            788887544

>PRK05693 short chain dehydrogenase; Provisional

Probab=98.72  E-value=6.2e-08  Score=80.95  Aligned_cols=74  Identities=20%  Similarity=0.238  Sum_probs=58.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      |+++||||+|+||+++++.|+++|++|++++|+...   .   .... .++..+.+|++|.+++.++++       .+|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~---~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAED---V---EALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH---H---HHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            589999999999999999999999999999987421   1   1222 467788999999998877764       4688


Q ss_pred             EEEcccCC
Q 043777           77 RFIPSEYG   84 (231)
Q Consensus        77 ~f~ps~~g   84 (231)
                      +++.+.++
T Consensus        76 vi~~ag~~   83 (274)
T PRK05693         76 LINNAGYG   83 (274)
T ss_pred             EEECCCCC
Confidence            88866543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.72  E-value=4.2e-08  Score=80.48  Aligned_cols=77  Identities=19%  Similarity=0.140  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+....  ......+.  ..+.++.+|+.|.+++.+++++       +
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA--ERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999985321  11112222  3467889999999999887764       5


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++.+.
T Consensus        83 d~vi~~ag   90 (251)
T PRK07231         83 DILVNNAG   90 (251)
T ss_pred             CEEEECCC
Confidence            88877544

>PRK07890 short chain dehydrogenase; Provisional

Probab=98.72  E-value=3.8e-08  Score=81.26  Aligned_cols=77  Identities=16%  Similarity=0.058  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|+.|.+++|+...  ..+....+   ...+..+.+|++|.+++..+++       .
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER--LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999987532  11111222   2456789999999999877665       3


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        83 ~d~vi~~ag   91 (258)
T PRK07890         83 VDALVNNAF   91 (258)
T ss_pred             ccEEEECCc
Confidence            688777543

>PRK09134 short chain dehydrogenase; Provisional

Probab=98.72  E-value=6.8e-08  Score=79.96  Aligned_cols=79  Identities=18%  Similarity=0.117  Sum_probs=58.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      ++|+++||||+|+||++++++|++.|++|+++.|..... .......+   ...+.++.+|++|.+++.+++++      
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE-AEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999998877753211 11111122   24577889999999998887764      


Q ss_pred             -CCEEEEccc
Q 043777           74 -VDVRFIPSE   82 (231)
Q Consensus        74 -~d~~f~ps~   82 (231)
                       +|++++...
T Consensus        87 ~iD~vi~~ag   96 (258)
T PRK09134         87 PITLLVNNAS   96 (258)
T ss_pred             CCCEEEECCc
Confidence             688877543

>PRK08265 short chain dehydrogenase; Provisional

Probab=98.72  E-value=5.6e-08  Score=80.73  Aligned_cols=76  Identities=16%  Similarity=0.097  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+...+.++.+|++|.+++.++++.       +|+
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN--GAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5799999999999999999999999999999997531  1111222234577889999999998877764       587


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      +++..
T Consensus        84 lv~~a   88 (261)
T PRK08265         84 LVNLA   88 (261)
T ss_pred             EEECC
Confidence            77644

>PRK06101 short chain dehydrogenase; Provisional

Probab=98.72  E-value=4.2e-08  Score=80.42  Aligned_cols=67  Identities=21%  Similarity=0.232  Sum_probs=53.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      ++++||||+|+||++++++|+++|++|.+++|+...   .+.+.....++.++.+|++|.+++.++++++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   68 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV---LDELHTQSANIFTLAFDVTDHPGTKAALSQL   68 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH---HHHHHHhcCCCeEEEeeCCCHHHHHHHHHhc
Confidence            589999999999999999999999999999997421   1111111245788999999999999998874

>PRK06172 short chain dehydrogenase; Provisional

Probab=98.72  E-value=5.3e-08  Score=80.27  Aligned_cols=79  Identities=19%  Similarity=0.120  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      .++++||||+|+||++++++|+++|++|.++.|+..... ..+.+......+..+.+|++|.+++.++++.       +|
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   86 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLD   86 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            479999999999999999999999999999999753211 1111122224577889999999998887764       48


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++.+.
T Consensus        87 ~li~~ag   93 (253)
T PRK06172         87 YAFNNAG   93 (253)
T ss_pred             EEEECCC
Confidence            8777544

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=98.72  E-value=6.2e-08  Score=79.50  Aligned_cols=79  Identities=22%  Similarity=0.126  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||++++++|++.|++|.++.|+..... ..+.+......+.++.+|++|.+++.++++       .+|
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d   82 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            579999999999999999999999999999988753210 001111112457889999999999888776       378


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        83 ~vi~~ag   89 (250)
T TIGR03206        83 VLVNNAG   89 (250)
T ss_pred             EEEECCC
Confidence            7777554

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12937 short chain dehydrogenase; Provisional

Probab=98.72  E-value=7.7e-08  Score=78.71  Aligned_cols=80  Identities=16%  Similarity=0.116  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +.++++||||+|+||+++++.|+++|+.++++.|+.....  ..+.+......+.++.+|++|.+++.++++       +
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4589999999999999999999999999888777542111  011111222457788999999999988877       4


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        84 id~vi~~ag   92 (245)
T PRK12937         84 IDVLVNNAG   92 (245)
T ss_pred             CCEEEECCC
Confidence            788887654

>PRK08628 short chain dehydrogenase; Provisional

Probab=98.71  E-value=8.7e-08  Score=79.21  Aligned_cols=76  Identities=18%  Similarity=0.116  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|+.|++++|+...   .+..+.+   ...+.++.+|+++.+++.++++       .
T Consensus         7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD---DEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhh---HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999987642   1122222   2457789999999999988776       3


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++.+.
T Consensus        84 id~vi~~ag   92 (258)
T PRK08628         84 IDGLVNNAG   92 (258)
T ss_pred             CCEEEECCc
Confidence            688877654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.71  E-value=1.7e-07  Score=75.99  Aligned_cols=67  Identities=18%  Similarity=0.108  Sum_probs=52.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~   72 (231)
                      +|.++|||||++||.+++++|.++|++|++..|+...  ..++..++. ..+..+..|++|.+++..+++
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~dr--L~~la~~~~~~~~~~~~~DVtD~~~~~~~i~   73 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARREER--LEALADEIGAGAALALALDVTDRAAVEAAIE   73 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHH--HHHHHHhhccCceEEEeeccCCHHHHHHHHH
Confidence            5679999999999999999999999999999998632  122223333 357788999999998766665

>PRK08643 acetoin reductase; Validated

Probab=98.71  E-value=7.7e-08  Score=79.43  Aligned_cols=78  Identities=17%  Similarity=0.184  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|+++.|+....  .+....+   ..++.++.+|++|++++.++++       +
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA--QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999875321  1111122   1456778999999998877776       3


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++.+..
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            6888876543

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.71  E-value=8.3e-08  Score=78.81  Aligned_cols=78  Identities=13%  Similarity=0.084  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      .++++||||+|+||++++++|+++|++|+++.|+....  ....+.+   ...+..+.+|++|.+++.++++       .
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA--ERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999975321  1111222   1356778999999998877665       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        84 id~vi~~ag~   93 (250)
T PRK07774         84 IDYLVNNAAI   93 (250)
T ss_pred             CCEEEECCCC
Confidence            7888885543

>PRK08263 short chain dehydrogenase; Provisional

Probab=98.71  E-value=4.7e-08  Score=81.77  Aligned_cols=79  Identities=20%  Similarity=0.253  Sum_probs=59.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      |+ +++|+||||+|+||++++++|+++|+.|++++|+...  ...........+..+.+|++|.+++.++++.       
T Consensus         1 ~~-~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (275)
T PRK08263          1 MM-EKVWFITGASRGFGRAWTEAALERGDRVVATARDTAT--LADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGR   77 (275)
T ss_pred             CC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            54 5789999999999999999999999999999987531  1111112224577889999999998777653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++...
T Consensus        78 ~d~vi~~ag   86 (275)
T PRK08263         78 LDIVVNNAG   86 (275)
T ss_pred             CCEEEECCC
Confidence            688777543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.71  E-value=2.4e-07  Score=76.56  Aligned_cols=69  Identities=25%  Similarity=0.229  Sum_probs=54.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      .+-|.|||||+|+.++.+|.+.|-+|++-.|.....+  ..++-..  ..+-+...|+.|++++.++++...+
T Consensus        63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~--r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNV  133 (391)
T KOG2865|consen   63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP--RHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNV  133 (391)
T ss_pred             EEEEecccccccHHHHHHHhhcCCeEEEeccCCccch--hheeecccccceeeeccCCCCHHHHHHHHHhCcE
Confidence            4568899999999999999999999999999653322  1122222  4566788999999999999998766

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.71  E-value=3.9e-07  Score=76.40  Aligned_cols=34  Identities=32%  Similarity=0.508  Sum_probs=31.4

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS   40 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~   40 (231)
                      |+|||||||||+++++.|+++|++|++++|+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   34 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA   34 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence            6899999999999999999999999999997643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK05717 oxidoreductase; Validated

Probab=98.71  E-value=6.3e-08  Score=80.02  Aligned_cols=78  Identities=17%  Similarity=0.112  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||+++++.|+++|++|.+++|+...  ..+..+.+...+.++.+|++|.+++.++++.       +|+
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRER--GSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999999999999998876421  1111122224577889999999988665543       688


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            8876543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=98.70  E-value=6.6e-08  Score=79.83  Aligned_cols=78  Identities=17%  Similarity=0.146  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+....+.   ..+..+.+|++|.+++.+++++       
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAK--LAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999987532  111222222   2367789999999998888764       


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        88 ~d~li~~ag~   97 (255)
T PRK07523         88 IDILVNNAGM   97 (255)
T ss_pred             CCEEEECCCC
Confidence            6787775543

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.70  E-value=5.4e-08  Score=81.49  Aligned_cols=79  Identities=18%  Similarity=0.124  Sum_probs=57.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ----   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~----   73 (231)
                      |. +++++||||+|++|+++++.|+++|+.|++++|+..... ..+......  ..+.++.+|++|++++.+ +++    
T Consensus         1 ~~-~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~   78 (280)
T PRK06914          1 MN-KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE   78 (280)
T ss_pred             CC-CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh
Confidence            55 578999999999999999999999999999998753211 011111111  357788999999998876 433    


Q ss_pred             ---CCEEEEcc
Q 043777           74 ---VDVRFIPS   81 (231)
Q Consensus        74 ---~d~~f~ps   81 (231)
                         +|.+++..
T Consensus        79 ~~~id~vv~~a   89 (280)
T PRK06914         79 IGRIDLLVNNA   89 (280)
T ss_pred             cCCeeEEEECC
Confidence               57777654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.70  E-value=7.4e-08  Score=78.76  Aligned_cols=78  Identities=15%  Similarity=0.137  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||+++++.|++.|++|+++ .|+....  ......+   ...+.++.+|++|.+++.++++       
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA--QELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999888 7764321  1111111   1357788999999999888776       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      .+|++++....
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            58888875543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.69  E-value=5.5e-08  Score=79.97  Aligned_cols=75  Identities=16%  Similarity=0.118  Sum_probs=56.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      ++++||||+|+||+++++.|+++|++|++++|+....  .+....+   ...+.++.+|+.|.+++.++++       ++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGA--EAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999999999999975321  1111111   2457788999999997765554       46


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |.+++..
T Consensus        80 d~vi~~a   86 (255)
T TIGR01963        80 DILVNNA   86 (255)
T ss_pred             CEEEECC
Confidence            8877754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.69  E-value=8.3e-08  Score=79.28  Aligned_cols=77  Identities=30%  Similarity=0.303  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||+++++.|+++|++|++++|+...  .....+.+. .++.++.+|++|.+++.+++.+       +|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAA--LAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999999999987532  111122222 4577889999999999887764       68


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      .+++...
T Consensus        80 ~vi~~ag   86 (257)
T PRK07074         80 VLVANAG   86 (257)
T ss_pred             EEEECCC
Confidence            8777544

>PRK08251 short chain dehydrogenase; Provisional

Probab=98.69  E-value=9e-08  Score=78.58  Aligned_cols=80  Identities=15%  Similarity=0.100  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|.+++|+..... ..+.+.. .. ..+.++.+|++|.+++.++++       .
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999753211 0111111 11 356778999999998877665       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        82 id~vi~~ag~   91 (248)
T PRK08251         82 LDRVIVNAGI   91 (248)
T ss_pred             CCEEEECCCc
Confidence            7888876543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=98.69  E-value=6.3e-08  Score=82.96  Aligned_cols=77  Identities=16%  Similarity=0.096  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+.   ..+.++.+|++|.+++.++++.       
T Consensus         6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKK--AEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            6789999999999999999999999999999987532  111112221   3577889999999998887764       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        84 iD~li~nAg   92 (322)
T PRK07453         84 LDALVCNAA   92 (322)
T ss_pred             ccEEEECCc
Confidence            788777544

>PLN02253 xanthoxin dehydrogenase

Probab=98.68  E-value=1.2e-07  Score=79.53  Aligned_cols=77  Identities=16%  Similarity=0.088  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+.  .++.++++|++|.+++.++++       .+
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDL--GQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999886421  111122222  357789999999999988876       47


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        96 d~li~~Ag  103 (280)
T PLN02253         96 DIMVNNAG  103 (280)
T ss_pred             CEEEECCC
Confidence            88877543

>PRK06924 short chain dehydrogenase; Provisional

Probab=98.68  E-value=5.1e-08  Score=80.21  Aligned_cols=69  Identities=16%  Similarity=0.179  Sum_probs=53.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      ++++||||+|+||++++++|+++|++|.+++|+.... ..+..+....++.++.+|++|.+++.++++.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   70 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE-LTKLAEQYNSNLTFHSLDLQDVHELETNFNEI   70 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH-HHHHHhccCCceEEEEecCCCHHHHHHHHHHH
Confidence            5899999999999999999999999999999875211 11111111246778999999999998887653

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.68  E-value=8.1e-08  Score=80.24  Aligned_cols=79  Identities=15%  Similarity=0.074  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|.++.|+..... ..+.+....  ..+.++.+|++|++++.++++       .
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999999998753210 011111111  356778899999999888776       4


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        87 ~d~li~~ag   95 (276)
T PRK05875         87 LHGVVHCAG   95 (276)
T ss_pred             CCEEEECCC
Confidence            788887543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.68  E-value=1.6e-07  Score=77.63  Aligned_cols=74  Identities=16%  Similarity=0.178  Sum_probs=57.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||++++++|.+.|++|.++.|+...     ..+.+. .++.++.+|++|++++.++++.       +|
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~-----~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN-----EAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD   81 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH-----HHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999887765421     112222 4678899999999998887763       68


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      .+++...
T Consensus        82 ~li~~ag   88 (255)
T PRK06463         82 VLVNNAG   88 (255)
T ss_pred             EEEECCC
Confidence            8776543

>PRK07024 short chain dehydrogenase; Provisional

Probab=98.68  E-value=1.1e-07  Score=78.71  Aligned_cols=77  Identities=19%  Similarity=0.179  Sum_probs=58.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||+|+||+++++.|+++|++|++++|+...  ..+..+.+.  ..+.++.+|++|.+++.++++.       +
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDA--LQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            3789999999999999999999999999999987421  111112222  2577889999999999887764       6


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++.+.
T Consensus        80 d~lv~~ag   87 (257)
T PRK07024         80 DVVIANAG   87 (257)
T ss_pred             CEEEECCC
Confidence            88877554

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.68  E-value=1.3e-07  Score=78.35  Aligned_cols=79  Identities=14%  Similarity=0.037  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|++.|+.|.++.|+.......+.+......+.++.+|+++.+++.++++       .+|.
T Consensus        15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   94 (258)
T PRK06935         15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI   94 (258)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999998731111111122222457789999999999888776       4688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      .++...
T Consensus        95 li~~ag  100 (258)
T PRK06935         95 LVNNAG  100 (258)
T ss_pred             EEECCC
Confidence            777543

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.67  E-value=1e-07  Score=78.57  Aligned_cols=77  Identities=18%  Similarity=0.104  Sum_probs=56.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||+++++.|+++|+.|.++ .|+..  +..+....+.   ..+.++.+|++|.+++.++++       
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQ--AADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH--HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999998775 45431  1111112221   356788999999999988776       


Q ss_pred             ------cCCEEEEccc
Q 043777           73 ------QVDVRFIPSE   82 (231)
Q Consensus        73 ------~~d~~f~ps~   82 (231)
                            ++|++++...
T Consensus        84 ~~~~~~~id~vi~~ag   99 (254)
T PRK12746         84 IRVGTSEIDILVNNAG   99 (254)
T ss_pred             cccCCCCccEEEECCC
Confidence                  3788777543

>PRK07023 short chain dehydrogenase; Provisional

Probab=98.67  E-value=7.4e-08  Score=78.97  Aligned_cols=64  Identities=14%  Similarity=0.115  Sum_probs=50.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      |+++||||+|+||++++++|+++|++|.+++|+...    ........++.++++|++|.+++.+++.
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~   65 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP----SLAAAAGERLAEVELDLSDAAAAAAWLA   65 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch----hhhhccCCeEEEEEeccCCHHHHHHHHH
Confidence            589999999999999999999999999999997531    1111112457788999999999887553

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=98.67  E-value=1.3e-07  Score=78.46  Aligned_cols=77  Identities=22%  Similarity=0.140  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+....+...+.++++|++|.+++.++++.       +|+
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEK--LASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5799999999999999999999999999999987421  1111122224577889999999988777653       687


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        84 li~~ag   89 (263)
T PRK06200         84 FVGNAG   89 (263)
T ss_pred             EEECCC
Confidence            776544

>PRK08226 short chain dehydrogenase; Provisional

Probab=98.67  E-value=1.2e-07  Score=78.69  Aligned_cols=79  Identities=18%  Similarity=0.079  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+.......+.+......+.++.+|+++.+++.++++.       +|.
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999999999987521111111111113567789999999998887764       588


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        86 vi~~ag   91 (263)
T PRK08226         86 LVNNAG   91 (263)
T ss_pred             EEECCC
Confidence            777544

>PRK08264 short chain dehydrogenase; Validated

Probab=98.66  E-value=1.9e-07  Score=76.15  Aligned_cols=74  Identities=24%  Similarity=0.222  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~   79 (231)
                      .++++||||+|+||+++++.|+++|+ .|.++.|+...   .   .....++.++.+|++|.+++.++++.   +|++++
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~---~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   79 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES---V---TDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVN   79 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh---h---hhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            46899999999999999999999998 99999997531   1   11225688899999999999888875   688887


Q ss_pred             cccC
Q 043777           80 PSEY   83 (231)
Q Consensus        80 ps~~   83 (231)
                      ....
T Consensus        80 ~ag~   83 (238)
T PRK08264         80 NAGI   83 (238)
T ss_pred             CCCc
Confidence            6544

>PRK12743 oxidoreductase; Provisional

Probab=98.66  E-value=1.5e-07  Score=77.82  Aligned_cols=80  Identities=13%  Similarity=-0.065  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||+|+||++++++|+++|+.|.++.|+.....  ..+.+......+.++.+|++|.+++.++++.       +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999988876542211  0111111224578899999999988776653       6


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |.+++....
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            888775543

>PRK12939 short chain dehydrogenase; Provisional

Probab=98.66  E-value=1.2e-07  Score=77.64  Aligned_cols=79  Identities=18%  Similarity=0.024  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||+++++.|+++|+.|.++.|+..... ..+.++.....+.++.+|++|.+++.++++       ++|
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   86 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLD   86 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999988643210 011111111457788999999999887774       478


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        87 ~vi~~ag   93 (250)
T PRK12939         87 GLVNNAG   93 (250)
T ss_pred             EEEECCC
Confidence            8877543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.66  E-value=2.9e-08  Score=83.26  Aligned_cols=77  Identities=27%  Similarity=0.356  Sum_probs=52.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhh----c-CCcEE----EEEcCCCHHHHHHHHc--cC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVF----H-SGVFD----YWGLLEDEKSLLEAVK--QV   74 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~----~~~D~~d~~~l~~al~--~~   74 (231)
                      ||||||+|.||+.++++|++.+ ..+++++|+...  ......++    . .++.+    +.+|++|.+.+.++++  ++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~--l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p   78 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENK--LYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP   78 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHH--HHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhH--HHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence            7999999999999999999988 568899987542  11111222    2 34543    4789999999999999  79


Q ss_pred             CEEEEcccCCC
Q 043777           75 DVRFIPSEYGA   85 (231)
Q Consensus        75 d~~f~ps~~g~   85 (231)
                      |++||.+.+-.
T Consensus        79 diVfHaAA~Kh   89 (293)
T PF02719_consen   79 DIVFHAAALKH   89 (293)
T ss_dssp             SEEEE------
T ss_pred             CEEEEChhcCC
Confidence            99999876543

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK07478 short chain dehydrogenase; Provisional

Probab=98.66  E-value=1.3e-07  Score=78.13  Aligned_cols=77  Identities=18%  Similarity=0.122  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|.++|++|.+++|+...  ..+..+.+   ...+.++.+|++|.+++.++++       .
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE--LDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999999997532  11111222   2356788999999998887776       4


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        84 id~li~~ag   92 (254)
T PRK07478         84 LDIAFNNAG   92 (254)
T ss_pred             CCEEEECCC
Confidence            688776543

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.65  E-value=1.4e-07  Score=78.28  Aligned_cols=77  Identities=21%  Similarity=0.164  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+........+..+.+|++|.+++.++++       .+|+
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAG--LQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999999986421  111111112457788999999988877665       3688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        83 li~~Ag   88 (262)
T TIGR03325        83 LIPNAG   88 (262)
T ss_pred             EEECCC
Confidence            777543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05876 short chain dehydrogenase; Provisional

Probab=98.65  E-value=1.1e-07  Score=79.76  Aligned_cols=78  Identities=13%  Similarity=0.072  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||+++++.|+++|++|++..|+...  ..+..+.+.   ..+.++.+|++|.+++.++++.       
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~--l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPG--LRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999887532  111222222   3467789999999999887764       


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        84 id~li~nAg~   93 (275)
T PRK05876         84 VDVVFSNAGI   93 (275)
T ss_pred             CCEEEECCCc
Confidence            6887775543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.65  E-value=1.4e-07  Score=78.00  Aligned_cols=76  Identities=16%  Similarity=0.070  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||+++++.|+++|++|+++.|+...  ..+..+.....+.++.+|++|.+++.++++.       +|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPAR--ARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999987532  1111122234577889999999998887763       687


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      +++..
T Consensus        84 li~~a   88 (257)
T PRK07067         84 LFNNA   88 (257)
T ss_pred             EEECC
Confidence            77644

>PRK07904 short chain dehydrogenase; Provisional

Probab=98.65  E-value=1.8e-07  Score=77.44  Aligned_cols=76  Identities=16%  Similarity=0.125  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCC-ch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSAS-NF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~-~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~------~   73 (231)
                      .++|+||||+|+||++++++|+++| ++|+++.|+.+. .. ..+.+.... .++.++.+|++|++++.++++      +
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~   87 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD   87 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence            5789999999999999999999995 899999997642 11 111111212 367889999999988665554      4


Q ss_pred             CCEEEE
Q 043777           74 VDVRFI   79 (231)
Q Consensus        74 ~d~~f~   79 (231)
                      +|..++
T Consensus        88 id~li~   93 (253)
T PRK07904         88 VDVAIV   93 (253)
T ss_pred             CCEEEE
Confidence            787665

>PRK12827 short chain dehydrogenase; Provisional

Probab=98.64  E-value=2.4e-07  Score=75.81  Aligned_cols=79  Identities=14%  Similarity=0.077  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      +|+++||||+|+||+++++.|+++|++|+++.|....+.  ..+....+   ...+.++.+|++|.+++.++++      
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF   85 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            579999999999999999999999999998877532211  11111122   2456788999999999888774      


Q ss_pred             -cCCEEEEccc
Q 043777           73 -QVDVRFIPSE   82 (231)
Q Consensus        73 -~~d~~f~ps~   82 (231)
                       ++|.+++.+.
T Consensus        86 ~~~d~vi~~ag   96 (249)
T PRK12827         86 GRLDILVNNAG   96 (249)
T ss_pred             CCCCEEEECCC
Confidence             3788877554

>PRK06181 short chain dehydrogenase; Provisional

Probab=98.64  E-value=1.5e-07  Score=78.07  Aligned_cols=78  Identities=14%  Similarity=0.064  Sum_probs=58.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      ++++||||+|+||+++++.|+++|++|++++|+..... ..+.+......+.++.+|++|.+++.++++       ++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998743210 011111112456788999999999888776       4688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        82 vi~~ag   87 (263)
T PRK06181         82 LVNNAG   87 (263)
T ss_pred             EEECCC
Confidence            877543

>PRK08278 short chain dehydrogenase; Provisional

Probab=98.64  E-value=2.8e-07  Score=77.11  Aligned_cols=80  Identities=15%  Similarity=0.180  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-----hhhh---hhhhcCCcEEEEEcCCCHHHHHHHHc---
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-----NFSL---LRVFHSGVFDYWGLLEDEKSLLEAVK---   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-----~~~~---~~~~~~~v~~~~~D~~d~~~l~~al~---   72 (231)
                      +++++||||+|+||+++++.|+++|++|+++.|+.....     ..+.   +......+.++.+|+++.+++.++++   
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   85 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV   85 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999753211     0011   11112456788999999999887776   


Q ss_pred             ----cCCEEEEcccC
Q 043777           73 ----QVDVRFIPSEY   83 (231)
Q Consensus        73 ----~~d~~f~ps~~   83 (231)
                          .+|.+++.+.+
T Consensus        86 ~~~g~id~li~~ag~  100 (273)
T PRK08278         86 ERFGGIDICVNNASA  100 (273)
T ss_pred             HHhCCCCEEEECCCC
Confidence                46888876544

>PRK06057 short chain dehydrogenase; Provisional

Probab=98.64  E-value=2e-07  Score=77.01  Aligned_cols=75  Identities=17%  Similarity=0.096  Sum_probs=57.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++|+||||+|+||++++++|+++|++|++++|+...  ..+..+.  .+..++.+|++|.+++.++++.       +|+
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~--~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA--GKAAADE--VGGLFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHH--cCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999986421  0111111  2235788999999998887763       688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++.+.
T Consensus        83 vi~~ag   88 (255)
T PRK06057         83 AFNNAG   88 (255)
T ss_pred             EEECCC
Confidence            777544

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=98.63  E-value=1.1e-07  Score=78.70  Aligned_cols=77  Identities=14%  Similarity=0.072  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|++++|+...  .......+   ...+.++.+|++|++++.++++       .
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE--LEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999986421  11111122   1356788999999999876664       3


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++.+.
T Consensus        90 id~vi~~ag   98 (259)
T PRK08213         90 VDILVNNAG   98 (259)
T ss_pred             CCEEEECCC
Confidence            688877544

>PRK06196 oxidoreductase; Provisional

Probab=98.63  E-value=1.8e-07  Score=80.01  Aligned_cols=76  Identities=18%  Similarity=0.142  Sum_probs=58.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++|+||||+|+||++++++|+++|++|++++|+...  ..+....+ .++.++.+|++|.+++.++++       ++|+
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~--~~~~~~~l-~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDV--AREALAGI-DGVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHh-hhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            4789999999999999999999999999999997531  11111111 347889999999999887764       3788


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus       103 li~nAg  108 (315)
T PRK06196        103 LINNAG  108 (315)
T ss_pred             EEECCC
Confidence            777543

>PRK05854 short chain dehydrogenase; Provisional

Probab=98.63  E-value=1.3e-07  Score=80.95  Aligned_cols=79  Identities=16%  Similarity=0.116  Sum_probs=58.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||.+++++|+++|+.|++++|+..... ..+.+.. .. ..+.++.+|++|.+++.++++.       
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~   93 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRP   93 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999999753210 1111111 11 3577889999999998877654       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|+.++...
T Consensus        94 iD~li~nAG  102 (313)
T PRK05854         94 IHLLINNAG  102 (313)
T ss_pred             ccEEEECCc
Confidence            677776443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.63  E-value=1.8e-07  Score=77.32  Aligned_cols=78  Identities=12%  Similarity=0.038  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+... ...+.++....++.++.+|++|.+++.++++.       +|+
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP-ETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999988875421 11112222224577889999999998887763       687


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      .++...
T Consensus        87 lv~~ag   92 (251)
T PRK12481         87 LINNAG   92 (251)
T ss_pred             EEECCC
Confidence            776543

>PRK07063 short chain dehydrogenase; Provisional

Probab=98.63  E-value=1.8e-07  Score=77.52  Aligned_cols=79  Identities=22%  Similarity=0.090  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh--hcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV--FHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~--~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+..  ....+.++.+|++|++++.++++       .
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   86 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGP   86 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999653210 1111111  11346788999999999888776       4


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++...
T Consensus        87 id~li~~ag   95 (260)
T PRK07063         87 LDVLVNNAG   95 (260)
T ss_pred             CcEEEECCC
Confidence            788777544

>PRK05867 short chain dehydrogenase; Provisional

Probab=98.63  E-value=1.5e-07  Score=77.70  Aligned_cols=76  Identities=14%  Similarity=0.118  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|.++.|+...  ..+..+.+   ..++..+.+|++|++++.++++       .
T Consensus         9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA--LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999886432  11111222   1356678999999999887765       4


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|++++..
T Consensus        87 id~lv~~a   94 (253)
T PRK05867         87 IDIAVCNA   94 (253)
T ss_pred             CCEEEECC
Confidence            78877644

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=98.62  E-value=2.3e-07  Score=76.13  Aligned_cols=80  Identities=15%  Similarity=0.085  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||+.+++.|+++|++|.++.++.....  ..+.+......+.++.+|++|.+++.++++       .+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            378999999999999999999999999877665432111  011111112457789999999998877665       36


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++.+..
T Consensus        82 d~li~~ag~   90 (248)
T PRK06947         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCcc
Confidence            887775543

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.62  E-value=1.9e-07  Score=80.67  Aligned_cols=79  Identities=15%  Similarity=0.122  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+......+.++.+|++|.+++.++++       .+|
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD   87 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPID   87 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence            468999999999999999999999999999999742100 011111112456778999999999888765       378


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      +.++...
T Consensus        88 ~lInnAg   94 (334)
T PRK07109         88 TWVNNAM   94 (334)
T ss_pred             EEEECCC
Confidence            8776543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.62  E-value=2.7e-07  Score=75.75  Aligned_cols=80  Identities=13%  Similarity=0.088  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++..|+.....  ....+......+..+.+|+++.+++.++++       .+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999999888776532110  011111112345678899999998877766       36


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        86 d~vi~~ag~   94 (252)
T PRK06077         86 DILVNNAGL   94 (252)
T ss_pred             CEEEECCCC
Confidence            888876543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=98.62  E-value=1.4e-07  Score=77.06  Aligned_cols=74  Identities=14%  Similarity=0.219  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...     ..+.+. .++.++.+|++|.+++.++++.       +|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP-----AIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            3789999999999999999999999999999997532     111222 4578899999999988776654       57


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        77 ~lv~~ag   83 (236)
T PRK06483         77 AIIHNAS   83 (236)
T ss_pred             EEEECCc
Confidence            7666443

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.62  E-value=1.5e-07  Score=78.79  Aligned_cols=77  Identities=18%  Similarity=0.110  Sum_probs=57.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      .++++||||+|+||+++++.|+++|+.|.++.|+...  ..+....+   ...+.++.+|++|.+++.++++       .
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEK--CEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999998886421  11111111   1346678899999999988776       3


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++.+.
T Consensus        88 id~vi~~Ag   96 (274)
T PRK07775         88 IEVLVSGAG   96 (274)
T ss_pred             CCEEEECCC
Confidence            688777553

>PRK06949 short chain dehydrogenase; Provisional

Probab=98.62  E-value=1.8e-07  Score=77.24  Aligned_cols=77  Identities=19%  Similarity=0.104  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||+++++.|+++|+.|+++.|+...  ..+....+   ..++.++.+|+++.+++.++++.       
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVER--LKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999999997532  11111111   24577899999999998887764       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++-..
T Consensus        87 ~d~li~~ag   95 (258)
T PRK06949         87 IDILVNNSG   95 (258)
T ss_pred             CCEEEECCC
Confidence            688776443

>PRK06398 aldose dehydrogenase; Validated

Probab=98.62  E-value=3e-07  Score=76.23  Aligned_cols=69  Identities=14%  Similarity=0.162  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...          ...+..+.+|++|++++.++++       .+|+
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS----------YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc----------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999987521          0256788999999999887776       3688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        76 li~~Ag   81 (258)
T PRK06398         76 LVNNAG   81 (258)
T ss_pred             EEECCC
Confidence            777543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.61  E-value=2.2e-07  Score=76.27  Aligned_cols=79  Identities=15%  Similarity=0.095  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|+... ...+..+.+.   .++.++.+|++|.+++.++++.       
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKE-AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHH-HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999998876554321 1111112222   3577889999999999888876       


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++...+
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            6888886544

>PRK05650 short chain dehydrogenase; Provisional

Probab=98.61  E-value=2.1e-07  Score=77.60  Aligned_cols=76  Identities=16%  Similarity=0.115  Sum_probs=57.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      |+++||||+|+||++++++|+++|++|.+.+|+...  ..+....+   ...+.++.+|++|.+++.++++       .+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG--GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            479999999999999999999999999999987532  11111122   2456788999999998887775       47


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        79 d~lI~~ag   86 (270)
T PRK05650         79 DVIVNNAG   86 (270)
T ss_pred             CEEEECCC
Confidence            88777544

>PRK06197 short chain dehydrogenase; Provisional

Probab=98.61  E-value=1.3e-07  Score=80.46  Aligned_cols=79  Identities=15%  Similarity=0.056  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhh-hhc-CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLR-VFH-SGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~-~~~-~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++|+||||+|+||++++++|+++|++|+++.|+..... ..+.+. ... ..+.++.+|++|.+++.++++       .
T Consensus        16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~   95 (306)
T PRK06197         16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPR   95 (306)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCC
Confidence            478999999999999999999999999999999753210 011111 111 356788999999999887765       3


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++.+.
T Consensus        96 iD~li~nAg  104 (306)
T PRK06197         96 IDLLINNAG  104 (306)
T ss_pred             CCEEEECCc
Confidence            688777543

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.61  E-value=2e-07  Score=75.57  Aligned_cols=74  Identities=24%  Similarity=0.312  Sum_probs=57.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-----cCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-----QVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-----~~d~~f~   79 (231)
                      ++++||||+|++|+++++.|+++|++|.+++|+...   .+.+... .++.++.+|++|.+++.++++     ++|++++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ---DTALQAL-PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcc---hHHHHhc-cccceEEcCCCCHHHHHHHHHHhhcCCCCEEEE
Confidence            589999999999999999999999999999997642   1111121 457788899999998877776     3788887


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      .+.
T Consensus        78 ~ag   80 (225)
T PRK08177         78 NAG   80 (225)
T ss_pred             cCc
Confidence            543

>PRK08017 oxidoreductase; Provisional

Probab=98.61  E-value=1.3e-07  Score=77.91  Aligned_cols=75  Identities=20%  Similarity=0.216  Sum_probs=56.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--------CCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--------VDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--------~d~   76 (231)
                      ++++||||+|+||+++++.|+++|++|+++.|+...   .+.+..  .++..+.+|++|.+++.++++.        +|.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDD---VARMNS--LGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---hHHHHh--CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            689999999999999999999999999999987521   111111  4678899999999887766543        355


Q ss_pred             EEEcccCC
Q 043777           77 RFIPSEYG   84 (231)
Q Consensus        77 ~f~ps~~g   84 (231)
                      +++.+.++
T Consensus        78 ii~~ag~~   85 (256)
T PRK08017         78 LFNNAGFG   85 (256)
T ss_pred             EEECCCCC
Confidence            66655443

>PRK06841 short chain dehydrogenase; Provisional

Probab=98.61  E-value=2.5e-07  Score=76.23  Aligned_cols=76  Identities=16%  Similarity=0.090  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||+++++.|+++|+.|+++.|+...   .+...... ..+..+.+|+++.+++.+++++       +|
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV---AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999999999987531   11112222 4566889999999988877753       68


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        92 ~vi~~ag   98 (255)
T PRK06841         92 ILVNSAG   98 (255)
T ss_pred             EEEECCC
Confidence            8777544

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=98.61  E-value=1.2e-07  Score=77.94  Aligned_cols=77  Identities=17%  Similarity=0.116  Sum_probs=57.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|+... ...+.+......+.++.+|+++.+++.++++       .+|+
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPS-ETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999986421 1111122222457889999999999887665       3677


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      +++..
T Consensus        84 li~~a   88 (248)
T TIGR01832        84 LVNNA   88 (248)
T ss_pred             EEECC
Confidence            66643

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.60  E-value=1e-06  Score=74.74  Aligned_cols=67  Identities=16%  Similarity=0.161  Sum_probs=46.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cCCEEEE
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QVDVRFI   79 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~d~~f~   79 (231)
                      |+||||||+||+++++.|+++|+ .|.++.|.....    .+..  .....+.+|+++.+.+..+.+    ++|++++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~----~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh   72 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH----KFLN--LADLVIADYIDKEDFLDRLEKGAFGKIEAIFH   72 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch----hhhh--hhheeeeccCcchhHHHHHHhhccCCCCEEEE
Confidence            68999999999999999999997 687777654211    0111  112345677877777766654    6787665

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.60  E-value=3.9e-07  Score=75.32  Aligned_cols=79  Identities=14%  Similarity=0.127  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      +++++||||+|+||+++++.|+++|++|.++.++.....  ..+..+.+   ...+.++++|++|.+++.++++      
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            478999999999999999999999999777776532211  11111222   2356788999999999887776      


Q ss_pred             -cCCEEEEccc
Q 043777           73 -QVDVRFIPSE   82 (231)
Q Consensus        73 -~~d~~f~ps~   82 (231)
                       .+|++++...
T Consensus        88 ~~id~li~~ag   98 (257)
T PRK12744         88 GRPDIAINTVG   98 (257)
T ss_pred             CCCCEEEECCc
Confidence             3688777554

>PRK07856 short chain dehydrogenase; Provisional

Probab=98.60  E-value=1.7e-07  Score=77.24  Aligned_cols=71  Identities=20%  Similarity=0.093  Sum_probs=57.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      .++++||||+|+||++++++|+++|++|++++|+...       .....++.++++|++|.+++.++++.       +|+
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997521       11124677899999999998887764       488


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      +++..
T Consensus        79 vi~~a   83 (252)
T PRK07856         79 LVNNA   83 (252)
T ss_pred             EEECC
Confidence            88754

>PRK06500 short chain dehydrogenase; Provisional

Probab=98.60  E-value=2.5e-07  Score=75.80  Aligned_cols=77  Identities=18%  Similarity=0.137  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|+...  ..+..+.+...+.++++|++|.+++..+++       .+|+
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPAS--LEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHH--HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4799999999999999999999999999999886421  111122223456788999999887765544       4788


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        84 vi~~ag   89 (249)
T PRK06500         84 VFINAG   89 (249)
T ss_pred             EEECCC
Confidence            887544

>PRK06114 short chain dehydrogenase; Provisional

Probab=98.60  E-value=2.7e-07  Score=76.26  Aligned_cols=78  Identities=12%  Similarity=0.042  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      .++++||||+|+||++++++|.++|++|.++.|+..... .+..+.+   ...+..+.+|++|++++.++++.       
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGL-AETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999998753211 1111222   23567889999999998877764       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        87 id~li~~ag   95 (254)
T PRK06114         87 LTLAVNAAG   95 (254)
T ss_pred             CCEEEECCC
Confidence            577776543

>PRK07576 short chain dehydrogenase; Provisional

Probab=98.60  E-value=1.4e-07  Score=78.55  Aligned_cols=78  Identities=17%  Similarity=0.100  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|+..... ..+.+.....++.++.+|++|++++.+++++       +|
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD   88 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPID   88 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999998753210 0111111123567789999999998887765       58


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      ++++..
T Consensus        89 ~vi~~a   94 (264)
T PRK07576         89 VLVSGA   94 (264)
T ss_pred             EEEECC
Confidence            777643

>PRK07577 short chain dehydrogenase; Provisional

Probab=98.60  E-value=3.3e-07  Score=74.47  Aligned_cols=71  Identities=23%  Similarity=0.192  Sum_probs=57.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------cC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------QV   74 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------~~   74 (231)
                      |. .++++||||+|+||+++++.|+++|++|+++.|+...        .  ....++.+|++|.+++.++++      ++
T Consensus         1 ~~-~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~--------~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   69 (234)
T PRK07577          1 MS-SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--------D--FPGELFACDLADIEQTAATLAQINEIHPV   69 (234)
T ss_pred             CC-CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc--------c--cCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence            44 5789999999999999999999999999999997531        1  122578899999998887776      46


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++.+.
T Consensus        70 d~vi~~ag   77 (234)
T PRK07577         70 DAIVNNVG   77 (234)
T ss_pred             cEEEECCC
Confidence            88777544

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=98.59  E-value=2e-07  Score=77.99  Aligned_cols=77  Identities=14%  Similarity=0.122  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      .++++||||+|+||++++++|+++|++|.++.|+...  ..+..+.+   ..++.++++|++|.+++..+++       .
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK--AEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999987431  11111222   1346788999999998877665       4


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        88 id~li~~ag   96 (278)
T PRK08277         88 CDILINGAG   96 (278)
T ss_pred             CCEEEECCC
Confidence            788777543

>PRK12367 short chain dehydrogenase; Provisional

Probab=98.59  E-value=3.8e-07  Score=75.38  Aligned_cols=76  Identities=18%  Similarity=0.085  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcccC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEY   83 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~   83 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+....  ..  .........+.+|++|.+++.+.+.++|+.++.+..
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~--~~--~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINN--SE--SNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhh--hh--hhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            47899999999999999999999999999999875211  10  011122356789999999999999889998886644

>PRK07825 short chain dehydrogenase; Provisional

Probab=98.59  E-value=1.2e-07  Score=79.11  Aligned_cols=76  Identities=17%  Similarity=0.002  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||||+||++++++|+++|++|.+..|+...  ..+....+ ..+.++.+|++|++++.++++.       +|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEAL--AKETAAEL-GLVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHh-ccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999886421  11111111 2477889999999988776654       567


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        82 li~~ag   87 (273)
T PRK07825         82 LVNNAG   87 (273)
T ss_pred             EEECCC
Confidence            666543

>PRK06128 oxidoreductase; Provisional

Probab=98.59  E-value=2.8e-07  Score=78.21  Aligned_cols=79  Identities=16%  Similarity=0.035  Sum_probs=57.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhh---hhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNF---SLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~---~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|.+..|+.......   +.++.....+.++.+|++|.+++.++++       .
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  134 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGG  134 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999998877754321111   1111222456778999999998877765       4


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus       135 iD~lV~nAg  143 (300)
T PRK06128        135 LDILVNIAG  143 (300)
T ss_pred             CCEEEECCc
Confidence            688877554

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.58  E-value=3.2e-07  Score=81.02  Aligned_cols=77  Identities=22%  Similarity=0.185  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      +++++||||+|+||++++++|.++|++|.+++|+...  ..........++..+.+|++|.+++.+.+.++|+.++...
T Consensus       178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~--l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG  254 (406)
T PRK07424        178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDK--ITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG  254 (406)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence            5789999999999999999999999999999987421  1111111113466788999999999999999999887543

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=98.58  E-value=2e-07  Score=76.86  Aligned_cols=77  Identities=14%  Similarity=0.135  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+....+.   ..+..+.+|++|.+++.++++.       
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER--AELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999987532  111112222   3456788999999998877653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++...
T Consensus        87 id~vi~~ag   95 (254)
T PRK08085         87 IDVLINNAG   95 (254)
T ss_pred             CCEEEECCC
Confidence            687777543

>PRK08339 short chain dehydrogenase; Provisional

Probab=98.58  E-value=2.7e-07  Score=76.88  Aligned_cols=76  Identities=17%  Similarity=0.145  Sum_probs=57.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      .++++||||+|+||++++++|+++|++|.+++|+...  ..+..+.+    ..++..+.+|++|++++.++++.      
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEEN--LKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            4789999999999999999999999999999987432  11111121    13577889999999998887763      


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|+.++..
T Consensus        86 iD~lv~na   93 (263)
T PRK08339         86 PDIFFFST   93 (263)
T ss_pred             CcEEEECC
Confidence            67766544

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=98.58  E-value=2.9e-07  Score=76.51  Aligned_cols=77  Identities=17%  Similarity=0.130  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      .++++||||+|+||++++++|+++|++|+++.|+....  .+....+.   .++.++.+|++|.+++.+++..       
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV--DKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH--HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999988865321  11112222   3577889999999998887764       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        88 id~li~~ag   96 (265)
T PRK07097         88 IDILVNNAG   96 (265)
T ss_pred             CCEEEECCC
Confidence            688776544

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=98.58  E-value=3.2e-07  Score=74.96  Aligned_cols=78  Identities=19%  Similarity=0.053  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|+.|.+..|+...  ..+.......++.++.+|++|.+++.++++       .+|.
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEK--LEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999988777776421  111112222457788999999999887754       3788


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++.+..
T Consensus        84 vi~~ag~   90 (245)
T PRK12936         84 LVNNAGI   90 (245)
T ss_pred             EEECCCC
Confidence            8775543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=98.58  E-value=3.9e-07  Score=74.67  Aligned_cols=81  Identities=20%  Similarity=0.161  Sum_probs=57.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc-----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      |+ ++.++||||+|+||++++++|+++|+.|++..+..... ..+.++.+.   ..+..+.+|++|.+++.++++     
T Consensus         1 ~~-~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MS-QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPR-RVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45 67899999999999999999999999988765432211 111222222   345667899999998877765     


Q ss_pred             --cCCEEEEcccC
Q 043777           73 --QVDVRFIPSEY   83 (231)
Q Consensus        73 --~~d~~f~ps~~   83 (231)
                        .+|++++....
T Consensus        79 ~~~id~li~~ag~   91 (246)
T PRK12938         79 VGEIDVLVNNAGI   91 (246)
T ss_pred             hCCCCEEEECCCC
Confidence              47888875543

>PRK09072 short chain dehydrogenase; Provisional

Probab=98.57  E-value=2.2e-07  Score=77.13  Aligned_cols=78  Identities=17%  Similarity=0.089  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHc------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVK------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~------~~d   75 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+  ...+.++.+|++|.+++.++++      .+|
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEK--LEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999999999997431  11111121  2467889999999998877655      368


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      .+++.+..
T Consensus        83 ~lv~~ag~   90 (263)
T PRK09072         83 VLINNAGV   90 (263)
T ss_pred             EEEECCCC
Confidence            88876543

>PRK06523 short chain dehydrogenase; Provisional

Probab=98.57  E-value=2.3e-07  Score=76.73  Aligned_cols=71  Identities=20%  Similarity=0.135  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|.++|++|+++.|+...        .....+.++.+|++|.+++.++++       .+|+
T Consensus         9 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523          9 GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD--------DLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh--------hcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999997521        112457789999999998776554       3688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        81 vi~~ag   86 (260)
T PRK06523         81 LVHVLG   86 (260)
T ss_pred             EEECCc
Confidence            777543

>PRK05884 short chain dehydrogenase; Provisional

Probab=98.57  E-value=2.6e-07  Score=75.09  Aligned_cols=72  Identities=19%  Similarity=0.012  Sum_probs=55.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~d~~f~p   80 (231)
                      |+++||||+|+||+++++.|.++|++|+++.|+...  ..+..+.  .++.++++|++|++++.++++    .+|..++.
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~--~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDD--LEVAAKE--LDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHh--ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence            479999999999999999999999999999987421  0111111  246788999999999988776    36877764

>PRK08589 short chain dehydrogenase; Validated

Probab=98.57  E-value=1.5e-07  Score=78.76  Aligned_cols=76  Identities=17%  Similarity=0.125  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|+ .. . .+....+   ...+..+.+|++|.+++.++++.       
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~-~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA-V-SETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH-H-HHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997 22 1 1112222   23577889999999988776653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        83 id~li~~Ag   91 (272)
T PRK08589         83 VDVLFNNAG   91 (272)
T ss_pred             cCEEEECCC
Confidence            577776543

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.56  E-value=4.2e-07  Score=74.53  Aligned_cols=78  Identities=13%  Similarity=0.089  Sum_probs=56.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      ++++||||+|+||++++++|+++|+.|++..|+... ...+....+   ...+.++.+|++|.+++.++++       .+
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRD-AAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHH-HHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999988776654311 111111122   2346688999999999888776       36


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++...+
T Consensus        82 d~li~~ag~   90 (248)
T PRK06123         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            887775543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=98.56  E-value=2.8e-07  Score=76.10  Aligned_cols=79  Identities=13%  Similarity=0.069  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++|+||||+|+||++++++|.++|+.|++++|+..... ..+.+......+.++.+|++|.+++.++++.       +|
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d   90 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD   90 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            579999999999999999999999999999888643210 1111111123567789999999998876653       57


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++.+.
T Consensus        91 ~li~~ag   97 (255)
T PRK06113         91 ILVNNAG   97 (255)
T ss_pred             EEEECCC
Confidence            7777544

>PRK06701 short chain dehydrogenase; Provisional

Probab=98.56  E-value=5e-07  Score=76.39  Aligned_cols=79  Identities=15%  Similarity=0.051  Sum_probs=58.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +|+++||||+|+||++++++|+++|++|+++.|+.....  ....+......+.++.+|++|.+++.++++.       +
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~i  125 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRL  125 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999988753211  1111111113467889999999988877753       6


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus       126 D~lI~~Ag  133 (290)
T PRK06701        126 DILVNNAA  133 (290)
T ss_pred             CEEEECCc
Confidence            88777544

>PRK06139 short chain dehydrogenase; Provisional

Probab=98.56  E-value=3.6e-07  Score=78.79  Aligned_cols=78  Identities=15%  Similarity=0.080  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|.++|++|+++.|+...  ..+..+.+   ...+.++.+|++|.+++.++++       .
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~--l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEA--LQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999997532  11111222   2456678999999999888774       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|+.++....
T Consensus        85 iD~lVnnAG~   94 (330)
T PRK06139         85 IDVWVNNVGV   94 (330)
T ss_pred             CCEEEECCCc
Confidence            7887775543

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.55  E-value=4.3e-07  Score=74.27  Aligned_cols=75  Identities=21%  Similarity=0.160  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p   80 (231)
                      +++++||||+|+||+++++.|+++|++|++++|+...   .+.+.. ..++.++.+|++|.+++.++++.   +|++++.
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~---~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAA---LDRLAG-ETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHH-HhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            4689999999999999999999999999999987421   111111 13567889999999999888874   7888875


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      ..
T Consensus        85 ag   86 (245)
T PRK07060         85 AG   86 (245)
T ss_pred             CC
Confidence            43

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=98.55  E-value=3.9e-07  Score=74.42  Aligned_cols=77  Identities=19%  Similarity=0.100  Sum_probs=58.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      ++++||||+|+||+++++.|.++|+.|+++.|+..... .+.....   ...+.++.+|++|.+++.+++++       +
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCA-KDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHH-HHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999998753111 1111111   13578899999999998887754       6


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++.+.
T Consensus        82 d~vi~~ag   89 (245)
T PRK12824         82 DILVNNAG   89 (245)
T ss_pred             CEEEECCC
Confidence            88777554

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.55  E-value=7e-07  Score=76.67  Aligned_cols=77  Identities=22%  Similarity=0.250  Sum_probs=58.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCch-hhhh---hh------hhc-CCcEEEEEcCCC------HHH
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNF-NFSL---LR------VFH-SGVFDYWGLLED------EKS   66 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~-~~~~---~~------~~~-~~v~~~~~D~~d------~~~   66 (231)
                      +++++||||||+|++++.+|+.+- .+|++++|..+... ++.+   ..      +.. .+++++.+|+..      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999875 59999999876411 1111   11      122 678999999984      456


Q ss_pred             HHHHHccCCEEEEcc
Q 043777           67 LLEAVKQVDVRFIPS   81 (231)
Q Consensus        67 l~~al~~~d~~f~ps   81 (231)
                      +.+..+.+|.+||+.
T Consensus        81 ~~~La~~vD~I~H~g   95 (382)
T COG3320          81 WQELAENVDLIIHNA   95 (382)
T ss_pred             HHHHhhhcceEEecc
Confidence            788888899999874

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=98.55  E-value=3.4e-07  Score=75.67  Aligned_cols=79  Identities=15%  Similarity=0.119  Sum_probs=57.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|.++|+.|++++|+..... ..+.+.. .. ..+.++.+|++|.+++.+++++       
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999998753210 0111111 11 3477889999999988777653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        82 id~vv~~ag   90 (259)
T PRK12384         82 VDLLVYNAG   90 (259)
T ss_pred             CCEEEECCC
Confidence            577776443

>PRK05855 short chain dehydrogenase; Validated

Probab=98.54  E-value=1.8e-06  Score=79.28  Aligned_cols=80  Identities=19%  Similarity=0.069  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      .++++||||+|+||++++++|.++|++|++++|+..... ..+.+.....++.++.+|++|.+++.++++.       +|
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  394 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPD  394 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence            478999999999999999999999999999999753210 0111111124567889999999998887764       68


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++.+..
T Consensus       395 ~lv~~Ag~  402 (582)
T PRK05855        395 IVVNNAGI  402 (582)
T ss_pred             EEEECCcc
Confidence            87775543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.54  E-value=1.8e-07  Score=76.56  Aligned_cols=76  Identities=12%  Similarity=0.075  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEE-cCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALI-RDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~-R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      ++++||||+|+||++++++|+++|++|.++. |+...  ..+....+   ...+.++.+|++|++++.+++++       
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHA--AQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHH--HHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            4799999999999999999999999987754 43211  11111111   23567889999999999888775       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        80 id~vi~~ag   88 (247)
T PRK09730         80 LAALVNNAG   88 (247)
T ss_pred             CCEEEECCC
Confidence            467766543

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.53  E-value=1.9e-06  Score=71.30  Aligned_cols=71  Identities=24%  Similarity=0.223  Sum_probs=55.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhc----CCcEEEEEcCCCHHHHHHHHccC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFH----SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~----~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      +|+.||||-||+-|+++++.|++.||.|+.+.|+.+. ++..-.+...+    ..+.++.+|++|...+.++++.+
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc
Confidence            4789999999999999999999999999999998654 22100111222    34778899999999999999874

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.53  E-value=1.6e-06  Score=69.58  Aligned_cols=25  Identities=28%  Similarity=0.480  Sum_probs=23.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH   29 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~   29 (231)
                      ++|+|||++|.+|++|.+.+..+|.
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~   26 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGF   26 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCC
Confidence            6899999999999999999999986

>PRK12747 short chain dehydrogenase; Provisional

Probab=98.53  E-value=5.5e-07  Score=74.20  Aligned_cols=82  Identities=16%  Similarity=0.090  Sum_probs=56.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      |.++++++||||+|+||++++++|.++|+.|.+..++.... ..+....+   ...+..+.+|+++.+++..+++     
T Consensus         1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE-AEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHH-HHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence            55678999999999999999999999999988775432111 11111112   1345677899999877654332     


Q ss_pred             --------cCCEEEEcccC
Q 043777           73 --------QVDVRFIPSEY   83 (231)
Q Consensus        73 --------~~d~~f~ps~~   83 (231)
                              .+|++++...+
T Consensus        80 ~~~~~g~~~id~lv~~Ag~   98 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGI   98 (252)
T ss_pred             hhhhcCCCCCCEEEECCCc
Confidence                    47877775544

>TIGR02415 23BDH acetoin reductases

Probab=98.53  E-value=3.1e-07  Score=75.62  Aligned_cols=76  Identities=17%  Similarity=0.143  Sum_probs=57.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      ++++||||+|+||++++++|++.|+.|+++.|+...  ..+..+.+   ...+.++.+|++|++++.++++.       +
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET--AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            479999999999999999999999999999887421  11111222   24567889999999998877653       5


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++.+.
T Consensus        79 d~vi~~ag   86 (254)
T TIGR02415        79 DVMVNNAG   86 (254)
T ss_pred             CEEEECCC
Confidence            88777543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12742 oxidoreductase; Provisional

Probab=98.53  E-value=6.2e-07  Score=73.02  Aligned_cols=77  Identities=19%  Similarity=0.223  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p   80 (231)
                      +++|+||||+|+||++++++|+++|++|.++.|+... ...+....  .++..+.+|++|.+++.++++.   +|++++.
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~-~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   82 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD-AAERLAQE--TGATAVQTDSADRDAVIDVVRKSGALDILVVN   82 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH-HHHHHHHH--hCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence            4789999999999999999999999998877664321 11111111  3567788999999988887764   6887776


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        83 ag~   85 (237)
T PRK12742         83 AGI   85 (237)
T ss_pred             CCC
Confidence            543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=98.52  E-value=2.2e-07  Score=76.66  Aligned_cols=76  Identities=16%  Similarity=0.143  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|+...  ..+....+   ..++.++.+|++|++++.+++++       
T Consensus        11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124         11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT--LEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999997521  11111222   24577889999999998887764       


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|.+++..
T Consensus        89 id~vi~~a   96 (256)
T PRK06124         89 LDILVNNV   96 (256)
T ss_pred             CCEEEECC
Confidence            46666644

>PRK06198 short chain dehydrogenase; Provisional

Probab=98.52  E-value=4.8e-07  Score=74.78  Aligned_cols=78  Identities=17%  Similarity=0.096  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      .++++||||+|+||+++++.|+++|+. |.++.|+..... ..+.+......+.++.+|+++++++.++++.       +
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRL   85 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999998 888888643211 0111111123566789999999988877753       6


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |.+++..
T Consensus        86 d~li~~a   92 (260)
T PRK06198         86 DALVNAA   92 (260)
T ss_pred             CEEEECC
Confidence            8877654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=98.52  E-value=2e-07  Score=77.29  Aligned_cols=76  Identities=22%  Similarity=0.266  Sum_probs=57.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      |+++||||+|+||+.++++|+++|+.|.++.|+...  ..+..+.+.  ..+.++.+|++|.+++.++++       .+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEEN--LEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999999999999987532  111112222  357788999999999887775       368


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        79 ~li~naG   85 (259)
T PRK08340         79 ALVWNAG   85 (259)
T ss_pred             EEEECCC
Confidence            7776543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=98.52  E-value=6.3e-07  Score=73.64  Aligned_cols=71  Identities=17%  Similarity=0.145  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      .++++||||+|+||+.++++|+++|++|+++.|+..        ......+..+++|++|.+++.+++++       +|+
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL--------TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh--------hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999998641        11124577889999999999888765       688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        80 vi~~ag   85 (252)
T PRK08220         80 LVNAAG   85 (252)
T ss_pred             EEECCC
Confidence            777543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.52  E-value=2.9e-07  Score=76.36  Aligned_cols=77  Identities=12%  Similarity=0.037  Sum_probs=56.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      +++++||||+++||++++++|++.|+.|+++.|+..... ......+    ...+.++.+|++|++++.++++.      
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEA-NKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999999988776532111 1111111    13567889999999988777764      


Q ss_pred             -CCEEEEcc
Q 043777           74 -VDVRFIPS   81 (231)
Q Consensus        74 -~d~~f~ps   81 (231)
                       +|++++..
T Consensus        87 ~id~lv~nA   95 (260)
T PRK08416         87 RVDFFISNA   95 (260)
T ss_pred             CccEEEECc
Confidence             57766644

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.51  E-value=3e-07  Score=76.06  Aligned_cols=73  Identities=23%  Similarity=0.190  Sum_probs=47.5

Q ss_pred             EEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCc-hhhhhhh---------h----hcCCcEEEEEcCCCH------HH
Q 043777            9 VIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASN-FNFSLLR---------V----FHSGVFDYWGLLEDE------KS   66 (231)
Q Consensus         9 VtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~-~~~~~~~---------~----~~~~v~~~~~D~~d~------~~   66 (231)
                      |||||||+|++++++|++++.  .|+++.|..+.. ......+         .    ...+++++.||++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  899999986431 1111100         1    137899999999985      45


Q ss_pred             HHHHHccCCEEEEcc
Q 043777           67 LLEAVKQVDVRFIPS   81 (231)
Q Consensus        67 l~~al~~~d~~f~ps   81 (231)
                      +..+.+++|++||..
T Consensus        81 ~~~L~~~v~~IiH~A   95 (249)
T PF07993_consen   81 YQELAEEVDVIIHCA   95 (249)
T ss_dssp             HHHHHHH--EEEE--
T ss_pred             hhccccccceeeecc
Confidence            677778899999854

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07677 short chain dehydrogenase; Provisional

Probab=98.50  E-value=3.1e-07  Score=75.71  Aligned_cols=78  Identities=15%  Similarity=0.133  Sum_probs=57.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||+++++.|+++|+.|+++.|+..... ..+.+......+.++.+|++|++++.++++.       +|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            368999999999999999999999999999998753211 1111111124577889999999988876653       57


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      .+++..
T Consensus        81 ~lI~~a   86 (252)
T PRK07677         81 ALINNA   86 (252)
T ss_pred             EEEECC
Confidence            766543

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=98.50  E-value=5.2e-07  Score=76.71  Aligned_cols=74  Identities=27%  Similarity=0.251  Sum_probs=55.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS   81 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps   81 (231)
                      +|+||||||+||++++++|+++|++|+++.|......  .......  .++..+.+|+++.+++.++++  ++|++++..
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a   78 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSP--EALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA   78 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccch--hhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence            5899999999999999999999999988766432111  1111111  256788999999999999987  478877644

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=98.50  E-value=5.5e-07  Score=74.80  Aligned_cols=71  Identities=11%  Similarity=0.081  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||+++++.|+++|+.|.++.|+....      .  ...+..+.+|++|++++.++++.       +|.
T Consensus         9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171          9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG------Q--HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc------c--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999998875310      0  14567889999999998877664       577


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        81 li~~Ag   86 (266)
T PRK06171         81 LVNNAG   86 (266)
T ss_pred             EEECCc
Confidence            776443

>PRK07062 short chain dehydrogenase; Provisional

Probab=98.50  E-value=3.1e-07  Score=76.24  Aligned_cols=79  Identities=18%  Similarity=0.092  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      .++++||||+|+||++++++|+++|+.|++++|+.....  ..+...... ..+..+.+|++|.+++.++++.       
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGG   87 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999753211  111111111 2466789999999988776653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++...
T Consensus        88 id~li~~Ag   96 (265)
T PRK07062         88 VDMLVNNAG   96 (265)
T ss_pred             CCEEEECCC
Confidence            577776544

>PLN02996 fatty acyl-CoA reductase

Probab=98.49  E-value=5.3e-07  Score=81.76  Aligned_cols=79  Identities=19%  Similarity=0.237  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC---CEEEEEcCCCC-chhh----hh-----hh-----------hhc-CCcEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH---PKFALIRDSAS-NFNF----SL-----LR-----------VFH-SGVFDYW   58 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~---~v~~~~R~~~~-~~~~----~~-----~~-----------~~~-~~v~~~~   58 (231)
                      +++|+|||||||+|+++++.|++.+.   .|+++.|.... .+..    +.     .+           .+. .++.++.
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~   90 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP   90 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence            68999999999999999999998653   57899997643 1110    10     00           001 4678899


Q ss_pred             EcCC-------CHHHHHHHHccCCEEEEccc
Q 043777           59 GLLE-------DEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus        59 ~D~~-------d~~~l~~al~~~d~~f~ps~   82 (231)
                      +|++       +.+.+.++++++|++||.+.
T Consensus        91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA  121 (491)
T PLN02996         91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAA  121 (491)
T ss_pred             cccCCcCCCCChHHHHHHHHhCCCEEEECcc
Confidence            9998       45567788899999998654

>PRK06953 short chain dehydrogenase; Provisional

Probab=98.49  E-value=4.6e-07  Score=73.34  Aligned_cols=71  Identities=24%  Similarity=0.254  Sum_probs=55.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-----cCCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-----QVDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-----~~d~~f   78 (231)
                      ++++||||+|+||++++++|+++|++|.+++|+...   .   +.+. .++.++.+|++|.+++.++++     .+|.++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~---~---~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAA---L---AALQALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHH---H---HHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999999999999999999999987431   1   1222 456788999999999888643     267777


Q ss_pred             Ecc
Q 043777           79 IPS   81 (231)
Q Consensus        79 ~ps   81 (231)
                      +..
T Consensus        76 ~~a   78 (222)
T PRK06953         76 YVA   78 (222)
T ss_pred             ECC
Confidence            644

>PRK07035 short chain dehydrogenase; Provisional

Probab=98.49  E-value=3.5e-07  Score=75.33  Aligned_cols=77  Identities=12%  Similarity=0.045  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||.+++++|+++|++|++++|+...  ..+..+.+   ...+..+.+|+.|.+++.++++.       
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG--CQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999986421  11122222   13466789999999988776653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        86 id~li~~ag   94 (252)
T PRK07035         86 LDILVNNAA   94 (252)
T ss_pred             CCEEEECCC
Confidence            677666443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=98.47  E-value=1.1e-06  Score=72.74  Aligned_cols=78  Identities=12%  Similarity=0.078  Sum_probs=57.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      .++++||||+|+||+++++.|+++|+.|++..|+..... ......+   ...+.++.+|++|.+++.++++.       
T Consensus         7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEA-NDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            579999999999999999999999999988888542211 1111122   23466789999999988777653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        86 id~lv~~ag   94 (261)
T PRK08936         86 LDVMINNAG   94 (261)
T ss_pred             CCEEEECCC
Confidence            687776544

>PRK07985 oxidoreductase; Provisional

Probab=98.47  E-value=5.5e-07  Score=76.28  Aligned_cols=79  Identities=16%  Similarity=0.050  Sum_probs=56.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhh---hhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSL---LRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~---~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      .++++||||+|+||++++++|+++|++|++..|+.......+.   ++.....+.++.+|++|.+++.++++.       
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  128 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGG  128 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999887765422111111   111123466789999999988776653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|+.++...
T Consensus       129 id~lv~~Ag  137 (294)
T PRK07985        129 LDIMALVAG  137 (294)
T ss_pred             CCEEEECCC
Confidence            577776543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.47  E-value=4.2e-07  Score=74.04  Aligned_cols=75  Identities=13%  Similarity=0.200  Sum_probs=56.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++|+||||+|+||+++++.|+++|++|++++|+...  .........  .++.++.+|+++.+++.+++++       +
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENK--LKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999999997531  111112222  3577889999999998877654       4


Q ss_pred             CEEEEc
Q 043777           75 DVRFIP   80 (231)
Q Consensus        75 d~~f~p   80 (231)
                      |.+++.
T Consensus        83 d~ii~~   88 (238)
T PRK05786         83 DGLVVT   88 (238)
T ss_pred             CEEEEc
Confidence            666654

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.47  E-value=7.1e-07  Score=82.37  Aligned_cols=79  Identities=20%  Similarity=0.196  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC---CEEEEEcCCCCc-hhhhhhhh--------------------h-cCCcEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH---PKFALIRDSASN-FNFSLLRV--------------------F-HSGVFDYW   58 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~---~v~~~~R~~~~~-~~~~~~~~--------------------~-~~~v~~~~   58 (231)
                      .++|+|||||||+|++|++.|++.+.   .|+++.|..... +.....+.                    + ..++.++.
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~  198 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV  198 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence            68999999999999999999998764   578999975431 11111000                    0 13577899


Q ss_pred             EcCCCH------HHHHHHHccCCEEEEccc
Q 043777           59 GLLEDE------KSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus        59 ~D~~d~------~~l~~al~~~d~~f~ps~   82 (231)
                      +|++++      +....+.+++|++||.+.
T Consensus       199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA  228 (605)
T PLN02503        199 GNVCESNLGLEPDLADEIAKEVDVIINSAA  228 (605)
T ss_pred             eeCCCcccCCCHHHHHHHHhcCCEEEECcc
Confidence            999987      456666678999998654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.47  E-value=5.3e-07  Score=74.58  Aligned_cols=75  Identities=11%  Similarity=0.063  Sum_probs=56.3

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+  ++||+.++++|+++|++|++..|+..   ..+.++++. ..+..+++|++|++++.++++.       
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR---MKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK   83 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH---HHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999  79999999999999999999888631   111222332 4567889999999988776543       


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|+.+...
T Consensus        84 iD~lv~nA   91 (252)
T PRK06079         84 IDGIVHAI   91 (252)
T ss_pred             CCEEEEcc
Confidence            67766544

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.46  E-value=6.6e-07  Score=72.96  Aligned_cols=77  Identities=21%  Similarity=0.082  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      ++++||||+|+||+++++.|+++|+.|+++.|+... ...+.....   ..++.++.+|++|++++.+++++       +
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEE-RAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            479999999999999999999999999998884211 111111111   14577899999999988776653       6


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |.+++...
T Consensus        80 d~vi~~ag   87 (242)
T TIGR01829        80 DVLVNNAG   87 (242)
T ss_pred             cEEEECCC
Confidence            88877554

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.46  E-value=7.3e-07  Score=74.44  Aligned_cols=76  Identities=17%  Similarity=0.040  Sum_probs=55.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---c-CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---H-SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~-~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      |+++||||+|+||+++++.|+++|+.|+++.|+...  ..+..+.+   . ..+.++.+|++|++++.++++.       
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG--LAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            479999999999999999999999999998886421  11111122   1 2234578999999988766654       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|.+++.+.
T Consensus        79 id~lv~~ag   87 (272)
T PRK07832         79 MDVVMNIAG   87 (272)
T ss_pred             CCEEEECCC
Confidence            688887654

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.45  E-value=3.7e-07  Score=71.77  Aligned_cols=67  Identities=19%  Similarity=0.125  Sum_probs=50.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      |+++||||||++|. +++.|.++|++|.+++|+...  .......+.  ..+..+.+|++|.+++.++++++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~--~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~   69 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVK--LENVKRESTTPESITPLPLDYHDDDALKLAIKST   69 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHH--HHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            57999999988775 999999999999999987421  111111122  45677889999999998888754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.44  E-value=7.1e-07  Score=72.55  Aligned_cols=75  Identities=16%  Similarity=0.166  Sum_probs=55.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      ++|||++|+||+++++.|+++|++|+++.|+..... ....+.+.   ..+.++.+|++|.+++.+++++       +|.
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGA-EEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHH-HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            589999999999999999999999999988752211 11111222   3467889999999998887765       588


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++.+.
T Consensus        80 vi~~ag   85 (239)
T TIGR01830        80 LVNNAG   85 (239)
T ss_pred             EEECCC
Confidence            777544

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.44  E-value=8.7e-07  Score=72.66  Aligned_cols=79  Identities=10%  Similarity=0.066  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      .++++||||+|+||+.+++.|+++|+.|+++.|+..... ..+........+..+.+|++|.+++.++++.       +|
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLN   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999988752211 0111111123567789999999888766654       58


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      .+++.+.
T Consensus        85 ~vi~~ag   91 (253)
T PRK08217         85 GLINNAG   91 (253)
T ss_pred             EEEECCC
Confidence            8777543

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.43  E-value=1.2e-06  Score=74.70  Aligned_cols=78  Identities=15%  Similarity=0.055  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------~~   74 (231)
                      +++++||||+|+||++++++|+++|+.|++..|...... .+..+.+   ...+.++.+|++|.+++.++++      .+
T Consensus        12 ~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~-~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDA-SDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHH-HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999998887532111 1111222   2356778999999998887765      37


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        91 D~li~nAG   98 (306)
T PRK07792         91 DIVVNNAG   98 (306)
T ss_pred             CEEEECCC
Confidence            88777543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=98.43  E-value=1.1e-06  Score=72.53  Aligned_cols=78  Identities=9%  Similarity=0.052  Sum_probs=57.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|.+.|++|+++.|.... ...+.+......+..+++|++|.+++.++++.       +|+
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPT-ETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchH-HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999999999999887765321 11111222224567789999999998887763       688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++.+.
T Consensus        89 li~~Ag   94 (253)
T PRK08993         89 LVNNAG   94 (253)
T ss_pred             EEECCC
Confidence            776544

>PRK09242 tropinone reductase; Provisional

Probab=98.42  E-value=9e-07  Score=73.11  Aligned_cols=78  Identities=14%  Similarity=0.133  Sum_probs=58.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      .++++||||+|+||+++++.|.++|++|++++|+...  ..+....+    . ..+..+.+|+++.+++.++++.     
T Consensus         9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADA--LAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999997532  11111111    1 3566789999999887766653     


Q ss_pred             --CCEEEEcccC
Q 043777           74 --VDVRFIPSEY   83 (231)
Q Consensus        74 --~d~~f~ps~~   83 (231)
                        +|.+++.+..
T Consensus        87 g~id~li~~ag~   98 (257)
T PRK09242         87 DGLHILVNNAGG   98 (257)
T ss_pred             CCCCEEEECCCC
Confidence              6887776543

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.40  E-value=1.2e-06  Score=81.99  Aligned_cols=78  Identities=23%  Similarity=0.206  Sum_probs=60.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|++++|+...  ..+..+.+   ...+.++.+|++|.+++.++++       .
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  448 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEA--LDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH  448 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999997532  11111122   2457788999999999988876       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       449 id~li~~Ag~  458 (657)
T PRK07201        449 VDYLVNNAGR  458 (657)
T ss_pred             CCEEEECCCC
Confidence            7888876544

>PRK06125 short chain dehydrogenase; Provisional

Probab=98.40  E-value=1.4e-06  Score=72.06  Aligned_cols=76  Identities=17%  Similarity=0.062  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHcc---CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQ---VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~---~d~   76 (231)
                      .++++||||+|+||+++++.|+++|++|.+++|+...  ..+..+.+    ..++.++.+|++|++++.++++.   +|.
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADA--LEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            5789999999999999999999999999999987532  11111112    13567889999999998887764   687


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      +++..
T Consensus        85 lv~~a   89 (259)
T PRK06125         85 LVNNA   89 (259)
T ss_pred             EEECC
Confidence            77643

>PRK07831 short chain dehydrogenase; Provisional

Probab=98.39  E-value=1.8e-06  Score=71.60  Aligned_cols=79  Identities=20%  Similarity=0.093  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCC-hhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIG-RIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG-~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+| .||+++++.|+++|+.|++..|+..... ..+.++. +. ..+.++.+|+++.+++.++++       
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   96 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLG   96 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999997 7999999999999999998888643210 0111111 22 357788999999998887775       


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      .+|++++...
T Consensus        97 ~id~li~~ag  106 (262)
T PRK07831         97 RLDVLVNNAG  106 (262)
T ss_pred             CCCEEEECCC
Confidence            3688777554

>PLN02778 3,5-epimerase/4-reductase

Probab=98.38  E-value=1.1e-06  Score=74.57  Aligned_cols=57  Identities=21%  Similarity=0.158  Sum_probs=42.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps   81 (231)
                      .|+||||||+||||++++++|+++|++|+...+                       |+.|.+.+...++  ++|+++|.+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-----------------------~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-----------------------RLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-----------------------ccCCHHHHHHHHHhcCCCEEEECC
Confidence            589999999999999999999999998864322                       2334444555554  578888765


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus        66 a~   67 (298)
T PLN02778         66 GV   67 (298)
T ss_pred             cc
Confidence            43

>PRK07791 short chain dehydrogenase; Provisional

Probab=98.38  E-value=9.8e-07  Score=74.43  Aligned_cols=79  Identities=15%  Similarity=0.018  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-------chhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-------NFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-------~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      +++++||||+++||++++++|+++|+.|.++.|+...       ....+..+.+.   ..+.++.+|++|.+++.++++.
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   85 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDA   85 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence            5789999999999999999999999999988876410       11111122222   3466788999999988776643


Q ss_pred             -------CCEEEEccc
Q 043777           74 -------VDVRFIPSE   82 (231)
Q Consensus        74 -------~d~~f~ps~   82 (231)
                             +|+.++...
T Consensus        86 ~~~~~g~id~lv~nAG  101 (286)
T PRK07791         86 AVETFGGLDVLVNNAG  101 (286)
T ss_pred             HHHhcCCCCEEEECCC
Confidence                   677776544

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.38  E-value=1.2e-06  Score=71.99  Aligned_cols=80  Identities=14%  Similarity=-0.022  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCC--CHHHHHHHHc------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLE--DEKSLLEAVK------   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~--d~~~l~~al~------   72 (231)
                      +.++++||||+|+||.++++.|++.|++|++++|+..... ..+.+.... ..+.++.+|++  +.+++.++++      
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   90 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF   90 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999753211 011111222 35667788886  5555544332      


Q ss_pred             -cCCEEEEccc
Q 043777           73 -QVDVRFIPSE   82 (231)
Q Consensus        73 -~~d~~f~ps~   82 (231)
                       .+|.+++.+.
T Consensus        91 ~~id~vi~~Ag  101 (247)
T PRK08945         91 GRLDGVLHNAG  101 (247)
T ss_pred             CCCCEEEECCc
Confidence             4788887543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.37  E-value=5.8e-07  Score=76.37  Aligned_cols=32  Identities=19%  Similarity=0.382  Sum_probs=29.1

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|||||||||++|+++|++.|++++++.|+.
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~   33 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNL   33 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCC
Confidence            79999999999999999999999888777764

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.37  E-value=1.6e-06  Score=73.99  Aligned_cols=78  Identities=13%  Similarity=-0.014  Sum_probs=56.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC--------chh---hhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS--------NFN---FSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~~---~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      +++++||||+++||++++++|++.|+.|.++.|+...        ...   .+.+......+.++++|++|++++.++++
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   87 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE   87 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999997421        001   11111111345678999999998877665


Q ss_pred             c-------CCEEEEcc
Q 043777           73 Q-------VDVRFIPS   81 (231)
Q Consensus        73 ~-------~d~~f~ps   81 (231)
                      .       +|+.+...
T Consensus        88 ~~~~~~g~iDilVnnA  103 (305)
T PRK08303         88 RIDREQGRLDILVNDI  103 (305)
T ss_pred             HHHHHcCCccEEEECC
Confidence            3       57666544

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.36  E-value=1.6e-06  Score=70.61  Aligned_cols=71  Identities=20%  Similarity=0.242  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCH-HHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE-KSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~l~~al~~~d~~f~ps~   82 (231)
                      .++++||||+|+||++++++|+++|++|+++.|+...        ....++..+.+|++++ +.+.+.+..+|++++...
T Consensus         5 ~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag   76 (235)
T PRK06550          5 TKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP--------DLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAG   76 (235)
T ss_pred             CCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccc--------ccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCC
Confidence            4789999999999999999999999999999887531        1124577889999987 444455556898877543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.36  E-value=9.3e-07  Score=72.12  Aligned_cols=73  Identities=16%  Similarity=0.039  Sum_probs=53.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      |+||||+|+||.++++.|.++|++|.++.|...... .+....+   ..++.++.+|++|.+++.++++.       +|.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDA-ESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHH-HHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999998887643211 1112222   24577899999999998877654       466


Q ss_pred             EEEc
Q 043777           77 RFIP   80 (231)
Q Consensus        77 ~f~p   80 (231)
                      .++.
T Consensus        80 li~~   83 (239)
T TIGR01831        80 VVLN   83 (239)
T ss_pred             EEEC
Confidence            6553

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=98.36  E-value=2.5e-06  Score=69.44  Aligned_cols=70  Identities=21%  Similarity=0.182  Sum_probs=51.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc---cCCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK---QVDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~---~~d~~f   78 (231)
                      |+++||||+|+||++++++|+++|  ..+....|+...        ... ..+.++++|++|.+++.++.+   ++|+++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--------ccccCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            589999999999999999999986  445444554321        122 567789999999998776544   578877


Q ss_pred             Eccc
Q 043777           79 IPSE   82 (231)
Q Consensus        79 ~ps~   82 (231)
                      +.+.
T Consensus        73 ~~aG   76 (235)
T PRK09009         73 NCVG   76 (235)
T ss_pred             ECCc
Confidence            6443

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.35  E-value=1e-06  Score=74.65  Aligned_cols=77  Identities=21%  Similarity=0.174  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||+|+||+++++.|.++|++|.+++|+...  ..+..+.+.  ..+..+.+|++|.+++.++++.       +
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE--LAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999987421  111122222  2344566999999988777653       6


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        87 d~vI~nAG   94 (296)
T PRK05872         87 DVVVANAG   94 (296)
T ss_pred             CEEEECCC
Confidence            87776543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.35  E-value=1.5e-06  Score=72.13  Aligned_cols=78  Identities=8%  Similarity=-0.017  Sum_probs=56.1

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc------
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      .++++||||+  ++||++++++|+++|++|++..|+..... ..+..+... .++..+.+|++|++++.++++.      
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG   86 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence            5789999997  89999999999999999998887532111 112222222 4567889999999998777653      


Q ss_pred             -CCEEEEcc
Q 043777           74 -VDVRFIPS   81 (231)
Q Consensus        74 -~d~~f~ps   81 (231)
                       +|..++..
T Consensus        87 ~ld~lv~na   95 (257)
T PRK08594         87 VIHGVAHCI   95 (257)
T ss_pred             CccEEEECc
Confidence             57666543

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.35  E-value=3.6e-06  Score=70.42  Aligned_cols=81  Identities=21%  Similarity=0.110  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-h-hhhhhhhcC-CcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-N-FSLLRVFHS-GVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~-~~~~~~~~~-~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +|.|+|||||.+||.+++.+|.++|..+..+.|....-. . .++.+.+.. .+.++++|++|.+++.++++       +
T Consensus        12 ~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~   91 (282)
T KOG1205|consen   12 GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGR   91 (282)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCC
Confidence            689999999999999999999999998887777653211 1 222223333 48889999999999987663       4


Q ss_pred             CCEEEEcccCC
Q 043777           74 VDVRFIPSEYG   84 (231)
Q Consensus        74 ~d~~f~ps~~g   84 (231)
                      +|+......++
T Consensus        92 vDvLVNNAG~~  102 (282)
T KOG1205|consen   92 VDVLVNNAGIS  102 (282)
T ss_pred             CCEEEecCccc
Confidence            77766554444

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.34  E-value=6.3e-06  Score=68.89  Aligned_cols=33  Identities=24%  Similarity=0.286  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|||||++|++|..|++.|. .+++|+.++|..
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~   33 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE   33 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc
Confidence            459999999999999999998 678999998865

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.33  E-value=1.8e-06  Score=71.65  Aligned_cols=79  Identities=15%  Similarity=0.072  Sum_probs=56.9

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||  +++||.+++++|+++|+.|++..|+.......+....+...+..+.+|++|++++.++++.       +
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   86 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGL   86 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999  8999999999999999999998876421111111122224567889999999988776643       6


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |+.+....
T Consensus        87 D~li~nAG   94 (256)
T PRK07889         87 DGVVHSIG   94 (256)
T ss_pred             cEEEEccc
Confidence            77666443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=98.33  E-value=1.2e-06  Score=74.87  Aligned_cols=77  Identities=17%  Similarity=0.101  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      +++++||||+++||++++++|+++| +.|++++|+...  ..+....+.   ..+.++.+|++|.+++.++++.      
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK--AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH--HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999 999999987532  111112222   3466788999999988776643      


Q ss_pred             -CCEEEEccc
Q 043777           74 -VDVRFIPSE   82 (231)
Q Consensus        74 -~d~~f~ps~   82 (231)
                       +|+.++...
T Consensus        81 ~iD~lI~nAG   90 (314)
T TIGR01289        81 PLDALVCNAA   90 (314)
T ss_pred             CCCEEEECCC
Confidence             677666443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07069 short chain dehydrogenase; Validated

Probab=98.33  E-value=1.8e-06  Score=70.81  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=54.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-----CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-----SGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++||||+|+||+++++.|+++|++|+++.|+..... .+..+.+.     ..+..+.+|++|.+++.++++       .
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGL-DAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHH-HHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            4899999999999999999999999999998732111 11111221     123457899999999877765       3


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        80 id~vi~~ag   88 (251)
T PRK07069         80 LSVLVNNAG   88 (251)
T ss_pred             ccEEEECCC
Confidence            688777543

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=98.32  E-value=2.3e-06  Score=80.59  Aligned_cols=78  Identities=17%  Similarity=0.104  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHc------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      .++++||||+|+||++++++|+++|+.|++++|+... . ......+    . ..+..+.+|++|.+++.++++      
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~-~-~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEA-A-EAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999987532 1 1111111    2 246678999999999988876      


Q ss_pred             -cCCEEEEcccC
Q 043777           73 -QVDVRFIPSEY   83 (231)
Q Consensus        73 -~~d~~f~ps~~   83 (231)
                       ++|++++....
T Consensus       492 g~iDilV~nAG~  503 (676)
T TIGR02632       492 GGVDIVVNNAGI  503 (676)
T ss_pred             CCCcEEEECCCC
Confidence             47887775543

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.32  E-value=2.1e-06  Score=71.63  Aligned_cols=76  Identities=12%  Similarity=0.046  Sum_probs=55.4

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      +++++||||++  +||++++++|+++|+.|.+..|+...   .+..+.+.   ..+..+.+|++|++++.++++.     
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL---KGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhH---HHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            57899999985  89999999999999999888876311   11112221   3456788999999998877753     


Q ss_pred             --CCEEEEccc
Q 043777           74 --VDVRFIPSE   82 (231)
Q Consensus        74 --~d~~f~ps~   82 (231)
                        +|..++...
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence              577666543

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.32  E-value=2.9e-06  Score=69.33  Aligned_cols=77  Identities=16%  Similarity=0.106  Sum_probs=53.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---c-CCcEEEEEcCCC--HHHHHHHH------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---H-SGVFDYWGLLED--EKSLLEAV------   71 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~-~~v~~~~~D~~d--~~~l~~al------   71 (231)
                      +++++||||+|+||+++++.|+++|++|++++|+....  .+....+   . ..+..+.+|+++  .+++.+++      
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL--EKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH--HHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999976321  1111111   1 345678899875  33444333      


Q ss_pred             --ccCCEEEEccc
Q 043777           72 --KQVDVRFIPSE   82 (231)
Q Consensus        72 --~~~d~~f~ps~   82 (231)
                        ..+|.+++...
T Consensus        84 ~~~~id~vi~~ag   96 (239)
T PRK08703         84 TQGKLDGIVHCAG   96 (239)
T ss_pred             hCCCCCEEEEecc
Confidence              34688776543

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.31  E-value=2e-06  Score=70.13  Aligned_cols=78  Identities=13%  Similarity=0.073  Sum_probs=56.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--------~~   74 (231)
                      +++++||||++.||++++++|.++|+.|.+..|+.+... ..+.+......+..+.+|++|++++.++++        .+
T Consensus         5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   84 (227)
T PRK08862          5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAP   84 (227)
T ss_pred             CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999999999988753210 111111212346677899999998876653        46


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |+.++..
T Consensus        85 D~li~na   91 (227)
T PRK08862         85 DVLVNNW   91 (227)
T ss_pred             CEEEECC
Confidence            7777654

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.30  E-value=3.9e-06  Score=69.34  Aligned_cols=79  Identities=16%  Similarity=-0.005  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCC--------ch-hhhhhhhh---cCCcEEEEEcCCCHHHHHH
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSAS--------NF-NFSLLRVF---HSGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~-~~~~~~~~---~~~v~~~~~D~~d~~~l~~   69 (231)
                      +++++||||+|  +||.+++++|+++|++|+++.|+...        .. .......+   ...+.++.+|+++.+++..
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   84 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR   84 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            46899999995  79999999999999999999887221        00 00011111   2357788999999998877


Q ss_pred             HHcc-------CCEEEEccc
Q 043777           70 AVKQ-------VDVRFIPSE   82 (231)
Q Consensus        70 al~~-------~d~~f~ps~   82 (231)
                      +++.       +|++++...
T Consensus        85 ~~~~~~~~~g~id~vi~~ag  104 (256)
T PRK12748         85 VFYAVSERLGDPSILINNAA  104 (256)
T ss_pred             HHHHHHHhCCCCCEEEECCC
Confidence            6653       688777543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.30  E-value=1.1e-06  Score=67.69  Aligned_cols=76  Identities=20%  Similarity=0.197  Sum_probs=54.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      |+++||||+|.||+.++++|+++| ..|.++.|+.......+....+.   ..+.++++|+++.+++.++++.       
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999995 56777777711101122222222   5677889999999998877764       


Q ss_pred             CCEEEEc
Q 043777           74 VDVRFIP   80 (231)
Q Consensus        74 ~d~~f~p   80 (231)
                      +|++++.
T Consensus        81 ld~li~~   87 (167)
T PF00106_consen   81 LDILINN   87 (167)
T ss_dssp             ESEEEEE
T ss_pred             ccccccc
Confidence            5666653

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.29  E-value=2.1e-06  Score=71.90  Aligned_cols=79  Identities=14%  Similarity=0.069  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHcc------
Q 043777            3 GKSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         3 ~~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      +++.++||||++  +||+.++++|+++|+.|.+..|+...... .+..+.. .....+++|++|.+++.++++.      
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL-GSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc-CCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            467899999996  99999999999999999998886321000 1111111 2234678999999988776653      


Q ss_pred             -CCEEEEccc
Q 043777           74 -VDVRFIPSE   82 (231)
Q Consensus        74 -~d~~f~ps~   82 (231)
                       +|+.+....
T Consensus        85 ~iD~lVnnAG   94 (271)
T PRK06505         85 KLDFVVHAIG   94 (271)
T ss_pred             CCCEEEECCc
Confidence             577665443

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.29  E-value=1.9e-06  Score=69.85  Aligned_cols=73  Identities=19%  Similarity=0.121  Sum_probs=55.9

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHcc---CCEEEEccc
Q 043777            8 LVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIPSE   82 (231)
Q Consensus         8 lVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~~---~d~~f~ps~   82 (231)
                      +||||+|+||++++++|+++|++|+++.|+...  .......+  ..++.++.+|++|.+++.++++.   +|..++...
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDR--LAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            589999999999999999999999999997421  11111122  24577889999999999998875   687776543

>PRK06940 short chain dehydrogenase; Provisional

Probab=98.28  E-value=3.9e-06  Score=70.37  Aligned_cols=76  Identities=20%  Similarity=0.104  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------~   74 (231)
                      ++.++|||| |+||++++++|. +|++|++++|+...  ..+..+.+.   ..+.++.+|++|.+++.++++.      +
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEEN--LEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHH--HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            478999998 799999999996 89999999987431  111122222   3467789999999998887753      6


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        78 d~li~nAG~   86 (275)
T PRK06940         78 TGLVHTAGV   86 (275)
T ss_pred             CEEEECCCc
Confidence            777765543

>PRK05599 hypothetical protein; Provisional

Probab=98.27  E-value=2.2e-06  Score=70.57  Aligned_cols=73  Identities=16%  Similarity=0.144  Sum_probs=53.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      |+++||||+++||++++++|. +|+.|.+++|+...  ..+..+.+.    ..+.++.+|++|.+++.++++.       
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEA--AQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHH--HHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999998 59999999987532  111112221    2367889999999988776543       


Q ss_pred             CCEEEEc
Q 043777           74 VDVRFIP   80 (231)
Q Consensus        74 ~d~~f~p   80 (231)
                      +|+.++.
T Consensus        78 id~lv~n   84 (246)
T PRK05599         78 ISLAVVA   84 (246)
T ss_pred             CCEEEEe
Confidence            5766653

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.27  E-value=5.4e-06  Score=65.98  Aligned_cols=80  Identities=19%  Similarity=0.123  Sum_probs=61.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .++++|+||+|.+|+.+++.|.+.|++|+++.|+...  ..+..+.+.  .+..+..+|..+.+++.++++++|+++...
T Consensus        28 ~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLER--AQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            5789999999999999999999999999999987421  111112221  245667789999999999999999988766


Q ss_pred             cCCC
Q 043777           82 EYGA   85 (231)
Q Consensus        82 ~~g~   85 (231)
                      ..|.
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            5554

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06484 short chain dehydrogenase; Validated

Probab=98.25  E-value=4.5e-06  Score=76.11  Aligned_cols=77  Identities=19%  Similarity=0.183  Sum_probs=58.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|+...  ..+..+.....+..+.+|++|++++.++++.       +|+
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEG--AKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999987421  1111122224556789999999998877753       688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++.+.
T Consensus       347 li~nAg  352 (520)
T PRK06484        347 LVNNAG  352 (520)
T ss_pred             EEECCC
Confidence            777543

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.25  E-value=2.6e-06  Score=71.47  Aligned_cols=78  Identities=13%  Similarity=0.121  Sum_probs=55.2

