Citrus Sinensis ID: 043794

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MALFNLNKDSLTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHccccccccccccHHccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccHHHccccccEEccccccccccccccHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHEEEEEEcccccccccccccccccHcccHHHHHHHHHcccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHcHcccccEEEEccccccccccccccccccccccccccEccccEccHHHHHHHHHHHcccccccccHHHHcHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
malfnlnkdsLTFLLFGIFTLAIPTIVVSQVAnlvtpeffdgiknvadpsspgksfytrDAFLNaansypefgsgstddSKREIAAFFAHVThetghlcyveeidksnaycdtsntqypcvpgkfyygrgpiqltgngnygaagqaigfdglnspetvandpmtnvHSVVNQGFGATIQRINGalecggkqpdkVQARIGYYTDYcnkfgvspgenlsc
Flexible Loop (DISEMBL)
MALFNLNKDSLTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKfgvspgenlsc
Low Complexity Region (SEG)
MALFNLNKDSLTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC
Disordered region (IsUnstruct)
***FNLNKDSLTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVA********FYTRDAFLNA*****************EIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGV********
Disordered Region (DISOPRED)
*******KDSLTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGE*LSC
Disordered Region (DISEMBL)
MALFNLNKDSLTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC
Disordered Region (DISPRO)
*ALFNLNKDSLTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALFNLNKDSLTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	219	2.2.26 [Sep-21-2011]
O04138	285	Chitinase 4 OS=Oryza sati	no	no	0.863	0.663	0.618	3e-65
Q7Y1Z0	288	Chitinase 5 OS=Oryza sati