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+  ++||+.++++|.++|+.|.+..|+...... .+....+... ..+.+|++|.+++.++++.       
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5899999997  799999999999999999988886321011 1111222222 5788999999988776653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|+.+....
T Consensus        84 iDilVnnAG   92 (274)
T PRK08415         84 IDFIVHSVA   92 (274)
T ss_pred             CCEEEECCc
Confidence            577666544

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.25  E-value=4e-06  Score=69.55  Aligned_cols=78  Identities=12%  Similarity=0.013  Sum_probs=55.2

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+  ++||++++++|+++|++|.+..|+...... .+..+.+ ..+.++.+|++|.+++.++++.       
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL-DAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh-ccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            5789999998  599999999999999999998886421110 1111111 2345788999999988776543       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|+.++...
T Consensus        89 ld~lv~nAg   97 (258)
T PRK07533         89 LDFLLHSIA   97 (258)
T ss_pred             CCEEEEcCc
Confidence            577666443

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.24  E-value=2.6e-06  Score=70.92  Aligned_cols=77  Identities=18%  Similarity=0.151  Sum_probs=52.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCCHHHH----HHHH-----
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLEDEKSL----LEAV-----   71 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d~~~l----~~al-----   71 (231)
                      +.++||||+|+||++++++|+++|++|.++.|+.... ..+..+.+.    ..+..+.+|++|.+++    .+++     
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAA-ASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHH-HHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            5799999999999999999999999999887653211 111112221    3355688999998754    3333     


Q ss_pred             --ccCCEEEEccc
Q 043777           72 --KQVDVRFIPSE   82 (231)
Q Consensus        72 --~~~d~~f~ps~   82 (231)
                        ..+|++++...
T Consensus        81 ~~g~iD~lv~nAG   93 (267)
T TIGR02685        81 AFGRCDVLVNNAS   93 (267)
T ss_pred             ccCCceEEEECCc
Confidence              24788776543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06484 short chain dehydrogenase; Validated

Probab=98.24  E-value=4.8e-06  Score=75.92  Aligned_cols=77  Identities=22%  Similarity=0.166  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+++||++++++|.++|++|.++.|+...  ..+....+...+..+.+|++|++++.++++.       +|+
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER--ARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999999999999999987531  1122222334567789999999998777654       677


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        83 li~nag   88 (520)
T PRK06484         83 LVNNAG   88 (520)
T ss_pred             EEECCC
Confidence            776543

>PRK06720 hypothetical protein; Provisional

Probab=98.24  E-value=4.5e-06  Score=65.09  Aligned_cols=77  Identities=13%  Similarity=0.038  Sum_probs=54.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      ++.++||||+|+||+.+++.|.+.|++|.++.|+..... ..+.+........++.+|+++.+++.++++       .+|
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iD   95 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRID   95 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999988643100 011111112345678999999998877654       256


Q ss_pred             EEEEc
Q 043777           76 VRFIP   80 (231)
Q Consensus        76 ~~f~p   80 (231)
                      ..++.
T Consensus        96 ilVnn  100 (169)
T PRK06720         96 MLFQN  100 (169)
T ss_pred             EEEEC
Confidence            65553

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.23  E-value=3.7e-06  Score=69.77  Aligned_cols=79  Identities=11%  Similarity=0.021  Sum_probs=55.6

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      +++++||||+  +.||++++++|.+.|++|.+..|+.......+.++++.   ..+.++.+|++|++++.++++.     
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKW   85 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHc
Confidence            5789999986  79999999999999999988776532111111122221   3456788999999998876653     


Q ss_pred             --CCEEEEccc
Q 043777           74 --VDVRFIPSE   82 (231)
Q Consensus        74 --~d~~f~ps~   82 (231)
                        +|+.++...
T Consensus        86 g~iD~lv~nag   96 (258)
T PRK07370         86 GKLDILVHCLA   96 (258)
T ss_pred             CCCCEEEEccc
Confidence              577665443

>PRK08324 short chain dehydrogenase; Validated

Probab=98.22  E-value=5.5e-06  Score=78.16  Aligned_cols=77  Identities=19%  Similarity=0.124  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      .++++||||+|+||+++++.|+++|+.|++++|+...  .......+.  .++.++.+|++|.+++.++++       ++
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~--~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEA--AEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHH--HHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999997532  111112222  367789999999999887776       47


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus       500 DvvI~~AG  507 (681)
T PRK08324        500 DIVVSNAG  507 (681)
T ss_pred             CEEEECCC
Confidence            88887554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.20  E-value=7.4e-06  Score=62.85  Aligned_cols=77  Identities=19%  Similarity=0.193  Sum_probs=53.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCch-hhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc------
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNF-NFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~-~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      ++++|+||+|++|.+++++|.++|+ .|.++.|+..... .....+.+   ..++.++.+|+++++++.+++..      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999996 5777777653211 11001222   24566788999999888877654      


Q ss_pred             -CCEEEEcc
Q 043777           74 -VDVRFIPS   81 (231)
Q Consensus        74 -~d~~f~ps   81 (231)
                       +|.+++..
T Consensus        81 ~id~li~~a   89 (180)
T smart00822       81 PLRGVIHAA   89 (180)
T ss_pred             CeeEEEEcc
Confidence             47666643

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.20  E-value=3.3e-06  Score=70.19  Aligned_cols=77  Identities=10%  Similarity=0.086  Sum_probs=54.8

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      +++++||||  +++||++++++|+++|++|++..|... .  .+.++++.   .....+++|++|++++.++++.     
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-L--EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-H--HHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            578999997  679999999999999999988776531 1  11122221   2345689999999998877653     


Q ss_pred             --CCEEEEcccC
Q 043777           74 --VDVRFIPSEY   83 (231)
Q Consensus        74 --~d~~f~ps~~   83 (231)
                        +|+.++.+..
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence              6776665433

>PRK07578 short chain dehydrogenase; Provisional

Probab=98.19  E-value=8.9e-06  Score=64.63  Aligned_cols=61  Identities=26%  Similarity=0.265  Sum_probs=51.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---cCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---QVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---~~d~~f~ps   81 (231)
                      |+++||||+|+||++++++|.++ ++|.++.|+..                .+.+|++|.+++.++++   ++|++++.+
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a   63 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSAA   63 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence            47999999999999999999999 89999888631                36789999999988887   478877755


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        64 g   64 (199)
T PRK07578         64 G   64 (199)
T ss_pred             C
Confidence            4

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.18  E-value=4.4e-06  Score=66.53  Aligned_cols=69  Identities=19%  Similarity=0.254  Sum_probs=54.7

Q ss_pred             CCCCCeEEEEcCC-ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777            1 MAGKSNVLVIGAI-GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         1 M~~~~~ilVtGat-G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      |+..++|+|||++ |+||.++++++.+.|+.|.+..|+.+.  .+++.  ...++..++.|+++++++......
T Consensus         4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~--M~~L~--~~~gl~~~kLDV~~~~~V~~v~~e   73 (289)
T KOG1209|consen    4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEP--MAQLA--IQFGLKPYKLDVSKPEEVVTVSGE   73 (289)
T ss_pred             ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccch--HhhHH--HhhCCeeEEeccCChHHHHHHHHH
Confidence            4456889999887 899999999999999999999998653  12221  126788999999999998776554

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.18  E-value=5.6e-06  Score=68.81  Aligned_cols=74  Identities=11%  Similarity=0.060  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      ++.++||||++  +||++++++|.++|+.|.+..|+...   .+.++.+.   .....+++|++|++++.++++.     
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~---~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVL---EKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHH---HHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            57899999997  89999999999999999888776311   11122221   1233568999999998877753     


Q ss_pred             --CCEEEEc
Q 043777           74 --VDVRFIP   80 (231)
Q Consensus        74 --~d~~f~p   80 (231)
                        +|+.+..
T Consensus        85 g~iDilVnn   93 (260)
T PRK06603         85 GSFDFLLHG   93 (260)
T ss_pred             CCccEEEEc
Confidence              5665553

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.18  E-value=7.1e-06  Score=64.60  Aligned_cols=69  Identities=22%  Similarity=0.245  Sum_probs=49.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      +++||||+|.+|..+++.|.+++. +++++.|+....+ ..+.++.+.   ..+.++.+|++|++++.++++.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~   75 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQL   75 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHH
Confidence            589999999999999999999984 6888888832211 122333443   44566789999999999999764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.17  E-value=5.1e-06  Score=69.58  Aligned_cols=78  Identities=13%  Similarity=0.083  Sum_probs=54.5

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhh-hhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNF-SLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~-~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+  ++||++++++|+++|++|++..|+....... +..+.+ .....+++|++|++++.++++.       
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   88 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL-GAFVAGHCDVTDEASIDAVFETLEKKWGK   88 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc-CCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999997  7999999999999999998887753110111 111111 2345689999999998876653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|+.++...
T Consensus        89 iD~lv~nAG   97 (272)
T PRK08159         89 LDFVVHAIG   97 (272)
T ss_pred             CcEEEECCc
Confidence            577665443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.16  E-value=9.5e-06  Score=70.80  Aligned_cols=72  Identities=19%  Similarity=0.183  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|+|+|.|| |+||+.++..|.++| .+|++.+|+...   ...+.... .+++.+++|..|.+++.+++++.|+++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~---~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn   74 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEK---CARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN   74 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHH---HHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence            368999999 999999999999999 899999998532   21121222 5789999999999999999999998664

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.16  E-value=1.4e-05  Score=71.69  Aligned_cols=77  Identities=14%  Similarity=0.016  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||+.+++.|.++|++|+++.|+.......+....  .+...+.+|++|.+++.++++       .+|+
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR--VGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH--cCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            5789999999999999999999999999999885321111111111  345678999999998877665       3688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus       288 vi~~AG  293 (450)
T PRK08261        288 VVHNAG  293 (450)
T ss_pred             EEECCC
Confidence            887554

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.15  E-value=3.5e-06  Score=71.24  Aligned_cols=55  Identities=15%  Similarity=0.155  Sum_probs=45.1

Q ss_pred             EEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEcc
Q 043777            8 LVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPS   81 (231)
Q Consensus         8 lVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps   81 (231)
                      ||||||||||++|++.|+++|+.|+++.+..                   .+|++|.+++.++++.  +|++++-.
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~-------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK-------------------ELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc-------------------cCCCCCHHHHHHHHhccCCCEEEEee
Confidence            6999999999999999999999887654321                   3699999999998875  68887754

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.15  E-value=4.4e-06  Score=70.04  Aligned_cols=74  Identities=19%  Similarity=0.183  Sum_probs=56.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhhhhhcCCcEEEEEcCCCHH----HHHHHHccCCEEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLLRVFHSGVFDYWGLLEDEK----SLLEAVKQVDVRFI   79 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~~~~~~~v~~~~~D~~d~~----~l~~al~~~d~~f~   79 (231)
                      =.+|||||.+||++.+++|.++|.+|++++|..++ +. +.+..+.....++++..|+++.+    .+.+.+.+.|+-++
T Consensus        51 WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgIL  130 (312)
T KOG1014|consen   51 WAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGIL  130 (312)
T ss_pred             EEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEE
Confidence            47899999999999999999999999999998764 22 23333333355778889998765    47777778887443

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.14  E-value=1.1e-05  Score=69.19  Aligned_cols=80  Identities=15%  Similarity=0.118  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhh-hhc-CCcEEEEEcCCC--HHH---HHHHHccCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLR-VFH-SGVFDYWGLLED--EKS---LLEAVKQVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~-~~~-~~v~~~~~D~~d--~~~---l~~al~~~d   75 (231)
                      ++.++||||||+||++++++|.++|++|.+++|+...-. ..+.+. ... ..+..+.+|+++  .+.   +.+.+.+.|
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            478999999999999999999999999999999753210 011111 111 245667899985  333   334444444


Q ss_pred             --EEEEcccC
Q 043777           76 --VRFIPSEY   83 (231)
Q Consensus        76 --~~f~ps~~   83 (231)
                        +.+..+..
T Consensus       133 idilVnnAG~  142 (320)
T PLN02780        133 VGVLINNVGV  142 (320)
T ss_pred             ccEEEEecCc
Confidence              66654443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.10  E-value=9.6e-06  Score=64.23  Aligned_cols=66  Identities=18%  Similarity=0.249  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      +-+||||||+.+||..++++|++.|.+|++..|+...   -+......+.+....||+.|.++..+.++
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~---L~e~~~~~p~~~t~v~Dv~d~~~~~~lve   70 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEER---LAEAKAENPEIHTEVCDVADRDSRRELVE   70 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHH---HHHHHhcCcchheeeecccchhhHHHHHH
Confidence            4589999999999999999999999999999998531   11111111667778999999987655544

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.10  E-value=1.7e-05  Score=65.18  Aligned_cols=81  Identities=20%  Similarity=0.142  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCC-HHHHHHHHcc---
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLED-EKSLLEAVKQ---   73 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d-~~~l~~al~~---   73 (231)
                      .++++++||||+++||+.+++.|.++|+.|+++.|...............    ..+....+|+++ .+++..+++.   
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            34689999999999999999999999999888888753200001111111    246667899998 8776655543   


Q ss_pred             ----CCEEEEccc
Q 043777           74 ----VDVRFIPSE   82 (231)
Q Consensus        74 ----~d~~f~ps~   82 (231)
                          +|+.+..+.
T Consensus        83 ~~g~id~lvnnAg   95 (251)
T COG1028          83 EFGRIDILVNNAG   95 (251)
T ss_pred             HcCCCCEEEECCC
Confidence                675554433

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.08  E-value=8.7e-06  Score=67.32  Aligned_cols=66  Identities=20%  Similarity=0.081  Sum_probs=49.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHh----CCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHcc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIE----YGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~----~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      .++||||+|+||.+++++|.+    +|+.|.++.|+...  ..+..+.+    . ..+.++.+|++|.+++.++++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~   76 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEA--LRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKA   76 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHH--HHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHH
Confidence            589999999999999999997    79999999997532  11111122    1 3467789999999988877654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.06  E-value=1.3e-05  Score=66.71  Aligned_cols=78  Identities=9%  Similarity=0.020  Sum_probs=53.8

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||  ++.||++++++|+++|++|.+..|....... .+....+ .....+.+|++|++++.++++.       
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-GSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc-CCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            578999996  6799999999999999999887664211111 1111111 2234678999999998877753       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|+.+....
T Consensus        85 iD~lvnnAG   93 (260)
T PRK06997         85 LDGLVHSIG   93 (260)
T ss_pred             CcEEEEccc
Confidence            677666443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.06  E-value=1e-05  Score=69.17  Aligned_cols=70  Identities=17%  Similarity=0.066  Sum_probs=54.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      .+.++||||+.+||..++++|..+|.+|+...|+.....  +.+...... ..+.++++|+++.+++.+..+.
T Consensus        35 ~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~  107 (314)
T KOG1208|consen   35 GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE  107 (314)
T ss_pred             CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999863311  222222233 5677899999999998877664

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.99  E-value=3.2e-05  Score=63.98  Aligned_cols=78  Identities=14%  Similarity=0.050  Sum_probs=53.9

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCC--------ch-hhhhhhhhc---CCcEEEEEcCCCHHHHHH
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSAS--------NF-NFSLLRVFH---SGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~   69 (231)
                      +++++||||+|  +||++++++|+++|+.|++..|....        .. ..+....+.   ..+..+.+|++|.+++.+
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~   85 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE   85 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            57899999995  89999999999999998887542100        00 011111222   346678999999998877


Q ss_pred             HHcc-------CCEEEEcc
Q 043777           70 AVKQ-------VDVRFIPS   81 (231)
Q Consensus        70 al~~-------~d~~f~ps   81 (231)
                      ++..       +|++++..
T Consensus        86 ~~~~~~~~~g~id~li~~a  104 (256)
T PRK12859         86 LLNKVTEQLGYPHILVNNA  104 (256)
T ss_pred             HHHHHHHHcCCCcEEEECC
Confidence            7753       57777644

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.97  E-value=3.1e-05  Score=64.70  Aligned_cols=68  Identities=13%  Similarity=0.104  Sum_probs=52.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      +..||||||++++|+.++.++.++|..+.+.+.+....  .+..+...  ..+..+.||+++.+++.+..+.
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~--~etv~~~~~~g~~~~y~cdis~~eei~~~a~~  107 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN--EETVKEIRKIGEAKAYTCDISDREEIYRLAKK  107 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch--HHHHHHHHhcCceeEEEecCCCHHHHHHHHHH
Confidence            57899999999999999999999999888888876432  11222222  2578899999999988776654

>PLN00015 protochlorophyllide reductase

Probab=97.92  E-value=1.8e-05  Score=67.38  Aligned_cols=73  Identities=16%  Similarity=0.079  Sum_probs=53.6

Q ss_pred             EEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            8 LVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         8 lVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +||||+++||.+++++|+++| +.|++..|+...  ..+....+.   ..+.++.+|++|.+++.++++.       +|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLK--AERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHH--HHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            589999999999999999999 999998886431  111122222   3467789999999998777653       577


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        79 lInnAG   84 (308)
T PLN00015         79 LVCNAA   84 (308)
T ss_pred             EEECCC
Confidence            766543

>PRK09620 hypothetical protein; Provisional

Probab=97.90  E-value=5.3e-05  Score=61.93  Aligned_cols=75  Identities=16%  Similarity=0.213  Sum_probs=51.8

Q ss_pred             CCCeEEEEcCC----------------ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCC--cEEEEEcCCCH
Q 043777            3 GKSNVLVIGAI----------------GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSG--VFDYWGLLEDE   64 (231)
Q Consensus         3 ~~~~ilVtGat----------------G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~--v~~~~~D~~d~   64 (231)
                      .+++|+||+|.                ||+|++|+++|+++|++|+++.+..+..+     .....+  ...+.++....
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~-----~~~~~~~~~~~V~s~~d~~   76 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP-----NDINNQLELHPFEGIIDLQ   76 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC-----cccCCceeEEEEecHHHHH
Confidence            37899999885                99999999999999999999887542111     011112  23355544444


Q ss_pred             HHHHHHHc--cCCEEEEccc
Q 043777           65 KSLLEAVK--QVDVRFIPSE   82 (231)
Q Consensus        65 ~~l~~al~--~~d~~f~ps~   82 (231)
                      +.+.++++  ++|++||.+.
T Consensus        77 ~~l~~~~~~~~~D~VIH~AA   96 (229)
T PRK09620         77 DKMKSIITHEKVDAVIMAAA   96 (229)
T ss_pred             HHHHHHhcccCCCEEEECcc
Confidence            67888885  5899888543

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=97.89  E-value=3.9e-05  Score=61.65  Aligned_cols=72  Identities=18%  Similarity=0.139  Sum_probs=52.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhh--c-CCcEEEEEcCCCHHHHHHHHccC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVF--H-SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~--~-~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      |+ ++.++||||..+||.-++++|++. |.++.+..|+....+ .+.++..  . +++++++.|+++.+++.++.+++
T Consensus         1 Ms-pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a-~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V   76 (249)
T KOG1611|consen    1 MS-PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA-ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEV   76 (249)
T ss_pred             CC-CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh-hHHHHHhhccCCceEEEEEecccHHHHHHHHHHH
Confidence            77 567999999999999999999975 566666555521111 2222222  2 78999999999999988877653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.88  E-value=3.5e-05  Score=72.58  Aligned_cols=58  Identities=24%  Similarity=0.223  Sum_probs=44.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps   81 (231)
                      .|+||||||+||||++|++.|.++|++|...                       .+|++|.+.+...++  ++|++++.+
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-----------------------~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-----------------------KGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee-----------------------ccccccHHHHHHHHHhhCCCEEEECC
Confidence            5799999999999999999999999887311                       125667777777776  478888866


Q ss_pred             cCC
Q 043777           82 EYG   84 (231)
Q Consensus        82 ~~g   84 (231)
                      .+.
T Consensus       437 a~~  439 (668)
T PLN02260        437 GVT  439 (668)
T ss_pred             ccc
Confidence            543

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=97.88  E-value=3.4e-05  Score=62.09  Aligned_cols=70  Identities=20%  Similarity=0.153  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      .++++++||+.|+||..+.++|+++|..+.++.-+.. ++  .+++....+ ..+.++++|+++..++.++++.
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~E-n~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~k   76 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEE-NPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDK   76 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhh-CHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHH
Confidence            3689999999999999999999999977665544332 23  233333333 6677899999999999988876

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.79  E-value=7.4e-05  Score=64.32  Aligned_cols=79  Identities=22%  Similarity=0.159  Sum_probs=51.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-------CCEEEEEcCCCCc-hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-------HPKFALIRDSASN-FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-------~~v~~~~R~~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d   75 (231)
                      +.||+||||+|++|++++..|+..+       .++++++|+.... ..... ..+.........|+....++.++++++|
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~-~Dl~d~~~~~~~~~~~~~~~~~~l~~aD   80 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVV-MELQDCAFPLLKSVVATTDPEEAFKDVD   80 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccccccee-eehhhccccccCCceecCCHHHHhCCCC
Confidence            4689999999999999999999855       4799999865311 00000 0010111122235555567889999999


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus        81 iVI~tAG~   88 (325)
T cd01336          81 VAILVGAM   88 (325)
T ss_pred             EEEEeCCc
Confidence            99986543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.78  E-value=8.1e-05  Score=75.48  Aligned_cols=78  Identities=21%  Similarity=0.233  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC----CCEEEEEcCCCCch-hhhhhhh----------hcCCcEEEEEcCCC-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG----HPKFALIRDSASNF-NFSLLRV----------FHSGVFDYWGLLED-----   63 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g----~~v~~~~R~~~~~~-~~~~~~~----------~~~~v~~~~~D~~d-----   63 (231)
                      .++|+|||||||+|++++++|++++    +.|+++.|...... .......          ...++.++.+|+++     
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999887    78899999754311 1111110          01367889999974     


Q ss_pred             -HHHHHHHHccCCEEEEcc
Q 043777           64 -EKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus        64 -~~~l~~al~~~d~~f~ps   81 (231)
                       .+.+.++.+++|+++|..
T Consensus      1051 ~~~~~~~l~~~~d~iiH~A 1069 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNG 1069 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECC
Confidence             456777778899988843

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.78  E-value=0.00013  Score=59.69  Aligned_cols=67  Identities=18%  Similarity=0.083  Sum_probs=46.2

Q ss_pred             CCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCC--HHHHHHHHccCCEEEEcccCC
Q 043777           12 AIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLED--EKSLLEAVKQVDVRFIPSEYG   84 (231)
Q Consensus        12 atG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d--~~~l~~al~~~d~~f~ps~~g   84 (231)
                      +||++|++|+++|+++|++|+++.|+....      .....++.++.++-.+  .+.+.+.++++|++++.+...
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~------~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs   92 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKTAVK------PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS   92 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECccccc------CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence            489999999999999999999998764211      0001456666654322  245667777899988866543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.76  E-value=9.2e-05  Score=62.10  Aligned_cols=70  Identities=16%  Similarity=0.025  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc-hhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN-FNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~-~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~   72 (231)
                      ..|.++||||+.+||++++.+|.+.|..|++..|+...- ...+.+....   ..+..+.+|+++.+...++++
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~   80 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE   80 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence            367899999999999999999999999999999986431 1011111111   346778999998877655443

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.75  E-value=0.00017  Score=58.89  Aligned_cols=70  Identities=27%  Similarity=0.366  Sum_probs=56.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      |+++|.|+ |.+|+.+++.|.++||+|+++.++...     ..+...  ....++.+|-+|++.|.++ +.++|+....
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~-----~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~   73 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEER-----VEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAA   73 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHH-----HHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEe
Confidence            67899998 999999999999999999999998531     111122  5678899999999999998 7888886543

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.71  E-value=0.00022  Score=60.43  Aligned_cols=81  Identities=14%  Similarity=0.030  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCC-chhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSAS-NFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~-~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      .++++|+|| |++|++++.+|.+.|.. |+++.|+... ....+..+.+.   ..+.+..+|+.+.+++.+.++.+|+++
T Consensus       126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilI  204 (289)
T PRK12548        126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILV  204 (289)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEE
Confidence            568999999 89999999999999986 9999997521 01112222222   334566789988888888888899888


Q ss_pred             EcccCCC
Q 043777           79 IPSEYGA   85 (231)
Q Consensus        79 ~ps~~g~   85 (231)
                      .....|.
T Consensus       205 NaTp~Gm  211 (289)
T PRK12548        205 NATLVGM  211 (289)
T ss_pred             EeCCCCC
Confidence            7655554

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.66  E-value=0.00016  Score=58.94  Aligned_cols=70  Identities=20%  Similarity=0.269  Sum_probs=53.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      +..||||-||+-|+++++-|+..||+|+.+.|+.+. +. +.+.+-.-    . .......+|++|...|.+.+..+
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            468999999999999999999999999999998765 21 11111100    1 33456789999999999888754

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.64  E-value=0.00036  Score=60.96  Aligned_cols=80  Identities=14%  Similarity=0.052  Sum_probs=54.2

Q ss_pred             CCeEEEEcCCChhHHH--HHHHHHhCCCCEEEEEcCCCC-c---------h---hhhhhhhhcCCcEEEEEcCCCHHHHH
Q 043777            4 KSNVLVIGAIGRIGYH--FTRRSIEYGHPKFALIRDSAS-N---------F---NFSLLRVFHSGVFDYWGLLEDEKSLL   68 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~--i~~~L~~~g~~v~~~~R~~~~-~---------~---~~~~~~~~~~~v~~~~~D~~d~~~l~   68 (231)
                      +|++|||||++++|.+  ++++| ++|..+.++.+.... .         .   ..+..+.....+..+.+|+++.+++.
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~  119 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ  119 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            4799999999999999  89999 999998888753211 0         0   01111111123557899999998877


Q ss_pred             HHHcc-------CCEEEEcccCC
Q 043777           69 EAVKQ-------VDVRFIPSEYG   84 (231)
Q Consensus        69 ~al~~-------~d~~f~ps~~g   84 (231)
                      ++++.       +|.+.+...++
T Consensus       120 ~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        120 KVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHhcCCCCEEEECCccC
Confidence            66553       67776654444

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=97.62  E-value=0.00017  Score=56.86  Aligned_cols=68  Identities=12%  Similarity=0.022  Sum_probs=53.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      .+.++||||+.+||++|+..|.+.|+.|.+.+++... . .+....++  .+...+.||+.+..++...+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~-A-~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e   83 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAA-A-EATAGDLGGYGDHSAFSCDVSKAHDVQNTLEE   83 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhh-H-HHHHhhcCCCCccceeeeccCcHHHHHHHHHH
Confidence            4679999999999999999999999999999887642 1 12223333  3566789999999988877765

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.59  E-value=0.00052  Score=57.83  Aligned_cols=70  Identities=13%  Similarity=0.094  Sum_probs=53.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhh-c-CCcEEEEEcCCCHHHHHHHHccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVF-H-SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      .+|+|||++..+|..++..+..+|++|+++.|+..+ .+....++-. . ..+.+..+|+.|.+++..++++.
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l  106 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL  106 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence            489999999999999999999999999999998654 1111111111 1 33567889999999998888764

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.54  E-value=0.00022  Score=55.23  Aligned_cols=68  Identities=25%  Similarity=0.219  Sum_probs=52.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      .+.|+|||+.-+||+.++..|.+.|.+|+++.|++..  ..++.++-+.-+..+++|+.+.+.+.+++..
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~--L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~   74 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEAN--LLSLVKETPSLIIPIVGDLSAWEALFKLLVP   74 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHH--HHHHHhhCCcceeeeEecccHHHHHHHhhcc
Confidence            5789999998899999999999999999999998521  1222222224477889999998888887764

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.54  E-value=0.00032  Score=61.72  Aligned_cols=70  Identities=26%  Similarity=0.255  Sum_probs=51.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC-C-CEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYG-H-PKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g-~-~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |+|.|| |++|+.+++.|.+.+ + +|++.+|+...  ..+..+.+. .++..+.+|+.|.+++.++++++|++..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEK--AERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVIN   73 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHH--HHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHH--HHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEE
Confidence            789999 999999999999987 4 78999997531  112222213 7889999999999999999999999764

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.54  E-value=0.00045  Score=57.42  Aligned_cols=68  Identities=18%  Similarity=0.216  Sum_probs=49.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f   78 (231)
                      |+|+|+||||. |+.+++.|.++|++|++.+|.....   +.+..  .+...+..+..|.+++.+.+++  ++++.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~---~~~~~--~g~~~v~~g~l~~~~l~~~l~~~~i~~VI   70 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK---HLYPI--HQALTVHTGALDPQELREFLKRHSIDILV   70 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc---ccccc--cCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence            58999999999 9999999999999999999876421   11111  2333445566788889888876  55533

This enzyme was found to be a monomer by gel filtration.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.53  E-value=0.00048  Score=61.76  Aligned_cols=68  Identities=21%  Similarity=0.297  Sum_probs=55.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      |+|+|+|+ |.+|+++++.|.++|++|+++.|+...      .+.+.  .++.++.+|.++...+.++ ++++|.+++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~------~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~   71 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEER------LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIA   71 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHH------HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEE
Confidence            57999998 999999999999999999999886421      12221  4688999999999999988 888887655

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.48  E-value=0.00033  Score=54.15  Aligned_cols=71  Identities=15%  Similarity=0.077  Sum_probs=57.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d   75 (231)
                      ++-..+||||+.++|+..++.|.++|.+|.+++-+.++.  .+..+++..++.+...|+++++++..++..+.
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg--~~vakelg~~~vf~padvtsekdv~aala~ak   78 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKG--ADVAKELGGKVVFTPADVTSEKDVRAALAKAK   78 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc--hHHHHHhCCceEEeccccCcHHHHHHHHHHHH
Confidence            345689999999999999999999999999999877652  22234555778889999999999999887643

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.46  E-value=0.00035  Score=60.38  Aligned_cols=32  Identities=25%  Similarity=0.336  Sum_probs=28.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKF   32 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~   32 (231)
                      |+++++|+|+||||++|+.+++.|.+.+|++.
T Consensus         1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~   32 (336)
T PRK05671          1 MSQPLDIAVVGATGTVGEALVQILEERDFPVG   32 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhhCCCCce
Confidence            77778999999999999999999998877654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.45  E-value=0.00016  Score=63.44  Aligned_cols=38  Identities=32%  Similarity=0.547  Sum_probs=34.7

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      .+.++|+|+||||.+|+.+++.|+++|+.|.++.|+..
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~  114 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQ  114 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChh
Confidence            34678999999999999999999999999999999864

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.45  E-value=0.00062  Score=60.19  Aligned_cols=69  Identities=20%  Similarity=0.267  Sum_probs=52.6

Q ss_pred             CCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH
Q 043777            4 KSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL   67 (231)
Q Consensus         4 ~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l   67 (231)
                      +++++||||                +|.+|.+++++|.++|++|+++.++.+.        ....+  +..+|+++.+++
T Consensus       188 gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~--------~~~~~--~~~~dv~~~~~~  257 (399)
T PRK05579        188 GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL--------PTPAG--VKRIDVESAQEM  257 (399)
T ss_pred             CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc--------cCCCC--cEEEccCCHHHH
Confidence            689999999                8999999999999999999999886421        01122  346799998888


Q ss_pred             HHHHc----cCCEEEEccc
Q 043777           68 LEAVK----QVDVRFIPSE   82 (231)
Q Consensus        68 ~~al~----~~d~~f~ps~   82 (231)
                      .+++.    .+|+.+..+.
T Consensus       258 ~~~v~~~~~~~DilI~~Aa  276 (399)
T PRK05579        258 LDAVLAALPQADIFIMAAA  276 (399)
T ss_pred             HHHHHHhcCCCCEEEEccc
Confidence            77775    3677766543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.41  E-value=0.00052  Score=53.33  Aligned_cols=71  Identities=18%  Similarity=0.142  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +|..+|.||||-.|+.+++++++++  -.|+++.|+....+      +-...+.....|+...+++...+++.|+.|..
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~------at~k~v~q~~vDf~Kl~~~a~~~qg~dV~Fca   90 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP------ATDKVVAQVEVDFSKLSQLATNEQGPDVLFCA   90 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc------cccceeeeEEechHHHHHHHhhhcCCceEEEe
Confidence            6789999999999999999999998  36888888753222      11145566778999999999999999999974

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=97.40  E-value=0.00077  Score=60.20  Aligned_cols=78  Identities=18%  Similarity=0.285  Sum_probs=54.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC---CCEEEEEcCCCCch-h--------hhhhhhhc-------CCcEEEEEcCCCH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG---HPKFALIRDSASNF-N--------FSLLRVFH-------SGVFDYWGLLEDE   64 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g---~~v~~~~R~~~~~~-~--------~~~~~~~~-------~~v~~~~~D~~d~   64 (231)
                      +++|+|||||||+|+.+++.|++.-   ..+..+.|...... .        .++.+.+.       .++..+.||++++
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~   91 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP   91 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence            5899999999999999999999853   36788888764421 0        11111111       4566788998875


Q ss_pred             ------HHHHHHHccCCEEEEcc
Q 043777           65 ------KSLLEAVKQVDVRFIPS   81 (231)
Q Consensus        65 ------~~l~~al~~~d~~f~ps   81 (231)
                            +++....++++++++.+
T Consensus        92 ~LGis~~D~~~l~~eV~ivih~A  114 (467)
T KOG1221|consen   92 DLGISESDLRTLADEVNIVIHSA  114 (467)
T ss_pred             ccCCChHHHHHHHhcCCEEEEee
Confidence                  35666778899988754

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.40  E-value=0.00075  Score=58.34  Aligned_cols=65  Identities=22%  Similarity=0.199  Sum_probs=44.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCE---EEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPK---FALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v---~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ++|+|.||||++|+.+++.|.+.+|++   ..+.|..+..      +.+. .+..+...|+.+.     .++++|++|..
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g------~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A   70 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAG------KELSFKGKELKVEDLTTF-----DFSGVDIALFS   70 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC------CeeeeCCceeEEeeCCHH-----HHcCCCEEEEC
Confidence            589999999999999999999988764   7777764321      1111 3344555566432     34578887753

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.37  E-value=0.00031  Score=60.59  Aligned_cols=69  Identities=25%  Similarity=0.249  Sum_probs=46.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-C-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-G-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +++|+||||+|+||+.++++|.++ | ..++++.|+...   ..   .+..  ++..+++   ..+.+++.++|++++..
T Consensus       155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~r---l~---~La~--el~~~~i---~~l~~~l~~aDiVv~~t  223 (340)
T PRK14982        155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQER---LQ---ELQA--ELGGGKI---LSLEEALPEADIVVWVA  223 (340)
T ss_pred             CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHH---HH---HHHH--HhccccH---HhHHHHHccCCEEEECC
Confidence            579999999999999999999864 5 578888876321   11   1111  1112333   34678999999988765


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus       224 s~  225 (340)
T PRK14982        224 SM  225 (340)
T ss_pred             cC
Confidence            43

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.36  E-value=0.00028  Score=61.99  Aligned_cols=35  Identities=23%  Similarity=0.294  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~   38 (231)
                      +++|+|.||||++|+.+++.|.+. .+++..+.++.
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~   73 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADR   73 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChh
Confidence            579999999999999999999988 57888888764

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.33  E-value=0.00097  Score=48.16  Aligned_cols=67  Identities=28%  Similarity=0.373  Sum_probs=50.0

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      |+|+|. |.+|+.+++.|.+.+.+|+++.++..      ..+.+. .++.++.+|.+|++.+.++ +++++.+++.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~------~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~   69 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPE------RVEELREEGVEVIYGDATDPEVLERAGIEKADAVVIL   69 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHH------HHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcH------HHHHHHhcccccccccchhhhHHhhcCccccCEEEEc
Confidence            678898 89999999999997778999998742      122333 7789999999999999875 3456665543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.15  E-value=0.0017  Score=48.58  Aligned_cols=75  Identities=23%  Similarity=0.215  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +.++++|.|| |..|+.++..|.+.|.. |+++.|+...  ..++.+.+. ..+.+  .++   +++.+.+.++|+++..
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~r--a~~l~~~~~~~~~~~--~~~---~~~~~~~~~~DivI~a   82 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPER--AEALAEEFGGVNIEA--IPL---EDLEEALQEADIVINA   82 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHH--HHHHHHHHTGCSEEE--EEG---GGHCHHHHTESEEEE-
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHH--HHHHHHHcCccccce--eeH---HHHHHHHhhCCeEEEe
Confidence            3679999998 99999999999999977 9999997431  122223332 23333  334   3344788899999876


Q ss_pred             ccCCC
Q 043777           81 SEYGA   85 (231)
Q Consensus        81 s~~g~   85 (231)
                      ..-+.
T Consensus        83 T~~~~   87 (135)
T PF01488_consen   83 TPSGM   87 (135)
T ss_dssp             SSTTS
T ss_pred             cCCCC
Confidence            65554

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.12  E-value=0.0024  Score=52.43  Aligned_cols=79  Identities=15%  Similarity=0.140  Sum_probs=54.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-----EEEEEcCCCCch-h-hhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-----KFALIRDSASNF-N-FSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-----v~~~~R~~~~~~-~-~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      .|.++|||++.++|..|+.+|++...+     +.+.+|+.++.. . +++.+.++   -.++++.+|+++-.++.+|.++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            467899999999999999999986533     445677654311 1 12222222   3466789999999888777665


Q ss_pred             -------CCEEEEccc
Q 043777           74 -------VDVRFIPSE   82 (231)
Q Consensus        74 -------~d~~f~ps~   82 (231)
                             .|.+|+.+.
T Consensus        83 i~~rf~~ld~iylNAg   98 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAG   98 (341)
T ss_pred             HHHHhhhccEEEEccc
Confidence                   577777544

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=97.10  E-value=0.00075  Score=55.17  Aligned_cols=60  Identities=23%  Similarity=0.121  Sum_probs=45.2

Q ss_pred             cCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc
Q 043777           11 GAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus        11 Gat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~   72 (231)
                      |++  ++||+.++++|+++|++|++..|+...  ..+.++.+.  .+..++.+|+++++++.++++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~--~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~   64 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEK--LADALEELAKEYGAEVIQCDLSDEESVEALFD   64 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHH--HHHHHHHHHHHTTSEEEESCTTSHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHHHcCCceEeecCcchHHHHHHHH
Confidence            667  999999999999999999999998632  111122222  456689999999998877654

...

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.00  E-value=0.0038  Score=53.23  Aligned_cols=33  Identities=9%  Similarity=0.095  Sum_probs=29.9

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +|+++||||  +.+||.+++++|.++|+.|++ .|.
T Consensus         9 gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~   43 (303)
T PLN02730          9 GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW   43 (303)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence            688999999  799999999999999999887 554

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.90  E-value=0.0043  Score=55.61  Aligned_cols=73  Identities=21%  Similarity=0.228  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      +++|+|+|+ |.+|+.+++.|.+.|++|+++.+++..   .+.+.....++.++.+|.++.+.+.++ +++++.++..
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~---~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~  304 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPER---AEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIAL  304 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH---HHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence            578999998 999999999999999999999887521   111111114678899999999988654 4567877654

>PLN00106 malate dehydrogenase

Probab=96.87  E-value=0.0052  Score=52.83  Aligned_cols=75  Identities=17%  Similarity=0.031  Sum_probs=50.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +.||+|+||+|.||+.++..|..++.  ++.+++++. ....+  + .+. ........++.+.+++.++++++|++++.
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~a--~-Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVit   93 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGVA--A-DVSHINTPAQVRGFLGDDQLGDALKGADLVIIP   93 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCeeE--c-hhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEe
Confidence            46899999999999999999987663  688888765 21101  1 111 11122333555556688999999998885


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      ..
T Consensus        94 AG   95 (323)
T PLN00106         94 AG   95 (323)
T ss_pred             CC
Confidence            44

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.86  E-value=0.0042  Score=55.75  Aligned_cols=72  Identities=18%  Similarity=0.138  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      +++++|+|+++ +|..+++.|++.|++|++.+++... ...+....+. .++.++.+|..+     +...++|+++.+..
T Consensus         5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g   77 (450)
T PRK14106          5 GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEED-QLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG   77 (450)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchH-HHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence            68999999855 9999999999999999999886421 1111122333 577888888766     34567898877543

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=96.86  E-value=0.01  Score=48.38  Aligned_cols=63  Identities=21%  Similarity=0.094  Sum_probs=38.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      ..+|||||+-|++|..+++.|..+ |.+-++++--..  |.+    .....-.++..|+.|...+.+.+-
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~K--Pp~----~V~~~GPyIy~DILD~K~L~eIVV  107 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVK--PPA----NVTDVGPYIYLDILDQKSLEEIVV  107 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccC--Cch----hhcccCCchhhhhhccccHHHhhc
Confidence            468999999999999999988765 655555432111  100    111222355667777666655543

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.85  E-value=0.0087  Score=43.78  Aligned_cols=33  Identities=21%  Similarity=0.270  Sum_probs=25.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCC-CCEE-EEEcCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYG-HPKF-ALIRDS   38 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g-~~v~-~~~R~~   38 (231)
                      ||.|+||||++|+.+++.|.+.. .++. +..|+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            68999999999999999999854 3444 444444

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd00704 MDH Malate dehydrogenase

Probab=96.85  E-value=0.0075  Score=51.93  Aligned_cols=67  Identities=27%  Similarity=0.213  Sum_probs=44.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCH-----------HHH
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE-----------KSL   67 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~-----------~~l   67 (231)
                      ||+|+||+|.+|+.++..|...+.       ++++++++... +          .......|+.|.           ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~----------~~~g~~~Dl~d~~~~~~~~~~i~~~~   70 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K----------ALEGVVMELQDCAFPLLKGVVITTDP   70 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C----------ccceeeeehhhhcccccCCcEEecCh
Confidence            799999999999999999987662       37788776410 0          011112222222           345


Q ss_pred             HHHHccCCEEEEcccC
Q 043777           68 LEAVKQVDVRFIPSEY   83 (231)
Q Consensus        68 ~~al~~~d~~f~ps~~   83 (231)
                      .+.++++|++.+.+..
T Consensus        71 ~~~~~~aDiVVitAG~   86 (323)
T cd00704          71 EEAFKDVDVAILVGAF   86 (323)
T ss_pred             HHHhCCCCEEEEeCCC
Confidence            7899999998886543

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=96.80  E-value=0.003  Score=54.86  Aligned_cols=33  Identities=21%  Similarity=0.194  Sum_probs=28.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~   37 (231)
                      ++|+|+||||.+|+.+++.|.+. ++++..+.++
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~   36 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR   36 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence            79999999999999999999986 5777776664

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.80  E-value=0.0042  Score=53.81  Aligned_cols=64  Identities=22%  Similarity=0.296  Sum_probs=42.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEE---EEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKF---ALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~---~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +|+|.||||++|+.+++.|.+++|++.   .+.+..+..      +.+. .+......|+.     ...++++|++|..
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g------~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a   68 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG------RKVTFKGKELEVNEAK-----IESFEGIDIALFS   68 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC------CeeeeCCeeEEEEeCC-----hHHhcCCCEEEEC
Confidence            589999999999999999999888754   344554321      1112 34455566664     2234778887764

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PTZ00325 malate dehydrogenase; Provisional

Probab=96.79  E-value=0.005  Score=52.93  Aligned_cols=76  Identities=16%  Similarity=-0.025  Sum_probs=51.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +++||+|+|++|.||+.++..|...+  .++.++++... .  .+.+ .+. ........+.+|..++.++++++|++++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~-~--g~a~-Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVi   82 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGA-P--GVAA-DLSHIDTPAKVTGYADGELWEKALRGADLVLI   82 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCC-c--cccc-chhhcCcCceEEEecCCCchHHHhCCCCEEEE
Confidence            35699999999999999999988655  57888888321 1  1111 111 1112344566676677889999999887


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      ...
T Consensus        83 taG   85 (321)
T PTZ00325         83 CAG   85 (321)
T ss_pred             CCC
Confidence            543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.77  E-value=0.0028  Score=67.42  Aligned_cols=34  Identities=12%  Similarity=0.052  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~   37 (231)
                      .++++||||+|+||..++++|.++ |+.|+++.|+
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            578999999999999999999998 5899999997

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.76  E-value=0.0047  Score=49.45  Aligned_cols=66  Identities=15%  Similarity=0.081  Sum_probs=43.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |++.| ||+|.||+.++++|.+.||+|.+-.|+..... ....+.+...        -...+..++.+.+|++|+.
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~-~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKAL-AAAAAALGPL--------ITGGSNEDAAALADVVVLA   67 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHH-HHHHHhhccc--------cccCChHHHHhcCCEEEEe
Confidence            45555 66799999999999999999999877653211 1111121121        1233456788889998875

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.70  E-value=0.0056  Score=56.63  Aligned_cols=68  Identities=16%  Similarity=0.292  Sum_probs=53.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      .+++|+|+ |.+|+.+++.|.++|++++++++++.   +.   +... .++.++.+|.+|++.++++ ++++|.+++
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~---~~---~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv  487 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRT---RV---DELRERGIRAVLGNAANEEIMQLAHLDCARWLLL  487 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHH---HH---HHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEE
Confidence            46899998 99999999999999999999987642   12   2223 6889999999999988765 355776554

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.63  E-value=0.0031  Score=51.12  Aligned_cols=34  Identities=24%  Similarity=0.287  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|+||+|.+|+.++..|.+.|++|.+..|+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence            5799999999999999999999999999998875

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=96.62  E-value=0.0029  Score=54.27  Aligned_cols=70  Identities=23%  Similarity=0.160  Sum_probs=51.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHh----CCCCEEEEEcCCCCchhhhhhhhhc-------CCcEEEEEcCCCHHHHHHHHccC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIE----YGHPKFALIRDSASNFNFSLLRVFH-------SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~----~g~~v~~~~R~~~~~~~~~~~~~~~-------~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      -++|.|||||.|..+++++++    .+...-+..|+..+  ..+.++...       +...++.+|.+|++++.+..+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~K--L~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKK--LQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHH--HHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence            588999999999999999999    57777788887543  011111111       22337889999999999999987


Q ss_pred             CEE
Q 043777           75 DVR   77 (231)
Q Consensus        75 d~~   77 (231)
                      .++
T Consensus        85 ~vi   87 (423)
T KOG2733|consen   85 RVI   87 (423)
T ss_pred             EEE
Confidence            763

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.59  E-value=0.025  Score=43.56  Aligned_cols=62  Identities=23%  Similarity=0.240  Sum_probs=42.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|+|.++|- |..|+.+++.|+++|++|++..|+...   .   +.+. .++..       .++..++++++|+++.
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~---~---~~~~~~g~~~-------~~s~~e~~~~~dvvi~   63 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEK---A---EALAEAGAEV-------ADSPAEAAEQADVVIL   63 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHH---H---HHHHHTTEEE-------ESSHHHHHHHBSEEEE
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhh---h---hhhHHhhhhh-------hhhhhhHhhcccceEe
Confidence            358999997 999999999999999999999987421   1   2222 44222       2245566777888774

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.59  E-value=0.011  Score=50.02  Aligned_cols=68  Identities=18%  Similarity=0.077  Sum_probs=52.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-cCCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-HSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      .+-|+|||+=.+.|+.++++|.++|+.|.+-.-.+..  ..++.... .++...++.|+++++++.++.+-
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~g--ae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~   97 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEG--AESLRGETKSPRLRTLQLDVTKPESVKEAAQW   97 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCch--HHHHhhhhcCCcceeEeeccCCHHHHHHHHHH
Confidence            4679999999999999999999999999987744321  11222222 26778889999999999888763

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.55  E-value=0.013  Score=50.42  Aligned_cols=67  Identities=24%  Similarity=0.152  Sum_probs=45.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHH-----------HH
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK-----------SL   67 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~-----------~l   67 (231)
                      +|+|+||+|.+|+.++..|...+.       ++++++++....           .......|+.|..           ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------~a~g~~~Dl~d~~~~~~~~~~~~~~~   69 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------VLEGVVMELMDCAFPLLDGVVPTHDP   69 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------ccceeEeehhcccchhcCceeccCCh
Confidence            589999999999999999988653       478888754310           0111223333322           44


Q ss_pred             HHHHccCCEEEEcccC
Q 043777           68 LEAVKQVDVRFIPSEY   83 (231)
Q Consensus        68 ~~al~~~d~~f~ps~~   83 (231)
                      .+.++++|++++....
T Consensus        70 ~~~~~~aDiVVitAG~   85 (324)
T TIGR01758        70 AVAFTDVDVAILVGAF   85 (324)
T ss_pred             HHHhCCCCEEEEcCCC
Confidence            6788999998886544

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.44  E-value=0.011  Score=55.28  Aligned_cols=68  Identities=22%  Similarity=0.301  Sum_probs=54.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      ++|+|+|. |.+|+.+++.|.++|++++++++++.      ..+... .+..++.+|.++++.++++ +++++.+.+
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~------~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~  470 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDIS------AVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVI  470 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHH------HHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEE
Confidence            57999997 99999999999999999999998742      122233 6788999999999999876 456776554

>PRK05086 malate dehydrogenase; Provisional

Probab=96.42  E-value=0.011  Score=50.59  Aligned_cols=73  Identities=18%  Similarity=0.109  Sum_probs=45.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHh-C--CCCEEEEEcCCCCchhhhhhhhhcC-C-cEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIE-Y--GHPKFALIRDSASNFNFSLLRVFHS-G-VFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~-~--g~~v~~~~R~~~~~~~~~~~~~~~~-~-v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |||+|+||||.+|++++..|.. .  ++.+.++.|+....  ...+ .+.. + ...+.+  .+.+++.+.++++|++++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~--g~al-Dl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIi   75 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTP--GVAV-DLSHIPTAVKIKG--FSGEDPTPALEGADVVLI   75 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCc--ceeh-hhhcCCCCceEEE--eCCCCHHHHcCCCCEEEE
Confidence            6899999999999999988854 2  35677777764211  0001 1111 1 123333  234456678899999887


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      ...
T Consensus        76 taG   78 (312)
T PRK05086         76 SAG   78 (312)
T ss_pred             cCC
Confidence            543

>PRK05442 malate dehydrogenase; Provisional

Probab=96.40  E-value=0.018  Score=49.63  Aligned_cols=76  Identities=25%  Similarity=0.191  Sum_probs=47.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCc-h---hhhhhhhh-c--CCcEEEEEcCCCHHH
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASN-F---NFSLLRVF-H--SGVFDYWGLLEDEKS   66 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~-~---~~~~~~~~-~--~~v~~~~~D~~d~~~   66 (231)
                      |.+++||.|+||+|.+|+.++-.|+..+.       ++.+++++.... .   ..++.... .  ..+.+     +  ..
T Consensus         1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--~~   73 (326)
T PRK05442          1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--DD   73 (326)
T ss_pred             CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--cC
Confidence            78889999999999999999998887663       577777753210 1   11111110 1  11221     1  13


Q ss_pred             HHHHHccCCEEEEcccC
Q 043777           67 LLEAVKQVDVRFIPSEY   83 (231)
Q Consensus        67 l~~al~~~d~~f~ps~~   83 (231)
                      ..+.++++|++++....
T Consensus        74 ~y~~~~daDiVVitaG~   90 (326)
T PRK05442         74 PNVAFKDADVALLVGAR   90 (326)
T ss_pred             hHHHhCCCCEEEEeCCC
Confidence            35788999998886543

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.38  E-value=0.016  Score=56.94  Aligned_cols=72  Identities=22%  Similarity=0.077  Sum_probs=52.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CC-------------EEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HP-------------KFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~-------------v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~   69 (231)
                      +++|+|.|| |++|+.+++.|.+.. ++             |.+.+++..   .++.+.....++..+..|+.|.+++.+
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~---~a~~la~~~~~~~~v~lDv~D~e~L~~  644 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLK---DAKETVEGIENAEAVQLDVSDSESLLK  644 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHH---HHHHHHHhcCCCceEEeecCCHHHHHH
Confidence            568999998 999999999998753 33             555554431   121111111467789999999999999


Q ss_pred             HHccCCEEEE
Q 043777           70 AVKQVDVRFI   79 (231)
Q Consensus        70 al~~~d~~f~   79 (231)
                      +++++|++..
T Consensus       645 ~v~~~DaVIs  654 (1042)
T PLN02819        645 YVSQVDVVIS  654 (1042)
T ss_pred             hhcCCCEEEE
Confidence            9999999775

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.33  E-value=0.021  Score=49.66  Aligned_cols=29  Identities=21%  Similarity=0.423  Sum_probs=25.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPK   31 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v   31 (231)
                      ++++|+|.||||++|+.+++.|.+++|++
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~   34 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPY   34 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCc
Confidence            35799999999999999999999888753

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.31  E-value=0.019  Score=50.32  Aligned_cols=65  Identities=22%  Similarity=0.183  Sum_probs=50.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      ++|+|.|+ |++|+.++.++.+.|+.|.+++.+... + +.   .+ . -..+.+|+.|.+.+.+.++.+|++
T Consensus         3 ~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~-p-a~---~~-a-d~~~~~~~~D~~~l~~~a~~~dvi   67 (372)
T PRK06019          3 KTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDS-P-AA---QV-A-DEVIVADYDDVAALRELAEQCDVI   67 (372)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCC-c-hh---Hh-C-ceEEecCCCCHHHHHHHHhcCCEE
Confidence            58999998 899999999999999999999876431 1 11   11 1 135567999999999999999974

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.31  E-value=0.014  Score=54.74  Aligned_cols=68  Identities=21%  Similarity=0.257  Sum_probs=53.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      .+|+|+|. |.+|+.+++.|.++|++++++..++.      ..+... .+..++.+|.+|++.+.++ +++++.+.+
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~------~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv  470 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPD------HIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN  470 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHH------HHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEE
Confidence            57999998 99999999999999999999988742      122233 6789999999999988764 345666554

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.28  E-value=0.021  Score=45.11  Aligned_cols=69  Identities=16%  Similarity=0.220  Sum_probs=43.8

Q ss_pred             CCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH
Q 043777            4 KSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL   67 (231)
Q Consensus         4 ~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l   67 (231)
                      +++||||+|                ||..|.+|++++..+|++|+.+..+.+..        .+.++..+.  +...+++
T Consensus         3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~--------~p~~~~~i~--v~sa~em   72 (185)
T PF04127_consen    3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP--------PPPGVKVIR--VESAEEM   72 (185)
T ss_dssp             T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE---SSHHHH
T ss_pred             CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc--------ccccceEEE--ecchhhh
Confidence            578888865                79999999999999999999998874211        124555554  4455554


Q ss_pred             ----HHHHccCCEEEEccc
Q 043777           68 ----LEAVKQVDVRFIPSE   82 (231)
Q Consensus        68 ----~~al~~~d~~f~ps~   82 (231)
                          .+.++++|+.++.+.
T Consensus        73 ~~~~~~~~~~~Di~I~aAA   91 (185)
T PF04127_consen   73 LEAVKELLPSADIIIMAAA   91 (185)
T ss_dssp             HHHHHHHGGGGSEEEE-SB
T ss_pred             hhhhccccCcceeEEEecc
Confidence                444556898887543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.23  E-value=0.028  Score=37.73  Aligned_cols=34  Identities=29%  Similarity=0.408  Sum_probs=30.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS   40 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~   40 (231)
                      +++|.|| |++|-.++..|.+.|.+|+++.|.+..
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            5889998 999999999999999999999997643

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=96.22  E-value=0.025  Score=49.92  Aligned_cols=67  Identities=13%  Similarity=0.167  Sum_probs=48.4

Q ss_pred             CCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH
Q 043777            4 KSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL   67 (231)
Q Consensus         4 ~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l   67 (231)
                      +++++||||                ||.+|..++++|..+|++|+++.++...        ..+.+  +...|+.+.+++
T Consensus       185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~--------~~~~~--~~~~~v~~~~~~  254 (390)
T TIGR00521       185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSL--------LTPPG--VKSIKVSTAEEM  254 (390)
T ss_pred             CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCcc--------CCCCC--cEEEEeccHHHH
Confidence            578999998                4679999999999999999998876531        11122  245788888887


Q ss_pred             -HHHH----ccCCEEEEc
Q 043777           68 -LEAV----KQVDVRFIP   80 (231)
Q Consensus        68 -~~al----~~~d~~f~p   80 (231)
                       ..++    .++|+.+..
T Consensus       255 ~~~~~~~~~~~~D~~i~~  272 (390)
T TIGR00521       255 LEAALNELAKDFDIFISA  272 (390)
T ss_pred             HHHHHHhhcccCCEEEEc
Confidence             4444    246776654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.17  E-value=0.016  Score=49.59  Aligned_cols=72  Identities=22%  Similarity=0.183  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEE-----EEcCCCHHHHHHHHccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDY-----WGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~-----~~D~~d~~~l~~al~~~d~~f   78 (231)
                      +++|.|.|| |-.|.+|+..|.++||+|+++.|++..   .+.+..-..+.+++     ...+.-..++.++++++|.++
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~---~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv   76 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEI---VAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIV   76 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHH---HHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEE
Confidence            368999998 999999999999999999999997532   11111111122222     233444567899999999866


Q ss_pred             E
Q 043777           79 I   79 (231)
Q Consensus        79 ~   79 (231)
                      +
T Consensus        77 ~   77 (329)
T COG0240          77 I   77 (329)
T ss_pred             E
Confidence            4

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.15  E-value=0.0087  Score=52.10  Aligned_cols=37  Identities=27%  Similarity=0.301  Sum_probs=30.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      |+ +++|+|+||||++|+.+++.|.+... +++.+.++.
T Consensus         1 ~~-~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          1 MM-KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CC-CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            55 58999999999999999999997654 777774543

>PRK06849 hypothetical protein; Provisional

Probab=96.11  E-value=0.01  Score=52.26  Aligned_cols=38  Identities=24%  Similarity=0.207  Sum_probs=35.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |.++|+|||||++..+|..+++.|.+.|++|++++...
T Consensus         1 ~~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~   38 (389)
T PRK06849          1 MNTKKTVLITGARAPAALELARLFHNAGHTVILADSLK   38 (389)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            77789999999999999999999999999999988764

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.11  E-value=0.04  Score=44.14  Aligned_cols=34  Identities=15%  Similarity=0.366  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++|+|+|| |.+|...++.|++.|++|+++.+..
T Consensus        10 ~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718         10 NKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            689999998 9999999999999999999987653

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.08  E-value=0.043  Score=47.59  Aligned_cols=75  Identities=25%  Similarity=0.233  Sum_probs=51.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCC------------------chhh----hhhhhhcCCc--EEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSAS------------------NFNF----SLLRVFHSGV--FDYW   58 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~------------------~~~~----~~~~~~~~~v--~~~~   58 (231)
                      .++|+|.|+ |.+|+++++.|...|. .+++++++.-.                  .+|+    +.+..+.+.+  ..+.
T Consensus        24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~  102 (338)
T PRK12475         24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV  102 (338)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence            578999998 8899999999999996 68888876411                  0111    2222333333  4455


Q ss_pred             EcCCCHHHHHHHHccCCEEEEc
Q 043777           59 GLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus        59 ~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .|++ .+.+.++++++|+++..
T Consensus       103 ~~~~-~~~~~~~~~~~DlVid~  123 (338)
T PRK12475        103 TDVT-VEELEELVKEVDLIIDA  123 (338)
T ss_pred             ccCC-HHHHHHHhcCCCEEEEc
Confidence            6664 55788889999987754

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.07  E-value=0.013  Score=50.99  Aligned_cols=33  Identities=21%  Similarity=0.167  Sum_probs=26.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEE-EcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFAL-IRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~-~R~   37 (231)
                      |+|+|+||||++|+.+++.|.+. ++++..+ +++
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~   35 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSR   35 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccc
Confidence            57999999999999999999976 4667744 443

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.07  E-value=0.029  Score=47.13  Aligned_cols=36  Identities=19%  Similarity=0.210  Sum_probs=30.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC----CCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG----HPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g----~~v~~~~R~~   38 (231)
                      |+ .|+|.++|+ |.+|+.+++.|++.|    ++|++..|+.
T Consensus         1 ~~-~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~   40 (279)
T PRK07679          1 MS-IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSN   40 (279)
T ss_pred             CC-CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence            66 579999995 999999999999988    7788887754

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.02  E-value=0.031  Score=49.43  Aligned_cols=68  Identities=10%  Similarity=0.018  Sum_probs=51.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      +.+++|+|. |.+|+.+++.|.++|++++++..+..    .   .....+..++.+|.+|++.++++ +++++.+.+
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~----~---~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~  308 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL----E---HRLPDDADLIPGDSSDSAVLKKAGAARARAILA  308 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh----h---hhccCCCcEEEeCCCCHHHHHhcCcccCCEEEE
Confidence            457999997 88999999999999999988875421    1   12226788999999999988765 355676654

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=96.01  E-value=0.011  Score=48.29  Aligned_cols=60  Identities=12%  Similarity=0.095  Sum_probs=40.3

Q ss_pred             CCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCEEEEccc
Q 043777           12 AIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDVRFIPSE   82 (231)
Q Consensus        12 atG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~~f~ps~   82 (231)
                      +||++|++++++|.++|+.|+++.|....       ..  ..  ...+|+.+.+++.++++       .+|+.++.+.
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-------~~--~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRAL-------KP--EP--HPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhhc-------cc--cc--CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            48999999999999999999988764210       00  01  13468888776655433       4677766543

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.99  E-value=0.041  Score=44.20  Aligned_cols=66  Identities=14%  Similarity=0.167  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|+|.|| |.+|..-++.|++.|..|++++.+..  +   .+..+.  .++.++..++.. +    -+.+++.++..
T Consensus         9 gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~--~---~l~~l~~~~~i~~~~~~~~~-~----dl~~~~lVi~a   76 (205)
T TIGR01470         9 GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE--S---ELTLLAEQGGITWLARCFDA-D----ILEGAFLVIAA   76 (205)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC--H---HHHHHHHcCCEEEEeCCCCH-H----HhCCcEEEEEC
Confidence            679999998 99999999999999999999876542  1   112222  467888888762 2    25677777765

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.87  E-value=0.041  Score=38.14  Aligned_cols=64  Identities=25%  Similarity=0.343  Sum_probs=41.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCC---CCEEEE-EcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYG---HPKFAL-IRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g---~~v~~~-~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ||.++|+ |.+|+.|++.|++.|   ++|.+. .|++..  ..+..+.  .++.+...      +..++++.+|++|+.
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~--~~~~~~~--~~~~~~~~------~~~~~~~~advvila   68 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEK--AAELAKE--YGVQATAD------DNEEAAQEADVVILA   68 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHH--HHHHHHH--CTTEEESE------EHHHHHHHTSEEEE-
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHH--HHHHHHh--hccccccC------ChHHhhccCCEEEEE
Confidence            5788865 999999999999999   888865 665421  1111112  33333322      245666789998874

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK04148 hypothetical protein; Provisional

Probab=95.85  E-value=0.021  Score=42.63  Aligned_cols=65  Identities=12%  Similarity=0.220  Sum_probs=47.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      ++++++.|. | -|.+++..|.+.|++|++++.++..      .+... .++.++.+|+.+++-  +.-+++|.++
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~a------V~~a~~~~~~~v~dDlf~p~~--~~y~~a~liy   82 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKA------VEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIY   82 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHH------HHHHHHhCCeEEECcCCCCCH--HHHhcCCEEE
Confidence            468999997 6 7888999999999999999987521      12222 567899999987762  2345677665

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.78  E-value=0.042  Score=41.54  Aligned_cols=71  Identities=18%  Similarity=0.132  Sum_probs=45.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++++|+|+ |.+|+.+++.|.+.| +.|.++.|+...  ..+..+.+.  ...+..+..+.   .++++++|+++....
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~--~~~~~~~~~--~~~~~~~~~~~---~~~~~~~Dvvi~~~~   90 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEK--AKALAERFG--ELGIAIAYLDL---EELLAEADLIINTTP   90 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHH--HHHHHHHHh--hcccceeecch---hhccccCCEEEeCcC
Confidence            578999998 999999999999986 788888886421  111112221  11122233333   334788999887433

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.74  E-value=0.016  Score=49.35  Aligned_cols=34  Identities=12%  Similarity=0.072  Sum_probs=30.1

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +|+++||||+  .+||++++++|.++|++|++.+|.
T Consensus         8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            6789999995  899999999999999999887643

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=95.73  E-value=0.032  Score=48.06  Aligned_cols=77  Identities=19%  Similarity=0.114  Sum_probs=45.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCc-hhhhhhhhhcCCcEEE--EEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASN-FNFSLLRVFHSGVFDY--WGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~-~~~~~~~~~~~~v~~~--~~D~~d~~~l~~al~~   73 (231)
                      .+||.|+||+|.+|+.++..|+..|.       ++.+++++.... .+...+ .+......+  ...+.  ....+.+++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~-Dl~~~~~~~~~~~~i~--~~~~~~~~d   78 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAM-ELEDCAFPLLAEIVIT--DDPNVAFKD   78 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeeh-hhhhccccccCceEEe--cCcHHHhCC
Confidence            57999999999999999999998774       577887743221 111000 111000000  00111  123578899


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        79 aDivvitaG~   88 (322)
T cd01338          79 ADWALLVGAK   88 (322)
T ss_pred             CCEEEEeCCC
Confidence            9999886554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=95.72  E-value=0.028  Score=48.00  Aligned_cols=33  Identities=27%  Similarity=0.349  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|.|+ |.+|..++..|.+.|++|.++.|+.
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~   34 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDP   34 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence            58999997 9999999999999999999999864

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=95.65  E-value=0.069  Score=45.21  Aligned_cols=66  Identities=29%  Similarity=0.423  Sum_probs=47.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .++++|+|+ |.+|+.+++.|...|.+|++..|+...   ...  ....+...+     +.+.+.+.++++|+++..
T Consensus       151 gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~---~~~--~~~~g~~~~-----~~~~l~~~l~~aDiVint  216 (287)
T TIGR02853       151 GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSAD---LAR--ITEMGLIPF-----PLNKLEEKVAEIDIVINT  216 (287)
T ss_pred             CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHH---HHH--HHHCCCeee-----cHHHHHHHhccCCEEEEC
Confidence            578999998 899999999999999999999987421   111  111233221     345677888999998864

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.64  E-value=0.079  Score=46.64  Aligned_cols=68  Identities=15%  Similarity=0.148  Sum_probs=50.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~   79 (231)
                      +|+|+|+|+ |..|+.++.++.+.|+.|.+++.++.. +..    .+..  ..+..|..|.+.+.++++  ++|.++.
T Consensus        12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~-~~~----~~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~   81 (395)
T PRK09288         12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANA-PAM----QVAH--RSHVIDMLDGDALRAVIEREKPDYIVP   81 (395)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCC-chH----Hhhh--heEECCCCCHHHHHHHHHHhCCCEEEE
Confidence            568999997 899999999999999999988876531 100    0111  245678889999988888  6887654

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.59  E-value=0.018  Score=50.57  Aligned_cols=35  Identities=23%  Similarity=0.332  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|.||.|.+|+.++..|.+.|++|++.+|+.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999999998853

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.56  E-value=0.024  Score=48.78  Aligned_cols=37  Identities=27%  Similarity=0.286  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+..|+|.|.|+ |-+|..++..|.+.|++|+++.|+.
T Consensus         1 ~~~~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~   37 (328)
T PRK14618          1 MHHGMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRP   37 (328)
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            666789999987 9999999999999999999999964

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=95.55  E-value=0.06  Score=46.67  Aligned_cols=64  Identities=19%  Similarity=0.199  Sum_probs=50.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      ++|.|.|| |++|+-++.+-...|+.+.++.-+.. .|..+      .--..+..+++|.+.+.++.+.||+
T Consensus         2 ~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~-~PA~~------va~~~i~~~~dD~~al~ela~~~DV   65 (375)
T COG0026           2 KTVGILGG-GQLGRMMALAAARLGIKVIVLDPDAD-APAAQ------VADRVIVAAYDDPEALRELAAKCDV   65 (375)
T ss_pred             CeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCC-Cchhh------cccceeecCCCCHHHHHHHHhhCCE
Confidence            58999998 99999999999999999999875442 12111      1124567888999999999999998

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.53  E-value=0.022  Score=49.25  Aligned_cols=37  Identities=27%  Similarity=0.420  Sum_probs=29.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCC---EEEEEcC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHP---KFALIRD   37 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~---v~~~~R~   37 (231)
                      |.++++|.|.||||++|+.+++.|.+..|+   +..+...
T Consensus         1 ~~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~   40 (336)
T PRK08040          1 MSEGWNIALLGATGAVGEALLELLAERQFPVGELYALASE   40 (336)
T ss_pred             CCCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence            777899999999999999999999886544   4445443

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=95.53  E-value=0.03  Score=46.85  Aligned_cols=68  Identities=19%  Similarity=0.146  Sum_probs=46.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      ++++||||+||||++.+..+...  .+..+.+..-.-... .+.++...  ++.+++.+|+.+...+...+..
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~   78 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFET   78 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhcc
Confidence            68999999999999999999876  345554443211111 12222332  7788999999998887776653

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.52  E-value=0.034  Score=47.77  Aligned_cols=32  Identities=19%  Similarity=0.138  Sum_probs=25.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALI   35 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~   35 (231)
                      ++||.|.||+|+.|..|++.|.... .++...+
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~s   34 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILIS   34 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEee
Confidence            4799999999999999999998875 4544443

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.48  E-value=0.12  Score=44.84  Aligned_cols=75  Identities=24%  Similarity=0.179  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCC------------------chh----hhhhhhhcCC--cEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSAS------------------NFN----FSLLRVFHSG--VFDYW   58 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~------------------~~~----~~~~~~~~~~--v~~~~   58 (231)
                      ..+|+|.|+ |++|+.++..|...|. ++++++++.-.                  .+|    .+.++.+.+.  +..+.
T Consensus        24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~  102 (339)
T PRK07688         24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV  102 (339)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            468999998 9999999999999996 78888876311                  011    1122223233  33445


Q ss_pred             EcCCCHHHHHHHHccCCEEEEc
Q 043777           59 GLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus        59 ~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .+++ .+.+.+.++++|+++..
T Consensus       103 ~~~~-~~~~~~~~~~~DlVid~  123 (339)
T PRK07688        103 QDVT-AEELEELVTGVDLIIDA  123 (339)
T ss_pred             ccCC-HHHHHHHHcCCCEEEEc
Confidence            5664 45667778888886644

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=95.47  E-value=0.028  Score=48.07  Aligned_cols=34  Identities=24%  Similarity=0.369  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+|+|.|+ |-+|..++..|.+.|++|+++.|+.
T Consensus         5 ~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~   38 (313)
T PRK06249          5 TPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSD   38 (313)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            579999987 9999999999999999999999975

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.47  E-value=0.029  Score=47.47  Aligned_cols=37  Identities=24%  Similarity=0.207  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |.+.++|.|+|+ |.+|..++..|+.+|++|++++|+.
T Consensus         1 ~~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~   37 (292)
T PRK07530          1 MMAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSA   37 (292)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            666789999998 9999999999999999999999875

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.45  E-value=0.092  Score=46.12  Aligned_cols=72  Identities=18%  Similarity=0.176  Sum_probs=51.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      ..+++|+|+ |.+|+..++.|...|.+|.+++|+..   +.+.+... -+. .+..+..+.+.+.++++++|+++...
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~---~~~~l~~~-~g~-~v~~~~~~~~~l~~~l~~aDvVI~a~  238 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINID---RLRQLDAE-FGG-RIHTRYSNAYEIEDAVKRADLLIGAV  238 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHH---HHHHHHHh-cCc-eeEeccCCHHHHHHHHccCCEEEEcc
Confidence            457999987 99999999999999999999988642   11111111 111 23446677888999999999988643

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.45  E-value=0.073  Score=43.60  Aligned_cols=67  Identities=21%  Similarity=0.258  Sum_probs=41.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC---C-EEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH---P-KFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~---~-v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      |++.++|.|+|+ |.+|+.++..|++.|.   . +.+..|+...  +.   +.+.  .++...    .|   ..++++++
T Consensus         1 ~m~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~--~~---~~~~~~~~~~~~----~~---~~~~~~~~   67 (245)
T PRK07634          1 MLKKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNVE--KL---DQLQARYNVSTT----TD---WKQHVTSV   67 (245)
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCHH--HH---HHHHHHcCcEEe----CC---hHHHHhcC
Confidence            666789999996 9999999999998873   2 4455554211  11   1221  233221    12   34556789


Q ss_pred             CEEEEc
Q 043777           75 DVRFIP   80 (231)
Q Consensus        75 d~~f~p   80 (231)
                      |++++.
T Consensus        68 DiViia   73 (245)
T PRK07634         68 DTIVLA   73 (245)
T ss_pred             CEEEEe
Confidence            998864

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.45  E-value=0.029  Score=47.83  Aligned_cols=37  Identities=22%  Similarity=0.205  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |++.++|.|.|+ |.+|..++..|++.|++|+++.++.
T Consensus         1 ~~~~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~   37 (311)
T PRK06130          1 MNPIQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVME   37 (311)
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            777789999997 9999999999999999999998865

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=95.43  E-value=0.034  Score=41.88  Aligned_cols=74  Identities=19%  Similarity=0.107  Sum_probs=45.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |||.|+||+|.+|++++..|...+  .++++++++..... .+..+.+..  ......... .+    .+.++++|++.+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~~aDivvi   75 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD----YEALKDADIVVI   75 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS----GGGGTTESEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cc----ccccccccEEEE
Confidence            689999999999999999999887  45888888742200 111111211  222222111 23    346788999887


Q ss_pred             cccC
Q 043777           80 PSEY   83 (231)
Q Consensus        80 ps~~   83 (231)
                      ....
T Consensus        76 tag~   79 (141)
T PF00056_consen   76 TAGV   79 (141)
T ss_dssp             TTST
T ss_pred             eccc
Confidence            5543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK06444 prephenate dehydrogenase; Provisional

Probab=95.42  E-value=0.021  Score=45.65  Aligned_cols=28  Identities=21%  Similarity=0.305  Sum_probs=26.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKF   32 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~   32 (231)
                      |++.|+||+|.+|+.+++.|.+.|+.|.
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            5899999999999999999999999886

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.41  E-value=0.076  Score=45.73  Aligned_cols=80  Identities=21%  Similarity=0.188  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCc-hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASN-FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      ++.||.|+||+|++|++++..|+..+.       ++.+++++.... .+...+ .+.........+..-.....+.++++
T Consensus         2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~-Dl~~~~~~~~~~~~i~~~~~~~~~da   80 (323)
T TIGR01759         2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAM-ELEDCAFPLLAGVVATTDPEEAFKDV   80 (323)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHH-HHhhccccccCCcEEecChHHHhCCC
Confidence            356899999999999999999998873       577777753210 111111 11110000000110012345788999


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++.+....
T Consensus        81 DvVVitAG~   89 (323)
T TIGR01759        81 DAALLVGAF   89 (323)
T ss_pred             CEEEEeCCC
Confidence            998886544

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=95.40  E-value=0.03  Score=47.47  Aligned_cols=37  Identities=30%  Similarity=0.384  Sum_probs=33.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |.+.++|.|.|+ |.+|..|+..|+..|++|++..++.
T Consensus         1 ~~~~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~   37 (295)
T PLN02545          1 MAEIKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDP   37 (295)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            776789999998 9999999999999999999998875

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.40  E-value=0.069  Score=45.39  Aligned_cols=65  Identities=18%  Similarity=0.315  Sum_probs=45.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |+|.|+|. |.+|..+++.|.+.|++|.+..|+...   .+.+..  .++..    ..+.+++.+.++.+|++++
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~---~~~l~~--~g~~~----~~s~~~~~~~~~~~dvIi~   65 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDA---VKAMKE--DRTTG----VANLRELSQRLSAPRVVWV   65 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHH--cCCcc----cCCHHHHHhhcCCCCEEEE
Confidence            47999996 999999999999999999999887531   111111  22221    2355666666777888775

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.37  E-value=0.081  Score=40.78  Aligned_cols=65  Identities=23%  Similarity=0.267  Sum_probs=42.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ...++++|+|- |.+|+.+++.|...|..|++..+++     ...++..-.+.++.        .+.++++.+|+.+..
T Consensus        21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DP-----i~alqA~~dGf~v~--------~~~~a~~~adi~vta   85 (162)
T PF00670_consen   21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDP-----IRALQAAMDGFEVM--------TLEEALRDADIFVTA   85 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSH-----HHHHHHHHTT-EEE---------HHHHTTT-SEEEE-
T ss_pred             eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECCh-----HHHHHhhhcCcEec--------CHHHHHhhCCEEEEC
Confidence            34688999998 9999999999999999999988764     22223333666654        267788888876643

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=95.34  E-value=0.067  Score=45.22  Aligned_cols=33  Identities=21%  Similarity=0.307  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|.|. |.+|+.+++.|.+.|++|.+..|+.
T Consensus         3 ~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~   35 (296)
T PRK11559          3 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNP   35 (296)
T ss_pred             ceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            68999996 9999999999999999999988864

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=95.34  E-value=0.026  Score=48.65  Aligned_cols=33  Identities=27%  Similarity=0.350  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|.|+ |.+|..++..|.+.|++|++++|+.
T Consensus         3 mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~~   35 (341)
T PRK08229          3 ARICVLGA-GSIGCYLGGRLAAAGADVTLIGRAR   35 (341)
T ss_pred             ceEEEECC-CHHHHHHHHHHHhcCCcEEEEecHH
Confidence            78999997 9999999999999999999999853

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.32  E-value=0.026  Score=50.64  Aligned_cols=34  Identities=29%  Similarity=0.412  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|+||+|.+|+.+++.|.+.|++|.+++|+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            5799999999999999999999999999999875

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.21  E-value=0.065  Score=44.56  Aligned_cols=34  Identities=12%  Similarity=0.133  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC---CCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG---HPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g---~~v~~~~R~~   38 (231)
                      +|+|.|+|+ |.+|+.++..|.+.|   +.|.++.|+.
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~   38 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSP   38 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence            378999997 999999999999998   6788888864

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.20  E-value=0.034  Score=47.49  Aligned_cols=34  Identities=26%  Similarity=0.274  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .|+|.|+| +|.+|..++..|+++|++|++++|+.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~   35 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP   35 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence            35899999 59999999999999999999999875

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.13  E-value=0.12  Score=44.91  Aligned_cols=69  Identities=20%  Similarity=0.152  Sum_probs=45.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~d~~f   78 (231)
                      +++|||.||+|.+|++.++-+...| ..|++..+..+    .++.+.+.  +. ...|+.+++-.+...+    ++|+++
T Consensus       158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~----~~l~k~lG--Ad-~vvdy~~~~~~e~~kk~~~~~~DvVl  230 (347)
T KOG1198|consen  158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK----LELVKKLG--AD-EVVDYKDENVVELIKKYTGKGVDVVL  230 (347)
T ss_pred             CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch----HHHHHHcC--Cc-EeecCCCHHHHHHHHhhcCCCccEEE
Confidence            5689999999999999999888888 44444443331    23333433  22 3458888666665555    478776


Q ss_pred             E
Q 043777           79 I   79 (231)
Q Consensus        79 ~   79 (231)
                      -
T Consensus       231 D  231 (347)
T KOG1198|consen  231 D  231 (347)
T ss_pred             E
Confidence            4

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.13  E-value=0.13  Score=43.73  Aligned_cols=66  Identities=30%  Similarity=0.401  Sum_probs=48.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .++++|+|+ |.+|+.++..|...|.+|++..|+...   .+....  .++..+     +.+.+.+.++++|++|..
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~---~~~~~~--~G~~~~-----~~~~l~~~l~~aDiVI~t  217 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH---LARITE--MGLSPF-----HLSELAEEVGKIDIIFNT  217 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHH--cCCeee-----cHHHHHHHhCCCCEEEEC
Confidence            579999997 889999999999999999999987421   111111  344332     335677888999998864

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.10  E-value=0.042  Score=42.21  Aligned_cols=31  Identities=23%  Similarity=0.337  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI   35 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~   35 (231)
                      +++|+|.|| |.+|...++.|++.|++|++++
T Consensus        13 ~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         13 NKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            679999998 9999999999999999999885

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.03  E-value=0.22  Score=39.79  Aligned_cols=75  Identities=21%  Similarity=0.181  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCC----------------chhh----hhhhhhcCCcEE--EEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSAS----------------NFNF----SLLRVFHSGVFD--YWGL   60 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~----------------~~~~----~~~~~~~~~v~~--~~~D   60 (231)
                      ..+|+|.|+ |.+|+.+++.|...|. ++++++++.-.                .+|+    +.+..+.+.+++  +...
T Consensus        21 ~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~   99 (202)
T TIGR02356        21 NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER   99 (202)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence            568999997 8999999999999995 78888776211                0111    112222234443  3333


Q ss_pred             CCCHHHHHHHHccCCEEEEc
Q 043777           61 LEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus        61 ~~d~~~l~~al~~~d~~f~p   80 (231)
                      + +.+.+.+.++++|+++..
T Consensus       100 i-~~~~~~~~~~~~D~Vi~~  118 (202)
T TIGR02356       100 V-TAENLELLINNVDLVLDC  118 (202)
T ss_pred             C-CHHHHHHHHhCCCEEEEC
Confidence            4 445677888889987754

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.00  E-value=0.36  Score=41.42  Aligned_cols=72  Identities=17%  Similarity=0.241  Sum_probs=45.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCC-ch-hhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSAS-NF-NFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~-~~-~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      .+||.|+|+ |.+|+.++..|...|.  ++.+++++... .. ..++.....  ..+.+. .  .+    .+.++++|++
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~----~~~~~~adiv   77 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD----YSDCKDADLV   77 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC----HHHhCCCCEE
Confidence            479999998 9999999999998886  68888886532 11 111111111  122222 2  22    3457899998


Q ss_pred             EEcccC
Q 043777           78 FIPSEY   83 (231)
Q Consensus        78 f~ps~~   83 (231)
                      .+....
T Consensus        78 Iitag~   83 (315)
T PRK00066         78 VITAGA   83 (315)
T ss_pred             EEecCC
Confidence            876544

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=94.98  E-value=0.15  Score=47.54  Aligned_cols=68  Identities=19%  Similarity=0.186  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++|+|.|+ |++|+.++.++.+.|++|.+++.+.. .+..    .+ .. ..+.+++.|.+.+.++.+.+|++..
T Consensus        22 ~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~-apa~----~~-AD-~~~v~~~~D~~~l~~~a~~~dvIt~   89 (577)
T PLN02948         22 ETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLED-CPAS----SV-AA-RHVVGSFDDRAAVREFAKRCDVLTV   89 (577)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC-Cchh----hh-Cc-eeeeCCCCCHHHHHHHHHHCCEEEE
Confidence            578999998 89999999999999999999987643 1100    11 11 2445789999999988888888643

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=94.97  E-value=0.048  Score=46.69  Aligned_cols=34  Identities=24%  Similarity=0.177  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCC--EEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHP--KFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~--v~~~~R~~   38 (231)
                      |||.|+||||.+|..++..|+..|+.  |++++|+.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            68999999999999999999999865  88889854

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=94.96  E-value=0.068  Score=45.72  Aligned_cols=71  Identities=18%  Similarity=0.026  Sum_probs=48.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ..++|.||+||.|..++++|.+.|..-.+..|+..+  ...+...  -+...-..++-+++.+.+.+.+++++..
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~k--l~~l~~~--LG~~~~~~p~~~p~~~~~~~~~~~VVln   77 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAK--LDALRAS--LGPEAAVFPLGVPAALEAMASRTQVVLN   77 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHH--HHHHHHh--cCccccccCCCCHHHHHHHHhcceEEEe
Confidence            468999999999999999999999888777776421  0111112  2233333344458888888888887553

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=94.92  E-value=0.095  Score=43.60  Aligned_cols=32  Identities=25%  Similarity=0.262  Sum_probs=26.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIR   36 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R   36 (231)
                      ++|+|+|++|.+|+.+++.+.+. +.++..+..
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d   34 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVD   34 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            68999999999999999988874 577766443

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=94.88  E-value=0.16  Score=44.41  Aligned_cols=66  Identities=18%  Similarity=0.211  Sum_probs=49.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFI   79 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~   79 (231)
                      ||+|.|+ |..|..++.++.+.|+.|++++.+... +..    .+ .. ..+.+|+.|.+.+.+.++  ++|.++.
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~-~~~----~~-ad-~~~~~~~~d~~~l~~~~~~~~id~v~~   68 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANA-PAM----QV-AH-RSYVINMLDGDALRAVIEREKPDYIVP   68 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCC-chh----hh-Cc-eEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence            5899996 999999999999999999999886532 101    11 11 345678899999988887  5887654

This enzyme is an alternative to PurN (TIGR00639)

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=94.87  E-value=0.044  Score=49.98  Aligned_cols=38  Identities=21%  Similarity=0.175  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |.+.|+|.|+|+ |.+|+.++..|++.|++|++.+|+..
T Consensus         1 ~~~i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~   38 (495)
T PRK07531          1 MTMIMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPE   38 (495)
T ss_pred             CCCcCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            666689999986 99999999999999999999998753

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.87  E-value=0.11  Score=45.37  Aligned_cols=32  Identities=19%  Similarity=0.222  Sum_probs=24.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCC---EEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHP---KFALIR   36 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~---v~~~~R   36 (231)
                      ++|.|.||||.+|+.+++.|++. ..+   +..++.
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss   37 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST   37 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence            58999999999999999966654 565   555444

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.86  E-value=0.05  Score=43.54  Aligned_cols=34  Identities=24%  Similarity=0.397  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .|+|+|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus        28 gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          28 GKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            578999998 8999999999999999999887653

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.76  E-value=0.054  Score=45.55  Aligned_cols=34  Identities=18%  Similarity=0.263  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~   38 (231)
                      .++++|+|+ |.+|+.++.+|...| .+|+++.|+.
T Consensus       123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~  157 (278)
T PRK00258        123 GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTV  157 (278)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence            468999997 999999999999999 7899999975

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=94.75  E-value=0.058  Score=46.01  Aligned_cols=33  Identities=27%  Similarity=0.451  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|.|+ |-||..+.-.|.+.|++|+++.|..
T Consensus         3 m~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~~   35 (305)
T PRK05708          3 MTWHILGA-GSLGSLWACRLARAGLPVRLILRDR   35 (305)
T ss_pred             ceEEEECC-CHHHHHHHHHHHhCCCCeEEEEech
Confidence            78999998 9999999999999999999999964

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.71  E-value=0.055  Score=39.79  Aligned_cols=34  Identities=29%  Similarity=0.413  Sum_probs=28.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHh-CCCCEE-EEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIE-YGHPKF-ALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~-~g~~v~-~~~R~~   38 (231)
                      |+|+|.|++|.+|+.+++.+.+ .++++. ++.|+.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~   36 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP   36 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC
Confidence            5899999999999999999999 577755 455554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.68  E-value=0.061  Score=45.90  Aligned_cols=36  Identities=22%  Similarity=0.309  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..|+|.|.|+ |.+|+.++..|.++|++|+++.|+..
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            3689999987 99999999999999999999999764

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=94.67  E-value=0.057  Score=48.03  Aligned_cols=33  Identities=24%  Similarity=0.368  Sum_probs=30.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|.|. |.+|..++..|.+.|++|+++.|+.
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~   33 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQ   33 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCH
Confidence            47999986 9999999999999999999999875

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.64  E-value=0.28  Score=41.60  Aligned_cols=81  Identities=14%  Similarity=0.087  Sum_probs=49.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhh-hhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFS-LLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~-~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++++|.|| |+.+++++..|...|. +++++.|+.....+++ +.+.+.  .+..+...++.+.+.+.+.+.++|++..
T Consensus       124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivIN  202 (288)
T PRK12749        124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTN  202 (288)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEE
Confidence            468999998 7789999999999885 7889999743101122 222222  1111222333333345566777888776


Q ss_pred             cccCCC
Q 043777           80 PSEYGA   85 (231)
Q Consensus        80 ps~~g~   85 (231)
                      .+..|.
T Consensus       203 aTp~Gm  208 (288)
T PRK12749        203 GTKVGM  208 (288)
T ss_pred             CCCCCC
Confidence            555554

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.63  E-value=0.066  Score=45.27  Aligned_cols=38  Identities=21%  Similarity=0.307  Sum_probs=33.1

Q ss_pred             CCCC-CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            1 MAGK-SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         1 M~~~-~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |++. ++|.|.|+ |.+|+.++..|+..|++|+++++++.
T Consensus         1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~   39 (286)
T PRK07819          1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEE   39 (286)
T ss_pred             CCCCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHH
Confidence            4443 58999998 99999999999999999999999764

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=94.57  E-value=0.21  Score=42.83  Aligned_cols=74  Identities=22%  Similarity=0.046  Sum_probs=44.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      ||.|+||+|.+|++++-.|...+.  ++.+++++. ....+..+.+......+....  +.+++.++++++|++++...
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG   76 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAG   76 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCC
Confidence            589999999999999999988874  577777765 211111111111112222111  11235678999999887544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=94.55  E-value=0.059  Score=45.54  Aligned_cols=33  Identities=27%  Similarity=0.413  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|.|+ |.+|..++..|.+.|++|+++.|+.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~   33 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRG   33 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCh
Confidence            57999998 9999999999999999999999964

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=94.49  E-value=0.13  Score=43.73  Aligned_cols=33  Identities=18%  Similarity=0.360  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++|.|+|. |.+|..++..|++.|++|+++.|+.
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~   34 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNP   34 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            47999986 9999999999999999999998875

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.46  E-value=0.047  Score=41.84  Aligned_cols=70  Identities=23%  Similarity=0.300  Sum_probs=44.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhh------hcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRV------FHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~------~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ||.|.|| |..|.+++..|..+|++|.++.|+...   .+.++.      +..++..- ..+.=..++.++++++|++++
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~---~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~Iii   75 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQ---IEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADIIII   75 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHH---HHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHH---HHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEEEe
Confidence            6899998 999999999999999999999997521   111111      00222211 011112456788999999776


Q ss_pred             c
Q 043777           80 P   80 (231)
Q Consensus        80 p   80 (231)
                      .
T Consensus        76 a   76 (157)
T PF01210_consen   76 A   76 (157)
T ss_dssp             -
T ss_pred             c
Confidence            3

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=94.44  E-value=0.09  Score=43.97  Aligned_cols=77  Identities=21%  Similarity=0.135  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC-Cch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA-SNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~-~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .-||.|.||+|+||+.+.- |++....|.-+.--.- ..+ -+..+.+...  +.....++-.+.+.++++++|++.+|.
T Consensus        28 ~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T--~s~V~g~~g~~~L~~al~~advVvIPA  104 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANTPGVAADLSHINT--NSSVVGFTGADGLENALKGADVVVIPA  104 (345)
T ss_pred             cceEEEEecCCccCccHHH-HHhcCcccceeeeeecccCCcccccccccCC--CCceeccCChhHHHHHhcCCCEEEecC
Confidence            4589999999999999864 5566655543322110 011 1111112111  123345666789999999999999987


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus       105 GV  106 (345)
T KOG1494|consen  105 GV  106 (345)
T ss_pred             CC
Confidence            54

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.44  E-value=0.28  Score=38.32  Aligned_cols=32  Identities=22%  Similarity=0.148  Sum_probs=27.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      +|+|.|+ |.+|+.+++.|...|. ++++++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            5899997 8999999999999996 488887764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN02688 pyrroline-5-carboxylate reductase

Probab=94.41  E-value=0.17  Score=42.04  Aligned_cols=32  Identities=19%  Similarity=0.169  Sum_probs=27.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC----CEEEE-EcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH----PKFAL-IRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~----~v~~~-~R~   37 (231)
                      |+|.++| .|.+|+.+++.|++.|+    ++++. .|+
T Consensus         1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~   37 (266)
T PLN02688          1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSN   37 (266)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCC
Confidence            5799999 59999999999999998    77777 554

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.41  E-value=0.23  Score=42.20  Aligned_cols=33  Identities=30%  Similarity=0.491  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|+|. |.+|+.+++.|++.|++|.+..|+.
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~   33 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNP   33 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCH
Confidence            47999985 9999999999999999999998874

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=94.36  E-value=0.16  Score=44.09  Aligned_cols=64  Identities=19%  Similarity=0.175  Sum_probs=48.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      +|.|.|+ |++|+.++.++.+.|+.|++++.++.. + +.   .+ .. ..+.+++.|.+.+.+..+.+|++
T Consensus         1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~-p-~~---~~-ad-~~~~~~~~d~~~i~~~a~~~dvi   64 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANS-P-AV---QV-AD-HVVLAPFFDPAAIRELAESCDVI   64 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCC-C-hh---Hh-Cc-eeEeCCCCCHHHHHHHHhhCCEE
Confidence            4789998 899999999999999999999775421 1 10   11 11 23467899999999999888874

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.32  E-value=0.073  Score=41.82  Aligned_cols=33  Identities=27%  Similarity=0.261  Sum_probs=28.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +|.|.|| |.+|+.|+..++..|++|++.+++..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~   33 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPE   33 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            6899998 99999999999999999999998753

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK08163 salicylate hydroxylase; Provisional

Probab=94.29  E-value=0.09  Score=46.14  Aligned_cols=38  Identities=21%  Similarity=0.190  Sum_probs=34.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |+++++|+|+|| |-.|..++..|.+.|++|+++-|...
T Consensus         1 ~~~~~~V~IvGa-GiaGl~~A~~L~~~g~~v~v~Er~~~   38 (396)
T PRK08163          1 MTKVTPVLIVGG-GIGGLAAALALARQGIKVKLLEQAAE   38 (396)
T ss_pred             CCCCCeEEEECC-cHHHHHHHHHHHhCCCcEEEEeeCcc
Confidence            787889999998 99999999999999999999998753

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.27  E-value=0.067  Score=47.69  Aligned_cols=36  Identities=19%  Similarity=0.188  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |. .|+|.|+|. |++|..++..|.+.|++|++++|+.
T Consensus         1 m~-~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~   36 (415)
T PRK11064          1 MS-FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQ   36 (415)
T ss_pred             CC-ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCH
Confidence            66 588999986 9999999999999999999999875

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional

Probab=94.22  E-value=0.085  Score=46.63  Aligned_cols=33  Identities=27%  Similarity=0.274  Sum_probs=30.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .+|+|+|| |.+|..++.+|.++|++|.++.|..
T Consensus         2 ~~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~   34 (410)
T PRK12409          2 SHIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR   34 (410)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            38999998 9999999999999999999999874

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.19  E-value=0.058  Score=38.26  Aligned_cols=34  Identities=24%  Similarity=0.325  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      ++++|+|+|| |.+|.+=++.|++.|.+|++++..
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~   39 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPE   39 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCc
Confidence            3679999998 999999999999999999999875

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.17  E-value=0.36  Score=38.99  Aligned_cols=33  Identities=24%  Similarity=0.206  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~   37 (231)
                      ..+|+|.|+ |.+|+.++..|...|.. +++++.+
T Consensus        28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            468999997 89999999999999964 7777766

>PRK06847 hypothetical protein; Provisional

Probab=94.13  E-value=0.1  Score=45.35  Aligned_cols=37  Identities=24%  Similarity=0.194  Sum_probs=34.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+++++|+|+|| |-.|..++..|.+.|++|+++-|..
T Consensus         1 m~~~~~V~IVGa-G~aGl~~A~~L~~~g~~v~v~E~~~   37 (375)
T PRK06847          1 MAAVKKVLIVGG-GIGGLSAAIALRRAGIAVDLVEIDP   37 (375)
T ss_pred             CCCcceEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            888889999998 9999999999999999999998865

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=94.10  E-value=0.086  Score=44.61  Aligned_cols=31  Identities=35%  Similarity=0.554  Sum_probs=29.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR   36 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R   36 (231)
                      |+|+|.|+ |.+|..++..|.+.|++|+++.|
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r   31 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR   31 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCceEEEec
Confidence            57999997 99999999999999999999999

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=94.08  E-value=0.34  Score=39.50  Aligned_cols=78  Identities=9%  Similarity=0.063  Sum_probs=54.6

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      .|++||+|-.  ..|+-.|++.|.++|.++........-   .+.++.+.   ....+++||+++.+++...+..     
T Consensus         6 GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l---~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~   82 (259)
T COG0623           6 GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERL---EKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW   82 (259)
T ss_pred             CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHH---HHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence            7899999976  479999999999999998777665311   11122221   2235689999999998887764     


Q ss_pred             --CCEEEEcccCC
Q 043777           74 --VDVRFIPSEYG   84 (231)
Q Consensus        74 --~d~~f~ps~~g   84 (231)
                        .|.+.|.-.|.
T Consensus        83 g~lD~lVHsIaFa   95 (259)
T COG0623          83 GKLDGLVHSIAFA   95 (259)
T ss_pred             CcccEEEEEeccC
Confidence              56666654443

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=94.05  E-value=0.15  Score=43.70  Aligned_cols=33  Identities=33%  Similarity=0.548  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |||+|.|+ |-+|+.+.-.|.+.|++|+++.|+.
T Consensus         1 mkI~IlGa-GAvG~l~g~~L~~~g~~V~~~~R~~   33 (307)
T COG1893           1 MKILILGA-GAIGSLLGARLAKAGHDVTLLVRSR   33 (307)
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCCeEEEEecHH
Confidence            68999998 9999999999999999999999875

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=93.99  E-value=0.14  Score=43.21  Aligned_cols=61  Identities=20%  Similarity=0.201  Sum_probs=41.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|.|+|. |.+|+.++..|++.|++|++..|+...   .+.+..  .+..       ...+..++++++|++++
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~---~~~~~~--~g~~-------~~~~~~~~~~~aDivi~   61 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEV---ADELLA--AGAV-------TAETARQVTEQADVIFT   61 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHH---HHHHHH--CCCc-------ccCCHHHHHhcCCEEEE
Confidence            4788885 999999999999999999999887421   111111  2221       11234567777888775

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=93.97  E-value=0.1  Score=43.72  Aligned_cols=34  Identities=21%  Similarity=0.207  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|+|+ |.+|+.++..|.+.|++|.++.|+.
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~  150 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTV  150 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            568999998 8999999999999999999998874

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.96  E-value=0.12  Score=43.55  Aligned_cols=36  Identities=22%  Similarity=0.241  Sum_probs=31.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+ .++|.|.|+ |.+|..++..|++.|++|+++.++.
T Consensus         1 ~~-~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~   36 (282)
T PRK05808          1 MG-IQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISD   36 (282)
T ss_pred             CC-ccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCH
Confidence            55 468999998 9999999999999999999998764

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=93.96  E-value=0.25  Score=38.20  Aligned_cols=69  Identities=20%  Similarity=0.186  Sum_probs=45.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcC-------------------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLL-------------------ED   63 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~-------------------~d   63 (231)
                      +.+|+|+|+ |.+|..-++.|...|++|+++.....      .++... .....+..++                   ..
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~   92 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPE------RLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESY   92 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHH------HHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHH------HHHhhhcccCceEEEcccccccccccchhhhhHHHHHh
Confidence            468999996 99999999999999999999887531      112222 4445555542                   12


Q ss_pred             HHHHHHHHccCCEEEE
Q 043777           64 EKSLLEAVKQVDVRFI   79 (231)
Q Consensus        64 ~~~l~~al~~~d~~f~   79 (231)
                      ...+.+.++.+|.+..
T Consensus        93 ~~~f~~~i~~~d~vI~  108 (168)
T PF01262_consen   93 ESNFAEFIAPADIVIG  108 (168)
T ss_dssp             HHHHHHHHHH-SEEEE
T ss_pred             HHHHHHHHhhCcEEee
Confidence            3457777888888775

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=93.83  E-value=2.4  Score=35.94  Aligned_cols=33  Identities=24%  Similarity=0.353  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.++|. |.+|+.+++.|++.|++|.++.|+.
T Consensus         1 m~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~   33 (299)
T PRK12490          1 MKLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQ   33 (299)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCH
Confidence            47899985 9999999999999999999998864

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.79  E-value=0.27  Score=43.90  Aligned_cols=64  Identities=20%  Similarity=0.181  Sum_probs=44.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ..++++|+|. |.+|+.++..|...|.+|++..+++..   .  ......++.+.        .+.++++++|+++..
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r---a--~~A~~~G~~v~--------~l~eal~~aDVVI~a  274 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC---A--LQAAMDGFRVM--------TMEEAAELGDIFVTA  274 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh---h--HHHHhcCCEec--------CHHHHHhCCCEEEEC
Confidence            3678999997 999999999999999999998886531   1  11111333321        145667788887653

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.76  E-value=0.12  Score=38.97  Aligned_cols=31  Identities=35%  Similarity=0.590  Sum_probs=28.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|+ |-+|..++..|.+.|++|.++.|..
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~   31 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP   31 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc
Confidence            688998 9999999999999999999999975

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=93.73  E-value=0.16  Score=36.91  Aligned_cols=32  Identities=28%  Similarity=0.371  Sum_probs=26.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhC-CCCEEEE-EcC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEY-GHPKFAL-IRD   37 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~-g~~v~~~-~R~   37 (231)
                      ++.|+|++|.+|+.+++.|.+. ++++..+ .|+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~   34 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASA   34 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEech
Confidence            5789999999999999999985 7788777 443

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=93.73  E-value=0.27  Score=41.51  Aligned_cols=77  Identities=18%  Similarity=0.028  Sum_probs=48.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++++|.|+ |+.|+.++.+|.+.|. +|+++.|+...  ..++.+.+.....+..  +...+++...+.++|+++-...
T Consensus       125 ~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~k--a~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaTp  199 (282)
T TIGR01809       125 GFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDK--LSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTVP  199 (282)
T ss_pred             CceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHH--HHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECCC
Confidence            568999997 9999999999999996 68899887431  1122222221111111  2222344556677898876655


Q ss_pred             CCC
Q 043777           83 YGA   85 (231)
Q Consensus        83 ~g~   85 (231)
                      .|.
T Consensus       200 ~g~  202 (282)
T TIGR01809       200 ADV  202 (282)
T ss_pred             CCC
Confidence            553

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=93.71  E-value=0.11  Score=44.98  Aligned_cols=32  Identities=22%  Similarity=0.310  Sum_probs=26.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIR   36 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R   36 (231)
                      ++|+|+||||++|+++++.|.+.+ .++..+.+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence            479999999999999999888876 57776644

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=93.70  E-value=0.15  Score=42.52  Aligned_cols=74  Identities=19%  Similarity=0.016  Sum_probs=45.8

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC----CCEEEEEcCCCC-chhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYG----HPKFALIRDSAS-NFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g----~~v~~~~R~~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      |.|+||+|.+|..++..|+..|    .++.+++++... ......+++.....  ....+.-..++.++++++|.++...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~~~aDiVv~t~   78 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAFKDADVVIITA   78 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHhCCCCEEEECC
Confidence            5789999999999999999888    678888876532 11111122221111  0112222233577889999988854


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        79 ~   79 (263)
T cd00650          79 G   79 (263)
T ss_pred             C
Confidence            3

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=93.69  E-value=0.091  Score=41.50  Aligned_cols=33  Identities=27%  Similarity=0.407  Sum_probs=26.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|.|. |++|..++..|.+.|++|++++.+.
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~   33 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDE   33 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCCh
Confidence            68999985 9999999999999999999998864

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=93.67  E-value=0.19  Score=44.61  Aligned_cols=66  Identities=29%  Similarity=0.334  Sum_probs=50.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhh-hhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFS-LLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~-~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .++++|+|| |-+|.-++++|.+.| ..|+++.|...   +++ +...+  +     +.+...+.+...+.++|++|..
T Consensus       178 ~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~e---rA~~La~~~--~-----~~~~~l~el~~~l~~~DvViss  245 (414)
T COG0373         178 DKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLE---RAEELAKKL--G-----AEAVALEELLEALAEADVVISS  245 (414)
T ss_pred             cCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHH---HHHHHHHHh--C-----CeeecHHHHHHhhhhCCEEEEe
Confidence            578999998 999999999999999 56888888643   222 12222  1     5666788899999999999964

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=93.67  E-value=0.28  Score=42.14  Aligned_cols=64  Identities=19%  Similarity=0.185  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|.|+|+ |.+|+++++.|.+.|+++++..|+....  .+...  ..++..     .+   ..++++++|++++.
T Consensus         3 ~kkIgiIG~-G~mG~AiA~~L~~sG~~Viv~~~~~~~~--~~~a~--~~Gv~~-----~s---~~ea~~~ADiVvLa   66 (314)
T TIGR00465         3 GKTVAIIGY-GSQGHAQALNLRDSGLNVIVGLRKGGAS--WKKAT--EDGFKV-----GT---VEEAIPQADLIMNL   66 (314)
T ss_pred             cCEEEEEeE-cHHHHHHHHHHHHCCCeEEEEECcChhh--HHHHH--HCCCEE-----CC---HHHHHhcCCEEEEe
Confidence            688999996 9999999999999998887666654211  11111  134431     12   45677889998864

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=93.65  E-value=0.14  Score=39.84  Aligned_cols=51  Identities=20%  Similarity=0.255  Sum_probs=40.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|+|+|+++.+|..+++.|.+.|..|+++.|..                          +.+.+.++++|+++..
T Consensus        44 gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------~~l~~~l~~aDiVIsa   94 (168)
T cd01080          44 GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------KNLKEHTKQADIVIVA   94 (168)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------hhHHHHHhhCCEEEEc
Confidence            68999999965679999999999998888887642                          2456677888888754

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=93.64  E-value=0.25  Score=42.25  Aligned_cols=69  Identities=25%  Similarity=0.236  Sum_probs=47.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++|+|.|+ |.+|+.+++.|...| ..|+++.|+...  ..+....+  +...     .+.+++.+++.++|+++....
T Consensus       178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~r--a~~la~~~--g~~~-----~~~~~~~~~l~~aDvVi~at~  247 (311)
T cd05213         178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYER--AEELAKEL--GGNA-----VPLDELLELLNEADVVISATG  247 (311)
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHH--HHHHHHHc--CCeE-----EeHHHHHHHHhcCCEEEECCC
Confidence            679999998 999999999999866 678888886421  11122222  2222     233567788889999987544

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=93.64  E-value=0.35  Score=37.26  Aligned_cols=64  Identities=23%  Similarity=0.274  Sum_probs=43.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ++++|+|+|- |..|.+.+..|.+.|.+|++-.|..+.+. .   +.-..|.++        .++.++.+.+|++.+
T Consensus         3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~-~---~A~~~Gf~v--------~~~~eAv~~aDvV~~   66 (165)
T PF07991_consen    3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASW-E---KAKADGFEV--------MSVAEAVKKADVVML   66 (165)
T ss_dssp             CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHH-H---HHHHTT-EC--------CEHHHHHHC-SEEEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCH-H---HHHHCCCee--------ccHHHHHhhCCEEEE
Confidence            3689999998 77899999999999999999999875311 1   111145443        257788889998764

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK08818 prephenate dehydrogenase; Provisional

Probab=93.63  E-value=0.12  Score=45.33  Aligned_cols=37  Identities=16%  Similarity=0.113  Sum_probs=32.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRD   37 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~   37 (231)
                      |...++|+|+|.+|.+|+++++.|.+. +++|++++|.
T Consensus         1 ~~~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~   38 (370)
T PRK08818          1 MIAQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPA   38 (370)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCC
Confidence            666789999999999999999999975 7888888774

>PLN00203 glutamyl-tRNA reductase

Probab=93.61  E-value=0.18  Score=46.28  Aligned_cols=72  Identities=24%  Similarity=0.339  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++|+|+|+ |.+|+.+++.|...|. +|+++.|+...  ...+...+ .++.+.   +...+++.+++.++|+++....
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~er--a~~La~~~-~g~~i~---~~~~~dl~~al~~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEER--VAALREEF-PDVEII---YKPLDEMLACAAEADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHH--HHHHHHHh-CCCceE---eecHhhHHHHHhcCCEEEEccC
Confidence            578999998 9999999999999996 68888887531  11111222 132222   2233456778889999887543

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=93.59  E-value=0.58  Score=40.04  Aligned_cols=72  Identities=22%  Similarity=0.167  Sum_probs=44.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhhhhhh-c-CCc-EEEEEcCCCHHHHHHHHccCCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSLLRVF-H-SGV-FDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~~~~~-~-~~v-~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      +||.|+|| |+||+.++-.|+.++  .++.++++...... .+..+.+- . .+. ..+.+| .+    .+.++++|+++
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            58999999 999999999998776  36888888743211 11111111 1 111 112222 22    46778999998


Q ss_pred             Eccc
Q 043777           79 IPSE   82 (231)
Q Consensus        79 ~ps~   82 (231)
                      ++..
T Consensus        75 itAG   78 (313)
T COG0039          75 ITAG   78 (313)
T ss_pred             EeCC
Confidence            8653

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.56  E-value=0.35  Score=43.85  Aligned_cols=70  Identities=16%  Similarity=0.156  Sum_probs=45.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +++|+|+|+ |.+|..+++.|.++|++|+++.+..... .....+.+. .++.+..++-..      ...++|.+++..
T Consensus        16 ~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~-~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s~   86 (480)
T PRK01438         16 GLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDER-HRALAAILEALGATVRLGPGPT------LPEDTDLVVTSP   86 (480)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhh-hHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEECC
Confidence            568999998 9999999999999999999988654211 111112333 577776544221      234567666543

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.56  E-value=0.39  Score=43.42  Aligned_cols=64  Identities=19%  Similarity=0.209  Sum_probs=44.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ..++++|+|. |.||+.+++.|...|.+|++..+++..   .  ......++.+.        .+.++++++|+++..
T Consensus       253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~---a--~~A~~~G~~~~--------~leell~~ADIVI~a  316 (476)
T PTZ00075        253 AGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPIC---A--LQAAMEGYQVV--------TLEDVVETADIFVTA  316 (476)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh---H--HHHHhcCceec--------cHHHHHhcCCEEEEC
Confidence            4689999997 899999999999999999888776431   1  01111333322        256678889987764

>PRK00711 D-amino acid dehydrogenase small subunit; Validated

Probab=93.55  E-value=0.12  Score=45.74  Aligned_cols=33  Identities=27%  Similarity=0.366  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|+|| |.+|..++.+|.++|++|.++.|..
T Consensus         1 ~~v~IVG~-Gi~Gls~A~~l~~~g~~V~vle~~~   33 (416)
T PRK00711          1 MRVVVLGS-GVIGVTSAWYLAQAGHEVTVIDRQP   33 (416)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            47999998 9999999999999999999999964

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.54  E-value=0.14  Score=43.12  Aligned_cols=35  Identities=23%  Similarity=0.185  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      .++|.|.|+ |.+|..++..|...|++|++++++..
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~   37 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDE   37 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence            468999997 99999999999999999999998753

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=93.52  E-value=0.2  Score=43.80  Aligned_cols=68  Identities=18%  Similarity=0.117  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHH-HHHHHHccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEK-SLLEAVKQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~-~l~~al~~~d~~f   78 (231)
                      +++||+.|+ ||+.+.+++.|.+++ .+|++.+|....   +   +++.  ..++.+..|+++++ .|.+.++..|.+.
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~---~---~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~vi   73 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKD---A---EALVKGINIKAVSLDVADEELALRKEVKPLDLVI   73 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHH---H---HHHhcCCCccceEEEccchHHHHHhhhcccceee
Confidence            468999996 999999999999876 677777775421   2   2232  34778899999998 8999999988843

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=93.52  E-value=0.29  Score=42.22  Aligned_cols=64  Identities=22%  Similarity=0.228  Sum_probs=44.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .++|.|+|. |.+|++++..|.+.|++|++..|+.+..  .+....  .++..     .   +..++++++|++++.
T Consensus        17 gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s--~~~A~~--~G~~~-----~---s~~eaa~~ADVVvLa   80 (330)
T PRK05479         17 GKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKS--WKKAEA--DGFEV-----L---TVAEAAKWADVIMIL   80 (330)
T ss_pred             CCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhh--HHHHHH--CCCee-----C---CHHHHHhcCCEEEEc
Confidence            578999997 9999999999999999998877764321  111111  33321     1   456778888987763

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.51  E-value=0.13  Score=44.27  Aligned_cols=33  Identities=15%  Similarity=0.123  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|.|| |-+|..++..|.++|++|.++.|+.
T Consensus         1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~   33 (326)
T PRK14620          1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNH   33 (326)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCH
Confidence            47999998 9999999999999999999999864

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=93.47  E-value=0.15  Score=43.09  Aligned_cols=34  Identities=15%  Similarity=0.110  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|.|.|+ |.+|..++..|.+.|++|++++++.
T Consensus         3 i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~   36 (291)
T PRK06035          3 IKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSE   36 (291)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            468999997 9999999999999999999998875

>PLN02494 adenosylhomocysteinase

Probab=93.45  E-value=0.38  Score=43.41  Aligned_cols=63  Identities=16%  Similarity=0.173  Sum_probs=43.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ..++++|+|. |.||+.+++.+...|.+|+++.+++..   .  ......+..++        .+.++++.+|+++.
T Consensus       253 aGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r---~--~eA~~~G~~vv--------~leEal~~ADVVI~  315 (477)
T PLN02494        253 AGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC---A--LQALMEGYQVL--------TLEDVVSEADIFVT  315 (477)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh---h--HHHHhcCCeec--------cHHHHHhhCCEEEE
Confidence            3688999997 999999999999999999888876531   1  11111344322        24556777888775

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=93.43  E-value=0.12  Score=47.67  Aligned_cols=34  Identities=26%  Similarity=0.241  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|+|| |++|++++.+|.+.|++|.++.|+.
T Consensus       379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~  412 (529)
T PLN02520        379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTY  412 (529)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            468999999 8999999999999999988888863

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=93.41  E-value=0.32  Score=41.91  Aligned_cols=34  Identities=26%  Similarity=0.357  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      ..+|||+||+|.+|+..++-+...|+.+++.+.+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s  176 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS  176 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecC
Confidence            4689999999999999999888899776666554

>PRK06545 prephenate dehydrogenase; Validated

Probab=93.41  E-value=0.3  Score=42.65  Aligned_cols=67  Identities=22%  Similarity=0.202  Sum_probs=43.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ++|.|+|. |.+|..++..|.+.|+++.+..++...   .+....  .+..+.. +  ...++.++++++|++++.
T Consensus         1 ~~I~iIG~-GliG~siA~~L~~~G~~v~i~~~~~~~---~~~~~a--~~~~~~~-~--~~~~~~~~~~~aDlVila   67 (359)
T PRK06545          1 RTVLIVGL-GLIGGSLALAIKAAGPDVFIIGYDPSA---AQLARA--LGFGVID-E--LAADLQRAAAEADLIVLA   67 (359)
T ss_pred             CeEEEEEe-CHHHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHH--hcCCCCc-c--cccCHHHHhcCCCEEEEe
Confidence            46889986 999999999999999999999887642   111111  1111110 1  113456677889988763

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=93.40  E-value=0.33  Score=40.21  Aligned_cols=61  Identities=10%  Similarity=0.035  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      +++|+|.|||+ =|+.+++.|.++|+++++.+-.....        .. .++.+..+-+.|.+.+.+.+++
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~--------~~~~~~~v~~G~l~~~~~l~~~l~~   63 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG--------PADLPGPVRVGGFGGAEGLAAYLRE   63 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC--------cccCCceEEECCCCCHHHHHHHHHH
Confidence            37899999988 69999999999999887665443210        11 5667788888899999999875

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=93.40  E-value=0.33  Score=43.34  Aligned_cols=69  Identities=19%  Similarity=0.222  Sum_probs=48.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++++|+|+ |.+|+.+++.|...| .+|+++.|+...  .......+  +...+     +.+++.+++.++|+++....
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~r--a~~la~~~--g~~~i-----~~~~l~~~l~~aDvVi~aT~  249 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYER--AEDLAKEL--GGEAV-----KFEDLEEYLAEADIVISSTG  249 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHH--HHHHHHHc--CCeEe-----eHHHHHHHHhhCCEEEECCC
Confidence            578999997 999999999999999 779999887421  01111222  22222     23567788889999987644

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=93.39  E-value=0.68  Score=37.68  Aligned_cols=66  Identities=17%  Similarity=0.223  Sum_probs=46.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|||.|| |.++..=++.|++.|..|++++-.-+  +  + +..+.  ..+++++-++.. +.    +++++.+|..
T Consensus        25 ~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~--~--e-l~~l~~~~~i~~~~r~~~~-~d----l~g~~LViaA   92 (223)
T PRK05562         25 KIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFS--K--E-FLDLKKYGNLKLIKGNYDK-EF----IKDKHLIVIA   92 (223)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCC--H--H-HHHHHhCCCEEEEeCCCCh-HH----hCCCcEEEEC
Confidence            578999998 99999999999999999999875432  1  1 11222  567777766642 22    4667777655

>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]

Probab=93.37  E-value=0.15  Score=44.43  Aligned_cols=37  Identities=27%  Similarity=0.316  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |.++++|+|+|| |.+|...+-.|.+.|++|+++.+..
T Consensus         1 ~~~~~~vvVIGg-Gi~Gls~A~~La~~G~~V~vie~~~   37 (387)
T COG0665           1 MSMKMDVVIIGG-GIVGLSAAYYLAERGADVTVLEAGE   37 (387)
T ss_pred             CCCcceEEEECC-cHHHHHHHHHHHHcCCEEEEEecCc
Confidence            456789999996 9999999999999999998888754

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.36  E-value=0.15  Score=43.83  Aligned_cols=34  Identities=24%  Similarity=0.296  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|.|.|+ |-+|+.++..|+..|++|++.++++
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~   40 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAP   40 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            368999997 9999999999999999999999875

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=93.35  E-value=0.31  Score=43.50  Aligned_cols=68  Identities=21%  Similarity=0.252  Sum_probs=47.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhh-hhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLL-RVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~-~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +++|+|.|+ |.+|+.++..|.+.|. ++++..|...   +++.+ ..+. ..     .....+++.+.+.++|+++...
T Consensus       181 ~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~---ra~~La~~~~-~~-----~~~~~~~l~~~l~~aDiVI~aT  250 (414)
T PRK13940        181 SKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIE---KAQKITSAFR-NA-----SAHYLSELPQLIKKADIIIAAV  250 (414)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHH---HHHHHHHHhc-CC-----eEecHHHHHHHhccCCEEEECc
Confidence            578999998 9999999999999995 6888888642   12222 2221 11     2223467788899999988654

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.32  E-value=0.14  Score=43.85  Aligned_cols=33  Identities=18%  Similarity=0.286  Sum_probs=26.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIR   36 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R   36 (231)
                      +.+|.|.||||++|..+++.|.+.. .++..+.+
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s   35 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPE   35 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEec
Confidence            4799999999999999999888776 34444443

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=93.26  E-value=0.77  Score=39.09  Aligned_cols=30  Identities=23%  Similarity=0.438  Sum_probs=24.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIR   36 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R   36 (231)
                      ||+|.|+ |.+|..+++.|...|. ++++++.
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~   31 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDS   31 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            5899998 8899999999999995 4555543

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.18  E-value=0.17  Score=42.76  Aligned_cols=34  Identities=18%  Similarity=0.201  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ++|.|.|+ |.+|..++..|.++|++|++++|+..
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~   35 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQE   35 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHH
Confidence            57999998 99999999999999999999998753

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.13  E-value=0.38  Score=40.67  Aligned_cols=34  Identities=21%  Similarity=0.233  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      .++++|.|| |+.|++++-+|.+.|. +++++.|+.
T Consensus       127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~  161 (283)
T PRK14027        127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT  161 (283)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH
Confidence            468999998 9999999999999995 688888864

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.10  E-value=0.14  Score=42.97  Aligned_cols=33  Identities=21%  Similarity=0.363  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|.|. |.+|..++..|.+.|++|.+++|+.
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~   33 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRE   33 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            47999995 9999999999999999999998864

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.07  E-value=0.51  Score=40.44  Aligned_cols=61  Identities=21%  Similarity=0.303  Sum_probs=45.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++|.|.|- |.||+.+++.|..-|.+|.+..|.....          .++...    ....++.++++++|++.+
T Consensus       136 g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~----------~~~~~~----~~~~~l~e~l~~aDvvv~  196 (312)
T PRK15469        136 DFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW----------PGVQSF----AGREELSAFLSQTRVLIN  196 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC----------CCceee----cccccHHHHHhcCCEEEE
Confidence            578999996 9999999999999999999988754210          111111    134578889999998765

>TIGR00936 ahcY adenosylhomocysteinase

Probab=93.05  E-value=0.46  Score=42.24  Aligned_cols=35  Identities=23%  Similarity=0.239  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..++++|.|. |.+|+.++..+...|.+|+++.+++
T Consensus       194 ~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp  228 (406)
T TIGR00936       194 AGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDP  228 (406)
T ss_pred             CcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCCh
Confidence            3678999997 9999999999999999999988765

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=93.03  E-value=0.16  Score=40.66  Aligned_cols=33  Identities=18%  Similarity=0.223  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~   37 (231)
                      .++|+|.|+ |.+|+.++..|.+.|. ++++++++
T Consensus        21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            568999998 8899999999999997 58887776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.03  E-value=0.77  Score=40.40  Aligned_cols=33  Identities=27%  Similarity=0.263  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~   37 (231)
                      .++|+|.|+ |.+|+.++..|...|. ++++++++
T Consensus       135 ~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        135 EARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             cCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            468999987 8899999999999996 67777776

>PRK07236 hypothetical protein; Provisional

Probab=93.01  E-value=0.2  Score=43.88  Aligned_cols=34  Identities=18%  Similarity=0.078  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|.|| |-.|..++..|.+.|++|+++-|..
T Consensus         6 ~~~ViIVGa-G~aGl~~A~~L~~~G~~v~v~E~~~   39 (386)
T PRK07236          6 GPRAVVIGG-SLGGLFAALLLRRAGWDVDVFERSP   39 (386)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            468999998 9999999999999999999999875

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=92.87  E-value=0.34  Score=43.33  Aligned_cols=69  Identities=26%  Similarity=0.248  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++|+|+|+ |.+|+.+++.|...|. +|++..|+...  .......+  +.     +..+.+++.+++.++|+++....
T Consensus       182 ~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~r--a~~la~~~--g~-----~~~~~~~~~~~l~~aDvVI~aT~  251 (423)
T PRK00045        182 GKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLER--AEELAEEF--GG-----EAIPLDELPEALAEADIVISSTG  251 (423)
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHH--HHHHHHHc--CC-----cEeeHHHHHHHhccCCEEEECCC
Confidence            578999997 9999999999999996 68888886421  11122222  22     22234567778889999887644

>PLN02928 oxidoreductase family protein

Probab=92.87  E-value=0.38  Score=41.91  Aligned_cols=73  Identities=21%  Similarity=0.256  Sum_probs=47.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .+++.|.|- |.||+.+++.|..-|.+|.+..|.....+ .... .++ ..+..+........++.++++++|++++
T Consensus       159 gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl  232 (347)
T PLN02928        159 GKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEP-EDGL-LIPNGDVDDLVDEKGGHEDIYEFAGEADIVVL  232 (347)
T ss_pred             CCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhh-hhhh-ccccccccccccccCcccCHHHHHhhCCEEEE
Confidence            578999997 99999999999999999999887532111 0000 000 1111111111245678999999999776

>cd05295 MDH_like Malate dehydrogenase-like

Probab=92.80  E-value=0.19  Score=45.11  Aligned_cols=26  Identities=15%  Similarity=0.174  Sum_probs=22.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHh
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIE   26 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~   26 (231)
                      |.+.-+|+||||+|+||.+++-.+.+
T Consensus       120 ~~~p~~V~vtgAag~i~Y~l~~~ia~  145 (452)
T cd05295         120 KINPLQVCITNASAPLCYHLIPSLAS  145 (452)
T ss_pred             CCCceEEEEecCcHHHHHHHHHHHhC
Confidence            34456899999999999999988876

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=92.76  E-value=0.19  Score=43.02  Aligned_cols=75  Identities=20%  Similarity=0.017  Sum_probs=44.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      |||.|+|++|.+|++++-.|..++.  ++.+++++ .....+..+.+-.....+...  ...+++.+.++++|++++.+.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvitaG   77 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIPAG   77 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEeCC
Confidence            5899999999999999999988874  57777765 211111101111011122211  012235678899999887543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00877 purD phosphoribosylamine--glycine ligase

Probab=92.74  E-value=0.43  Score=42.47  Aligned_cols=68  Identities=19%  Similarity=0.173  Sum_probs=45.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~   79 (231)
                      |||+|+|+ |+.+..++.++.+.|+.+.+..-+....+ +     ......++..|..|.+.+.+.++.  +|.++.
T Consensus         1 ~kiliiG~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~d~~~l~~~~~~~~id~vi~   70 (423)
T TIGR00877         1 MKVLVIGN-GGREHALAWKLAQSPLVKYVYVAPGNAGT-A-----RLAKNKNVAISITDIEALVEFAKKKKIDLAVI   70 (423)
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCCccEEEEECCCHHH-h-----hhcccccccCCCCCHHHHHHHHHHhCCCEEEE
Confidence            68999998 77799999999998876665544332110 0     002223455788999998888876  555553

This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.73  E-value=0.2  Score=42.28  Aligned_cols=35  Identities=9%  Similarity=0.065  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      .+++++|.|++|.+|+.++..|++.|.+|+++.|+
T Consensus       158 ~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        158 AGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            36799999998899999999999999988887764

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=92.73  E-value=0.25  Score=42.93  Aligned_cols=37  Identities=22%  Similarity=0.208  Sum_probs=28.5

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHh-CCCC---EEEEEcC
Q 043777            1 MAG-KSNVLVIGAIGRIGYHFTRRSIE-YGHP---KFALIRD   37 (231)
Q Consensus         1 M~~-~~~ilVtGatG~iG~~i~~~L~~-~g~~---v~~~~R~   37 (231)
                      |+. .++|.|.||||.+|+.+++.|.+ ...+   +..+...
T Consensus         1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~   42 (347)
T PRK06728          1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK   42 (347)
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence            553 46999999999999999999985 5666   4555443

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=92.70  E-value=0.62  Score=41.53  Aligned_cols=63  Identities=19%  Similarity=0.115  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .++|+|.|+ |.||+.++..+...|.+|++..+++..   ......  .++..+  +      +.++++++|+++..
T Consensus       202 GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R---~~~A~~--~G~~~~--~------~~e~v~~aDVVI~a  264 (413)
T cd00401         202 GKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPIC---ALQAAM--EGYEVM--T------MEEAVKEGDIFVTT  264 (413)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhh---HHHHHh--cCCEEc--c------HHHHHcCCCEEEEC
Confidence            678999998 999999999999999999888776431   111111  444332  1      23566788887754

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=92.63  E-value=0.61  Score=38.74  Aligned_cols=36  Identities=31%  Similarity=0.319  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCE-EEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPK-FALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v-~~~~R~~~   39 (231)
                      ++||+|.||+|-.|+.+++.+.+.. .++ -++.|..+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            4799999999999999999999876 454 35666653

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=92.62  E-value=0.35  Score=40.88  Aligned_cols=35  Identities=23%  Similarity=0.243  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~   39 (231)
                      .++++|.|| |+.+++++.+|++.| .+++++.|..+
T Consensus       126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~  161 (283)
T COG0169         126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRE  161 (283)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence            478999998 889999999999999 57999999753

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=92.59  E-value=0.27  Score=42.34  Aligned_cols=38  Identities=16%  Similarity=0.125  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSA   39 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~   39 (231)
                      |.+.+||.|+|| |.+|+.++..+...|. ++++++++..
T Consensus         3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~   41 (321)
T PTZ00082          3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKN   41 (321)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCc
Confidence            556789999996 9999999999988885 7888887654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=92.58  E-value=0.29  Score=38.23  Aligned_cols=62  Identities=29%  Similarity=0.297  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++|.|.|. |.||+.+++.|..-|.+|.+.+|....   ......  .++        ...++.++++.+|++++
T Consensus        36 g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~---~~~~~~--~~~--------~~~~l~ell~~aDiv~~   97 (178)
T PF02826_consen   36 GKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKP---EEGADE--FGV--------EYVSLDELLAQADIVSL   97 (178)
T ss_dssp             TSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHH---HHHHHH--TTE--------EESSHHHHHHH-SEEEE
T ss_pred             CCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCCh---hhhccc--ccc--------eeeehhhhcchhhhhhh
Confidence            679999997 999999999999999999999997631   100011  222        12356788899999776

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.55  E-value=0.16  Score=45.45  Aligned_cols=34  Identities=21%  Similarity=0.203  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++++|+|++| +|.++++.|.+.|+.|.+.+++.
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~   38 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKP   38 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCC
Confidence            57899999966 99999999999999999988754

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=92.55  E-value=0.3  Score=33.26  Aligned_cols=32  Identities=25%  Similarity=0.371  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIR   36 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R   36 (231)
                      .++++|.|+ |.+|+.++..|.+. +.++.++.|
T Consensus        23 ~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          23 GKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            578999998 99999999999998 567877777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.35  E-value=0.77  Score=41.31  Aligned_cols=74  Identities=19%  Similarity=0.184  Sum_probs=49.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|.|+ |..|...++.|.++|+.|.+.+++..... ......+. .++.+..+.-.+.+.+...+++.|.++..+
T Consensus         2 ~v~viG~-G~sG~s~a~~l~~~G~~V~~~D~~~~~~~-~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~   76 (459)
T PRK02705          2 IAHVIGL-GRSGIAAARLLKAQGWEVVVSDRNDSPEL-LERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSP   76 (459)
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCchhh-HHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECC
Confidence            6899997 88999999999999999999987653211 11111233 567776554334445556677788877643

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=92.35  E-value=0.24  Score=36.70  Aligned_cols=33  Identities=27%  Similarity=0.392  Sum_probs=27.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~   37 (231)
                      +++|+|.|+ |.+|+.+++.|...|. .+++++.+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence            468999998 8999999999999996 57777665

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.29  E-value=0.23  Score=42.28  Aligned_cols=34  Identities=12%  Similarity=0.108  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +++|+|.|.+|.+|+.++..|+++|++|+++.|.
T Consensus       159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~  192 (301)
T PRK14194        159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSR  192 (301)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCC
Confidence            6899999999999999999999999999998665

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=92.28  E-value=3.3  Score=37.61  Aligned_cols=68  Identities=10%  Similarity=0.044  Sum_probs=44.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|.|+|. |-.|+.++..|.++|++|.+..|+.+.   .+.+.. .. .+..+..  ..+.+++.+.++++|++++
T Consensus         3 ~IgvIGL-G~MG~~lA~nL~~~G~~V~v~dr~~~~---~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil   72 (470)
T PTZ00142          3 DIGLIGL-AVMGQNLALNIASRGFKISVYNRTYEK---TEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVIL   72 (470)
T ss_pred             EEEEEeE-hHHHHHHHHHHHHCCCeEEEEeCCHHH---HHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEE
Confidence            7999996 999999999999999999999997532   111111 11 1322211  2355555555556786654

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.25  E-value=0.24  Score=42.11  Aligned_cols=32  Identities=16%  Similarity=0.111  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI   35 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~   35 (231)
                      +++|+|.|.+|.+|+.++..|+++|++|+++.
T Consensus       158 Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~  189 (296)
T PRK14188        158 GLNAVVIGRSNLVGKPMAQLLLAANATVTIAH  189 (296)
T ss_pred             CCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence            68999999999999999999999999999884

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=92.14  E-value=0.29  Score=41.38  Aligned_cols=35  Identities=31%  Similarity=0.420  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..+++|+||+|.+|..+++.+...|..|++++|+.
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~  197 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP  197 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH
Confidence            46899999999999999999999999998888754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.07  E-value=1.1  Score=40.32  Aligned_cols=72  Identities=18%  Similarity=0.227  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++|+|+|+ |..|.++++.|.++|+.|.+.++..... ..+.++....++.+..+...+     ..+.++|.++.++.
T Consensus         5 ~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~-~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spg   76 (445)
T PRK04308          5 NKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPE-RVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPG   76 (445)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCch-hHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCC
Confidence            578999998 6899999999999999999888654321 011111111366665544321     13356788776544

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=92.05  E-value=0.26  Score=41.68  Aligned_cols=74  Identities=18%  Similarity=0.130  Sum_probs=47.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++++|.|+ |+.|++++..|.+.|. +|+++.|+...  ...+.+.+.   ....+  ...   +++.+.++++|++..
T Consensus       127 ~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~k--a~~la~~l~~~~~~~~~--~~~---~~~~~~~~~aDiVIn  198 (284)
T PRK12549        127 LERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPAR--AAALADELNARFPAARA--TAG---SDLAAALAAADGLVH  198 (284)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHH--HHHHHHHHHhhCCCeEE--Eec---cchHhhhCCCCEEEE
Confidence            468999998 8899999999999996 68899887432  111222221   11222  111   234556778898876


Q ss_pred             cccCCC
Q 043777           80 PSEYGA   85 (231)
Q Consensus        80 ps~~g~   85 (231)
                      .+.-|.
T Consensus       199 aTp~Gm  204 (284)
T PRK12549        199 ATPTGM  204 (284)
T ss_pred             CCcCCC
Confidence            655553

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=92.05  E-value=0.32  Score=41.05  Aligned_cols=35  Identities=26%  Similarity=0.317  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      .++|+|.| .|.+|+++++.|.+.|+.+.++.++.+
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~   37 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRS   37 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCc
Confidence            46777766 699999999999999999999998865

>PRK07574 formate dehydrogenase; Provisional

Probab=92.04  E-value=0.29  Score=43.25  Aligned_cols=63  Identities=25%  Similarity=0.203  Sum_probs=44.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .|+|.|.|. |.||+.+++.|..-|.+|.+..|....   .+....  .++.       -..++.++++.+|++++
T Consensus       192 gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~---~~~~~~--~g~~-------~~~~l~ell~~aDvV~l  254 (385)
T PRK07574        192 GMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLP---EEVEQE--LGLT-------YHVSFDSLVSVCDVVTI  254 (385)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCc---hhhHhh--cCce-------ecCCHHHHhhcCCEEEE
Confidence            578999997 999999999999999999998886421   100011  1221       12357788899998765

>PRK07208 hypothetical protein; Provisional

Probab=92.03  E-value=0.3  Score=44.09  Aligned_cols=37  Identities=32%  Similarity=0.478  Sum_probs=33.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |++.++|+|+|| |.-|...+..|.++|++|+++-+..
T Consensus         1 ~~~~~~vvIiGa-GisGL~aA~~L~~~g~~v~v~E~~~   37 (479)
T PRK07208          1 MTNKKSVVIIGA-GPAGLTAAYELLKRGYPVTVLEADP   37 (479)
T ss_pred             CCCCCcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            777889999998 9999999999999999999987654

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=91.97  E-value=0.71  Score=39.74  Aligned_cols=62  Identities=24%  Similarity=0.269  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++|.|+|- |.+|+.+++.|...|++|++..|... .  .+....  .++.+        .++.++++.+|++.+
T Consensus        16 gKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~-s--~~~A~~--~G~~v--------~sl~Eaak~ADVV~l   77 (335)
T PRK13403         16 GKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGK-S--FEVAKA--DGFEV--------MSVSEAVRTAQVVQM   77 (335)
T ss_pred             cCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcch-h--hHHHHH--cCCEE--------CCHHHHHhcCCEEEE
Confidence            578999996 99999999999999999998877531 1  111111  33322        146778888888664

>PLN02256 arogenate dehydrogenase

Probab=91.97  E-value=0.28  Score=41.86  Aligned_cols=34  Identities=24%  Similarity=0.459  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++|.|.|. |.+|+.+++.|.+.|++|+++.|+.
T Consensus        36 ~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~   69 (304)
T PLN02256         36 KLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSD   69 (304)
T ss_pred             CCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECcc
Confidence            578999995 9999999999999999999988874

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=91.91  E-value=0.85  Score=39.08  Aligned_cols=70  Identities=16%  Similarity=0.108  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      .+.+++.|+|+.| +|+--++.-.+-|++|+++++..++  +.+..+.  -|.+.+..-..|++.+.++.+-.|.
T Consensus       180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~k--keea~~~--LGAd~fv~~~~d~d~~~~~~~~~dg  249 (360)
T KOG0023|consen  180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKK--KEEAIKS--LGADVFVDSTEDPDIMKAIMKTTDG  249 (360)
T ss_pred             CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchh--HHHHHHh--cCcceeEEecCCHHHHHHHHHhhcC
Confidence            3578899999977 9998888888889999999997632  2333333  4555554444478777777665443

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=91.83  E-value=0.48  Score=35.13  Aligned_cols=32  Identities=22%  Similarity=0.238  Sum_probs=26.9

Q ss_pred             EEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDS   38 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~   38 (231)
                      |+|.|+||-||+..++-+.+..  ++|+.++-+.
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~   34 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGS   34 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCC
Confidence            6799999999999999888876  7788777654

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=91.81  E-value=0.15  Score=37.77  Aligned_cols=31  Identities=29%  Similarity=0.523  Sum_probs=26.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI   35 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~   35 (231)
                      .++|.|+|+ |.+|.+|.+.|.+.||.|..+.
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~   40 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVY   40 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEES
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEE
Confidence            578999998 9999999999999999988764

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.76  E-value=0.36  Score=40.78  Aligned_cols=51  Identities=22%  Similarity=0.225  Sum_probs=41.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++++|+|+++.+|+.++..|.+.|..|+++.++.                          ..+.+.++++|+++..
T Consensus       158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------~~l~~~~~~ADIVIsA  208 (286)
T PRK14175        158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------KDMASYLKDADVIVSA  208 (286)
T ss_pred             CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------hhHHHHHhhCCEEEEC
Confidence            68999999999999999999999999998887542                          1355677788887754

>PRK11259 solA N-methyltryptophan oxidase; Provisional

Probab=91.76  E-value=0.29  Score=42.46  Aligned_cols=33  Identities=27%  Similarity=0.248  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      -.|+|+|| |.+|..++.+|.+.|++|+++.|..
T Consensus         4 ~dv~IIGg-Gi~G~s~A~~L~~~g~~V~lie~~~   36 (376)
T PRK11259          4 YDVIVIGL-GSMGSAAGYYLARRGLRVLGLDRFM   36 (376)
T ss_pred             ccEEEECC-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence            45899998 9999999999999999999998864

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=91.69  E-value=0.66  Score=40.83  Aligned_cols=34  Identities=26%  Similarity=0.349  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |||.|.|. |++|.....-|.+.||+|++++.+.+
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~~   34 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDES   34 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCHH
Confidence            68999995 99999999999999999999998754

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=91.62  E-value=0.9  Score=37.66  Aligned_cols=64  Identities=27%  Similarity=0.289  Sum_probs=44.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      |+|+|.|||+ =|+.|++.|.++|+ |.+.+-....   .+..........+..+-+.+.+.+.+.+++
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g---~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~   64 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYG---GELLKPELPGLEVRVGRLGDEEGLAEFLRE   64 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhh---HhhhccccCCceEEECCCCCHHHHHHHHHh
Confidence            6899999988 59999999999998 5543322211   111111114567788888899999998875

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=91.57  E-value=0.41  Score=43.50  Aligned_cols=34  Identities=15%  Similarity=-0.013  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~   38 (231)
                      +|+|.|.|. |++|..++..|.+.|  ++|++++++.
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~   36 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISV   36 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCH
Confidence            368999986 999999999999885  7798888764

>PLN02602 lactate dehydrogenase

Probab=91.52  E-value=2.3  Score=37.10  Aligned_cols=72  Identities=13%  Similarity=0.102  Sum_probs=43.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCc-h-hhhhhhh--hcCCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASN-F-NFSLLRV--FHSGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~-~-~~~~~~~--~~~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      +||.|+|+ |.+|+.++-.|+..+.  ++.+++.+.... . ..++...  +.....+ .+. .|.    +.++++|++.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy----~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDY----AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCH----HHhCCCCEEE
Confidence            59999996 9999999999988874  577777765321 1 1111111  1112222 221 122    3478999988


Q ss_pred             EcccC
Q 043777           79 IPSEY   83 (231)
Q Consensus        79 ~ps~~   83 (231)
                      +.+..
T Consensus       111 itAG~  115 (350)
T PLN02602        111 VTAGA  115 (350)
T ss_pred             ECCCC
Confidence            86544

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=91.38  E-value=0.21  Score=40.73  Aligned_cols=34  Identities=18%  Similarity=0.390  Sum_probs=31.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++..+.||+||+|+.|+..+...||++.-..|+.
T Consensus         3 ~k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsg   36 (283)
T KOG4288|consen    3 PKLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSG   36 (283)
T ss_pred             ccceeecccccchhhhhHHHHhcCceEEEecccc
Confidence            6788999999999999999999999998888865

>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=91.33  E-value=0.27  Score=40.06  Aligned_cols=38  Identities=24%  Similarity=0.373  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |.+.+.|.|.|| |..|+-|++-....|++|.+.+++.+
T Consensus         8 ~~~~~~V~ivGa-G~MGSGIAQv~a~sg~~V~l~d~~~~   45 (298)
T KOG2304|consen    8 MAEIKNVAIVGA-GQMGSGIAQVAATSGLNVWLVDANED   45 (298)
T ss_pred             cccccceEEEcc-cccchhHHHHHHhcCCceEEecCCHH
Confidence            455678999998 99999999999999999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	231
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		3e-28
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		4e-23
1qyd_A	313	Crystal Structures Of Pinoresinol-Lariciresinol And		2e-17
3i52_A	346	Ternary Complex Structure Of Leucoanthocyanidin Red		3e-14
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		3e-09
2r2g_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		9e-09
2qw8_A	314	Structure Of Eugenol Synthase From Ocimum Basilicum		9e-09
2qx7_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		1e-08
3c3x_A	318	The Multiple Phenylpropene Synthases In Both Clarki		1e-08

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 141/314 (44%), Gaps = 89/314 (28%)
Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFN---FSLLRVFH-SGVFD 56
           M  +S +L+IGA G IG H  + S++ GHP F L+R+S ++ N     LL  F  SG   
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60
Query: 57  YWGLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGA---G 86
             G ++D  SL+EAVK VDV                           RF PSE+G     
Sbjct: 61  VHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN 120
Query: 87  VFVKDTDVAAFTINALDDPRTLNKLLHLREISHTF------------NMESSGEL----- 129
           V   +   + F + A      + + +    I +T+            ++  +G       
Sbjct: 121 VHAVEPAKSVFEVKA-----KVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRD 175
Query: 130 ------DGTKLYPHLKYTTISDYLDTSV--PR-----------GNIYSFNDLVSLWEEKI 170
                 DG      +K   I  +   +V  PR            N  S N+LV+LWE+KI
Sbjct: 176 KVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI 235
Query: 171 GKALDRVYVAEDQLLK-------------NIQEKARVLGDQTNFEIEPSFGVEATELYPD 217
            K L++ YV E+++LK              I     V GDQTNFEI P+ GVEA++LYPD
Sbjct: 236 DKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPD 294
Query: 218 VNYTTVDEYLNQFI 231
           V YTTVDEYL+ F+
Sbjct: 295 VKYTTVDEYLSNFV 308

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 88/311 (28%)
Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNF----SLLRVFHS-GVFDYW 58
           ++ +L++G  G IG H    SI+ G+P +AL+R + +  N      L+  + S GV    
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61
Query: 59  GLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGVFVKD 91
           G + D ++L++A+KQVD+                           +F PSE+  G+ V  
Sbjct: 62  GDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEF--GLDVDR 119
Query: 92  TDVAAFTINALDDPRTLNKLLHLREISHTFN---------MESSGELDGTKLYPHLKYTT 142
            D         ++  ++ +++    + +T+          + +  +LD T   P  K   
Sbjct: 120 HDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDP-PRDKVVI 178
Query: 143 ISD-------------------------YLDTSV----PRGNIYSFNDLVSLWEEKIGKA 173
           + D                          L+ +V    P+ N  + N++++LWE+KIGK 
Sbjct: 179 LGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPK-NYLTQNEVIALWEKKIGKT 237
Query: 174 LDRVYVAEDQLLKNIQEKA-------------RVLGDQTNFEIEPSFGVEATELYPDVNY 220
           L++ YV+E+Q+LK+IQE +             ++ GD   +EI+P+  +EA+E YPDV Y
Sbjct: 238 LEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAV-YEIDPAKDIEASEAYPDVTY 296
Query: 221 TTVDEYLNQFI 231
           TT DEYLNQF+
Sbjct: 297 TTADEYLNQFV 307

>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 133/315 (42%), Gaps = 86/315 (27%)
Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR-DSASNFN-FSLLRVFHS-GVFDY 57
           M  KS VL++G  G IG      SI  GHP + L R +  SN +   +L  F   G    
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60
Query: 58  WGLLEDEKSLLEAVKQVDV-------------------------------RFIPSEYGAG 86
              L+D + L++A+KQVDV                               RF+PSE+G  
Sbjct: 61  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD 120
Query: 87  VFVKDTDVAAFTINALDDPRTLNKLLHLREISHTF---NM------ESSGELDGTKLYPH 137
             + +  +   +I  +D  R + + +    I +T+   NM       S  +LDG  + P 
Sbjct: 121 PDIMEHALQPGSITFIDK-RKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPR 179
Query: 138 LKYTTISD---------------YLDTSV-------------PRGNIYSFNDLVSLWEEK 169
            K     D               Y   S+             P  NI S  +++ +WE  
Sbjct: 180 DKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERL 239
Query: 170 IGKALDRVYVAEDQLLKNIQEKA---RVL----------GDQTNFEIEPSFGVEATELYP 216
             + LD++Y++    L ++++K+   +++          GD  NFEI P+  +EAT+LYP
Sbjct: 240 SEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIEATKLYP 298
Query: 217 DVNYTTVDEYLNQFI 231
           +V Y T+D YL +++
Sbjct: 299 EVKYVTMDSYLERYV 313

>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 49/157 (31%)
Query: 88  FVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYL 147
           FV  TD+  FT+  +DD RTLNK +H R                                
Sbjct: 195 FVAGTDIGKFTMKTVDDVRTLNKSVHFR-------------------------------- 222
Query: 148 DTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLL----KNIQEKARVL-------- 195
               P  N  + N+L S+WE+KIG+ L RV V ED LL    +NI  ++ V         
Sbjct: 223 ----PSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFI 278
Query: 196 -GDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
            G Q NF I+    VE T LYP+ ++ TV+E   ++I
Sbjct: 279 KGCQVNFSIDGPEDVEVTTLYPEDSFRTVEECFGEYI 315

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 54/166 (32%)
Query: 83  YGAG----VFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHL 138
           YG G    V   + D+A +TI    DPR  N+++  R                       
Sbjct: 180 YGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYR----------------------- 216
Query: 139 KYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKAR----- 193
                        P  NI S N+L+SLWE K G +  +V++ ++QL++  QE  +     
Sbjct: 217 -------------PPKNIISQNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQPQNIP 263
Query: 194 --------VLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
                   V GD  ++E+     +EA+ LYP++ +T++D  L+ FI
Sbjct: 264 VSILHSIFVKGDLMSYEMRKD-DIEASNLYPELEFTSIDGLLDLFI 308

>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 75/300 (25%)
Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS-GVFDYWGLLE 62
           KS +L+ G  G IG H  + S++ GHP +   R ++S    +LL  F S G     G L+
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT--TLLDEFQSLGAIIVKGELD 68
Query: 63  DEKSLLEAVKQVDV---------------------------RFIPSEYGAG--------- 86
           + + L+E +K+VDV                           RF+PS++G           
Sbjct: 69  EHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPP 128
Query: 87  --VFVKDTDVAAFTINALDDPRT-----------LNKLLHLREISHTFNMESSGELDGTK 133
               ++   +    I   + P T           +N LL   +      +  +GE     
Sbjct: 129 FEALIERQRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAM 188
Query: 134 LYPH------LKYTTISDYLDTSV---PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQ- 183
            Y        +K  T    L+  V   P  NI +  +L+S WE+KIGK   +++V E++ 
Sbjct: 189 NYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEI 248
Query: 184 --LLKNIQEKARVL----------GDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
             L K + E   +           G   +++ + +  VEA+ LYP++ +TT+DE L+ F+
Sbjct: 249 VALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDELLDIFV 307

>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 75/300 (25%)
Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS-GVFDYWGLLE 62
           KS +L+ G  G IG H  + S++ GHP +   R ++S    +LL  F S G     G L+
Sbjct: 7   KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT--TLLDEFQSLGAIIVKGELD 64
Query: 63  DEKSLLEAVKQVDV---------------------------RFIPSEYGAG--------- 86
           + + L+E +K+VDV                           RF+PS++G           
Sbjct: 65  EHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPP 124
Query: 87  --VFVKDTDVAAFTINALDDPRT-----------LNKLLHLREISHTFNMESSGELDGTK 133
               ++   +    I   + P T           +N LL   +      +  +GE     
Sbjct: 125 FEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAM 184
Query: 134 LYPH------LKYTTISDYLDTSV---PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQ- 183
            Y        +K  T    L+  V   P  NI +  +L+S WE+KIGK   +++V E++ 
Sbjct: 185 NYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEI 244
Query: 184 --LLKNIQEKARVL----------GDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
             L K + E   +           G   +++ + +  VEA+ LYP++ +TT+DE L+ F+
Sbjct: 245 VALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDELLDIFV 303

>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 75/300 (25%)
Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS-GVFDYWGLLE 62
           KS +L+ G  G IG H  + S++ GHP +   R ++S    +LL  F S G     G L+
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT--TLLDEFQSLGAIIVKGELD 68
Query: 63  DEKSLLEAVKQVDV---------------------------RFIPSEYGAG--------- 86
           + + L+E +K+VDV                           RF+PS++G           
Sbjct: 69  EHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPP 128
Query: 87  --VFVKDTDVAAFTINALDDPRT-----------LNKLLHLREISHTFNMESSGELDGTK 133
               ++   +    I   + P T           +N LL   +      +  +GE     
Sbjct: 129 FEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAM 188
Query: 134 LYPH------LKYTTISDYLDTSV---PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQ- 183
            Y        +K  T    L+  V   P  NI +  +L+S WE+KIGK   +++V E++ 
Sbjct: 189 NYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEI 248
Query: 184 --LLKNIQEKARVL----------GDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
             L K + E   +           G   +++ + +  VEA+ LYP++ +TT+DE L+ F+
Sbjct: 249 VALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDELLDIFV 307

>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 75/300 (25%)
Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS-GVFDYWGLLE 62
           KS +L+ G  G IG H  + S++ GHP +   R ++S    +LL  F S G     G L+
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT--TLLDEFQSLGAIIVKGELD 68
Query: 63  DEKSLLEAVKQVDV---------------------------RFIPSEYGAG--------- 86
           + + L+E +K+VDV                           RF+PS++G           
Sbjct: 69  EHEKLVELMKKVDVVISALAVPQYLDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPP 128
Query: 87  --VFVKDTDVAAFTINALDDPRT-----------LNKLLHLREISHTFNMESSGELDGTK 133
               ++   +    I   + P T           +N LL   +      +  +GE     
Sbjct: 129 FEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAM 188
Query: 134 LYPH------LKYTTISDYLDTSV---PRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQ- 183
            Y        +K  T    L+  V   P  NI +  +L+S WE+KIGK   +++V E++ 
Sbjct: 189 NYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEI 248
Query: 184 --LLKNIQEKARVL----------GDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
             L K + E   +           G   +++ + +  VEA+ LYP++ +TT+DE L+ F+
Sbjct: 249 VALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDELLDIFV 307

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	231
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	9e-34
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-31
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-30
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	7e-28
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-08
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-04
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-27
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	4e-11
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-23
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-08
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	1e-06
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-05
1xq6_A	253	Unknown protein; structural genomics, protein stru	9e-05
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-04
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-04
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	5e-04
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	6e-04

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score =  122 bits (307), Expect = 9e-34
 Identities = 73/315 (23%), Positives = 121/315 (38%), Gaps = 86/315 (27%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN---FNFSLLRVFHSGVFDY 57
           M  KS VL++G  G IG      SI  GHP + L R    +       LL     G    
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60

Query: 58  WGLLEDEKSLLEAVKQVDV-------------------------------RFIPSEYGAG 86
              L+D + L++A+KQVDV                               RF+PSE+G  
Sbjct: 61  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD 120

Query: 87  VFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESS---------GELDGTKLYPH 137
             + +  +         D R + + +    I +T+   +           +LDG  + P 
Sbjct: 121 PDIMEHALQPG-SITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPR 179

Query: 138 LK------------YTTISD---------YLDTSVPR-------GNIYSFNDLVSLWEEK 169
            K            +    D             ++ +        NI S  +++ +WE  
Sbjct: 180 DKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERL 239

Query: 170 IGKALDRVYVAEDQLLKNIQEKAR-------------VLGDQTNFEIEPSFGVEATELYP 216
             + LD++Y++    L ++++K+                GD  NFEI P+  +EAT+LYP
Sbjct: 240 SEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEIGPN-AIEATKLYP 298

Query: 217 DVNYTTVDEYLNQFI 231
           +V Y T+D YL +++
Sbjct: 299 EVKYVTMDSYLERYV 313

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score =  115 bits (289), Expect = 3e-31
 Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 84/309 (27%)

Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFS-----LLRVFHSGVFDYW 58
           ++ +L++G  G IG H    SI+ G+P +AL+R + +  N       +      GV    
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLE 61

Query: 59  GLLEDEKSLLEAVKQVDV---------------------------RFIPSEYGAGVFVKD 91
           G + D ++L++A+KQVD+                           +F PSE+G  V    
Sbjct: 62  GDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVD--R 119

Query: 92  TDVAAFTINALDDPRTLNKLLHLREISHTFN-----MESSGELDGTKLYPHLK------- 139
            D         ++  ++ +++    + +T+                              
Sbjct: 120 HDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVIL 179

Query: 140 --------YTTISDYLDTSV----------------PRGNIYSFNDLVSLWEEKIGKALD 175
                   Y T +D    ++                   N  + N++++LWE+KIGK L+
Sbjct: 180 GDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLE 239

Query: 176 RVYVAEDQLLKNIQEKAR-------------VLGDQTNFEIEPSFGVEATELYPDVNYTT 222
           + YV+E+Q+LK+IQE +              + GD   +EI+P+  +EA+E YPDV YTT
Sbjct: 240 KTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAV-YEIDPAKDIEASEAYPDVTYTT 298

Query: 223 VDEYLNQFI 231
            DEYLNQF+
Sbjct: 299 ADEYLNQFV 307

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  113 bits (284), Expect = 3e-30
 Identities = 65/306 (21%), Positives = 117/306 (38%), Gaps = 87/306 (28%)

Query: 4   KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLED 63
           KS +L+ G  G IG H  + S++ GHP +   R ++S     L      G     G L++
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK-TTLLDEFQSLGAIIVKGELDE 69

Query: 64  EKSLLEAVKQVDV---------------------------RFIPSEYGA--------GVF 88
            + L+E +K+VDV                           RF+PS++G           F
Sbjct: 70  HEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPF 129

Query: 89  VKDTDVAAFTINALDDPRT--------------LNKLLHLREISHTFNMESSGELDGTKL 134
               +       A+++                 +N LL   +      +  +GE    K 
Sbjct: 130 EALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGE---AKF 186

Query: 135 YPHLKYTTISD---------YLDTSVPR-------GNIYSFNDLVSLWEEKIGKALDRVY 178
                     D             ++ R        NI +  +L+S WE+KIGK   +++
Sbjct: 187 A----MNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIH 242

Query: 179 VAEDQLLKNIQEKAR-------------VLGDQTNFEIEPSFGVEATELYPDVNYTTVDE 225
           V E++++   +E                + G   +++ + +  VEA+ LYP++ +TT+DE
Sbjct: 243 VPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDE 301

Query: 226 YLNQFI 231
            L+ F+
Sbjct: 302 LLDIFV 307

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score =  107 bits (268), Expect = 7e-28
 Identities = 50/196 (25%), Positives = 69/196 (35%), Gaps = 49/196 (25%)

Query: 49  VFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTL 108
                    W    +             +          FV  TD+  FT+  +DD RTL
Sbjct: 156 YICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTL 215

Query: 109 NKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEE 168
           NK +H R                                    P  N  + N+L S+WE+
Sbjct: 216 NKSVHFR------------------------------------PSCNCLNINELASVWEK 239

Query: 169 KIGKALDRVYVAEDQLLKNIQEKAR-------------VLGDQTNFEIEPSFGVEATELY 215
           KIG+ L RV V ED LL    E                + G Q NF I+    VE T LY
Sbjct: 240 KIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLY 299

Query: 216 PDVNYTTVDEYLNQFI 231
           P+ ++ TV+E   ++I
Sbjct: 300 PEDSFRTVEECFGEYI 315

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 52.3 bits (125), Expect = 3e-08
 Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 2  AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD-SASNFNFSLLRVFHS-GVFDYWG 59
          + K  VL+ GA G IG      S++   P + L R    S     + +     G    +G
Sbjct: 8  SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYG 67

Query: 60 LLEDEKSLLEAVKQVDVRFIPS 81
          L+ +++++ + +K+ ++  + S
Sbjct: 68 LINEQEAMEKILKEHEIDIVVS 89

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 6/33 (18%), Positives = 17/33 (51%)

Query: 121 FNMESSGELDGTKLYPHLKYTTISDYLDTSVPR 153
           F+++   +++ T LYP   + T+ +     + +
Sbjct: 285 FSIDGPEDVEVTTLYPEDSFRTVEECFGEYIVK 317

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  104 bits (262), Expect = 3e-27
 Identities = 72/196 (36%), Positives = 95/196 (48%), Gaps = 50/196 (25%)

Query: 49  VFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINALDDPRTL 108
              S  F  + L    ++ L A  +  V  +       VFVK+ D+  FTI A+DDPRTL
Sbjct: 150 YVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTL 209

Query: 109 NKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLWEE 168
           NK L+LR                                       N  S N+LV+LWE+
Sbjct: 210 NKTLYLR------------------------------------LPANTLSLNELVALWEK 233

Query: 169 KIGKALDRVYVAEDQLLKNIQEKAR-------------VLGDQTNFEIEPSFGVEATELY 215
           KI K L++ YV E+++LK I +                V GDQTNFEI P+ GVEA++LY
Sbjct: 234 KIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLY 292

Query: 216 PDVNYTTVDEYLNQFI 231
           PDV YTTVDEYL+ F+
Sbjct: 293 PDVKYTTVDEYLSNFV 308

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 60.7 bits (147), Expect = 4e-11
 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 1  MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFS----LLRVFHSGVFD 56
          M  +S +L+IGA G IG H  + S++ GHP F L+R+S ++ N      L     SG   
Sbjct: 1  MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60

Query: 57 YWGLLEDEKSLLEAVKQVDV 76
            G ++D  SL+EAVK VDV
Sbjct: 61 VHGSIDDHASLVEAVKNVDV 80

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 95.4 bits (237), Expect = 1e-23
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 50/158 (31%)

Query: 87  VFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDY 146
           V   + D+A +TI    DPR  N+++  R                               
Sbjct: 188 VLNYEEDIAKYTIKVACDPRCCNRIVIYR------------------------------- 216

Query: 147 LDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKAR------------- 193
                P  NI S N+L+SLWE K G +  +V++ ++QL++  QE  +             
Sbjct: 217 -----PPKNIISQNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQPQNIPVSILHSIF 271

Query: 194 VLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
           V GD  ++E+     +EA+ LYP++ +T++D  L+ FI
Sbjct: 272 VKGDLMSYEMRKD-DIEASNLYPELEFTSIDGLLDLFI 308

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 53.4 bits (128), Expect = 1e-08
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 4  KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS----GVFDYWG 59
             +++ G  G IG    R S+ + HP F   R    +   S +++       GV    G
Sbjct: 4  MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEG 63

Query: 60 LLEDEKSLLEAVKQVDV 76
           +E+ + ++  +KQVD+
Sbjct: 64 EMEEHEKMVSVLKQVDI 80

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 10/101 (9%)

Query: 1   MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGL 60
           M     +++IGA G +G      ++  G    A++R          +++ +  +      
Sbjct: 1   MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK------IKIENEHLKVKKAD 54

Query: 61  LEDEKSLLEAVKQVDVRFIPSEYGAGVFVKDTDVAAFTINA 101
           +     + E  K  D               + D+   TI  
Sbjct: 55  VSSLDEVCEVCKGADAVISA----FNPGWNNPDIYDETIKV 91

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 1  MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGL 60
          MA K  + + GA G+ G     ++++ G+    L+RDS+      L            G 
Sbjct: 1  MAVK-KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS-----RLPSEGPRPAHVVVGD 54

Query: 61 LEDEKSLLEAVKQVDV 76
          +     + + V   D 
Sbjct: 55 VLQAADVDKTVAGQDA 70

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 41.4 bits (97), Expect = 9e-05
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 8/77 (10%)

Query: 2  AGKSNVLVIGAIGRIGYHFTRRSIEYGHPK--FALIRDSASNFNFSLLRVFHSGVFDYWG 59
          A    VLV GA GR G    ++  E         L+R +                  + G
Sbjct: 2  ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG------KEKIGGEADVFIG 55

Query: 60 LLEDEKSLLEAVKQVDV 76
           + D  S+  A + +D 
Sbjct: 56 DITDADSINPAFQGIDA 72

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 6  NVLVIGAIGRIGYHFTRRSI-EYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE 64
           + ++GA G+I    T   +           R   +     ++      V +  G  ++ 
Sbjct: 7  YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIE--GSFQNP 64

Query: 65 KSLLEAVKQVDV 76
            L +AV   +V
Sbjct: 65 GXLEQAVTNAEV 76

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 6/71 (8%)

Query: 6  NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK 65
           VLV+GA G++  +        GH   A++R+           +   G  D   +   E+
Sbjct: 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE-----QGPELRERGASD-IVVANLEE 76

Query: 66 SLLEAVKQVDV 76
              A   +D 
Sbjct: 77 DFSHAFASIDA 87

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 7  VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRV-FHSGVFDYWGLLEDEK 65
            V+GA G +G+H  R     GH    + R S+     + L         +    + D  
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVA--E----MLDHA 69

Query: 66 SLLEAVKQVDV 76
           L  A++ +D 
Sbjct: 70 GLERALRGLDG 80

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 9/71 (12%), Positives = 26/71 (36%), Gaps = 6/71 (8%)

Query: 6  NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK 65
           + ++G+ GR+G    +      +  +A  R       ++ ++  H  V          +
Sbjct: 2  KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDW------TPE 55

Query: 66 SLLEAVKQVDV 76
           + + +  +D 
Sbjct: 56 EMAKQLHGMDA 66

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 9/99 (9%)

Query: 6   NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK 65
            + V+GA GR G      +   GH   A++RD              + V     + E   
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ-----KAADRLGATVAT--LVKEPLV 54

Query: 66  SLLEAVKQVDVRF--IPSEYGAGVFVKDTDVAAFTINAL 102
                +  VD     +   +G+G      D A   ++ L
Sbjct: 55  LTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLL 93

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 6  NVLVIGAIGRIGYHFTRR-SIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE 64
          NVL++GA G+I  H   + + +    +    R  A      + + + +      G + + 
Sbjct: 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPA-----KIHKPYPTNSQIIMGDVLNH 79

Query: 65 KSLLEAVKQVDV 76
           +L +A++  D+
Sbjct: 80 AALKQAMQGQDI 91

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	231
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.93
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.93
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.91
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.9
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.9
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.88
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.81
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.74
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.65
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.65
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.61
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.6
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.59
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.55
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.55
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.5
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.5
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.47
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.45
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.43
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.43
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.43
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.43
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.41
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.41
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.4
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.37
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.36
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.35
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.35
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.33
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.33
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.32
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.31
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.3
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.3
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.29
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.29
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.28
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.27
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.24
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.23
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.23
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.22
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.22
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.21
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.19
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.18
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.18
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.18
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.16
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.16
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.15
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.13
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.13
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.13
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.12
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.11
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.11
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.1
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.1
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.1
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.09
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.07
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.07
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.05
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.05
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.04
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.04
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.03
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.03
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.03
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.03
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.03
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.02
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.01
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.01
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.01
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	98.99
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	98.99
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	98.98
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.98
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	98.97
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	98.97
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	98.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.97
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.96
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	98.96
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	98.96
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	98.96
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	98.96
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	98.94
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	98.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.93
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	98.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	98.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.92
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.92
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.92
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.92
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	98.92
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.92
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.91
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	98.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	98.91
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	98.91
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	98.91
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.91
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	98.9
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.89
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	98.89
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.89
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	98.89
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	98.89
3imf_A	257	Short chain dehydrogenase; structural genomics, in	98.88
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	98.88
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.88
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.88
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.88
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	98.88
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	98.88
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.88
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.88
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	98.88
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.88
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.88
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.88
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	98.88
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.88
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.87
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.87
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.87
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	98.87
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.87
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.87
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	98.87
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	98.86
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	98.86
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	98.86
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.86
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.86
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	98.86
3cxt_A	291	Dehydrogenase with different specificities; rossma	98.86
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.86
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	98.85
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.85
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	98.85
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.85
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.85
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.85
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	98.85
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	98.85
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	98.85
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	98.85
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.85
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	98.85
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	98.85
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.84
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	98.84
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	98.84
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.84
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.84
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	98.84
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	98.84
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	98.84
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.84
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	98.84
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.84
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	98.84
1xq1_A	266	Putative tropinone reducatse; structural genomics,	98.84
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.84
1spx_A	278	Short-chain reductase family member (5L265); paral	98.84
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.83
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.83
3rih_A	293	Short chain dehydrogenase or reductase; structural	98.83
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.83
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.83
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	98.82
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	98.82
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	98.82
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.82
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.82
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	98.82
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.82
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.82
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	98.82
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.81
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	98.81
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	98.81
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	98.81
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.81
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.81
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	98.81
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.81
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.8
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	98.8
1xkq_A	280	Short-chain reductase family member (5D234); parra	98.8
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.8
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.8
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	98.79
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.79
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	98.79
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.79
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.79
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	98.79
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.79
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	98.79
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	98.78
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.78
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	98.78
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.78
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	98.78
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	98.78
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	98.78
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	98.78
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.78
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.78
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	98.78
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	98.77
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	98.77
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	98.77
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	98.77
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	98.77
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	98.77
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.76
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	98.76
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	98.76
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	98.76
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.75
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.75
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.74
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	98.74
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	98.74
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	98.74
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	98.74
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.73
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	98.73
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	98.73
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	98.72
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.72
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.72
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.72
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	98.72
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	98.72
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.72
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	98.71
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	98.71
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	98.71
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	98.7
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	98.7
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	98.69
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	98.69
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.69
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.69
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.69
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	98.68
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	98.68
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	98.68
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.68
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.68
4e4y_A	244	Short chain dehydrogenase family protein; structur	98.68
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	98.68
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	98.67
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	98.66
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	98.66
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.66
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.66
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.65
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	98.64
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	98.64
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.64
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.63
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	98.63
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	98.61
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.59
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	98.58
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	98.58
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.57
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	98.57
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.57
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	98.56
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.55
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.54
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	98.53
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.51
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.49
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.49
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.46
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	98.44
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.44
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.39
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	98.38
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.34
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	98.31
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.31
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.27
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.2
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.2
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.2
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.18
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	98.18
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.1
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.09
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.09
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.05
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.04
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.02
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.02
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.96
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.95
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.9
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.9
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.86
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.85
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	97.8
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.79
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.78
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	97.74
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.74
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	97.72
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.65
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.61
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.53
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.53
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.51
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.5
1lnq_A	336	MTHK channels, potassium channel related protein;	97.48
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.44
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	97.44
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	97.43
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.32
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.31
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.31
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	97.29
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.21
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.13
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.12
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.11
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.11
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.11
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.06
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.01
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.97
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.97
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.94
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.94
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	96.94
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.87
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.87
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.82
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.73
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.73
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	96.7
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.64
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.58
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.56
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.55
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.54
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.53
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.51
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.42
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.4
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.38
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.37
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.35
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.35
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.34
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.29
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.28
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.26
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.24
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.21
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.15
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.1
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.08
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.08
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.07
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.05
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.04
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.01
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.0
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.0
4ezb_A	317	Uncharacterized conserved protein; structural geno	95.97
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	95.95
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	95.94
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.94
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	95.92
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.87
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	95.85
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	95.85
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	95.82
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	95.82
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.8
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.8
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.79
4dim_A	403	Phosphoribosylglycinamide synthetase; structural g	95.77
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	95.75
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	95.74
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.72
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.69
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	95.67
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.67
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.63
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	95.61
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.57
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	95.55
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	95.55
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	95.5
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	95.42
4eye_A	342	Probable oxidoreductase; structural genomics, niai	95.41
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	95.4
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	95.39
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	95.39
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	95.39
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	95.38
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	95.38
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	95.37
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	95.36
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.36
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	95.35
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	95.34
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.33
3gms_A	340	Putative NADPH:quinone reductase; structural genom	95.3
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.3
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.3
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	95.3
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	95.26
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	95.23
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	95.22
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	95.18
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.15
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	95.14
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.13
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	95.12
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	95.12
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.12
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.12
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	95.11
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	95.11
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.1
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	95.06
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	95.03
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	95.03
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	94.98
3ouz_A	446	Biotin carboxylase; structural genomics, center fo	94.92
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.91
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	94.9
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	94.85
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	94.83
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	94.79
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	94.75
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	94.74
3aw8_A	369	PURK, phosphoribosylaminoimidazole carboxylase, AT	94.74
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	94.74
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	94.74
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.73
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	94.7
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	94.69
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	94.65
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	94.64
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	94.62
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	94.61
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	94.58
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	94.58
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	94.57
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	94.55
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	94.54
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	94.54
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	94.46
1c0p_A	363	D-amino acid oxidase; alpha-beta-alpha motif, flav	94.45
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	94.42
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	94.42
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	94.4
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	94.37
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	94.35
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	94.33
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	94.31
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	94.3
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	94.28
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	94.27
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	94.24
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	94.21
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	94.2
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.18
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	94.15
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	94.12
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	94.06
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	94.06
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	94.06
3tl2_A	315	Malate dehydrogenase; center for structural genomi	94.06
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	94.05
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	94.03
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.02
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	94.0

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.93  E-value=1.9e-25  Score=191.40  Aligned_cols=222  Identities=26%  Similarity=0.466  Sum_probs=136.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc--cCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK--QVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~--~~d~~f~   79 (231)
                      +|+|+||||||+||++|+++|++.|++|++++|+.+..+ +.+.+..+. .++.++.+|++|.+++.++++  ++|++++
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            468999999999999999999999999999999864332 233333444 789999999999999999999  8998554


Q ss_pred             ---------------------------cccCCCcce-eec-hhHH-----HHHHH-hhcCccccCceEEEe-----e---
Q 043777           80 ---------------------------PSEYGAGVF-VKD-TDVA-----AFTIN-ALDDPRTLNKLLHLR-----E---  116 (231)
Q Consensus        80 ---------------------------ps~~g~~~~-~~~-~di~-----~~~~~-~~~~~~~~~~~~~~~-----~---  116 (231)
                                                 +|.||...- .+. ....     +..+. .+.+ .... ...++     +   
T Consensus        90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-~g~~-~tivrpg~~~g~~~  167 (346)
T 3i6i_A           90 TVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEE-SGIP-FTYICCNSIASWPY  167 (346)
T ss_dssp             CCCGGGGGGHHHHHHHHHHHCCCSEEECSCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-TTCC-BEEEECCEESSCCC
T ss_pred             CCchhhHHHHHHHHHHHHHcCCceEEeecccCCCCCccCcCCCcchHHHHHHHHHHHHHH-cCCC-EEEEEecccccccC
Confidence                                       444443100 000 0000     11111 1110 0010 01111     0   


Q ss_pred             -----------eeeeeeecCCCCcccccccCC---------ccccc-ccccccccCC-CCCccCHHHHHHHHHHHcCCcc
Q 043777          117 -----------ISHTFNMESSGELDGTKLYPH---------LKYTT-ISDYLDTSVP-RGNIYSFNDLVSLWEEKIGKAL  174 (231)
Q Consensus       117 -----------~~~~~~~~~~g~~~~~~~~~~---------~~~~~-~~~~~~~~~~-~~~~lt~~el~~~~~~~~G~~~  174 (231)
                                 ....+...++|......++..         ...+. .++.  +... +++.+|++|+++.+++++|+++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~--~~i~g~~~~~s~~e~~~~~~~~~g~~~  245 (346)
T 3i6i_A          168 YNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKS--VHFRPSCNCLNINELASVWEKKIGRTL  245 (346)
T ss_dssp             SCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEE--EECCCGGGEECHHHHHHHHHHHHTSCC
T ss_pred             ccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeE--EEEeCCCCCCCHHHHHHHHHHHHCCCC
Confidence                       000111122332211111110         00000 0111  1112 3689999999999999999999


Q ss_pred             eEEeecHHHHHHhhhhc-------------eeeecceeeeecC-CCccccccccCCCCcccCHHHHHhhh
Q 043777          175 DRVYVAEDQLLKNIQEK-------------ARVLGDQTNFEIE-PSFGVEATELYPDVNYTTVDEYLNQF  230 (231)
Q Consensus       175 ~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~l~~~  230 (231)
                      ++.++|.+++.+.+...             .+..|+...|++. +. +.+.+++|||++++|++|||+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~p~~~~t~~~e~l~~~  314 (346)
T 3i6i_A          246 PRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPE-DVEVTTLYPEDSFRTVEECFGEY  314 (346)
T ss_dssp             CEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTT-EEEHHHHSTTCCCCCHHHHHHHH
T ss_pred             ceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCC-cccHHHhCCCCCcCcHHHHHHHH
Confidence            99999999997776543             3344555557773 33 57789999999999999999986

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.93  E-value=4e-25  Score=185.95  Aligned_cols=229  Identities=38%  Similarity=0.599  Sum_probs=133.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc--h-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN--F-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~--~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |+++|+|+||||||++|++++++|+++|++|++++|+.+..  + +.+.+..+. .++.++.+|++|++++.++++++|+
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~   80 (308)
T 1qyc_A            1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDV   80 (308)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCE
Confidence            76678999999999999999999999999999999986432  2 222233333 7899999999999999999999998


Q ss_pred             EEEc---------------------------ccCCCcce-eec-hh-HHHH----HHHhhcCccccCceEEEee------
Q 043777           77 RFIP---------------------------SEYGAGVF-VKD-TD-VAAF----TINALDDPRTLNKLLHLRE------  116 (231)
Q Consensus        77 ~f~p---------------------------s~~g~~~~-~~~-~d-i~~~----~~~~~~~~~~~~~~~~~~~------  116 (231)
                      +|+.                           |.+|...- ... .. ...|    .+.......... ...++.      
T Consensus        81 vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~-~~~~r~~~~~~~  159 (308)
T 1qyc_A           81 VISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIP-YTYVSSNCFAGY  159 (308)
T ss_dssp             EEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCC-BEEEECCEEHHH
T ss_pred             EEECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHHHHHHHHHHHHHhcCCC-eEEEEeceeccc
Confidence            6653                           23331000 000 00 0111    010000000000 011110      


Q ss_pred             -------------eeeeeeecCCCCcccccccCC----cc---ccccccccc-ccCC-CCCccCHHHHHHHHHHHcCCcc
Q 043777          117 -------------ISHTFNMESSGELDGTKLYPH----LK---YTTISDYLD-TSVP-RGNIYSFNDLVSLWEEKIGKAL  174 (231)
Q Consensus       117 -------------~~~~~~~~~~g~~~~~~~~~~----~~---~~~~~~~~~-~~~~-~~~~lt~~el~~~~~~~~G~~~  174 (231)
                                   ....+...+.+......+...    ..   +..-..... +... +++.+|++|+++.+++++|+++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~  239 (308)
T 1qyc_A          160 FLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL  239 (308)
T ss_dssp             HTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCC
T ss_pred             cccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCC
Confidence                         000111112222111111100    00   000000111 1222 2478999999999999999999


Q ss_pred             eEEeecHHHHHHhhhhc-------------eeeecceeeeecCCCccccccccCCCCcccCHHHHHhhhC
Q 043777          175 DRVYVAEDQLLKNIQEK-------------ARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQFI  231 (231)
Q Consensus       175 ~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~  231 (231)
                      .+.++|.+++.+.+...             .+..|....|.+++. +.+.+++||+++++|+||||++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~t~~~~l~~~~  308 (308)
T 1qyc_A          240 EKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-GVEASQLYPDVKYTTVDEYLSNFV  308 (308)
T ss_dssp             EEEEECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTT-EEEHHHHCTTCCCCCHHHHHHTTC
T ss_pred             ceEeCCHHHHHHHHhcCCCchhhHHHhhhheeecCcccccccCCc-cccHHhhCCCcccccHHHHHHHhC
Confidence            99999999988766442             122233223444432 346789999999999999999986

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.91  E-value=1.7e-23  Score=175.91  Aligned_cols=225  Identities=32%  Similarity=0.547  Sum_probs=129.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC-C-c--hhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA-S-N--FNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~-~-~--~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      +|+|+||||||+||++++++|+++|++|++++|+.+ . .  .+.+.+..+. .+++++.+|++|++++.++++++|+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            468999999999999999999999999999999862 1 1  1111222333 689999999999999999999999866


Q ss_pred             Ecc---------------------------cCCCcce-eec-hh-HHHH----HHHhhcCccccCceEEEee--------
Q 043777           79 IPS---------------------------EYGAGVF-VKD-TD-VAAF----TINALDDPRTLNKLLHLRE--------  116 (231)
Q Consensus        79 ~ps---------------------------~~g~~~~-~~~-~d-i~~~----~~~~~~~~~~~~~~~~~~~--------  116 (231)
                      +..                           .+|...- ... .. ...|    .+.......... ...+..        
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~i~-~~~lrp~~~~~~~~  160 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVEPVRQVFEEKASIRRVIEAEGVP-YTYLCCHAFTGYFL  160 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCC-BEEEECCEETTTTG
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEeecccccCcccccCCCcchhHHHHHHHHHHHHHHcCCC-eEEEEcceeecccc
Confidence            533                           2221000 000 00 1111    111000000000 000100        


Q ss_pred             -----------eeeeeeecCCCCcccccccCC----cc---ccccccccc-ccCC-CCCccCHHHHHHHHHHHcCCcceE
Q 043777          117 -----------ISHTFNMESSGELDGTKLYPH----LK---YTTISDYLD-TSVP-RGNIYSFNDLVSLWEEKIGKALDR  176 (231)
Q Consensus       117 -----------~~~~~~~~~~g~~~~~~~~~~----~~---~~~~~~~~~-~~~~-~~~~lt~~el~~~~~~~~G~~~~~  176 (231)
                                 ....+...+.+......+...    ..   +..-..+.. +... +++.+|++|+++.+++++|+++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~  240 (307)
T 2gas_A          161 RNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEK  240 (307)
T ss_dssp             GGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEE
T ss_pred             ccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCce
Confidence                       000111112222111111110    00   000000111 1222 247899999999999999999999


Q ss_pred             EeecHHHHHHhhhhc-------------eeeeccee-eeecCCCccccccccCCCCcccCHHHHHhhhC
Q 043777          177 VYVAEDQLLKNIQEK-------------ARVLGDQT-NFEIEPSFGVEATELYPDVNYTTVDEYLNQFI  231 (231)
Q Consensus       177 ~~~~~~~~~~~~~~~-------------~~~~g~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~  231 (231)
                      .++|.+++.+.+...             .+..|... .|++++  +.+.+++|||++++|++|||++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~t~~~~l~~~~  307 (307)
T 2gas_A          241 TYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAK--DIEASEAYPDVTYTTADEYLNQFV  307 (307)
T ss_dssp             EEECHHHHHHHHHHBCTTHHHHHHHHHHHHTSCTTCCCCCTTT--EEEHHHHCTTCCCCCHHHHHGGGC
T ss_pred             eecCHHHHHHHHhcCCCchhHHHHHHHHHeecCcccCCCCcCC--CcchHhhCCCCccccHHHHHHHhC
Confidence            999999988765432             12223322 344432  346789999999999999999985

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.90  E-value=5.9e-23  Score=173.75  Aligned_cols=222  Identities=27%  Similarity=0.446  Sum_probs=128.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc--
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS--   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps--   81 (231)
                      ++|+||||||++|++++++|+++|++|++++|+.+..  .+.+..+. .+++++.+|++|++++.++++++|++|+..  
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~--~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK--TTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF   89 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC--HHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch--hhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence            4899999999999999999999999999999986421  22222333 789999999999999999999999876632  


Q ss_pred             -------------------------cCCCcce-eec-hh-HHHH----HHHhhcCccccCceEEEee-e-----------
Q 043777           82 -------------------------EYGAGVF-VKD-TD-VAAF----TINALDDPRTLNKLLHLRE-I-----------  117 (231)
Q Consensus        82 -------------------------~~g~~~~-~~~-~d-i~~~----~~~~~~~~~~~~~~~~~~~-~-----------  117 (231)
                                               .+|...- ... .. ...|    .+.......... ...++. .           
T Consensus        90 ~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~-~~~lr~~~~~~~~~~~~~~  168 (318)
T 2r6j_A           90 PQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIP-YTYVSANCFASYFINYLLR  168 (318)
T ss_dssp             GGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCC-BEEEECCEEHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCC-eEEEEcceehhhhhhhhcc
Confidence                                     2221000 000 00 1111    111000000011 111110 0           


Q ss_pred             ----eeeeeecCCCCcccccccCC----c--c-ccccccccc-ccCC-CCCccCHHHHHHHHHHHcCCcceEEeecHHHH
Q 043777          118 ----SHTFNMESSGELDGTKLYPH----L--K-YTTISDYLD-TSVP-RGNIYSFNDLVSLWEEKIGKALDRVYVAEDQL  184 (231)
Q Consensus       118 ----~~~~~~~~~g~~~~~~~~~~----~--~-~~~~~~~~~-~~~~-~~~~lt~~el~~~~~~~~G~~~~~~~~~~~~~  184 (231)
                          ...+...+.+......+...    .  . +..-..+.. +... +++.+|++|+++.+++++|+++.+.++|.+++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~  248 (318)
T 2r6j_A          169 PYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEI  248 (318)
T ss_dssp             TTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred             ccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecCHHHH
Confidence                00011112222111111100    0  0 000001111 1222 25789999999999999999999999999998


Q ss_pred             HHhhhhc-------------eeeecceeeeecCCCccccccccCCCCcccCHHHHHhhh
Q 043777          185 LKNIQEK-------------ARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQF  230 (231)
Q Consensus       185 ~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~  230 (231)
                      .+.+...             .+..|....|.+.+. +.++++++|+++++|++|||++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~l~~~  306 (318)
T 2r6j_A          249 VALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDELLDIF  306 (318)
T ss_dssp             HHHHHHSCTTTHHHHHHHHHHHTSCTTTSSCCCTT-CEEGGGTCTTCCCCCHHHHHHHH
T ss_pred             HHHHhcCCCcchhhhheeeeEEecCCCCCCCcccc-cchHHHhCCCCccccHHHHHHHH
Confidence            7765432             111222222444332 34678999999999999999875

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.90  E-value=3.5e-23  Score=174.43  Aligned_cols=80  Identities=35%  Similarity=0.538  Sum_probs=65.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc-h-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN-F-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~-~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      |+++|+|+||||||++|++++++|+++|++|++++|+.+.. + +.+.+..+. .++.++.+|++|++++.++++++|++
T Consensus         1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~v   80 (313)
T 1qyd_A            1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVV   80 (313)
T ss_dssp             -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEE
Confidence            76678999999999999999999999999999999986431 2 222222333 68999999999999999999999997


Q ss_pred             EEc
Q 043777           78 FIP   80 (231)
Q Consensus        78 f~p   80 (231)
                      |+.
T Consensus        81 i~~   83 (313)
T 1qyd_A           81 ISA   83 (313)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.88  E-value=8.5e-22  Score=166.73  Aligned_cols=226  Identities=25%  Similarity=0.401  Sum_probs=129.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC-CC-ch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS-AS-NF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~-~~-~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      ++|+|+||||||++|++++++|+++|++|++++|+. +. .+ +.+.+..+. .++.++.+|++|.+++.++++++|++|
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            357899999999999999999999999999999986 32 11 222222333 789999999999999999999999977


Q ss_pred             EcccC----------------C-Ccceee-------c-----hh-HHHH----HHHhhcCccccCceEEEeee-------
Q 043777           79 IPSEY----------------G-AGVFVK-------D-----TD-VAAF----TINALDDPRTLNKLLHLREI-------  117 (231)
Q Consensus        79 ~ps~~----------------g-~~~~~~-------~-----~d-i~~~----~~~~~~~~~~~~~~~~~~~~-------  117 (231)
                      +....                | ...++.       .     .. ...|    .+..+....... ...++..       
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~-~~~lrp~~~~~~~~  161 (321)
T 3c1o_A           83 SALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALP-YTYVSANCFGAYFV  161 (321)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCC-BEEEECCEEHHHHH
T ss_pred             ECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCC-eEEEEeceeccccc
Confidence            63321                1 101110       0     00 1111    111000000011 1111100       


Q ss_pred             ------------eeeeeecCCCCcccccccCC----cc---ccccccccc-ccCCC-CCccCHHHHHHHHHHHcCCcceE
Q 043777          118 ------------SHTFNMESSGELDGTKLYPH----LK---YTTISDYLD-TSVPR-GNIYSFNDLVSLWEEKIGKALDR  176 (231)
Q Consensus       118 ------------~~~~~~~~~g~~~~~~~~~~----~~---~~~~~~~~~-~~~~~-~~~lt~~el~~~~~~~~G~~~~~  176 (231)
                                  ...+...+.+......+...    ..   +..-..+.. +...+ ++.+|++|+++.+++.+|+++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~  241 (321)
T 3c1o_A          162 NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKK  241 (321)
T ss_dssp             HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCE
T ss_pred             cccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCccee
Confidence                        00011111222111111110    00   000001111 22222 57899999999999999999999


Q ss_pred             EeecHHHHHHhhhhc-------------eeeecceeeeecCCCccccccccCCCCcccCHHHHHhhh
Q 043777          177 VYVAEDQLLKNIQEK-------------ARVLGDQTNFEIEPSFGVEATELYPDVNYTTVDEYLNQF  230 (231)
Q Consensus       177 ~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~  230 (231)
                      .++|.+++.+.+...             .+..+....|...+. +.+++++||+++++|++|||++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~t~~~~l~~~  307 (321)
T 3c1o_A          242 VHMPDEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEMRKD-DIEASNLYPELEFTSIDGLLDLF  307 (321)
T ss_dssp             EEECHHHHHHHHHHSCTTTHHHHHHHHHHHTTCTTTSSCCCSS-CEEGGGTCTTCCCCCHHHHHHHH
T ss_pred             eeCCHHHHHHHHhcCCCchhhhHhhhheeeeccccCCCCCCcc-cchHhhhCCCCccccHHHHHHHH
Confidence            999999988765431             111122122333321 34568999999999999999875

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.81  E-value=5.7e-19  Score=147.15  Aligned_cols=72  Identities=21%  Similarity=0.177  Sum_probs=61.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      |+|+||||||+||++++++|++. |++|++++|+...   .   ..+. .++.++.+|++|++++.++++++|++|+.+.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~---~---~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~   74 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEK---V---PDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS   74 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGG---S---CGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHH---H---HHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            57999999999999999999998 9999999998632   1   1222 7899999999999999999999999887543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.74  E-value=7.3e-18  Score=141.17  Aligned_cols=77  Identities=22%  Similarity=0.248  Sum_probs=63.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      |+++|+|+||||||+||++++++|+++| ++|++++|+.... ..   ..+. .++.++.+|++|++++.++++++|++|
T Consensus         2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~-~~---~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi   77 (299)
T 2wm3_A            2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK-AA---KELRLQGAEVVQGDQDDQVIMELALNGAYATF   77 (299)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSH-HH---HHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCH-HH---HHHHHCCCEEEEecCCCHHHHHHHHhcCCEEE
Confidence            6656899999999999999999999998 9999999986421 11   1222 688999999999999999999999988


Q ss_pred             Ecc
Q 043777           79 IPS   81 (231)
Q Consensus        79 ~ps   81 (231)
                      +.+
T Consensus        78 ~~a   80 (299)
T 2wm3_A           78 IVT   80 (299)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            743

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.65  E-value=2.5e-15  Score=124.65  Aligned_cols=72  Identities=22%  Similarity=0.248  Sum_probs=61.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      |+|+||||||+||++++++|+++  |++|++++|+...   .+   .+. .++.++.+|++|.+++.++++++|++++.+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~---~~---~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   74 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK---AS---TLADQGVEVRHGDYNQPESLQKAFAGVSKLLFIS   74 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT---TH---HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH---Hh---HHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcC
Confidence            57999999999999999999999  9999999997532   11   122 678899999999999999999999998854


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        75 ~   75 (287)
T 2jl1_A           75 G   75 (287)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.65  E-value=3.6e-15  Score=123.57  Aligned_cols=71  Identities=20%  Similarity=0.273  Sum_probs=59.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      +|+||||||+||++++++|+++  |++|++++|+...   .+   .+. .++.++.+|++|.+++.++++++|++++.+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~---~~---~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK---AQ---ALAAQGITVRQADYGDEAALTSALQGVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT---CH---HHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh---hh---hhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            5899999999999999999998  9999999997642   11   122 5788999999999999999999999887543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.61  E-value=3.1e-14  Score=119.68  Aligned_cols=69  Identities=14%  Similarity=0.127  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|+|||||||||++++++|+++|++|++++|+...   ..    + .++.++.+|++ .+++.++++++|++++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~----~-~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a   70 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN---KA----I-NDYEYRVSDYT-LEDLINQLNDVDAVVHLA   70 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------CCEEEECCCC-HHHHHHHTTTCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc---cc----C-CceEEEEcccc-HHHHHHhhcCCCEEEEcc
Confidence            3799999999999999999999999999999998321   11    1 37889999999 999999999999988743

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.60  E-value=2.1e-14  Score=122.51  Aligned_cols=79  Identities=18%  Similarity=0.187  Sum_probs=63.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      +|+|||||||||||++++++|+++|++|++++|...... ....+...    . .++.++.+|++|.+++.++++++|++
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V  104 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHV  104 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCEE
Confidence            689999999999999999999999999999999765321 11111111    0 57899999999999999999999998


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      ++.+.
T Consensus       105 ih~A~  109 (351)
T 3ruf_A          105 LHQAA  109 (351)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            87543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.59  E-value=3.5e-14  Score=120.58  Aligned_cols=81  Identities=17%  Similarity=0.108  Sum_probs=64.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh-cCCcEEEEEcCCCHHHHHHHHc--cCCE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF-HSGVFDYWGLLEDEKSLLEAVK--QVDV   76 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~--~~d~   76 (231)
                      |+++|+|+|||||||||++++++|+++|++|++++|+..... ..+.+... ..++.++.+|++|.+++.++++  ++|+
T Consensus         2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (341)
T 3enk_A            2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITA   81 (341)
T ss_dssp             CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred             CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcE
Confidence            666789999999999999999999999999999999764321 11111122 2578899999999999999998  7898


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      +++..
T Consensus        82 vih~A   86 (341)
T 3enk_A           82 AIHFA   86 (341)
T ss_dssp             EEECC
T ss_pred             EEECc
Confidence            77744

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.55  E-value=6.3e-14  Score=119.37  Aligned_cols=67  Identities=22%  Similarity=0.261  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|||||||||||++++++|+++|++|++++|+...           .++.++.+|++|.+++.++++++|++++..
T Consensus        19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   85 (347)
T 4id9_A           19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG   85 (347)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence            5789999999999999999999999999999997531           467789999999999999999999988743

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.55  E-value=7.1e-14  Score=118.99  Aligned_cols=77  Identities=18%  Similarity=0.185  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~   77 (231)
                      +|+|||||||||||++|+++|+++|  +.|++++|...... ...+..+.  .++.++.+|++|.+++.+++++  +|++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V  102 (346)
T 4egb_A           24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI  102 (346)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred             CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence            5799999999999999999999999  55666666542211 11122222  5789999999999999999998  9998


Q ss_pred             EEcc
Q 043777           78 FIPS   81 (231)
Q Consensus        78 f~ps   81 (231)
                      ++.+
T Consensus       103 ih~A  106 (346)
T 4egb_A          103 VNFA  106 (346)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            8743

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.50  E-value=1.7e-13  Score=114.91  Aligned_cols=70  Identities=21%  Similarity=0.186  Sum_probs=57.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      |+|+|||||||||++++++|+++|++|++++|......     .....++.++.+|++|.+ +.+++++ |++++.+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A   70 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR-----EFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFA   70 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCG-----GGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCch-----hhcCCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence            68999999999999999999999999999999764311     111367889999999988 8888877 8877643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.50  E-value=1.9e-13  Score=109.60  Aligned_cols=75  Identities=16%  Similarity=0.213  Sum_probs=62.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+++|+|+||||||+||++++++|+++|++|++++|+...      ...+..++.++.+|++|.+++.++++++|++++.
T Consensus         1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK------IKIENEHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG------CCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc------chhccCceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            7777899999999999999999999999999999997532      1122267889999999999999999999998774


Q ss_pred             c
Q 043777           81 S   81 (231)
Q Consensus        81 s   81 (231)
                      .
T Consensus        75 a   75 (227)
T 3dhn_A           75 F   75 (227)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.47  E-value=1.7e-12  Score=111.34  Aligned_cols=78  Identities=12%  Similarity=0.069  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh--CCCCEEEEEcCCCCch-------hhhhhhhhc-CCcEEEEEcCCCHHHHHHH-Hc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE--YGHPKFALIRDSASNF-------NFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VK   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~--~g~~v~~~~R~~~~~~-------~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~   72 (231)
                      +|+|+|||||||||++++++|++  .|++|++++|......       ......... .++.++.+|++|.+++.++ ..
T Consensus        10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   89 (362)
T 3sxp_A           10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL   89 (362)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence            57999999999999999999999  9999999999654100       000011222 5678999999999999999 78


Q ss_pred             cCCEEEEcc
Q 043777           73 QVDVRFIPS   81 (231)
Q Consensus        73 ~~d~~f~ps   81 (231)
                      ++|++++.+
T Consensus        90 ~~D~vih~A   98 (362)
T 3sxp_A           90 HFDYLFHQA   98 (362)
T ss_dssp             CCSEEEECC
T ss_pred             CCCEEEECC
Confidence            899988743

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.45  E-value=1.5e-12  Score=111.66  Aligned_cols=78  Identities=24%  Similarity=0.267  Sum_probs=62.0

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEc-CCCHHHHHHHHccCCEEE
Q 043777            1 MAG-KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGL-LEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         1 M~~-~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D-~~d~~~l~~al~~~d~~f   78 (231)
                      |++ +|+|+||||||+||++++++|+++|++|++++|+.+.. ..+.+.. ..++.++.+| ++|++++.++++++|++|
T Consensus         1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-~~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi   78 (352)
T 1xgk_A            1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL-IAEELQA-IPNVTLFQGPLLNNVPLMDTLFEGAHLAF   78 (352)
T ss_dssp             --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH-HHHHHHT-STTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh-hHHHHhh-cCCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence            554 68999999999999999999999999999999986421 1111111 1478899999 999999999999999988


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      +.
T Consensus        79 ~~   80 (352)
T 1xgk_A           79 IN   80 (352)
T ss_dssp             EC
T ss_pred             Ec
Confidence            64

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.43  E-value=5.8e-13  Score=114.50  Aligned_cols=72  Identities=21%  Similarity=0.265  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCC-CHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLE-DEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~-d~~~l~~al~~~d~~f~p   80 (231)
                      +|+|+|||||||||++|+++|+++ |++|++++|+....  .   .... .+++++.+|++ |.+.+.++++++|++++.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~--~---~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~   98 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL--G---DLVKHERMHFFEGDITINKEWVEYHVKKCDVILPL   98 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT--G---GGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh--h---hhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEc
Confidence            579999999999999999999998 99999999976421  1   1112 68999999999 999999999999998873

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.43  E-value=5.5e-13  Score=110.69  Aligned_cols=68  Identities=24%  Similarity=0.365  Sum_probs=58.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-CCEEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-VDVRFI   79 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-~d~~f~   79 (231)
                      |+ +|+|+||| +||||++++++|+++|++|++++|+...         +..++.++.+|++|.+++.+++++ +|++++
T Consensus         1 M~-~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih   69 (286)
T 3gpi_A            1 MS-LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP---------MPAGVQTLIADVTRPDTLASIVHLRPEILVY   69 (286)
T ss_dssp             -C-CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC---------CCTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred             CC-CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc---------cccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence            66 57999999 5999999999999999999999997531         226788999999999999999998 999776

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.43  E-value=1.7e-12  Score=108.93  Aligned_cols=70  Identities=17%  Similarity=0.119  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      |+|||||||||||++++++|+++| .++++.|.....  .   .....++.++.+|++| +++.++++++|++++..
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~--~---~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a   71 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGN--E---EFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIA   71 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCC--G---GGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCC--h---hhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECC
Confidence            589999999999999999999999 566666543221  1   1223678899999999 99999999999988743

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.43  E-value=1e-12  Score=108.97  Aligned_cols=34  Identities=15%  Similarity=0.253  Sum_probs=31.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+||||||+||++++++|+++|++|++++|..
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL   39 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc
Confidence            5899999999999999999999999999999853

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.41  E-value=2.3e-12  Score=107.65  Aligned_cols=36  Identities=31%  Similarity=0.313  Sum_probs=33.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS   40 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~   40 (231)
                      |||||||||||||++++++|+++||+|++++|++..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~   36 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP   36 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence            789999999999999999999999999999997643

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.41  E-value=5.2e-12  Score=106.61  Aligned_cols=72  Identities=18%  Similarity=0.265  Sum_probs=59.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps   81 (231)
                      |+|+|||||||||++++++|+++|++|++++|.....  .   +.+..++.++.+|++|.+++.++++  ++|++++.+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH--E---DAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--G---GGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCc--h---hhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            6899999999999999999999999999999875321  1   1222478899999999999999998  789877743

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.40  E-value=4.1e-12  Score=107.47  Aligned_cols=78  Identities=21%  Similarity=0.152  Sum_probs=60.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHcc--CCEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVKQ--VDVRF   78 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~~--~d~~f   78 (231)
                      ++|+|||||||||||++++++|+++|++|++++|+..... ...+..+  ..++.++.+|++|.+++.+++++  +|+++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-RWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC-CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc-ccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            4689999999999999999999999999999999764311 1111222  15688899999999999999986  59888


Q ss_pred             Ecc
Q 043777           79 IPS   81 (231)
Q Consensus        79 ~ps   81 (231)
                      +.+
T Consensus        92 h~A   94 (335)
T 1rpn_A           92 NLA   94 (335)
T ss_dssp             ECC
T ss_pred             ECc
Confidence            743

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.37  E-value=3.2e-12  Score=106.14  Aligned_cols=35  Identities=14%  Similarity=0.209  Sum_probs=32.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|||||||||++++++|+++|++|++++|+.
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   46 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD   46 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc
Confidence            57899999999999999999999999999999863

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.36  E-value=2.6e-11  Score=103.47  Aligned_cols=78  Identities=15%  Similarity=0.089  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-h-hhhhhhh----cCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-N-FSLLRVF----HSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~-~~~~~~~----~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      +|+|+|||||||||++++++|+++|++|++++|+..... . ......+    ..++.++.+|++|.+++.++++++|++
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v  106 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV  106 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEE
Confidence            579999999999999999999999999999999754211 1 1111111    157889999999999999999999998


Q ss_pred             EEcc
Q 043777           78 FIPS   81 (231)
Q Consensus        78 f~ps   81 (231)
                      ++.+
T Consensus       107 ih~A  110 (352)
T 1sb8_A          107 LHQA  110 (352)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            8744

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.35  E-value=2.1e-11  Score=103.08  Aligned_cols=80  Identities=21%  Similarity=0.164  Sum_probs=61.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |+ +|+|+|||||||||++++++|+++|  ++|++++|...... .+.+..+.  .++.++.+|++|.+++.+++.++|+
T Consensus         1 M~-~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   78 (336)
T 2hun_A            1 MH-SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSN-PANLKDLEDDPRYTFVKGDVADYELVKELVRKVDG   78 (336)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSE
T ss_pred             CC-CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCc-hhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCE
Confidence            65 5789999999999999999999986  89999998642111 11122221  5788999999999999999999999


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++.+.
T Consensus        79 vih~A~   84 (336)
T 2hun_A           79 VVHLAA   84 (336)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            887543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.35  E-value=1.5e-11  Score=99.55  Aligned_cols=72  Identities=24%  Similarity=0.242  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|+||||+|+||++++++|+++  |++|++++|+..   +   .+.+..++.++.+|++|.+++.++++++|++++..
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~---~---~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   77 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ---G---KEKIGGEADVFIGDITDADSINPAFQGIDALVILT   77 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHH---H---HHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCC---c---hhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEec
Confidence            689999999999999999999999  899999999742   1   12223567889999999999999999999988743

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.33  E-value=2.9e-11  Score=104.39  Aligned_cols=73  Identities=21%  Similarity=0.046  Sum_probs=61.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|+|||||||||++++++|+++|++|++++|+.....     .....++.++.+|++|.+++.++++++|++++..
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A  101 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-----TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA  101 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-----CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch-----hhccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence            579999999999999999999999999999999764211     0111578899999999999999999999988743

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.33  E-value=2.2e-11  Score=103.13  Aligned_cols=79  Identities=16%  Similarity=0.129  Sum_probs=61.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDV   76 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~   76 (231)
                      |+ +|+|+|||||||||++++++|+++|++|++++|+..... ...+..+.  .++.++.+|++|.+++.+++++  +|+
T Consensus         1 m~-~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   78 (345)
T 2z1m_A            1 MS-GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFA-SWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDE   78 (345)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTT-THHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred             CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc-cccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence            54 689999999999999999999999999999999764311 11122221  4688899999999999999986  598


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      +++..
T Consensus        79 vih~A   83 (345)
T 2z1m_A           79 VYNLA   83 (345)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            88744

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.32  E-value=2.3e-11  Score=100.63  Aligned_cols=66  Identities=17%  Similarity=0.180  Sum_probs=53.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|+|||| ||||++++++|+++|++|++++|+...   .   ..+. .+++++.+|++|.+     ++++|++++..
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~---~---~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a   71 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQ---M---EAIRASGAEPLLWPGEEPS-----LDGVTHLLIST   71 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGG---H---HHHHHTTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhh---h---hhHhhCCCeEEEecccccc-----cCCCCEEEECC
Confidence            479999998 999999999999999999999997532   1   1222 67889999998844     67788877643

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.31  E-value=9.7e-12  Score=99.21  Aligned_cols=73  Identities=14%  Similarity=0.183  Sum_probs=62.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCC-HHHHHHHHccCCEEEEcccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLED-EKSLLEAVKQVDVRFIPSEY   83 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~l~~al~~~d~~f~ps~~   83 (231)
                      |+|+||||||+||++++++|+++|++|++++|+...   .   ... .++.++.+|++| .+++.++++++|++++....
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~---~~~-~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~   73 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQ---V---PQY-NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS   73 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGG---S---CCC-TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccc---h---hhc-CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence            589999999999999999999999999999998531   1   111 678999999999 99999999999999986554


Q ss_pred             C
Q 043777           84 G   84 (231)
Q Consensus        84 g   84 (231)
                      .
T Consensus        74 ~   74 (219)
T 3dqp_A           74 G   74 (219)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.30  E-value=1.2e-11  Score=99.75  Aligned_cols=70  Identities=21%  Similarity=0.270  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCc-EEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGV-FDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v-~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|+||||||+||++++++|+++|++|++++|+...   .   ..+. .++ .++.+|++  +++.+++.++|++++..
T Consensus        21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~---~---~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~a   92 (236)
T 3e8x_A           21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQ---G---PELRERGASDIVVANLE--EDFSHAFASIDAVVFAA   92 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGG---H---HHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECC
T ss_pred             CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHH---H---HHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECC
Confidence            6899999999999999999999999999999998532   1   1222 578 99999998  78888999999987743

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.30  E-value=7e-11  Score=100.00  Aligned_cols=76  Identities=21%  Similarity=0.171  Sum_probs=60.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC---C---CCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY---G---HPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~---g---~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |+|+|||||||||++++++|+++   |   ++|++++|...... .+.+..+.  .++.++.+|++|.+++.+++.++|+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   79 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN-RANLAPVDADPRLRFVHGDIRDAGLLARELRGVDA   79 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC-GGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc-hhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence            58999999999999999999997   7   89999999652111 11122222  5788999999999999999999999


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      +++.+
T Consensus        80 Vih~A   84 (337)
T 1r6d_A           80 IVHFA   84 (337)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            88754

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.29  E-value=2e-12  Score=107.74  Aligned_cols=58  Identities=26%  Similarity=0.388  Sum_probs=45.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~   79 (231)
                      |+|+|||||||||++++++|+ +|++|++++|+..                .+.+|++|.+++.+++++  +|++++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~~~d~vih   60 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKLRPDVIVN   60 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999 8999999998741                124566666666666665  666555

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.29  E-value=1.4e-11  Score=104.63  Aligned_cols=82  Identities=17%  Similarity=0.085  Sum_probs=64.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      |+++|+|+|||||||||++++++|+++  |++|++++|...... .+.+..+. .++.++.+|++|.+++.++++++|++
T Consensus         1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (348)
T 1oc2_A            1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN-KANLEAILGDRVELVVGDIADAELVDKLAAKADAI   79 (348)
T ss_dssp             --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-GGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC-hhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEE
Confidence            776689999999999999999999998  899999999653211 11122333 57889999999999999999999999


Q ss_pred             EEcccC
Q 043777           78 FIPSEY   83 (231)
Q Consensus        78 f~ps~~   83 (231)
                      ++.+..
T Consensus        80 ih~A~~   85 (348)
T 1oc2_A           80 VHYAAE   85 (348)
T ss_dssp             EECCSC
T ss_pred             EECCcc
Confidence            986543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.28  E-value=1e-11  Score=104.09  Aligned_cols=36  Identities=28%  Similarity=0.367  Sum_probs=34.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +|+|+|||||||||++++++|+++|++|++++|+..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            689999999999999999999999999999999765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.27  E-value=1.9e-11  Score=96.00  Aligned_cols=75  Identities=20%  Similarity=0.215  Sum_probs=63.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-cCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-HSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |+ +|+|+||||||+||++++++|+++|++|++++|+...      .... ..++.++.+|++|++++.++++++|++++
T Consensus         1 M~-~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~   73 (206)
T 1hdo_A            1 MA-VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR------LPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (206)
T ss_dssp             CC-CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG------SCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CC-CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh------cccccCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            66 4899999999999999999999999999999997532      1112 26788999999999999999999999988


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      ...
T Consensus        74 ~a~   76 (206)
T 1hdo_A           74 LLG   76 (206)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.24  E-value=1.5e-10  Score=99.47  Aligned_cols=76  Identities=17%  Similarity=0.191  Sum_probs=59.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-------c-CCcEEEEEcCCCHHHHHHHHcc--C
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-------H-SGVFDYWGLLEDEKSLLEAVKQ--V   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-------~-~~v~~~~~D~~d~~~l~~al~~--~   74 (231)
                      |+|+|||||||||++++++|+++|++|++++|+..... ...+..+       . .++.++.+|++|.+++.+++++  +
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFN-TGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC-CTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccc-hhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            68999999999999999999999999999999754210 0011111       1 4678899999999999999986  5


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |++++..
T Consensus       104 d~vih~A  110 (375)
T 1t2a_A          104 TEIYNLG  110 (375)
T ss_dssp             SEEEECC
T ss_pred             CEEEECC
Confidence            9888743

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.23  E-value=2e-11  Score=98.72  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|+||||||+||++++++|+++| ++|++++|+...      +..+. .++.++.+|++|.+++.++++++|++++..
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~------~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a   96 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK------IHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL   96 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGG------SCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhh------hcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence            5689999999999999999999999 899999997532      11222 678899999999999999999999998753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.23  E-value=1.9e-11  Score=103.61  Aligned_cols=78  Identities=19%  Similarity=0.221  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|||||||||||++++++|+++|++|+++.|+.....+...+..+.  .++.++.+|++|.+++.++++++|++|+..
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            478999999999999999999999999999999754211111111221  568889999999999999999999999854

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.22  E-value=6.7e-11  Score=94.29  Aligned_cols=71  Identities=20%  Similarity=0.162  Sum_probs=59.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEY   83 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~   83 (231)
                      |+|+||||||+||++++++|+++|++|++++|+...      ...+. .++.++.+|++|.++  +++.++|++++....
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~------~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~   72 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQK------AADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSV   72 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH------HHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccc------cccccCCCceEEecccccccH--hhcccCCEEEECCcc
Confidence            579999999999999999999999999999997421      12222 689999999999988  889999999986544

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.22  E-value=4.5e-11  Score=101.24  Aligned_cols=73  Identities=21%  Similarity=0.197  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      +|+|+|||||||||++++++|+++|++|++++|+...   .   ..+. .++.++.+|++|.+++.++++++|++++...
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~---~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQ---I---QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSC---G---GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHh---h---hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            4689999999999999999999999999999997642   1   1222 4788999999999999999999999888543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.21  E-value=8.4e-11  Score=93.36  Aligned_cols=71  Identities=18%  Similarity=0.197  Sum_probs=59.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEY   83 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~   83 (231)
                      |+|+||||||+||++++++|+++|++|++++|+...   .   ..+..++.++.+|++|.++  +++.++|++++....
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~---~---~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~   71 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK---I---TQTHKDINILQKDIFDLTL--SDLSDQNVVVDAYGI   71 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHH---H---HHHCSSSEEEECCGGGCCH--HHHTTCSEEEECCCS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchh---h---hhccCCCeEEeccccChhh--hhhcCCCEEEECCcC
Confidence            589999999999999999999999999999998531   1   1222678999999999988  889999999986544

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.19  E-value=8e-11  Score=93.96  Aligned_cols=75  Identities=19%  Similarity=0.168  Sum_probs=61.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHH-hCCCCEEEEEcCCC-CchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSI-EYGHPKFALIRDSA-SNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~-~~g~~v~~~~R~~~-~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      ++|+||||||+||++++++|+ ++|++|++++|+.. .   .+.+.....++.++.+|++|.+++.++++++|++++...
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag   82 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTR---IPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM   82 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHH---SCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcccc---chhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence            459999999999999999999 89999999999742 1   111111227789999999999999999999999988654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.18  E-value=1.1e-10  Score=97.85  Aligned_cols=64  Identities=17%  Similarity=0.054  Sum_probs=41.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~p   80 (231)
                      +|+|+||||||+||++++++|+++|++|++++|+...           .+  ++.+|++|.+++.+++++  +|++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~   67 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHC   67 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------CHHHHHHHCCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------CC--eEEecCCCHHHHHHHHHhhCCCEEEEC
Confidence            3799999999999999999999999999999986420           12  667888888888888875  7887763

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.18  E-value=7e-11  Score=98.49  Aligned_cols=61  Identities=13%  Similarity=-0.008  Sum_probs=46.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~p   80 (231)
                      +|+|||||||||||++++++|+++|+      +...         . ..++..+.+|++|.+++.+++++  +|++++.
T Consensus         6 ~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~---------~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~   68 (319)
T 4b8w_A            6 SMRILVTGGSGLVGKAIQKVVADGAG------LPGE---------D-WVFVSSKDADLTDTAQTRALFEKVQPTHVIHL   68 (319)
T ss_dssp             CCEEEEETCSSHHHHHHHHHHHTTTC------CTTC---------E-EEECCTTTCCTTSHHHHHHHHHHSCCSEEEEC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhcCC------cccc---------c-ccccCceecccCCHHHHHHHHhhcCCCEEEEC
Confidence            68999999999999999999999998      2110         0 02233446788888888888887  7887764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.18  E-value=5.1e-11  Score=98.06  Aligned_cols=74  Identities=18%  Similarity=0.027  Sum_probs=63.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+ +|+|+||||+|+||++++++|+++|++|++++|+....        ...++.++.+|++|.+++.++++++|++++.
T Consensus         1 m~-~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~   71 (267)
T 3rft_A            1 MA-MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP--------AGPNEECVQCDLADANAVNAMVAGCDGIVHL   71 (267)
T ss_dssp             CC-EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC--------CCTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CC-CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc--------cCCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence            55 57899999999999999999999999999999986321        0257889999999999999999999999986


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        72 Ag~   74 (267)
T 3rft_A           72 GGI   74 (267)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.16  E-value=7.8e-10  Score=93.86  Aligned_cols=69  Identities=14%  Similarity=0.118  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-c-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-H-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|+|+|||||||||++++++|+++|++|++++|......  ..+..+ . .++.++.+|+.+..     +.++|++++
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vih   97 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK--RNVEHWIGHENFELINHDVVEPL-----YIEVDQIYH   97 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEEE
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccch--hhhhhhccCCceEEEeCccCChh-----hcCCCEEEE
Confidence            679999999999999999999999999999999753211  111111 1 45777788876642     344555444

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.16  E-value=4.5e-11  Score=101.23  Aligned_cols=78  Identities=28%  Similarity=0.234  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++||||||+||||++++++|+++|++|+++.|+.....+...+..+.   .++.++.+|++|.+++.++++++|++|+.
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   84 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHV   84 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEEC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEe
Confidence            578999999999999999999999999999999754210111111111   24778999999999999999999999985


Q ss_pred             c
Q 043777           81 S   81 (231)
Q Consensus        81 s   81 (231)
                      .
T Consensus        85 A   85 (337)
T 2c29_D           85 A   85 (337)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.15  E-value=1.2e-10  Score=99.49  Aligned_cols=80  Identities=19%  Similarity=0.291  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhC-CC-CEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEY-GH-PKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~-g~-~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ++|+|+||||||+||++++++|+++ |+ +|++++|+...  .......+. .++.++.+|++|.+++.++++++|++|+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELK--QSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHH--HHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhh--HHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            4689999999999999999999999 97 99999997421  111122333 5788999999999999999999999998


Q ss_pred             cccCC
Q 043777           80 PSEYG   84 (231)
Q Consensus        80 ps~~g   84 (231)
                      .+...
T Consensus        98 ~Aa~~  102 (344)
T 2gn4_A           98 AAALK  102 (344)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            76543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.13  E-value=1.8e-10  Score=97.81  Aligned_cols=79  Identities=18%  Similarity=0.045  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC------ch-hhhhhhhh-cCCcEEEEEcCCCHHHHHHHHc--c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS------NF-NFSLLRVF-HSGVFDYWGLLEDEKSLLEAVK--Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~------~~-~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~--~   73 (231)
                      +|+|+|||||||||++++++|+++|++|++++|....      .. ..+.+... ..++.++.+|++|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            3799999999999999999999999999999986432      11 11111111 2578899999999999999998  7


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        82 ~d~vih~A~   90 (348)
T 1ek6_A           82 FMAVIHFAG   90 (348)
T ss_dssp             EEEEEECCS
T ss_pred             CCEEEECCC
Confidence            899888654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.13  E-value=5e-10  Score=93.99  Aligned_cols=37  Identities=27%  Similarity=0.412  Sum_probs=32.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+ +|+|+|||||||||++++++|+++|++|+++.|+.
T Consensus         1 M~-~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~   37 (321)
T 1e6u_A            1 MA-KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD   37 (321)
T ss_dssp             -C-CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc
Confidence            55 57999999999999999999999999999887753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.13  E-value=2.3e-10  Score=96.98  Aligned_cols=78  Identities=13%  Similarity=0.140  Sum_probs=61.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~f~p   80 (231)
                      |+|||||||||||++++++|+++|++|++++|...... ......+.  .++.++.+|++|.+++.+++++  +|++++.
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA-TDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH-HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc-hhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            58999999999999999999999999999998532111 11112222  4588999999999999999998  9999986


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      +..
T Consensus        81 A~~   83 (347)
T 1orr_A           81 AGQ   83 (347)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            543

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.12  E-value=3.2e-10  Score=99.31  Aligned_cols=77  Identities=19%  Similarity=0.267  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hh---hhh---------hhhcCCcEEEEEcCCCHHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NF---SLL---------RVFHSGVFDYWGLLEDEKSLLEA   70 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~---~~~---------~~~~~~v~~~~~D~~d~~~l~~a   70 (231)
                      +|+|+||||||+||++++++|++.|++|++++|+..... ..   +.+         .....++.++.+|++|.+++. +
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~  147 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L  147 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-C
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-C
Confidence            568999999999999999999999999999999865210 00   011         111268899999999988887 7


Q ss_pred             HccCCEEEEcc
Q 043777           71 VKQVDVRFIPS   81 (231)
Q Consensus        71 l~~~d~~f~ps   81 (231)
                      +.++|++++.+
T Consensus       148 ~~~~d~Vih~A  158 (427)
T 4f6c_A          148 PENMDTIIHAG  158 (427)
T ss_dssp             SSCCSEEEECC
T ss_pred             cCCCCEEEECC
Confidence            77899887743

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.11  E-value=5.7e-11  Score=99.74  Aligned_cols=78  Identities=22%  Similarity=0.247  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc-CCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR-DSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R-~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +++|||||||||||++++++|+++|++|+++.| +.....+...+..+.   .++.++.+|++|.+++.++++++|++++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            368999999999999999999999999999998 532100011111111   2467888999999999999999999998


Q ss_pred             cc
Q 043777           80 PS   81 (231)
Q Consensus        80 ps   81 (231)
                      ..
T Consensus        81 ~A   82 (322)
T 2p4h_X           81 TA   82 (322)
T ss_dssp             CC
T ss_pred             cC
Confidence            65

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.11  E-value=1.8e-10  Score=98.28  Aligned_cols=77  Identities=19%  Similarity=0.226  Sum_probs=62.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVKQ--VDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~~--~d~~f~   79 (231)
                      +|+|+|||||||||++++++|+++|++|++++|+.....  .....+  ..++.++.+|++|.+++.+++++  +|++++
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVP--SLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSS--CHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccc--hhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            589999999999999999999999999999999764311  111111  25788999999999999999987  899998


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      ...
T Consensus        87 ~A~   89 (357)
T 1rkx_A           87 MAA   89 (357)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.10  E-value=3.3e-10  Score=95.79  Aligned_cols=77  Identities=16%  Similarity=0.185  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps   81 (231)
                      +|+|+||||||+||++++++|+++|++|++++|+....  .+....+ .++.++.+|++|.+++.++++  ++|++++..
T Consensus        20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   96 (330)
T 2pzm_A           20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK--REVLPPV-AGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA   96 (330)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC--GGGSCSC-TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc--hhhhhcc-CCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence            58999999999999999999999999999999965321  1111111 578889999999999999999  899999865


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus        97 ~~   98 (330)
T 2pzm_A           97 AA   98 (330)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.10  E-value=2.8e-10  Score=96.40  Aligned_cols=77  Identities=16%  Similarity=0.172  Sum_probs=62.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps   81 (231)
                      +|+|+|||||||||++++++|+++|++|++++|+....  .+.+..+ .++.++.+|++|.+++.+++++  +|++++..
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A   97 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGR--REHLKDH-PNLTFVEGSIADHALVNQLIGDLQPDAVVHTA   97 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCC--GGGSCCC-TTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccc--hhhHhhc-CCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence            57999999999999999999999999999999975321  1111111 4788899999999999999998  99999865


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus        98 ~~   99 (333)
T 2q1w_A           98 AS   99 (333)
T ss_dssp             CC
T ss_pred             ee
Confidence            43

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.09  E-value=1.2e-09  Score=93.25  Aligned_cols=72  Identities=14%  Similarity=0.192  Sum_probs=54.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-----cCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-----QVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-----~~d~~   77 (231)
                      +|+|+|||||||||++++++|+++| ++|+++.|.....    ....+ .++. +.+|++|.+.+.++++     ++|++
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~----~~~~~-~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT----KFVNL-VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGG----GGGGT-TTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcc----hhhcc-cCce-EeeecCcHHHHHHHHhhcccCCCCEE
Confidence            4789999999999999999999999 9999999875321    01112 2333 6789999999999887     48988


Q ss_pred             EEcc
Q 043777           78 FIPS   81 (231)
Q Consensus        78 f~ps   81 (231)
                      ++..
T Consensus       120 ih~A  123 (357)
T 2x6t_A          120 FHEG  123 (357)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            8743

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.07  E-value=3e-10  Score=101.85  Aligned_cols=78  Identities=21%  Similarity=0.280  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhh---h---------hhhcCCcEEEEEcCCCHHHHHH
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSL---L---------RVFHSGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~---~---------~~~~~~v~~~~~D~~d~~~l~~   69 (231)
                      ++|+|+|||||||||++++++|++.|++|++++|+..... ....   +         .....++.++.+|++|++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            3579999999999999999999999999999999875210 0000   0         111268999999999987777 


Q ss_pred             HHccCCEEEEcc
Q 043777           70 AVKQVDVRFIPS   81 (231)
Q Consensus        70 al~~~d~~f~ps   81 (231)
                      +..++|++++..
T Consensus       228 ~~~~~D~Vih~A  239 (508)
T 4f6l_B          228 LPENMDTIIHAG  239 (508)
T ss_dssp             CSSCCSEEEECC
T ss_pred             CccCCCEEEECC
Confidence            677788877643

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.07  E-value=2.2e-10  Score=95.72  Aligned_cols=72  Identities=15%  Similarity=0.095  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~   79 (231)
                      +|+|+|||||||||++++++|+++  |++|++++|+...   ..    +..++.++.+|++|.+++.++++  ++|++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~---~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLN---TD----VVNSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCS---CH----HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcc---cc----ccCCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            378999999999999999999999  8999999997542   11    11356789999999999999998  8999998


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      .+.
T Consensus        75 ~a~   77 (312)
T 2yy7_A           75 MAA   77 (312)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.05  E-value=1.1e-10  Score=98.58  Aligned_cols=80  Identities=16%  Similarity=-0.010  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh-cCCcEEE-EEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF-HSGVFDY-WGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~-~~~v~~~-~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +|+|||||||||||++++++|+++|++|++++|+..... ..+.+... ..++.++ .+|++|.+++.++++++|++++.
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   90 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHI   90 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEEC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEEe
Confidence            579999999999999999999999999999999742100 00111111 1467788 79999999999999999999986


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        91 A~~   93 (342)
T 1y1p_A           91 ASV   93 (342)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.05  E-value=6.6e-10  Score=93.24  Aligned_cols=71  Identities=15%  Similarity=0.118  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps   81 (231)
                      .|+|||||||||||++++++|+++|++|++++|+...   .    .+  ++.++.+|++|.+++.+++++  +|++++..
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---~----~l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   82 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA---K----LP--NVEMISLDIMDSQRVKKVISDIKPDYIFHLA   82 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC---C----CT--TEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc---c----cc--eeeEEECCCCCHHHHHHHHHhcCCCEEEEcC
Confidence            5789999999999999999999999999999997531   0    11  678899999999999999987  89999865


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus        83 ~~   84 (321)
T 2pk3_A           83 AK   84 (321)
T ss_dssp             SC
T ss_pred             cc
Confidence            44

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.04  E-value=7e-10  Score=93.82  Aligned_cols=78  Identities=21%  Similarity=0.193  Sum_probs=60.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh-cCCcEEEEEcCCCHHHHHHHHcc--CCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF-HSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~~--~d~~f~p   80 (231)
                      |+|+|||||||||++++++|+++|++|+++.|...... ..+.+... ..++.++.+|++|.+++.+++++  +|++++.
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            58999999999999999999999999999987542211 11111222 24678899999999999999974  8999986


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      +.
T Consensus        81 A~   82 (338)
T 1udb_A           81 AG   82 (338)
T ss_dssp             CS
T ss_pred             Cc
Confidence            54

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.04  E-value=1.3e-10  Score=93.75  Aligned_cols=74  Identities=19%  Similarity=0.110  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|+|+||||+|+||++++++|+++|+  +|++++|+.....  . .  ...++.++.+|++|.+++.++++++|++++..
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~--~-~--~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a   92 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD--E-E--AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCL   92 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC--S-G--GGGGCEEEECCGGGGGGGGGGGSSCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc--c-c--ccCCceEEecCcCCHHHHHHHhcCCCEEEECC
Confidence            57899999999999999999999999  9999999864211  0 0  01467889999999999999999999998865


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        93 g   93 (242)
T 2bka_A           93 G   93 (242)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.03  E-value=4.2e-10  Score=94.19  Aligned_cols=73  Identities=21%  Similarity=0.154  Sum_probs=59.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps~   82 (231)
                      |+|+|||||||||++++++|+++|++|++++|.....  .   ..+..++.++.+|++|.+++.++++  ++|++++...
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~--~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGK--R---ENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCC--G---GGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCc--h---hhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            5899999999999999999999999999998854211  1   1122467788999999999999998  7999988654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.03  E-value=7.6e-10  Score=93.64  Aligned_cols=73  Identities=25%  Similarity=0.232  Sum_probs=59.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCC-HHHHHHHHccCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLED-EKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d-~~~l~~al~~~d~~f~ps   81 (231)
                      |+|+|||||||||++++++|+++ |++|++++|+...   .+  .... .++.++.+|++| .+.+.++++++|++++..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~---~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A   75 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA---IS--RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG---GG--GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcch---HH--HhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence            58999999999999999999998 8999999997532   11  1112 578899999998 467888999999999865


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        76 ~   76 (345)
T 2bll_A           76 A   76 (345)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.03  E-value=1e-10  Score=95.98  Aligned_cols=71  Identities=17%  Similarity=0.022  Sum_probs=61.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcccC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEY   83 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~   83 (231)
                      |+|+||||||+||++++++|+++|++|++++|+....        ...++.++.+|++|.+++.++++++|++++....
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA--------AEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV   73 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC--------CCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc--------cCCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence            6899999999999999999999999999999975321        1146788899999999999999999999986543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.03  E-value=8.5e-10  Score=89.68  Aligned_cols=83  Identities=18%  Similarity=0.117  Sum_probs=63.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      |.++++++||||+|+||++++++|+++|++|.++.|+.....  ..+.+......+.++.+|++|.+++.++++      
T Consensus         1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            677789999999999999999999999999999888642111  111112222567789999999999988877      


Q ss_pred             -cCCEEEEcccC
Q 043777           73 -QVDVRFIPSEY   83 (231)
Q Consensus        73 -~~d~~f~ps~~   83 (231)
                       .+|++++....
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence             58988875543

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.03  E-value=1.1e-09  Score=93.33  Aligned_cols=78  Identities=14%  Similarity=0.084  Sum_probs=61.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc--cCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK--QVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~--~~d~~f~   79 (231)
                      |+|||||||||||++++++|++. |++|++++|...... .+.+..+.  .++.++.+|++|.+++.++++  ++|++++
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCc-hhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            57999999999999999999998 799999999652111 11112221  478899999999999999998  8999998


Q ss_pred             cccC
Q 043777           80 PSEY   83 (231)
Q Consensus        80 ps~~   83 (231)
                      ....
T Consensus        80 ~A~~   83 (361)
T 1kew_A           80 LAAE   83 (361)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            6554

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.02  E-value=4.9e-10  Score=96.51  Aligned_cols=77  Identities=21%  Similarity=0.243  Sum_probs=62.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      +|+|+|||||||||++++++|+++| ++|++++|+....  .+.+. ...++.++.+|++|.+++.++++++|++++.+.
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~l~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~  108 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAE--KINVP-DHPAVRFSETSITDDALLASLQDEYDYVFHLAT  108 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCC--GGGSC-CCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCc--hhhcc-CCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence            4789999999999999999999999 9999999975321  11111 025788999999999999999999999998654


Q ss_pred             C
Q 043777           83 Y   83 (231)
Q Consensus        83 ~   83 (231)
                      .
T Consensus       109 ~  109 (377)
T 2q1s_A          109 Y  109 (377)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.01  E-value=1.2e-09  Score=90.44  Aligned_cols=80  Identities=16%  Similarity=0.129  Sum_probs=62.4

Q ss_pred             CC-CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            1 MA-GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         1 M~-~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      |+ ++++++||||+|+||++++++|+++|++|++++|+...  ..+....+..++.++.+|++|.+++.++++       
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEA--LDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG--GHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            44 35789999999999999999999999999999997532  122222333678899999999999988887       


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      ++|++++...
T Consensus        79 ~id~lv~~Ag   88 (281)
T 3m1a_A           79 RVDVLVNNAG   88 (281)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            5799887554

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.01  E-value=6.1e-10  Score=100.10  Aligned_cols=36  Identities=25%  Similarity=0.377  Sum_probs=33.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +|+|||||||||||++|+++|+++|++|++++|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~  182 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP  182 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            579999999999999999999999999999999854

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.01  E-value=5.6e-10  Score=95.25  Aligned_cols=72  Identities=14%  Similarity=0.096  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-----CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc---C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-----HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ---V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-----~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~---~   74 (231)
                      +|+|+|||||||||++++++|+++|     ++|++++|+....   .    .. .+++++.+|++|.+++.+++++   +
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~---~----~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   73 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA---W----HEDNPINYVQCDISDPDDSQAKLSPLTDV   73 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCS---C----CCSSCCEEEECCTTSHHHHHHHHTTCTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcc---c----cccCceEEEEeecCCHHHHHHHHhcCCCC
Confidence            3789999999999999999999999     9999999986421   0    12 5788999999999999999998   8


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        74 d~vih~a~   81 (364)
T 2v6g_A           74 THVFYVTW   81 (364)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99888543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.00  E-value=1.3e-09  Score=88.66  Aligned_cols=78  Identities=17%  Similarity=0.071  Sum_probs=61.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC-CCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD-SASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~-~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+ ... . .+....+   ..++.++.+|++|.+++.++++       
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPAN-I-DETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-H-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhh-H-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999998 432 1 1111222   2457789999999999998887       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      ++|++++....
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            78998886553

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.00  E-value=2e-09  Score=89.63  Aligned_cols=70  Identities=16%  Similarity=0.213  Sum_probs=54.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-----CCEEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-----VDVRFI   79 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-----~d~~f~   79 (231)
                      +|+|||||||||++++++|+++| ++|+++.|...... .   ..+ .++. +.+|++|.+.+.+++++     +|++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~---~~~-~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F---VNL-VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-G---HHH-HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-h---hhc-Ccce-eccccccHHHHHHHHhccccCCCcEEEE
Confidence            58999999999999999999999 99999998753210 1   111 1223 67899999999999875     898887


Q ss_pred             cc
Q 043777           80 PS   81 (231)
Q Consensus        80 ps   81 (231)
                      .+
T Consensus        75 ~a   76 (310)
T 1eq2_A           75 EG   76 (310)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.00  E-value=6.2e-10  Score=96.35  Aligned_cols=80  Identities=20%  Similarity=0.120  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchh--------------hhhhh---hh-cCCcEEEEEcCCCHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFN--------------FSLLR---VF-HSGVFDYWGLLEDEK   65 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~--------------~~~~~---~~-~~~v~~~~~D~~d~~   65 (231)
                      +++|||||||||||++++++|+++|++|++++|.......              .+.+.   .. ..++.++.+|++|.+
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~   90 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   90 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence            5799999999999999999999999999999885311000              00111   11 257889999999999


Q ss_pred             HHHHHHcc--CCEEEEcccC
Q 043777           66 SLLEAVKQ--VDVRFIPSEY   83 (231)
Q Consensus        66 ~l~~al~~--~d~~f~ps~~   83 (231)
                      ++.+++++  +|++++.+..
T Consensus        91 ~~~~~~~~~~~D~Vih~A~~  110 (404)
T 1i24_A           91 FLAESFKSFEPDSVVHFGEQ  110 (404)
T ss_dssp             HHHHHHHHHCCSEEEECCSC
T ss_pred             HHHHHHhccCCCEEEECCCC
Confidence            99999998  9999986543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.00  E-value=2e-09  Score=92.95  Aligned_cols=79  Identities=20%  Similarity=0.193  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH-hCCCCEEEEEcCCCCc--------hhhhh---hhhhc-----CC---cEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSI-EYGHPKFALIRDSASN--------FNFSL---LRVFH-----SG---VFDYWGLLED   63 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~-~~g~~v~~~~R~~~~~--------~~~~~---~~~~~-----~~---v~~~~~D~~d   63 (231)
                      +|+|||||||||||++++++|+ ++|++|++++|.....        . ...   +..+.     .+   +.++.+|++|
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETR-ENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCH-HHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchH-HHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence            5799999999999999999999 9999999999875321        1 111   11111     14   8899999999


Q ss_pred             HHHHHHHHc--c-CCEEEEcccC
Q 043777           64 EKSLLEAVK--Q-VDVRFIPSEY   83 (231)
Q Consensus        64 ~~~l~~al~--~-~d~~f~ps~~   83 (231)
                      .+++.++++  + +|++++.+..
T Consensus        81 ~~~~~~~~~~~~~~d~vih~A~~  103 (397)
T 1gy8_A           81 EDFLNGVFTRHGPIDAVVHMCAF  103 (397)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCc
Confidence            999999998  6 9999986543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=98.99  E-value=3.4e-09  Score=94.41  Aligned_cols=80  Identities=16%  Similarity=0.109  Sum_probs=62.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC---CCCEEEEEcCCCCch-hhhhhhh---------------hcCCcEEEEEcCC--
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY---GHPKFALIRDSASNF-NFSLLRV---------------FHSGVFDYWGLLE--   62 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~---g~~v~~~~R~~~~~~-~~~~~~~---------------~~~~v~~~~~D~~--   62 (231)
                      +|+|+||||||+||++++++|++.   |++|++++|+..... ...+.+.               ...++.++.+|++  
T Consensus        73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~  152 (478)
T 4dqv_A           73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEP  152 (478)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCc
Confidence            689999999999999999999999   899999999864211 1111011               1157899999998  


Q ss_pred             ----CHHHHHHHHccCCEEEEcccC
Q 043777           63 ----DEKSLLEAVKQVDVRFIPSEY   83 (231)
Q Consensus        63 ----d~~~l~~al~~~d~~f~ps~~   83 (231)
                          |.+.+.++++++|++|+....
T Consensus       153 ~~gld~~~~~~~~~~~D~Vih~Aa~  177 (478)
T 4dqv_A          153 DLGLDQPMWRRLAETVDLIVDSAAM  177 (478)
T ss_dssp             GGGCCHHHHHHHHHHCCEEEECCSS
T ss_pred             ccCCCHHHHHHHHcCCCEEEECccc
Confidence                677899999999999986543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=98.99  E-value=3.2e-09  Score=86.77  Aligned_cols=78  Identities=14%  Similarity=0.096  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+....  .+..+.+...+.++.+|++|.+++.++++       .+|+
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG--EAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH--HHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhH--HHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            57899999999999999999999999999999986431  12222333568889999999999988887       6899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        90 li~~Ag~   96 (265)
T 2o23_A           90 AVNCAGI   96 (265)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            8876543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=98.98  E-value=1.2e-09  Score=88.78  Aligned_cols=78  Identities=13%  Similarity=0.078  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ..++.++.+|++|++++.++++       +
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADA--ANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999997421  11111222   2467888999999999988887       7


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        89 ~d~vi~~Ag~   98 (255)
T 1fmc_A           89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8998886543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.98  E-value=1.7e-09  Score=88.16  Aligned_cols=78  Identities=18%  Similarity=0.121  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ..++.++.+|++|.+++.++++       +
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAM--ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997421  11111222   2468889999999999988876       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        91 id~vi~~Ag~  100 (260)
T 3awd_A           91 VDILVACAGI  100 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8998886543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=98.97  E-value=1.2e-09  Score=94.07  Aligned_cols=78  Identities=19%  Similarity=0.113  Sum_probs=60.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-------cC-CcEEEEEcCCCHHHHHHHHcc--C
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-------HS-GVFDYWGLLEDEKSLLEAVKQ--V   74 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-------~~-~v~~~~~D~~d~~~l~~al~~--~   74 (231)
                      |+|||||||||||++++++|+++|++|++++|+..... ...+..+       .. ++.++.+|++|.+++.+++++  +
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFN-TQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC-CTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcccc-chhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            58999999999999999999999999999999764210 0001111       12 788899999999999999987  5


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       108 d~Vih~A~~  116 (381)
T 1n7h_A          108 DEVYNLAAQ  116 (381)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCcc
Confidence            999886543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.97  E-value=2.4e-09  Score=86.44  Aligned_cols=78  Identities=22%  Similarity=0.168  Sum_probs=62.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      |. +++++||||+|+||++++++|+++|  ++|++++|+...   .+.+.... .++.++.+|++|.+++.++++     
T Consensus         1 m~-~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~---~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            1 MS-PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK---ATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CC-CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGG---CHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CC-CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHH---HHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            55 6789999999999999999999999  999999997532   11122222 568889999999999988887     


Q ss_pred             ----cCCEEEEccc
Q 043777           73 ----QVDVRFIPSE   82 (231)
Q Consensus        73 ----~~d~~f~ps~   82 (231)
                          ++|++++...
T Consensus        77 ~g~~~id~li~~Ag   90 (250)
T 1yo6_A           77 VGSDGLSLLINNAG   90 (250)
T ss_dssp             HGGGCCCEEEECCC
T ss_pred             cCCCCCcEEEECCc
Confidence                7899887554

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=98.97  E-value=1.3e-09  Score=89.82  Aligned_cols=81  Identities=19%  Similarity=0.114  Sum_probs=62.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      |.++++++||||+|+||++++++|+++|++|++++|+...  ..+....+   ...+.++.+|++|.+++.++++     
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQAR--IEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            7778899999999999999999999999999999997532  11112222   2456778899999999888776     


Q ss_pred             --cCCEEEEcccC
Q 043777           73 --QVDVRFIPSEY   83 (231)
Q Consensus        73 --~~d~~f~ps~~   83 (231)
                        .+|++++....
T Consensus        79 ~g~iD~lVnnAG~   91 (264)
T 3tfo_A           79 WGRIDVLVNNAGV   91 (264)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence              57888875543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.97  E-value=1.2e-09  Score=93.69  Aligned_cols=33  Identities=21%  Similarity=0.345  Sum_probs=30.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~   37 (231)
                      |+|+||||||+||++++++|+++|+ +|++++|+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~   34 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ   34 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence            6899999999999999999999998 99988883

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.96  E-value=1.7e-09  Score=89.72  Aligned_cols=81  Identities=15%  Similarity=0.129  Sum_probs=60.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      |.++++++||||+|+||++++++|+++|+.|++++|+...  ..+..+.+   ...+.++.+|++|.+++.++++     
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN--VSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER   98 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5557899999999999999999999999999999997532  11111222   2567889999999999888776     


Q ss_pred             --cCCEEEEcccC
Q 043777           73 --QVDVRFIPSEY   83 (231)
Q Consensus        73 --~~d~~f~ps~~   83 (231)
                        .+|++++....
T Consensus        99 ~g~id~lv~nAg~  111 (279)
T 3sju_A           99 FGPIGILVNSAGR  111 (279)
T ss_dssp             HCSCCEEEECCCC
T ss_pred             cCCCcEEEECCCC
Confidence              47888875543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=98.96  E-value=1.2e-09  Score=89.52  Aligned_cols=81  Identities=16%  Similarity=0.076  Sum_probs=62.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHh-CCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIE-YGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK----   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~-~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~----   72 (231)
                      |.++++|+||||+|+||++++++|++ .|++|++++|+...  ..+..+.+   ...+.++.+|++|.+++.++++    
T Consensus         1 ~~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR--GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             -CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHH--HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHH--HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            45578999999999999999999999 99999999997421  11111222   2467889999999999988887    


Q ss_pred             ---cCCEEEEcccC
Q 043777           73 ---QVDVRFIPSEY   83 (231)
Q Consensus        73 ---~~d~~f~ps~~   83 (231)
                         ++|++++....
T Consensus        79 ~~g~id~li~~Ag~   92 (276)
T 1wma_A           79 EYGGLDVLVNNAGI   92 (276)
T ss_dssp             HHSSEEEEEECCCC
T ss_pred             hcCCCCEEEECCcc
Confidence               67888875543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=98.96  E-value=8.7e-10  Score=93.41  Aligned_cols=75  Identities=20%  Similarity=0.149  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-------CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-------HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-------~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-~~d   75 (231)
                      +|+|+||||+||||++++++|+++|       ++|++++|+.....     .....++.++.+|++|.+++.++++ ++|
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d   88 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-----AGFSGAVDARAADLSAPGEAEKLVEARPD   88 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCC-----TTCCSEEEEEECCTTSTTHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccc-----cccCCceeEEEcCCCCHHHHHHHHhcCCC
Confidence            5799999999999999999999999       89999999753210     0112567889999999999999995 899


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++.+..
T Consensus        89 ~vih~A~~   96 (342)
T 2hrz_A           89 VIFHLAAI   96 (342)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99986543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=98.96  E-value=2e-09  Score=86.94  Aligned_cols=80  Identities=16%  Similarity=0.102  Sum_probs=60.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      |+ +++++||||+|+||++++++|+++|++|++++|+...  ..+....+..++.++.+|++|.+++.++++       .
T Consensus         1 Ms-~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   77 (235)
T 3l6e_A            1 MS-LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQR--LQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGL   77 (235)
T ss_dssp             ---CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            66 6789999999999999999999999999999997531  111112223457889999999999888776       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        78 id~lvnnAg~   87 (235)
T 3l6e_A           78 PELVLHCAGT   87 (235)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            6888775543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=98.96  E-value=9.5e-10  Score=90.16  Aligned_cols=83  Identities=17%  Similarity=0.110  Sum_probs=60.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      |+++++++||||+|+||++++++|+++|++|+++ .|+..... ..+.+......+.++.+|++|.+++.++++.     
T Consensus         1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            7778899999999999999999999999999887 55432100 1111122225678899999999998887764     


Q ss_pred             --CCEEEEcccC
Q 043777           74 --VDVRFIPSEY   83 (231)
Q Consensus        74 --~d~~f~ps~~   83 (231)
                        +|++++....
T Consensus        81 g~id~lv~nAg~   92 (258)
T 3oid_A           81 GRLDVFVNNAAS   92 (258)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence              5888876543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.95  E-value=3.5e-09  Score=86.76  Aligned_cols=78  Identities=15%  Similarity=0.084  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +|+++||||+|+||++++++|+++|++|++++|+...  ..+....+..++.++.+|++|.+++.++++       ++|+
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMA--AQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999999999999999999999999999997421  111112222367889999999999988887       6899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        90 lv~~Ag~   96 (263)
T 3ak4_A           90 LCANAGV   96 (263)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            8886543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=98.94  E-value=2.3e-09  Score=87.02  Aligned_cols=81  Identities=16%  Similarity=0.093  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc------
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      .++++++||||+|+||++++++|+++|++|+++.|.... ...+..+.+   ...+.++.+|++|++++.++++      
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQ-KANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            447899999999999999999999999999999984311 111111122   2457788999999999988876      


Q ss_pred             -cCCEEEEcccC
Q 043777           73 -QVDVRFIPSEY   83 (231)
Q Consensus        73 -~~d~~f~ps~~   83 (231)
                       ++|++++....
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence             58998876543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=98.94  E-value=2.9e-09  Score=98.96  Aligned_cols=79  Identities=28%  Similarity=0.220  Sum_probs=62.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc--cCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK--QVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~--~~d~~f~   79 (231)
                      +|+|+||||||+||++++++|+++|++|++++|...... ..+.+..+. .++.++.+|++|.+++.++++  ++|++++
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih   90 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   90 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEE
Confidence            578999999999999999999999999999999754211 111112222 678899999999999999998  7999988


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      .+.
T Consensus        91 ~A~   93 (699)
T 1z45_A           91 FAG   93 (699)
T ss_dssp             CCS
T ss_pred             CCc
Confidence            654

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.94  E-value=3.3e-09  Score=86.60  Aligned_cols=79  Identities=13%  Similarity=0.011  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+.. ....+.+.....++.++.+|++|.+++.++++       ++|+
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            679999999999999999999999999999998763 11111111112457788999999999998887       7899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        83 lv~~Ag~   89 (255)
T 2q2v_A           83 LVNNAGI   89 (255)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8886543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.93  E-value=3.5e-09  Score=86.76  Aligned_cols=78  Identities=12%  Similarity=-0.036  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+...+.++.+|++|++++.++++       ++|+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEE--GKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997421  111112222347788999999999988887       6899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        85 lv~~Ag~   91 (260)
T 1nff_A           85 LVNNAGI   91 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8886543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=98.93  E-value=1.5e-09  Score=92.96  Aligned_cols=77  Identities=17%  Similarity=0.176  Sum_probs=57.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-------cCCcEEEEEcCCCHHHHHHHHcc--CC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-------HSGVFDYWGLLEDEKSLLEAVKQ--VD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-------~~~v~~~~~D~~d~~~l~~al~~--~d   75 (231)
                      |+|+|||||||||++++++|+++|++|++++|+..... .+.+..+       ..++.++.+|++|.+++.+++++  +|
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN-TERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc-hHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999753210 0111111       14678889999999999999986  69


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        81 ~vih~A~   87 (372)
T 1db3_A           81 EVYNLGA   87 (372)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9888544

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=98.93  E-value=2.2e-09  Score=88.19  Aligned_cols=79  Identities=14%  Similarity=0.112  Sum_probs=60.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh-----cCCcEEEEEcCCCHHHHHHHHcc----
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF-----HSGVFDYWGLLEDEKSLLEAVKQ----   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~D~~d~~~l~~al~~----   73 (231)
                      ++++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+     ..++.++.+|++|++++.++++.    
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEA--GVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999997421  11111111     13477889999999999888764    


Q ss_pred             ---CCEEEEcccC
Q 043777           74 ---VDVRFIPSEY   83 (231)
Q Consensus        74 ---~d~~f~ps~~   83 (231)
                         +|++++....
T Consensus        84 ~g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 FGRLDILVNNAGV   96 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence               6888876543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.92  E-value=2.7e-09  Score=86.27  Aligned_cols=80  Identities=14%  Similarity=0.050  Sum_probs=61.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+..... ..+.+.. ....+.++.+|++|.+++.++++       ++
T Consensus         7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   86 (248)
T 2pnf_A            7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGI   86 (248)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999742100 0111111 22467889999999999998887       68


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        87 d~vi~~Ag~   95 (248)
T 2pnf_A           87 DILVNNAGI   95 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            998886543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.92  E-value=5e-09  Score=84.56  Aligned_cols=77  Identities=22%  Similarity=0.138  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p   80 (231)
                      +|+++||||+|+||++++++|+++|++|++++|+...  ..+..+.. .+++++.+|++|.+++.+++++   +|++++.
T Consensus         7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSD--LVSLAKEC-PGIEPVCVDLGDWDATEKALGGIGPVDLLVNN   83 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhc-cCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence            5799999999999999999999999999999997421  11111111 4678889999999999999874   7988886


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        84 Ag~   86 (244)
T 1cyd_A           84 AAL   86 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.92  E-value=4.7e-09  Score=85.91  Aligned_cols=78  Identities=13%  Similarity=0.095  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+...+.++.+|++|++++.++++       ++|+
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIER--ARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999987421  112223334567889999999999988887       6899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        86 lv~~Ag~   92 (259)
T 4e6p_A           86 LVNNAAL   92 (259)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            8876543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.92  E-value=2.8e-09  Score=86.32  Aligned_cols=77  Identities=19%  Similarity=0.152  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+    ..++.++.+|++|.+++.++++       
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAET--LEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999997421  11111122    2457889999999999988887       


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      ++|++++...
T Consensus        80 ~id~li~~Ag   89 (250)
T 2cfc_A           80 AIDVLVNNAG   89 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899888554

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=98.92  E-value=6.3e-09  Score=86.11  Aligned_cols=80  Identities=13%  Similarity=0.054  Sum_probs=61.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+......+.++.+|++|.+++.++++       .+|
T Consensus        32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  111 (276)
T 3r1i_A           32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID  111 (276)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            579999999999999999999999999999999753211 111122222568889999999999988887       689


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus       112 ~lvnnAg~  119 (276)
T 3r1i_A          112 IAVCNAGI  119 (276)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            88875543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.92  E-value=3.7e-09  Score=85.46  Aligned_cols=80  Identities=14%  Similarity=0.061  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE-cCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI-RDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~-R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++. |+..... ..+.+......+.++.+|++|.+++.++++       ++
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   84 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRI   84 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999884 4432100 111111112467889999999999988876       68


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        85 d~vi~~Ag~   93 (247)
T 2hq1_A           85 DILVNNAGI   93 (247)
T ss_dssp             CEEEECC--
T ss_pred             CEEEECCCC
Confidence            998875543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.91  E-value=3.9e-09  Score=86.46  Aligned_cols=78  Identities=12%  Similarity=0.074  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+    ..++.++.+|++|.+++.++++       
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDR--LHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999997421  11111111    2457888999999999988886       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      ++|++++....
T Consensus        85 ~id~lv~~Ag~   95 (263)
T 3ai3_A           85 GADILVNNAGT   95 (263)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            68998876543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=98.91  E-value=3.6e-09  Score=85.12  Aligned_cols=80  Identities=20%  Similarity=0.021  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhh-hhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLR-VFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~-~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|+.|.+++|+..... ..+.+. .....+.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999753210 111111 222578889999999999988877       57


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        82 d~li~~Ag~   90 (235)
T 3l77_A           82 DVVVANAGL   90 (235)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            988876543

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=98.91  E-value=3.3e-09  Score=87.51  Aligned_cols=80  Identities=19%  Similarity=0.183  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+......+.++.+|++|.+++.++++.       +|
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  113 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTID  113 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999999764311 1111122235678899999999999888765       89


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus       114 ~li~~Ag~  121 (279)
T 3ctm_A          114 VFVANAGV  121 (279)
T ss_dssp             EEEECGGG
T ss_pred             EEEECCcc
Confidence            98886543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=98.91  E-value=3.7e-09  Score=86.33  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+.....  ..+.......++.++.+|++|.+++.++++.       +
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   93 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   93 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999654211  1111111235688899999999998887765       6


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        94 d~li~~Ag  101 (265)
T 1h5q_A           94 SGLIANAG  101 (265)
T ss_dssp             EEEEECCC
T ss_pred             CEEEECCC
Confidence            77776544

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=98.91  E-value=3.6e-09  Score=86.35  Aligned_cols=78  Identities=19%  Similarity=0.109  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ...+.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDAT--AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3789999999999999999999999999999997421  11111222   2457788999999999988887       6


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        80 id~lv~nAg~   89 (256)
T 1geg_A           80 FDVIVNNAGV   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8998876543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.91  E-value=5.5e-09  Score=85.31  Aligned_cols=78  Identities=15%  Similarity=0.027  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+....  .+....+...+.++.+|++|.+++.++++       .+|+
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAG--EEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH--HHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999986431  11112223567889999999999988887       6898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        85 lv~nAg~   91 (257)
T 3tpc_A           85 LVNCAGT   91 (257)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=98.90  E-value=7e-09  Score=84.86  Aligned_cols=79  Identities=15%  Similarity=0.148  Sum_probs=61.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC---CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG---HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g---~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--------   72 (231)
                      +++++||||+|+||++++++|+++|   +.|+++.|+.......+.+.....++.++.+|++|.+++.++++        
T Consensus        21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  100 (267)
T 1sny_A           21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD  100 (267)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999   99999999864311111111112578889999999999988887        


Q ss_pred             -cCCEEEEccc
Q 043777           73 -QVDVRFIPSE   82 (231)
Q Consensus        73 -~~d~~f~ps~   82 (231)
                       .+|++++...
T Consensus       101 ~~id~li~~Ag  111 (267)
T 1sny_A          101 QGLNVLFNNAG  111 (267)
T ss_dssp             GCCSEEEECCC
T ss_pred             CCccEEEECCC
Confidence             6899887654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.89  E-value=3.6e-09  Score=86.58  Aligned_cols=82  Identities=13%  Similarity=0.040  Sum_probs=62.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHc----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVK----   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~----   72 (231)
                      |.++++++||||+|+||++++++|+++|++|+++.|+..... .+..+.+    ..++.++.+|++|++++.++++    
T Consensus         1 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI-EKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHH-HHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHH-HHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            455789999999999999999999999999999998753101 1111111    2457788999999999888876    


Q ss_pred             ---cCCEEEEcccC
Q 043777           73 ---QVDVRFIPSEY   83 (231)
Q Consensus        73 ---~~d~~f~ps~~   83 (231)
                         .+|++++....
T Consensus        80 ~~g~iD~lv~~Ag~   93 (260)
T 1x1t_A           80 QMGRIDILVNNAGI   93 (260)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence               58998876543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=98.89  E-value=5.3e-09  Score=86.19  Aligned_cols=78  Identities=12%  Similarity=-0.014  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ..++.++.+|++|.+++.++++       +
T Consensus        31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG--LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHH--HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            5789999999999999999999999999999997421  11111122   2467889999999999888776       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       109 iD~li~~Ag~  118 (272)
T 1yb1_A          109 VSILVNNAGV  118 (272)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            7988876543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.89  E-value=5.6e-09  Score=86.37  Aligned_cols=78  Identities=21%  Similarity=0.118  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ...+.++.+|++|.+++.++++       +
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEG--LRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999997521  11111222   2457788999999999888776       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       100 iD~lv~~Ag~  109 (277)
T 2rhc_B          100 VDVLVNNAGR  109 (277)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8988876543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=98.89  E-value=4.6e-09  Score=86.51  Aligned_cols=83  Identities=13%  Similarity=0.047  Sum_probs=59.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      |+++++++||||+|+||++++++|+++|+.|.++.+......  ..+.+......+.++.+|++|.+++.++++      
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            555678999999999999999999999999988754432111  111111212467788999999999888776      


Q ss_pred             -cCCEEEEcccC
Q 043777           73 -QVDVRFIPSEY   83 (231)
Q Consensus        73 -~~d~~f~ps~~   83 (231)
                       .+|++++....
T Consensus       103 g~id~li~nAg~  114 (272)
T 4e3z_A          103 GRLDGLVNNAGI  114 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence             47888875543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=98.89  E-value=6e-09  Score=84.71  Aligned_cols=78  Identities=18%  Similarity=0.053  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ..++.++.+|++|++++.++++       +
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEK--LRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997421  11111222   2457888999999999888776       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        85 id~lv~nAg~   94 (247)
T 2jah_A           85 LDILVNNAGI   94 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8988875543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=98.88  E-value=3.1e-09  Score=86.94  Aligned_cols=77  Identities=9%  Similarity=0.090  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+   ...+.++.+|++|++++.++++       .
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK--LEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6799999999999999999999999999999997532  11111222   2467889999999999888776       5


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        84 id~lv~nAg   92 (257)
T 3imf_A           84 IDILINNAA   92 (257)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            788887544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=98.88  E-value=7.4e-09  Score=84.28  Aligned_cols=79  Identities=16%  Similarity=0.077  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCH-HHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDE-KSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~-~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++ |+++.|+.......+...... .++.++.+|++|. +++.++++       +
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   84 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT   84 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999997 888998753111111111111 3577889999998 88877766       6


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        85 id~lv~~Ag   93 (254)
T 1sby_A           85 VDILINGAG   93 (254)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            899887654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=98.88  E-value=3.3e-09  Score=86.83  Aligned_cols=79  Identities=9%  Similarity=0.080  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+.....  ..+........+.++.+|++|.+++.++++       .+
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   86 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKI   86 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999988753211  111112222567889999999999988886       58


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++.+.
T Consensus        87 d~lv~~Ag   94 (264)
T 3i4f_A           87 DFLINNAG   94 (264)
T ss_dssp             CEEECCCC
T ss_pred             CEEEECCc
Confidence            98887654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.88  E-value=5.1e-09  Score=85.66  Aligned_cols=78  Identities=15%  Similarity=0.133  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc--------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK--------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~--------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ..++.++.+|++|++++.++++        
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE--LNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997421  11111222   2356788999999999888774        


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      .+|++++....
T Consensus        87 ~id~lv~~Ag~   97 (260)
T 2ae2_A           87 KLNILVNNAGI   97 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            58988876543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.88  E-value=6.8e-09  Score=84.73  Aligned_cols=78  Identities=13%  Similarity=0.028  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+...+.++.+|++|++++.++++       ++|+
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEE--GAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6789999999999999999999999999999997421  111112222457788999999999988877       6899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        83 lv~nAg~   89 (254)
T 1hdc_A           83 LVNNAGI   89 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=98.88  E-value=5.5e-09  Score=85.96  Aligned_cols=82  Identities=20%  Similarity=0.154  Sum_probs=60.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhh---hhcCCcEEEEEcCCCHHHHHHHHc-----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLR---VFHSGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~---~~~~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      |.++++++||||+|+||++++++|+++|+.|.++.|+.... ..+...   .....+.++.+|++|.+++.++++     
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDH-VSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHH-HHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            44467899999999999999999999999999988654211 111111   112568899999999999888776     


Q ss_pred             --cCCEEEEcccC
Q 043777           73 --QVDVRFIPSEY   83 (231)
Q Consensus        73 --~~d~~f~ps~~   83 (231)
                        .+|++++....
T Consensus       101 ~g~id~li~nAg~  113 (269)
T 3gk3_A          101 FGKVDVLINNAGI  113 (269)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence              58988876544

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=98.88  E-value=4.1e-09  Score=97.39  Aligned_cols=76  Identities=21%  Similarity=0.191  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHH-HHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKS-LLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~-l~~al~~~d~~f~   79 (231)
                      ++|+|+|||||||||++++++|+++ |++|++++|+....  ..   ... .++.++.+|++|.++ +.++++++|++++
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~--~~---~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI--SR---FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTT--GG---GTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhh--hh---hccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            4678999999999999999999998 89999999975421  11   112 578899999999765 7888999999998


Q ss_pred             cccC
Q 043777           80 PSEY   83 (231)
Q Consensus        80 ps~~   83 (231)
                      ....
T Consensus       389 ~Aa~  392 (660)
T 1z7e_A          389 LVAI  392 (660)
T ss_dssp             CCCC
T ss_pred             Ccee
Confidence            6543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.88  E-value=4.6e-09  Score=85.42  Aligned_cols=78  Identities=12%  Similarity=0.060  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ...+.++.+|++|.+++.++++       .
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEA--AEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997432  11111222   2457788999999999888876       6


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            8998876543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=98.88  E-value=6.3e-09  Score=84.93  Aligned_cols=80  Identities=16%  Similarity=0.122  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+......+.++.+|++|.+++.++++      .+|+
T Consensus         7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~   86 (252)
T 3h7a_A            7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEV   86 (252)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceE
Confidence            578999999999999999999999999999999754211 111111212457789999999999988887      4688


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        87 lv~nAg~   93 (252)
T 3h7a_A           87 TIFNVGA   93 (252)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            7775543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.88  E-value=1.3e-08  Score=83.94  Aligned_cols=78  Identities=15%  Similarity=0.080  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+..++.++.+|++|.+++.++++       .+|+
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETD--LAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSC--HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999998643  122222334678889999999999988887       6898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        89 lv~nAg~   95 (271)
T 3tzq_B           89 VDNNAAH   95 (271)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.88  E-value=3.1e-09  Score=86.78  Aligned_cols=78  Identities=19%  Similarity=0.115  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc----------CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH----------SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~----------~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+.          .++.++.+|++|.+++.+++++
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAA--AQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            5789999999999999999999999999999997421  111111111          3577899999999999888876


Q ss_pred             C--------CEEEEcccC
Q 043777           74 V--------DVRFIPSEY   83 (231)
Q Consensus        74 ~--------d~~f~ps~~   83 (231)
                      +        |++++....
T Consensus        85 ~~~~~g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHHSSCCSEEEECCCC
T ss_pred             HHHHhCCCCeEEEECCCc
Confidence            3        988876543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.88  E-value=9.3e-09  Score=73.37  Aligned_cols=72  Identities=24%  Similarity=0.191  Sum_probs=60.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCchhhhhhhhh-cCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNFNFSLLRVF-HSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ++++|+|+|+ |++|+.+++.|.+.| ++|+++.|+..   +.   +.+ ..++..+.+|+.+.+.+.++++++|+++..
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~---~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   76 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLA---AL---AVLNRMGVATKQVDAKDEAGLAKALGGFDAVISA   76 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHH---HH---HHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHH---HH---HHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            3578999999 999999999999999 99999998642   11   122 267888999999999999999999998876


Q ss_pred             c
Q 043777           81 S   81 (231)
Q Consensus        81 s   81 (231)
                      .
T Consensus        77 ~   77 (118)
T 3ic5_A           77 A   77 (118)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=98.88  E-value=9.5e-09  Score=84.59  Aligned_cols=74  Identities=24%  Similarity=0.267  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..      .++... .++.++.+|++|.+++.++++       .+|
T Consensus        16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   89 (266)
T 3p19_A           16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE------RLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPAD   89 (266)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH------HHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH------HHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence            478999999999999999999999999999999742      122333 567889999999999988876       578


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus        90 ~lvnnAg~   97 (266)
T 3p19_A           90 AIVNNAGM   97 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            87775543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.88  E-value=5.1e-09  Score=85.92  Aligned_cols=74  Identities=19%  Similarity=0.344  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...     ..+.+. .++.++.+|++|.+++.++++       .+|
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD  101 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA-----SVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLR  101 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH-----HHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999999999998632     112222 457889999999999888776       478


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus       102 ~lv~nAg  108 (260)
T 3gem_A          102 AVVHNAS  108 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            8887554

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.87  E-value=4.4e-09  Score=86.02  Aligned_cols=78  Identities=15%  Similarity=0.082  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ...+..+.+|++|.+++.++++       +
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQEN--VDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999997521  11111222   2457788999999999888776       6


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        92 iD~lv~~Ag~  101 (260)
T 2zat_A           92 VDILVSNAAV  101 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8998876543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.87  E-value=3.6e-09  Score=86.30  Aligned_cols=79  Identities=15%  Similarity=0.122  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++|+||||+|+||++++++|+++|++|++++|+... ...+..+.+   ...+.++.+|++|.+++.++++       +
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKED-EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChH-HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999993211 111111222   2456788999999999888877       6


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        86 id~li~~Ag~   95 (261)
T 1gee_A           86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8998876543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.87  E-value=4.1e-09  Score=86.45  Aligned_cols=78  Identities=12%  Similarity=0.015  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++|+||||+|+||++++++|+++|++|+++.|..... ..+..+.+   ..++.++.+|++|.+++.++++       +
T Consensus        21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKA-AEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999843211 11111222   2467789999999999988887       6


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus       100 ~d~vi~~Ag  108 (274)
T 1ja9_A          100 LDFVMSNSG  108 (274)
T ss_dssp             EEEEECCCC
T ss_pred             CCEEEECCC
Confidence            788877544

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=98.87  E-value=1e-08  Score=83.35  Aligned_cols=79  Identities=13%  Similarity=0.003  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+... ...+.++.....+.++.+|++|++++.++++       ++|+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP-EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH-HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchh-HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997521 1111222223567889999999999887764       5899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        86 lv~nAg~   92 (249)
T 2ew8_A           86 LVNNAGI   92 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.87  E-value=6.5e-09  Score=84.22  Aligned_cols=78  Identities=13%  Similarity=0.060  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+.  .++.++.+|++|.+++.++++.       +
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDV--GEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999997421  111112222  4688899999999999888764       8


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        84 d~li~~Ag~   92 (251)
T 1zk4_A           84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            988876543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.87  E-value=7.1e-09  Score=84.81  Aligned_cols=78  Identities=9%  Similarity=0.019  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-----CCcEEEEEcCCCHHHHHHHHc------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-----SGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+.     .++.++.+|++|++++.++++      
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREK--LEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999997421  111111111     267889999999999988887      


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      ++|++++....
T Consensus        85 gid~lv~~Ag~   95 (260)
T 2z1n_A           85 GADILVYSTGG   95 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            58998886543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=98.87  E-value=4.4e-09  Score=87.69  Aligned_cols=80  Identities=10%  Similarity=-0.009  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh-cCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF-HSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+... ..++.++.+|++|.+++.++++.       +
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  105 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHP  105 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999752100 01111111 35688899999999999888765       4


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       106 d~li~~Ag~  114 (302)
T 1w6u_A          106 NIVINNAAG  114 (302)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            988876543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=98.86  E-value=7.9e-09  Score=82.97  Aligned_cols=80  Identities=24%  Similarity=0.211  Sum_probs=59.5

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            1 MAG-KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         1 M~~-~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      |.. +++|+||||+|+||++++++|+++|++|++++|+...  ..+..+.+ .++.++.+|++|.+++.++++       
T Consensus         1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKR--LQALAAEL-EGALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHS-TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHh-hhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            553 4679999999999999999999999999999996421  11111111 367889999999999888776       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      ++|++++....
T Consensus        78 ~id~li~~Ag~   88 (234)
T 2ehd_A           78 ELSALVNNAGV   88 (234)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            57888876543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.86  E-value=4.4e-10  Score=88.87  Aligned_cols=69  Identities=23%  Similarity=0.237  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ++|+|+||||||+||++++++|+++|+  +|++++|+...         ...++.++.+|++|.+++.+++  +|++++.
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~   72 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGS--IDTAFCC   72 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhh--hcEEEEC
Confidence            457999999999999999999999998  99999997631         1156778889999999888887  9998886


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      ..
T Consensus        73 a~   74 (215)
T 2a35_A           73 LG   74 (215)
T ss_dssp             CC
T ss_pred             ee
Confidence            54

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=98.86  E-value=8.1e-09  Score=84.68  Aligned_cols=72  Identities=15%  Similarity=0.135  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+....        ....+.++.+|++|++++.++++       ++|+
T Consensus        28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--------ADPDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC--------SSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------ccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            57899999999999999999999999999999975321        01467889999999999988877       6899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++.+..
T Consensus       100 lv~nAg~  106 (260)
T 3un1_A          100 LVNNAGV  106 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.86  E-value=7.6e-09  Score=84.98  Aligned_cols=80  Identities=16%  Similarity=0.047  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh--cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF--HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+...  ..++.++.+|++|.+++.++++       .
T Consensus        13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   92 (267)
T 1iy8_A           13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGR   92 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999752100 01111111  2457788999999999988876       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        93 id~lv~nAg~  102 (267)
T 1iy8_A           93 IDGFFNNAGI  102 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            7988876543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.86  E-value=7.2e-09  Score=83.36  Aligned_cols=68  Identities=15%  Similarity=0.064  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------cCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------QVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------~~d~~   77 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..           ...+.++.+|++|.+++.++++      ++|++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-----------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-----------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-----------ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            478999999999999999999999999999999752           1345788999999999999887      57887


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      ++...
T Consensus        71 i~~ag   75 (242)
T 1uay_A           71 VSAAG   75 (242)
T ss_dssp             EECCC
T ss_pred             EEccc
Confidence            77544

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=98.86  E-value=9e-09  Score=84.64  Aligned_cols=77  Identities=12%  Similarity=0.114  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+..+.+.  .++.++.+|++|.+++.++++       ++
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDH--GQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhH--HHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999886421  111122222  268889999999999988887       68


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        94 d~li~~Ag  101 (278)
T 2bgk_A           94 DIMFGNVG  101 (278)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99887544

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.86  E-value=4.5e-09  Score=82.46  Aligned_cols=63  Identities=22%  Similarity=0.200  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~   79 (231)
                      ++|+++||||+|+||++++++|+ +|++|++++|+..                .+.+|++|++++.+++++   +|++++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            35689999999999999999999 9999999998741                367899999999998886   788887


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      ...
T Consensus        65 ~ag   67 (202)
T 3d7l_A           65 ATG   67 (202)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=98.85  E-value=6.2e-09  Score=86.63  Aligned_cols=77  Identities=19%  Similarity=0.129  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p   80 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+...+.++.+|++|.+++.++++.   +|++++.
T Consensus        16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRK--GEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            5789999999999999999999999999999997531  1112222235678899999999999999985   5877775


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      +.
T Consensus        94 Ag   95 (291)
T 3rd5_A           94 AG   95 (291)
T ss_dssp             CC
T ss_pred             Cc
Confidence            44

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.85  E-value=1e-08  Score=83.26  Aligned_cols=78  Identities=17%  Similarity=0.119  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCc-EEEEEcCCCHHHHHHHHc------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGV-FDYWGLLEDEKSLLEAVK------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v-~~~~~D~~d~~~l~~al~------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+...+ .++.+|++|.+++.++++      ++|+
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAA--LDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            4689999999999999999999999999999997421  111112222345 788999999999988774      5898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        89 li~~Ag~   95 (254)
T 2wsb_A           89 LVNSAGI   95 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            8876543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=98.85  E-value=9.3e-09  Score=82.53  Aligned_cols=76  Identities=12%  Similarity=0.096  Sum_probs=59.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC----CEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV----DVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~----d~~f~p   80 (231)
                      |+++||||+|+||++++++|+++|+.|++++|+...  ..+..+.+...+.++.+|++|.+++.++++.+    |++++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~   79 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESK--LSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHS   79 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH--HHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEe
Confidence            579999999999999999999999999999997521  11122223356788999999999999999875    677765


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      ..
T Consensus        80 Ag   81 (230)
T 3guy_A           80 AG   81 (230)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.85  E-value=1.2e-08  Score=84.49  Aligned_cols=78  Identities=15%  Similarity=0.089  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|+.|++++|+...  ..+....+...+..+.+|++|.+++.++++       .+|+
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDA--AVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999987421  112222333668889999999999888776       5898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus       105 lv~nAg~  111 (277)
T 4dqx_A          105 LVNNAGF  111 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            8876543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.85  E-value=1.3e-08  Score=82.14  Aligned_cols=77  Identities=26%  Similarity=0.146  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~p   80 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.. .++.++.+|++|.+++.++++.   +|++++.
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   83 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD--LDSLVREC-PGIEPVCVDLGDWEATERALGSVGPVDLLVNN   83 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHc-CCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence            5789999999999999999999999999999987421  11111111 4677889999999999999873   7988876


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        84 Ag~   86 (244)
T 3d3w_A           84 AAV   86 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=98.85  E-value=1.4e-08  Score=86.07  Aligned_cols=80  Identities=21%  Similarity=0.198  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhh----hhhcCCcEEEEEcCCCHHHHHHHHc-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLL----RVFHSGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~----~~~~~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      +++++||||+|+||++++++|+++|+.|++..|+... +. +.+.+    .....++.++.+|++|.+++.++++     
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999997432 11 11111    1112568889999999999988887     


Q ss_pred             --cCCEEEEcccC
Q 043777           73 --QVDVRFIPSEY   83 (231)
Q Consensus        73 --~~d~~f~ps~~   83 (231)
                        ++|++++....
T Consensus        85 ~g~iD~lVnnAG~   97 (324)
T 3u9l_A           85 DGRIDVLIHNAGH   97 (324)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence              68998876554

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=98.85  E-value=4.9e-09  Score=87.42  Aligned_cols=81  Identities=14%  Similarity=0.115  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCH-HHHHHHHc-------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDE-KSLLEAVK-------   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~-~~l~~al~-------   72 (231)
                      ++++++||||+|+||++++++|+++|+.|++++|+..... ..+.+.... ..+.++.+|++|. +++..+++       
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999999999999753210 111111222 4688899999998 77766654       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      .+|++++.+..
T Consensus        91 ~iD~lv~nAg~  101 (311)
T 3o26_A           91 KLDILVNNAGV  101 (311)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            58998876554

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=98.85  E-value=8.3e-09  Score=84.29  Aligned_cols=80  Identities=11%  Similarity=0.032  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+.......+..+.+   ..++.++.+|++|.+++.++++       .
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999975310011111222   2467889999999999888776       6


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8998876543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=98.85  E-value=8.8e-09  Score=84.38  Aligned_cols=78  Identities=22%  Similarity=0.183  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+....+   ...+.++.+|++|++++.++++       +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREA--LEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999997421  11111222   2457788999999998887776       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        85 id~lv~nAg~   94 (262)
T 1zem_A           85 IDFLFNNAGY   94 (262)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8988876543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=98.85  E-value=8.4e-09  Score=84.23  Aligned_cols=74  Identities=14%  Similarity=0.104  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------cCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------QVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------~~d~~   77 (231)
                      +++++||||+|+||++++++|+++|++|++++|+.     .+..+.+...+.++.+|++|.+++.++++      .+|++
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG-----EDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC-----HHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch-----HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999954     22223334678899999999999988887      67887


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      ++...
T Consensus        84 v~nAg   88 (257)
T 3tl3_A           84 VNCAG   88 (257)
T ss_dssp             EECGG
T ss_pred             EECCC
Confidence            77544

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.85  E-value=8.9e-09  Score=85.82  Aligned_cols=79  Identities=16%  Similarity=0.084  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+.....  ..+........+.++.+|++|.+++.++++       .+
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  126 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL  126 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999753211  111112222567889999999999888776       57


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus       127 D~lvnnAg  134 (291)
T 3ijr_A          127 NILVNNVA  134 (291)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            88887543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.85  E-value=6.8e-09  Score=85.15  Aligned_cols=80  Identities=16%  Similarity=0.037  Sum_probs=61.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+.... ..+.++.+|++|++++.++++       .+
T Consensus        10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (262)
T 3pk0_A           10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGI   89 (262)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999999753200 111112222 467889999999999888776       68


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        90 d~lvnnAg~   98 (262)
T 3pk0_A           90 DVVCANAGV   98 (262)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            998875543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=98.85  E-value=5.2e-09  Score=85.77  Aligned_cols=78  Identities=17%  Similarity=0.057  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+   ...+.++.+|++|.+++.++++.       
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK--LRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999999997532  11111222   24577889999999998887764       


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++.+..
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            7988886554

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.84  E-value=8e-09  Score=84.78  Aligned_cols=76  Identities=17%  Similarity=0.164  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ...+.++.+|++|.+++.++++       .
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVER--LEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997432  11111222   2567889999999999888776       4


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|++++..
T Consensus        89 id~lv~nA   96 (264)
T 3ucx_A           89 VDVVINNA   96 (264)
T ss_dssp             CSEEEECC
T ss_pred             CcEEEECC
Confidence            78888755

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=98.84  E-value=6.4e-09  Score=86.82  Aligned_cols=79  Identities=15%  Similarity=0.122  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-----hcCCcEEEEEcCCCHHHHHHHHcc----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-----FHSGVFDYWGLLEDEKSLLEAVKQ----   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-----~~~~v~~~~~D~~d~~~l~~al~~----   73 (231)
                      +++|+||||+|+||++++++|+++|++|++++|+..... ..+.+..     ...++.++.+|++|.+++.++++.    
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   97 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT   97 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999742100 0111111     124678899999999999888864    


Q ss_pred             ---CCEEEEccc
Q 043777           74 ---VDVRFIPSE   82 (231)
Q Consensus        74 ---~d~~f~ps~   82 (231)
                         +|++++...
T Consensus        98 ~g~id~li~~Ag  109 (303)
T 1yxm_A           98 FGKINFLVNNGG  109 (303)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence               899888654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=98.84  E-value=5.9e-09  Score=87.24  Aligned_cols=67  Identities=19%  Similarity=0.128  Sum_probs=57.4

Q ss_pred             eEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS   81 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps   81 (231)
                      +|+|||||||||++++++|+++  |++|++++|+...   .       .++.++.+|++|.+++.++++  ++|++++.+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~---~-------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD---T-------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCC---C-------TTCCEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcc---c-------cCceEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence            5899999999999999999998  8999999987531   0       246788999999999999998  799999865


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        71 ~   71 (317)
T 3ajr_A           71 G   71 (317)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.84  E-value=6.8e-09  Score=84.86  Aligned_cols=80  Identities=15%  Similarity=0.057  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+......+.++.+|++|.+++.++++       .+|
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   91 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT   91 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999753200 111112222567889999999999888776       589


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus        92 ~lv~nAg~   99 (256)
T 3gaf_A           92 VLVNNAGG   99 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            88875543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.84  E-value=1.4e-08  Score=82.99  Aligned_cols=78  Identities=18%  Similarity=0.144  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+...+.++.+|++|.+++.++++       .+|+
T Consensus         9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAG--AERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5789999999999999999999999999999997531  112222334678899999999999888776       5788


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        87 li~~Ag~   93 (261)
T 3n74_A           87 LVNNAGI   93 (261)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            8876543

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.84  E-value=9.4e-09  Score=84.60  Aligned_cols=78  Identities=10%  Similarity=0.120  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh----cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF----HSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+    ...+.++.+|++|.+++.++++       
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEE--ASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999997421  11111122    2457788999999999888776       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      ++|++++....
T Consensus        99 ~iD~lvnnAg~  109 (267)
T 1vl8_A           99 KLDTVVNAAGI  109 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            58998876543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.84  E-value=1.3e-08  Score=82.64  Aligned_cols=76  Identities=16%  Similarity=0.027  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+..+.  .++.++.+|++|++++.+++++       +|+
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP--LREAAEA--VGAHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHT--TTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHH--cCCEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997421  1111111  2478899999999998887764       798


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=98.84  E-value=9.3e-09  Score=86.12  Aligned_cols=78  Identities=13%  Similarity=0.040  Sum_probs=61.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|+.|++++|+...  ..+..+.+   ...+.++.+|++|.+++.++++       .
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPA--LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999997532  11112222   2467889999999999988876       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            8988876554

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=98.84  E-value=9e-09  Score=84.79  Aligned_cols=81  Identities=15%  Similarity=0.057  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      ++++++||||+|+||++++++|+++|+.|++..++.....  ..+.+......+.++.+|++|.+++.++++       .
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999998866543211  111112222567888999999999888776       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       106 iD~lvnnAG~  115 (267)
T 3u5t_A          106 VDVLVNNAGI  115 (267)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7887775543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=98.84  E-value=7.3e-09  Score=85.57  Aligned_cols=78  Identities=22%  Similarity=0.238  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-----CCcEEEEEcCCCHHHHHHHHc------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-----SGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      +++++||||+|+||+++++.|+++|++|++++|+...  ..+..+.+.     ..+.++.+|++|.+++.++++      
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGN--IEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHH--HHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999997421  111111111     246778999999999888776      


Q ss_pred             -cCCEEEEcccC
Q 043777           73 -QVDVRFIPSEY   83 (231)
Q Consensus        73 -~~d~~f~ps~~   83 (231)
                       ++|++++....
T Consensus       110 g~iD~vi~~Ag~  121 (279)
T 1xg5_A          110 SGVDICINNAGL  121 (279)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence             68998876543

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.84  E-value=1.6e-08  Score=83.05  Aligned_cols=70  Identities=14%  Similarity=0.121  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...          ..++.++.+|++|.+++.++++       ++|+
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997531          2457889999999999988876       5899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        78 lv~~Ag~   84 (264)
T 2dtx_A           78 LVNNAGI   84 (264)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=98.84  E-value=1e-08  Score=84.46  Aligned_cols=80  Identities=18%  Similarity=0.061  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+.....  ..+.++.....+.++.+|++|.+++.++++       ++
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  108 (271)
T 4iin_A           29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGL  108 (271)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999643211  111112222568889999999999888876       58


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       109 d~li~nAg~  117 (271)
T 4iin_A          109 SYLVNNAGV  117 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            888875543

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=98.84  E-value=6.9e-09  Score=84.93  Aligned_cols=77  Identities=14%  Similarity=0.047  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc--------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK--------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~--------   72 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+....+   ...+.++.+|++|.+++.++++        
T Consensus        14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE--LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999997421  11111222   2467888999999999888773        


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      ++|++++...
T Consensus        92 ~id~li~~Ag  101 (266)
T 1xq1_A           92 KLDILINNLG  101 (266)
T ss_dssp             CCSEEEEECC
T ss_pred             CCcEEEECCC
Confidence            5798887554

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.84  E-value=2.1e-08  Score=81.59  Aligned_cols=71  Identities=17%  Similarity=0.089  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...       ..  .++..+.+|++|++++.++++       ++|+
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------EQ--YPFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------SC--CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------hc--CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997531       11  247788999999999988886       5898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        78 lv~~Ag~   84 (250)
T 2fwm_X           78 LVNAAGI   84 (250)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            8875543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.84  E-value=5e-09  Score=86.46  Aligned_cols=77  Identities=10%  Similarity=0.000  Sum_probs=60.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---c---CCcEEEEEcCCCHHHHHHHHc-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---H---SGVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~---~~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   .   .++.++.+|++|++++.++++     
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAER--LEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999997421  11111122   1   357788999999999988887     


Q ss_pred             --cCCEEEEccc
Q 043777           73 --QVDVRFIPSE   82 (231)
Q Consensus        73 --~~d~~f~ps~   82 (231)
                        ++|++++...
T Consensus        84 ~g~id~lv~~Ag   95 (278)
T 1spx_A           84 FGKLDILVNNAG   95 (278)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence              6899887554

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.83  E-value=1e-08  Score=85.09  Aligned_cols=80  Identities=9%  Similarity=0.061  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhh-cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVF-HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~-~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+.....  ..+.+... ...+.++.+|++|.+++.++++       .
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  104 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGG  104 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCC
Confidence            578999999999999999999999999999998542111  11112222 2567888999999999988876       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       105 iD~lv~nAg~  114 (281)
T 3v2h_A          105 ADILVNNAGV  114 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7988875543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.83  E-value=1e-08  Score=83.01  Aligned_cols=80  Identities=15%  Similarity=0.064  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+..... ..+.+......+.++.+|++|.+++.++++.       +|
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID   84 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            678999999999999999999999999999999753210 1111112225678899999999998887764       68


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus        85 ~li~~Ag~   92 (247)
T 3lyl_A           85 ILVNNAGI   92 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            88875543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=98.83  E-value=1.4e-08  Score=84.90  Aligned_cols=79  Identities=19%  Similarity=0.097  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+.... ..+.++.+|++|.+++.++++       .+
T Consensus        41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  120 (293)
T 3rih_A           41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGAL  120 (293)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999764211 111112222 467889999999998887765       46


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus       121 D~lvnnAg  128 (293)
T 3rih_A          121 DVVCANAG  128 (293)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            88887544

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.83  E-value=2.4e-08  Score=81.51  Aligned_cols=75  Identities=21%  Similarity=0.148  Sum_probs=59.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...   .+..+.+ .. .++.+|++|.+++.++++       .+|+
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~-~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG---KEVAEAI-GG-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH---HHHHHHH-TC-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH---HHHHHHh-hC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997632   1111222 24 788999999999888776       4798


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        81 lv~~Ag~   87 (256)
T 2d1y_A           81 LVNNAAI   87 (256)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.83  E-value=5.6e-09  Score=84.26  Aligned_cols=80  Identities=16%  Similarity=0.144  Sum_probs=58.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++ .|+..... ..+.++.....+.++.+|++|.+++.++++       ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999999885 56532100 011111112457788999999999988887       58


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            998886543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=98.82  E-value=1.2e-08  Score=84.33  Aligned_cols=78  Identities=17%  Similarity=0.009  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|+.|.+++|+...  ..+..+.+...+.++.+|++|.+++.++++       .+|+
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDA--LQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997421  112222333678899999999999988876       6898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876554

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.82  E-value=8.8e-09  Score=84.61  Aligned_cols=78  Identities=14%  Similarity=0.056  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+..++.++.+|++|.+++.++++.       +|+
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERL--LAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            5789999999999999999999999999999997421  1111222224678889999999998887764       688


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        84 lvnnAg~   90 (263)
T 2a4k_A           84 VAHFAGV   90 (263)
T ss_dssp             EEEGGGG
T ss_pred             EEECCCC
Confidence            8875543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=98.82  E-value=5.6e-09  Score=84.47  Aligned_cols=71  Identities=13%  Similarity=-0.038  Sum_probs=57.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---------c
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---------Q   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---------~   73 (231)
                      ++++++||||+|+||++++++|+++|++|++++|+....         ......+.+|++|++++.++++         +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc---------cCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999999999999999999975320         1234567899999999888776         5


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        77 iD~lv~~Ag   85 (241)
T 1dhr_A           77 VDAILCVAG   85 (241)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEEccc
Confidence            788777554

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.82  E-value=1.2e-08  Score=84.65  Aligned_cols=79  Identities=16%  Similarity=0.092  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+.... ..+..+.+   ...+.++.+|++|++++.++++       .
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEG-VAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHH-HHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999998754211 11111222   2567889999999999888776       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       108 iD~lvnnAg~  117 (280)
T 4da9_A          108 IDCLVNNAGI  117 (280)
T ss_dssp             CCEEEEECC-
T ss_pred             CCEEEECCCc
Confidence            8988875543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.82  E-value=1e-08  Score=84.96  Aligned_cols=78  Identities=18%  Similarity=0.154  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||+++++.|+++|++|+++.|+...  ..+..+.+   ...+.++.+|++|.+++.++++       +
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKS--CDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHH--HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHH--HHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998876421  11111222   2457788999999999988875       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       122 id~li~~Ag~  131 (285)
T 2c07_A          122 VDILVNNAGI  131 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7988876543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=98.82  E-value=1e-08  Score=84.74  Aligned_cols=79  Identities=11%  Similarity=0.110  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhh-hhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLL-RVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~-~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+ ......+.++.+|++|.+++.++++       .+
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  106 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRI  106 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999753200 01111 1122568889999999999888776       57


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus       107 d~lv~nAg  114 (277)
T 4fc7_A          107 DILINCAA  114 (277)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            88887554

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.82  E-value=1.3e-08  Score=83.95  Aligned_cols=81  Identities=16%  Similarity=0.093  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC--------ch--hhh---hhhhhcCCcEEEEEcCCCHHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS--------NF--NFS---LLRVFHSGVFDYWGLLEDEKSLLEA   70 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~--~~~---~~~~~~~~v~~~~~D~~d~~~l~~a   70 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...        ..  ..+   .+......+.++.+|++|++++.++
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   92 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA   92 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            5789999999999999999999999999999987310        01  111   1112225788899999999999888


Q ss_pred             Hc-------cCCEEEEcccCC
Q 043777           71 VK-------QVDVRFIPSEYG   84 (231)
Q Consensus        71 l~-------~~d~~f~ps~~g   84 (231)
                      ++       .+|++++.....
T Consensus        93 ~~~~~~~~g~id~lv~nAg~~  113 (278)
T 3sx2_A           93 LQAGLDELGRLDIVVANAGIA  113 (278)
T ss_dssp             HHHHHHHHCCCCEEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCC
Confidence            87       589988865543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.82  E-value=1.4e-08  Score=83.57  Aligned_cols=78  Identities=21%  Similarity=0.146  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|+.|.++.|+...  ..+..+.+...+.++.+|++|.+++.++++       .+|+
T Consensus        27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDK--LKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999986421  112222333678889999999999888776       5898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus       105 lvnnAg~  111 (266)
T 3grp_A          105 LVNNAGI  111 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=98.82  E-value=5.9e-09  Score=86.49  Aligned_cols=77  Identities=18%  Similarity=0.132  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+.... ..+.++.+|++|.+++.++++       ++
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  107 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGL  107 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999753100 011111112 257788999999999888776       58


Q ss_pred             CEEEEc
Q 043777           75 DVRFIP   80 (231)
Q Consensus        75 d~~f~p   80 (231)
                      |++++.
T Consensus       108 D~li~n  113 (286)
T 1xu9_A          108 DMLILN  113 (286)
T ss_dssp             SEEEEC
T ss_pred             CEEEEC
Confidence            988875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.81  E-value=1.3e-08  Score=82.54  Aligned_cols=77  Identities=14%  Similarity=0.076  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---cCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---QVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---~~d~~f~p   80 (231)
                      .++|+||||+|+||++++++|+++|++|++++|+...  ..+..+.+...+.++.+|++|.+++.++++   ++|++++.
T Consensus        14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEK--LKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHH--HHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            6789999999999999999999999999999996421  112222333678889999999999999887   47888875


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      ..
T Consensus        92 Ag   93 (249)
T 3f9i_A           92 AG   93 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=98.81  E-value=1.7e-08  Score=83.20  Aligned_cols=77  Identities=17%  Similarity=0.128  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+ .++.++.+|++|.+++.++++       .+|+
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESG--GRALEQEL-PGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHh-cCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999987421  11111111 457889999999999988776       5798


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        86 lv~nAg~   92 (270)
T 1yde_A           86 VVNNAGH   92 (270)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8876543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=98.81  E-value=1.3e-08  Score=82.86  Aligned_cols=78  Identities=15%  Similarity=0.077  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+..+.+...+..+.+|++|++++.++++       .+|+
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESG--AQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999987421  111222233456788999999999988877       5899


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        87 lv~nAg~   93 (248)
T 3op4_A           87 LVNNAGI   93 (248)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=98.81  E-value=6e-09  Score=88.04  Aligned_cols=78  Identities=13%  Similarity=0.063  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---c--CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---H--SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~--~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      +++++||||+|+||++++++|+++|+.|++++|+...  ..+....+   .  ..+.++.+|++|.+++.++++.     
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDS--IDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999997532  11111222   1  2678899999999999888864     


Q ss_pred             --CCEEEEcccC
Q 043777           74 --VDVRFIPSEY   83 (231)
Q Consensus        74 --~d~~f~ps~~   83 (231)
                        +|++++....
T Consensus        86 g~id~lv~nAg~   97 (319)
T 3ioy_A           86 GPVSILCNNAGV   97 (319)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence              5888776543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.81  E-value=1.4e-08  Score=83.73  Aligned_cols=80  Identities=16%  Similarity=0.071  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|+.|.++.|+.....  ..+.+......+.++.+|++|.+++.++++       .+
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i  107 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRL  107 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999988542111  111112222567889999999999888776       57


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       108 d~lv~nAg~  116 (269)
T 4dmm_A          108 DVLVNNAGI  116 (269)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            988875543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=98.81  E-value=1.8e-08  Score=83.07  Aligned_cols=80  Identities=14%  Similarity=0.100  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|+.|.++.|+.....  ..+.+......+.++.+|++|.+++.++++       .+
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  110 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGL  110 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999877642111  111122223567789999999999988877       58


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       111 D~lvnnAg~  119 (271)
T 3v2g_A          111 DILVNSAGI  119 (271)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            988875543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=98.81  E-value=1.2e-08  Score=84.24  Aligned_cols=80  Identities=14%  Similarity=-0.014  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|+..... ..+.+......+..+.+|++|.+++.++++       .+|
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALN  107 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999743100 111112222567889999999999888776       589


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus       108 ~lvnnAg~  115 (270)
T 3ftp_A          108 VLVNNAGI  115 (270)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            88876543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.81  E-value=8.2e-09  Score=83.35  Aligned_cols=78  Identities=13%  Similarity=-0.026  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-   72 (231)
                      +++|+||||+|+||++++++|+++|+       .|+++.|+...  ..+....+   ...+.++.+|++|.+++.++++ 
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD--LEKISLECRAEGALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH--HHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHH--HHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence            47899999999999999999999999       89999986421  11111122   2457788999999999988876 


Q ss_pred             ------cCCEEEEcccC
Q 043777           73 ------QVDVRFIPSEY   83 (231)
Q Consensus        73 ------~~d~~f~ps~~   83 (231)
                            .+|++++....
T Consensus        80 ~~~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHHHTSCCSEEEECCCC
T ss_pred             HHHhCCCCCEEEEcCCc
Confidence                  58998876543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.80  E-value=1.2e-08  Score=82.96  Aligned_cols=78  Identities=14%  Similarity=0.058  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+....+...+.++.+|++|.+++.++++       .+|+
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEG--AKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            6799999999999999999999999999999887421  112222334667888999999999988876       5898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        84 lv~nAg~   90 (247)
T 3rwb_A           84 LVNNASI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=98.80  E-value=1.7e-08  Score=83.21  Aligned_cols=78  Identities=14%  Similarity=0.125  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc--------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK--------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~--------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ..++.++.+|++|++++.++++        
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE--LDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999997421  11111222   2467889999999999888773        


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      .+|++++....
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            57888875543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.80  E-value=1.1e-08  Score=84.73  Aligned_cols=77  Identities=14%  Similarity=0.056  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---C---CcEEEEEcCCCHHHHHHHHc-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---S---GVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~---~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+.   .   ++.++.+|++|.+++.++++     
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSER--LEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999997521  111111221   2   57889999999999888776     


Q ss_pred             --cCCEEEEccc
Q 043777           73 --QVDVRFIPSE   82 (231)
Q Consensus        73 --~~d~~f~ps~   82 (231)
                        .+|++++...
T Consensus        84 ~g~iD~lv~nAg   95 (280)
T 1xkq_A           84 FGKIDVLVNNAG   95 (280)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence              5898887554

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.80  E-value=8.3e-09  Score=84.12  Aligned_cols=78  Identities=12%  Similarity=0.018  Sum_probs=60.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+..++.++.+|++|.+++.++++.       +|+
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAA--GQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999986421  1111222235678889999999998887764       688


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        84 lv~~Ag~   90 (253)
T 1hxh_A           84 LVNNAGI   90 (253)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.80  E-value=1.1e-08  Score=84.72  Aligned_cols=79  Identities=14%  Similarity=0.057  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcC---CcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHS---GVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~---~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+.....   .+.++.+|++|++++.++++       
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHG   90 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999998753200 1111112111   57788999999999888776       


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      .+|++++...
T Consensus        91 ~id~lv~nAg  100 (281)
T 3svt_A           91 RLHGVVHCAG  100 (281)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            4688887554

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=98.79  E-value=1.5e-08  Score=82.48  Aligned_cols=77  Identities=22%  Similarity=0.198  Sum_probs=60.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~~   77 (231)
                      |+++||||+|+||++++++|+++|++|.++.|+...  ..+..+.+...+.++.+|++|++++.++++       ++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQER--LQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            579999999999999999999999999999997421  111222233567889999999999999887       47888


Q ss_pred             EEcccC
Q 043777           78 FIPSEY   83 (231)
Q Consensus        78 f~ps~~   83 (231)
                      ++....
T Consensus        79 vnnAg~   84 (248)
T 3asu_A           79 VNNAGL   84 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            876543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.79  E-value=9.6e-09  Score=82.84  Aligned_cols=77  Identities=16%  Similarity=0.063  Sum_probs=57.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEE-EcCCCCchhhhhhhhh---cCCcEE-EEEcCCCHHHHHHHHc-------
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-IRDSASNFNFSLLRVF---HSGVFD-YWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~R~~~~~~~~~~~~~~---~~~v~~-~~~D~~d~~~l~~al~-------   72 (231)
                      ++|+||||+|+||++++++|+++|++|+++ .|+...  ..+..+.+   ...+.. +.+|++|.+++.++++       
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREK--AEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHH--HHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            689999999999999999999999999988 665321  11111122   234566 8899999999888765       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      ++|++++....
T Consensus        80 ~~d~li~~Ag~   90 (245)
T 2ph3_A           80 GLDTLVNNAGI   90 (245)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            68998886544

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.79  E-value=1.9e-08  Score=83.16  Aligned_cols=80  Identities=13%  Similarity=0.004  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc--------h--hhh---hhhhhcCCcEEEEEcCCCHHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN--------F--NFS---LLRVFHSGVFDYWGLLEDEKSLLEA   70 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~--------~--~~~---~~~~~~~~v~~~~~D~~d~~~l~~a   70 (231)
                      +++++||||+|+||++++++|+++|++|++++|+....        .  ..+   .+......+.++.+|++|.+++.++
T Consensus        10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   89 (287)
T 3pxx_A           10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE   89 (287)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            57899999999999999999999999999999873210        1  011   1111125678899999999998887


Q ss_pred             Hc-------cCCEEEEcccC
Q 043777           71 VK-------QVDVRFIPSEY   83 (231)
Q Consensus        71 l~-------~~d~~f~ps~~   83 (231)
                      ++       .+|++++....
T Consensus        90 ~~~~~~~~g~id~lv~nAg~  109 (287)
T 3pxx_A           90 LANAVAEFGKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCCc
Confidence            76       58988875543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.79  E-value=2.3e-08  Score=81.91  Aligned_cols=80  Identities=10%  Similarity=0.059  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCCh--hHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGR--IGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~--iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+  ||++++++|+++|++|+++.|+..... ..+...... ..+.++.+|++|.+++.++++       
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG   86 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            578999999987  999999999999999999998743211 112222233 368899999999999888776       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      .+|++++....
T Consensus        87 ~id~li~~Ag~   97 (266)
T 3oig_A           87 VIHGIAHCIAF   97 (266)
T ss_dssp             CCCEEEECCCC
T ss_pred             CeeEEEEcccc
Confidence            47888775543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.79  E-value=1.8e-08  Score=83.39  Aligned_cols=78  Identities=19%  Similarity=0.152  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+..++.++.+|++|++++.++++       .+|+
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDA--ADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999987421  112222334678899999999999888776       5788


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus       107 lvnnAg~  113 (277)
T 3gvc_A          107 LVANAGV  113 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875443

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.79  E-value=1.6e-08  Score=82.31  Aligned_cols=81  Identities=17%  Similarity=0.138  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      ++++|+||||+|+||++++++|+++|+.|+++.|......  ..+.+......+.++.+|++|.+++.++++       .
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE   91 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            3678999999999999999999999999998885433211  111122222568889999999999888877       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        92 id~lv~~Ag~  101 (256)
T 3ezl_A           92 IDVLVNNAGI  101 (256)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            6877775443

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.79  E-value=1.7e-08  Score=82.62  Aligned_cols=78  Identities=13%  Similarity=0.094  Sum_probs=58.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+.....  ..+.+......+.++.+|++|.+++.++++       .+
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEI   87 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999998866543211  111122222567889999999999988876       46


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |++++..
T Consensus        88 d~lv~nA   94 (259)
T 3edm_A           88 HGLVHVA   94 (259)
T ss_dssp             EEEEECC
T ss_pred             CEEEECC
Confidence            8777654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=98.79  E-value=6.4e-09  Score=85.85  Aligned_cols=78  Identities=15%  Similarity=0.089  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+   ..++.++.+|++|.+++.++++       .
T Consensus        26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSR--VAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH--HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            5789999999999999999999999999999886432  11122222   2567888999999999988887       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8988875543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=98.78  E-value=3e-08  Score=82.32  Aligned_cols=80  Identities=13%  Similarity=0.148  Sum_probs=61.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--------hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--------NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--------~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+.....        ..+.+......+.++.+|++|.+++.++++   
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   88 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTV   88 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999864210        011112222567788999999999888776   


Q ss_pred             ----cCCEEEEcccC
Q 043777           73 ----QVDVRFIPSEY   83 (231)
Q Consensus        73 ----~~d~~f~ps~~   83 (231)
                          .+|++++....
T Consensus        89 ~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           89 EQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHSCCSEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence                58988875543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.78  E-value=1.5e-08  Score=82.88  Aligned_cols=78  Identities=18%  Similarity=0.192  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+..++.++.+|++|.+++.++++       .+|+
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESN--IARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4789999999999999999999999999999997421  112222333567889999999999887765       4687


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        86 lv~nAg~   92 (255)
T 4eso_A           86 LHINAGV   92 (255)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            7775443

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=98.78  E-value=1.1e-08  Score=84.28  Aligned_cols=80  Identities=15%  Similarity=0.095  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc-CCCCc-hhhhhhhhh-cCCcEEEEEcCCCH----HHHHHHHc----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR-DSASN-FNFSLLRVF-HSGVFDYWGLLEDE----KSLLEAVK----   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R-~~~~~-~~~~~~~~~-~~~v~~~~~D~~d~----~~l~~al~----   72 (231)
                      +++++||||+|+||++++++|+++|++|++++| +.... ...+.+... ...+.++.+|++|.    +++.++++    
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   90 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   90 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999 53210 001111111 24578899999999    88887776    


Q ss_pred             ---cCCEEEEcccC
Q 043777           73 ---QVDVRFIPSEY   83 (231)
Q Consensus        73 ---~~d~~f~ps~~   83 (231)
                         ++|++++....
T Consensus        91 ~~g~id~lv~nAg~  104 (276)
T 1mxh_A           91 AFGRCDVLVNNASA  104 (276)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence               58998876543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.78  E-value=2e-08  Score=83.04  Aligned_cols=80  Identities=14%  Similarity=0.040  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc--------h--hhhh---hhhhcCCcEEEEEcCCCHHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN--------F--NFSL---LRVFHSGVFDYWGLLEDEKSLLEA   70 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~--------~--~~~~---~~~~~~~v~~~~~D~~d~~~l~~a   70 (231)
                      +++++||||+|+||++++++|+++|++|++++|+....        .  ..+.   +......+.++.+|++|++++.++
T Consensus        10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   89 (281)
T 3s55_A           10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF   89 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            57899999999999999999999999999999963210        1  1111   112225678899999999998888


Q ss_pred             Hc-------cCCEEEEcccC
Q 043777           71 VK-------QVDVRFIPSEY   83 (231)
Q Consensus        71 l~-------~~d~~f~ps~~   83 (231)
                      ++       .+|++++....
T Consensus        90 ~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           90 VAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHhcCCCCEEEECCCC
Confidence            76       58988875543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=98.78  E-value=1.1e-08  Score=84.09  Aligned_cols=79  Identities=20%  Similarity=0.106  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+..... ..+.+.. ....+.++.+|++|.+++.++++       .+
T Consensus        20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   99 (266)
T 4egf_A           20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGL   99 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999753200 1111111 23578899999999999887776       58


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus       100 d~lv~nAg  107 (266)
T 4egf_A          100 DVLVNNAG  107 (266)
T ss_dssp             SEEEEECC
T ss_pred             CEEEECCC
Confidence            98887544

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=98.78  E-value=2.8e-08  Score=82.11  Aligned_cols=80  Identities=15%  Similarity=0.065  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+......+..+.+|++|.+++.++++      .+|+
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~  112 (275)
T 4imr_A           33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDI  112 (275)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCE
Confidence            578999999999999999999999999999999764311 111112222567889999999998887776      5788


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus       113 lvnnAg~  119 (275)
T 4imr_A          113 LVINASA  119 (275)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=98.78  E-value=1.9e-08  Score=83.55  Aligned_cols=78  Identities=18%  Similarity=0.094  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|+.|.+++|+...  ..+..+.+   ...+.++.+|++|++++.++++       .
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTE--VEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5689999999999999999999999999999997532  11112222   2467789999999999888776       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++.+..
T Consensus       106 iD~lVnnAg~  115 (283)
T 3v8b_A          106 LDIVVANAGI  115 (283)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8988875543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=98.78  E-value=2.3e-08  Score=82.54  Aligned_cols=77  Identities=17%  Similarity=0.080  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|....   .+..+.+   ...+.++.+|++|.+++.++.+      .+
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV---KEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHH---HHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH---HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999976321   1112222   2457788999999998877654      58


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            988875543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=98.78  E-value=2.2e-08  Score=82.22  Aligned_cols=79  Identities=15%  Similarity=-0.000  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|+.|.++.++.... ..+..+.+   ...+.++.+|++|.+++.++++       .
T Consensus        26 ~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           26 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAG-AQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999998877654211 11111222   2578889999999999888876       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       105 id~li~nAg~  114 (267)
T 4iiu_A          105 WYGVVSNAGI  114 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             ccEEEECCCC
Confidence            7888775443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.78  E-value=1.4e-08  Score=84.90  Aligned_cols=77  Identities=9%  Similarity=0.022  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---C---CcEEEEEcCCCHHHHHHHHc-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---S---GVFDYWGLLEDEKSLLEAVK-----   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~---~v~~~~~D~~d~~~l~~al~-----   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+.   .   .+.++.+|++|.+++.++++     
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDR--LEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999997421  111111221   2   57889999999999888876     


Q ss_pred             --cCCEEEEccc
Q 043777           73 --QVDVRFIPSE   82 (231)
Q Consensus        73 --~~d~~f~ps~   82 (231)
                        .+|++++...
T Consensus       104 ~g~iD~lvnnAG  115 (297)
T 1xhl_A          104 FGKIDILVNNAG  115 (297)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence              5898887554

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=98.78  E-value=2.1e-08  Score=82.56  Aligned_cols=79  Identities=14%  Similarity=0.107  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|.++.|+.....  ..+.+......+.++.+|++|.+++.++++       .+
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   97 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHL   97 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999887643211  111122223567889999999999888776       47


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        98 d~lvnnAg  105 (270)
T 3is3_A           98 DIAVSNSG  105 (270)
T ss_dssp             CEEECCCC
T ss_pred             CEEEECCC
Confidence            88877544

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.77  E-value=6.9e-09  Score=83.59  Aligned_cols=72  Identities=17%  Similarity=0.098  Sum_probs=57.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--------   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--------   72 (231)
                      |. +++++||||+|+||++++++|+++|++|++++|+...         ......++.+|++|.+++.++++        
T Consensus         1 m~-~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            1 MS-SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND---------QADSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             -C-CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT---------TSSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccc---------cccccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            54 5789999999999999999999999999999997632         01234567899999998887776        


Q ss_pred             -cCCEEEEccc
Q 043777           73 -QVDVRFIPSE   82 (231)
Q Consensus        73 -~~d~~f~ps~   82 (231)
                       ++|++++...
T Consensus        71 g~id~lv~~Ag   81 (236)
T 1ooe_A           71 SQVDGVFCVAG   81 (236)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence             5788877554

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=98.77  E-value=2.8e-08  Score=81.85  Aligned_cols=71  Identities=18%  Similarity=0.193  Sum_probs=58.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++|+||||+|+||++++++|+++|++|++++|+...         ....+..+.+|++|.+++.++++       .+|+
T Consensus        14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKS---------DVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC-----------CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh---------ccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6799999999999999999999999999999997531         11356788999999999888776       5898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        85 lv~nAg~   91 (269)
T 3vtz_A           85 LVNNAGI   91 (269)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            8876543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=98.77  E-value=4e-08  Score=81.05  Aligned_cols=79  Identities=15%  Similarity=0.137  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-----hhhh---hhhhcCCcEEEEEcCCCHHHHHHHHc---
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-----NFSL---LRVFHSGVFDYWGLLEDEKSLLEAVK---   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-----~~~~---~~~~~~~v~~~~~D~~d~~~l~~al~---   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+.....     ..+.   +......+.++.+|++|.+++.++++   
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   85 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATV   85 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999999999864310     0111   11112467788999999999888776   


Q ss_pred             ----cCCEEEEccc
Q 043777           73 ----QVDVRFIPSE   82 (231)
Q Consensus        73 ----~~d~~f~ps~   82 (231)
                          .+|++++...
T Consensus        86 ~~~g~iD~lvnnAG   99 (274)
T 3e03_A           86 DTFGGIDILVNNAS   99 (274)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence                5788887554

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=98.77  E-value=8.3e-09  Score=84.39  Aligned_cols=76  Identities=14%  Similarity=0.032  Sum_probs=58.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+..+.+   ...+.++.+|++|++++.++++.       
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDT--LRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            6789999999999999999999999999999987421  11111222   24577889999999988776643       


Q ss_pred             -CCEEEEcc
Q 043777           74 -VDVRFIPS   81 (231)
Q Consensus        74 -~d~~f~ps   81 (231)
                       +|++++..
T Consensus        83 ~id~lvnnA   91 (260)
T 2qq5_A           83 RLDVLVNNA   91 (260)
T ss_dssp             CCCEEEECC
T ss_pred             CceEEEECC
Confidence             58888765

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=98.77  E-value=1.9e-08  Score=83.15  Aligned_cols=75  Identities=16%  Similarity=0.118  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------cCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------QVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------~~d~~   77 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+...+.++.+|++|.+++.++++      .+|++
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEK--GKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            4689999999999999999999999999999997421  122223334678899999999999988886      35666


Q ss_pred             EEc
Q 043777           78 FIP   80 (231)
Q Consensus        78 f~p   80 (231)
                      ++.
T Consensus       108 v~~  110 (281)
T 3ppi_A          108 VVA  110 (281)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=98.77  E-value=1.2e-08  Score=84.37  Aligned_cols=77  Identities=17%  Similarity=0.131  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+.  .++.++.+|++|.+++.++++       .+
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEA--CADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999987421  111122222  257778899999999888776       58


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus       107 D~lvnnAg  114 (276)
T 2b4q_A          107 DILVNNAG  114 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            98887554

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.76  E-value=2.5e-08  Score=82.56  Aligned_cols=80  Identities=14%  Similarity=0.037  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+.....  ..+.+......+.++.+|++|.+++.++++       .+
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  108 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKL  108 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999753110  011111222467889999999998877765       47


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       109 D~lv~~Ag~  117 (283)
T 1g0o_A          109 DIVCSNSGV  117 (283)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            988876543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=98.76  E-value=4.5e-08  Score=79.32  Aligned_cols=76  Identities=14%  Similarity=0.131  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---cCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---QVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---~~d~~f~p   80 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...   .+.+..+ .++.++.+|++|++++.++++   ++|++++.
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~   81 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESK---LQELEKY-PGIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HGGGGGS-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHhc-cCceEEEeeCCCHHHHHHHHHHhCCCCEEEEC
Confidence            5789999999999999999999999999999987421   1111111 367889999999999987754   57988875


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        82 Ag~   84 (246)
T 2ag5_A           82 AGF   84 (246)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=98.76  E-value=2.2e-08  Score=82.73  Aligned_cols=77  Identities=18%  Similarity=0.129  Sum_probs=59.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccC-------C
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQV-------D   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~-------d   75 (231)
                      ++++||||+|+||++++++|+++|++|++++|+...  ..+..+.+.  .++.++.+|++|.+++.++++.+       |
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREER--LQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999997421  111112222  36788999999999999988764       8


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            87775543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=98.76  E-value=2.5e-08  Score=81.48  Aligned_cols=65  Identities=25%  Similarity=0.293  Sum_probs=55.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps~   82 (231)
                      |+|+||||||+||++++++|++ |++|++++|+...       .   .+   +.+|++|.+++.+++++  +|++++...
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-------~---~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-------Q---GG---YKLDLTDFPRLEDFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-------T---TC---EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-------C---CC---ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence            4799999999999999999994 8999999997521       1   22   78999999999999987  999998654


Q ss_pred             C
Q 043777           83 Y   83 (231)
Q Consensus        83 ~   83 (231)
                      .
T Consensus        67 ~   67 (273)
T 2ggs_A           67 M   67 (273)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.75  E-value=2.1e-08  Score=82.13  Aligned_cols=80  Identities=18%  Similarity=0.053  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCC-hhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIG-RIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG-~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+| +||++++++|+++|++|++++|+..... ..+.+.... .++.++.+|++|.+++.++++       .
T Consensus        22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (266)
T 3o38_A           22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGR  101 (266)
T ss_dssp             TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999997 6999999999999999999999753210 111111222 578899999999999888776       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       102 id~li~~Ag~  111 (266)
T 3o38_A          102 LDVLVNNAGL  111 (266)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            6888876544

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.75  E-value=1.8e-08  Score=82.24  Aligned_cols=74  Identities=20%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~~   77 (231)
                      |+|+||||+++||++++++|+++|++|.+.+|+...   .+.+..-..++..+++|++|++++.++++       .+|+.
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKR---SADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            899999999999999999999999999999997421   11111112567889999999998877665       37876


Q ss_pred             EEcc
Q 043777           78 FIPS   81 (231)
Q Consensus        78 f~ps   81 (231)
                      ....
T Consensus        80 VNNA   83 (247)
T 3ged_A           80 VNNA   83 (247)
T ss_dssp             EECC
T ss_pred             EECC
Confidence            6544

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.74  E-value=8.3e-09  Score=85.60  Aligned_cols=77  Identities=18%  Similarity=0.086  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...  ..+....+   ...+.++.+|++|++++.++++       .
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA--LAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHH--HHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999987531  11122222   2567788999999999888776       5


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|++++...
T Consensus        86 iD~lvnnAg   94 (280)
T 3tox_A           86 LDTAFNNAG   94 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            898887554

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=98.74  E-value=3.1e-08  Score=80.69  Aligned_cols=80  Identities=16%  Similarity=0.046  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcC--CCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLL--EDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~--~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+.... ..+.++.+|+  +|.+++.++++       
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   91 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYP   91 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999753200 111111112 3788899999  99998887776       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      .+|++++....
T Consensus        92 ~id~lv~nAg~  102 (252)
T 3f1l_A           92 RLDGVLHNAGL  102 (252)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            57888875543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=98.74  E-value=2.3e-08  Score=81.21  Aligned_cols=83  Identities=17%  Similarity=0.111  Sum_probs=60.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ----   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~----   73 (231)
                      |.++++++||||+|+||++++++|+++|+.|.++.++.... ..+....+   ...+.++.+|++|.+++.++++.    
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE-AEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHH-HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            44578999999999999999999999999998876554221 11111222   24567789999999988777654    


Q ss_pred             ---------CCEEEEcccCC
Q 043777           74 ---------VDVRFIPSEYG   84 (231)
Q Consensus        74 ---------~d~~f~ps~~g   84 (231)
                               +|++++.....
T Consensus        83 ~~~~~~~~~id~lv~nAg~~  102 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIG  102 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCC
T ss_pred             hcccccCCcccEEEECCCCC
Confidence                     77777765443

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=98.74  E-value=3.6e-08  Score=80.49  Aligned_cols=69  Identities=22%  Similarity=0.234  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...   .       ..+.++.+|++|++++.++++.       +|+
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~-------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP---P-------EGFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC---C-------TTSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh---h-------ccceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997531   0       2367889999999998887764       688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        91 lv~nAg   96 (253)
T 2nm0_A           91 LIANAG   96 (253)
T ss_dssp             EEEECS
T ss_pred             EEECCC
Confidence            877543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=98.74  E-value=3.5e-08  Score=81.58  Aligned_cols=80  Identities=15%  Similarity=0.002  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC---------ch--hhhh---hhhhcCCcEEEEEcCCCHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS---------NF--NFSL---LRVFHSGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~---------~~--~~~~---~~~~~~~v~~~~~D~~d~~~l~~   69 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...         +.  ..+.   +......+.++.+|++|.+++.+
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   94 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE   94 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            5789999999999999999999999999999984210         11  1111   11112567788999999999988


Q ss_pred             HHc-------cCCEEEEcccC
Q 043777           70 AVK-------QVDVRFIPSEY   83 (231)
Q Consensus        70 al~-------~~d~~f~ps~~   83 (231)
                      +++       .+|++++....
T Consensus        95 ~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           95 LVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            876       58988875543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.73  E-value=3e-08  Score=81.17  Aligned_cols=80  Identities=13%  Similarity=0.126  Sum_probs=59.7

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+  |+||++++++|+++|++|++++|+.......+.+......+.++.+|++|++++.++++       ++
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999  99999999999999999999999752111111111111347889999999999988876       57


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        88 D~lv~~Ag~   96 (261)
T 2wyu_A           88 DYLVHAIAF   96 (261)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            888875543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=98.73  E-value=3.9e-08  Score=80.66  Aligned_cols=80  Identities=18%  Similarity=0.089  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhh-hc-CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRV-FH-SGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~-~~-~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+.. .. ..+..+.+|++|.+++.++++       .
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGC   87 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999753210 1111111 22 347889999999999887775       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus        88 id~lvnnAg~   97 (265)
T 3lf2_A           88 ASILVNNAGQ   97 (265)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7888875543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=98.73  E-value=2.9e-08  Score=82.41  Aligned_cols=80  Identities=18%  Similarity=0.077  Sum_probs=60.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC-CCc-hhhhhhh-hhcCCcEEEEEcCCC----HHHHHHHHc----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS-ASN-FNFSLLR-VFHSGVFDYWGLLED----EKSLLEAVK----   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~-~~~-~~~~~~~-~~~~~v~~~~~D~~d----~~~l~~al~----   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+. ... ...+.+. .....+.++.+|++|    .+++.++++    
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~  102 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFR  102 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999975 210 0111111 112467889999999    888877776    


Q ss_pred             ---cCCEEEEcccC
Q 043777           73 ---QVDVRFIPSEY   83 (231)
Q Consensus        73 ---~~d~~f~ps~~   83 (231)
                         .+|++++....
T Consensus       103 ~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          103 AFGRCDVLVNNASA  116 (288)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence               58988875543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=98.72  E-value=4.7e-08  Score=80.98  Aligned_cols=77  Identities=13%  Similarity=0.107  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...  ..+........+.++.+|++|.+++.++++       .+|+
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAER--LRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHH--HHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6789999999999999999999999999999987421  112222233678889999999998887776       4688


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        83 lvnnAg   88 (281)
T 3zv4_A           83 LIPNAG   88 (281)
T ss_dssp             EECCCC
T ss_pred             EEECCC
Confidence            776544

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.72  E-value=2.7e-08  Score=82.97  Aligned_cols=80  Identities=16%  Similarity=0.020  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch---hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF---NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~---~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+||++++++|+++|++|.++.|+.....   ..+.+......+.++.+|++|.+++.++++       .
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  128 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGG  128 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999888632111   111122222567788999999998887775       5


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       129 iD~lv~nAg~  138 (294)
T 3r3s_A          129 LDILALVAGK  138 (294)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            7988876543

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=98.72  E-value=2.4e-08  Score=82.85  Aligned_cols=80  Identities=11%  Similarity=-0.071  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..... ..+.+.... ..+.++.+|++|.+++.++++       .+
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  112 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARL  112 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999753200 111111112 335889999999999888776       46


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       113 D~lvnnAG~  121 (281)
T 4dry_A          113 DLLVNNAGS  121 (281)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            888876543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.72  E-value=6.9e-09  Score=83.95  Aligned_cols=67  Identities=16%  Similarity=0.136  Sum_probs=55.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc----cCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK----QVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~----~~d~~f~p   80 (231)
                      |+|+||||+|+||++++++|+++|++|++++|+....         ..   .+.+|++|.+++.++++    ++|++++.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~---~~~~D~~~~~~~~~~~~~~~~~~d~vi~~   69 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI---------EA---DLSTPGGRETAVAAVLDRCGGVLDGLVCC   69 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE---------EC---CTTSHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc---------cc---cccCCcccHHHHHHHHHHcCCCccEEEEC
Confidence            5899999999999999999999999999999975320         01   15689999999999887    78999886


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        70 Ag~   72 (255)
T 2dkn_A           70 AGV   72 (255)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=98.72  E-value=3.1e-08  Score=81.26  Aligned_cols=79  Identities=13%  Similarity=0.098  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|+.|+++.|...... ..+....+.   ..+.++.+|++|.+++.++++       
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   90 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFG   90 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999988542211 111122222   457788999999999988876       


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      .+|++++...
T Consensus        91 ~iD~lvnnAg  100 (262)
T 3ksu_A           91 KVDIAINTVG  100 (262)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            4688777544

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=98.72  E-value=5.3e-08  Score=78.58  Aligned_cols=72  Identities=18%  Similarity=0.140  Sum_probs=56.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +|+++||||+|+||++++++|+++|++|++++|+...     ..+.+  ++..+.+|++| +++.++++       ++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~-----~~~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE-----AAQSL--GAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-----HHHHH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHhh--CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999997521     11222  37788999999 77665544       5898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        74 lv~~Ag~   80 (239)
T 2ekp_A           74 LVHAAAV   80 (239)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.72  E-value=4.2e-08  Score=80.36  Aligned_cols=80  Identities=10%  Similarity=0.008  Sum_probs=59.0

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+  |+||++++++|+++|++|++++|+.......+.+........++.+|++|++++.++++       .+
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF   88 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999  99999999999999999999999762111111111111234788999999999988876       46


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        89 D~lv~~Ag~   97 (265)
T 1qsg_A           89 DGFVHSIGF   97 (265)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            887775543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=98.71  E-value=2.6e-08  Score=81.16  Aligned_cols=80  Identities=15%  Similarity=0.030  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh--c-CCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF--H-SGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~--~-~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|++|.+++|+..... ..+.+...  . ..+.++.+|++|.+++.++++       
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYG   86 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999753210 11111111  2 567889999999999888776       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      .+|++++....
T Consensus        87 ~iD~lvnnAg~   97 (250)
T 3nyw_A           87 AVDILVNAAAM   97 (250)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            36887775543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=98.71  E-value=6.5e-08  Score=86.37  Aligned_cols=81  Identities=19%  Similarity=0.184  Sum_probs=61.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccC---
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQV---   74 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~---   74 (231)
                      +.++++||||+|+||+++++.|+++|+. |++++|+....+ ..+....+.   ..+.++.+|++|.+++.++++++   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            3578999999999999999999999986 888899753211 112222222   45778899999999999999876   


Q ss_pred             ---CEEEEcccC
Q 043777           75 ---DVRFIPSEY   83 (231)
Q Consensus        75 ---d~~f~ps~~   83 (231)
                         |.+++....
T Consensus       305 g~ld~VIh~AG~  316 (486)
T 2fr1_A          305 VPLSAVFHAAAT  316 (486)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCcEEEECCcc
Confidence               778876543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=98.71  E-value=4.9e-08  Score=80.91  Aligned_cols=80  Identities=15%  Similarity=0.036  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC------------ch--hhhhhhhh---cCCcEEEEEcCCCHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS------------NF--NFSLLRVF---HSGVFDYWGLLEDEKS   66 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~------------~~--~~~~~~~~---~~~v~~~~~D~~d~~~   66 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...            +.  ..+..+.+   ...+.++.+|++|+++
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   90 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA   90 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence            5789999999999999999999999999999986211            01  11111111   2567889999999999


Q ss_pred             HHHHHc-------cCCEEEEcccC
Q 043777           67 LLEAVK-------QVDVRFIPSEY   83 (231)
Q Consensus        67 l~~al~-------~~d~~f~ps~~   83 (231)
                      +.++++       .+|++++....
T Consensus        91 v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           91 LKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcc
Confidence            988776       58988876544

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=98.70  E-value=5.4e-08  Score=80.21  Aligned_cols=80  Identities=10%  Similarity=0.092  Sum_probs=59.6

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+  |+||++++++|+++|++|++++|+.......+.+.....++.++.+|++|.+++.++++       .+
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   85 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL   85 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999  99999999999999999999999863111111111111347789999999999888776       46


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        86 d~lv~nAg~   94 (275)
T 2pd4_A           86 DFIVHSVAF   94 (275)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCcc
Confidence            887775543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=98.70  E-value=5.4e-08  Score=80.65  Aligned_cols=80  Identities=10%  Similarity=0.024  Sum_probs=59.7

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+  |+||++++++|+++|++|++++|+.......+.+.....++.++.+|++|.+++.++++       ++
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  100 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL  100 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999  99999999999999999999999752111111111111346788999999999888776       57


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       101 D~lv~~Ag~  109 (285)
T 2p91_A          101 DIIVHSIAY  109 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            988876543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=98.69  E-value=3.8e-08  Score=80.82  Aligned_cols=79  Identities=15%  Similarity=0.110  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh-c-CCcEEEEEcCCCHHHHHHHHc---cCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF-H-SGVFDYWGLLEDEKSLLEAVK---QVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~---~~d~~   77 (231)
                      +++++||||+|+||++++++|+++|++|.+++|+..... ..+.+... . ..+..+.+|++|.+++.++++   .+|++
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   89 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDIL   89 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEE
Confidence            478999999999999999999999999999999753200 11111111 1 345678899999999988887   57888


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      ++...
T Consensus        90 v~nAg   94 (267)
T 3t4x_A           90 INNLG   94 (267)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            87544

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=98.69  E-value=5.1e-08  Score=78.81  Aligned_cols=80  Identities=19%  Similarity=0.049  Sum_probs=59.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcC--CCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLL--EDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~--~d~~~l~~al~-------   72 (231)
                      +++++||||+|+||++++++|+++|++|.+++|+..... ..+.+.... ..+.++.+|+  +|.+++.++++       
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g   93 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFG   93 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999753210 111122222 4667788887  89888877665       


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      .+|++++....
T Consensus        94 ~id~lv~nAg~  104 (247)
T 3i1j_A           94 RLDGLLHNASI  104 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            57988876543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.69  E-value=4.9e-08  Score=79.85  Aligned_cols=79  Identities=11%  Similarity=0.157  Sum_probs=60.3

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc-------
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      +|+++||||+|  +||++++++|.++|++|.+..|+..... ..+.++... .++..+++|++|++++.++++       
T Consensus         6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (256)
T 4fs3_A            6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG   85 (256)
T ss_dssp             TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            68999999986  8999999999999999999999753211 122233333 568889999999998877665       


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      .+|+.+....
T Consensus        86 ~iD~lvnnAg   95 (256)
T 4fs3_A           86 NIDGVYHSIA   95 (256)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEeccc
Confidence            3788776543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.69  E-value=1.2e-08  Score=86.53  Aligned_cols=82  Identities=21%  Similarity=0.097  Sum_probs=57.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~   72 (231)
                      |.++|||+||||+||||++++..|+++|+       +|+++++.............+. ..+.++ +|+.+.+.+.++++
T Consensus         1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhC
Confidence            77778999999999999999999999986       7888877531000000011121 122333 68877777889999


Q ss_pred             cCCEEEEcccC
Q 043777           73 QVDVRFIPSEY   83 (231)
Q Consensus        73 ~~d~~f~ps~~   83 (231)
                      ++|+++|....
T Consensus        80 ~~D~Vih~Ag~   90 (327)
T 1y7t_A           80 DADYALLVGAA   90 (327)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            99999996554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.69  E-value=4.3e-08  Score=80.26  Aligned_cols=80  Identities=9%  Similarity=0.048  Sum_probs=59.8

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++|+||||+  |+||++++++|+++|++|.+++|+.......+.+......+.++.+|++|.+++.++++.       +
T Consensus        14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   93 (271)
T 3ek2_A           14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL   93 (271)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999  999999999999999999999997422111111111114578899999999999888873       5


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus        94 d~lv~nAg~  102 (271)
T 3ek2_A           94 DGLVHSIGF  102 (271)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCcc
Confidence            777775443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=98.68  E-value=1.3e-07  Score=84.87  Aligned_cols=81  Identities=19%  Similarity=0.200  Sum_probs=62.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc--CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ--VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~--~d   75 (231)
                      +.++++||||+|+||+++++.|.++|+. |+++.|+....+ ..+....+.   ..+.++.+|++|.+++.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            3578999999999999999999999985 888888753211 112222332   3477889999999999999986  89


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      .+++....
T Consensus       338 ~VVh~AGv  345 (511)
T 2z5l_A          338 AVFHTAGI  345 (511)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99886543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=98.68  E-value=9.6e-08  Score=81.62  Aligned_cols=79  Identities=14%  Similarity=0.153  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--------hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--------NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--------~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+....+        ..+.+......+.++.+|++|.+++.++++   
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~  124 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI  124 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999865311        011111212456778999999999888876   


Q ss_pred             ----cCCEEEEccc
Q 043777           73 ----QVDVRFIPSE   82 (231)
Q Consensus        73 ----~~d~~f~ps~   82 (231)
                          ++|++++...
T Consensus       125 ~~~g~iDilVnnAG  138 (346)
T 3kvo_A          125 KKFGGIDILVNNAS  138 (346)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence                5888887544

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=98.68  E-value=9e-08  Score=77.67  Aligned_cols=70  Identities=24%  Similarity=0.246  Sum_probs=55.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|+++.|+...   .       ..+..+.+|++|++++.++++       .+|+
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA---P-------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC---C-------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH---H-------HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997532   1       111237899999999888776       4788


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        85 lv~~Ag~   91 (247)
T 1uzm_A           85 LVSNAGL   91 (247)
T ss_dssp             EEEECSC
T ss_pred             EEECCCC
Confidence            8875543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.68  E-value=7.7e-08  Score=78.93  Aligned_cols=78  Identities=19%  Similarity=0.104  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +|+++||||+++||++++++|.++|+.|.+.+|+.......+.+.....++..+.+|++|++++.++++.       +|+
T Consensus         7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi   86 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG   86 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            6899999999999999999999999999999998643111112222236788899999999988776653       787


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      .+...
T Consensus        87 LVNnA   91 (258)
T 4gkb_A           87 LVNNA   91 (258)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            66544

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.68  E-value=8.5e-08  Score=80.03  Aligned_cols=79  Identities=10%  Similarity=0.049  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|  +||++++++|+++|++|.+++|+..... ..+..... ..+.++.+|++|.+++.++++       .
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999997  9999999999999999999999753211 11111111 456789999999999888876       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       109 iD~lVnnAG~  118 (296)
T 3k31_A          109 LDFVVHAVAF  118 (296)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            7888876544

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=98.68  E-value=5.1e-08  Score=78.89  Aligned_cols=73  Identities=14%  Similarity=0.130  Sum_probs=57.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHh-CCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-----cCC
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIE-YGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-----QVD   75 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~-~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-----~~d   75 (231)
                      .++++++||||+|+||++++++|++ .|+.|.+..|+....         ...+.++.+|++|.+++.++++     .+|
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id   72 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIKNVSFD   72 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTTTCCEE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHHhCCCC
Confidence            3467899999999999999999999 788898888875311         1456789999999999998886     467


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      ++++....
T Consensus        73 ~lv~nAg~   80 (244)
T 4e4y_A           73 GIFLNAGI   80 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            77775443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=98.68  E-value=4.1e-08  Score=82.90  Aligned_cols=80  Identities=15%  Similarity=0.024  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC--------Cchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA--------SNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~--------~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~   72 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..        .....+....+.   ..+.++.+|++|.+++.++++
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  106 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ  106 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            578999999999999999999999999999988610        011111222222   456778899999999888776


Q ss_pred             -------cCCEEEEcccC
Q 043777           73 -------QVDVRFIPSEY   83 (231)
Q Consensus        73 -------~~d~~f~ps~~   83 (231)
                             .+|++++....
T Consensus       107 ~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          107 TAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHSCCCEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence                   58988875543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=98.67  E-value=6.6e-08  Score=80.77  Aligned_cols=79  Identities=11%  Similarity=0.034  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC--------ch--hhhhh---hhhcCCcEEEEEcCCCHHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS--------NF--NFSLL---RVFHSGVFDYWGLLEDEKSLLEA   70 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~--~~~~~---~~~~~~v~~~~~D~~d~~~l~~a   70 (231)
                      +++++||||+|+||++++++|+++|+.|++++|+...        +.  ..+..   ......+.++.+|++|.+++.++
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~  107 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA  107 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            5789999999999999999999999999999987321        01  11111   12225678899999999998887


Q ss_pred             Hc-------cCCEEEEccc
Q 043777           71 VK-------QVDVRFIPSE   82 (231)
Q Consensus        71 l~-------~~d~~f~ps~   82 (231)
                      ++       .+|++++...
T Consensus       108 ~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          108 VDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHhCCCCEEEECCC
Confidence            76       5888887544

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=98.66  E-value=6.8e-08  Score=79.71  Aligned_cols=80  Identities=14%  Similarity=0.042  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC---------ch--hhhhhhhh---cCCcEEEEEcCCCHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS---------NF--NFSLLRVF---HSGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~---------~~--~~~~~~~~---~~~v~~~~~D~~d~~~l~~   69 (231)
                      +++++||||+|+||++++++|+++|++|.+++|+...         +.  ..+..+.+   ...+.++.+|++|.+++.+
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   90 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK   90 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            5789999999999999999999999999999984210         11  11111111   2567888999999999888


Q ss_pred             HHcc-------CCEEEEcccC
Q 043777           70 AVKQ-------VDVRFIPSEY   83 (231)
Q Consensus        70 al~~-------~d~~f~ps~~   83 (231)
                      +++.       +|++++....
T Consensus        91 ~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           91 VVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            7763       8988875543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=98.66  E-value=9e-08  Score=79.11  Aligned_cols=79  Identities=9%  Similarity=0.032  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCCh--hHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGR--IGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~--iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +++++||||+|+  ||++++++|+++|++|.+++|+... ...+.+......+.++.+|++|.+++.++++.       +
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK-DRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH-HHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH-HHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            579999999966  9999999999999999999998621 11111111125688999999999998887764       5


Q ss_pred             CEEEEcccC
Q 043777           75 DVRFIPSEY   83 (231)
Q Consensus        75 d~~f~ps~~   83 (231)
                      |++++....
T Consensus       105 d~li~nAg~  113 (280)
T 3nrc_A          105 DAIVHSIAF  113 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            888875543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.66  E-value=4.7e-08  Score=80.34  Aligned_cols=78  Identities=15%  Similarity=0.038  Sum_probs=59.8

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---------
Q 043777            4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---------   72 (231)
Q Consensus         4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---------   72 (231)
                      +++++||||  +|+||++++++|+++|++|+++.|+.... ..+..+.+...+.++.+|++|++++.++++         
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL-IQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH-HHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH-HHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999  99999999999999999999999975210 011122223457789999999999888776         


Q ss_pred             -cCCEEEEccc
Q 043777           73 -QVDVRFIPSE   82 (231)
Q Consensus        73 -~~d~~f~ps~   82 (231)
                       .+|++++...
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence             6788777544

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.66  E-value=6.9e-08  Score=80.49  Aligned_cols=79  Identities=13%  Similarity=0.109  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCCh--hHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGR--IGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~--iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +++++||||+|+  ||++++++|+++|+.|.++.|+...... .+..... ..+.++.+|++|.+++.++++       .
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETLEKKWGK  109 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999977  9999999999999999999987421000 1111111 467889999999999888776       4


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|++++....
T Consensus       110 iD~lVnnAG~  119 (293)
T 3grk_A          110 LDFLVHAIGF  119 (293)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            7888876543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.65  E-value=7.3e-08  Score=78.40  Aligned_cols=68  Identities=13%  Similarity=0.160  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...           .....+.+|++|.+++.++++.       +|+
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~   90 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP-----------NADHSFTIKDSGEEEIKSVIEKINSKSIKVDT   90 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------TSSEEEECSCSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc-----------ccccceEEEeCCHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999998632           1123577899999998888765       477


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        91 li~~Ag   96 (251)
T 3orf_A           91 FVCAAG   96 (251)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            776544

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=98.64  E-value=7.3e-08  Score=81.24  Aligned_cols=80  Identities=15%  Similarity=0.045  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC--------ch--hhhhhh---hhcCCcEEEEEcCCCHHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS--------NF--NFSLLR---VFHSGVFDYWGLLEDEKSLLEA   70 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~--------~~--~~~~~~---~~~~~v~~~~~D~~d~~~l~~a   70 (231)
                      +++++||||+|+||++++++|+++|+.|++++|+...        ..  ..+...   .....+.++.+|++|++++.++
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  125 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV  125 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            5789999999999999999999999999999886321        01  011111   1125678889999999998888


Q ss_pred             Hc-------cCCEEEEcccC
Q 043777           71 VK-------QVDVRFIPSEY   83 (231)
Q Consensus        71 l~-------~~d~~f~ps~~   83 (231)
                      ++       .+|++++....
T Consensus       126 ~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          126 VDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            76       58988875543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=98.64  E-value=8.5e-08  Score=81.24  Aligned_cols=80  Identities=20%  Similarity=0.156  Sum_probs=60.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhh------cCCcEEEEEcCCCHHHHHHHHcc---
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVF------HSGVFDYWGLLEDEKSLLEAVKQ---   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~------~~~v~~~~~D~~d~~~l~~al~~---   73 (231)
                      +++|+||||+|+||++++++|+++|+.|+++.|+..... ..+.++..      ..++.++.+|++|.+++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            578999999999999999999999999988887643211 11111111      14678899999999999999886   


Q ss_pred             --CCEEEEcccC
Q 043777           74 --VDVRFIPSEY   83 (231)
Q Consensus        74 --~d~~f~ps~~   83 (231)
                        +|++++....
T Consensus        82 g~iD~lVnnAG~   93 (327)
T 1jtv_A           82 GRVDVLVCNAGL   93 (327)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence              7888876543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.64  E-value=6.9e-08  Score=79.81  Aligned_cols=76  Identities=17%  Similarity=0.173  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +|.++||||+++||+.++++|.++|++|.+.+|+...  ..+..+++...+..+++|++|++++.++++.       +|+
T Consensus        29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~--l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDV--LDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997521  1223344456678899999999998877764       566


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      .+...
T Consensus       107 LVNNA  111 (273)
T 4fgs_A          107 LFVNA  111 (273)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            55433

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.63  E-value=5.4e-08  Score=79.63  Aligned_cols=79  Identities=19%  Similarity=0.090  Sum_probs=59.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc-hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN-FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      ++|+++||||+++||++++++|.++|+.|.+..|+...- ...+.++.....+..+++|++|+++++++++.       +
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999975320 01112222225677889999999998877653       6


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |+.+...
T Consensus        86 DiLVNNA   92 (254)
T 4fn4_A           86 DVLCNNA   92 (254)
T ss_dssp             CEEEECC
T ss_pred             CEEEECC
Confidence            7766544

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=98.63  E-value=5.7e-08  Score=80.86  Aligned_cols=79  Identities=19%  Similarity=0.084  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE-cCCCCch-hhhhhh-hhcCCcEEEEEcCCCHH---------------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI-RDSASNF-NFSLLR-VFHSGVFDYWGLLEDEK---------------   65 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~-R~~~~~~-~~~~~~-~~~~~v~~~~~D~~d~~---------------   65 (231)
                      +++++||||+|+||++++++|+++|++|++++ |+..... ..+.+. .....+.++.+|++|.+               
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   88 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccch
Confidence            57899999999999999999999999999999 7642100 011111 11246788999999998               


Q ss_pred             --HHHHHHc-------cCCEEEEccc
Q 043777           66 --SLLEAVK-------QVDVRFIPSE   82 (231)
Q Consensus        66 --~l~~al~-------~~d~~f~ps~   82 (231)
                        ++.++++       .+|++++...
T Consensus        89 ~~~v~~~~~~~~~~~g~iD~lvnnAg  114 (291)
T 1e7w_A           89 FTRCAELVAACYTHWGRCDVLVNNAS  114 (291)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCC
Confidence              8887776       5798887554

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=98.61  E-value=6.4e-08  Score=82.02  Aligned_cols=80  Identities=19%  Similarity=0.075  Sum_probs=59.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE-cCCCCch-hhhhhh-hhcCCcEEEEEcCCCHH---------------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI-RDSASNF-NFSLLR-VFHSGVFDYWGLLEDEK---------------   65 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~-R~~~~~~-~~~~~~-~~~~~v~~~~~D~~d~~---------------   65 (231)
                      .++++||||+|+||++++++|+++|++|++++ |+..... ..+.+. .....+.++.+|++|.+               
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~  125 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL  125 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccccc
Confidence            57899999999999999999999999999999 7642100 011111 11246788999999998               


Q ss_pred             --HHHHHHc-------cCCEEEEcccC
Q 043777           66 --SLLEAVK-------QVDVRFIPSEY   83 (231)
Q Consensus        66 --~l~~al~-------~~d~~f~ps~~   83 (231)
                        ++.++++       .+|++++....
T Consensus       126 ~~~v~~~~~~~~~~~g~iD~lVnnAG~  152 (328)
T 2qhx_A          126 FTRCAELVAACYTHWGRCDVLVNNASS  152 (328)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence              8887776       58988875543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.59  E-value=1.3e-07  Score=76.73  Aligned_cols=75  Identities=21%  Similarity=0.151  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~   79 (231)
                      +.|+++||||+++||++++++|.++|++|.+.+|+...     ........+..+.+|++|+++++++++.   +|+.+.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~-----~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN   84 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG-----VHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVN   84 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTS-----TTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            36899999999999999999999999999999997632     1111126778899999999999888864   687665


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      ...
T Consensus        85 NAG   87 (242)
T 4b79_A           85 NAG   87 (242)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=98.58  E-value=5.4e-08  Score=76.35  Aligned_cols=73  Identities=21%  Similarity=0.135  Sum_probs=56.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---cCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---QVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---~~d~~f~ps   81 (231)
                      |+++||||+|+||++++++|+++  +|++++|+...  ..+..+.+ .. .++.+|++|++++.++++   ++|++++..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~--~~~~~~~~-~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGA--LAELAREV-GA-RALPADLADELEAKALLEEAGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHH--HHHHHHHH-TC-EECCCCTTSHHHHHHHHHHHCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHH--HHHHHHhc-cC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECC
Confidence            57999999999999999999998  89999886421  11111111 22 788899999999999998   799988865


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus        75 g~   76 (207)
T 2yut_A           75 GK   76 (207)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=98.58  E-value=1e-07  Score=77.69  Aligned_cols=77  Identities=17%  Similarity=0.202  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +++++||||+|+||++++++|+++|  +.|.+..|+...  ..+..+.+...+.++.+|++|.+++.++++       .+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAP--LKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHH--HHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHH--HHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            3789999999999999999999985  677777776421  111222233567889999999999888776       57


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        80 d~lvnnAg   87 (254)
T 3kzv_A           80 DSLVANAG   87 (254)
T ss_dssp             CEEEEECC
T ss_pred             cEEEECCc
Confidence            88877544

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.57  E-value=3.3e-08  Score=80.99  Aligned_cols=76  Identities=13%  Similarity=0.081  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      +|+++||||+++||++++++|.++|++|.+.+|+...  ..+..+.+   ...+..+++|++|+++++++++.       
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~--~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL--LAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH--HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            6899999999999999999999999999999987432  11122222   24577789999999998877654       


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|+.+...
T Consensus        87 iDiLVNNA   94 (255)
T 4g81_D           87 VDILINNA   94 (255)
T ss_dssp             CCEEEECC
T ss_pred             CcEEEECC
Confidence            57766543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=98.57  E-value=8.6e-08  Score=79.75  Aligned_cols=79  Identities=14%  Similarity=0.036  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC---CEEEEEcCCCCch-hhhhhhhh-c-CCcEEEEEcCCCHHHHHHHHcc----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH---PKFALIRDSASNF-NFSLLRVF-H-SGVFDYWGLLEDEKSLLEAVKQ----   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~---~v~~~~R~~~~~~-~~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~~----   73 (231)
                      +++++||||+|+||++++++|+++|+   .|.+..|+..... ..+.+... . ..+.++.+|++|.+++.++++.    
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  112 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQE  112 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999987   8888888753200 11111111 1 4567889999999999998874    


Q ss_pred             ---CCEEEEccc
Q 043777           74 ---VDVRFIPSE   82 (231)
Q Consensus        74 ---~d~~f~ps~   82 (231)
                         +|+++..+.
T Consensus       113 ~g~iD~lVnnAG  124 (287)
T 3rku_A          113 FKDIDILVNNAG  124 (287)
T ss_dssp             GCSCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence               688777554

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.57  E-value=3.2e-07  Score=67.83  Aligned_cols=70  Identities=17%  Similarity=0.213  Sum_probs=56.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      +++|+|+|+ |.+|+.+++.|.++|++|+++.|+..      ..+.+. .++.++.+|.++++.+.++ ++++|.+++.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~------~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKE------KIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHH------HHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHH------HHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence            468999998 99999999999999999999998642      112222 6788999999999999876 4568887754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=98.56  E-value=8.2e-08  Score=78.57  Aligned_cols=80  Identities=19%  Similarity=0.123  Sum_probs=60.8

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcCCCCc-h--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRDSASN-F--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~~~~~-~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      +++++||||+  |+||++++++|+++|+.|.++.|+.... .  ..+........+.++.+|++|.+++.++++.     
T Consensus        20 ~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (267)
T 3gdg_A           20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF   99 (267)
T ss_dssp             TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            5789999999  8999999999999999999998876431 1  1111112235678889999999998887764     


Q ss_pred             --CCEEEEcccC
Q 043777           74 --VDVRFIPSEY   83 (231)
Q Consensus        74 --~d~~f~ps~~   83 (231)
                        +|++++....
T Consensus       100 g~id~li~nAg~  111 (267)
T 3gdg_A          100 GQIDAFIANAGA  111 (267)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence              6888875543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.55  E-value=5.8e-08  Score=78.88  Aligned_cols=67  Identities=12%  Similarity=0.097  Sum_probs=54.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccC----CEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQV----DVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~----d~~f~p   80 (231)
                      |+++||||+|+||++++++|+++|++|++++|+...         ....   +.+|++|.+++.++++.+    |++++.
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---------~~~~---~~~Dl~~~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------VIAD---LSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------EECC---TTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh---------hccc---cccCCCCHHHHHHHHHHhCCCCCEEEEC
Confidence            589999999999999999999999999999997531         0011   568999999999998754    888876


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        70 Ag~   72 (257)
T 1fjh_A           70 AGL   72 (257)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.54  E-value=3.1e-07  Score=82.07  Aligned_cols=80  Identities=23%  Similarity=0.171  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      +++++||||+|+||+++++.|.++|+ .|+++.|+....+ ..+....+.   ..+.++.+|++|.+++.++++.     
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            37899999999999999999999998 6777777642211 122222332   4577889999999999999875     


Q ss_pred             -CCEEEEcccC
Q 043777           74 -VDVRFIPSEY   83 (231)
Q Consensus        74 -~d~~f~ps~~   83 (231)
                       +|.+++....
T Consensus       319 ~ld~vVh~AGv  329 (496)
T 3mje_A          319 PLTAVFHSAGV  329 (496)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCeEEEECCcc
Confidence             4667765443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=98.53  E-value=7.6e-08  Score=78.52  Aligned_cols=77  Identities=12%  Similarity=0.032  Sum_probs=57.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh---CCCCEEEEEcCCCCchhhhhhhhh-----cCCcEEEEEcCCCHHHHHHHHcc--
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE---YGHPKFALIRDSASNFNFSLLRVF-----HSGVFDYWGLLEDEKSLLEAVKQ--   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~---~g~~v~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~D~~d~~~l~~al~~--   73 (231)
                      +++++||||+|+||++++++|++   +|++|++++|+...  ..+..+.+     ...+.++.+|++|++++.++++.  
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM--LRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH--HHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHH--HHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999   89999999997421  11111122     13467889999999988776643  


Q ss_pred             -------CC--EEEEccc
Q 043777           74 -------VD--VRFIPSE   82 (231)
Q Consensus        74 -------~d--~~f~ps~   82 (231)
                             +|  ++++...
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence                   47  7666544

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.51  E-value=8e-07  Score=66.70  Aligned_cols=76  Identities=12%  Similarity=0.062  Sum_probs=59.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhh-hhcCCcEEEEEcCCCHHHHHHH-HccCCEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLR-VFHSGVFDYWGLLEDEKSLLEA-VKQVDVRF   78 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~-~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f   78 (231)
                      |. +++|+|+|+ |.+|+.+++.|.+.|++|+++.|+...  +.+.+. .+..++.++.+|.++++.+.++ ++++|.++
T Consensus         1 ~~-~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~--~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            1 HR-KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPED--DIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CC-CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH--HHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CC-CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChH--HHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence            55 578999997 999999999999999999999986311  111122 2236789999999999999887 88999887


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      +.
T Consensus        77 ~~   78 (153)
T 1id1_A           77 AL   78 (153)
T ss_dssp             EC
T ss_pred             Ee
Confidence            65

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.49  E-value=6.7e-07  Score=72.59  Aligned_cols=72  Identities=25%  Similarity=0.224  Sum_probs=53.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCC-CHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLE-DEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~-d~~~l~~al~~~d~~f~ps~   82 (231)
                      +++++||||+|+||++++++|+++|++|++++|+..      ..+.+ ..+.++ +|+. +.+.+.+.+.++|++++...
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------~~~~~-~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag   90 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE------LLKRS-GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAG   90 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH------HHHHT-CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH------HHHhh-CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCC
Confidence            678999999999999999999999999999999741      11222 345566 9982 33444444457899888654


Q ss_pred             C
Q 043777           83 Y   83 (231)
Q Consensus        83 ~   83 (231)
                      .
T Consensus        91 ~   91 (249)
T 1o5i_A           91 G   91 (249)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.49  E-value=2.4e-07  Score=77.02  Aligned_cols=79  Identities=18%  Similarity=0.092  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .++++||||+|++|++++..|++.|+.|+++.|+...  ..+..+.+.  .++.++.+|++|.+++.++++++|+++...
T Consensus       119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~--~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDK--AQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHH--HHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            5789999999999999999999999999999987421  111222221  256778899999999999999999988876


Q ss_pred             cCC
Q 043777           82 EYG   84 (231)
Q Consensus        82 ~~g   84 (231)
                      ..+
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            544

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.46  E-value=3.5e-07  Score=75.12  Aligned_cols=70  Identities=19%  Similarity=0.084  Sum_probs=55.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +++++||||+|+||++++++|+++|++|++++|+...         . .....+.+|++|.+++.++++       .+|+
T Consensus        28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~---------~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAG---------I-AADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTT---------S-CCSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---------H-HhhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5789999999999999999999999999999887531         1 112345789999998877665       5898


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        98 lvnnAg~  104 (266)
T 3uxy_A           98 VVNNAGV  104 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            8875543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=98.44  E-value=4.1e-07  Score=74.69  Aligned_cols=69  Identities=13%  Similarity=0.027  Sum_probs=54.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      .|+++||||+++||++++++|.++|++|.+..|+...        .. .....+++|++|++++.++++.       +|+
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--------~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A           11 GKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE--------GL-PEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             TCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT--------TS-CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             CCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh--------CC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999997531        11 2234688999999988776653       687


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      .+...
T Consensus        82 lVnnA   86 (261)
T 4h15_A           82 IVHML   86 (261)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            76543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.44  E-value=2e-07  Score=75.92  Aligned_cols=77  Identities=12%  Similarity=0.065  Sum_probs=59.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps   81 (231)
                      +|+++||||+++||+.+++.|.++|++|.+.+|+... ...+.+......+..+.+|++|++++.++++.  +|+.+...
T Consensus         9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~-~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A            9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-ETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH-HHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH-HHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            5899999999999999999999999999999997531 11222223235678899999999988877764  68766543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.39  E-value=1.5e-06  Score=63.85  Aligned_cols=70  Identities=17%  Similarity=0.295  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      +++|+|+|+ |.+|+.+++.|.+.|++|+++.|+..      ..+.+. .+...+.+|.++.+.+.++ ++++|++++.
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~------~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   77 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEE------KVNAYASYATHAVIANATEENELLSLGIRNFEYVIVA   77 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHH------HHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence            457999998 99999999999999999999988642      112222 4567788999998888876 7889998865

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=98.38  E-value=9.1e-07  Score=79.64  Aligned_cols=79  Identities=15%  Similarity=0.050  Sum_probs=57.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEE-EE-EcCCCC----------ch-hhhhhhhh---cCCcEEEEEcCCCHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKF-AL-IRDSAS----------NF-NFSLLRVF---HSGVFDYWGLLEDEKSL   67 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~-~~-~R~~~~----------~~-~~~~~~~~---~~~v~~~~~D~~d~~~l   67 (231)
                      .++++||||+|+||.++++.|.++|+.++ ++ .|+...          .+ ..+....+   ...+.++.+|++|.+++
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v  330 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAA  330 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHH
Confidence            57899999999999999999999999844 44 676321          01 11222223   24577889999999999


Q ss_pred             HHHHccC------CEEEEccc
Q 043777           68 LEAVKQV------DVRFIPSE   82 (231)
Q Consensus        68 ~~al~~~------d~~f~ps~   82 (231)
                      .++++.+      |.+++...
T Consensus       331 ~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          331 ARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             HHHHHTSCTTSCEEEEEECCC
T ss_pred             HHHHHHHHhcCCCcEEEECCc
Confidence            9999864      66776544

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.34  E-value=3.7e-07  Score=72.76  Aligned_cols=60  Identities=18%  Similarity=0.205  Sum_probs=51.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---cCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---QVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---~~d~~f~p   80 (231)
                      +++++||||+|+||++++++|+++|+.|.++.|+.             .      +|++|++++.++++   .+|++++.
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~-------------~------~D~~~~~~v~~~~~~~g~id~lv~n   66 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT-------------G------LDISDEKSVYHYFETIGAFDHLIVT   66 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG-------------T------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc-------------c------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence            57899999999999999999999999999988863             1      79999999988886   47887775


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      ..
T Consensus        67 Ag   68 (223)
T 3uce_A           67 AG   68 (223)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=98.31  E-value=1.2e-06  Score=77.41  Aligned_cols=78  Identities=15%  Similarity=0.028  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------c-CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------Q-VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~-~d   75 (231)
                      .++++||||+|+||+++++.|.++|++|+++.|+.......+....  .++.++.+|++|.+++.++++       + +|
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~--~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADK--VGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH--HTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH--cCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            5789999999999999999999999999999886421111111111  456789999999999887775       3 88


Q ss_pred             EEEEcccC
Q 043777           76 VRFIPSEY   83 (231)
Q Consensus        76 ~~f~ps~~   83 (231)
                      .+++....
T Consensus       291 ~lV~nAGv  298 (454)
T 3u0b_A          291 ILVNNAGI  298 (454)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            88876543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.31  E-value=3.1e-06  Score=61.86  Aligned_cols=70  Identities=20%  Similarity=0.274  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      .|+|+|+|+ |.+|+.+++.|.+.|++|+++.|+..   ..   +.+.  .++.++.+|..+.+.+.++ ++++|++++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~---~~---~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   76 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKD---IC---KKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV   76 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HH---HHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH---HH---HHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence            579999997 99999999999999999999988642   11   1222  3677888999999888765 6789998875

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.27  E-value=2.4e-06  Score=75.50  Aligned_cols=77  Identities=17%  Similarity=0.036  Sum_probs=58.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |. +++|+|+| +|++|++++++|++.|++|++++|+..   +.+.+.....++..+.+|++|.+++.++++++|++++.
T Consensus         1 M~-~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~---~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~   75 (450)
T 1ff9_A            1 MA-TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLE---SAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL   75 (450)
T ss_dssp             -C-CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHH---HHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred             CC-CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHH---HHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence            65 57899998 799999999999999999999998642   12111111134677889999999999999999998875


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      ..
T Consensus        76 a~   77 (450)
T 1ff9_A           76 IP   77 (450)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.20  E-value=5.2e-06  Score=65.91  Aligned_cols=69  Identities=20%  Similarity=0.187  Sum_probs=56.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++.++..   +.   +.+.  .++.++.+|.++.+.+.++ ++++|.+++.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~---~~---~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   72 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRE---LC---EEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVIL   72 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHH---HH---HHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHH---HH---HHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence            57999997 99999999999999999999998742   11   2221  4788999999999999887 7889987764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.20  E-value=8.8e-07  Score=71.54  Aligned_cols=75  Identities=23%  Similarity=0.245  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH---HHHHc---cCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL---LEAVK---QVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l---~~al~---~~d~~   77 (231)
                      +++++||||+|+||++++++|.+ |+.|+++.|+...   .+.+.. ..++.++.+|+++....   .+.++   .+|++
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~---~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   79 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEH---LAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL   79 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHH---HHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHH---HHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEE
Confidence            67899999999999999999987 8899999986421   111111 15688899999887542   22222   47887


Q ss_pred             EEcccC
Q 043777           78 FIPSEY   83 (231)
Q Consensus        78 f~ps~~   83 (231)
                      ++....
T Consensus        80 v~~Ag~   85 (245)
T 3e9n_A           80 VHAAAV   85 (245)
T ss_dssp             EECC--
T ss_pred             EECCCc
Confidence            775443

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.20  E-value=1e-05  Score=59.70  Aligned_cols=70  Identities=16%  Similarity=0.241  Sum_probs=57.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      +++|+|+|+ |.+|+.+++.|.+.|++|+++.++..      ..+.+. .++.++.+|.++++.+.++ +.++|.+++.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~------~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRT------RVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHH------HHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHH------HHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence            468999998 99999999999999999999998742      122233 6888999999999998875 6778887754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.18  E-value=3.7e-06  Score=70.92  Aligned_cols=78  Identities=19%  Similarity=0.090  Sum_probs=53.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC-------Cchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc---
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA-------SNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK---   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~-------~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~---   72 (231)
                      +++++||||+|+||++++++|+++|++|++.+|...       .....+....+. .+.. ..+|++|.+++.++++   
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-AVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999998765321       001111122222 2222 3589999987666543   


Q ss_pred             ----cCCEEEEccc
Q 043777           73 ----QVDVRFIPSE   82 (231)
Q Consensus        73 ----~~d~~f~ps~   82 (231)
                          .+|++++...
T Consensus        88 ~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHTSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence                4788887554

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=98.18  E-value=1.7e-06  Score=70.28  Aligned_cols=77  Identities=18%  Similarity=0.062  Sum_probs=49.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH----HccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA----VKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a----l~~~d~~f~p   80 (231)
                      ++++||||+|+||++++++|+++|++|++++|+.........+......+..+  |..+.+.+.+.    +..+|++++.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999999999999753211000011112233333  55554443322    2368998875


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      ...
T Consensus        80 Ag~   82 (254)
T 1zmt_A           80 DIF   82 (254)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            543

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.10  E-value=1.1e-05  Score=69.30  Aligned_cols=68  Identities=16%  Similarity=0.120  Sum_probs=54.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|||+|.|| |++|+.+++.|.+ .++|.+.+|+..      .++.....+..+..|+.|.+++.++++++|++..
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~------~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~   83 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNE------NLEKVKEFATPLKVDASNFDKLVEVMKEFELVIG   83 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHH------HHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHH------HHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEE
Confidence            689999998 9999999988754 588998888642      1223335677889999999999999999998664

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.09  E-value=8.2e-06  Score=71.09  Aligned_cols=69  Identities=13%  Similarity=0.070  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh-CCCCEEEEEcCCCCchh-------------hhhhhhhcCCcEEEEEcCCCHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE-YGHPKFALIRDSASNFN-------------FSLLRVFHSGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~-~g~~v~~~~R~~~~~~~-------------~~~~~~~~~~v~~~~~D~~d~~~l~~   69 (231)
                      +|++|||||+++||+++++.|.+ +|+.|.++.|+......             .+.++.....+..+.+|++|++++.+
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~  140 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ  140 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            57899999999999999999999 99999999987543110             01122222456778999999998776


Q ss_pred             HHc
Q 043777           70 AVK   72 (231)
Q Consensus        70 al~   72 (231)
                      +++
T Consensus       141 ~v~  143 (422)
T 3s8m_A          141 VIE  143 (422)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.09  E-value=1.6e-05  Score=59.64  Aligned_cols=72  Identities=19%  Similarity=0.319  Sum_probs=55.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      .++|+|+|+ |.+|+.+++.|.+.|++|+++.|+...   .+.+.. ..++.++.+|..+.+.+.++ ++++|+++..
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~---~~~~~~-~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYA---FHRLNS-EFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG---GGGSCT-TCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH---HHHHHh-cCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            578999997 999999999999999999999987531   111110 14667788999998888776 7889988865

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.05  E-value=1.2e-05  Score=61.96  Aligned_cols=70  Identities=17%  Similarity=0.171  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH--HccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA--VKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a--l~~~d~~f~   79 (231)
                      +++|+|+|+ |.+|+.+++.|.+. |++|+++.|+..   +.   +.+. .++.++.+|.++.+.+.++  ++++|.+++
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~---~~---~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREE---AA---QQHRSEGRNVISGDATDPDFWERILDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHH---HH---HHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHH---HH---HHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence            468999996 99999999999999 999999998742   11   2222 5778889999999988887  788998876


Q ss_pred             c
Q 043777           80 P   80 (231)
Q Consensus        80 p   80 (231)
                      .
T Consensus       112 ~  112 (183)
T 3c85_A          112 A  112 (183)
T ss_dssp             C
T ss_pred             e
Confidence            4

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.04  E-value=1.3e-05  Score=69.30  Aligned_cols=76  Identities=14%  Similarity=0.034  Sum_probs=55.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh-CCCCEEEEEcCCCCch-h------------hhhhhhhcCCcEEEEEcCCCHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE-YGHPKFALIRDSASNF-N------------FSLLRVFHSGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~-~g~~v~~~~R~~~~~~-~------------~~~~~~~~~~v~~~~~D~~d~~~l~~   69 (231)
                      .++++||||+++||+++++.|.+ +|+.|.++.|+..... .            .+.+......+..+.+|++|++++.+
T Consensus        47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~  126 (405)
T 3zu3_A           47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL  126 (405)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            57899999999999999999999 9999999988653211 0            11112222456778999999998877


Q ss_pred             HHcc-------CCEEEE
Q 043777           70 AVKQ-------VDVRFI   79 (231)
Q Consensus        70 al~~-------~d~~f~   79 (231)
                      +++.       +|+.+.
T Consensus       127 ~v~~i~~~~G~IDiLVN  143 (405)
T 3zu3_A          127 TIDAIKQDLGQVDQVIY  143 (405)
T ss_dssp             HHHHHHHHTSCEEEEEE
T ss_pred             HHHHHHHHcCCCCEEEE
Confidence            7653       566554

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.02  E-value=1.4e-05  Score=69.89  Aligned_cols=77  Identities=9%  Similarity=0.022  Sum_probs=56.1

Q ss_pred             CCeEEEEcCCChhHHH--HHHHHHhCCCCEEEEEcCCCCch-h--------hhh----hhhhcCCcEEEEEcCCCHHHHH
Q 043777            4 KSNVLVIGAIGRIGYH--FTRRSIEYGHPKFALIRDSASNF-N--------FSL----LRVFHSGVFDYWGLLEDEKSLL   68 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~--i~~~L~~~g~~v~~~~R~~~~~~-~--------~~~----~~~~~~~v~~~~~D~~d~~~l~   68 (231)
                      +++++||||+++||++  ++.+|.++|+.|.++.|+..... +        .+.    .......+..+.+|++|.+++.
T Consensus        60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~  139 (418)
T 4eue_A           60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD  139 (418)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence            5789999999999999  99999999999999998653210 0        011    1122245778899999999887


Q ss_pred             HHHcc-------CCEEEEc
Q 043777           69 EAVKQ-------VDVRFIP   80 (231)
Q Consensus        69 ~al~~-------~d~~f~p   80 (231)
                      ++++.       +|+.+..
T Consensus       140 ~~v~~i~~~~G~IDiLVnN  158 (418)
T 4eue_A          140 KVIKYIKDEFGKIDLFVYS  158 (418)
T ss_dssp             HHHHHHHHTTCCEEEEEEC
T ss_pred             HHHHHHHHHcCCCCEEEEC
Confidence            76653       5665543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.02  E-value=1.3e-05  Score=75.59  Aligned_cols=72  Identities=19%  Similarity=0.236  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHH-hCCCC-EEEEEcCCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSI-EYGHP-KFALIRDSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~-~~g~~-v~~~~R~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      +.++++||||+|+||+.+++.|. ++|.. |++++|+..... ..+..+++.   ..+.++.+|++|.+++.++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            46789999999999999999999 78985 888888743211 122333333   44677899999999999999864

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.96  E-value=1.7e-05  Score=68.98  Aligned_cols=73  Identities=12%  Similarity=0.053  Sum_probs=56.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC---CEEEEEcCCCCchhhhhhhhhc----CCcEEEEEcCCCHHHHHHHHcc--CC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH---PKFALIRDSASNFNFSLLRVFH----SGVFDYWGLLEDEKSLLEAVKQ--VD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~---~v~~~~R~~~~~~~~~~~~~~~----~~v~~~~~D~~d~~~l~~al~~--~d   75 (231)
                      ++|+|+|| |++|+.+++.|.+.|.   .|.+.+|+...  ..+..+.+.    .++..+.+|++|.+++.+++++  +|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~--~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSK--CQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHH--HHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHH--HHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            58999999 9999999999999983   78888887532  111222222    2578899999999999999998  89


Q ss_pred             EEEEc
Q 043777           76 VRFIP   80 (231)
Q Consensus        76 ~~f~p   80 (231)
                      +++..
T Consensus        79 vVin~   83 (405)
T 4ina_A           79 IVLNI   83 (405)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            87764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.95  E-value=1.6e-05  Score=70.55  Aligned_cols=74  Identities=20%  Similarity=0.092  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      +++|+|+|| |++|+.++..|++. |++|++++|+..   +++.+... .++..+.+|+.|.+++.++++++|+++....
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~---ka~~la~~-~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp   97 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLA---NAQALAKP-SGSKAISLDVTDDSALDKVLADNDVVISLIP   97 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHH---HHHHHHGG-GTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHH---HHHHHHHh-cCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence            568999998 99999999999998 688999999742   12211111 3567788999999999999999999887443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.90  E-value=8.6e-06  Score=68.97  Aligned_cols=80  Identities=19%  Similarity=0.120  Sum_probs=51.9

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcC----CCCchhhhhhhhhcCC-cEEEEEcCCCHHHH
Q 043777            1 MAG-KSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRD----SASNFNFSLLRVFHSG-VFDYWGLLEDEKSL   67 (231)
Q Consensus         1 M~~-~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~----~~~~~~~~~~~~~~~~-v~~~~~D~~d~~~l   67 (231)
                      |.+ +|||+||||+|++|++++..|+..|+       ++++++++    ... . ......+... ..+ ..|+....++
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~-~-~g~~~dl~~~~~~~-~~~i~~~~~~   77 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKA-L-QGVMMEIDDCAFPL-LAGMTAHADP   77 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHH-H-HHHHHHHHTTTCTT-EEEEEEESSH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCcccccc-c-hhhHHHHhhhcccc-cCcEEEecCc
Confidence            543 57999999999999999999999885       67777665    210 0 0001112111 111 2466656678


Q ss_pred             HHHHccCCEEEEcccC
Q 043777           68 LEAVKQVDVRFIPSEY   83 (231)
Q Consensus        68 ~~al~~~d~~f~ps~~   83 (231)
                      .++++++|++++....
T Consensus        78 ~~al~~aD~Vi~~ag~   93 (329)
T 1b8p_A           78 MTAFKDADVALLVGAR   93 (329)
T ss_dssp             HHHTTTCSEEEECCCC
T ss_pred             HHHhCCCCEEEEeCCC
Confidence            8999999999986543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.90  E-value=1.8e-05  Score=63.34  Aligned_cols=69  Identities=14%  Similarity=0.053  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |+++.|+..   ..+.+   ..++.++.+|.+|++.+.++ ++++|.+++.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~---~~~~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENV---RKKVL---RSGANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGG---HHHHH---HTTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHH---HHHHH---hcCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            478999998 9999999999999999 998887642   11111   15688999999999999887 8889988764

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.86  E-value=6.8e-05  Score=63.34  Aligned_cols=76  Identities=17%  Similarity=0.144  Sum_probs=51.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      +|||+|+||+|++|+.++..|+.+|  ++|++++++.. ......+........ +.+ +.+..++.++++++|++++..
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~-v~~-~~~t~d~~~al~gaDvVi~~a   84 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAV-VRG-FLGQQQLEAALTGMDLIIVPA   84 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCE-EEE-EESHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccce-EEE-EeCCCCHHHHcCCCCEEEEcC
Confidence            5799999999999999999999988  78888887642 111111111111112 222 345677889999999999864


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        85 g   85 (326)
T 1smk_A           85 G   85 (326)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.85  E-value=7e-05  Score=60.09  Aligned_cols=72  Identities=18%  Similarity=0.161  Sum_probs=51.2

Q ss_pred             CCCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHH
Q 043777            3 GKSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKS   66 (231)
Q Consensus         3 ~~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~   66 (231)
                      .+|+|+||||                ||.+|.+++++|+++|++|+++.|+.+..+      ..+.++.+  .|+...++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~------~~~~~~~~--~~v~s~~e   73 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP------EPHPNLSI--REITNTKD   73 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC------CCCTTEEE--EECCSHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cCCCCeEE--EEHhHHHH
Confidence            4689999999                999999999999999999999999753211      00134443  46666655


Q ss_pred             HHH----HHccCCEEEEccc
Q 043777           67 LLE----AVKQVDVRFIPSE   82 (231)
Q Consensus        67 l~~----al~~~d~~f~ps~   82 (231)
                      +.+    .+.++|+.+..+.
T Consensus        74 m~~~v~~~~~~~Dili~aAA   93 (232)
T 2gk4_A           74 LLIEMQERVQDYQVLIHSMA   93 (232)
T ss_dssp             HHHHHHHHGGGCSEEEECSB
T ss_pred             HHHHHHHhcCCCCEEEEcCc
Confidence            444    4456898887543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=97.80  E-value=6.9e-05  Score=75.48  Aligned_cols=80  Identities=11%  Similarity=-0.008  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCCh-hHHHHHHHHHhCCCCEEEEEcCCCCch---hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc----
Q 043777            4 KSNVLVIGAIGR-IGYHFTRRSIEYGHPKFALIRDSASNF---NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK----   72 (231)
Q Consensus         4 ~~~ilVtGatG~-iG~~i~~~L~~~g~~v~~~~R~~~~~~---~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~----   72 (231)
                      +++++||||+|+ ||+++++.|+++|+.|++++|+.....   ..++...+.   ..+.++.+|++|.+++.++++    
T Consensus       652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~  731 (1878)
T 2uv9_A          652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYD  731 (1878)
T ss_dssp             TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            578999999999 999999999999999988865432111   111112222   346778999999999887764    


Q ss_pred             -------cCCEEEEcccC
Q 043777           73 -------QVDVRFIPSEY   83 (231)
Q Consensus        73 -------~~d~~f~ps~~   83 (231)
                             .+|++++....
T Consensus       732 ~~~~~G~~IDiLVnNAGi  749 (1878)
T 2uv9_A          732 TKNGLGWDLDYVVPFAAI  749 (1878)
T ss_dssp             SSSSCCCCCSEEEECCCC
T ss_pred             hhcccCCCCcEEEeCccc
Confidence                   36887775543

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.79  E-value=1.9e-05  Score=72.35  Aligned_cols=76  Identities=12%  Similarity=-0.005  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-------chhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc--
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-------NFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ--   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-------~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~--   73 (231)
                      +++++||||+|+||++++++|+++|+.|++++|....       ....+..+.+. .+.. ..+|++|.+++.++++.  
T Consensus        19 gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           19 GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHHHHH
Confidence            6789999999999999999999999999998872210       11111222232 2222 34899999988887764  


Q ss_pred             -----CCEEEEc
Q 043777           74 -----VDVRFIP   80 (231)
Q Consensus        74 -----~d~~f~p   80 (231)
                           +|++++.
T Consensus        98 ~~~g~iDiLVnn  109 (613)
T 3oml_A           98 KAFGRVDILVNN  109 (613)
T ss_dssp             -------CEECC
T ss_pred             HHCCCCcEEEEC
Confidence                 5665553

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.78  E-value=4.6e-05  Score=67.45  Aligned_cols=70  Identities=17%  Similarity=0.240  Sum_probs=56.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      +.|+|+|+|+ |.+|+++++.|.+.||+|+++.++..      .++.+.  .++.++.||-++++.|.+| ++++|....
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~------~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia   74 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGD------RLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA   74 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHH------HHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHH------HHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence            5799999998 99999999999999999999998642      122222  4788999999999999887 567887543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=97.74  E-value=9.2e-05  Score=74.70  Aligned_cols=80  Identities=13%  Similarity=0.049  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCCh-hHHHHHHHHHhCCCCEEEEEcCCCCch---hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc----
Q 043777            4 KSNVLVIGAIGR-IGYHFTRRSIEYGHPKFALIRDSASNF---NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK----   72 (231)
Q Consensus         4 ~~~ilVtGatG~-iG~~i~~~L~~~g~~v~~~~R~~~~~~---~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~----   72 (231)
                      +++++||||+|+ ||+++++.|+++|+.|++++++.....   ..+....+.   ..+.++.+|++|.+++.++++    
T Consensus       675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~  754 (1887)
T 2uv8_A          675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD  754 (1887)
T ss_dssp             TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            578999999998 999999999999999988854322111   011112222   346778999999999887764    


Q ss_pred             ---------cCCEEEEcccC
Q 043777           73 ---------QVDVRFIPSEY   83 (231)
Q Consensus        73 ---------~~d~~f~ps~~   83 (231)
                               .+|++++....
T Consensus       755 ~~~~~G~G~~LDiLVNNAGi  774 (1887)
T 2uv8_A          755 TEKNGGLGWDLDAIIPFAAI  774 (1887)
T ss_dssp             CTTTTSCCCCCSEEEECCCC
T ss_pred             hccccccCCCCeEEEECCCc
Confidence                     36787775543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.74  E-value=8.5e-05  Score=64.79  Aligned_cols=69  Identities=20%  Similarity=0.239  Sum_probs=57.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      +++|+|+|+ |.+|+.+++.|.+.|++|+++.++..      ..+.+. .++.++.+|.++++.|.++ +++++.+++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~------~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv   74 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPD------HIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLIN   74 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHH------HHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHH------HHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence            578999998 99999999999999999999998742      122333 6788999999999999888 778888665

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=97.72  E-value=3.9e-05  Score=75.55  Aligned_cols=79  Identities=15%  Similarity=0.048  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCCh-hHHHHHHHHHhCCCCEEEEE-cCCCCch--hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc----
Q 043777            4 KSNVLVIGAIGR-IGYHFTRRSIEYGHPKFALI-RDSASNF--NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK----   72 (231)
Q Consensus         4 ~~~ilVtGatG~-iG~~i~~~L~~~g~~v~~~~-R~~~~~~--~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~----   72 (231)
                      +++++||||+|+ ||+++++.|+++|+.|++++ |+.....  ..+....+.   ..+.++.+|++|.+++.++++    
T Consensus       476 GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e  555 (1688)
T 2pff_A          476 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD  555 (1688)
T ss_dssp             SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHS
T ss_pred             CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            468999999998 99999999999999998884 4432211  111111221   246778999999998887764    


Q ss_pred             ---------cCCEEEEccc
Q 043777           73 ---------QVDVRFIPSE   82 (231)
Q Consensus        73 ---------~~d~~f~ps~   82 (231)
                               .+|++++.+.
T Consensus       556 ~~~~~GfG~~IDILVNNAG  574 (1688)
T 2pff_A          556 TEKNGGLGWDLDAIIPFAA  574 (1688)
T ss_dssp             CTTSSSCCCCCCEEECCCC
T ss_pred             hccccccCCCCeEEEECCC
Confidence                     3677776543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.65  E-value=2.1e-05  Score=63.33  Aligned_cols=73  Identities=15%  Similarity=0.057  Sum_probs=46.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEE-E--cCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHH-c---cCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFAL-I--RDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAV-K---QVDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~-~--R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al-~---~~d~~   77 (231)
                      |+++||||+|+||++++++|+++|++|+++ .  |+...  ..+..+.+ .+..+.  |..+.+.+.+.+ +   .+|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~--~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAE--RQRFESEN-PGTIAL--AEQKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH--HHHHHHHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHH--HHHHHHHh-CCCccc--CHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999998 5  86421  11111222 233332  444444433322 2   46887


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      ++...
T Consensus        77 v~~Ag   81 (244)
T 1zmo_A           77 VSNDY   81 (244)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            77554

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.61  E-value=0.00031  Score=56.16  Aligned_cols=69  Identities=12%  Similarity=0.066  Sum_probs=51.1

Q ss_pred             CCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH
Q 043777            4 KSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL   67 (231)
Q Consensus         4 ~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l   67 (231)
                      +++++||||                ||.+|.+++++|.++|++|+++.|+....        .+.++.  .+|+.+.+++
T Consensus         8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~--------~~~g~~--~~dv~~~~~~   77 (226)
T 1u7z_A            8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------TPPFVK--RVDVMTALEM   77 (226)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------CCTTEE--EEECCSHHHH
T ss_pred             CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc--------cCCCCe--EEccCcHHHH
Confidence            689999999                79999999999999999999988864210        112333  5688887766


Q ss_pred             HHHH----ccCCEEEEccc
Q 043777           68 LEAV----KQVDVRFIPSE   82 (231)
Q Consensus        68 ~~al----~~~d~~f~ps~   82 (231)
                      .+++    ..+|+.+..+.
T Consensus        78 ~~~v~~~~~~~Dili~~Aa   96 (226)
T 1u7z_A           78 EAAVNASVQQQNIFIGCAA   96 (226)
T ss_dssp             HHHHHHHGGGCSEEEECCB
T ss_pred             HHHHHHhcCCCCEEEECCc
Confidence            5544    45888776543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.53  E-value=0.00031  Score=60.42  Aligned_cols=80  Identities=14%  Similarity=0.071  Sum_probs=56.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH-hCCCCEEEEEcCCCCchh-------------hhhhhhhcCCcEEEEEcCCCHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSI-EYGHPKFALIRDSASNFN-------------FSLLRVFHSGVFDYWGLLEDEKSLLE   69 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~-~~g~~v~~~~R~~~~~~~-------------~~~~~~~~~~v~~~~~D~~d~~~l~~   69 (231)
                      +|++|||||+.++|.+...+|. +.|..+.++.|......+             .+..+.....+..+.+|++|.+.+.+
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~  129 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ  129 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence            5899999999999999998887 678899888886533110             11122222566788999999998877


Q ss_pred             HHcc-------CCEEEEcccC
Q 043777           70 AVKQ-------VDVRFIPSEY   83 (231)
Q Consensus        70 al~~-------~d~~f~ps~~   83 (231)
                      +++.       +|++.+...+
T Consensus       130 vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          130 VIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEEeccc
Confidence            7654       5666654443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.53  E-value=0.00071  Score=56.78  Aligned_cols=80  Identities=13%  Similarity=0.051  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhh-hhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNF-SLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~-~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++++|+|+ |.+|+.++.+|.+.|. +|++..|+.....++ ++.+.+.  .++.+...++.+.+++.+.+.++|+++-
T Consensus       154 gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIIN  232 (315)
T 3tnl_A          154 GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTN  232 (315)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEE
Confidence            578999998 8999999999999998 799999984211112 1222222  3455666788888889999999999887


Q ss_pred             cccCC
Q 043777           80 PSEYG   84 (231)
Q Consensus        80 ps~~g   84 (231)
                      ....|
T Consensus       233 aTp~G  237 (315)
T 3tnl_A          233 ATGVG  237 (315)
T ss_dssp             CSSTT
T ss_pred             CccCC
Confidence            55544

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.51  E-value=0.0001  Score=62.09  Aligned_cols=34  Identities=9%  Similarity=0.043  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +++++||||++  +||++++++|+++|+.|++.+|+
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~   37 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence            57899999975  99999999999999999977765

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.48  E-value=0.00012  Score=61.91  Aligned_cols=68  Identities=13%  Similarity=0.020  Sum_probs=55.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      .++++|+|+ |.+|+.+++.|.++|+ |+++.+++.      ..+ +. .++.++.+|.+|++.+.++ ++++|.+++.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~------~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~  184 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENV------RKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVD  184 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGG------HHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChh------hhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence            358999997 9999999999999999 988877642      122 33 7889999999999999988 7888877754

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.44  E-value=0.00013  Score=60.43  Aligned_cols=34  Identities=9%  Similarity=0.112  Sum_probs=31.3

Q ss_pred             CCeEEEEcCC--ChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAI--GRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGat--G~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +++++||||+  |+||++++++|+++|++|++++|+
T Consensus         8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~   43 (297)
T 1d7o_A            8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence            5789999999  999999999999999999998864

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=97.44  E-value=0.0002  Score=75.47  Aligned_cols=70  Identities=13%  Similarity=0.045  Sum_probs=52.9

Q ss_pred             CCeEEEEcCCCh-hHHHHHHHHHhCCCCEEEEEcCCCCch---hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGR-IGYHFTRRSIEYGHPKFALIRDSASNF---NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~-iG~~i~~~L~~~g~~v~~~~R~~~~~~---~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      +|+++||||+++ ||+++++.|+++|+.|++.+|+.....   ..+..+.+.   ..+..+.+|++|.+++.++++.
T Consensus      2136 gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2136 DEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            678999999999 999999999999999999999764200   111222332   2356788999999998887653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=97.43  E-value=0.00025  Score=74.17  Aligned_cols=78  Identities=12%  Similarity=0.083  Sum_probs=56.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      .++++||||+|+||+.+++.|.++|+. |++++|+..... ..+..+.+.   ..+.++.+|++|.+++.++++.     
T Consensus      1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g 1963 (2512)
T 2vz8_A         1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLG 1963 (2512)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcC
Confidence            578999999999999999999999997 777788754321 112222332   3456678999999998877753     


Q ss_pred             -CCEEEEcc
Q 043777           74 -VDVRFIPS   81 (231)
Q Consensus        74 -~d~~f~ps   81 (231)
                       +|.+++.+
T Consensus      1964 ~id~lVnnA 1972 (2512)
T 2vz8_A         1964 PVGGVFNLA 1972 (2512)
T ss_dssp             CEEEEEECC
T ss_pred             CCcEEEECC
Confidence             56666543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.32  E-value=0.0003  Score=64.23  Aligned_cols=35  Identities=17%  Similarity=0.191  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++.++||||+++||++++++|.++|+.|++.+|+.
T Consensus         8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~   42 (604)
T 2et6_A            8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGG   42 (604)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc
Confidence            57899999999999999999999999999887754

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.31  E-value=0.00021  Score=59.76  Aligned_cols=34  Identities=12%  Similarity=0.085  Sum_probs=31.3

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +++++||||  +|+||++++++|+++|++|+++.|+
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            478999999  8999999999999999999998874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.31  E-value=0.00026  Score=64.68  Aligned_cols=78  Identities=13%  Similarity=0.185  Sum_probs=50.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcC-CCHHHHHH-HH---ccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLL-EDEKSLLE-AV---KQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~-~d~~~l~~-al---~~~d~~f   78 (231)
                      ++.++||||+++||+.++++|.++|+.|++.+|... ....+.+......+..+.+|+ .+.+.+.+ +.   ..+|+.+
T Consensus       322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~-~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA-TKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH-HHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            468999999999999999999999999998876431 111111112112344556777 55544332 22   3488877


Q ss_pred             Eccc
Q 043777           79 IPSE   82 (231)
Q Consensus        79 ~ps~   82 (231)
                      ....
T Consensus       401 nNAG  404 (604)
T 2et6_A          401 NNAG  404 (604)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            6544

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=97.29  E-value=0.00026  Score=59.22  Aligned_cols=34  Identities=12%  Similarity=0.100  Sum_probs=31.1

Q ss_pred             CCeEEEEcC--CChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGA--IGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGa--tG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +++++||||  +|+||++++++|+++|++|++++|+
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            468999999  8999999999999999999998864

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.21  E-value=0.0007  Score=56.75  Aligned_cols=74  Identities=22%  Similarity=0.143  Sum_probs=45.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCc-hh--hhhhhh---hc-CCcEEEEEcCCCHHHHHHHHccCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASN-FN--FSLLRV---FH-SGVFDYWGLLEDEKSLLEAVKQVD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~-~~--~~~~~~---~~-~~v~~~~~D~~d~~~l~~al~~~d   75 (231)
                      |||+||||+|++|++++..|+.+|.  ++.+++++.... ..  ...+..   +. ..+.+...+    +++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            5899999999999999999998885  355566521110 00  000111   11 122333221    23567899999


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++++...
T Consensus        77 ~Vi~~Ag   83 (313)
T 1hye_A           77 VVIITSG   83 (313)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9998654

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.13  E-value=0.0017  Score=51.20  Aligned_cols=62  Identities=19%  Similarity=0.187  Sum_probs=45.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +|+|+|+| +|.+|+.+++.|.+.|++|.+++|+..   +.   +.+. .++...        ++.++++++|++++.
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~---~~---~~~~~~g~~~~--------~~~~~~~~~DvVi~a   90 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPK---RT---ARLFPSAAQVT--------FQEEAVSSPEVIFVA   90 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHH---HH---HHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHH---HH---HHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence            46899999 699999999999999999999988642   11   2222 354432        355678889998874

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.12  E-value=0.0016  Score=55.84  Aligned_cols=72  Identities=17%  Similarity=0.233  Sum_probs=54.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .++|+|+|+ |.+|+.+++.|...|++|++++|+..   +.+.+... .+.. +.+|..+.+++.++++++|+++...
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~---~~~~~~~~-~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~  237 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHK---RLQYLDDV-FGGR-VITLTATEANIKKSVQHADLLIGAV  237 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHH-TTTS-EEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHH---HHHHHHHh-cCce-EEEecCCHHHHHHHHhCCCEEEECC
Confidence            578999999 99999999999999999999998642   11111111 1222 5578888899999999999988643

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.11  E-value=0.00082  Score=52.00  Aligned_cols=71  Identities=21%  Similarity=0.135  Sum_probs=46.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHH---HHHc--cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLL---EAVK--QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~---~al~--~~d~~f   78 (231)
                      .++|+|+||+|.+|..+++.+...|++|++++|+..   +.+....  .+... ..|+.+.+...   +...  ++|+++
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~---~~~~~~~--~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA---KREMLSR--LGVEY-VGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH---HHHHHHT--TCCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHH--cCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            578999999999999999999999999999888642   1222222  23322 24776654333   3332  367666


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      ..
T Consensus       113 ~~  114 (198)
T 1pqw_A          113 NS  114 (198)
T ss_dssp             EC
T ss_pred             EC
Confidence            43

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.11  E-value=0.0014  Score=54.94  Aligned_cols=75  Identities=19%  Similarity=0.050  Sum_probs=47.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      |||+|+||+|++|+.++..|+..|  .++.+++++.. ......+.+......+...  ....++.++++++|++|+...
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~-~~~a~dL~~~~~~~~l~~~--~~t~d~~~a~~~aDvVvi~ag   77 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT-PGVAADLSHIETRATVKGY--LGPEQLPDCLKGCDVVVIPAG   77 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH-HHHHHHHTTSSSSCEEEEE--ESGGGHHHHHTTCSEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc-HHHHHHHhccCcCceEEEe--cCCCCHHHHhCCCCEEEECCC
Confidence            589999999999999999999888  67888988751 1111111111111111110  012457788999999998543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.11  E-value=0.00052  Score=53.75  Aligned_cols=71  Identities=14%  Similarity=0.130  Sum_probs=45.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+|+|+||+|.+|+.+++.|.+.|++|+++.|+...  ..+..+.+...+.  ..|+. ..++.++++++|++++.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~D~Vi~~   71 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK--AEAKAAEYRRIAG--DASIT-GMKNEDAAEACDIAVLT   71 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH--HHHHHHHHHHHHS--SCCEE-EEEHHHHHHHCSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHHhccccc--cCCCC-hhhHHHHHhcCCEEEEe
Confidence            579999999999999999999999999999986421  0111111110000  01121 13456678889998875

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.06  E-value=0.0014  Score=56.73  Aligned_cols=71  Identities=15%  Similarity=0.112  Sum_probs=54.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      |+++++|+|+|+ |.+|+.+++++.+.|++|++++ ... .+..    .+......+.+|+.|.+.+.++++.+|++.
T Consensus        21 mm~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~-~p~~----~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~   91 (403)
T 3k5i_A           21 MWNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADN-SPAK----QISAHDGHVTGSFKEREAVRQLAKTCDVVT   91 (403)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STT-CTTG----GGCCSSCCEESCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCC-CcHH----HhccccceeecCCCCHHHHHHHHHhCCEEE
Confidence            545679999998 8999999999999999999998 532 1211    111222456789999999999999998854

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.01  E-value=0.0011  Score=54.78  Aligned_cols=37  Identities=19%  Similarity=0.231  Sum_probs=31.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+++|+|.|+|+ |.+|+.++..|.+.|++|.+++|+.
T Consensus         1 M~~~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~   37 (301)
T 3cky_A            1 MEKSIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLME   37 (301)
T ss_dssp             ---CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCCCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            777789999996 9999999999999999999888764

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.97  E-value=0.003  Score=54.17  Aligned_cols=67  Identities=18%  Similarity=0.144  Sum_probs=52.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      +++|+|+|+ |.+|+.+++++.+.|++|++++..... +..    .+  --..+..|+.|.+.+.++++.+|++.
T Consensus        12 ~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~-p~~----~~--ad~~~~~~~~d~~~l~~~~~~~dvi~   78 (377)
T 3orq_A           12 GATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDC-PCR----YV--AHEFIQAKYDDEKALNQLGQKCDVIT   78 (377)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTC-TTG----GG--SSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC-hhh----hh--CCEEEECCCCCHHHHHHHHHhCCcce
Confidence            578999997 999999999999999999999875431 111    11  11356789999999999999999864

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.97  E-value=0.00091  Score=56.56  Aligned_cols=37  Identities=24%  Similarity=0.235  Sum_probs=31.3

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+++|+|+|+|+ |.+|..++..|.+.|++|+++.|+.
T Consensus         1 mm~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~   37 (359)
T 1bg6_A            1 MIESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA   37 (359)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            555789999997 9999999999999999999998864

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.94  E-value=0.00066  Score=56.23  Aligned_cols=34  Identities=15%  Similarity=0.138  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+|+|+|+ |.+|+.++..|.+.|++|+++.|+.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~   36 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCH
Confidence            579999997 9999999999999999999998864

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.94  E-value=0.0051  Score=51.48  Aligned_cols=80  Identities=14%  Similarity=0.111  Sum_probs=55.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhh-hhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNF-SLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~-~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++++|+|+ |.+|+.++.+|.+.|. +|++..|+.....++ ++.+.+.  .+..+...++.+.+.+.+.+.++|+++-
T Consensus       148 gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIIN  226 (312)
T 3t4e_A          148 GKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTN  226 (312)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEE
Confidence            578999998 9999999999999997 799999974211112 1222232  3455556677776666778888998876


Q ss_pred             cccCC
Q 043777           80 PSEYG   84 (231)
Q Consensus        80 ps~~g   84 (231)
                      ....|
T Consensus       227 aTp~G  231 (312)
T 3t4e_A          227 GTKVG  231 (312)
T ss_dssp             CSSTT
T ss_pred             CCcCC
Confidence            54444

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=96.94  E-value=0.002  Score=54.88  Aligned_cols=34  Identities=26%  Similarity=0.164  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-----C-CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-----H-PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-----~-~v~~~~R~   37 (231)
                      +++|+|.||||.+|+.+++.|++.+     + +++.+.+.
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~   48 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAA   48 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECC
Confidence            4699999999999999999999877     3 56666643

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.87  E-value=0.003  Score=53.35  Aligned_cols=71  Identities=18%  Similarity=0.122  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-----cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-----QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-----~~d~~f   78 (231)
                      .++|+|+||+|.+|..+++.+...|++|+++.|+...   .+..+.+  +.. ...|+.+.+++.+.++     ++|+++
T Consensus       170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~---~~~~~~~--g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  243 (347)
T 2hcy_A          170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGK---EELFRSI--GGE-VFIDFTKEKDIVGAVLKATDGGAHGVI  243 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTH---HHHHHHT--TCC-EEEETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHH---HHHHHHc--CCc-eEEecCccHhHHHHHHHHhCCCCCEEE
Confidence            5789999999999999999999999999999986531   2222332  332 2347775444444333     366666


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      ..
T Consensus       244 ~~  245 (347)
T 2hcy_A          244 NV  245 (347)
T ss_dssp             EC
T ss_pred             EC
Confidence            44

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.87  E-value=0.00036  Score=59.06  Aligned_cols=77  Identities=18%  Similarity=0.059  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCC--C-----EEEEEcCCCCc-h--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGH--P-----KFALIRDSASN-F--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~--~-----v~~~~R~~~~~-~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      +.+||+||||+|+||++++..|...+.  +     +++++++.... .  .+..+.+..  ..+. .++.......++++
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~--~~~~-~~~~~~~~~~~~~~   78 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA--LPLL-KDVIATDKEEIAFK   78 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC--CTTE-EEEEEESCHHHHTT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhh--hccc-CCEEEcCCcHHHhC
Confidence            357999999999999999999988774  4     77777753110 0  111111111  1111 12222335677899


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      ++|++++...
T Consensus        79 daDvVvitAg   88 (333)
T 5mdh_A           79 DLDVAILVGS   88 (333)
T ss_dssp             TCSEEEECCS
T ss_pred             CCCEEEEeCC
Confidence            9999998653

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.82  E-value=0.0015  Score=54.17  Aligned_cols=38  Identities=16%  Similarity=0.121  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |+++|+|.|+|. |.+|..++..|.+.|++|++++|+..
T Consensus        12 M~~~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~   49 (296)
T 3qha_A           12 TTEQLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIE   49 (296)
T ss_dssp             ---CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred             ccCCCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            444578999996 99999999999999999999999764

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.73  E-value=0.0026  Score=54.29  Aligned_cols=34  Identities=18%  Similarity=0.170  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~   37 (231)
                      +++|+|.||+|.+|+.+++.|.+.. .+++.+.+.
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~   50 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTAD   50 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCS
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            4689999999999999999999876 467776654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.73  E-value=0.0034  Score=52.34  Aligned_cols=36  Identities=17%  Similarity=0.177  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ++|+|.|+|+ |.+|..++..|.+.|++|+++.|+..
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~   55 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLS   55 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            3579999996 99999999999999999999998753

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=96.70  E-value=0.0011  Score=56.19  Aligned_cols=35  Identities=31%  Similarity=0.357  Sum_probs=27.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCC---EEEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHP---KFALI   35 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~---v~~~~   35 (231)
                      |+++|+|+|.||||.+|+.+++.|++++++   ++.+.
T Consensus         3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~   40 (340)
T 2hjs_A            3 MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA   40 (340)
T ss_dssp             --CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred             CCCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            555679999999999999999999977654   45444

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.64  E-value=0.0046  Score=53.81  Aligned_cols=68  Identities=18%  Similarity=0.124  Sum_probs=52.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +++|+|.|+ |.+|+.++.++.+.|++|++++.+.. .+..    .+ . -..+..|+.|.+.+.++++++|+++.
T Consensus        35 ~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~-~p~~----~~-a-d~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           35 GAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPA-SPAG----AV-A-DRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTT-CHHH----HH-S-SEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCc-Cchh----hh-C-CEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            568999997 99999999999999999998875432 1211    11 1 13556899999999999999998774

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.58  E-value=0.011  Score=50.67  Aligned_cols=67  Identities=18%  Similarity=0.159  Sum_probs=51.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      +++|+|+|+ |.+|+.+++++.+.|++|++++.+... +      ....--..+..++.|.+.+.+.++.+|++.
T Consensus        14 ~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~-~------~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           14 GKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNS-P------CAQVADIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTC-T------TTTTCSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCC-c------hHHhCCceEecCcCCHHHHHHHHHhCCEee
Confidence            568999997 899999999999999999999765421 1      111111345679999999999999999864

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.56  E-value=0.002  Score=54.73  Aligned_cols=37  Identities=24%  Similarity=0.335  Sum_probs=28.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRD   37 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~   37 (231)
                      |++++||+|.||||.+|+.+++.|.+.. .+++.+.+.
T Consensus         1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~   38 (345)
T 2ozp_A            1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSR   38 (345)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECc
Confidence            6657899999999999999999998765 367766654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.55  E-value=0.0049  Score=50.83  Aligned_cols=75  Identities=15%  Similarity=0.102  Sum_probs=51.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++++|+|+ |.+|+.++.+|.+.|. +|+++.|+...  ..++.+.+.   .++.+...++   +++.++++++|+++-
T Consensus       127 ~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~--a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVIn  200 (283)
T 3jyo_A          127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSR--AQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVVN  200 (283)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHH--HHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHH--HHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEEE
Confidence            578999998 8999999999999998 59999887532  111222222   2344444444   345677888999887


Q ss_pred             cccCC
Q 043777           80 PSEYG   84 (231)
Q Consensus        80 ps~~g   84 (231)
                      ....|
T Consensus       201 aTp~G  205 (283)
T 3jyo_A          201 ATPMG  205 (283)
T ss_dssp             CSSTT
T ss_pred             CCCCC
Confidence            55544

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.54  E-value=0.0027  Score=52.16  Aligned_cols=63  Identities=24%  Similarity=0.275  Sum_probs=44.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+|.|+|+||.+|+.+++.|.+.|++|+++.|+..   +.+.+..  .++.     ..+   ..++++++|++++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~---~~~~~~~--~g~~-----~~~---~~~~~~~aDvVi~a   74 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPE---GRDRLQG--MGIP-----LTD---GDGWIDEADVVVLA   74 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHH---HHHHHHH--TTCC-----CCC---SSGGGGTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHH---HHHHHHh--cCCC-----cCC---HHHHhcCCCEEEEc
Confidence            69999999999999999999999999998888642   1111112  2322     122   23466788988863

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.53  E-value=0.0059  Score=52.11  Aligned_cols=37  Identities=24%  Similarity=0.295  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |.++|+|.|+|. |.+|..++..|.+.|++|.++.|+.
T Consensus        19 Mm~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~   55 (358)
T 4e21_A           19 YFQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNV   55 (358)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             hhcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            455689999995 9999999999999999999998874

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.51  E-value=0.0043  Score=51.60  Aligned_cols=63  Identities=19%  Similarity=0.211  Sum_probs=43.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|+|.|+|. |.+|+.+++.|++.|++|+++.|+...   .+.+..  .++..       ..++.++++++|++++
T Consensus         9 ~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~---~~~~~~--~g~~~-------~~~~~e~~~~aDvVi~   71 (306)
T 3l6d_A            9 EFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGK---AAALVA--AGAHL-------CESVKAALSASPATIF   71 (306)
T ss_dssp             SCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHH---HHHHHH--HTCEE-------CSSHHHHHHHSSEEEE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHH--CCCee-------cCCHHHHHhcCCEEEE
Confidence            578999986 999999999999999999999887421   111111  23221       1234556667787775

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.42  E-value=0.0072  Score=50.23  Aligned_cols=34  Identities=18%  Similarity=0.321  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .|+|.|+|+ |.+|+.++..|.+.|++|.++.|+.
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~   63 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTA   63 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            478999996 9999999999999999999998864

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.40  E-value=0.0052  Score=50.59  Aligned_cols=33  Identities=21%  Similarity=0.285  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|+|+ |.+|+.++..|.+.|++|.+++|+.
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~   38 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNP   38 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            68999995 9999999999999999998888864

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.38  E-value=0.015  Score=48.63  Aligned_cols=69  Identities=22%  Similarity=0.186  Sum_probs=47.2

Q ss_pred             CCe-EEEE-cCC-----------------ChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhh------hhhh------cC
Q 043777            4 KSN-VLVI-GAI-----------------GRIGYHFTRRSIEYGHPKFALIRDSASNFNFSL------LRVF------HS   52 (231)
Q Consensus         4 ~~~-ilVt-Gat-----------------G~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~------~~~~------~~   52 (231)
                      +++ |||| |+|                 |..|.+++++++++|+.|+.+.|+.+..+....      ++.+      ..
T Consensus        36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~  115 (313)
T 1p9o_A           36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALS  115 (313)
T ss_dssp             TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CC
T ss_pred             CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccccc
Confidence            345 8888 777                 999999999999999999999997653221100      0100      13


Q ss_pred             CcEEEEEcCCCHHHHHHHHc
Q 043777           53 GVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus        53 ~v~~~~~D~~d~~~l~~al~   72 (231)
                      ++..+.+|....+.+.+++.
T Consensus       116 ~~~~i~v~v~sa~~m~~av~  135 (313)
T 1p9o_A          116 GLLSLEAEENALPGFAEALR  135 (313)
T ss_dssp             SEEEEEEETTTSTTHHHHHH
T ss_pred             ccceeeeccccHHHHHHHHH
Confidence            45567778877777766663

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.37  E-value=0.0075  Score=49.52  Aligned_cols=67  Identities=19%  Similarity=0.248  Sum_probs=46.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC---CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH---PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~---~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      |. +|+|.|+|+ |.+|+.++..|.+.|+   +|.+.+|+...   .+.+... .++...       .+..++++++|++
T Consensus         1 M~-~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~---~~~l~~~-~gi~~~-------~~~~~~~~~aDvV   67 (280)
T 3tri_A            1 MN-TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDK---LDFFKEK-CGVHTT-------QDNRQGALNADVV   67 (280)
T ss_dssp             -C-CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHH---HHHHHHT-TCCEEE-------SCHHHHHSSCSEE
T ss_pred             CC-CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHH---HHHHHHH-cCCEEe-------CChHHHHhcCCeE
Confidence            55 588999998 9999999999999998   89999887531   1111110 244321       2345677889998


Q ss_pred             EEc
Q 043777           78 FIP   80 (231)
Q Consensus        78 f~p   80 (231)
                      ++.
T Consensus        68 ila   70 (280)
T 3tri_A           68 VLA   70 (280)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.35  E-value=0.0073  Score=49.54  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=31.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|+..
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~   35 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPE   35 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence            68999996 99999999999999999999998753

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.34  E-value=0.0096  Score=49.80  Aligned_cols=62  Identities=19%  Similarity=0.245  Sum_probs=43.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|+|.|+|+ |.+|..++..|.+.|++|++++|+..   +.   +.+. .++..       ..++.++++++|++++
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~---~~---~~l~~~g~~~-------~~~~~e~~~~aDvVi~   93 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPA---RA---ASLAALGATI-------HEQARAAARDADIVVS   93 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHH---HH---HHHHTTTCEE-------ESSHHHHHTTCSEEEE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHH---HH---HHHHHCCCEe-------eCCHHHHHhcCCEEEE
Confidence            469999987 99999999999999999999988742   11   1222 33322       1234566777787765

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.29  E-value=0.0013  Score=48.40  Aligned_cols=69  Identities=12%  Similarity=0.074  Sum_probs=46.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++|+|+|+ |.+|+.+++.|.+.|++|.++.|+...  ..+..+.+  +....  ..   +++.++++++|+++....
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~--~~~~a~~~--~~~~~--~~---~~~~~~~~~~Divi~at~   89 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDH--VRAFAEKY--EYEYV--LI---NDIDSLIKNNDVIITATS   89 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHH--HHHHHHHH--TCEEE--EC---SCHHHHHHTCSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHH--HHHHHHHh--CCceE--ee---cCHHHHhcCCCEEEEeCC
Confidence            578999997 999999999999999888888886421  11111222  22222  22   345667789999887533

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.28  E-value=0.011  Score=50.13  Aligned_cols=35  Identities=26%  Similarity=0.332  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|+||+|.+|..+++.+...|+.|++++|+.
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~  205 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTE  205 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence            56899999999999999999999999999998864

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.26  E-value=0.0049  Score=50.63  Aligned_cols=37  Identities=27%  Similarity=0.369  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |++.++|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         1 Mm~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~   37 (283)
T 4e12_A            1 MTGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINT   37 (283)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            655689999997 9999999999999999999998875

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.24  E-value=0.0018  Score=56.95  Aligned_cols=33  Identities=21%  Similarity=0.264  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|+|+ |.+|..++..|.+.|++|++++|+.
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~   35 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDR   35 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCH
Confidence            79999997 9999999999999999999999874

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.21  E-value=0.0084  Score=49.50  Aligned_cols=71  Identities=17%  Similarity=0.141  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +..+|+|+||+|.+|..+++.+...|++|++++|+...   .+..+.+  +... ..|..+.+++.+.++++|++|-
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~---~~~~~~~--ga~~-~~~~~~~~~~~~~~~~~d~vid  195 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK---LALPLAL--GAEE-AATYAEVPERAKAWGGLDLVLE  195 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGG---SHHHHHT--TCSE-EEEGGGHHHHHHHTTSEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHhc--CCCE-EEECCcchhHHHHhcCceEEEE
Confidence            35789999999999999999999999999999986432   2222332  3322 2466552344455577888775

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.15  E-value=0.032  Score=47.47  Aligned_cols=69  Identities=19%  Similarity=0.143  Sum_probs=52.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      ++|+|+|+ |..|+.++++|.+.|+++++++.+... + .   ..+ .. ..+..|+.|.+.+.++++++|.++...
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~-~-~---~~~-~~-~~~~~~~~d~~~l~~~~~~~d~v~~~~   70 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRS-P-A---GQV-AD-EQIVAGFFDSERIEDLVKGSDVTTYDL   70 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTC-T-T---GGG-SS-EEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCC-c-h---hhh-Cc-eEEECCCCCHHHHHHHHhcCCEEEecc
Confidence            58999997 899999999999999999888765321 1 0   011 11 345679999999999888899877533

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.10  E-value=0.014  Score=46.36  Aligned_cols=66  Identities=14%  Similarity=0.128  Sum_probs=48.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|||.|| |-+|..-++.|++.|..|++++....  +   .+..+.  .++.++..++.+.     -+.++|.++..
T Consensus        31 gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~--~---~l~~l~~~~~i~~i~~~~~~~-----dL~~adLVIaA   98 (223)
T 3dfz_A           31 GRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVS--A---EINEWEAKGQLRVKRKKVGEE-----DLLNVFFIVVA   98 (223)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCC--H---HHHHHHHTTSCEEECSCCCGG-----GSSSCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCC--H---HHHHHHHcCCcEEEECCCCHh-----HhCCCCEEEEC
Confidence            678999998 99999999999999999999987542  1   112222  4577776666432     25678887765

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.08  E-value=0.0054  Score=51.07  Aligned_cols=71  Identities=15%  Similarity=-0.002  Sum_probs=43.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEc--CCCC-chhhhhhhh---hcCCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIR--DSAS-NFNFSLLRV---FHSGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R--~~~~-~~~~~~~~~---~~~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |||+|+||+|++|++++..|+.+++  ++.++++  +... ......+.+   +...+.+.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            5899999999999999999998885  3555655  2210 000000111   112333333 2  2    456889999


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++...
T Consensus        74 Vi~~ag   79 (303)
T 1o6z_A           74 VVITAG   79 (303)
T ss_dssp             EEECCC
T ss_pred             EEEcCC
Confidence            998654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.08  E-value=0.0078  Score=51.30  Aligned_cols=71  Identities=18%  Similarity=0.248  Sum_probs=50.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .++|+|+|+ |.+|+.++..|...|.+|+++.|+..   +.+.+.... ..+.   ....+.+.+.+.++++|+++...
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~---r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVE---RLSYLETLFGSRVE---LLYSNSAEIETAVAEADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHHGGGSE---EEECCHHHHHHHHHTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHH---HHHHHHHhhCceeE---eeeCCHHHHHHHHcCCCEEEECC
Confidence            478999999 99999999999999999999998742   122222221 2222   22335667888888999988644

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.07  E-value=0.0069  Score=49.70  Aligned_cols=34  Identities=18%  Similarity=0.220  Sum_probs=30.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |+|.|+|. |.+|..++..|.+.|++|++++|+..
T Consensus         2 ~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~   35 (287)
T 3pdu_A            2 TTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPA   35 (287)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence            58999985 99999999999999999999998753

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.05  E-value=0.0059  Score=51.05  Aligned_cols=37  Identities=19%  Similarity=0.181  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      |.++|+|.|+|| |.+|..++..|...|+ +|++++++.
T Consensus         1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~   38 (317)
T 2ewd_A            1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAE   38 (317)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCc
Confidence            887889999998 9999999999999998 898888875

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.04  E-value=0.024  Score=46.55  Aligned_cols=69  Identities=12%  Similarity=0.156  Sum_probs=48.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++++|+|+ |.+|+.++..|.+.|. +|++..|+...   +   +.+...+...     ..+++.++++++|+++....
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~---a---~~la~~~~~~-----~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSR---F---NNWSLNINKI-----NLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGG---G---TTCCSCCEEE-----CHHHHHHTGGGCSEEEECCC
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHH---H---HHHHHhcccc-----cHhhHHHHhcCCCEEEECcc
Confidence            468999997 8999999999999998 89999987531   1   1222222221     34567777889999886544


Q ss_pred             CC
Q 043777           83 YG   84 (231)
Q Consensus        83 ~g   84 (231)
                      .|
T Consensus       185 ~G  186 (277)
T 3don_A          185 AG  186 (277)
T ss_dssp             --
T ss_pred             CC
Confidence            33

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.01  E-value=0.012  Score=48.83  Aligned_cols=74  Identities=15%  Similarity=0.010  Sum_probs=49.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      .++++|+|+ |.+|+.++..|.+.|. +|++..|+...  ..++.+.+.....    +..+.+++.+++.++|+++....
T Consensus       141 ~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~k--a~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t~  213 (297)
T 2egg_A          141 GKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEK--AERLVREGDERRS----AYFSLAEAETRLAEYDIIINTTS  213 (297)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHH--HHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECSC
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHH--HHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECCC
Confidence            578999998 8899999999999997 89999887421  1112222221110    11234567788889999887544


Q ss_pred             CC
Q 043777           83 YG   84 (231)
Q Consensus        83 ~g   84 (231)
                      .+
T Consensus       214 ~~  215 (297)
T 2egg_A          214 VG  215 (297)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.00  E-value=0.016  Score=46.81  Aligned_cols=75  Identities=20%  Similarity=0.206  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCC----------------chhhh----hhhhhcCCcE--EEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSAS----------------NFNFS----LLRVFHSGVF--DYWGL   60 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~----------------~~~~~----~~~~~~~~v~--~~~~D   60 (231)
                      .++|+|.|+ |.+|+.+++.|...|. ++++++++.-.                .++.+    .+..+.+.+.  .+..+
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            468999997 8999999999999996 78888887511                01111    1122223444  33444


Q ss_pred             CCCHHHHHHHHccCCEEEEc
Q 043777           61 LEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus        61 ~~d~~~l~~al~~~d~~f~p   80 (231)
                      ++ .+.+.+.++++|+++..
T Consensus       110 ~~-~~~~~~~~~~~DvVi~~  128 (249)
T 1jw9_B          110 LD-DAELAALIAEHDLVLDC  128 (249)
T ss_dssp             CC-HHHHHHHHHTSSEEEEC
T ss_pred             CC-HhHHHHHHhCCCEEEEe
Confidence            54 45677788899988754

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.00  E-value=0.0041  Score=51.96  Aligned_cols=72  Identities=15%  Similarity=0.118  Sum_probs=45.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc--CCCCchhhhhhhhhcC----CcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR--DSASNFNFSLLRVFHS----GVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R--~~~~~~~~~~~~~~~~----~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      |+|.|+|+ |.+|+.++..|.+.|++|+++.|  +..   +.+.+.....    +.........+.+++.++++++|+++
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi   76 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTE---ILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVL   76 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHH---HHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHH---HHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEE
Confidence            57999997 99999999999999999999998  532   1111111000    11100001222335667788999988


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      +.
T Consensus        77 ~~   78 (335)
T 1txg_A           77 LG   78 (335)
T ss_dssp             EC
T ss_pred             Ec
Confidence            74

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=95.97  E-value=0.0064  Score=50.87  Aligned_cols=34  Identities=12%  Similarity=-0.059  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~   38 (231)
                      +|+|.|+|+ |.+|..++..|.+.| ++|+++.|+.
T Consensus        24 ~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           24 MTTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            478999995 999999999999999 9999999975

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=95.95  E-value=0.013  Score=52.85  Aligned_cols=69  Identities=14%  Similarity=0.153  Sum_probs=55.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-C-CcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-S-GVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~-~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      +++++|+|+ |.+|+.+++.|.+.|++|+++..+..      ..+... . ++.++.+|.++++.+.++ +++++.+++
T Consensus       127 ~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~------~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~  198 (565)
T 4gx0_A          127 RGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYD------QALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA  198 (565)
T ss_dssp             CSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHH------HHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHH------HHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE
Confidence            467999998 99999999999999999999987642      122333 5 899999999999999886 456777665

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=95.94  E-value=0.058  Score=45.90  Aligned_cols=72  Identities=15%  Similarity=0.092  Sum_probs=53.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps   81 (231)
                      +|+|+|+|+ |.+|+.+++++.+.|++|.++...+.. + .   ..+ . -..+..|+.|.+.+.++++  ++|.++...
T Consensus        11 ~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~-~-~---~~~-~-d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~   82 (391)
T 1kjq_A           11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADA-P-A---MHV-A-HRSHVINMLDGDALRRVVELEKPHYIVPEI   82 (391)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTC-G-G---GGG-S-SEEEECCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCC-c-h---hhh-c-cceEECCCCCHHHHHHHHHHcCCCEEEECC
Confidence            579999987 899999999999999999888765421 1 0   011 1 1356678899999888886  689887654


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ++
T Consensus        83 e~   84 (391)
T 1kjq_A           83 EA   84 (391)
T ss_dssp             SC
T ss_pred             Cc
Confidence            43

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.94  E-value=0.013  Score=48.11  Aligned_cols=33  Identities=21%  Similarity=0.249  Sum_probs=29.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~~V~~~~~~~   33 (296)
T 2gf2_A            1 MPVGFIGL-GNMGNPMAKNLMKHGYPLIIYDVFP   33 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHTTCCEEEECSST
T ss_pred             CeEEEEec-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            47999996 9999999999999999999998864

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=95.92  E-value=0.0077  Score=50.66  Aligned_cols=35  Identities=26%  Similarity=0.370  Sum_probs=31.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      |+ +|+|+|.|+ |.+|..++..|.+.|++|++++|+
T Consensus         1 M~-~mkI~IiGa-G~~G~~~a~~L~~~g~~V~~~~r~   35 (335)
T 3ghy_A            1 MS-LTRICIVGA-GAVGGYLGARLALAGEAINVLARG   35 (335)
T ss_dssp             -C-CCCEEEESC-CHHHHHHHHHHHHTTCCEEEECCH
T ss_pred             CC-CCEEEEECc-CHHHHHHHHHHHHCCCEEEEEECh
Confidence            66 689999997 999999999999999999999985

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.87  E-value=0.0087  Score=48.88  Aligned_cols=34  Identities=18%  Similarity=0.116  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|+|+ |.+|+.++..|.+.|.+|+++.|+.
T Consensus       119 ~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~  152 (271)
T 1nyt_A          119 GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV  152 (271)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCH
Confidence            578999998 8899999999999999999998874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=95.85  E-value=0.0098  Score=49.75  Aligned_cols=71  Identities=23%  Similarity=0.148  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-----cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-----QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-----~~d~~f   78 (231)
                      .++++|+||+|.+|..+++.+...|++|++++|+..   +.+..+.+  +.. ...|+++.+++.+.+.     ++|+++
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~---~~~~~~~~--g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDE---KIAYLKQI--GFD-AAFNYKTVNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHT--TCS-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHhc--CCc-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence            578999999999999999999999999999888632   12222232  332 2357776333433332     356655


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      ..
T Consensus       220 ~~  221 (333)
T 1v3u_A          220 DN  221 (333)
T ss_dssp             ES
T ss_pred             EC
Confidence            43

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=95.85  E-value=0.028  Score=47.21  Aligned_cols=74  Identities=22%  Similarity=0.230  Sum_probs=47.4

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCch--hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHc
Q 043777            1 MAG-KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNF--NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         1 M~~-~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~--~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~   72 (231)
                      |++ .+||.|+|+ |.+|+.++..|+..|.  ++.+++++...-.  ..++....+   .++.+...|       .++++
T Consensus         1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~   72 (326)
T 3pqe_A            1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCK   72 (326)
T ss_dssp             -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGT
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhC
Confidence            543 579999996 9999999999999886  7888887532100  001111111   244544433       24788


Q ss_pred             cCCEEEEccc
Q 043777           73 QVDVRFIPSE   82 (231)
Q Consensus        73 ~~d~~f~ps~   82 (231)
                      ++|+++++..
T Consensus        73 ~aDvVvi~ag   82 (326)
T 3pqe_A           73 DADIVCICAG   82 (326)
T ss_dssp             TCSEEEECCS
T ss_pred             CCCEEEEecc
Confidence            9999998653

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=95.82  E-value=0.01  Score=49.44  Aligned_cols=65  Identities=22%  Similarity=0.078  Sum_probs=43.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|+|.|+|. |.+|..++..|.+.|+ +|++++|+.+. .+.+.+..  .++..       ..++.++++++|++++
T Consensus        24 ~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~-~~~~~~~~--~g~~~-------~~~~~e~~~~aDvVi~   89 (312)
T 3qsg_A           24 AMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAE-SWRPRAEE--LGVSC-------KASVAEVAGECDVIFS   89 (312)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHH-HHHHHHHH--TTCEE-------CSCHHHHHHHCSEEEE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCH-HHHHHHHH--CCCEE-------eCCHHHHHhcCCEEEE
Confidence            578999996 9999999999999999 99999986200 01111111  34332       1234556778898876

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=95.82  E-value=0.0085  Score=50.07  Aligned_cols=33  Identities=33%  Similarity=0.470  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|.|+ |.+|..++..|.+.|++|+++.|+.
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~~~~r~~   35 (320)
T 3i83_A            3 LNILVIGT-GAIGSFYGALLAKTGHCVSVVSRSD   35 (320)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCh
Confidence            79999997 9999999999999999999999974

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.80  E-value=0.01  Score=49.11  Aligned_cols=34  Identities=26%  Similarity=0.485  Sum_probs=31.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++|.|+||.|.+|..++..|.+.|++|.++.|+.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            5899999889999999999999999999998764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.80  E-value=0.025  Score=48.46  Aligned_cols=70  Identities=26%  Similarity=0.303  Sum_probs=50.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhh-hcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRV-FHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|+|+|+ |.+|+.+++.+...|.+|++++|+..   +.+.+.. +...+   ..+..+.+++.+.++++|+++..
T Consensus       168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~---~l~~~~~~~g~~~---~~~~~~~~~l~~~l~~aDvVi~~  238 (377)
T 2vhw_A          168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDINID---KLRQLDAEFCGRI---HTRYSSAYELEGAVKRADLVIGA  238 (377)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHTTTSS---EEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHH---HHHHHHHhcCCee---EeccCCHHHHHHHHcCCCEEEEC
Confidence            578999998 99999999999999999999988642   1111222 22222   23445677888889999998873

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.79  E-value=0.019  Score=46.32  Aligned_cols=61  Identities=15%  Similarity=0.090  Sum_probs=40.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHH
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAV   71 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al   71 (231)
                      |||+|+||+|.+|+.+++.+.+. ++++......... . .+.+.   .+.. +..|++.++...+.+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d-l-~~~~~---~~~D-vvIDfT~p~a~~~~~   62 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP-L-SLLTD---GNTE-VVIDFTHPDVVMGNL   62 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC-T-HHHHH---TTCC-EEEECSCTTTHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC-H-HHHhc---cCCc-EEEEccChHHHHHHH
Confidence            58999999999999999999876 7888766554321 1 11111   2223 556888877665443

>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}

Probab=95.77  E-value=0.026  Score=48.40  Aligned_cols=71  Identities=20%  Similarity=0.161  Sum_probs=50.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRF   78 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f   78 (231)
                      |+++++|+|+|+ |.++..+++++.+.|+.+++++......+   .. .+ . -..+..|+.|.+.+.++++.  +|.++
T Consensus         4 m~~~~~ilI~g~-g~~~~~~~~a~~~~G~~~v~v~~~~~~~~---~~-~~-a-d~~~~~~~~d~~~l~~~~~~~~~d~v~   76 (403)
T 4dim_A            4 MYDNKRLLILGA-GRGQLGLYKAAKELGIHTIAGTMPNAHKP---CL-NL-A-DEISYMDISNPDEVEQKVKDLNLDGAA   76 (403)
T ss_dssp             --CCCEEEEECC-CGGGHHHHHHHHHHTCEEEEEECSSCCHH---HH-HH-C-SEEEECCTTCHHHHHHHTTTSCCSEEE
T ss_pred             ccCCCEEEEECC-cHhHHHHHHHHHHCCCEEEEEcCCCCCCc---ch-hh-C-CeEEEecCCCHHHHHHHHHHcCCCEEE
Confidence            556789999998 66899999999999999998875321111   00 11 1 14567789999999998876  57655

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=95.75  E-value=0.011  Score=47.74  Aligned_cols=31  Identities=19%  Similarity=0.210  Sum_probs=27.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR   36 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R   36 (231)
                      |+|.|+|+ |.+|+.++..|.+.|++|++..|
T Consensus         1 M~I~iIG~-G~mG~~la~~l~~~g~~V~~~~~   31 (264)
T 1i36_A            1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLE   31 (264)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCT
T ss_pred             CeEEEEec-hHHHHHHHHHHHHCCCeEEEeCC
Confidence            57999996 99999999999999999988665

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=95.74  E-value=0.0085  Score=49.89  Aligned_cols=33  Identities=21%  Similarity=0.386  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|.|+ |.+|..++..|.+.|++|+++.|+.
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~~V~~~~r~~   35 (312)
T 3hn2_A            3 LRIAIVGA-GALGLYYGALLQRSGEDVHFLLRRD   35 (312)
T ss_dssp             -CEEEECC-STTHHHHHHHHHHTSCCEEEECSTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEEcCc
Confidence            78999997 9999999999999999999999964

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.72  E-value=0.0051  Score=48.61  Aligned_cols=34  Identities=24%  Similarity=0.313  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEE-EEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFA-LIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~-~~R~~   38 (231)
                      +|+|.|+| +|.+|..++..|.+.|++|.+ ..|+.
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~   57 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGP   57 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence            57999999 599999999999999999998 67654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.69  E-value=0.038  Score=45.65  Aligned_cols=67  Identities=27%  Similarity=0.361  Sum_probs=48.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .++++|.|+ |.+|+.+++.|...|.+|++..|+..   +.+.+..  .++..+     +..++.++++++|+++...
T Consensus       157 g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~---~~~~~~~--~g~~~~-----~~~~l~~~l~~aDvVi~~~  223 (300)
T 2rir_A          157 GSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSA---HLARITE--MGLVPF-----HTDELKEHVKDIDICINTI  223 (300)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHH--TTCEEE-----EGGGHHHHSTTCSEEEECC
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHH---HHHHHHH--CCCeEE-----chhhHHHHhhCCCEEEECC
Confidence            579999997 99999999999999999999988642   1111112  344432     2345778889999988643

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=95.67  E-value=0.0088  Score=49.36  Aligned_cols=33  Identities=18%  Similarity=0.195  Sum_probs=30.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|.|+ |.+|..++..|.+.|++|+++.|+.
T Consensus         3 mkI~iiGa-Ga~G~~~a~~L~~~g~~V~~~~r~~   35 (294)
T 3g17_A            3 LSVAIIGP-GAVGTTIAYELQQSLPHTTLIGRHA   35 (294)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEecc
Confidence            78999997 9999999999999999999999974

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.67  E-value=0.042  Score=45.28  Aligned_cols=67  Identities=22%  Similarity=0.305  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .++++|.|+ |.+|+.+++.|...|.+|.+..|+..   +.+....  .++..+     +.+++.++++++|+++...
T Consensus       155 g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~---~~~~~~~--~g~~~~-----~~~~l~~~l~~aDvVi~~~  221 (293)
T 3d4o_A          155 GANVAVLGL-GRVGMSVARKFAALGAKVKVGARESD---LLARIAE--MGMEPF-----HISKAAQELRDVDVCINTI  221 (293)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHH--TTSEEE-----EGGGHHHHTTTCSEEEECC
T ss_pred             CCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHH---HHHHHHH--CCCeec-----ChhhHHHHhcCCCEEEECC
Confidence            579999996 99999999999999999999988642   1111112  344432     2346778889999988754

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.63  E-value=0.0098  Score=50.45  Aligned_cols=75  Identities=17%  Similarity=0.024  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCCCCch-h--hhhhhhhc-CC-cEEEEEcCCCHHHHHHHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDSASNF-N--FSLLRVFH-SG-VFDYWGLLEDEKSLLEAV   71 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~~~~~-~--~~~~~~~~-~~-v~~~~~D~~d~~~l~~al   71 (231)
                      ..||.|+||+|+||+.++-.|.....       ++.+++....... +  +..+.+.. .. ..++..+     ...+++
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~-----~~~~a~   98 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA-----DPRVAF   98 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES-----CHHHHT
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC-----ChHHHh
Confidence            35899999999999999987766532       4566665432100 0  11111211 11 1222221     246789


Q ss_pred             ccCCEEEEcccC
Q 043777           72 KQVDVRFIPSEY   83 (231)
Q Consensus        72 ~~~d~~f~ps~~   83 (231)
                      +++|+++++...
T Consensus        99 ~~advVvi~aG~  110 (345)
T 4h7p_A           99 DGVAIAIMCGAF  110 (345)
T ss_dssp             TTCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            999999987643

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=95.61  E-value=0.005  Score=53.84  Aligned_cols=33  Identities=18%  Similarity=0.216  Sum_probs=30.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|+|+ |.+|..++..|.+.|++|++++|+.
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~   33 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSS   33 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCH
Confidence            58999995 9999999999999999999998864

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.57  E-value=0.07  Score=43.12  Aligned_cols=67  Identities=21%  Similarity=0.243  Sum_probs=47.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcccCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSEYG   84 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~~g   84 (231)
                      +++|+|+ |..|+.++..|.+.|. +|++..|+..   ++   +.+.......     ..+++.++++++|+++.....|
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~---ka---~~la~~~~~~-----~~~~~~~~~~~aDiVInatp~g  177 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIE---RA---KALDFPVKIF-----SLDQLDEVVKKAKSLFNTTSVG  177 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHH---HH---HTCCSSCEEE-----EGGGHHHHHHTCSEEEECSSTT
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHH---HH---HHHHHHcccC-----CHHHHHhhhcCCCEEEECCCCC
Confidence            7999997 9999999999999997 8999999742   12   2222222221     2345677888999988744433

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=95.55  E-value=0.0095  Score=50.62  Aligned_cols=35  Identities=20%  Similarity=0.266  Sum_probs=28.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALI   35 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~   35 (231)
                      |+++++|.|.||+|.+|+.+++.|.+.. .+++.+.
T Consensus         1 m~~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            1 MADKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             -CCCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCCCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            6657899999999999999999988764 4666665

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=95.55  E-value=0.066  Score=46.37  Aligned_cols=72  Identities=19%  Similarity=0.252  Sum_probs=53.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f~ps   81 (231)
                      +|+|+|+|+ |.+|+.+++++.+.|++|+++...+.. +..    .+ . -..+..|+.|.+.+.++++  ++|.++...
T Consensus        19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~-~~~----~~-a-d~~~~~~~~d~~~l~~~~~~~~~d~V~~~~   90 (433)
T 2dwc_A           19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANA-PAM----QV-A-HRSYVGNMMDKDFLWSVVEREKPDAIIPEI   90 (433)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTC-HHH----HH-S-SEEEESCTTCHHHHHHHHHHHCCSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCC-hhh----hh-c-ceEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence            468999997 899999999999999999988865421 100    11 1 1346678999999988886  689888755


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ++
T Consensus        91 e~   92 (433)
T 2dwc_A           91 EA   92 (433)
T ss_dssp             SC
T ss_pred             cc
Confidence            54

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=95.50  E-value=0.078  Score=44.72  Aligned_cols=68  Identities=16%  Similarity=0.165  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcC-CCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLL-EDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~-~d~~~l~~al~~~d~~f~   79 (231)
                      ||+|+|+|| |..|..++.++.+.|++|++++.++.. +..    .+.+  .++..|. .|.+.+....+++|.++.
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~-~~~----~~aD--~~~~~~~~~d~~~~~~~~~~~D~v~~   69 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQA-LIR----NYAD--EFYCFDVIKEPEKLLELSKRVDAVLP   69 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTC-TTT----TTSS--EEEECCTTTCHHHHHHHHTSSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCC-hhH----hhCC--EEEECCCCcCHHHHHHHhcCCCEEEE
Confidence            468999997 899999999999999999999876431 100    1111  3445554 577778778888998754

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=95.42  E-value=0.018  Score=48.25  Aligned_cols=35  Identities=20%  Similarity=0.253  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..+|+|+||+|.+|...++.+...|.+|++++|+.
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~  183 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD  183 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            56899999999999999999999999999998864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=95.41  E-value=0.027  Score=47.34  Aligned_cols=35  Identities=29%  Similarity=0.405  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..+|+|+||+|.+|...++.+...|.+|++++|+.
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~  194 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT  194 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            56899999999999999999999999999998865

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=95.40  E-value=0.015  Score=48.51  Aligned_cols=35  Identities=14%  Similarity=0.174  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..+|+|+||+|.+|...++.+...|.+|++++|+.
T Consensus       141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~  175 (325)
T 3jyn_A          141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSP  175 (325)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            56899999999999999999999999999998864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=95.39  E-value=0.013  Score=49.01  Aligned_cols=71  Identities=15%  Similarity=0.106  Sum_probs=46.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHH---HHHHHc--cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKS---LLEAVK--QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~---l~~al~--~~d~~f   78 (231)
                      .++|+|+||+|.+|..+++.+...|++|++++|+..   +.+.+..+.  .. ...|+++.+.   +.+...  ++|+++
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~---~~~~~~~~g--~~-~~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE---KAETARKLG--CH-HTINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHT--CS-EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHcC--CC-EEEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            568999999999999999999999999999988642   122223332  22 2246665433   333332  467766


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      ..
T Consensus       220 ~~  221 (333)
T 1wly_A          220 DS  221 (333)
T ss_dssp             EC
T ss_pred             EC
Confidence            54

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=95.39  E-value=0.047  Score=45.98  Aligned_cols=64  Identities=20%  Similarity=0.193  Sum_probs=45.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .|+|.|+|+ |.+|+.++..|.+.|++|++..|+....  .+....  .++...        ++.++++++|++++.
T Consensus        16 ~~~I~IIG~-G~mG~alA~~L~~~G~~V~~~~~~~~~~--~~~a~~--~G~~~~--------~~~e~~~~aDvVila   79 (338)
T 1np3_A           16 GKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSAT--VAKAEA--HGLKVA--------DVKTAVAAADVVMIL   79 (338)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHH--HHHHHH--TTCEEE--------CHHHHHHTCSEEEEC
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCcCEEEEEECChHHH--HHHHHH--CCCEEc--------cHHHHHhcCCEEEEe
Confidence            578999996 9999999999999999999888865310  111111  454321        244577889998864

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=95.39  E-value=0.035  Score=49.23  Aligned_cols=70  Identities=13%  Similarity=0.138  Sum_probs=45.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +|+|.|+|. |.+|..++..|.+.|++|.+..|+...   .+.+.... .+..+..  ..+.+++.+.++++|++++
T Consensus         4 ~~kIgiIGl-G~MG~~lA~~L~~~G~~V~v~dr~~~~---~~~l~~~g~~g~~i~~--~~s~~e~v~~l~~aDvVil   74 (484)
T 4gwg_A            4 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSK---VDDFLANEAKGTKVVG--AQSLKEMVSKLKKPRRIIL   74 (484)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHH---HHHHHHTTTTTSSCEE--CSSHHHHHHTBCSSCEEEE
T ss_pred             CCEEEEECh-hHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHhcccCCCceec--cCCHHHHHhhccCCCEEEE
Confidence            578999996 999999999999999999999987531   11111111 1221111  2345555555556888775

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=95.38  E-value=0.013  Score=47.77  Aligned_cols=34  Identities=18%  Similarity=0.145  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|+|+ |.+|+.++..|++.|++|+++.|+.
T Consensus       119 ~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~  152 (272)
T 1p77_A          119 NQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF  152 (272)
T ss_dssp             TCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            578999998 8899999999999999999999974

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=95.38  E-value=0.016  Score=49.30  Aligned_cols=34  Identities=21%  Similarity=0.226  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+|.|.|+ |.+|..++..|.++|++|++++|+.
T Consensus        29 ~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~   62 (356)
T 3k96_A           29 KHPIAILGA-GSWGTALALVLARKGQKVRLWSYES   62 (356)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            579999997 9999999999999999999999974

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=95.37  E-value=0.014  Score=48.77  Aligned_cols=69  Identities=28%  Similarity=0.284  Sum_probs=44.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC----CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG----HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g----~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |.++|+|.|+|+ |.+|..++..|.+.|    ++|+++.|+... .+.+.+..  .++.+.    .+   ..++++++|+
T Consensus        19 ~~~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~-~~~~~l~~--~G~~~~----~~---~~e~~~~aDv   87 (322)
T 2izz_A           19 YFQSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMDL-ATVSALRK--MGVKLT----PH---NKETVQHSDV   87 (322)
T ss_dssp             ---CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTTS-HHHHHHHH--HTCEEE----SC---HHHHHHHCSE
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCccH-HHHHHHHH--cCCEEe----CC---hHHHhccCCE
Confidence            334678999997 999999999999999    899999887531 01111111  344321    12   3456677898


Q ss_pred             EEEc
Q 043777           77 RFIP   80 (231)
Q Consensus        77 ~f~p   80 (231)
                      +|+.
T Consensus        88 Vila   91 (322)
T 2izz_A           88 LFLA   91 (322)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            8863

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=95.36  E-value=0.02  Score=46.87  Aligned_cols=32  Identities=19%  Similarity=0.214  Sum_probs=27.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI   35 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~   35 (231)
                      ++|+|.|+|+ |.+|+.++..|.+.|++|.++.
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~   33 (295)
T 1yb4_A            2 NAMKLGFIGL-GIMGSPMAINLARAGHQLHVTT   33 (295)
T ss_dssp             --CEEEECCC-STTHHHHHHHHHHTTCEEEECC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc
Confidence            3579999995 9999999999999999998776

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.36  E-value=0.019  Score=48.18  Aligned_cols=37  Identities=19%  Similarity=0.235  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      |.+++||.|+|| |.+|..++..|...|+ +|.+++++.
T Consensus         1 m~~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~   38 (322)
T 1t2d_A            1 MAPKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVK   38 (322)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence            776789999998 9999999999999997 877777765

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=95.35  E-value=0.021  Score=48.43  Aligned_cols=73  Identities=14%  Similarity=0.090  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ++||.|+||+|++|+.++..|+..|  .++.+++++...-. .+..+.+.. ...     ++.-..+..++++++|++++
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~-----~i~~t~d~~~al~dADvVvi   82 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGL-----NLTFTSDIKEALTDAKYIVS   82 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTC-----CCEEESCHHHHHTTEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCC-----ceEEcCCHHHHhCCCCEEEE
Confidence            6799999999999999999999988  47888887532100 010111111 111     11112345678899999988


Q ss_pred             cc
Q 043777           80 PS   81 (231)
Q Consensus        80 ps   81 (231)
                      ..
T Consensus        83 ta   84 (343)
T 3fi9_A           83 SG   84 (343)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.34  E-value=0.013  Score=48.87  Aligned_cols=71  Identities=13%  Similarity=0.091  Sum_probs=46.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHH---HHc--cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLE---AVK--QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~---al~--~~d~~f   78 (231)
                      .++|+|+||+|.+|..+++.+...|++|++++|+..   +.+.+..+  +.. ...|..+.+...+   ...  ++|+++
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~---~~~~~~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQ---KAQSALKA--GAW-QVINYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHH---HHHHHHHH--TCS-EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHc--CCC-EEEECCCccHHHHHHHHhCCCCceEEE
Confidence            578999999999999999999999999999988642   12222233  222 2246666543333   332  367666


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      ..
T Consensus       215 ~~  216 (327)
T 1qor_A          215 DS  216 (327)
T ss_dssp             EC
T ss_pred             EC
Confidence            54

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.33  E-value=0.079  Score=44.24  Aligned_cols=61  Identities=25%  Similarity=0.302  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .++|.|.|. |.||+.+++.|...|++|.+..|+....          .++...    ....++.++++++|++++
T Consensus       139 g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~----------~~~~~~----~~~~~l~ell~~aDiV~l  199 (315)
T 3pp8_A          139 EFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSW----------PGVESY----VGREELRAFLNQTRVLIN  199 (315)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCC----------TTCEEE----ESHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhh----------hhhhhh----cccCCHHHHHhhCCEEEE
Confidence            578999997 9999999999999999999999875310          122211    123688899999999876

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=95.30  E-value=0.027  Score=47.29  Aligned_cols=36  Identities=22%  Similarity=0.206  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..+|+|+||+|.+|...++.+...|.+|++++|+..
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~  180 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNK  180 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence            578999999999999999988889999999998754

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.30  E-value=0.047  Score=46.13  Aligned_cols=67  Identities=19%  Similarity=0.171  Sum_probs=45.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCH-HHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE-KSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~l~~al~~~d~~f~p   80 (231)
                      .++|.|+|. |.+|..+++.|.+.|++|++.+|+..   ..+....  .++..    ..+. +.+..+.+++|++++.
T Consensus         8 ~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~---~~~~a~~--~G~~~----~~~~~e~~~~a~~~aDlVila   75 (341)
T 3ktd_A            8 SRPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRS---GAKSAVD--EGFDV----SADLEATLQRAAAEDALIVLA   75 (341)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHH---HHHHHHH--TTCCE----ESCHHHHHHHHHHTTCEEEEC
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHH--cCCee----eCCHHHHHHhcccCCCEEEEe
Confidence            468999995 99999999999999999999988642   1111111  44422    1233 3345556678998864

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.30  E-value=0.022  Score=45.68  Aligned_cols=34  Identities=24%  Similarity=0.395  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+|.|+|+ |.+|+.++..|.+.|++|++..|+.
T Consensus        19 ~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~   52 (245)
T 3dtt_A           19 GMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDP   52 (245)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            579999985 9999999999999999999999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=95.30  E-value=0.018  Score=48.41  Aligned_cols=35  Identities=17%  Similarity=0.104  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|+||+|.+|..+++.+...|++|++++|+.
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~  190 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK  190 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            57899999999999999999999999999988864

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=95.26  E-value=0.019  Score=46.73  Aligned_cols=34  Identities=21%  Similarity=0.359  Sum_probs=31.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |+|.|.|+ |.+|+.++..|.+.|++|+++.|+..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~   34 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ   34 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence            57999998 99999999999999999999999764

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=95.23  E-value=0.019  Score=48.04  Aligned_cols=35  Identities=17%  Similarity=0.203  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|+||+|.+|..+++.+...|++|++++|+.
T Consensus       150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~  184 (336)
T 4b7c_A          150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA  184 (336)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            57899999999999999999999999999998864

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=95.22  E-value=0.018  Score=47.88  Aligned_cols=32  Identities=19%  Similarity=0.225  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|.|+ |.+|..++..|. +|++|+++.|+.
T Consensus         3 mkI~IiGa-Ga~G~~~a~~L~-~g~~V~~~~r~~   34 (307)
T 3ego_A            3 LKIGIIGG-GSVGLLCAYYLS-LYHDVTVVTRRQ   34 (307)
T ss_dssp             CEEEEECC-SHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred             CEEEEECC-CHHHHHHHHHHh-cCCceEEEECCH
Confidence            79999997 999999999999 999999999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=95.18  E-value=0.024  Score=47.75  Aligned_cols=71  Identities=13%  Similarity=0.015  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHH---HHHHHc--cCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKS---LLEAVK--QVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~---l~~al~--~~d~~   77 (231)
                      .++|+|+||+|.+|..+++.+... |.+|++++|+..   +.+.++.+.  ... ..|..+.+.   +.+...  ++|++
T Consensus       171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~---~~~~~~~~g--~~~-~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE---AVEAAKRAG--ADY-VINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHH---HHHHHHHHT--CSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHH---HHHHHHHhC--CCE-EecCCCccHHHHHHHHhcCCCceEE
Confidence            578999999989999999999998 999998887642   122223332  221 236655433   444443  46666


Q ss_pred             EEc
Q 043777           78 FIP   80 (231)
Q Consensus        78 f~p   80 (231)
                      +..
T Consensus       245 i~~  247 (347)
T 1jvb_A          245 IDL  247 (347)
T ss_dssp             EES
T ss_pred             EEC
Confidence            643

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.15  E-value=0.024  Score=44.36  Aligned_cols=34  Identities=15%  Similarity=0.166  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus        19 ~~~I~iiG~-G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           19 GMEITIFGK-GNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            578999995 9999999999999999999998864

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=95.14  E-value=0.035  Score=49.97  Aligned_cols=66  Identities=17%  Similarity=0.108  Sum_probs=52.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHH-ccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAV-KQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al-~~~d~~f~p   80 (231)
                      ++++|+|+ |.+|+++++.|.+.|++|+++.+++...      +..   ..++.+|.+|++.+.++= +++|.+.+.
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~------~~~---~~~i~gD~t~~~~L~~agi~~ad~vi~~  415 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPV------CND---HVVVYGDATVGQTLRQAGIDRASGIIVT  415 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSS------CCS---SCEEESCSSSSTHHHHHTTTSCSEEEEC
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHH------hhc---CCEEEeCCCCHHHHHhcCccccCEEEEE
Confidence            67999998 9999999999999999999999876421      111   278999999999987753 557876654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.13  E-value=0.032  Score=47.84  Aligned_cols=70  Identities=16%  Similarity=0.167  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcC------------------CCHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLL------------------EDEK   65 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~------------------~d~~   65 (231)
                      ..+|+|+|+ |-+|...++.+...|.+|++++|+...   .+.+..  .+.+++..++                  .+.+
T Consensus       184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~---l~~~~~--lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~  257 (381)
T 3p2y_A          184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEV---AEQVRS--VGAQWLDLGIDAAGEGGYARELSEAERAQQQQ  257 (381)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGG---HHHHHH--TTCEECCCC-------------CHHHHHHHHH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHH--cCCeEEeccccccccccchhhhhHHHHhhhHH
Confidence            568999998 999999999999999999999987532   222222  3444432221                  1245


Q ss_pred             HHHHHHccCCEEEE
Q 043777           66 SLLEAVKQVDVRFI   79 (231)
Q Consensus        66 ~l~~al~~~d~~f~   79 (231)
                      .+.++++++|+++.
T Consensus       258 ~l~e~l~~aDIVI~  271 (381)
T 3p2y_A          258 ALEDAITKFDIVIT  271 (381)
T ss_dssp             HHHHHHTTCSEEEE
T ss_pred             HHHHHHhcCCEEEE
Confidence            78889999999875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=95.12  E-value=0.021  Score=48.28  Aligned_cols=71  Identities=11%  Similarity=0.021  Sum_probs=46.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHH---HHHHHc--cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKS---LLEAVK--QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~---l~~al~--~~d~~f   78 (231)
                      ..+|+|+||+|.+|..+++.+...|++|++++|+..   +.+.++.+.  .. ...|..+.+.   +.+...  ++|+++
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~---~~~~~~~~g--~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK---KLQMAEKLG--AA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHHHT--CS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHcC--Cc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            568999999999999999999999999999988642   122223332  22 2346665433   333332  367666


Q ss_pred             Ec
Q 043777           79 IP   80 (231)
Q Consensus        79 ~p   80 (231)
                      ..
T Consensus       237 ~~  238 (354)
T 2j8z_A          237 DC  238 (354)
T ss_dssp             ES
T ss_pred             EC
Confidence            44

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=95.12  E-value=0.01  Score=50.43  Aligned_cols=32  Identities=13%  Similarity=0.141  Sum_probs=29.9

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|.|+|+ |.+|..++..|.+.|++|+++.|+.
T Consensus        17 kI~iIG~-G~mG~~la~~L~~~G~~V~~~~r~~   48 (366)
T 1evy_A           17 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNE   48 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence            8999997 9999999999999999999998864

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=95.12  E-value=0.012  Score=50.22  Aligned_cols=37  Identities=19%  Similarity=0.223  Sum_probs=26.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRD   37 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~   37 (231)
                      |+++++|.|.||||++|+.+++.|.+.. .++..+..+
T Consensus         4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpl_A            4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            4445689999999999999999776654 355555433

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=95.12  E-value=0.012  Score=50.22  Aligned_cols=37  Identities=19%  Similarity=0.223  Sum_probs=26.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRD   37 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~   37 (231)
                      |+++++|.|.||||++|+.+++.|.+.. .++..+..+
T Consensus         4 M~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpk_A            4 MRRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             --CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            4445689999999999999999776654 355555433

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=95.11  E-value=0.02  Score=46.07  Aligned_cols=36  Identities=14%  Similarity=0.188  Sum_probs=31.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC----CCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG----HPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g----~~v~~~~R~~   38 (231)
                      |. +|+|.|+|+ |.+|+.++..|.+.|    ++|.+++|+.
T Consensus         2 m~-~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~   41 (262)
T 2rcy_A            2 ME-NIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSK   41 (262)
T ss_dssp             CS-SSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred             CC-CCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence            55 578999998 999999999999999    7899998875

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.10  E-value=0.042  Score=48.41  Aligned_cols=72  Identities=22%  Similarity=0.272  Sum_probs=53.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      .++|+|.|| |.+|.++++.| +.+++|.++-++..   +++.+...-++..++.||-+|++-|.++ +.++|+....
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~---r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~  307 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQ---RAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIAL  307 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHH---HHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHH---HHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEc
Confidence            468999998 99999999987 55688998887642   2222222126788999999999988775 6678876543

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=95.06  E-value=0.017  Score=50.90  Aligned_cols=37  Identities=16%  Similarity=0.069  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~   38 (231)
                      |.++|+|.|+|+ |.+|..++..|.+.  |++|++++|+.
T Consensus         2 M~~~mkI~VIG~-G~mG~~lA~~La~~g~G~~V~~~d~~~   40 (467)
T 2q3e_A            2 MFEIKKICCIGA-GYVGGPTCSVIAHMCPEIRVTVVDVNE   40 (467)
T ss_dssp             CCCCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred             CCCccEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence            666689999996 99999999999998  79999998864

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=95.03  E-value=0.019  Score=48.81  Aligned_cols=33  Identities=27%  Similarity=0.309  Sum_probs=27.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~   37 (231)
                      ++|+|.||||.+|+.+++.|.+.+ .+++.+.|+
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            589999999999999999998765 577777653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=95.03  E-value=0.022  Score=48.07  Aligned_cols=34  Identities=18%  Similarity=0.151  Sum_probs=31.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      ++|+|+||+|.+|..+++.+...|+ +|++++|+.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~  196 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH  196 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH
Confidence            7899999999999999999999999 899988864

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=94.98  E-value=0.036  Score=46.61  Aligned_cols=71  Identities=17%  Similarity=0.127  Sum_probs=45.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCch-hhhhhhh---hcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNF-NFSLLRV---FHSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~-~~~~~~~---~~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      .+||.|+|| |.+|+.++..|+..|.  ++.+++++...-. .+..+.+   +...+.+...|       .++++++|++
T Consensus         9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aDiV   80 (326)
T 3vku_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDADLV   80 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCCEE
Confidence            579999997 9999999999999886  6888877532100 0101111   11234444332       2468999998


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      +++..
T Consensus        81 vi~ag   85 (326)
T 3vku_A           81 VITAG   85 (326)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            88643

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*

Probab=94.92  E-value=0.069  Score=46.49  Aligned_cols=70  Identities=14%  Similarity=0.243  Sum_probs=46.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEE------cCCCHHHHHHHHc--cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWG------LLEDEKSLLEAVK--QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~------D~~d~~~l~~al~--~~d   75 (231)
                      +++|||+|+ |.+|..+++.+.+.|+.++++..+.......   ..+ ..-.+..+      ++.|.+.+.++++  ++|
T Consensus         6 ~~kiLI~g~-g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~---~~~-ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d   80 (446)
T 3ouz_A            6 IKSILIANR-GEIALRALRTIKEMGKKAICVYSEADKDALY---LKY-ADASICIGKARSSESYLNIPAIIAAAEIAEAD   80 (446)
T ss_dssp             CCEEEECCC-HHHHHHHHHHHHHTTCEEEEEEEGGGTTCTH---HHH-SSEEEEEECCTTTTGGGCHHHHHHHHHHHTCS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCcccccch---Hhh-CCEEEEcCCCCccccccCHHHHHHHHHHhCcC
Confidence            579999996 8899999999999999999887543221100   011 11122222      6778888888776  477


Q ss_pred             EEE
Q 043777           76 VRF   78 (231)
Q Consensus        76 ~~f   78 (231)
                      +++
T Consensus        81 ~i~   83 (446)
T 3ouz_A           81 AIF   83 (446)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            755

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.91  E-value=0.03  Score=46.25  Aligned_cols=34  Identities=24%  Similarity=0.347  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++|.|+|+ |.+|..++..|.+.|++|++++|+.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~   48 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTE   48 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            468999998 9999999999999999999998874

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=94.90  E-value=0.01  Score=48.62  Aligned_cols=36  Identities=25%  Similarity=0.341  Sum_probs=28.0

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHh-CCCCEEEEEc
Q 043777            1 MAG-KSNVLVIGAIGRIGYHFTRRSIE-YGHPKFALIR   36 (231)
Q Consensus         1 M~~-~~~ilVtGatG~iG~~i~~~L~~-~g~~v~~~~R   36 (231)
                      |.+ +|+|+|+|++|.+|+.+++.+.+ .++++++..+
T Consensus         1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            563 47999999999999999999885 4677774443

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=94.85  E-value=0.057  Score=44.65  Aligned_cols=34  Identities=18%  Similarity=0.311  Sum_probs=27.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +||.++|- |..|..+++.|+++||+|+++.|+..
T Consensus         6 ~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~   39 (297)
T 4gbj_A            6 EKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTAS   39 (297)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEC-----
T ss_pred             CcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence            58999996 99999999999999999999999764

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=94.83  E-value=0.032  Score=46.40  Aligned_cols=70  Identities=17%  Similarity=0.148  Sum_probs=48.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ..+|+|+||+|.+|...+..+...|.+|++..++.    +.+.++.+.  +.. ..|..+.+.+.+.++++|++|-.
T Consensus       153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~----~~~~~~~lG--a~~-~i~~~~~~~~~~~~~g~D~v~d~  222 (321)
T 3tqh_A          153 GDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR----NHAFLKALG--AEQ-CINYHEEDFLLAISTPVDAVIDL  222 (321)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH----HHHHHHHHT--CSE-EEETTTSCHHHHCCSCEEEEEES
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc----hHHHHHHcC--CCE-EEeCCCcchhhhhccCCCEEEEC
Confidence            56899999999999999999999999988877532    122333333  222 24666655466777778877743

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=94.79  E-value=0.085  Score=44.74  Aligned_cols=71  Identities=13%  Similarity=0.155  Sum_probs=49.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhh-hhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLR-VFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~-~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      ..+|+|+|+ |.+|...++.+...|..|++++++...   .+... .+  +... ..|..+.+.+.++..++|++|-..
T Consensus       188 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~---~~~~~~~l--Ga~~-v~~~~~~~~~~~~~~~~D~vid~~  259 (366)
T 1yqd_A          188 GKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSK---KEEALKNF--GADS-FLVSRDQEQMQAAAGTLDGIIDTV  259 (366)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGG---HHHHHHTS--CCSE-EEETTCHHHHHHTTTCEEEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHHHHhc--CCce-EEeccCHHHHHHhhCCCCEEEECC
Confidence            568999996 999999999999999999888876431   11211 32  3322 247777777777766788877543

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=94.75  E-value=0.041  Score=44.28  Aligned_cols=68  Identities=18%  Similarity=0.231  Sum_probs=41.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEE-EEcCCCCc---hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFA-LIRDSASN---FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~-~~R~~~~~---~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      |. ++||+|+|+ |.+|+.+++.+.+.++++.. ++|+....   +....++.+. ++. +..|++.++.+.+.++
T Consensus         1 M~-MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~D-VvIDft~p~a~~~~~~   72 (243)
T 3qy9_A            1 MA-SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GAD-VAIDFSNPNLLFPLLD   72 (243)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCS-EEEECSCHHHHHHHHT
T ss_pred             CC-ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCC-EEEEeCChHHHHHHHH
Confidence            65 589999999 99999999999998776554 45543210   0000011111 223 3468888888776664

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=94.74  E-value=0.056  Score=45.44  Aligned_cols=70  Identities=13%  Similarity=0.092  Sum_probs=46.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHH---HHHHHHc--cCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK---SLLEAVK--QVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~---~l~~al~--~~d~~f~   79 (231)
                      ++++|+||+|.+|...++.+...|.+|++.+++..   +.+.++.+.  ... ..|..+.+   .+.+...  ++|++|-
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~---~~~~~~~~G--a~~-~~~~~~~~~~~~v~~~~~~~g~D~vid  239 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDE---QIALLKDIG--AAH-VLNEKAPDFEATLREVMKAEQPRIFLD  239 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGG---GHHHHHHHT--CSE-EEETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHHcC--CCE-EEECCcHHHHHHHHHHhcCCCCcEEEE
Confidence            68999999999999999999899999999987643   223333333  221 23554433   3333332  5888775


Q ss_pred             c
Q 043777           80 P   80 (231)
Q Consensus        80 p   80 (231)
                      .
T Consensus       240 ~  240 (349)
T 3pi7_A          240 A  240 (349)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}

Probab=94.74  E-value=0.13  Score=43.39  Aligned_cols=68  Identities=16%  Similarity=0.139  Sum_probs=50.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      +|+|+|+ |.+|+.+++++.+.|++++++..... .+ .   ..+ .. . +..|+.|.+.+.+++.++|.++...+
T Consensus         1 ~iliiG~-g~~g~~~~~a~~~~G~~v~~~~~~~~-~~-~---~~~-a~-~-~~~~~~d~~~l~~~~~~~d~v~~~~e   68 (369)
T 3aw8_A            1 MIGILGG-GQLGRMLALAGYPLGLSFRFLDPSPE-AC-A---GQV-GE-L-VVGEFLDEGALLRFAEGLALVTYEFE   68 (369)
T ss_dssp             CEEEECC-SHHHHHHHHHHTTBTCCEEEEESCTT-CG-G---GGT-SE-E-EECCTTCHHHHHHHHTTCSEEEECCT
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCC-Ch-H---HHh-hc-e-EecCCCCHHHHHHHHhCCCEEEECCC
Confidence            5899996 89999999999999999988875432 11 0   011 11 1 46799999999988888998875443

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=94.74  E-value=0.029  Score=47.09  Aligned_cols=73  Identities=10%  Similarity=0.007  Sum_probs=48.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHH---HHHHHHc--cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK---SLLEAVK--QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~---~l~~al~--~~d~~f   78 (231)
                      .++|+|+||+|.+|..+++.+...|++|++++|+..   +.+.+..+.  ... ..|+.+.+   .+.++..  ++|+++
T Consensus       167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~---~~~~~~~~g--a~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSED---KLRRAKALG--ADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHT--CSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH---HHHHHHhcC--CCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            578999999999999999999999999999888642   222233332  222 24776543   3333332  467777


Q ss_pred             Eccc
Q 043777           79 IPSE   82 (231)
Q Consensus        79 ~ps~   82 (231)
                      -...
T Consensus       241 ~~~g  244 (343)
T 2eih_A          241 DHTG  244 (343)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            5543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=94.74  E-value=0.038  Score=45.14  Aligned_cols=35  Identities=26%  Similarity=0.254  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      .++++|+|+ |..|+.++..|.+.|.+|++..|+..
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~  152 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSR  152 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            468999997 99999999999999988999999864

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.73  E-value=0.031  Score=46.15  Aligned_cols=34  Identities=18%  Similarity=0.315  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+|.|+|+ |.+|..++..|.+.|++|++++|+.
T Consensus         7 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~   40 (303)
T 3g0o_A            7 DFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNP   40 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH
Confidence            478999986 9999999999999999999998874

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=94.70  E-value=0.081  Score=45.74  Aligned_cols=70  Identities=16%  Similarity=0.106  Sum_probs=49.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEc----------------CCC----
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGL----------------LED----   63 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D----------------~~d----   63 (231)
                      ..+|+|+|+ |-+|...++.+...|.+|++++|+...   .+.+..  .+.+++..+                +++    
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~---l~~~~~--~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~  263 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAA---KEQVAS--LGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV  263 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTH---HHHHHH--TTCEECCCCC-----------------CHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHH--cCCceeecccccccccccccchhhhcchhhhh
Confidence            468999998 999999999999999999999887632   122222  233332221                222    


Q ss_pred             --HHHHHHHHccCCEEEE
Q 043777           64 --EKSLLEAVKQVDVRFI   79 (231)
Q Consensus        64 --~~~l~~al~~~d~~f~   79 (231)
                        .+.+.++++++|+++.
T Consensus       264 ~~~~~l~e~l~~aDVVI~  281 (405)
T 4dio_A          264 KQAALVAEHIAKQDIVIT  281 (405)
T ss_dssp             HHHHHHHHHHHTCSEEEE
T ss_pred             hhHhHHHHHhcCCCEEEE
Confidence              3578999999999875

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=94.69  E-value=0.032  Score=46.29  Aligned_cols=34  Identities=21%  Similarity=0.224  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~   38 (231)
                      +|||+|+|| |.+|..++..|...|+  +|++++|+.
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~   42 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAK   42 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence            479999998 9999999999999998  899998864

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=94.65  E-value=0.029  Score=45.05  Aligned_cols=65  Identities=11%  Similarity=0.098  Sum_probs=43.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhh-hhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLL-RVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~-~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ++|+|.|+|+ |.+|+.+++.|.+.|+.|.+++|+..   +.+.+ +.+  ++..    ..+   +.++++++|++++.
T Consensus         2 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~---~~~~~~~~~--g~~~----~~~---~~~~~~~~D~Vi~~   67 (259)
T 2ahr_A            2 NAMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLE---RSKEIAEQL--ALPY----AMS---HQDLIDQVDLVILG   67 (259)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHH---HHHHHHHHH--TCCB----CSS---HHHHHHTCSEEEEC
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHH---HHHHHHHHc--CCEe----eCC---HHHHHhcCCEEEEE
Confidence            3579999995 99999999999999999988887642   11111 111  2221    122   44566788988864

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=94.64  E-value=0.069  Score=44.12  Aligned_cols=34  Identities=18%  Similarity=0.213  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      ..+|+|.|+ |.+|+.+++.|...|. ++++++++.
T Consensus        36 ~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           36 TFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            468999998 8999999999999994 677776653

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=94.62  E-value=0.023  Score=50.83  Aligned_cols=34  Identities=29%  Similarity=0.322  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|+|| |++|+.++.+|.+.|++|++..|+.
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~  397 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTY  397 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            457999999 7999999999999999999999874

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=94.61  E-value=0.037  Score=44.23  Aligned_cols=64  Identities=17%  Similarity=0.194  Sum_probs=43.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC----CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH----PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~----~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+|.|+|+ |.+|+.+++.|.+.|+    +|.+.+|+..   +.+.+.. ..++..    .   .+..++++++|++++.
T Consensus         3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~---~~~~~~~-~~g~~~----~---~~~~e~~~~aDvVila   70 (247)
T 3gt0_A            3 KQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTA---NLKNASE-KYGLTT----T---TDNNEVAKNADILILS   70 (247)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHH---HHHHHHH-HHCCEE----C---SCHHHHHHHCSEEEEC
T ss_pred             CeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHH---HHHHHHH-HhCCEE----e---CChHHHHHhCCEEEEE
Confidence            78999995 9999999999999998    9999988642   1111111 013332    1   2234566778888764

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=94.58  E-value=0.035  Score=46.49  Aligned_cols=34  Identities=26%  Similarity=0.370  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .+||.|.|+ |.+|..++..|.++|++|+++.|+.
T Consensus        14 ~~kI~iIG~-G~mG~ala~~L~~~G~~V~~~~r~~   47 (335)
T 1z82_A           14 EMRFFVLGA-GSWGTVFAQMLHENGEEVILWARRK   47 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCcEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            479999997 9999999999999999999999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=94.58  E-value=0.12  Score=43.91  Aligned_cols=70  Identities=19%  Similarity=0.138  Sum_probs=44.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHH--ccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAV--KQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al--~~~d~~f~p   80 (231)
                      ..+|+|+||+|.+|...++.+...|..|++..+..    +.+.++.+  ++.. ..|..+.+...+..  .++|++|-.
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~----~~~~~~~l--Ga~~-v~~~~~~~~~~~~~~~~g~D~vid~  255 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQD----ASELVRKL--GADD-VIDYKSGSVEEQLKSLKPFDFILDN  255 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGG----GHHHHHHT--TCSE-EEETTSSCHHHHHHTSCCBSEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChH----HHHHHHHc--CCCE-EEECCchHHHHHHhhcCCCCEEEEC
Confidence            46899999999999999999888999888777431    22333333  3332 23665543333322  357877654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=94.57  E-value=0.043  Score=45.08  Aligned_cols=34  Identities=18%  Similarity=0.185  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      .++++|+|+ |.+|+.++..|.+.|. +|++..|+.
T Consensus       126 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~  160 (281)
T 3o8q_A          126 GATILLIGA-GGAARGVLKPLLDQQPASITVTNRTF  160 (281)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCH
Confidence            578999998 8999999999999996 899999974

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=94.55  E-value=0.03  Score=47.21  Aligned_cols=32  Identities=28%  Similarity=0.339  Sum_probs=26.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC---CCEEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG---HPKFALI   35 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g---~~v~~~~   35 (231)
                      +++|+|.||||.+|+.+++.|.+.+   .+++.+.
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~   37 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA   37 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence            5799999999999999999999874   4566665

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=94.54  E-value=0.029  Score=46.12  Aligned_cols=33  Identities=15%  Similarity=0.144  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|+|+ |.+|+.++.+|.+.| +|++..|+.
T Consensus       128 ~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~  160 (287)
T 1nvt_A          128 DKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTV  160 (287)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCH
Confidence            578999998 599999999999999 999988864

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=94.54  E-value=0.039  Score=47.09  Aligned_cols=27  Identities=30%  Similarity=0.406  Sum_probs=23.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP   30 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~   30 (231)
                      +++|.|.||||++|+.+++.|.+.+++
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p   28 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLP   28 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCC
Confidence            379999999999999999988887664

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=94.46  E-value=0.15  Score=43.04  Aligned_cols=33  Identities=27%  Similarity=0.452  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~   37 (231)
                      ..+|+|.|+ |++|+.+++.|...|. ++++++++
T Consensus        34 ~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           34 NTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            468999998 8999999999999995 57777664

>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*

Probab=94.45  E-value=0.056  Score=45.39  Aligned_cols=36  Identities=31%  Similarity=0.402  Sum_probs=31.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      |.+...|+|+|| |.+|..++.+|.++|++|+++.+.
T Consensus         3 m~~~~dVvVIG~-Gi~Gls~A~~La~~G~~V~vle~~   38 (363)
T 1c0p_A            3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (363)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCCEEEECC-CHHHHHHHHHHHhCCCEEEEEecc
Confidence            444568999998 999999999999999999999885

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=94.42  E-value=0.044  Score=48.46  Aligned_cols=35  Identities=17%  Similarity=0.151  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .+++++|+|+ |.||+.+++.|...|.+|++..|+.
T Consensus       264 ~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~  298 (488)
T 3ond_A          264 AGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDP  298 (488)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            4689999998 6999999999999999998887753

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=94.42  E-value=0.022  Score=46.99  Aligned_cols=35  Identities=20%  Similarity=0.185  Sum_probs=29.4

Q ss_pred             CCC-CCeEEEEcCCChhHHHHHHHHHhC-----C-CCEEEEEc
Q 043777            1 MAG-KSNVLVIGAIGRIGYHFTRRSIEY-----G-HPKFALIR   36 (231)
Q Consensus         1 M~~-~~~ilVtGatG~iG~~i~~~L~~~-----g-~~v~~~~R   36 (231)
                      |++ +|+|.|.|+ |.+|..++..|.+.     | ++|+++.|
T Consensus         4 m~~~~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~~V~~~~r   45 (317)
T 2qyt_A            4 MNQQPIKIAVFGL-GGVGGYYGAMLALRAAATDGLLEVSWIAR   45 (317)
T ss_dssp             ---CCEEEEEECC-SHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence            444 368999996 99999999999998     9 99999988

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=94.40  E-value=0.036  Score=49.09  Aligned_cols=36  Identities=19%  Similarity=0.239  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+ +++|.|+|+ |.+|+.++..|.+.|++|.+..|+.
T Consensus        13 ~~-~~~IgvIGl-G~MG~~lA~~La~~G~~V~v~~r~~   48 (480)
T 2zyd_A           13 MS-KQQIGVVGM-AVMGRNLALNIESRGYTVSIFNRSR   48 (480)
T ss_dssp             ---CBSEEEECC-SHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred             cC-CCeEEEEcc-HHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            55 678999997 9999999999999999999998874

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=94.37  E-value=0.09  Score=45.83  Aligned_cols=65  Identities=15%  Similarity=0.151  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      ..++|+|.|. |.||+.+++.|...|.+|++..+++.   +.  ......++...        ++.++++++|+++..+
T Consensus       210 ~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~---~a--~~A~~~G~~~~--------sL~eal~~ADVVilt~  274 (436)
T 3h9u_A          210 AGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPI---NA--LQAAMEGYQVL--------LVEDVVEEAHIFVTTT  274 (436)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH---HH--HHHHHTTCEEC--------CHHHHTTTCSEEEECS
T ss_pred             cCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChh---hh--HHHHHhCCeec--------CHHHHHhhCCEEEECC
Confidence            4689999996 99999999999999999988877531   11  11111444331        4788899999987643

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=94.35  E-value=0.042  Score=44.60  Aligned_cols=33  Identities=24%  Similarity=0.332  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~   33 (279)
T 2f1k_A            1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQ   33 (279)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            57999995 9999999999999999999888764

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=94.33  E-value=0.044  Score=46.24  Aligned_cols=35  Identities=20%  Similarity=0.314  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..+|+|+||+|.+|..+++.+...|.+|++++|+.
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~  202 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST  202 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            56899999999999999999999999999998864

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=94.31  E-value=0.049  Score=44.54  Aligned_cols=34  Identities=24%  Similarity=0.190  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      .++++|+|+ |.+|+.++.+|.+.|. +|++..|+.
T Consensus       120 ~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~  154 (272)
T 3pwz_A          120 NRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDM  154 (272)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence            578999998 8999999999999995 899998874

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=94.30  E-value=0.15  Score=45.12  Aligned_cols=34  Identities=18%  Similarity=0.279  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+|.|+|+ |.+|+.++..|.+.|++|.+..|+.
T Consensus         2 ~m~IgvIG~-G~mG~~lA~~La~~G~~V~v~dr~~   35 (482)
T 2pgd_A            2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTV   35 (482)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSST
T ss_pred             CCeEEEECh-HHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            468999996 9999999999999999999998875

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=94.28  E-value=0.067  Score=46.20  Aligned_cols=68  Identities=22%  Similarity=0.295  Sum_probs=48.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhh-hhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNF-SLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~-~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .++|+|+|+ |.+|+.+++.|...|. +|++..|+..   +. +....+  ++..  .   +.+++.+++.++|+++...
T Consensus       167 g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~---ra~~la~~~--g~~~--~---~~~~l~~~l~~aDvVi~at  235 (404)
T 1gpj_A          167 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYE---RAVELARDL--GGEA--V---RFDELVDHLARSDVVVSAT  235 (404)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHH---HHHHHHHHH--TCEE--C---CGGGHHHHHHTCSEEEECC
T ss_pred             CCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHH---HHHHHHHHc--CCce--e---cHHhHHHHhcCCCEEEEcc
Confidence            679999998 9999999999999998 7888888642   11 222222  3332  1   2345777788999988764


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus       236 ~  236 (404)
T 1gpj_A          236 A  236 (404)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=94.27  E-value=0.065  Score=44.39  Aligned_cols=59  Identities=15%  Similarity=0.137  Sum_probs=45.3

Q ss_pred             ceeechhHHHHHHHhhcCccccCceEEEeeeeeeeeecCCCCcccccccCCcccccccccccccCCCCCccCHHHHHHHH
Q 043777           87 VFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVPRGNIYSFNDLVSLW  166 (231)
Q Consensus        87 ~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~el~~~~  166 (231)
                      .+++.+|++...+.++.++.. ++.+++.                                     +++ +|+.|+++.+
T Consensus       215 ~~i~v~Dva~~~~~~~~~~~~-g~~~~v~-------------------------------------~~~-~s~~e~~~~i  255 (342)
T 2x4g_A          215 NVIDAAEAGRGLLMALERGRI-GERYLLT-------------------------------------GHN-LEMADLTRRI  255 (342)
T ss_dssp             EEEEHHHHHHHHHHHHHHSCT-TCEEEEC-------------------------------------CEE-EEHHHHHHHH
T ss_pred             ceeeHHHHHHHHHHHHhCCCC-CceEEEc-------------------------------------CCc-ccHHHHHHHH
Confidence            467888888887777765443 5566553                                     356 9999999999


Q ss_pred             HHHcCCcceEEeecHHHHH
Q 043777          167 EEKIGKALDRVYVAEDQLL  185 (231)
Q Consensus       167 ~~~~G~~~~~~~~~~~~~~  185 (231)
                      .+.+|++..+ ++|.+.+.
T Consensus       256 ~~~~g~~~~~-~~p~~~~~  273 (342)
T 2x4g_A          256 AELLGQPAPQ-PMSMAMAR  273 (342)
T ss_dssp             HHHHTCCCCE-EECHHHHH
T ss_pred             HHHhCCCCCC-cCCHHHHH
Confidence            9999999988 88887554

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=94.24  E-value=0.037  Score=46.73  Aligned_cols=35  Identities=23%  Similarity=0.177  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~   38 (231)
                      +++|.|.||||.+|+.+++.|.+. .+++..+.++.
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~   39 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA   39 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence            468999999999999999999884 46777665443

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=94.21  E-value=0.023  Score=47.80  Aligned_cols=35  Identities=11%  Similarity=0.152  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCC-------CCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYG-------HPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g-------~~v~~~~R~~~   39 (231)
                      +|+|.|+|+ |.+|..++..|.+.|       ++|+++.|+..
T Consensus         8 ~mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~   49 (354)
T 1x0v_A            8 SKKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED   49 (354)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence            579999997 999999999999999       89999999764

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=94.20  E-value=0.04  Score=48.78  Aligned_cols=36  Identities=17%  Similarity=0.174  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhC-CC-CEEEEEcCCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEY-GH-PKFALIRDSA   39 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~-g~-~v~~~~R~~~   39 (231)
                      +.|+|.|+|+ |.+|..++..|.+. |+ +|++++|+..
T Consensus        17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            4689999997 99999999999999 99 9999999865

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.18  E-value=0.23  Score=39.88  Aligned_cols=75  Identities=21%  Similarity=0.119  Sum_probs=47.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCC----------------chhhh----hhhhhcCCcEEEEE--c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSAS----------------NFNFS----LLRVFHSGVFDYWG--L   60 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~----------------~~~~~----~~~~~~~~v~~~~~--D   60 (231)
                      ..+|+|.|+ |.+|+.+++.|...|. .+++++++.-.                .+|++    .+..+.+.+.+...  +
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  106 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR  106 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            468999998 7799999999999996 56676554210                01111    11222244544333  3


Q ss_pred             CCCHHHHHHHHccCCEEEEc
Q 043777           61 LEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus        61 ~~d~~~l~~al~~~d~~f~p   80 (231)
                      + +.+.+.+.++++|+++..
T Consensus       107 ~-~~~~~~~~~~~~DvVi~~  125 (251)
T 1zud_1          107 L-TGEALKDAVARADVVLDC  125 (251)
T ss_dssp             C-CHHHHHHHHHHCSEEEEC
T ss_pred             C-CHHHHHHHHhcCCEEEEC
Confidence            3 456778888899987754

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=94.15  E-value=0.051  Score=48.16  Aligned_cols=37  Identities=24%  Similarity=0.354  Sum_probs=31.6

Q ss_pred             CC-CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MA-GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~-~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+ +.++|.|+|+ |.+|..|+..|++.|++|++.+|+.
T Consensus         1 Msm~~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~   38 (483)
T 3mog_A            1 MSLNVQTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISA   38 (483)
T ss_dssp             ---CCCCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCH
Confidence            54 3568999997 9999999999999999999998875

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=94.12  E-value=0.059  Score=44.67  Aligned_cols=34  Identities=15%  Similarity=0.160  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++||.++|= |..|+.+++.|+++||+|+++.|+.
T Consensus         3 M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~   36 (300)
T 3obb_A            3 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQ   36 (300)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             cCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCH
Confidence            458999995 9999999999999999999999875

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=94.06  E-value=0.036  Score=45.38  Aligned_cols=37  Identities=22%  Similarity=0.340  Sum_probs=28.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhC-CCCEEE-EEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEY-GHPKFA-LIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~-~~R~~   38 (231)
                      |+ ++||+|+||+|.+|+.+++.+.+. ++++.. ++|+.
T Consensus         5 M~-mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            5 MS-SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             -C-CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             cc-ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            55 579999999999999999999876 466665 45543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=94.06  E-value=0.12  Score=44.56  Aligned_cols=71  Identities=18%  Similarity=0.127  Sum_probs=48.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCC-------------CH------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLE-------------DE------   64 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~-------------d~------   64 (231)
                      ..+|+|+|+ |.+|..+++.+...|..|++++|+...   .+.++.  .+..++..|..             +.      
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~---~~~~~~--lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  245 (401)
T 1x13_A          172 PAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEV---KEQVQS--MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAE  245 (401)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGG---HHHHHH--TTCEECCC--------CCHHHHHHSHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH---HHHHHH--cCCEEEEecccccccccccchhhccHHHHHHH
Confidence            578999997 999999999999999999988886531   122222  34444322221             11      


Q ss_pred             -HHHHHHHccCCEEEEc
Q 043777           65 -KSLLEAVKQVDVRFIP   80 (231)
Q Consensus        65 -~~l~~al~~~d~~f~p   80 (231)
                       +.+.++++++|+++..
T Consensus       246 ~~~l~e~~~~aDvVI~~  262 (401)
T 1x13_A          246 MELFAAQAKEVDIIVTT  262 (401)
T ss_dssp             HHHHHHHHHHCSEEEEC
T ss_pred             HHHHHHHhCCCCEEEEC
Confidence             2477888899998865

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=94.06  E-value=0.043  Score=46.49  Aligned_cols=35  Identities=20%  Similarity=0.117  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..+|+|+||+|.+|..+++.+...|+.|++++|+.
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~  198 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD  198 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH
Confidence            56899999999999999999999999999988863

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=94.06  E-value=0.06  Score=44.98  Aligned_cols=33  Identities=21%  Similarity=0.069  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~   37 (231)
                      .++|.|+|+ |.+|..++..|...|+ +|++++++
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~   41 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIP   41 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEecc
Confidence            468999997 9999999999999998 89998887

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=94.05  E-value=0.1  Score=43.83  Aligned_cols=33  Identities=24%  Similarity=0.311  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      ..+|+|+||+|.+|...++.+...|.+|+++ ++
T Consensus       151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~  183 (343)
T 3gaz_A          151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-AR  183 (343)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC
Confidence            5689999999999999999999999988877 54

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=94.03  E-value=0.074  Score=44.79  Aligned_cols=59  Identities=22%  Similarity=0.296  Sum_probs=44.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|.|+|. |.+|+.+++.|...|++|.+..|+...   .       .++..       ..++.++++++|++++.
T Consensus       164 g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~dr~~~~---~-------~g~~~-------~~~l~ell~~aDvVil~  222 (333)
T 3ba1_A          164 GKRVGIIGL-GRIGLAVAERAEAFDCPISYFSRSKKP---N-------TNYTY-------YGSVVELASNSDILVVA  222 (333)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCCEEEECSSCCT---T-------CCSEE-------ESCHHHHHHTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCchh---c-------cCcee-------cCCHHHHHhcCCEEEEe
Confidence            578999997 999999999999999999998886521   0       12221       12456788899998763

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.02  E-value=0.042  Score=44.26  Aligned_cols=34  Identities=18%  Similarity=0.345  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~   38 (231)
                      +|+|.|+|+ |.+|+.++..|.+.|++ |.+++|+.
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~   44 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTE   44 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence            478999997 99999999999999999 77887764

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=94.00  E-value=0.085  Score=43.93  Aligned_cols=57  Identities=25%  Similarity=0.310  Sum_probs=43.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|.|.|. |.||+.+++.|...|++|.+..|+...   .       .      .+   ..++.++++++|++++.
T Consensus       144 g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~---~-------~------~~---~~~l~ell~~aDvV~l~  200 (311)
T 2cuk_A          144 GLTLGLVGM-GRIGQAVAKRALAFGMRVVYHARTPKP---L-------P------YP---FLSLEELLKEADVVSLH  200 (311)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS---S-------S------SC---BCCHHHHHHHCSEEEEC
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHCCCEEEEECCCCcc---c-------c------cc---cCCHHHHHhhCCEEEEe
Confidence            578999996 999999999999999999988886521   0       1      12   23466788889987763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	231
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-17
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-17
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	6e-05
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-06
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	7e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	0.002
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.003

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 77.9 bits (190), Expect = 1e-17
 Identities = 61/152 (40%), Positives = 78/152 (51%), Gaps = 50/152 (32%)

Query: 93  DVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYTTISDYLDTSVP 152
           D+  FTI A+DDPRTLNK L+L                                      
Sbjct: 193 DIGTFTIKAVDDPRTLNKTLYL------------------------------------RL 216

Query: 153 RGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKAR-------------VLGDQT 199
             N  S N+LV+LWE+KI K L++ YV E+++LK I +                V GDQT
Sbjct: 217 PANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQT 276

Query: 200 NFEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
           NFEI P+ GVEA++LYPDV YTTVDEYL+ F+
Sbjct: 277 NFEIGPA-GVEASQLYPDVKYTTVDEYLSNFV 307

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 42.5 bits (98), Expect = 2e-05
 Identities = 19/49 (38%), Positives = 31/49 (63%)

Query: 4  KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHS 52
          +S +L+IGA G IG H  + S++ GHP F L+R+S ++ N    ++  S
Sbjct: 3  RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLES 51

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 77.1 bits (188), Expect = 3e-17
 Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 14/91 (15%)

Query: 154 GNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEK-------------ARVLGDQTN 200
            NI S  +++ +WE    + LD++Y++    L ++++K                 GD  N
Sbjct: 223 MNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYN 282

Query: 201 FEIEPSFGVEATELYPDVNYTTVDEYLNQFI 231
           FEI P+  +EAT+LYP+V Y T+D YL +++
Sbjct: 283 FEIGPN-AIEATKLYPEVKYVTMDSYLERYV 312

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 40.9 bits (94), Expect = 6e-05
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 4  KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN 41
          KS VL++G  G IG      SI  GHP + L R    +
Sbjct: 3  KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVS 40

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 3/90 (3%)

Query: 4  KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLED 63
          K  + V+GA GR G    R +   GH   A +          L       V  + G L +
Sbjct: 3  KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA--IPNVTLFQGPLLN 60

Query: 64 EKSLLE-AVKQVDVRFIPSEYGAGVFVKDT 92
             L++   +   + FI +   AG  +   
Sbjct: 61 NVPLMDTLFEGAHLAFINTTSQAGDEIAIG 90

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 1e-05
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 1  MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYW 58
          MA K  + + GA G+ G     ++++ G+    L+RDS+   +               
Sbjct: 1  MAVK-KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQ 57

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 37.5 bits (85), Expect = 7e-04
 Identities = 10/62 (16%), Positives = 17/62 (27%)

Query: 6  NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK 65
           V V G  G  G   +      G         + +  +         G+    G + D+ 
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 66 SL 67
           L
Sbjct: 70 KL 71

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 35.9 bits (81), Expect = 0.002
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 7  VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLL 47
          VLV GA G +  H   + +E+G+      R ++   N    
Sbjct: 14 VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR 54

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 2/76 (2%)

Query: 6  NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLED 63
           +L+ G  G IG    R  I+        I       N   L      +        + D
Sbjct: 2  KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 64 EKSLLEAVKQVDVRFI 79
             +    +Q     +
Sbjct: 62 SAEITRIFEQYQPDAV 77

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	231
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.73
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.63
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.58
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.58
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.54
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.53
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.52
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.51
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.5
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.43
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.35
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.34
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.33
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.32
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.3
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.27
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.27
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.23
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.22
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.21
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.2
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.18
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.15
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.06
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.89
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.82
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.8
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.79
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.78
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.77
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.76
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.74
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.74
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.74
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.73
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.73
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.73
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.73
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.72
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.72
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.72
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.71
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.71
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	98.71
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.7
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.69
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.69
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.69
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.69
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.68
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.68
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.68
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.67
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.67
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.66
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.66
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.66
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.65
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.64
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.64
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.63
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.63
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.62
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.62
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.61
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.59
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.57
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.57
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.57
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.56
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.56
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	98.55
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	98.52
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.5
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.49
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.48
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	98.44
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.43
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.43
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.43
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.42
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.4
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.4
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.38
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	98.32
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.28
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.27
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.25
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.1
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.01
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.97
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.97
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.96
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	97.91
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	97.9
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.84
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.76
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.5
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.36
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.31
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.29
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.29
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.26
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.19
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.15
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.04
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.96
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.95
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.87
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.84
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.83
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.81
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.75
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.7
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.69
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.68
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.67
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.65
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.63
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.6
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.59
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.58
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.55
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.51
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.46
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	96.44
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.38
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.37
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.36
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.33
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.3
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.28
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.25
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.24
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.17
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.13
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.02
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.01
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.0
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.94
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.93
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	95.9
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	95.89
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.87
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	95.8
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.74
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	95.73
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.71
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.7
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.69
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.65
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	95.64
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	95.64
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	95.63
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	95.63
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.63
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.6
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.58
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.57
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	95.54
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	95.42
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.39
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.37
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.37
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.35
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.23
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	95.2
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.17
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.15
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.07
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.06
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.06
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.03
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.0
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	94.97
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.89
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.89
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.79
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.76
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.65
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.48
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	94.41
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.4
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	94.39
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	94.39
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.26
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.21
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.16
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.94
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	93.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	93.91
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.87
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.84
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.8
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.79
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	93.74
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	93.72
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.68
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	93.48
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.44
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.39
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.38
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.35
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.2
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	93.18
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	93.16
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	93.05
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.95
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.91
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.79
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	92.78
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	92.73
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.73
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.51
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.51
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	92.24
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	92.21
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	92.19
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.02
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	91.96
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.95
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.88
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.8
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	91.79
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.55
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	91.52
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	91.43
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	91.33
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	91.25
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	91.07
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	91.06
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	91.0
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	90.97
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	90.69
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.52
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.27
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	90.14
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	90.08
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	90.07
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	90.04
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.01
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	89.84
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	89.72
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	89.08
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	88.89
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	88.7
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	88.68
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	88.45
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	88.45
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	88.37
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	88.23
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.21
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	87.83
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.83
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	87.16
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	87.14
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	86.56
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.55
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	86.4
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	86.25
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	86.22
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	85.56
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	85.25
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	85.07
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	85.05
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	84.89
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.65
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.59
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	84.35
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	84.08
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	83.82
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.78
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.35
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	83.3
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	83.0
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	82.9
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.86
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	82.85
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.39
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	82.25
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	82.11
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	82.09
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	81.98
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	81.8
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	81.8
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.67
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	81.6
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.38
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	81.33
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	81.14
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	80.94
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	80.88
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	80.88
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	80.84
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	80.71
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	80.01

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=3e-27  Score=196.09  Aligned_cols=192  Identities=40%  Similarity=0.745  Sum_probs=140.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEE--
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVR--   77 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~--   77 (231)
                      +++|||||||||+||++++++|+++||+|++++|+.....  +.+....+. .+++++.+|++|.+.+.+++++++..  
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            3678999999999999999999999999999999765421  233333444 78999999999999999999998773  


Q ss_pred             -----------------------------EEcccCCC-------------------------------------------
Q 043777           78 -----------------------------FIPSEYGA-------------------------------------------   85 (231)
Q Consensus        78 -----------------------------f~ps~~g~-------------------------------------------   85 (231)
                                                   +++|.+|.                                           
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~g  161 (312)
T d1qyda_          82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAG  161 (312)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEHH
T ss_pred             hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceeec
Confidence                                         33444432                                           


Q ss_pred             -----------------------------cceeechhHHHHHHHhhcCccccCceEEEeeeeeeeeecCCCCcccccccC
Q 043777           86 -----------------------------GVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYP  136 (231)
Q Consensus        86 -----------------------------~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  136 (231)
                                                   ..+++.+|++++.+.++.+++..++.++..                     
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~---------------------  220 (312)
T d1qyda_         162 YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIR---------------------  220 (312)
T ss_dssp             HHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECC---------------------
T ss_pred             CCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEe---------------------
Confidence                                         123444555555555554444444433321                     


Q ss_pred             CcccccccccccccCCCCCccCHHHHHHHHHHHcCCcceEEeecHHHHHHhhhhc-------------eeeecceeeeec
Q 043777          137 HLKYTTISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEK-------------ARVLGDQTNFEI  203 (231)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~lt~~el~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~  203 (231)
                                     .+++.+|++|+++.+++++|+++++.++|.+++.+.+...             .+..|+...+.+
T Consensus       221 ---------------~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (312)
T d1qyda_         221 ---------------PPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFEI  285 (312)
T ss_dssp             ---------------CGGGEEEHHHHHHHHHHHHTCCCEECCBCSHHHHHHHTTSCTTHHHHTTTHHHHTTSCTTTSSCC
T ss_pred             ---------------CCCcCCCHHHHHHHHHHHHCCCCeEEECCHHHHHHHHHhcCCcHhHHHHHHHHHHhcCccccccc
Confidence                           3467899999999999999999999999999887765433             234445444554


Q ss_pred             CCCccccccccCCCCcccCHHHHHhhhC
Q 043777          204 EPSFGVEATELYPDVNYTTVDEYLNQFI  231 (231)
Q Consensus       204 ~~~~~~~~~~~~p~~~~~~~~~~l~~~~  231 (231)
                      .+. ..+.+++|||+++||++|||++|+
T Consensus       286 ~~~-~~ea~~l~Pd~~~tt~~e~l~~~v  312 (312)
T d1qyda_         286 GPN-AIEATKLYPEVKYVTMDSYLERYV  312 (312)
T ss_dssp             CSS-EEEHHHHCTTSCCCCHHHHHTTTC
T ss_pred             Ccc-hhhHHHhCCCCCcCcHHHHHHhhC
Confidence            432 457789999999999999999986

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=1.1e-26  Score=191.38  Aligned_cols=192  Identities=54%  Similarity=0.871  Sum_probs=139.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch---hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF---NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~---~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      ++|||||||||||||++++++|+++|++|++++|+.....   +...+..+. .++.++.+|+.+...+.+++++++.++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            3789999999999999999999999999999999865422   222333444 688999999999999999999988744


Q ss_pred             E---------------------------cccCCC----------------------------------------------
Q 043777           79 I---------------------------PSEYGA----------------------------------------------   85 (231)
Q Consensus        79 ~---------------------------ps~~g~----------------------------------------------   85 (231)
                      +                           .|.++.                                              
T Consensus        82 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~  161 (307)
T d1qyca_          82 STVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLR  161 (307)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEHHHHTT
T ss_pred             ecccccccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhccCCCceecccceecCCCcc
Confidence            3                           222221                                              


Q ss_pred             ------------------------cceeechhHHHHHHHhhcCccccCceEEEeeeeeeeeecCCCCcccccccCCcccc
Q 043777           86 ------------------------GVFVKDTDVAAFTINALDDPRTLNKLLHLREISHTFNMESSGELDGTKLYPHLKYT  141 (231)
Q Consensus        86 ------------------------~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  141 (231)
                                              ..|++.+|++.+.+.++.++...++.++..                          
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~--------------------------  215 (307)
T d1qyca_         162 SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLR--------------------------  215 (307)
T ss_dssp             TTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECC--------------------------
T ss_pred             chhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEe--------------------------
Confidence                                    123344444444444444443333333221                          


Q ss_pred             cccccccccCCCCCccCHHHHHHHHHHHcCCcceEEeecHHHHHHhhhhc-------------eeeecceeeeecCCCcc
Q 043777          142 TISDYLDTSVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEK-------------ARVLGDQTNFEIEPSFG  208 (231)
Q Consensus       142 ~~~~~~~~~~~~~~~lt~~el~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~~~~~~  208 (231)
                                .+++.+|+.|+++.+++++|+++++.++|.+++.+.+...             .+..+++..+.+.+. +
T Consensus       216 ----------~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  284 (307)
T d1qyca_         216 ----------LPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPA-G  284 (307)
T ss_dssp             ----------CGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHHHHHHHTSCTTHHHHHHHHHHHHTTCTTTSSCCCTT-E
T ss_pred             ----------CCCCccCHHHHHHHHHHHHCCCCcEEECCHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccCcc-h
Confidence                      3468899999999999999999999999999998876543             234455555555432 5


Q ss_pred             ccccccCCCCcccCHHHHHhhhC
Q 043777          209 VEATELYPDVNYTTVDEYLNQFI  231 (231)
Q Consensus       209 ~~~~~~~p~~~~~~~~~~l~~~~  231 (231)
                      .+++++|||++++|+||||++++
T Consensus       285 ~~~~~l~P~~~~~t~ee~l~~~v  307 (307)
T d1qyca_         285 VEASQLYPDVKYTTVDEYLSNFV  307 (307)
T ss_dssp             EEHHHHCTTCCCCCHHHHHHTTC
T ss_pred             hhHHHhCCCCCcCcHHHHHHHhC
Confidence            67889999999999999999986

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.73  E-value=1.3e-17  Score=140.68  Aligned_cols=75  Identities=23%  Similarity=0.271  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCH-HHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE-KSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~l~~al~~~d~~f~   79 (231)
                      ++|+|+||||||+||++++++|+++||+|++++|+.+. .....+.. ..+++++.+|+.|. +.+..++++++..|+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~-~~~~~~~~-~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~   77 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG-LIAEELQA-IPNVTLFQGPLLNNVPLMDTLFEGAHLAFI   77 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS-HHHHHHHT-STTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch-hhhhhhcc-cCCCEEEEeeCCCcHHHHHHHhcCCceEEe
Confidence            47899999999999999999999999999999998653 11111111 16899999999885 457788899998665

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.5e-15  Score=117.53  Aligned_cols=72  Identities=19%  Similarity=0.214  Sum_probs=62.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      |. ++||+||||||+||++++++|+++||+|++++|+.+..      +... .+++++.+|++|.+++.++++++|++++
T Consensus         1 m~-~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~------~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~   73 (205)
T d1hdoa_           1 MA-VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL------PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (205)
T ss_dssp             CC-CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS------CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CC-CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhc------ccccccccccccccccchhhHHHHhcCCCEEEE
Confidence            67 67899999999999999999999999999999986421      1222 7789999999999999999999998665

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=8.1e-15  Score=115.59  Aligned_cols=71  Identities=24%  Similarity=0.245  Sum_probs=58.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEE--EEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKF--ALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~--~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ++++||||||||+||++++++|+++|+++.  .+.|+++      ....+..+++++.+|+++.+.+.++++++|.+++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~   74 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ------GKEKIGGEADVFIGDITDADSINPAFQGIDALVI   74 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH------HHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH------HHHhccCCcEEEEeeeccccccccccccceeeEE
Confidence            467999999999999999999999998754  4566532      1123347789999999999999999999999775

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=2.9e-14  Score=120.32  Aligned_cols=76  Identities=20%  Similarity=0.035  Sum_probs=62.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+++|||||||||||||++|+++|+++||+|++++|......     .......++..+|+++.+.+.++++++|.+++.
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~   86 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-----TEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNL   86 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-----CGGGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-----hhhcccCcEEEeechhHHHHHHHhhcCCeEeec
Confidence            788999999999999999999999999999999987653211     111155678889999999999999999997764


Q ss_pred             c
Q 043777           81 S   81 (231)
Q Consensus        81 s   81 (231)
                      .
T Consensus        87 a   87 (363)
T d2c5aa1          87 A   87 (363)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.54  E-value=5.5e-14  Score=116.62  Aligned_cols=75  Identities=13%  Similarity=0.155  Sum_probs=58.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccC--CEEEEcc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQV--DVRFIPS   81 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~--d~~f~ps   81 (231)
                      ||||||||||||++|+++|+++|++|++++|-..... ...+..+.  .+++++.+|++|.+.+.++++++  |++||-+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~-~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA-TDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH-HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc-hhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            7999999999999999999999999999875332211 11112222  68899999999999999999874  8887744

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=9.1e-15  Score=122.38  Aligned_cols=73  Identities=26%  Similarity=0.286  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHH-HHccCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLE-AVKQVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~-al~~~d~~f~ps   81 (231)
                      |||||||||||||++++++|+++|+ +|+++++....  ..   +... .+++++.+|+++.+.+.+ +++++|+++|-.
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~--~~---~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a   75 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA--IS---RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG--GG---GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc--hh---hhccCCCeEEEECccCChHHHHHHHHhCCCcccccc
Confidence            6899999999999999999999995 78888875421  11   1122 778999999998766554 777899988744


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        76 ~   76 (342)
T d2blla1          76 A   76 (342)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=3.1e-13  Score=113.16  Aligned_cols=74  Identities=22%  Similarity=0.131  Sum_probs=58.0

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC------ch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS------NF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~------~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~   72 (231)
                      |+  +||||||||||||++|+++|+++|++|++++|....      .+ ..+....+. .++.++.+|++|.+.+.+++.
T Consensus         1 M~--kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   78 (346)
T d1ek6a_           1 MA--EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFK   78 (346)
T ss_dssp             CC--SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CC--CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccc
Confidence            66  799999999999999999999999999999763221      11 112222333 778999999999999999998


Q ss_pred             cCCE
Q 043777           73 QVDV   76 (231)
Q Consensus        73 ~~d~   76 (231)
                      +.+.
T Consensus        79 ~~~~   82 (346)
T d1ek6a_          79 KYSF   82 (346)
T ss_dssp             HCCE
T ss_pred             cccc
Confidence            8664

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=2.3e-13  Score=113.84  Aligned_cols=78  Identities=21%  Similarity=0.188  Sum_probs=61.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc--cCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK--QVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~--~~d~~f~p   80 (231)
                      |||||||||||||++|++.|+++|++|++++|...... .....+... .++.++++|++|.+.+.++++  ++|++||-
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            68999999999999999999999999999987543211 111122233 689999999999999999998  68998875


Q ss_pred             cc
Q 043777           81 SE   82 (231)
Q Consensus        81 s~   82 (231)
                      +.
T Consensus        81 Aa   82 (338)
T d1udca_          81 AG   82 (338)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.50  E-value=3.3e-14  Score=115.28  Aligned_cols=70  Identities=10%  Similarity=0.067  Sum_probs=48.4

Q ss_pred             cCCCCCccCHHHHHHHHHHHcCCcceEEeecHHHHHHhhhhceeeecceeee-ecCCCccccccccCCCCcccCHHHHHh
Q 043777          150 SVPRGNIYSFNDLVSLWEEKIGKALDRVYVAEDQLLKNIQEKARVLGDQTNF-EIEPSFGVEATELYPDVNYTTVDEYLN  228 (231)
Q Consensus       150 ~~~~~~~lt~~el~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~l~  228 (231)
                      ....++.+|+.|++..+.+.+|++..+.+++.+++-...        ....+ .+.   +..+.+.+ ++++.+++|-|+
T Consensus       206 ~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a--------~rp~~~~ld---~~k~~~~~-g~~~~~~~~~l~  273 (281)
T d1vl0a_         206 HCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPA--------KRPKYSVLR---NYMLELTT-GDITREWKESLK  273 (281)
T ss_dssp             ECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSS--------CCCSBCCBC---CHHHHHTT-CCCCCBHHHHHH
T ss_pred             eEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcC--------CCccccccC---HHHHHHHh-CCCCCCHHHHHH
Confidence            345678899999999999999999999998865431110        00001 011   34567778 888888888888


Q ss_pred             hhC
Q 043777          229 QFI  231 (231)
Q Consensus       229 ~~~  231 (231)
                      ++|
T Consensus       274 ~~l  276 (281)
T d1vl0a_         274 EYI  276 (281)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.43  E-value=7.2e-13  Score=110.98  Aligned_cols=77  Identities=18%  Similarity=0.122  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +|+|||||||||||++|+++|++.|+.|.++.|+..... .......+. .++.++.+|++|.+.+..++++++.+++.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            579999999999999999999999999887777532211 111222333 78999999999999999999999887664

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.35  E-value=7.8e-12  Score=106.23  Aligned_cols=78  Identities=19%  Similarity=0.115  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc------------CC-CC-chhhhh---hhhhc-CCcEEEEEcCCCHH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR------------DS-AS-NFNFSL---LRVFH-SGVFDYWGLLEDEK   65 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R------------~~-~~-~~~~~~---~~~~~-~~v~~~~~D~~d~~   65 (231)
                      +|||||||||||||++++++|++.||+|++++.            .. .. ......   ..... .+++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            489999999999999999999999999999851            00 00 001111   11222 67899999999999


Q ss_pred             HHHHHHcc--CCEEEEcc
Q 043777           66 SLLEAVKQ--VDVRFIPS   81 (231)
Q Consensus        66 ~l~~al~~--~d~~f~ps   81 (231)
                      .+.+++++  +|+++|-+
T Consensus        81 ~l~~~~~~~~~d~ViHlA   98 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFG   98 (393)
T ss_dssp             HHHHHHHHHCCSEEEECC
T ss_pred             HHHHHHHhhcchheeccc
Confidence            99999986  58888754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.34  E-value=2e-12  Score=108.20  Aligned_cols=77  Identities=18%  Similarity=0.003  Sum_probs=57.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchh-hhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFN-FSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~-~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ++++|||||||||||+++++.|+++|++|++++|+.+.... ........  .....+.+|+.|.+++.++++++|.+++
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~   89 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH   89 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence            36899999999999999999999999999999997532110 00111111  2234567899999999999999998665

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.33  E-value=3.6e-12  Score=107.34  Aligned_cols=78  Identities=19%  Similarity=0.221  Sum_probs=57.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhh---hhhc-CCcEEEEEcCCCHHHHHHHHccC--CE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLL---RVFH-SGVFDYWGLLEDEKSLLEAVKQV--DV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~---~~~~-~~v~~~~~D~~d~~~l~~al~~~--d~   76 (231)
                      |++||||||||||++|+++|+++|++|++++|..+. +. +.+.+   .... .++.++++|++|.+++.++++++  |+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            678999999999999999999999999999996532 11 11111   0111 67889999999999999999875  88


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +++.+.
T Consensus        82 v~h~aa   87 (357)
T d1db3a_          82 VYNLGA   87 (357)
T ss_dssp             EEECCC
T ss_pred             EEEeec
Confidence            777543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.32  E-value=1.3e-11  Score=101.79  Aligned_cols=68  Identities=24%  Similarity=0.200  Sum_probs=55.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      |+|||||||||||++++++|+++||+|++++|..+... ...++.+.  .+++++.+|++|.+.+.+.+..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   70 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT-RWRLRELGIEGDIQYEDGDMADACSVQRAVIK   70 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC-CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc-HHHHHHhcccCCcEEEEccccChHHhhhhhcc
Confidence            68999999999999999999999999999999764322 12223333  6788999999999999988876

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.30  E-value=1.5e-11  Score=102.09  Aligned_cols=79  Identities=20%  Similarity=0.182  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhh----hhhc-CCcEEEEEcCCCHHHHHHHHcc--C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLL----RVFH-SGVFDYWGLLEDEKSLLEAVKQ--V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~----~~~~-~~v~~~~~D~~d~~~l~~al~~--~   74 (231)
                      +|++||||||||||++|++.|+++||+|++++|..+. +. +...+    .... ..+.++.+|+++.+.+.++++.  +
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            4789999999999999999999999999999996542 11 10000    1112 4577889999999999998865  6


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |+++|-+.
T Consensus        81 D~Vih~Aa   88 (339)
T d1n7ha_          81 DEVYNLAA   88 (339)
T ss_dssp             SEEEECCS
T ss_pred             chhhhccc
Confidence            88777443

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.27  E-value=5e-11  Score=100.84  Aligned_cols=79  Identities=20%  Similarity=0.184  Sum_probs=57.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh-CCCCEEEEEcCCCC-------chhhhh---hh-------hhc-CCcEEEEEcCCCH
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE-YGHPKFALIRDSAS-------NFNFSL---LR-------VFH-SGVFDYWGLLEDE   64 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~-~g~~v~~~~R~~~~-------~~~~~~---~~-------~~~-~~v~~~~~D~~d~   64 (231)
                      .|||||||||||||++|+++|++ .|++|+++++-...       ......   +.       ... ....++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            68999999999999999999996 68999998752110       001110   00       011 4577899999999


Q ss_pred             HHHHHHHc---cCCEEEEccc
Q 043777           65 KSLLEAVK---QVDVRFIPSE   82 (231)
Q Consensus        65 ~~l~~al~---~~d~~f~ps~   82 (231)
                      +.+.++++   ++|+++|.+.
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa  102 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCA  102 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCC
T ss_pred             HHhhhhhhccceeehhhcccc
Confidence            99999986   4699887543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.27  E-value=3.6e-11  Score=100.10  Aligned_cols=77  Identities=18%  Similarity=0.127  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hh----hhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NF----SLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~----~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      +|+|||||||||||++|+++|++.|++|++++|....+. ..    ....... ..++++.+|+.|...+.....+.+.+
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~v   95 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV   95 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccccc
Confidence            679999999999999999999999999999998543311 10    1111112 67889999999999998888887775


Q ss_pred             EEc
Q 043777           78 FIP   80 (231)
Q Consensus        78 f~p   80 (231)
                      ++.
T Consensus        96 ~~~   98 (341)
T d1sb8a_          96 LHQ   98 (341)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.23  E-value=2.2e-11  Score=101.71  Aligned_cols=80  Identities=28%  Similarity=0.212  Sum_probs=62.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHc--cCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVK--QVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~--~~d~~f~p   80 (231)
                      |.|||||||||||++|+++|+++|++|++++|...... .....+.+. .+++++.+|++|.+.+..+++  ++|+++|.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            46999999999999999999999999999987433211 111112223 788999999999999999987  58999986


Q ss_pred             ccCC
Q 043777           81 SEYG   84 (231)
Q Consensus        81 s~~g   84 (231)
                      ....
T Consensus        82 Aa~~   85 (347)
T d1z45a2          82 AGLK   85 (347)
T ss_dssp             CSCC
T ss_pred             cccc
Confidence            5544

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.22  E-value=2.6e-11  Score=101.25  Aligned_cols=77  Identities=19%  Similarity=0.226  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh--cCCcEEEEEcCCCHHHHHHHHcc--CCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF--HSGVFDYWGLLEDEKSLLEAVKQ--VDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~l~~al~~--~d~~f~   79 (231)
                      +|||||||||||||+++++.|+++|++|++++|.....+  ......  ..+++++.+|++|++.+.++++.  .+++++
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~--~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~   85 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVP--SLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   85 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSS--CHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccH--HHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhh
Confidence            589999999999999999999999999999999765322  111222  26799999999999999999986  577776


Q ss_pred             ccc
Q 043777           80 PSE   82 (231)
Q Consensus        80 ps~   82 (231)
                      ...
T Consensus        86 ~aa   88 (356)
T d1rkxa_          86 MAA   88 (356)
T ss_dssp             CCS
T ss_pred             hhc
Confidence            543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1e-11  Score=102.65  Aligned_cols=35  Identities=23%  Similarity=0.363  Sum_probs=32.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|||||||||||||++++++|+++|++|++++|..
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~   35 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF   35 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCC
Confidence            47999999999999999999999999999998754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.20  E-value=2.1e-10  Score=94.69  Aligned_cols=75  Identities=23%  Similarity=0.203  Sum_probs=54.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEE------EcCCCCchhhhhhhhh-c-CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFAL------IRDSASNFNFSLLRVF-H-SGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~------~R~~~~~~~~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |||+|||||||||+++++.|+++|++|...      ++..... ....+... . .++.++.+|+.+...+......+|.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~   79 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG-NRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDA   79 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC-CGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccc-cHhHhhhhhcCCCeEEEEeccccchhhhccccccce
Confidence            689999999999999999999999876433      2221111 11111122 2 6789999999999999999988888


Q ss_pred             EEEc
Q 043777           77 RFIP   80 (231)
Q Consensus        77 ~f~p   80 (231)
                      +++.
T Consensus        80 vi~~   83 (322)
T d1r6da_          80 IVHF   83 (322)
T ss_dssp             EEEC
T ss_pred             EEee
Confidence            6653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.18  E-value=4e-11  Score=101.01  Aligned_cols=79  Identities=16%  Similarity=0.095  Sum_probs=60.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc--CCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ--VDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~--~d~~f~p   80 (231)
                      |||||||||||||++|+++|++.|+.+++..++.+.......+..+.  .+++++.+|++|.+.+.+++++  +|++|+.
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            68999999999999999999999998766555432211111122332  6889999999999999999875  7999986


Q ss_pred             ccC
Q 043777           81 SEY   83 (231)
Q Consensus        81 s~~   83 (231)
                      +..
T Consensus        81 Aa~   83 (361)
T d1kewa_          81 AAE   83 (361)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            544

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.7e-11  Score=97.15  Aligned_cols=75  Identities=20%  Similarity=0.116  Sum_probs=60.8

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      |. +++|+||||||+||++|+++|+++|.  +|++++|+..... .    .....+....+|+.+.+++.++++++|++|
T Consensus        12 m~-~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~-~----~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi   85 (232)
T d2bkaa1          12 MQ-NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-E----EAYKNVNQEVVDFEKLDDYASAFQGHDVGF   85 (232)
T ss_dssp             HT-CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC-S----GGGGGCEEEECCGGGGGGGGGGGSSCSEEE
T ss_pred             CC-CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc-c----cccceeeeeeeccccccccccccccccccc
Confidence            44 57899999999999999999999994  7999999764311 0    111567778899999999999999999998


Q ss_pred             Ecc
Q 043777           79 IPS   81 (231)
Q Consensus        79 ~ps   81 (231)
                      +..
T Consensus        86 ~~~   88 (232)
T d2bkaa1          86 CCL   88 (232)
T ss_dssp             ECC
T ss_pred             ccc
Confidence            753

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2e-10  Score=95.42  Aligned_cols=77  Identities=21%  Similarity=0.278  Sum_probs=57.0

Q ss_pred             CeE-EEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhh-hh----hhcCCcEEEEEcCCCHHHHHHHHcc--C
Q 043777            5 SNV-LVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSL-LR----VFHSGVFDYWGLLEDEKSLLEAVKQ--V   74 (231)
Q Consensus         5 ~~i-lVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~-~~----~~~~~v~~~~~D~~d~~~l~~al~~--~   74 (231)
                      ||| ||||||||||++++++|+++||+|++++|..+. +. +.+. ..    ....+++++.+|++|.+.+.+++.+  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            477 999999999999999999999999999997643 11 1110 00    1115678999999999999999976  4


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      +.+++..
T Consensus        81 ~~v~~~~   87 (347)
T d1t2aa_          81 TEIYNLG   87 (347)
T ss_dssp             SEEEECC
T ss_pred             ceeeeee
Confidence            5666543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.89  E-value=2.1e-09  Score=82.42  Aligned_cols=80  Identities=18%  Similarity=0.086  Sum_probs=64.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ++|+++||||+|+||+.+++.|+++|++|+++.|+...  ..+..+.+.  ..+.+..+|++|.+++.+++.++|+++..
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~   99 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDK--AQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA   99 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHH--HHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence            36899999999999999999999999999999998532  111112222  45567889999999999999999999886


Q ss_pred             ccCC
Q 043777           81 SEYG   84 (231)
Q Consensus        81 s~~g   84 (231)
                      ...|
T Consensus       100 Ag~g  103 (191)
T d1luaa1         100 GAIG  103 (191)
T ss_dssp             CCTT
T ss_pred             Cccc
Confidence            5544

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.82  E-value=3.9e-09  Score=84.14  Aligned_cols=78  Identities=22%  Similarity=0.181  Sum_probs=58.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ----   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~----   73 (231)
                      |+ +|+||||||+++||++++++|+++|+  .|++..|+...   .+.+.+.. .++.++.+|++|.+++.++++.    
T Consensus         1 M~-~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~---~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           1 MS-PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK---ATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CC-CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGG---CHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             Cc-CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHH---HHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            67 68999999999999999999999996  46667777532   22223333 6788999999999887665532    


Q ss_pred             -----CCEEEEccc
Q 043777           74 -----VDVRFIPSE   82 (231)
Q Consensus        74 -----~d~~f~ps~   82 (231)
                           +|+.+..+.
T Consensus        77 ~~~~~idilinnAG   90 (250)
T d1yo6a1          77 VGSDGLSLLINNAG   90 (250)
T ss_dssp             HGGGCCCEEEECCC
T ss_pred             hCCCCeEEEEEcCc
Confidence                 677776544

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.80  E-value=5.4e-09  Score=83.90  Aligned_cols=78  Identities=17%  Similarity=0.191  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      ++|+++||||+++||++++++|+++|++|.+.+|+.....  ..+..+.....+..+.+|++|++++.++++.       
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999999999875311  1122223335678899999999998877764       


Q ss_pred             CCEEEEc
Q 043777           74 VDVRFIP   80 (231)
Q Consensus        74 ~d~~f~p   80 (231)
                      +|+.+..
T Consensus        88 iDilVnn   94 (260)
T d1h5qa_          88 ISGLIAN   94 (260)
T ss_dssp             EEEEEEC
T ss_pred             CcEeccc
Confidence            5655543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.79  E-value=3e-09  Score=85.41  Aligned_cols=82  Identities=15%  Similarity=0.036  Sum_probs=61.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhh-hhhcCCcEEEEEcCCCHHHHHHHHcc----
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLL-RVFHSGVFDYWGLLEDEKSLLEAVKQ----   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~-~~~~~~v~~~~~D~~d~~~l~~al~~----   73 (231)
                      |.++|+++||||+++||++++++|+++|++|.+..|+.....  ..+.+ ......+..+.+|++|++++.++++.    
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            677899999999999999999999999999999999752211  01111 12225677889999999998877753    


Q ss_pred             ---CCEEEEccc
Q 043777           74 ---VDVRFIPSE   82 (231)
Q Consensus        74 ---~d~~f~ps~   82 (231)
                         +|+.+....
T Consensus        81 ~G~iDiLVnnAG   92 (260)
T d1x1ta1          81 MGRIDILVNNAG   92 (260)
T ss_dssp             HSCCSEEEECCC
T ss_pred             hCCCcEEEeecc
Confidence               787776443

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.5e-08  Score=80.58  Aligned_cols=82  Identities=11%  Similarity=-0.002  Sum_probs=61.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      .++.++||||+++||++++++|.++|++|.+.+|+... ....+.+.....++..+.+|++|++++.++++.       +
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999997532 001111222225678899999999998876653       6


Q ss_pred             CEEEEcccCC
Q 043777           75 DVRFIPSEYG   84 (231)
Q Consensus        75 d~~f~ps~~g   84 (231)
                      |..+..+..+
T Consensus        86 dilinnag~~   95 (244)
T d1yb1a_          86 SILVNNAGVV   95 (244)
T ss_dssp             SEEEECCCCC
T ss_pred             ceeEeecccc
Confidence            7777654433

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=1.7e-08  Score=80.17  Aligned_cols=76  Identities=22%  Similarity=0.142  Sum_probs=60.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~   79 (231)
                      ++|+++||||+++||++++++|+++|++|.+.+|+...  ..+..++. .++..+.+|++|+++++++++.   +|+.+.
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~--l~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVn   80 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSD--LVSLAKEC-PGIEPVCVDLGDWDATEKALGGIGPVDLLVN   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHhc-CCCeEEEEeCCCHHHHHHHHHHcCCCeEEEE
Confidence            46899999999999999999999999999999997421  11111222 5788899999999999999885   677665


Q ss_pred             cc
Q 043777           80 PS   81 (231)
Q Consensus        80 ps   81 (231)
                      ..
T Consensus        81 nA   82 (242)
T d1cyda_          81 NA   82 (242)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.4e-08  Score=79.29  Aligned_cols=76  Identities=26%  Similarity=0.155  Sum_probs=59.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc---CCEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ---VDVRFI   79 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~---~d~~f~   79 (231)
                      ++|+++||||+++||++++++|+++|++|.+.+|+...  ..+..+++ .++..+.+|++|+++++++++.   +|+.+.
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~--l~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVn   82 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD--LDSLVREC-PGIEPVCVDLGDWEATERALGSVGPVDLLVN   82 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHS-TTCEEEECCTTCHHHHHHHHTTCCCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHH--HHHHHHhc-CCCeEEEEeCCCHHHHHHHHHHhCCceEEEe
Confidence            36899999999999999999999999999999997421  11111222 5788899999999999998876   577665


Q ss_pred             cc
Q 043777           80 PS   81 (231)
Q Consensus        80 ps   81 (231)
                      ..
T Consensus        83 nA   84 (244)
T d1pr9a_          83 NA   84 (244)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.74  E-value=8.5e-09  Score=82.04  Aligned_cols=77  Identities=12%  Similarity=-0.030  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||+++++.|+++|++|.+.+|+...  ..+..+++...+..+++|++|++++.++++.       +|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEE--GKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence            36899999999999999999999999999999997521  1222334445678899999999988777654       67


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.+..+
T Consensus        83 ilinnA   88 (244)
T d1nffa_          83 VLVNNA   88 (244)
T ss_dssp             EEEECC
T ss_pred             EEEECC
Confidence            766543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.74  E-value=1.3e-08  Score=81.01  Aligned_cols=77  Identities=13%  Similarity=0.030  Sum_probs=60.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~   76 (231)
                      +|.++||||+++||+++++.|+++|+.|.+.+|+.... ..+.++.....+..+.+|++|++++.++++       .+|+
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE-AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH-HHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999976321 122233333668889999999999877665       3787


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      .+...
T Consensus        84 lVnnA   88 (247)
T d2ew8a1          84 LVNNA   88 (247)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            66544

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.74  E-value=1.1e-08  Score=81.28  Aligned_cols=77  Identities=14%  Similarity=0.067  Sum_probs=60.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||+.++++|+++|++|.+.+|+...  ..+..+++...+..+++|++++++++++++.       +|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERL--LAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            36899999999999999999999999999999997531  1223334446677899999999998776653       78


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.+..+
T Consensus        82 iLinnA   87 (241)
T d2a4ka1          82 GVAHFA   87 (241)
T ss_dssp             EEEEGG
T ss_pred             Eecccc
Confidence            776643

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.73  E-value=2.2e-09  Score=86.52  Aligned_cols=62  Identities=26%  Similarity=0.413  Sum_probs=48.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEccc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPSE   82 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps~   82 (231)
                      |||||||||||||++|++.|.+.|+. +++.++..         .       +.+|++|.+.+.+++++  +|++++-+.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~---------~-------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNL-IALDVHSK---------E-------FCGDFSNPKGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCS---------S-------SCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCc---------c-------ccCcCCCHHHHHHHHHHcCCCEEEEecc
Confidence            68999999999999999999999874 44444431         1       23699999999999986  599988654


Q ss_pred             C
Q 043777           83 Y   83 (231)
Q Consensus        83 ~   83 (231)
                      .
T Consensus        64 ~   64 (298)
T d1n2sa_          64 H   64 (298)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.73  E-value=8.3e-09  Score=82.42  Aligned_cols=80  Identities=11%  Similarity=0.126  Sum_probs=60.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      ++|+++||||+++||+++++.|+++|++|.+.+|+...-.  ..++.+.....+..+.+|++|++++.++++.       
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999999999753210  1112222235677889999999988776653       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|+.+....
T Consensus        84 iDiLVnnAG   92 (251)
T d1vl8a_          84 LDTVVNAAG   92 (251)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            788776543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.73  E-value=8.9e-09  Score=82.58  Aligned_cols=70  Identities=16%  Similarity=0.115  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      ++|+++||||+++||++++++|+++|++|.+.+|+... ....+.+......+..+.+|+++.++++++++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~   75 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQ   75 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHH
Confidence            47899999999999999999999999999999997532 00112222222556778999999998876654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.73  E-value=9e-09  Score=81.77  Aligned_cols=75  Identities=16%  Similarity=0.029  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||++++++|+++|++|.+.+|+...  ..+..+.  .++..+.+|++|+++++++++.       +|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~--l~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   79 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP--LREAAEA--VGAHPVVMDVADPASVERGFAEALAHLGRLD   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHT--TTCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHH--cCCeEEEEecCCHHHHHHHHHHHHHhcCCce
Confidence            46899999999999999999999999999999997421  1111111  4678899999999998877653       67


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.+...
T Consensus        80 ilVnnA   85 (242)
T d1ulsa_          80 GVVHYA   85 (242)
T ss_dssp             EEEECC
T ss_pred             EEEECC
Confidence            766543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=1.4e-08  Score=81.35  Aligned_cols=80  Identities=20%  Similarity=0.202  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc-------c
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK-------Q   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~-------~   73 (231)
                      +|.++||||+++||+++++.|+++|+.|++..|+... ....+.+....  ..+..+.+|++|++++.++++       +
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~   89 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG   89 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            6789999999999999999999999999999987532 00111122211  346678999999998877654       3


Q ss_pred             CCEEEEcccC
Q 043777           74 VDVRFIPSEY   83 (231)
Q Consensus        74 ~d~~f~ps~~   83 (231)
                      +|+.++...+
T Consensus        90 iD~lVnnAg~   99 (257)
T d1xg5a_          90 VDICINNAGL   99 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            7887765443

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.72  E-value=9.5e-09  Score=82.28  Aligned_cols=77  Identities=13%  Similarity=0.085  Sum_probs=60.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||+++++.|+++|++|.+.+|+...  ..+..+++...+..+.+|++|++++.++++.       +|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEA--ARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHH--HHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            46899999999999999999999999999999997421  1223344456788899999999998877654       67


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.+...
T Consensus        82 ilVnnA   87 (256)
T d1k2wa_          82 ILVNNA   87 (256)
T ss_dssp             EEEECC
T ss_pred             EEEeec
Confidence            766543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.72  E-value=1.1e-08  Score=81.74  Aligned_cols=77  Identities=13%  Similarity=0.028  Sum_probs=60.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||++++++|+++|+.|.+.+|+...  ..+..+++...+..+++|++|++++.++++.       +|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEE--GAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence            36899999999999999999999999999999997521  1222334445678899999999998777653       67


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.+...
T Consensus        82 ilVnnA   87 (254)
T d1hdca_          82 GLVNNA   87 (254)
T ss_dssp             EEEECC
T ss_pred             EEEecC
Confidence            766544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.71  E-value=8.2e-09  Score=82.43  Aligned_cols=79  Identities=18%  Similarity=0.176  Sum_probs=59.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc-hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN-FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      ++|.++||||+++||++++++|.++|++|.+.+|+...- ...+.++.....+..+.+|++|++++.++++.       +
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            478999999999999999999999999999999974320 01112222224678899999999998877763       6


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |+.+...
T Consensus        89 Dilvnna   95 (251)
T d2c07a1          89 DILVNNA   95 (251)
T ss_dssp             CEEEECC
T ss_pred             eeeeecc
Confidence            7766533

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.71  E-value=7e-09  Score=84.76  Aligned_cols=59  Identities=19%  Similarity=0.289  Sum_probs=48.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc--CCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ--VDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~--~d~~f~ps   81 (231)
                      +|||||||||||||++|+++|+++|+.++++.+..                   .+|+.|.+.+.+.+++  +|.+++..
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------~~~~~~~~~~~~~~~~~~~d~v~~~a   62 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASERIDQVYLAA   62 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------hccccCHHHHHHHHhhcCCCEEEEcc
Confidence            67999999999999999999999999887654432                   1488899999888865  78888754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.71  E-value=1.5e-08  Score=80.64  Aligned_cols=79  Identities=15%  Similarity=0.135  Sum_probs=57.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh---CCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--------
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE---YGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--------   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~---~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--------   72 (231)
                      ||+|+||||+++||++++++|++   +|+.|++.+|+...-...+.+.....++.++.+|++|++++.++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            46899999999999999999974   6899999999865311111111112678899999999988776554        


Q ss_pred             -cCCEEEEccc
Q 043777           73 -QVDVRFIPSE   82 (231)
Q Consensus        73 -~~d~~f~ps~   82 (231)
                       .+|+.+....
T Consensus        82 ~~iDiLvnNAg   92 (248)
T d1snya_          82 QGLNVLFNNAG   92 (248)
T ss_dssp             GCCSEEEECCC
T ss_pred             CCcceEEeecc
Confidence             2677665443

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.70  E-value=1.2e-08  Score=81.81  Aligned_cols=79  Identities=22%  Similarity=0.173  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      ++|+++||||+++||+++++.|.++|+.|.+.+|+... ....+.++.....+..+.+|++|++++.++++.       +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999999999997432 001111222224677889999999988776653       6


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |+.+...
T Consensus        84 DilVnna   90 (260)
T d1zema1          84 DFLFNNA   90 (260)
T ss_dssp             CEEEECC
T ss_pred             Ceehhhh
Confidence            7766543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.69  E-value=1e-08  Score=82.33  Aligned_cols=78  Identities=13%  Similarity=0.119  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +|+++||||+++||++++++|.++|++|.+.+|+.....  ..+.++.....+..+++|++|++++.++++.       +
T Consensus         7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   86 (261)
T d1geea_           7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL   86 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999753211  1122222224567789999999988777653       6


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |+.+...
T Consensus        87 DiLVnnA   93 (261)
T d1geea_          87 DVMINNA   93 (261)
T ss_dssp             CEEEECC
T ss_pred             CEeeccc
Confidence            8766643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=9.5e-09  Score=82.15  Aligned_cols=80  Identities=16%  Similarity=0.161  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      ++|+++||||+++||+++++.|+++|++|.+.+|+.....  ..++..... ..+..+.+|++|+++++++++.      
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999753210  111111222 4577889999999988777653      


Q ss_pred             -CCEEEEccc
Q 043777           74 -VDVRFIPSE   82 (231)
Q Consensus        74 -~d~~f~ps~   82 (231)
                       +|+.+....
T Consensus        82 ~iDilVnnAg   91 (254)
T d2gdza1          82 RLDILVNNAG   91 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CcCeeccccc
Confidence             677666443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.69  E-value=9.6e-09  Score=82.22  Aligned_cols=79  Identities=14%  Similarity=0.116  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d   75 (231)
                      +|+++||||+++||++++++|+++|+.|.+.+|+... ....+.++.....+..+++|++|++++.++++       .+|
T Consensus        11 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iD   90 (255)
T d1fmca_          11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD   90 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999987432 00111222222567789999999998877665       378


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      +.+..+.
T Consensus        91 ilvnnAG   97 (255)
T d1fmca_          91 ILVNNAG   97 (255)
T ss_dssp             EEEECCC
T ss_pred             EeeeCCc
Confidence            7666443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.69  E-value=1.3e-08  Score=81.04  Aligned_cols=76  Identities=21%  Similarity=0.126  Sum_probs=59.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      |-++|+++||||+++||++++++|+++|+.|.+.+|+...   .+..+.  .+...+++|++|+++++++++.       
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~---~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG---KEVAEA--IGGAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH---HHHHHH--HTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHH--cCCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            4468999999999999999999999999999999997531   222222  3567889999999988776653       


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|+.+...
T Consensus        77 iDiLVnnA   84 (248)
T d2d1ya1          77 VDVLVNNA   84 (248)
T ss_dssp             CCEEEECC
T ss_pred             CCeEEEeC
Confidence            78766543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.68  E-value=1.3e-08  Score=80.77  Aligned_cols=77  Identities=14%  Similarity=0.088  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||+++++.|+++|++|.+.+|+...  ..+..+++...+..+.+|++|++++.++++.       +|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~--l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENG--AQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH--HHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence            46899999999999999999999999999999997421  1222233445677889999999988777653       77


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.+...
T Consensus        81 ilVnnA   86 (243)
T d1q7ba_          81 ILVNNA   86 (243)
T ss_dssp             EEEECC
T ss_pred             eehhhh
Confidence            766543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.68  E-value=1.5e-08  Score=81.10  Aligned_cols=79  Identities=20%  Similarity=0.087  Sum_probs=57.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc-hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN-FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      |.++||||+++||++++++|+++|+.|.+.+|+...- ...+.+......+..+.+|++|++++.++++.       +|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4569999999999999999999999999999975320 01112222225677889999999988776653       677


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      .+....+
T Consensus        82 lVnnAG~   88 (255)
T d1gega_          82 IVNNAGV   88 (255)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            7664433

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.68  E-value=1.5e-08  Score=82.55  Aligned_cols=79  Identities=10%  Similarity=-0.007  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~   74 (231)
                      +|+++||||+|+||++++++|+++|++|++++|+...-.  ..++.......+..+.+|+++.+++.++++       .+
T Consensus        25 gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  104 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHP  104 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcccc
Confidence            488999999999999999999999999999999753210  111222223567788999999998876654       36


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |+......
T Consensus       105 DilvnnAg  112 (294)
T d1w6ua_         105 NIVINNAA  112 (294)
T ss_dssp             SEEEECCC
T ss_pred             chhhhhhh
Confidence            77665443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.67  E-value=1.6e-08  Score=80.94  Aligned_cols=78  Identities=22%  Similarity=0.136  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +|.++||||+++||++++++|+++|++|.+.+|+... ....+.++.....+..+++|++|++++.++++.       +|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            5788999999999999999999999999999997432 001122222235677899999999998777653       67


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.+...
T Consensus        82 ilVnnA   87 (257)
T d2rhca1          82 VLVNNA   87 (257)
T ss_dssp             EEEECC
T ss_pred             EEEecc
Confidence            766543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=2.7e-08  Score=79.33  Aligned_cols=77  Identities=17%  Similarity=0.095  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||+++++.|+++|+.|.+++|+...   .+.+.....++..+.+|++|+++++++++.       +|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~---~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESG---GRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD   81 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            36899999999999999999999999999999987421   111111125678899999999998777653       68


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      +.+....
T Consensus        82 ilVnnAG   88 (250)
T d1ydea1          82 CVVNNAG   88 (250)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            7776543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.66  E-value=2.4e-08  Score=80.30  Aligned_cols=76  Identities=12%  Similarity=0.112  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +|+++||||+++||+.++++|+++|++|.+.+|+...  ..+..+++.  ..+.++.+|++|++++.++++.       +
T Consensus         6 gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~--~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDH--GQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            6899999999999999999999999999999997421  122223333  4567789999999998877753       6


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |+.+...
T Consensus        84 D~lVnnA   90 (268)
T d2bgka1          84 DIMFGNV   90 (268)
T ss_dssp             CEEEECC
T ss_pred             ceecccc
Confidence            8776543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.66  E-value=1.5e-08  Score=81.18  Aligned_cols=77  Identities=16%  Similarity=0.140  Sum_probs=57.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      ++|+++||||+++||++++++|+++|++|.+.+|+...  ..+..+++.   ..+..+.+|++|++++.++++.      
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~--l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE--LNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999997432  112222332   4566789999999987766532      


Q ss_pred             --CCEEEEcc
Q 043777           74 --VDVRFIPS   81 (231)
Q Consensus        74 --~d~~f~ps   81 (231)
                        +|+.+...
T Consensus        85 ~~idilvnnA   94 (259)
T d2ae2a_          85 GKLNILVNNA   94 (259)
T ss_dssp             TCCCEEEECC
T ss_pred             CCceEEEECC
Confidence              57766543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.66  E-value=2.1e-08  Score=80.04  Aligned_cols=76  Identities=13%  Similarity=0.068  Sum_probs=58.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +|+++||||+++||+++++.|+++|++|.+.+|+...  ..+..+.+.  .++..+.+|++|++++.++++.       +
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDV--GEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            6899999999999999999999999999999997421  112222333  5678899999999988776653       6


Q ss_pred             CEEEEcc
Q 043777           75 DVRFIPS   81 (231)
Q Consensus        75 d~~f~ps   81 (231)
                      |+.....
T Consensus        84 DiLVnnA   90 (251)
T d1zk4a1          84 STLVNNA   90 (251)
T ss_dssp             CEEEECC
T ss_pred             eEEEecc
Confidence            8766544

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.65  E-value=2.1e-08  Score=80.23  Aligned_cols=70  Identities=11%  Similarity=0.014  Sum_probs=53.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      .|++|||||+++||+++++.|+++|++|++..|+.....  ..+.+......+..+.+|++|++++.++++.
T Consensus         6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~   77 (259)
T d1ja9a_           6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK   77 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHH
Confidence            589999999999999999999999999998877653211  1112222235677899999999998887764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.64  E-value=2.2e-08  Score=80.66  Aligned_cols=79  Identities=14%  Similarity=0.042  Sum_probs=58.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      ++|+++||||+++||++|+++|+++|++|.+++|+.....  ..+.++.....+..+++|++|++++.+.++.       
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999999988753211  1111222225677889999999988777654       


Q ss_pred             CCEEEEcc
Q 043777           74 VDVRFIPS   81 (231)
Q Consensus        74 ~d~~f~ps   81 (231)
                      +|+.....
T Consensus        97 idilV~na  104 (272)
T d1g0oa_          97 LDIVCSNS  104 (272)
T ss_dssp             CCEEEECC
T ss_pred             CCcccccc
Confidence            57665543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.64  E-value=7.5e-08  Score=76.72  Aligned_cols=71  Identities=20%  Similarity=0.212  Sum_probs=53.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCCCC-chhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHccC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDSAS-NFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~~~-~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      ..+++||||+|+||+.+++.|.++|+. |+++.|+... ....+..+.+.   ..+.++.+|++|.+++.++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            468999999999999999999999985 7777886322 11122223332   45677899999999999888763

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.63  E-value=2.5e-08  Score=79.89  Aligned_cols=80  Identities=18%  Similarity=0.099  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-ch-hhhhhhhhc-CCcEEEEEcCCCHHHHHHHHcc------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NF-NFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQ------   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~-~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~------   73 (231)
                      ++|+++||||+++||+.+++.|+++|++|.+.+|+... .. ..+...... ..+..+.+|++|++++.++++.      
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999999999997532 00 111111112 4567789999999998776653      


Q ss_pred             -CCEEEEccc
Q 043777           74 -VDVRFIPSE   82 (231)
Q Consensus        74 -~d~~f~ps~   82 (231)
                       +|+.+..+.
T Consensus        83 ~iDiLVnnAG   92 (258)
T d1iy8a_          83 RIDGFFNNAG   92 (258)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCc
Confidence             787766443

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.63  E-value=2.8e-08  Score=80.29  Aligned_cols=77  Identities=16%  Similarity=0.153  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||++++++|.++|++|.+++|+...  ..+..+++...+..+.+|+++.+++.++++.       +|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~--l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAER--LAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence            46899999999999999999999999999999997421  1222233345678899999999988777653       67


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.+...
T Consensus        82 ilvnnA   87 (276)
T d1bdba_          82 TLIPNA   87 (276)
T ss_dssp             EEECCC
T ss_pred             cccccc
Confidence            766543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=2.9e-08  Score=81.14  Aligned_cols=80  Identities=15%  Similarity=0.106  Sum_probs=59.3

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc-h-hhhhhhhhc----CCcEEEEEcCCCHHHHHHHHcc--
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN-F-NFSLLRVFH----SGVFDYWGLLEDEKSLLEAVKQ--   73 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~-~-~~~~~~~~~----~~v~~~~~D~~d~~~l~~al~~--   73 (231)
                      .++|+++||||+++||++++++|+++|++|.+.+|+...- . ..++...+.    ..+..+.+|++|++++.++++.  
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999975321 0 111111111    3577789999999998776653  


Q ss_pred             -----CCEEEEcc
Q 043777           74 -----VDVRFIPS   81 (231)
Q Consensus        74 -----~d~~f~ps   81 (231)
                           +|+.+...
T Consensus        90 ~~~G~iDiLVnnA  102 (297)
T d1yxma1          90 DTFGKINFLVNNG  102 (297)
T ss_dssp             HHHSCCCEEEECC
T ss_pred             HHhCCeEEEEeec
Confidence                 68766543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.62  E-value=2.2e-08  Score=80.29  Aligned_cols=76  Identities=14%  Similarity=0.045  Sum_probs=57.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---cCCcEEEEEcCCCHHHHHHHHc-------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---HSGVFDYWGLLEDEKSLLEAVK-------   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~l~~al~-------   72 (231)
                      ++|+++||||+++||++++++|+++|+.|.+++|+...  ..+..+.+   ...+..+.+|++|++++.++++       
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~--l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYE--LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH--HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999999999997532  11122222   2567888999999988766553       


Q ss_pred             c-CCEEEEc
Q 043777           73 Q-VDVRFIP   80 (231)
Q Consensus        73 ~-~d~~f~p   80 (231)
                      + +|+.+..
T Consensus        85 g~idilvnn   93 (259)
T d1xq1a_          85 GKLDILINN   93 (259)
T ss_dssp             TCCSEEEEE
T ss_pred             CCccccccc
Confidence            2 6776553

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.61  E-value=4.4e-08  Score=77.45  Aligned_cols=68  Identities=25%  Similarity=0.249  Sum_probs=55.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      ++|+++||||+++||++++++|+++|+.|.+..|+...          ...+..+++|++|++++.++++.       +|
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   75 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----------PKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVE   75 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC----------CTTSEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch----------hcCceEEEEecCCHHHHHHHHHHHHHhcCCce
Confidence            36899999999999999999999999999999997531          13456789999999988776653       67


Q ss_pred             EEEEc
Q 043777           76 VRFIP   80 (231)
Q Consensus        76 ~~f~p   80 (231)
                      +....
T Consensus        76 iLVnn   80 (237)
T d1uzma1          76 VLVSN   80 (237)
T ss_dssp             EEEEE
T ss_pred             EEEee
Confidence            76553

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.59  E-value=2.2e-08  Score=80.74  Aligned_cols=79  Identities=14%  Similarity=0.053  Sum_probs=58.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      ++|+++||||+++||++++++|.++|++|.+.+|+... ....+.+....   ..+..+.+|++|++++.++++.     
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36899999999999999999999999999999997532 00111121211   3467899999999988776653     


Q ss_pred             --CCEEEEcc
Q 043777           74 --VDVRFIPS   81 (231)
Q Consensus        74 --~d~~f~ps   81 (231)
                        +|+.+...
T Consensus        84 g~iDilvnnA   93 (272)
T d1xkqa_          84 GKIDVLVNNA   93 (272)
T ss_dssp             SCCCEEEECC
T ss_pred             CCceEEEeCC
Confidence              68776543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.57  E-value=6.5e-08  Score=77.10  Aligned_cols=77  Identities=13%  Similarity=0.123  Sum_probs=55.7

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------C
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------V   74 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~   74 (231)
                      +|+++||||+|  +||++++++|+++|++|.+..|+.......+...........+++|++|+++++++++.       +
T Consensus         8 gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (256)
T d1ulua_           8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL   87 (256)
T ss_dssp             TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence            68999999997  79999999999999999888876432111111111114567889999999988877654       5


Q ss_pred             CEEEEc
Q 043777           75 DVRFIP   80 (231)
Q Consensus        75 d~~f~p   80 (231)
                      |+....
T Consensus        88 DilVnn   93 (256)
T d1ulua_          88 DYLVHA   93 (256)
T ss_dssp             EEEEEC
T ss_pred             eEEEec
Confidence            665543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.57  E-value=2.7e-08  Score=79.89  Aligned_cols=78  Identities=10%  Similarity=0.002  Sum_probs=58.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhh--c-CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVF--H-SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~--~-~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      ++|.++||||+++||++++++|+++|++|.+.+|+... ....+.+...  . .++..+.+|++|++++.++++.     
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36899999999999999999999999999999997532 0011111121  1 3478899999999988877653     


Q ss_pred             --CCEEEEc
Q 043777           74 --VDVRFIP   80 (231)
Q Consensus        74 --~d~~f~p   80 (231)
                        +|+.+..
T Consensus        84 g~iDilvnn   92 (264)
T d1spxa_          84 GKLDILVNN   92 (264)
T ss_dssp             SCCCEEEEC
T ss_pred             CCCCEeecc
Confidence              6776654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.57  E-value=2.7e-08  Score=80.36  Aligned_cols=78  Identities=9%  Similarity=0.016  Sum_probs=57.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC-chhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-----
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS-NFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-----   73 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~-~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-----   73 (231)
                      ++|+++||||+++||++++++|+++|++|.+.+|+... ....+.+....   ..+..+.+|++|++++.++++.     
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999997532 00111122211   3467899999999988776653     


Q ss_pred             --CCEEEEc
Q 043777           74 --VDVRFIP   80 (231)
Q Consensus        74 --~d~~f~p   80 (231)
                        +|+....
T Consensus        83 G~iDilVnn   91 (274)
T d1xhla_          83 GKIDILVNN   91 (274)
T ss_dssp             SCCCEEEEC
T ss_pred             CCceEEEee
Confidence              6776654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.56  E-value=3.7e-08  Score=78.65  Aligned_cols=76  Identities=12%  Similarity=0.025  Sum_probs=59.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d~   76 (231)
                      +|+++||||+++||++++++|+++|+.|.+.+|+...  ..+..+++......+++|++|++++.++++.       +|+
T Consensus         6 gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAA--GQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH--HHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            6899999999999999999999999999999986421  1223334446677889999999988776654       677


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      .+...
T Consensus        84 lVnnA   88 (253)
T d1hxha_          84 LVNNA   88 (253)
T ss_dssp             EEECC
T ss_pred             EEecc
Confidence            66543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.56  E-value=2.8e-08  Score=76.70  Aligned_cols=35  Identities=29%  Similarity=0.347  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~   38 (231)
                      +|||||||||||||++|+++|+++|+  .|.+++|+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            58999999999999999999999998  455556653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=98.55  E-value=1.2e-07  Score=75.54  Aligned_cols=79  Identities=15%  Similarity=0.134  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch-hhhhhhhhc-CCcEEEEEcCC-CHHHHHHHHc-------
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF-NFSLLRVFH-SGVFDYWGLLE-DEKSLLEAVK-------   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~-~~~~~~~~~-~~v~~~~~D~~-d~~~l~~al~-------   72 (231)
                      ++|+|+||||+++||+.++++|+++|++|+++.|+..... ..+...... .++.++.+|++ +.+++.++++       
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999988764311 111111222 46778899997 6555655443       


Q ss_pred             cCCEEEEcc
Q 043777           73 QVDVRFIPS   81 (231)
Q Consensus        73 ~~d~~f~ps   81 (231)
                      .+|+.+..+
T Consensus        84 ~iDilvnnA   92 (254)
T d1sbya1          84 TVDILINGA   92 (254)
T ss_dssp             CCCEEEECC
T ss_pred             CCCEEEeCC
Confidence            378766543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=98.52  E-value=1.3e-07  Score=75.83  Aligned_cols=73  Identities=10%  Similarity=0.074  Sum_probs=54.6

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777            1 MAGKSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         1 M~~~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      |.++|++|||||+|  +||.+++++|+++|++|.++.|+.......+.+........+..+|+++.+++.+++..
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~   76 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNS   76 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHH
Confidence            45689999999987  79999999999999999999998532111111222225567789999999887776643

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.50  E-value=7.5e-08  Score=76.37  Aligned_cols=77  Identities=18%  Similarity=0.149  Sum_probs=56.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------CC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------VD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------~d   75 (231)
                      +.++||||+++||++++++|+++|++|.+..++.....  ..+.++.....+..+.+|++|++++.++++.       +|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999988766542111  1122223335677889999999998777653       67


Q ss_pred             EEEEcc
Q 043777           76 VRFIPS   81 (231)
Q Consensus        76 ~~f~ps   81 (231)
                      +.....
T Consensus        82 iLVnnA   87 (244)
T d1edoa_          82 VVVNNA   87 (244)
T ss_dssp             EEEECC
T ss_pred             cccccc
Confidence            766543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=6.3e-08  Score=78.01  Aligned_cols=79  Identities=18%  Similarity=0.038  Sum_probs=56.6

Q ss_pred             CCeE-EEEcCCChhHHHHHHHHHhC-CCCEEEEEcCCCCc-hhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc-------
Q 043777            4 KSNV-LVIGAIGRIGYHFTRRSIEY-GHPKFALIRDSASN-FNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ-------   73 (231)
Q Consensus         4 ~~~i-lVtGatG~iG~~i~~~L~~~-g~~v~~~~R~~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~-------   73 (231)
                      .|+| +||||+++||+.++++|+++ |+.|++..|+...- ...+.++.....+.++.+|++|.+++.++++.       
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4555 89999999999999999986 89999999975321 01112222225688899999999998766553       


Q ss_pred             CCEEEEccc
Q 043777           74 VDVRFIPSE   82 (231)
Q Consensus        74 ~d~~f~ps~   82 (231)
                      +|+.+..+.
T Consensus        82 iDiLVnNAG   90 (275)
T d1wmaa1          82 LDVLVNNAG   90 (275)
T ss_dssp             EEEEEECCC
T ss_pred             cEEEEEcCC
Confidence            676665443

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=6.4e-08  Score=77.79  Aligned_cols=80  Identities=19%  Similarity=0.137  Sum_probs=56.2

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc------
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK------   72 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~------   72 (231)
                      |.++|+++||||+++||++++++|+++|++|.+++|+...-.  ..+........+..+.+|..+.+.+....+      
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999753200  111111111446677889998887665444      


Q ss_pred             -cCCEEEEc
Q 043777           73 -QVDVRFIP   80 (231)
Q Consensus        73 -~~d~~f~p   80 (231)
                       ..|.....
T Consensus        91 g~~~~li~n   99 (269)
T d1xu9a_          91 GGLDMLILN   99 (269)
T ss_dssp             TSCSEEEEC
T ss_pred             CCccccccc
Confidence             35665553

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=98.44  E-value=1e-07  Score=75.34  Aligned_cols=76  Identities=12%  Similarity=-0.024  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCC-------EEEEEcCCCCchhhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc-
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHP-------KFALIRDSASNFNFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ-   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~-------v~~~~R~~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~-   73 (231)
                      ..|+||||+++||++++++|.++|++       |.+..|+...  ..+...++.   ..+..+.+|++|++++.++++. 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~--l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD--LEKISLECRAEGALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH--HHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHH--HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            35899999999999999999999987       7777776421  111112222   4466789999999988776653 


Q ss_pred             ------CCEEEEccc
Q 043777           74 ------VDVRFIPSE   82 (231)
Q Consensus        74 ------~d~~f~ps~   82 (231)
                            +|+.+....
T Consensus        80 ~~~~g~iDilvnnAg   94 (240)
T d2bd0a1          80 VERYGHIDCLVNNAG   94 (240)
T ss_dssp             HHHTSCCSEEEECCC
T ss_pred             HHHcCCcceeecccc
Confidence                  687766443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4e-07  Score=71.96  Aligned_cols=68  Identities=12%  Similarity=0.074  Sum_probs=53.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      ++|.++||||+++||++++++|.++|++|.+++|+...  ..+..+++........+|+.+.+.+.+...
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   71 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG--GEAQAKKLGNNCVFAPADVTSEKDVQTALA   71 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSS--HHHHHHHHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHHhCCCccccccccccccccccccc
Confidence            47899999999999999999999999999999998643  122334444677888999999877655444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.43  E-value=3.2e-07  Score=72.13  Aligned_cols=71  Identities=27%  Similarity=0.234  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCC-HHHHHHHHccCCEEEEcc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLED-EKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~l~~al~~~d~~f~ps   81 (231)
                      ++|+++||||+++||++++++|+++|++|.+.+|+..      .++.  .+.+.+.+|+++ .+.+.+.+..+|+.+...
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~------~l~~--~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE------LLKR--SGHRYVVCDLRKDLDLLFEKVKEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH------HHHH--TCSEEEECCTTTCHHHHHHHSCCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH------HHHh--cCCcEEEcchHHHHHHHHHHhCCCcEEEecc
Confidence            3789999999999999999999999999999998731      1222  456788899976 355666666789877644

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.43  E-value=5.6e-07  Score=64.29  Aligned_cols=71  Identities=20%  Similarity=0.269  Sum_probs=55.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      |+|+|+|+ |.+|+.+++.|.+.|++|+++.+++.   +.+.+.. ..++.++.+|.+|++.+.++ +++++.....
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~---~~~~~~~-~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKD---ICKKASA-EIDALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHH---HHHHHHH-HCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChh---hhhhhhh-hhhhhhccCcccchhhhhhcChhhhhhhccc
Confidence            78999998 99999999999999999999988642   1111111 14788999999999999988 5678876543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=2.7e-07  Score=74.06  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=27.2

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCC-CEEEEEc
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGH-PKFALIR   36 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R   36 (231)
                      |||||||||||++++++|+++|+ .|+++.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            89999999999999999999995 6888764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=1.2e-07  Score=75.75  Aligned_cols=67  Identities=13%  Similarity=0.026  Sum_probs=50.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh---CCCCEEEEEcCCCCchhhhhhhhh----c-CCcEEEEEcCCCHHHHHHHHc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE---YGHPKFALIRDSASNFNFSLLRVF----H-SGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~---~g~~v~~~~R~~~~~~~~~~~~~~----~-~~v~~~~~D~~d~~~l~~al~   72 (231)
                      +|.++||||+++||++++++|.+   +|+.|++++|+...  ..+..+++    . ..+..+.+|++|++++.++++
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~--l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~   80 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM--LRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLS   80 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHH--HHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHH--HHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence            57899999999999999999975   79999999997532  11111222    1 356778999999999887764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=8.3e-07  Score=70.16  Aligned_cols=73  Identities=15%  Similarity=0.102  Sum_probs=56.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHc---cCCEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVK---QVDVR   77 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~---~~d~~   77 (231)
                      ++|+++||||+++||+++++.|+++|++|++.+|+..      .+++..  .++....+|+.+.+.++...+   .+|..
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~------~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~l   78 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINES------KLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH------HHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHH------HHHHHHhccCCceeeeeccccccccccccccccceeE
Confidence            3689999999999999999999999999999999742      112222  677888899998887776665   46776


Q ss_pred             EEcc
Q 043777           78 FIPS   81 (231)
Q Consensus        78 f~ps   81 (231)
                      ++..
T Consensus        79 Vn~a   82 (245)
T d2ag5a1          79 FNVA   82 (245)
T ss_dssp             EECC
T ss_pred             Eecc
Confidence            6543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.38  E-value=2.6e-07  Score=73.65  Aligned_cols=71  Identities=17%  Similarity=0.110  Sum_probs=52.1

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            1 MAGKSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         1 M~~~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      |.++|+++||||+|  +||++++++|.++|++|.+..|+... ...+..+.+......+++|+++++++..+++
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~-~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~   75 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR-LIQRITDRLPAKAPLLELDVQNEEHLASLAG   75 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHH-HHHHHHTTSSSCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHH-HHHHHHHHcCCceeeEeeecccccccccccc
Confidence            45689999999765  59999999999999999999987531 0111222333567788999999977655543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=98.32  E-value=6.4e-07  Score=70.99  Aligned_cols=73  Identities=10%  Similarity=0.039  Sum_probs=53.2

Q ss_pred             CCCCCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777            1 MAGKSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         1 M~~~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      |.++|+++||||+|  +||+++++.|+++|++|++..|+.......+...........+..|+.+..+..+.++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAE   76 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHH
Confidence            34589999999998  79999999999999999999997532111111111124567788899998887776654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.28  E-value=1.9e-06  Score=61.33  Aligned_cols=69  Identities=17%  Similarity=0.295  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~p   80 (231)
                      |+++|+|+ |.+|+.+++.|.+.|++|+++..++.      ..+.+. .+..++.+|.++++.+.++ +.++|.+++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~------~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~   71 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEE------KVNAYASYATHAVIANATEENELLSLGIRNFEYVIVA   71 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHH------HHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHH------HHHHHHHhCCcceeeecccchhhhccCCccccEEEEE
Confidence            57899988 99999999999999999999988642      223333 6778899999999999888 7889987754

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.27  E-value=9.6e-07  Score=69.00  Aligned_cols=58  Identities=17%  Similarity=0.121  Sum_probs=48.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      |+++||||+++||++++++|+++|++|.+.+|+...           .....+++|+++......+...
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~   59 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVAR   59 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------ccceEeeccccchhhhHHHHHh
Confidence            789999999999999999999999999999997531           3345678999988777665543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=9.6e-07  Score=71.37  Aligned_cols=78  Identities=22%  Similarity=0.233  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc---CCCCch-hhhhhhhhc---CCcEEEEEcCCCHHHHHHHHcc---
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR---DSASNF-NFSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQ---   73 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R---~~~~~~-~~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~---   73 (231)
                      +|.|+||||+++||+++++.|.++|.+|+.+.+   +..... ..+..+.+.   ..+..+.+|++|.+++.++++.   
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            456789999999999999999999988665544   221111 111122222   4678899999999999888765   


Q ss_pred             --CCEEEEcc
Q 043777           74 --VDVRFIPS   81 (231)
Q Consensus        74 --~d~~f~ps   81 (231)
                        +|+.+...
T Consensus        82 g~idilvnna   91 (285)
T d1jtva_          82 GRVDVLVCNA   91 (285)
T ss_dssp             SCCSEEEECC
T ss_pred             cchhhhhhcc
Confidence              56666544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.10  E-value=2e-06  Score=70.02  Aligned_cols=79  Identities=16%  Similarity=0.032  Sum_probs=55.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCc-----h--hhhhhhhhcCCcEEEEEcCCCHHHHHHHHc---
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASN-----F--NFSLLRVFHSGVFDYWGLLEDEKSLLEAVK---   72 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~-----~--~~~~~~~~~~~v~~~~~D~~d~~~l~~al~---   72 (231)
                      ++|+++||||+++||++++++|+++|+.|.+.+|+....     .  ..+..+.+........+|++|.++++++++   
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            468999999999999999999999999999988864321     0  112222333334556788888877655444   


Q ss_pred             ----cCCEEEEcc
Q 043777           73 ----QVDVRFIPS   81 (231)
Q Consensus        73 ----~~d~~f~ps   81 (231)
                          .+|+.+...
T Consensus        86 ~~~G~iDiLVnNA   98 (302)
T d1gz6a_          86 DTFGRIDVVVNNA   98 (302)
T ss_dssp             HHTSCCCEEEECC
T ss_pred             HHcCCCCEEEECC
Confidence                378876644

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.01  E-value=3.7e-06  Score=65.80  Aligned_cols=36  Identities=17%  Similarity=0.066  Sum_probs=33.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +.|+|+||||+|+||+++++.|.++|++|.+++|..
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~   36 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVE   36 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            368999999999999999999999999999998865

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.97  E-value=3.2e-06  Score=66.09  Aligned_cols=36  Identities=17%  Similarity=0.208  Sum_probs=33.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..||+||||+|+||++++++|+++|++|.+++|+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~   37 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN   37 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence            358999999999999999999999999999999753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.97  E-value=3.4e-06  Score=62.99  Aligned_cols=35  Identities=23%  Similarity=0.341  Sum_probs=32.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |||.|+||+|.+|+.|++.|.++||+|.+..|+++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e   35 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREE   35 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            68999999999999999999999999999999753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.96  E-value=1.6e-05  Score=58.64  Aligned_cols=72  Identities=15%  Similarity=0.042  Sum_probs=53.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .|+|+|.|| |.+|+++++.|.++||+|+++.|+..   +++.+..-.........+..+.......+...|....
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~---~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLE---SAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVIS   73 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHH---HHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChH---HHHHHHhcccccccccccccchhhhHhhhhccceeEe
Confidence            479999997 99999999999999999999999753   2222222114444555677778888888888777554

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.91  E-value=5.7e-06  Score=65.09  Aligned_cols=35  Identities=17%  Similarity=0.145  Sum_probs=32.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|.|+||||+++||++++++|+++|++|.+++|+.
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            35889999999999999999999999999999875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=97.90  E-value=7.3e-06  Score=65.41  Aligned_cols=76  Identities=18%  Similarity=0.049  Sum_probs=50.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCch--hhhhhhhhc-CCcEE-----------------EEEcCCCH
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNF--NFSLLRVFH-SGVFD-----------------YWGLLEDE   64 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~--~~~~~~~~~-~~v~~-----------------~~~D~~d~   64 (231)
                      ..++||||+++||++++++|+++|++|.+..|+.....  ..+.+.... .....                 ..+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            46799999999999999999999999999888653211  111111111 22223                 34568888


Q ss_pred             HHHHHHHc-------cCCEEEEc
Q 043777           65 KSLLEAVK-------QVDVRFIP   80 (231)
Q Consensus        65 ~~l~~al~-------~~d~~f~p   80 (231)
                      +++.++++       .+|+....
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnn  105 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNN  105 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEec
Confidence            88877664       47876653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.84  E-value=8.2e-06  Score=64.44  Aligned_cols=35  Identities=23%  Similarity=0.302  Sum_probs=32.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..+|||||+++||++++++|+++|++|++++|+..
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~   36 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE   36 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch
Confidence            36799999999999999999999999999999863

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.76  E-value=1.2e-06  Score=69.37  Aligned_cols=71  Identities=20%  Similarity=0.003  Sum_probs=48.1

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc-------cCCEEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK-------QVDVRF   78 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~-------~~d~~f   78 (231)
                      +++||||+++||+.++++|.++|++|.+.+|+...   .+.++...  .....+|++|.+++.++++       .+|+.+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~---~~~~~~~~--~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ---KDELEAFA--ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGS---HHHHHHHH--HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHhhh--CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            68999999999999999999999999999887532   11111111  1123467776665554443       478876


Q ss_pred             Ecc
Q 043777           79 IPS   81 (231)
Q Consensus        79 ~ps   81 (231)
                      ...
T Consensus        77 nNA   79 (252)
T d1zmta1          77 SND   79 (252)
T ss_dssp             EEC
T ss_pred             ECC
Confidence            543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.00021  Score=51.58  Aligned_cols=73  Identities=11%  Similarity=0.005  Sum_probs=55.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHH-ccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAV-KQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al-~~~d~~f~p   80 (231)
                      -+|+|+|. |.+|+.+++.|.+.|++++++..++..  ......... .++.++.||.+|++.+.++- +.++.+++.
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~--~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPED--DIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH--HHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchh--HHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence            46899998 999999999999999999999876521  111222333 78999999999999987764 557876654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00065  Score=46.40  Aligned_cols=67  Identities=16%  Similarity=0.149  Sum_probs=52.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc--cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK--QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~--~~d~~f   78 (231)
                      ..||.|.|| |++|+-++.+..+.|+++++++.+... | +.     ...-..+.+|+.|.+.+.+...  ++|++-
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~-P-A~-----~va~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADA-P-AM-----HVAHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTC-G-GG-----GGSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCC-c-hh-----hcCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            368999997 999999999999999999999886542 2 11     1122567899999999998875  468753

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.31  E-value=7.5e-05  Score=55.28  Aligned_cols=73  Identities=21%  Similarity=0.096  Sum_probs=48.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh------cCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF------HSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~------~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      .|||.|+|| |.+|..++..|.++||+|.++.|+...   .+.....      ..+............++.++++++|++
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~i   76 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQR---IKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVI   76 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH---HHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEE
Confidence            379999998 999999999999999999999997421   1111110      011222221221223467889999998


Q ss_pred             EEc
Q 043777           78 FIP   80 (231)
Q Consensus        78 f~p   80 (231)
                      ++.
T Consensus        77 ii~   79 (184)
T d1bg6a2          77 LIV   79 (184)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            864

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.29  E-value=0.00014  Score=52.52  Aligned_cols=36  Identities=25%  Similarity=0.406  Sum_probs=33.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +++|+|+||.|.+|+.+++.|.++||+|.+++|+..
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            468999999999999999999999999999999763

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.29  E-value=0.00011  Score=58.76  Aligned_cols=35  Identities=9%  Similarity=0.110  Sum_probs=32.1

Q ss_pred             CCeEEEEcCCC--hhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIG--RIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG--~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+++||||+|  +||+.++++|+++|++|.+..|+.
T Consensus         8 gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~   44 (297)
T d1d7oa_           8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence            68999999987  899999999999999999998853

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00013  Score=52.99  Aligned_cols=35  Identities=20%  Similarity=0.353  Sum_probs=32.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSAS   40 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~   40 (231)
                      |||+|+|+ |.+|+.++..|.+.|++|+++.|....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            78999998 999999999999999999999998643

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00027  Score=45.06  Aligned_cols=36  Identities=19%  Similarity=0.248  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..+|+|+||+|.+|...++.+...|++|++.+++++
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~   67 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES   67 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHH
Confidence            468999999999999999988889999999998753

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.0022  Score=47.39  Aligned_cols=81  Identities=14%  Similarity=0.117  Sum_probs=59.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchh-hhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFN-FSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~-~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +++|+|.|+ |+.|++++.+|.+.|. .+++..|+.....+ ....+.+.  ........++.+.+.+.+.+..+|.+.-
T Consensus        18 ~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN   96 (182)
T d1vi2a1          18 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTN   96 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceecc
Confidence            579999998 8999999999999986 57888887543111 11122232  3345667899999999999999999887


Q ss_pred             cccCCC
Q 043777           80 PSEYGA   85 (231)
Q Consensus        80 ps~~g~   85 (231)
                      ....|.
T Consensus        97 ~Tp~G~  102 (182)
T d1vi2a1          97 GTKVGM  102 (182)
T ss_dssp             CSSTTS
T ss_pred             ccCCcc
Confidence            655554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.04  E-value=0.00025  Score=52.74  Aligned_cols=74  Identities=14%  Similarity=0.095  Sum_probs=49.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhh---c-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVF---H-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~---~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |+|.|.|| |..|.+++..|.++|++|.++.|...... .+.+..-   . .+......++.-..++.++++++|.+++.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~-~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a   78 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEI-LKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG   78 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHH-HHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHH-HHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence            78999998 99999999999999999999998542110 0011000   0 11111122333456789999999998763

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.96  E-value=0.00063  Score=48.80  Aligned_cols=74  Identities=18%  Similarity=0.195  Sum_probs=48.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch-hhhhhhh---hcCCcEEEEEcCCCHHHHHHHHccC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF-NFSLLRV---FHSGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~-~~~~~~~---~~~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      |.++|||.|+|+ |++|+.++..|+.+|  .++.+++++..... .+..+.+   +.....+..+|+       +.++++
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~a   73 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDA   73 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccc
Confidence            667889999996 999999999999987  47888887642100 1111111   113344555554       356899


Q ss_pred             CEEEEccc
Q 043777           75 DVRFIPSE   82 (231)
Q Consensus        75 d~~f~ps~   82 (231)
                      |++++...
T Consensus        74 divvitag   81 (146)
T d1ez4a1          74 DLVVITAG   81 (146)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEecc
Confidence            99887543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.95  E-value=0.005  Score=44.35  Aligned_cols=62  Identities=18%  Similarity=0.176  Sum_probs=45.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |||.|+|- |.+|+.+++.|+++|++|++.+|+.+   +.   +.+. .+...       .++..++++++|++++.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~---~~---~~~~~~~~~~-------~~~~~e~~~~~d~ii~~   63 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPE---AI---ADVIAAGAET-------ASTAKAIAEQCDVIITM   63 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH---HH---HHHHHTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcc---hh---HHHHHhhhhh-------cccHHHHHhCCCeEEEE
Confidence            68999996 99999999999999999999988742   11   2222 33332       12356677889988753

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.87  E-value=0.00095  Score=49.38  Aligned_cols=33  Identities=21%  Similarity=0.124  Sum_probs=26.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~   37 (231)
                      +||.|.||||++|+.+++.|.+.. .++..+..+
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            489999999999999999888754 455555433

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.84  E-value=0.0034  Score=42.57  Aligned_cols=67  Identities=10%  Similarity=0.066  Sum_probs=47.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +++|+|.|+ |.+|..-++.|++.|..|++++...+.    +...... .++++....+.+.     -+.+++.++.+
T Consensus        12 ~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~----~~~~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~a   79 (113)
T d1pjqa1          12 DRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIP----QFTVWANEGMLTLVEGPFDET-----LLDSCWLAIAA   79 (113)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCH----HHHHHHTTTSCEEEESSCCGG-----GGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCCh----HHHHHHhcCCceeeccCCCHH-----HhCCCcEEeec
Confidence            689999998 999999999999999999998866532    1111112 5677777666532     24567776655

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.83  E-value=0.0038  Score=44.45  Aligned_cols=72  Identities=18%  Similarity=0.040  Sum_probs=46.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhhhhhhc--CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSLLRVFH--SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      ||.|+||+|.+|++++-.|..+|.  ++..++.+..   +.+.+ .+.  .-..... ......+..++++++|++.+..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~---~~~a~-Dl~~~~~~~~~~-~~~~~~~~~~~~~~aDivVita   76 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT---PGVAA-DLSHIETRATVK-GYLGPEQLPDCLKGCDVVVIPA   76 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH---HHHHH-HHTTSSSSCEEE-EEESGGGHHHHHTTCSEEEECC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc---chhhH-HHhhhhhhcCCC-eEEcCCChHHHhCCCCEEEECC
Confidence            799999999999999999988874  4667765432   12111 221  1111112 2224567778999999998865


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        77 g   77 (144)
T d1mlda1          77 G   77 (144)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.81  E-value=0.00081  Score=51.50  Aligned_cols=37  Identities=30%  Similarity=0.372  Sum_probs=33.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |.+.+||+|+|| |..|...+..|.++|++|+++.|..
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            455789999998 9999999999999999999999864

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0045  Score=40.38  Aligned_cols=69  Identities=19%  Similarity=0.159  Sum_probs=47.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEccc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPSE   82 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps~   82 (231)
                      +++|+|.|. |-.|.++++.|.++|++|++.+.+....    ....+...+.+..+.. +.    ..+.++|.+++...
T Consensus         5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~----~~~~~~~~~~~~~~~~-~~----~~~~~~d~vi~SPG   73 (93)
T d2jfga1           5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPP----GLDKLPEAVERHTGSL-ND----EWLMAADLIVASPG   73 (93)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCT----TGGGSCTTSCEEESBC-CH----HHHHHCSEEEECTT
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCch----hHHHHhhccceeeccc-ch----hhhccCCEEEECCC
Confidence            678999998 8899999999999999999999865421    1122234444544443 22    23567888877544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.70  E-value=0.00078  Score=48.94  Aligned_cols=33  Identities=24%  Similarity=0.332  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |||.|+|+ |.+|+.+++.|.++|++|++++|+.
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCc
Confidence            68999987 9999999999999999999998874

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.69  E-value=0.00052  Score=49.66  Aligned_cols=28  Identities=36%  Similarity=0.446  Sum_probs=25.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG   28 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g   28 (231)
                      |++++||.|+||+|++|++++-.|...+
T Consensus         1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           1 MKAPVRVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             CCCCEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhcc
Confidence            8888899999999999999999988765

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.68  E-value=0.0021  Score=47.01  Aligned_cols=72  Identities=17%  Similarity=0.137  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      +..+|+|+||+|.+|...++.+...|.+|++.+++.+.   .+.++.+  ++..+ .|+.+...-....+++|++|-.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~---~~~~~~l--Ga~~~-i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEK---LALPLAL--GAEEA-ATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGG---SHHHHHT--TCSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccc---ccccccc--cccee-eehhhhhhhhhccccccccccc
Confidence            45789999999999999999988999999998886432   2233333  33322 3555544333444568887743

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.67  E-value=0.0011  Score=46.09  Aligned_cols=66  Identities=20%  Similarity=0.166  Sum_probs=49.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHH-HccCCEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEA-VKQVDVRFI   79 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~a-l~~~d~~f~   79 (231)
                      +.++|+|. |.+|+.+++.|.  ++.+.++..++..   .   +... .++.++.||.++++.|.++ +.+++...+
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~---~---~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~   68 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENV---R---KKVLRSGANFVHGDPTRVSDLEKANVRGARAVIV   68 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTH---H---HHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHH---H---HHHHhcCccccccccCCHHHHHHhhhhcCcEEEE
Confidence            46899997 899999999984  5678888766431   1   2223 7899999999999999875 345666554

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.65  E-value=0.0028  Score=43.16  Aligned_cols=35  Identities=23%  Similarity=0.367  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +++++|.|| |++|-.++..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478999998 99999999999999999999998753

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.63  E-value=0.0029  Score=43.32  Aligned_cols=34  Identities=15%  Similarity=0.329  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|.|| |++|-.++..|.+.|.+|+++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            578999998 9999999999999999999999865

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.60  E-value=0.0013  Score=48.60  Aligned_cols=24  Identities=29%  Similarity=0.277  Sum_probs=21.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY   27 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~   27 (231)
                      ..||.|+||+|+||++++-.|.+.
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g   47 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASG   47 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcC
Confidence            447999999999999999988875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.59  E-value=0.0027  Score=43.75  Aligned_cols=35  Identities=17%  Similarity=0.227  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +++++|.|| |+||-.++..|.+.|.+|+++.|.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            578999998 99999999999999999999998753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.58  E-value=0.00057  Score=51.19  Aligned_cols=75  Identities=12%  Similarity=0.096  Sum_probs=48.5

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhh------hcCCcEEEEEcCCCHHHHHHHHccC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRV------FHSGVFDYWGLLEDEKSLLEAVKQV   74 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~------~~~~v~~~~~D~~d~~~l~~al~~~   74 (231)
                      |..++||+|.|| |..|.+++..|.+.|++|.++.|+...   .+.+..      +-+++.+ .-++.-..++.++++++
T Consensus         4 ~~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~---~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~a   78 (189)
T d1n1ea2           4 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEE---VRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGA   78 (189)
T ss_dssp             CCCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHH---HHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTC
T ss_pred             cceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHH---HHHHhhccccccccccccc-ccccccchhhhhccCCC
Confidence            333568999998 999999999999999999999987421   111110      0012221 11111123578889999


Q ss_pred             CEEEEc
Q 043777           75 DVRFIP   80 (231)
Q Consensus        75 d~~f~p   80 (231)
                      |.+++.
T Consensus        79 d~iiia   84 (189)
T d1n1ea2          79 EIILFV   84 (189)
T ss_dssp             SCEEEC
T ss_pred             CEEEEc
Confidence            998763

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.55  E-value=0.00086  Score=47.94  Aligned_cols=34  Identities=26%  Similarity=0.236  Sum_probs=27.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC---CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH---PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~---~v~~~~R~   37 (231)
                      +|+|.|.||||++|+.+++.|.+.+|   ++..++.+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            57899999999999999998876654   45555443

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.51  E-value=0.0021  Score=46.60  Aligned_cols=68  Identities=22%  Similarity=0.302  Sum_probs=49.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhh-hhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNF-SLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~-~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .++|+|+|+ |.+|+.+++.|.+.|. ++++..|...   ++ ++...+  +...     .+.+++.+++.++|+++...
T Consensus        24 ~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~---ka~~l~~~~--~~~~-----~~~~~~~~~l~~~Divi~at   92 (159)
T d1gpja2          24 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYE---RAVELARDL--GGEA-----VRFDELVDHLARSDVVVSAT   92 (159)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHH---HHHHHHHHH--TCEE-----CCGGGHHHHHHTCSEEEECC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHH---HHHHHHHhh--hccc-----ccchhHHHHhccCCEEEEec
Confidence            678999998 9999999999999997 4778877632   22 122222  2222     34568888999999988754


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        93 s   93 (159)
T d1gpja2          93 A   93 (159)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.46  E-value=0.0025  Score=46.93  Aligned_cols=35  Identities=20%  Similarity=0.157  Sum_probs=31.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..+|+|+||+|.+|...++.....|.+|++++|+.
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~   64 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD   64 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCH
Confidence            56899999999999999999999999999999864

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.0012  Score=47.37  Aligned_cols=67  Identities=21%  Similarity=0.150  Sum_probs=39.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC-C---CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG-H---PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g-~---~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ++|.|.||||.+|+.+++.|++.. +   +++.+.++.+....   . .+. .-.....+..+.+    .++++|+.|..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~---~-~~~-~~~~~~~~~~~~~----~~~~~DivF~a   72 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA---P-SFG-GTTGTLQDAFDLE----ALKALDIIVTC   72 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC---C-GGG-TCCCBCEETTCHH----HHHTCSEEEEC
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccc---c-ccc-CCceeeecccchh----hhhcCcEEEEe
Confidence            489999999999999999888763 3   34555554332100   0 111 1111222333433    45789998865

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.38  E-value=0.0029  Score=43.56  Aligned_cols=34  Identities=21%  Similarity=0.344  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|.|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            578999998 9999999999999999999999875

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.37  E-value=0.0014  Score=48.38  Aligned_cols=31  Identities=26%  Similarity=0.230  Sum_probs=25.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC-CCCEEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY-GHPKFALI   35 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~   35 (231)
                      ++|.|.||||++|+.+++.|.+. ..++..+.
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            59999999999999999999886 35665443

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.36  E-value=0.0062  Score=41.86  Aligned_cols=33  Identities=18%  Similarity=0.256  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            468999998 999999999999999999999875

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.33  E-value=0.0059  Score=41.73  Aligned_cols=35  Identities=26%  Similarity=0.233  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +++++|.|| |+||-.++..|.+.|.+|+++.|...
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            478999998 99999999999999999999998753

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.30  E-value=0.0038  Score=43.52  Aligned_cols=59  Identities=15%  Similarity=0.139  Sum_probs=41.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEE-cCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALI-RDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~-R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      |||.|.|++|..|+.|.+.+.+.|+++.... ++..        ..+ .... +..|++.++.+.+.++-
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--------~~~-~~~D-VvIDFS~p~~~~~~l~~   60 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--------EEL-DSPD-VVIDFSSPEALPKTVDL   60 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--------EEC-SCCS-EEEECSCGGGHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--------HHh-ccCC-EEEEecCHHHHHHHHHH
Confidence            6899999999999999999888998876543 2211        111 1222 45689888877666653

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0053  Score=42.33  Aligned_cols=34  Identities=21%  Similarity=0.334  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++++|.|| |++|-.++..|.+.|.+|+++.|..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478999998 9999999999999999999999975

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.25  E-value=0.0017  Score=46.51  Aligned_cols=24  Identities=25%  Similarity=0.325  Sum_probs=21.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG   28 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g   28 (231)
                      |||.|.||||++|+.+++.|++..
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~   24 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEER   24 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTT
T ss_pred             CEEEEECCccHHHHHHHHHHHhcC
Confidence            689999999999999999988753

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0026  Score=47.58  Aligned_cols=34  Identities=24%  Similarity=0.347  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      -++|.|.|| |.+|+.|+..++..|++|++++++.
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTE   37 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCh
Confidence            479999998 9999999999999999999999875

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0044  Score=45.14  Aligned_cols=69  Identities=17%  Similarity=0.195  Sum_probs=45.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHH---HHHcc--CCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLL---EAVKQ--VDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~---~al~~--~d~~f   78 (231)
                      ..+|||+||+|.+|...++.+...|.+|++++++..   +.+..+++  ++..+ .|.++.+..+   +...+  +|+++
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~---~~~~~~~~--Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE---GQKIVLQN--GAHEV-FNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHT--TCSEE-EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CCEEEEEeccccccccccccccccCccccccccccc---cccccccc--Ccccc-cccccccHHHHhhhhhccCCceEEe
Confidence            568999999999999999999899999999987532   22333333  33322 3666654333   33332  56555

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.13  E-value=0.029  Score=39.64  Aligned_cols=76  Identities=18%  Similarity=0.050  Sum_probs=42.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHh-CC--CCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIE-YG--HPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~-~g--~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      |||.|+||+|.+|++++-.|.. .+  .++..++..+.....+..+.+.........  +..... .++++++|++++.+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~--~~~~~~-~~~~~~aDvvvita   77 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDA-TPALEGADVVLISA   77 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE--ECSSCC-HHHHTTCSEEEECC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE--EEcCCC-ccccCCCCEEEECC
Confidence            6899999999999999987754 34  567777764311001111111111111111  111222 34688999998865


Q ss_pred             cC
Q 043777           82 EY   83 (231)
Q Consensus        82 ~~   83 (231)
                      ..
T Consensus        78 G~   79 (145)
T d2cmda1          78 GV   79 (145)
T ss_dssp             SC
T ss_pred             Cc
Confidence            43

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.02  E-value=0.0031  Score=46.75  Aligned_cols=33  Identities=18%  Similarity=0.180  Sum_probs=26.4

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALI   35 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~   35 (231)
                      ++.||.|.||||++|+.+++.|.+.. .++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            46789999999999999999888764 3555444

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.01  E-value=0.0052  Score=42.27  Aligned_cols=34  Identities=26%  Similarity=0.274  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            468999998 9999999999999999999998865

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.00  E-value=0.0043  Score=42.25  Aligned_cols=34  Identities=24%  Similarity=0.221  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            478999998 9999999999999999999999875

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.94  E-value=0.0049  Score=42.41  Aligned_cols=35  Identities=26%  Similarity=0.251  Sum_probs=32.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +++++|.|| |++|-.++..|.+.|.+|+++.|...
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            578999998 99999999999999999999998753

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.93  E-value=0.0046  Score=44.39  Aligned_cols=26  Identities=31%  Similarity=0.433  Sum_probs=22.3

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPK   31 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v   31 (231)
                      +|.|.||||++|+.+++.|.+..+.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~   28 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPI   28 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCE
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCc
Confidence            79999999999999999887775543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.90  E-value=0.0038  Score=45.73  Aligned_cols=70  Identities=23%  Similarity=0.214  Sum_probs=46.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHH---HHHHHHc--cCCEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK---SLLEAVK--QVDVRF   78 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~---~l~~al~--~~d~~f   78 (231)
                      +.+|||+||+|.+|...++.+...|..|.+.+++.+   +.+.++.  .++..+ .|..+++   .+.+...  ++|++|
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~---~~~~l~~--~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~   99 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA---KREMLSR--LGVEYV-GDSRSVDFADEILELTDGYGVDVVL   99 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHH---HHHHHHT--TCCSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccc---ccccccc--cccccc-ccCCccCHHHHHHHHhCCCCEEEEE
Confidence            568999999999999999988889999999887642   2333333  343332 3555543   3333332  367766


Q ss_pred             E
Q 043777           79 I   79 (231)
Q Consensus        79 ~   79 (231)
                      -
T Consensus       100 d  100 (183)
T d1pqwa_         100 N  100 (183)
T ss_dssp             E
T ss_pred             e
Confidence            4

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.89  E-value=0.0046  Score=44.02  Aligned_cols=74  Identities=22%  Similarity=0.092  Sum_probs=46.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCch---hhhhhhh---hc-CCcEEEEEcCCCHHHHHHHHccCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNF---NFSLLRV---FH-SGVFDYWGLLEDEKSLLEAVKQVD   75 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~---~~~~~~~---~~-~~v~~~~~D~~d~~~l~~al~~~d   75 (231)
                      |||.|+||+|.+|+.++..|..++  .++.+++++.....   .+..+.+   .. ..+++...--.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            689999999999999999999888  47888887642110   1111111   11 3344433222233    4678999


Q ss_pred             EEEEccc
Q 043777           76 VRFIPSE   82 (231)
Q Consensus        76 ~~f~ps~   82 (231)
                      ++.+...
T Consensus        77 vVVitAG   83 (145)
T d1hyea1          77 VVIITSG   83 (145)
T ss_dssp             EEEECCS
T ss_pred             EEEEecc
Confidence            9888644

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.87  E-value=0.0059  Score=42.63  Aligned_cols=35  Identities=23%  Similarity=0.323  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..++++|.|| |++|-.++..|.+.|.+|+++.|..
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            3578999998 9999999999999999999999875

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.80  E-value=0.0044  Score=50.07  Aligned_cols=35  Identities=9%  Similarity=0.090  Sum_probs=30.6

Q ss_pred             CCeEEEEc--CCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIG--AIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtG--atG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .+.+||||  ++.+||+.|+++|.++|.+|.+..|..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~   38 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence            57899999  446999999999999999999887754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.74  E-value=0.0043  Score=44.38  Aligned_cols=64  Identities=13%  Similarity=0.126  Sum_probs=44.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |||.+.|+ |.+|+++++.|++.|+++++..|+...  ..+..+.+  ++.+       ..+..++++++|++|+.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~--~~~l~~~~--g~~~-------~~~~~~~~~~~dvIila   64 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLER--SKEIAEQL--ALPY-------AMSHQDLIDQVDLVILG   64 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHH--HHHHHHHH--TCCB-------CSSHHHHHHTCSEEEEC
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHh--HHhhcccc--ceee-------echhhhhhhccceeeee
Confidence            68999986 999999999999999999998886421  11111222  2221       12356677899999874

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=95.73  E-value=0.0057  Score=44.59  Aligned_cols=57  Identities=12%  Similarity=0.101  Sum_probs=40.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHH
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEK   65 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~   65 (231)
                      +..+|+|+||+|.+|...++.+...|.+|++.+++..   +.+.++.+  ++.. ..|..+++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~---k~~~~~~l--Ga~~-vi~~~~~d   84 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQ---KAQSALKA--GAWQ-VINYREED   84 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHH---HHHHHHHH--TCSE-EEETTTSC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchH---HHHHHHhc--CCeE-EEECCCCC
Confidence            3568999999999999999998889999999988753   23333343  3332 23666654

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.71  E-value=0.028  Score=39.61  Aligned_cols=70  Identities=16%  Similarity=-0.003  Sum_probs=43.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCch-hhh--hhhh---hcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNF-NFS--LLRV---FHSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~-~~~--~~~~---~~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      ||.|+||+|.+|+.++..|..++.  ++.+++.+..... +..  .+.+   +.....+..+|+   +    .++++|++
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCEE
Confidence            899999999999999999999884  4666664322111 111  1111   223444444443   2    46799998


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      .+...
T Consensus        75 vitaG   79 (142)
T d1o6za1          75 VITAG   79 (142)
T ss_dssp             EECCC
T ss_pred             EEecc
Confidence            87644

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.70  E-value=0.0059  Score=41.90  Aligned_cols=33  Identities=24%  Similarity=0.373  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++++|.|| |++|-.++..|.+.|++|+++.|.+
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            68999998 9999999999999999999998864

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.69  E-value=0.0052  Score=44.37  Aligned_cols=33  Identities=15%  Similarity=0.179  Sum_probs=30.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++|.++|- |.+|+.+++.|+++||+|.++.|+.
T Consensus         2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~   34 (162)
T d3cuma2           2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQ   34 (162)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECch
Confidence            48999985 9999999999999999999998874

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.65  E-value=0.006  Score=44.58  Aligned_cols=34  Identities=24%  Similarity=0.287  Sum_probs=31.1

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |||.|+|- |.+|..+++.|++.||+|.+.+|+.+
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~   35 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYS   35 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            78999996 99999999999999999999998753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.64  E-value=0.0053  Score=43.77  Aligned_cols=63  Identities=17%  Similarity=0.058  Sum_probs=42.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |||.|+|. |.+|+.+++.|+++|++|.+..|..+..  ... ..  .++.+.  +     +..++++++|.+|+.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~--~~~-~~--~~~~~~--~-----~~~e~~~~~diIi~~   63 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPS--TIE-RA--RTVGVT--E-----TSEEDVYSCPVVISA   63 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHH--HHH-HH--HHHTCE--E-----CCHHHHHTSSEEEEC
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHH--HHH-hh--hccccc--c-----cHHHHHhhcCeEEEE
Confidence            68999986 9999999999999999998887765321  111 11  111111  1     234678889998864

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=95.64  E-value=0.023  Score=43.22  Aligned_cols=67  Identities=10%  Similarity=0.066  Sum_probs=47.2

Q ss_pred             CCeEEEEcC----------------CChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHH
Q 043777            4 KSNVLVIGA----------------IGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSL   67 (231)
Q Consensus         4 ~~~ilVtGa----------------tG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l   67 (231)
                      +++||||+|                ||..|.+|++++..+|++|+++.-+.+..        .+.++..+.  +...+++
T Consensus         6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--------~p~~~~~~~--~~t~~~m   75 (223)
T d1u7za_           6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------TPPFVKRVD--VMTALEM   75 (223)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------CCTTEEEEE--CCSHHHH
T ss_pred             CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--------cccccccce--ehhhHHH
Confidence            678888875                89999999999999999999998765321        114455544  3444444


Q ss_pred             ----HHHHccCCEEEEc
Q 043777           68 ----LEAVKQVDVRFIP   80 (231)
Q Consensus        68 ----~~al~~~d~~f~p   80 (231)
                          .+.++++|+.+..
T Consensus        76 ~~~~~~~~~~~D~~i~a   92 (223)
T d1u7za_          76 EAAVNASVQQQNIFIGC   92 (223)
T ss_dssp             HHHHHHHGGGCSEEEEC
T ss_pred             HHHHHhhhccceeEeee
Confidence                4445678887764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.63  E-value=0.0049  Score=46.17  Aligned_cols=32  Identities=16%  Similarity=0.200  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      |||.|.|. |++|..++..|.+.|++|++++.+
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n   32 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVS   32 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSC
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCC
Confidence            68999986 999999999999999999999865

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.63  E-value=0.023  Score=40.33  Aligned_cols=71  Identities=18%  Similarity=0.204  Sum_probs=45.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCc-hhhhhhhh---hc-CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASN-FNFSLLRV---FH-SGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~-~~~~~~~~---~~-~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      .+||.|+|| |++|+.++..|+.++.  ++.+++++.+.. ..+..+.+   +. ..+.+...|+       +.++++|+
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daDv   77 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDADL   77 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCSE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhcccee
Confidence            468999997 9999999999998874  577777764320 01111111   11 3344444443       45788999


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +.+...
T Consensus        78 vvitag   83 (148)
T d1ldna1          78 VVICAG   83 (148)
T ss_dssp             EEECCS
T ss_pred             EEEecc
Confidence            887543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.63  E-value=0.0049  Score=43.97  Aligned_cols=33  Identities=18%  Similarity=0.300  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~   38 (231)
                      |+|.++|+ |.+|+++++.|++.| +++.+..|+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~   34 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGA   34 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCCh
Confidence            68999997 999999999999887 8899888874

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.60  E-value=0.0061  Score=41.32  Aligned_cols=34  Identities=18%  Similarity=0.278  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++++|.|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            478999998 9999999999999999999998865

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.58  E-value=0.0066  Score=44.19  Aligned_cols=35  Identities=26%  Similarity=0.212  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..|||+||+|.+|...++-....|..|++.+|+..
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~   59 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE   59 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHH
Confidence            46999999999999999888888999999999764

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.57  E-value=0.017  Score=42.03  Aligned_cols=71  Identities=10%  Similarity=0.090  Sum_probs=47.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +.+|.++|- |.+|+.+++.|+++||+|+++.|+.+.   .+.+..-........ -....+++.+++..+|.++.
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~---~~~l~~~~~~~~~~~-~a~~~~~~~~~~~~~~~ii~   72 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSK---VDDFLANEAKGTKVL-GAHSLEEMVSKLKKPRRIIL   72 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHH---HHHHHHTTTTTSSCE-ECSSHHHHHHHBCSSCEEEE
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHH---HHHHHHhcccccccc-chhhhhhhhhhhcccceEEE
Confidence            357999997 999999999999999999999997632   111111110000011 13466777788888877654

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=95.54  E-value=0.0074  Score=43.87  Aligned_cols=34  Identities=18%  Similarity=0.116  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++|+|.|| |+.+++++.+|.+.|.+++++.|+.
T Consensus        18 ~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~   51 (170)
T d1nyta1          18 GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV   51 (170)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCEEEEECC-cHHHHHHHHHhcccceEEEeccchH
Confidence            579999998 9999999999999999899998875

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.42  E-value=0.0078  Score=44.18  Aligned_cols=36  Identities=28%  Similarity=0.244  Sum_probs=32.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..+|||+||+|.+|...++-....|..|++.+++..
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~   67 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA   67 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchH
Confidence            357999999999999999988899999999998764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.39  E-value=0.0064  Score=45.00  Aligned_cols=34  Identities=24%  Similarity=0.287  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      -++|.|.|| |.+|+.++..++..|++|++++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINE   37 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            468999998 9999999999999999999999875

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.37  E-value=0.0096  Score=43.48  Aligned_cols=35  Identities=11%  Similarity=0.148  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~   39 (231)
                      ++||+|+|| |..|...+..|.++|+ +|+++.|...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            579999998 9999999999999998 5999988753

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.37  E-value=0.014  Score=40.28  Aligned_cols=34  Identities=21%  Similarity=0.239  Sum_probs=31.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|.|| |+||-.++..|.+.|.+|+++.|.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            478999998 9999999999999999999998865

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.35  E-value=0.026  Score=40.56  Aligned_cols=70  Identities=14%  Similarity=0.112  Sum_probs=50.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ..+|+|.|+ |.+|...+..+...|..+++++++..   +.+..+.+.  ... ..|..+.+......+++|+++-.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~---~~~~a~~lG--ad~-~i~~~~~~~~~~~~~~~D~vid~  100 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEA---KREAAKALG--ADE-VVNSRNADEMAAHLKSFDFILNT  100 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGG---GHHHHHHHT--CSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchh---HHHHHhccC--CcE-EEECchhhHHHHhcCCCceeeee
Confidence            568999986 99999999888889999988887653   223333433  222 24777887777777778887754

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.23  E-value=0.0098  Score=43.12  Aligned_cols=35  Identities=17%  Similarity=0.194  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      ++++|+|.|+ |+.|++++.+|.+.|. ++.++.|+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccH
Confidence            3578999998 8899999999999995 788888864

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=95.20  E-value=0.011  Score=42.28  Aligned_cols=37  Identities=16%  Similarity=0.066  Sum_probs=29.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      |.+++||.|+|+ |.+|+.++..|..++. ++.+++.+.
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~   41 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVK   41 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEecc
Confidence            456789999997 9999999988887774 677776654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.17  E-value=0.0099  Score=43.62  Aligned_cols=35  Identities=20%  Similarity=0.250  Sum_probs=31.7

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      .+|+|+||+|.+|...++-....|.+|++++|+..
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~   67 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES   67 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchh
Confidence            37999999999999999988899999999998753

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.15  E-value=0.004  Score=44.71  Aligned_cols=27  Identities=30%  Similarity=0.329  Sum_probs=23.4

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCC
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYG   28 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g   28 (231)
                      ++++||.|+||+|.+|++++-.|.+.+
T Consensus         1 s~p~KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           1 SEPIRVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             CCCEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred             CCceEEEEECCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999887654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.07  E-value=0.022  Score=37.32  Aligned_cols=70  Identities=17%  Similarity=0.162  Sum_probs=45.7

Q ss_pred             CCCCCeEEEEcCCChhH-HHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            1 MAGKSNVLVIGAIGRIG-YHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG-~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      |...++|.+.|- |++| +.+++.|.++|++|...++..+  +..   +.+. .++.+..+.-  ++    .++++|.+.
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~--~~~---~~L~~~Gi~v~~g~~--~~----~i~~~d~vV   72 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADG--VVT---QRLAQAGAKIYIGHA--EE----HIEGASVVV   72 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCS--HHH---HHHHHTTCEEEESCC--GG----GGTTCSEEE
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCC--hhh---hHHHHCCCeEEECCc--cc----cCCCCCEEE
Confidence            455689999997 5566 6778999999999999998753  211   2222 6777665432  22    235677766


Q ss_pred             Eccc
Q 043777           79 IPSE   82 (231)
Q Consensus        79 ~ps~   82 (231)
                      ..+.
T Consensus        73 ~S~A   76 (96)
T d1p3da1          73 VSSA   76 (96)
T ss_dssp             ECTT
T ss_pred             ECCC
Confidence            5544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.06  E-value=0.015  Score=41.91  Aligned_cols=32  Identities=25%  Similarity=0.439  Sum_probs=26.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCC--EEEEEcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHP--KFALIRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~--v~~~~R~   37 (231)
                      ++|+|+|. |.+|.++++.|.+.|+.  |++.+|+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~   35 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDIN   35 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECC
Confidence            47999986 99999999999999975  5555554

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.06  E-value=0.041  Score=38.50  Aligned_cols=70  Identities=19%  Similarity=0.198  Sum_probs=43.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhh---hhhh--hcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFS---LLRV--FHSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~---~~~~--~~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      |||.|+|| |.+|+.++..|+.++  .++..++++... .+.+   +...  +.....+..+|+       ++++++|++
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~-~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adiv   71 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKR-AEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVV   71 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH-HHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeccccc-ccchhccccccccccccccccCCcH-------HHhcCCCEE
Confidence            68999997 999999998888877  357777765421 1111   1111  113344443332       357899998


Q ss_pred             EEcccC
Q 043777           78 FIPSEY   83 (231)
Q Consensus        78 f~ps~~   83 (231)
                      ++....
T Consensus        72 vitag~   77 (140)
T d1a5za1          72 IVAAGV   77 (140)
T ss_dssp             EECCCC
T ss_pred             EEeccc
Confidence            886544

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.03  E-value=0.01  Score=42.12  Aligned_cols=33  Identities=21%  Similarity=0.352  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +++|||+|| |.+|..-++.|++.|.+|++++-.
T Consensus        13 gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          13 DKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             TCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            689999999 999999999999999999999754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.00  E-value=0.014  Score=46.70  Aligned_cols=35  Identities=26%  Similarity=0.398  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      +|||+|+|| |.-|...+..|.++|++|.++-++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            589999998 99999999999999999999988753

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=94.97  E-value=0.06  Score=37.74  Aligned_cols=70  Identities=19%  Similarity=0.063  Sum_probs=41.8

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCC-chhhhhhhh-hc--CCcEEEEEcCCCHHHHHHHHccCCEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSAS-NFNFSLLRV-FH--SGVFDYWGLLEDEKSLLEAVKQVDVRF   78 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~-~~~~~~~~~-~~--~~v~~~~~D~~d~~~l~~al~~~d~~f   78 (231)
                      +||.|+|+ |.+|+.++-.|+.++.  ++.+++++... ...+..+.+ ..  .......+|       .+.++++|++.
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            58999997 9999999999998874  68888876543 111111111 11  222222232       23678999988


Q ss_pred             Eccc
Q 043777           79 IPSE   82 (231)
Q Consensus        79 ~ps~   82 (231)
                      +...
T Consensus        74 itag   77 (142)
T d1y6ja1          74 VTAG   77 (142)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            7543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.89  E-value=0.019  Score=38.89  Aligned_cols=34  Identities=21%  Similarity=0.311  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            578999998 9999999999999999999999865

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.89  E-value=0.023  Score=41.18  Aligned_cols=69  Identities=20%  Similarity=0.276  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhh-hcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRV-FHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .-+++|.|| |-.|..-++.....|..|++++++...   .+.++. +...+..   -+.+.+.+.+.++++|++.-
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~---l~~l~~~~~~~~~~---~~~~~~~l~~~~~~aDivI~  101 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVER---LSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIG  101 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH---HHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEE
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHH---HHHHHHhhccccee---ehhhhhhHHHhhccCcEEEE
Confidence            468999998 999999999999999999999987421   122222 2233333   35678899999999999764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.79  E-value=0.016  Score=46.34  Aligned_cols=38  Identities=16%  Similarity=0.218  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSA   39 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~   39 (231)
                      |-+.|+|+|+|| |.-|...+..|+++|  ++|+++-|+..
T Consensus         1 m~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           1 LPTIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            677789999998 999999999999876  58999988753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.76  E-value=0.014  Score=44.76  Aligned_cols=33  Identities=24%  Similarity=0.294  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|+|| |..|...+..|.++|++|+++-++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999998 9999999999999999999998764

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.65  E-value=0.019  Score=43.64  Aligned_cols=34  Identities=15%  Similarity=0.100  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .+||+|+|| |..|...+..|.++|++|+++-|..
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            579999998 9999999999999999999998864

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.48  E-value=0.018  Score=36.24  Aligned_cols=33  Identities=21%  Similarity=0.378  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|.|.|+ |++|+-++.+-.+.|+++++++-+.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            68999998 9999999999999999999988654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=94.41  E-value=0.044  Score=39.21  Aligned_cols=34  Identities=32%  Similarity=0.407  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..+|+|+| +|.+|...+..+...|.+|+++.++.
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~   60 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSP   60 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHH
Confidence            46899997 59999999998888999999998864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.40  E-value=0.028  Score=41.23  Aligned_cols=36  Identities=31%  Similarity=0.412  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ++++|+|+|| |..|...+..|.++||+|+++.+...
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3689999998 99999999999999999999998753

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.39  E-value=0.029  Score=40.29  Aligned_cols=69  Identities=19%  Similarity=0.101  Sum_probs=43.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCH-HHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE-KSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~l~~al~~~d~~f~   79 (231)
                      ..+|+|.|+ |.+|...+..+...|.+|++++++...   .+..+.+.  +..+ .|..+. +......++.|.++.
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k---~~~a~~lG--a~~~-i~~~~~~~~~~~~~~~~d~vi~   97 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRK---REDAMKMG--ADHY-IATLEEGDWGEKYFDTFDLIVV   97 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTT---HHHHHHHT--CSEE-EEGGGTSCHHHHSCSCEEEEEE
T ss_pred             CCEEEEECC-CCcchhHHHHhhhccccccccccchhH---HHHhhccC--CcEE-eeccchHHHHHhhhcccceEEE
Confidence            568999987 999999998888889999999987542   33333433  3222 233322 333344445676654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=94.39  E-value=0.025  Score=39.72  Aligned_cols=70  Identities=19%  Similarity=0.049  Sum_probs=44.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCCchhhhhhh-----hh-cCCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSASNFNFSLLR-----VF-HSGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~~~~~~~~~-----~~-~~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |||.|+|| |.+|+.++..|...+  .++.+++++... .+....+     .. .....+...  .|.    ++++++|+
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~-~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadv   72 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGI-PQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSH-HHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEecccccc-chhhhhhhhcccchhcccceEEec--CCH----HHhcCCeE
Confidence            68999997 999999999999887  478888876532 1111111     11 133444332  233    35789999


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +.+...
T Consensus        73 vvitag   78 (142)
T d1guza1          73 VIITAG   78 (142)
T ss_dssp             EEECCS
T ss_pred             EEEEEe
Confidence            887543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.26  E-value=0.022  Score=43.58  Aligned_cols=33  Identities=24%  Similarity=0.199  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |||+|+|| |.-|...+..|.++|++|+++-+..
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            78999998 9999999999999999999998754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.21  E-value=0.065  Score=37.98  Aligned_cols=71  Identities=17%  Similarity=0.005  Sum_probs=43.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVD   75 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d   75 (231)
                      +++|+|.|+||.||...++-+.+.  .++|.+++-+.......+....|.+. .++..|-...+.+...+.+.+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk-~v~i~d~~~~~~l~~~~~~~~   74 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAK-RAVIADPSLYNDLKEALAGSS   74 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCS-EEEESCGGGHHHHHHHTTTCS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccc-cceeccHHHHHHHHHHhhhcc
Confidence            579999999999999999888775  47788777654211122233344332 223344444555566665443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.16  E-value=0.042  Score=40.26  Aligned_cols=58  Identities=21%  Similarity=0.237  Sum_probs=44.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .+++.|.|. |.||+.+++.|..-|.+|.+.+|.....                  +..-.+++.++++.+|++.+.
T Consensus        42 gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~------------------~~~~~~~l~ell~~sDiv~~~   99 (181)
T d1qp8a1          42 GEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEG------------------PWRFTNSLEEALREARAAVCA   99 (181)
T ss_dssp             TCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCS------------------SSCCBSCSHHHHTTCSEEEEC
T ss_pred             CceEEEecc-ccccccceeeeecccccccccccccccc------------------ceeeeechhhhhhccchhhcc
Confidence            678999997 9999999999999999999998765311                  001122577899999997763

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.94  E-value=0.028  Score=43.11  Aligned_cols=32  Identities=19%  Similarity=0.214  Sum_probs=29.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      -|+|+|| |.+|..++..|.++|++|+++.|..
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4999998 9999999999999999999999864

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=93.94  E-value=0.026  Score=40.91  Aligned_cols=34  Identities=18%  Similarity=0.145  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++|+|.|+ |+.+++++.+|.+.+.+++++.|+.
T Consensus        18 ~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~   51 (171)
T d1p77a1          18 NQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF   51 (171)
T ss_dssp             TCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred             CCEEEEECC-cHHHHHHHHHHcccCceeeeccchH
Confidence            578999997 8899999999998888899999975

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.91  E-value=0.068  Score=38.02  Aligned_cols=35  Identities=20%  Similarity=0.133  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +..+|+|.|+ |.+|...+..+...|.+|+++++++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~   61 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDD   61 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchh
Confidence            3568999886 9999999988888999999988764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.87  E-value=0.024  Score=44.17  Aligned_cols=34  Identities=24%  Similarity=0.298  Sum_probs=31.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|+|| |..|...+..|.++|++|+++-+..
T Consensus        30 pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          30 PKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            578999998 9999999999999999999998764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.84  E-value=0.068  Score=37.17  Aligned_cols=60  Identities=20%  Similarity=0.160  Sum_probs=38.0

Q ss_pred             eEEEEcCCChhHHHHHHHHHhC-CCCEEE-EEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHc
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEY-GHPKFA-LIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVK   72 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~-g~~v~~-~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~   72 (231)
                      ||+|.|++|..|+.+++.+.+. ++++.. +++...    ......  .+.. +..|++.++.+.+.++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~----~~~~~~--~~~D-vvIDFS~p~~~~~~~~   62 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP----LSLLTD--GNTE-VVIDFTHPDVVMGNLE   62 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC----THHHHT--TTCS-EEEECCCTTTHHHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc----hhhhcc--ccCC-EEEEcccHHHHHHHHH
Confidence            6899999999999999988775 466553 333321    111111  2222 4568988887766554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.80  E-value=0.053  Score=38.51  Aligned_cols=35  Identities=17%  Similarity=0.231  Sum_probs=28.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~   38 (231)
                      |++|.|.|+||.||...++-+.+.  .++|.+++-+.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            358999999999999999888776  36788777654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.79  E-value=0.041  Score=39.45  Aligned_cols=34  Identities=18%  Similarity=0.225  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +++|+|.|| |++|-.++..|.+.|.+++++.+..
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            578999998 9999999999999999887776654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.74  E-value=0.036  Score=40.61  Aligned_cols=33  Identities=21%  Similarity=0.192  Sum_probs=27.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      .+|||+||+|.+|+..++-....|..+++.+..
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~   64 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG   64 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEES
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccc
Confidence            579999999999999999888899876655443

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=93.72  E-value=0.053  Score=39.31  Aligned_cols=34  Identities=18%  Similarity=0.251  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      ..+|+|+|| |.+|...+..+...|. .|++++++.
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~   63 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP   63 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred             CCEEEEECC-Cccchhheeccccccccccccccccc
Confidence            468999997 9999999999999997 688888764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.68  E-value=0.031  Score=39.71  Aligned_cols=34  Identities=15%  Similarity=0.109  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~   38 (231)
                      .+||+|.|| |++|-.++..|.+.+.  +|+++.++.
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            589999998 9999999999999885  566766554

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.48  E-value=0.0072  Score=45.55  Aligned_cols=26  Identities=38%  Similarity=0.360  Sum_probs=24.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPK   31 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v   31 (231)
                      |||+|+|| |-+|...+..|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            68999998 999999999999999864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.44  E-value=0.093  Score=35.18  Aligned_cols=34  Identities=21%  Similarity=0.168  Sum_probs=27.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh---CCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE---YGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~---~g~~v~~~~R~~   38 (231)
                      +++++|.|| |++|-.++..|.+   +|.+|+++.|..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            478999998 9999999865554   456799998865

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.39  E-value=0.033  Score=43.13  Aligned_cols=33  Identities=27%  Similarity=0.367  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .+|+|.|| |-.|..++..|.+.|++|.++.|++
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            57999998 9999999999999999999998864

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.38  E-value=0.039  Score=40.43  Aligned_cols=33  Identities=15%  Similarity=0.209  Sum_probs=27.9

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~   38 (231)
                      |||+|.|| |++|-.++..|.+.+  .+|+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            78999998 999999999998864  4677787764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.35  E-value=0.035  Score=40.30  Aligned_cols=34  Identities=15%  Similarity=0.130  Sum_probs=29.1

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++++|+|.|+ |+.+++++.+|.+.| .|+++.|+.
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~   50 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTV   50 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhh
Confidence            3679999997 889999999997776 888888874

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.20  E-value=0.063  Score=37.79  Aligned_cols=35  Identities=9%  Similarity=0.062  Sum_probs=28.7

Q ss_pred             CCeEEEE-cCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVI-GAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVt-GatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .+.++|. .+.|++|..++..|.++|++|+++.|..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            3456665 2349999999999999999999999875

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=93.18  E-value=0.13  Score=34.26  Aligned_cols=34  Identities=21%  Similarity=0.206  Sum_probs=27.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh---CCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE---YGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~---~g~~v~~~~R~~   38 (231)
                      +++++|.|| |++|-.++..|.+   .|.+|+++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478999998 9999999875543   488999999865

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.16  E-value=0.064  Score=38.33  Aligned_cols=35  Identities=17%  Similarity=0.177  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      ..+|+|.||+|.+|...+..+...|. .|++..++.
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~   63 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE   63 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccch
Confidence            46899999999999999998888885 666776653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.05  E-value=0.05  Score=42.05  Aligned_cols=34  Identities=24%  Similarity=0.365  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ..||+|+|| |.-|...+..|.++|++|+++-++.
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            468999998 9999999999999999999986643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.95  E-value=0.064  Score=40.40  Aligned_cols=34  Identities=29%  Similarity=0.348  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .++|+|+|| |..|...+..|.++|++|+++.+..
T Consensus        49 ~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          49 KDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            579999998 9999999999999999999998765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.91  E-value=0.063  Score=39.46  Aligned_cols=37  Identities=14%  Similarity=0.205  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |++.=-|+|+|| |..|...+..|.++|++|.++-++.
T Consensus         2 m~~~yDviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           2 IDTDYDVIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             CCCBCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCCcCCEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            553334799997 9999999999999999999998875

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.79  E-value=0.038  Score=39.93  Aligned_cols=33  Identities=24%  Similarity=0.330  Sum_probs=27.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +.+|+|.|| |++|-.++..|.+.|.++.++.+.
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~   35 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVVG   35 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEEe
Confidence            467999997 999999999999999876665543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.78  E-value=0.05  Score=42.78  Aligned_cols=34  Identities=9%  Similarity=0.243  Sum_probs=30.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..|+|+|| |.-|..++..|.+.|++|.++-++..
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            37999998 99999999999999999999988653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.73  E-value=0.05  Score=38.19  Aligned_cols=71  Identities=13%  Similarity=-0.018  Sum_probs=43.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhhh--hhh----hcCCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFSL--LRV----FHSGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~~--~~~----~~~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      |||.|+|+ |.+|+.++..|..+|.  ++.+++++... .+...  +.+    +.....+...  .|.    +.++++|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~-~~g~alDl~~~~~~~~~~~~i~~~--~d~----~~~~~adi   72 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDL-AVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHH-HHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccch-hhHHHHHHhhhccccCCCCccccC--CCH----HHhccccE
Confidence            68999997 9999999999888873  57777765421 11111  111    1122233322  122    37789999


Q ss_pred             EEEcccC
Q 043777           77 RFIPSEY   83 (231)
Q Consensus        77 ~f~ps~~   83 (231)
                      +++....
T Consensus        73 Vvitag~   79 (142)
T d1ojua1          73 IVVTAGL   79 (142)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            8876543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.73  E-value=0.092  Score=38.74  Aligned_cols=62  Identities=19%  Similarity=0.265  Sum_probs=44.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      ++++.|.|. |.||+.+++.|..-|.+|.+.++......    ...  .+       +....++.++++.+|++.+
T Consensus        49 gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~--~~-------~~~~~~l~~ll~~sD~i~~  110 (193)
T d1mx3a1          49 GETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGV----ERA--LG-------LQRVSTLQDLLFHSDCVTL  110 (193)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTH----HHH--HT-------CEECSSHHHHHHHCSEEEE
T ss_pred             CceEEEecc-ccccccceeeeeccccceeeccCcccccc----hhh--hc-------cccccchhhccccCCEEEE
Confidence            578999997 99999999999999999998887643211    001  11       1123467888999998765

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.51  E-value=0.15  Score=36.37  Aligned_cols=66  Identities=17%  Similarity=0.156  Sum_probs=48.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      |...|+++|.|= |.+|+-++++|...|..|++.-+++-     ..++..-.+.++.        .+.++++..|+.+..
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi-----~alqA~mdGf~v~--------~~~~a~~~aDi~vTa   85 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI-----CAIQAVMEGFNVV--------TLDEIVDKGDFFITC   85 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH-----HHHHHHTTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch-----hhHHHHhcCCccC--------chhHccccCcEEEEc
Confidence            445789999997 99999999999999999998877641     1122222555543        256888888887654

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.51  E-value=0.083  Score=40.06  Aligned_cols=35  Identities=23%  Similarity=0.183  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~   39 (231)
                      +++|+|+|| |..|..++..|.++|. +|.++-|...
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            368999998 9999999999999994 8888888653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=92.24  E-value=0.11  Score=36.71  Aligned_cols=73  Identities=12%  Similarity=0.052  Sum_probs=43.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEEcCCCCch-hhhhhh---hhc-CCcEEEEEcCCCHHHHHHHHccCCE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALIRDSASNF-NFSLLR---VFH-SGVFDYWGLLEDEKSLLEAVKQVDV   76 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~R~~~~~~-~~~~~~---~~~-~~v~~~~~D~~d~~~l~~al~~~d~   76 (231)
                      +++||.|+|+ |.+|+.++..|..++ .++.+++++..... .+..+.   .+. ....+...+  +.    +.++++|+
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~adv   74 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADV   74 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcE
Confidence            4679999996 999999998777777 46777777553210 111111   111 233333322  22    45688998


Q ss_pred             EEEccc
Q 043777           77 RFIPSE   82 (231)
Q Consensus        77 ~f~ps~   82 (231)
                      +.+...
T Consensus        75 vvitag   80 (150)
T d1t2da1          75 VIVTAG   80 (150)
T ss_dssp             EEECCS
T ss_pred             EEEecc
Confidence            887544

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=92.21  E-value=0.076  Score=40.76  Aligned_cols=31  Identities=23%  Similarity=0.296  Sum_probs=28.7

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|| |..|..++..|.++|++|+++.|..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            889998 9999999999999999999998853

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.19  E-value=0.066  Score=39.29  Aligned_cols=32  Identities=13%  Similarity=0.104  Sum_probs=26.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |||.|.| .|++|..++. +++.|++|++++-+.
T Consensus         1 MkI~ViG-lG~vGl~~a~-~~a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGV-LLSLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHH-HHTTTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHH-HHHCCCcEEEEECCH
Confidence            6899998 5999999886 446799999887653

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.02  E-value=0.16  Score=37.09  Aligned_cols=35  Identities=26%  Similarity=0.278  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      .-+|+|.|| |-.|..-++.....|..|.+++.+..
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~   63 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAA   63 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHH
Confidence            458999998 99999999999999999999998764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.96  E-value=0.1  Score=37.21  Aligned_cols=73  Identities=23%  Similarity=0.204  Sum_probs=40.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHH-HHHHhCC-CCEEEE-EcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHH--ccCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFT-RRSIEYG-HPKFAL-IRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAV--KQVD   75 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~-~~L~~~g-~~v~~~-~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al--~~~d   75 (231)
                      |+++.++.|.| +|.+|+.+. +.|.+.. .++.++ +|+... ...+..+.  .++.+.   ....+.+.+..  .++|
T Consensus         1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~-~~~~~a~~--~~i~~~---~~~~d~l~~~~~~~~iD   73 (157)
T d1nvmb1           1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS-DGLARAQR--MGVTTT---YAGVEGLIKLPEFADID   73 (157)
T ss_dssp             CCSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTC-HHHHHHHH--TTCCEE---SSHHHHHHHSGGGGGEE
T ss_pred             CCCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhc-cchhhhhh--cCCccc---ccceeeeeecccccccC
Confidence            88888999999 799998654 5444333 456655 444321 11111111  344432   22345554433  4688


Q ss_pred             EEEEc
Q 043777           76 VRFIP   80 (231)
Q Consensus        76 ~~f~p   80 (231)
                      ++|..
T Consensus        74 iVf~A   78 (157)
T d1nvmb1          74 FVFDA   78 (157)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            88874

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.95  E-value=0.14  Score=37.48  Aligned_cols=63  Identities=19%  Similarity=0.129  Sum_probs=44.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .+++.|.|. |.||+.+++.|..-|.+|...+|......   ....  .+       +....++.++++.+|++.+
T Consensus        44 ~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~---~~~~--~~-------~~~~~~l~~~l~~sD~v~~  106 (188)
T d2naca1          44 AMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPES---VEKE--LN-------LTWHATREDMYPVCDVVTL  106 (188)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHH---HHHH--HT-------CEECSSHHHHGGGCSEEEE
T ss_pred             ccceeeccc-cccchhhhhhhhccCceEEEEeecccccc---cccc--cc-------ccccCCHHHHHHhccchhh
Confidence            578999886 99999999999999999999988653211   0011  11       1223557788999999776

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.88  E-value=0.045  Score=39.36  Aligned_cols=36  Identities=28%  Similarity=0.403  Sum_probs=27.8

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhC-CCCEE-EEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEY-GHPKF-ALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~-g~~v~-~~~R~~   38 (231)
                      +.+||+|.||+|.+|+.|++.+.+. +.++. ++.|..
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~   40 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG   40 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEeccc
Confidence            3579999999999999999998886 45554 444543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.80  E-value=0.086  Score=40.95  Aligned_cols=32  Identities=22%  Similarity=0.409  Sum_probs=28.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      +|+|+|| |-+|..++.+|.++|. +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999998 9999999999999995 799998863

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=91.79  E-value=0.1  Score=37.59  Aligned_cols=34  Identities=24%  Similarity=0.230  Sum_probs=27.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      ..+|+|.|+ |.+|...+..+...|. .|++.+++.
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~   62 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRP   62 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCH
T ss_pred             CCEEEEEcC-Ccchhhhhhhhhcccccccccccchh
Confidence            468999986 9999999998888896 677777653

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.55  E-value=0.1  Score=38.55  Aligned_cols=32  Identities=31%  Similarity=0.397  Sum_probs=28.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      +|+|+|| |..|...+..|.++|+ +|+++-++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            6999998 9999999999999995 799998764

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.52  E-value=0.12  Score=36.90  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~   38 (231)
                      ..||.|+|+ |.+|+.++..|..+|.  ++.+++++.
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~   54 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADT   54 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence            458999996 9999999999999884  577777653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.66  Score=32.69  Aligned_cols=71  Identities=20%  Similarity=0.122  Sum_probs=44.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcE-EEEEcCCCHHHHHHHHc-----cCCE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVF-DYWGLLEDEKSLLEAVK-----QVDV   76 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~-~~~~D~~d~~~l~~al~-----~~d~   76 (231)
                      ..+|+|.|+ |.+|...+..+...|. .|++..++..   +.+..+++  +.. ++..+-.+.....+.+.     ++|+
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~---rl~~a~~~--Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dv  100 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSAT---RLSKAKEI--GADLVLQISKESPQEIARKVEGQLGCKPEV  100 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH---HHHHHHHT--TCSEEEECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHH---HHHHHHHh--CCcccccccccccccccccccccCCCCceE
Confidence            468999987 9999999999988998 5777777642   22233333  333 23333345555544443     4677


Q ss_pred             EEEc
Q 043777           77 RFIP   80 (231)
Q Consensus        77 ~f~p   80 (231)
                      +|-.
T Consensus       101 vid~  104 (171)
T d1pl8a2         101 TIEC  104 (171)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            7644

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.25  E-value=0.1  Score=36.76  Aligned_cols=31  Identities=13%  Similarity=0.326  Sum_probs=26.6

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ||+|.|| |++|-.++..|. ++.+|+++.|..
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999998 999999999885 577999988754

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=91.07  E-value=0.1  Score=36.72  Aligned_cols=70  Identities=14%  Similarity=0.099  Sum_probs=42.3

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCC--CCEEEEEcCCCC-chh-hhhhhhhc---CCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYG--HPKFALIRDSAS-NFN-FSLLRVFH---SGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g--~~v~~~~R~~~~-~~~-~~~~~~~~---~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      +||.|+|+ |.+|+.++-.|+.+|  .++.+++++... ... .++.....   ....+...|   .    +.++++|++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~----~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---H----HHhccccEE
Confidence            68999996 999999999999887  357776665321 001 11111111   223333333   3    356899998


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      .+...
T Consensus        74 VitaG   78 (146)
T d1hyha1          74 ISTLG   78 (146)
T ss_dssp             EECCS
T ss_pred             EEecc
Confidence            87543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=91.06  E-value=0.14  Score=35.83  Aligned_cols=70  Identities=19%  Similarity=0.146  Sum_probs=43.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCCCCchhhh--hhhh---hcCCcEEEEEcCCCHHHHHHHHccCCEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDSASNFNFS--LLRV---FHSGVFDYWGLLEDEKSLLEAVKQVDVR   77 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~~~~~~~~--~~~~---~~~~v~~~~~D~~d~~~l~~al~~~d~~   77 (231)
                      .||.|+|+ |.+|++++..|..+|.  ++.+++++... .+.+  .+.+   +.....+...+  +.    +.++++|++
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~-~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvV   73 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKER-VEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMV   73 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHH-HHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecccc-chhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEE
Confidence            58999997 9999999999998884  57777765421 1111  1111   22333333322  22    357889998


Q ss_pred             EEccc
Q 043777           78 FIPSE   82 (231)
Q Consensus        78 f~ps~   82 (231)
                      .+...
T Consensus        74 VitaG   78 (143)
T d1llda1          74 VITAG   78 (143)
T ss_dssp             EECCC
T ss_pred             EEecc
Confidence            87654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.00  E-value=0.14  Score=36.14  Aligned_cols=34  Identities=18%  Similarity=0.136  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +.+|+|.|+ |.+|...+..+...|++|++.+++.
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~   61 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD   61 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCH
Confidence            568999875 9999999988888999988887754

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=90.97  E-value=0.12  Score=36.00  Aligned_cols=33  Identities=18%  Similarity=0.101  Sum_probs=27.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      +||.|+|+ |.+|+.++-.|..++. ++..++.+.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~   35 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVE   35 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeecc
Confidence            68999996 9999999988888774 677777654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=90.69  E-value=0.16  Score=36.20  Aligned_cols=34  Identities=12%  Similarity=0.141  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC--CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH--PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~--~v~~~~R~~   38 (231)
                      ++||.|+|+ |.+|+.++-.|..+|.  ++.+++++.
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~   55 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLE   55 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence            569999997 9999999999999985  577777653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.52  E-value=0.2  Score=35.25  Aligned_cols=34  Identities=24%  Similarity=0.555  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~~   38 (231)
                      +++|+|+|| |.+|...+..+++.|.. |+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            468999998 99999999999999865 77777764

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.27  E-value=0.17  Score=39.74  Aligned_cols=34  Identities=29%  Similarity=0.336  Sum_probs=30.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..|+|+|| |..|...+..|.++|.+|+++.+...
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            36999998 99999999999999999999988653

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=90.14  E-value=0.25  Score=35.80  Aligned_cols=36  Identities=14%  Similarity=0.218  Sum_probs=29.9

Q ss_pred             CCeEEE-EcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            4 KSNVLV-IGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilV-tGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      ..+++| .||+|.+|...++-....|.+|++.+|...
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~   65 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRP   65 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccc
Confidence            345666 589999999999888888999999998754

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=90.08  E-value=0.14  Score=36.59  Aligned_cols=34  Identities=15%  Similarity=0.285  Sum_probs=26.7

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhC-CCCEEEEEc
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEY-GHPKFALIR   36 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~-g~~v~~~~R   36 (231)
                      |+ ++||.|.|. |.+|+.+++.|.+. +.+++++..
T Consensus         1 M~-kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~   35 (170)
T d1f06a1           1 MT-NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFS   35 (170)
T ss_dssp             CC-CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             CC-cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEe
Confidence            77 689999996 99999999999875 466665443

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.07  E-value=0.18  Score=39.24  Aligned_cols=31  Identities=23%  Similarity=0.274  Sum_probs=28.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|| |..|...+..|.++|++|+++-++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789998 9999999999999999999998754

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.04  E-value=0.15  Score=35.07  Aligned_cols=34  Identities=18%  Similarity=0.311  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH----hCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSI----EYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~----~~g~~v~~~~R~~   38 (231)
                      .++++|.|| |++|-.++..|.    +.|.+|+++.+..
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            468999998 999999988885    4588999888764

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.01  E-value=0.12  Score=39.28  Aligned_cols=38  Identities=21%  Similarity=0.308  Sum_probs=33.4

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      |++...|+|+|| |-.|...+-.|.++|++|.++.+...
T Consensus         1 M~~~~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           1 MSQYSENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             CEEECSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCCCcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            665567999998 99999999999999999999998753

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=89.84  E-value=0.44  Score=33.90  Aligned_cols=32  Identities=19%  Similarity=0.245  Sum_probs=26.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR   36 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R   36 (231)
                      ..+|+|.|+ |.+|...+..+...|..+++...
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~   60 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVD   60 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEE
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeec
Confidence            468999997 99999999888888987655543

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.72  E-value=0.26  Score=36.36  Aligned_cols=74  Identities=14%  Similarity=0.096  Sum_probs=43.4

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEE-cCCCCc--hhhhhhhhhc--CCcEEEE-EcCCCHHHHHHHHc--cCCE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALI-RDSASN--FNFSLLRVFH--SGVFDYW-GLLEDEKSLLEAVK--QVDV   76 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~-R~~~~~--~~~~~~~~~~--~~v~~~~-~D~~d~~~l~~al~--~~d~   76 (231)
                      |||+|.|. +..|..++++|+++|++|..+. ++....  .....+..+.  .++.++. .++.+++.+ +.++  ++|.
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~-~~i~~~~~Dl   78 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWV-ERIAQLSPDV   78 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHH-HHHHHTCCSE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhh-hhhhhhcccc
Confidence            68999975 6689999999999999987654 322110  0001111221  4566654 456665544 4444  4787


Q ss_pred             EEEc
Q 043777           77 RFIP   80 (231)
Q Consensus        77 ~f~p   80 (231)
                      .+..
T Consensus        79 ii~~   82 (203)
T d2blna2          79 IFSF   82 (203)
T ss_dssp             EEEE
T ss_pred             eeee
Confidence            6653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=89.08  E-value=0.16  Score=38.56  Aligned_cols=33  Identities=27%  Similarity=0.300  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~   37 (231)
                      +.+|+|.|+ |.+|++++..|...|. ++++++.+
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            468999997 8899999999999996 56666544

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=88.89  E-value=0.77  Score=32.44  Aligned_cols=34  Identities=18%  Similarity=0.199  Sum_probs=27.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      ..+|+|.|+ |.+|...+..+...|. .|++.+++.
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~   63 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK   63 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH
Confidence            568999999 7799999999999885 667776654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=88.70  E-value=0.26  Score=36.39  Aligned_cols=34  Identities=26%  Similarity=0.298  Sum_probs=29.2

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      ..++|+|-|- |.+|+++++.|.+.|..|++.+.+
T Consensus        26 ~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d   59 (201)
T d1c1da1          26 DGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTD   59 (201)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecch
Confidence            3578999985 999999999999999998876654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.68  E-value=0.26  Score=35.21  Aligned_cols=65  Identities=15%  Similarity=0.145  Sum_probs=45.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      ...|+++|+| .|.+|+.+++.|...|..|.+..+++.     ..++..-.+..+.        .+.+++..+|+++..
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~-----~al~A~~dG~~v~--------~~~~a~~~adivvta   86 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPI-----NALQAAMEGYEVT--------TMDEACQEGNIFVTT   86 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH-----HHHHHHHTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred             ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccc-----hhHHhhcCceEee--------ehhhhhhhccEEEec
Confidence            3478899998 599999999999999999999887642     1122222444443        366788888876543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.45  E-value=0.28  Score=33.95  Aligned_cols=32  Identities=16%  Similarity=0.197  Sum_probs=28.2

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHhCCCCEEEEE
Q 043777            4 KSNVLVIGAI---GRIGYHFTRRSIEYGHPKFALI   35 (231)
Q Consensus         4 ~~~ilVtGat---G~iG~~i~~~L~~~g~~v~~~~   35 (231)
                      .++|+|.||+   +..|..+++.|++.||+|+.+.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVn   53 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN   53 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEEC
Confidence            4789999998   7899999999999999877654

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=88.45  E-value=0.22  Score=40.14  Aligned_cols=33  Identities=18%  Similarity=0.386  Sum_probs=25.8

Q ss_pred             CeEEEEcC------CChhH---HHHHHHHHhCCCCEEEEEcC
Q 043777            5 SNVLVIGA------IGRIG---YHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGa------tG~iG---~~i~~~L~~~g~~v~~~~R~   37 (231)
                      ||||+++.      +|++|   ..++++|.++||+|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            68888774      46666   55689999999999998743

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.23  E-value=0.3  Score=32.69  Aligned_cols=31  Identities=13%  Similarity=0.288  Sum_probs=27.3

Q ss_pred             CeEEEEcCC---ChhHHHHHHHHHhCCCCEEEEE
Q 043777            5 SNVLVIGAI---GRIGYHFTRRSIEYGHPKFALI   35 (231)
Q Consensus         5 ~~ilVtGat---G~iG~~i~~~L~~~g~~v~~~~   35 (231)
                      |+|+|.|+|   +..|..+++.|++.||+|+.+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn   35 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   35 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence            689999998   6799999999999999877653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.21  E-value=0.3  Score=35.95  Aligned_cols=59  Identities=27%  Similarity=0.235  Sum_probs=43.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +++|.|.|. |.||+.+++.|..-|.+|.+.++.....        ....+        +..++.++++.+|++.+
T Consensus        45 ~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~--------~~~~~--------~~~~l~~l~~~~D~v~~  103 (199)
T d1dxya1          45 QQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKG--------DHPDF--------DYVSLEDLFKQSDVIDL  103 (199)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSS--------CCTTC--------EECCHHHHHHHCSEEEE
T ss_pred             ceeeeeeec-ccccccccccccccceeeeccCCccchh--------hhcch--------hHHHHHHHHHhccccee
Confidence            478999997 9999999999999999999888754311        00111        12347788889998765

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.83  E-value=0.21  Score=41.34  Aligned_cols=33  Identities=30%  Similarity=0.425  Sum_probs=28.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~   37 (231)
                      +.||||.|+ |++|..+++.|...|. .+++++.+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            358999998 7799999999999996 78877765

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.83  E-value=0.32  Score=31.76  Aligned_cols=34  Identities=15%  Similarity=0.110  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      +|+|+|.|+ |.-|..++..|.+.+..++...|+.
T Consensus        32 gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          32 GESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             TCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence            589999997 9999999999998877776666654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=87.16  E-value=0.36  Score=35.49  Aligned_cols=60  Identities=25%  Similarity=0.135  Sum_probs=43.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +++|.|.|- |.||+.+++.|..-|.+|.+.++...  + .   ... .+        ....++.++++.+|++.+
T Consensus        43 gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~--~-~---~~~-~~--------~~~~~l~~~l~~sDii~~  102 (197)
T d1j4aa1          43 DQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN--P-E---LEK-KG--------YYVDSLDDLYKQADVISL  102 (197)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC--H-H---HHH-TT--------CBCSCHHHHHHHCSEEEE
T ss_pred             CCeEEEecc-cccchhHHHhHhhhcccccccCcccc--c-c---ccc-ce--------eeeccccccccccccccc
Confidence            578999996 99999999999999999988876542  1 0   010 11        123457888999998765

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=87.14  E-value=1.1  Score=31.93  Aligned_cols=35  Identities=17%  Similarity=0.232  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSA   39 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~   39 (231)
                      ..+|+|+|+ |.+|...+..+...|. +|++++++..
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~   65 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKD   65 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGG
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHH
Confidence            457999986 9999999999999995 6888887653

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=86.56  E-value=0.38  Score=38.15  Aligned_cols=31  Identities=26%  Similarity=0.140  Sum_probs=28.2

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      -|+|+|+ |+-|..++.+|.++|++|.++-|-
T Consensus         4 ~VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            3788996 999999999999999999999884

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.55  E-value=0.39  Score=35.75  Aligned_cols=33  Identities=27%  Similarity=0.362  Sum_probs=29.7

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSA   39 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~   39 (231)
                      -|+|+|| |-.|...+..|.++|++|.++.+...
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4899998 99999999999999999999988653

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=86.40  E-value=0.95  Score=31.78  Aligned_cols=32  Identities=19%  Similarity=0.212  Sum_probs=25.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR   36 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R   36 (231)
                      ..+|+|.|+ |.+|...+..+...|..+++.+.
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~   60 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVD   60 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEc
Confidence            568999998 67999999988889976555443

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.25  E-value=0.89  Score=33.61  Aligned_cols=77  Identities=19%  Similarity=0.211  Sum_probs=50.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEc-------------------CCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGL-------------------LED   63 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D-------------------~~d   63 (231)
                      +.||.|+|- |+-|..++..|.+.|. .|..+.-+..    .+.+........+..+.                   ..+
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD----~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~   89 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTD----AQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKES   89 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESB----HHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHT
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCC----HHHHhcCCcchhcccccccccccccccchHHHHHHHHHH
Confidence            468999997 8899999999999885 3655554432    12222222222222221                   123


Q ss_pred             HHHHHHHHccCCEEEEcccCCC
Q 043777           64 EKSLLEAVKQVDVRFIPSEYGA   85 (231)
Q Consensus        64 ~~~l~~al~~~d~~f~ps~~g~   85 (231)
                      .+.+.++++++|.+|+-+.+|.
T Consensus        90 ~~~I~~~l~~~d~vfi~AGlGG  111 (209)
T d2vapa1          90 AEEIKAAIQDSDMVFITCGLGG  111 (209)
T ss_dssp             HHHHHHHHTTCSEEEEEEETTS
T ss_pred             HHHHHHhccCCCEEEEEEeCCC
Confidence            4578889999999999988876

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.22  E-value=0.88  Score=28.74  Aligned_cols=67  Identities=10%  Similarity=0.135  Sum_probs=43.1

Q ss_pred             CCeEEEEcCCChhHH-HHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEEcc
Q 043777            4 KSNVLVIGAIGRIGY-HFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFIPS   81 (231)
Q Consensus         4 ~~~ilVtGatG~iG~-~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~ps   81 (231)
                      .|||-++|- |++|. .|++.|+++|+.|...++..+  +   ..+.+. .|+++..+  .+.+.    ++++|.+...+
T Consensus         1 ~~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~--~---~t~~L~~~Gi~i~~g--h~~~~----i~~~d~vV~Ss   68 (89)
T d1j6ua1           1 HMKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET--E---RTAYLRKLGIPIFVP--HSADN----WYDPDLVIKTP   68 (89)
T ss_dssp             CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC--H---HHHHHHHTTCCEESS--CCTTS----CCCCSEEEECT
T ss_pred             CcEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC--h---hHHHHHHCCCeEEee--ecccc----cCCCCEEEEec
Confidence            478999987 45665 778889999999999988753  2   112333 67776543  12222    25677766554


Q ss_pred             c
Q 043777           82 E   82 (231)
Q Consensus        82 ~   82 (231)
                      .
T Consensus        69 A   69 (89)
T d1j6ua1          69 A   69 (89)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=85.56  E-value=1.2  Score=32.42  Aligned_cols=76  Identities=25%  Similarity=0.351  Sum_probs=49.5

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEc-------------------CCCH
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGL-------------------LEDE   64 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D-------------------~~d~   64 (231)
                      +||.|.|- |+-|..++..|.+.+. .|..+.-+.+    .+.+.......++.-+.                   ..+.
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD----~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~   75 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTD----LQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESE   75 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESC----HHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCC----HHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHH
Confidence            47889997 8899999999999874 3555444432    22222222222332221                   1235


Q ss_pred             HHHHHHHccCCEEEEcccCCC
Q 043777           65 KSLLEAVKQVDVRFIPSEYGA   85 (231)
Q Consensus        65 ~~l~~al~~~d~~f~ps~~g~   85 (231)
                      +.+.+.++++|.+|+.+.+|.
T Consensus        76 ~~I~~~l~~~d~vfi~AGlGG   96 (194)
T d1w5fa1          76 EKIREVLQDTHMVFITAGFGG   96 (194)
T ss_dssp             HHHHHHTTTCSEEEEEEETTS
T ss_pred             HHHHHHhcCCCeEEEEEecCC
Confidence            578889999999999988886

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.25  E-value=1.8  Score=30.95  Aligned_cols=63  Identities=21%  Similarity=0.204  Sum_probs=47.3

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +++|.|+|= |-.|++-+..|...|.+|++-.|+.+.+. .   ..-..|.++        .++.++.+.+|++.+
T Consensus        16 ~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~-~---~A~~~Gf~v--------~~~~eA~~~aDiim~   78 (182)
T d1np3a2          16 GKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATV-A---KAEAHGLKV--------ADVKTAVAAADVVMI   78 (182)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHH-H---HHHHTTCEE--------ECHHHHHHTCSEEEE
T ss_pred             CCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccH-H---HHhhhcccc--------ccHHHHhhhcCeeee
Confidence            578999997 99999999999999999999888865321 1   111155554        346788899998664

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.07  E-value=0.4  Score=35.40  Aligned_cols=34  Identities=12%  Similarity=0.203  Sum_probs=29.2

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhC--CCCEEEEEcCCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEY--GHPKFALIRDSA   39 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~--g~~v~~~~R~~~   39 (231)
                      .||+|+|| |-.|...+..|.++  |++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            58999998 99999999999875  789999988653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=85.05  E-value=0.55  Score=35.60  Aligned_cols=32  Identities=19%  Similarity=0.216  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR   36 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R   36 (231)
                      .++|+|-|- |.+|+++++.|.+.|..|+.++-
T Consensus        31 g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          31 GKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence            578999885 99999999999999999887663

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=84.89  E-value=0.48  Score=36.91  Aligned_cols=32  Identities=25%  Similarity=0.253  Sum_probs=28.0

Q ss_pred             EEEEcCCChhHHHHHHHHH-----hCCCCEEEEEcCCC
Q 043777            7 VLVIGAIGRIGYHFTRRSI-----EYGHPKFALIRDSA   39 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~-----~~g~~v~~~~R~~~   39 (231)
                      |+|.|| |-.|..++..|.     ++|++|+++-|++.
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            899998 999999999885     57999999998754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=84.65  E-value=0.6  Score=33.29  Aligned_cols=34  Identities=24%  Similarity=0.193  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      +++|+|.|.+.-+|+.++.-|.++|..|+++...
T Consensus        37 GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~   70 (166)
T d1b0aa1          37 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF   70 (166)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred             cceEEEEeccccccHHHHHHHHHhhccccccccc
Confidence            6899999999999999999999999998776443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.59  E-value=0.63  Score=33.31  Aligned_cols=36  Identities=8%  Similarity=0.041  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      .+++|+|.|.+.-+|+.++.-|.++|..|+.+....
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            368999999999999999999999999998876543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=84.35  E-value=0.67  Score=33.72  Aligned_cols=72  Identities=19%  Similarity=0.151  Sum_probs=42.3

Q ss_pred             CCCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCH---HHHHHHHcc--CCE
Q 043777            3 GKSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDE---KSLLEAVKQ--VDV   76 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~---~~l~~al~~--~d~   76 (231)
                      +..+|+|.|+ |.+|...+..+...|. .|++.+++.+   +.+..+.  .+...+ .|..+.   +.+.+...+  +|+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~---rl~~a~~--~Ga~~~-~~~~~~~~~~~i~~~t~g~g~D~   97 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPA---RLAHAKA--QGFEIA-DLSLDTPLHEQIAALLGEPEVDC   97 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHH---HHHHHHH--TTCEEE-ETTSSSCHHHHHHHHHSSSCEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccch---hhHhhhh--ccccEE-EeCCCcCHHHHHHHHhCCCCcEE
Confidence            4578999986 9999888887777786 4666665432   2222233  344443 244333   334444443  677


Q ss_pred             EEEcc
Q 043777           77 RFIPS   81 (231)
Q Consensus        77 ~f~ps   81 (231)
                      .|-..
T Consensus        98 vid~v  102 (195)
T d1kola2          98 AVDAV  102 (195)
T ss_dssp             EEECC
T ss_pred             EEECc
Confidence            77543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=84.08  E-value=2.1  Score=30.21  Aligned_cols=76  Identities=12%  Similarity=0.076  Sum_probs=42.8

Q ss_pred             CCCeEEEEcCCChhHHH--HHHHHHhC----CCCEEEEEcCCCC-chhh----hhhhhhcCCcEEEEEcCCCHHHHHHHH
Q 043777            3 GKSNVLVIGAIGRIGYH--FTRRSIEY----GHPKFALIRDSAS-NFNF----SLLRVFHSGVFDYWGLLEDEKSLLEAV   71 (231)
Q Consensus         3 ~~~~ilVtGatG~iG~~--i~~~L~~~----g~~v~~~~R~~~~-~~~~----~~~~~~~~~v~~~~~D~~d~~~l~~al   71 (231)
                      ++|||.|.|| |.+|..  ++..|+..    +.++..++++... ....    +....+....++...     .+..+++
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~-----td~~eaL   74 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT-----MNLDDVI   74 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHHH
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe-----CChhhcc
Confidence            3689999997 888864  34445543    3478888876422 0000    111112223333222     2356789


Q ss_pred             ccCCEEEEcccCC
Q 043777           72 KQVDVRFIPSEYG   84 (231)
Q Consensus        72 ~~~d~~f~ps~~g   84 (231)
                      +++|+++.....|
T Consensus        75 ~dad~Vv~~~~~g   87 (171)
T d1obba1          75 IDADFVINTAMVG   87 (171)
T ss_dssp             TTCSEEEECCCTT
T ss_pred             cCCCeEeeecccc
Confidence            9999988765444

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.82  E-value=1.3  Score=32.40  Aligned_cols=30  Identities=20%  Similarity=0.268  Sum_probs=26.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCCEEEEE
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHPKFALI   35 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~   35 (231)
                      |||++.|. +..|..+++.|+++|++|.++.
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~   30 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVF   30 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEE
Confidence            68999985 7889999999999999988654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.78  E-value=0.47  Score=36.79  Aligned_cols=33  Identities=15%  Similarity=0.245  Sum_probs=22.9

Q ss_pred             CeEEEEcC-C-Chh--HHHHHHHHHhCCCCEEEEEcC
Q 043777            5 SNVLVIGA-I-GRI--GYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGa-t-G~i--G~~i~~~L~~~g~~v~~~~R~   37 (231)
                      |||+|++| | |.+  +..|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57777764 3 222  234789999999999887753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.35  E-value=0.63  Score=35.81  Aligned_cols=31  Identities=19%  Similarity=0.452  Sum_probs=28.6

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      |+|+|| |..|...+..|.++|.+|.++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899998 9999999999999999999998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=83.30  E-value=0.78  Score=33.34  Aligned_cols=64  Identities=14%  Similarity=0.041  Sum_probs=44.5

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFIP   80 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~p   80 (231)
                      .+++.|.|. |.||+.+++.|..-|.+|...++...... ..  ..  ..       ....+++.++++.+|++.+.
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~--~~--~~-------~~~~~~l~~ll~~sD~v~l~  110 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSS-DE--AS--YQ-------ATFHDSLDSLLSVSQFFSLN  110 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHH-HH--HH--HT-------CEECSSHHHHHHHCSEEEEC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhccccccccccccccc-hh--hc--cc-------ccccCCHHHHHhhCCeEEec
Confidence            578999997 99999999999999999988877543211 00  00  00       11224578899999997763

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.00  E-value=0.67  Score=31.45  Aligned_cols=33  Identities=24%  Similarity=0.414  Sum_probs=26.8

Q ss_pred             CCeEEEEcCC---ChhHHHHHHHHHhCC-CCEEEEEc
Q 043777            4 KSNVLVIGAI---GRIGYHFTRRSIEYG-HPKFALIR   36 (231)
Q Consensus         4 ~~~ilVtGat---G~iG~~i~~~L~~~g-~~v~~~~R   36 (231)
                      .++|+|.|||   +..|..+++.|.+.| ++|+.+..
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP   44 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNI   44 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECS
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEecc
Confidence            5899999999   899999999988766 56665543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=82.90  E-value=0.84  Score=32.95  Aligned_cols=59  Identities=15%  Similarity=0.168  Sum_probs=42.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .+++.|.|. |.||+.+++.|..-|.+|...++.....        . ...  .     ..+++.++++.+|++.+
T Consensus        44 ~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~--------~-~~~--~-----~~~~l~ell~~sDii~i  102 (188)
T d1sc6a1          44 GKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLP--------L-GNA--T-----QVQHLSDLLNMSDVVSL  102 (188)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCC--------C-TTC--E-----ECSCHHHHHHHCSEEEE
T ss_pred             ceEEEEeec-ccchhhhhhhcccccceEeeccccccch--------h-hhh--h-----hhhhHHHHHhhccceee
Confidence            578999986 9999999999999999999888754211        0 111  1     11357788899998766

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.86  E-value=0.84  Score=33.09  Aligned_cols=31  Identities=23%  Similarity=0.310  Sum_probs=28.3

Q ss_pred             EEEEcCCChhHHHHHHHHHhCCCCEEEEEcCC
Q 043777            7 VLVIGAIGRIGYHFTRRSIEYGHPKFALIRDS   38 (231)
Q Consensus         7 ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~   38 (231)
                      ++|+|| |..|...+..+.+.|.+|.++-+..
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789998 9999999999999999999998753

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.85  E-value=0.81  Score=35.68  Aligned_cols=32  Identities=25%  Similarity=0.332  Sum_probs=28.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR   36 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R   36 (231)
                      .++|+|-|- |.+|+++++.|.+.|..|+.++-
T Consensus        36 gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          36 DKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            468999886 99999999999999999887654

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.39  E-value=0.65  Score=33.23  Aligned_cols=32  Identities=22%  Similarity=0.203  Sum_probs=25.6

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCC-CCEEEEE
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYG-HPKFALI   35 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g-~~v~~~~   35 (231)
                      |+  +||.|-|- |.||+.+++++.+++ .+++.+.
T Consensus         1 M~--irIaINGf-GRIGR~v~Ral~~~~dieiVaIN   33 (172)
T d2czca2           1 MK--VKVGVNGY-GTIGKRVAYAVTKQDDMELIGIT   33 (172)
T ss_dssp             CC--EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEE
T ss_pred             Cc--EEEEEECC-CHHHHHHHHHHHhCCCceEEEEe
Confidence            55  89999996 999999999998865 4555544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.25  E-value=0.78  Score=32.82  Aligned_cols=74  Identities=12%  Similarity=0.012  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhc-CCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFH-SGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      +++++|.|-+.-+|+.++..|+++|..|+.+..+.....  ....... .....-...--..+.+++....+|++..
T Consensus        29 GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs  103 (171)
T d1edza1          29 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF--TRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT  103 (171)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE--ESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc--ccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence            689999999999999999999999999887654421100  0000001 1111111112356778999999998774

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=82.11  E-value=0.66  Score=36.72  Aligned_cols=31  Identities=29%  Similarity=0.268  Sum_probs=27.8

Q ss_pred             eEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      -++|+|+ |.-|..++.+|.++|++|.++-|-
T Consensus         9 dvIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           9 PALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            3788897 999999999999999999999874

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.09  E-value=0.8  Score=34.03  Aligned_cols=34  Identities=12%  Similarity=0.263  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhC--------------------C-CCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEY--------------------G-HPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~--------------------g-~~v~~~~R~~   38 (231)
                      .++|+|+|+ |.++.-+++.|++.                    | .+|+++.|+.
T Consensus        39 gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg   93 (225)
T d1cjca1          39 CDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG   93 (225)
T ss_dssp             SSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred             CceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence            578999998 99999999999884                    5 4678888765

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.98  E-value=0.87  Score=32.79  Aligned_cols=61  Identities=23%  Similarity=0.204  Sum_probs=42.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcCCCCchhhhhhhhhcCCcEEEEEcCCCHHHHHHHHccCCEEEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRDSASNFNFSLLRVFHSGVFDYWGLLEDEKSLLEAVKQVDVRFI   79 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~~~~~~~~~~~~~~~~~v~~~~~D~~d~~~l~~al~~~d~~f~   79 (231)
                      .+++.|.|. |.||+.+++.+..-|.+|.+.+|....   .. ...  .++.        ..++.++++.+|++.+
T Consensus        44 ~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~---~~-~~~--~~~~--------~~~l~ell~~sDiv~~  104 (184)
T d1ygya1          44 GKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP---AR-AAQ--LGIE--------LLSLDDLLARADFISV  104 (184)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH---HH-HHH--HTCE--------ECCHHHHHHHCSEEEE
T ss_pred             ceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh---hH-Hhh--cCce--------eccHHHHHhhCCEEEE
Confidence            568888886 999999999999889888888765431   10 011  1222        1346788999999775

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=81.80  E-value=1  Score=32.94  Aligned_cols=76  Identities=12%  Similarity=0.129  Sum_probs=45.9

Q ss_pred             CCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEE-cCCCCchh-----hhhhhhh-c-CCcEEEEEcCCCHHHHHHHHcc
Q 043777            2 AGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALI-RDSASNFN-----FSLLRVF-H-SGVFDYWGLLEDEKSLLEAVKQ   73 (231)
Q Consensus         2 ~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~-R~~~~~~~-----~~~~~~~-~-~~v~~~~~D~~d~~~l~~al~~   73 (231)
                      +.+|||+++|. +..+..+++.|++.|+++..+. +......+     ......+ . .++........+.+.+.+.++.
T Consensus         1 ~~~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (206)
T d1fmta2           1 SESLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAE   79 (206)
T ss_dssp             CCCCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHH
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhh
Confidence            35799999985 7899999999999999876554 32111000     0001111 1 5566666665556666666664


Q ss_pred             --CCEEE
Q 043777           74 --VDVRF   78 (231)
Q Consensus        74 --~d~~f   78 (231)
                        +|..+
T Consensus        80 ~~~d~~v   86 (206)
T d1fmta2          80 LQADVMV   86 (206)
T ss_dssp             TTCSEEE
T ss_pred             hcceEEE
Confidence              56644

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=81.80  E-value=0.63  Score=35.59  Aligned_cols=32  Identities=19%  Similarity=0.327  Sum_probs=27.9

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEc
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIR   36 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R   36 (231)
                      .++|+|-|- |.+|+++++.|.+.|..|++++-
T Consensus        36 g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          36 GKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            578999885 99999999999999999887653

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.67  E-value=0.47  Score=34.83  Aligned_cols=34  Identities=9%  Similarity=0.088  Sum_probs=29.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-------CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-------PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-------~v~~~~R~~   38 (231)
                      +.+|+|+|| |--|...+..|.++||       +|+++.+.+
T Consensus         2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            458999998 9999999999999884       689998865

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.60  E-value=0.92  Score=33.42  Aligned_cols=34  Identities=21%  Similarity=0.346  Sum_probs=28.2

Q ss_pred             CCeEEEEcCCChhHHHHHHHHH--------------------hCC-CCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSI--------------------EYG-HPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~--------------------~~g-~~v~~~~R~~   38 (231)
                      .++|+|+|+ |.++.-+++-|+                    +.| .+|+++.|+.
T Consensus        39 gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg   93 (216)
T d1lqta1          39 GARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG   93 (216)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred             CceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence            578999998 999999998877                    456 4688888875

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.38  E-value=0.93  Score=34.45  Aligned_cols=32  Identities=19%  Similarity=0.218  Sum_probs=28.5

Q ss_pred             eEEEEcCCChhHHHHHHHHHh-CCCCEEEEEcCC
Q 043777            6 NVLVIGAIGRIGYHFTRRSIE-YGHPKFALIRDS   38 (231)
Q Consensus         6 ~ilVtGatG~iG~~i~~~L~~-~g~~v~~~~R~~   38 (231)
                      -|+|+|| |.-|...+..|.+ .|++|.++.+.+
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            3899998 9999999999987 599999999875

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.33  E-value=0.91  Score=33.23  Aligned_cols=33  Identities=18%  Similarity=0.251  Sum_probs=27.0

Q ss_pred             CeEEEEcCCChhHHHHHHHHHhCCCC--EEEEEcCC
Q 043777            5 SNVLVIGAIGRIGYHFTRRSIEYGHP--KFALIRDS   38 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i~~~L~~~g~~--v~~~~R~~   38 (231)
                      ..++|.|| |++|-.++..|.+.|+.  |+++.+..
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            35788887 99999999999988765  77777653

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=81.14  E-value=0.32  Score=32.98  Aligned_cols=34  Identities=15%  Similarity=0.157  Sum_probs=26.4

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHh-CCCCEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIE-YGHPKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~-~g~~v~~~~R~~   38 (231)
                      +-+++|.|| |.+|+.+++.+.. .+++++++.-+.
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd   37 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVD   37 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESC
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCc
Confidence            348999998 9999999987754 467887776543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.94  E-value=0.8  Score=33.55  Aligned_cols=33  Identities=15%  Similarity=0.145  Sum_probs=26.9

Q ss_pred             CeEEEEcCCChhHHHH-----HHHHHhCCCCEEEEEcC
Q 043777            5 SNVLVIGAIGRIGYHF-----TRRSIEYGHPKFALIRD   37 (231)
Q Consensus         5 ~~ilVtGatG~iG~~i-----~~~L~~~g~~v~~~~R~   37 (231)
                      +.|+|+|+.|++|+..     +..|.+.|++|.+++-+
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6799999999999854     56677889999998754

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=80.88  E-value=0.72  Score=36.15  Aligned_cols=36  Identities=25%  Similarity=0.385  Sum_probs=30.1

Q ss_pred             CCCCCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            1 MAGKSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         1 M~~~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      |+..=-++|+|+ |.-|..++.+|.++|++|.++-+.
T Consensus         1 md~~yDviIVGs-G~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           1 MDIKYDVVIVGS-GPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             CCSEEEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcccEEEECc-CHHHHHHHHHHhhCCCeEEEEecC
Confidence            443334889997 999999999999999999999764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=80.88  E-value=0.99  Score=33.86  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=28.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~~~~R~   37 (231)
                      .++|+|-|- |.+|+++++.|.+.|..+++.+.+
T Consensus        39 g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~   71 (230)
T d1leha1          39 GLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVN   71 (230)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEeeccc
Confidence            578999886 999999999999999998876543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=80.84  E-value=3.3  Score=28.78  Aligned_cols=33  Identities=18%  Similarity=0.138  Sum_probs=25.1

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCC-EEEEEcC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHP-KFALIRD   37 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~-v~~~~R~   37 (231)
                      ..+|+|.|+ |.+|...+..+...|.. |++.+++
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~   66 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK   66 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccch
Confidence            467899886 99999999888888864 4555554

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.71  E-value=0.41  Score=33.39  Aligned_cols=28  Identities=25%  Similarity=0.394  Sum_probs=24.6

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCCCEE
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGHPKF   32 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~~v~   32 (231)
                      .++++|+|| |++|..++..+.+.|..+.
T Consensus        29 gkrVvVIGg-G~~g~d~a~~~~r~G~~~~   56 (162)
T d1ps9a2          29 GNKVAIIGC-GGIGFDTAMYLSQPGESTS   56 (162)
T ss_dssp             CSEEEEECC-HHHHHHHHHHHTCCSSCGG
T ss_pred             CCceEEEcC-chhHHHHHHHHHHcCCccc
Confidence            578999998 9999999999999997543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=80.01  E-value=0.81  Score=32.50  Aligned_cols=34  Identities=18%  Similarity=0.219  Sum_probs=27.8

Q ss_pred             CCeEEEEcCCChhHHHHHHHHHhCCC-CEEEEEcCC
Q 043777            4 KSNVLVIGAIGRIGYHFTRRSIEYGH-PKFALIRDS   38 (231)
Q Consensus         4 ~~~ilVtGatG~iG~~i~~~L~~~g~-~v~~~~R~~   38 (231)
                      ..+|+|.|+ |.+|...+..+...|. .|++.+++.
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~   62 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK   62 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH
Confidence            468999996 9999999999998996 566776654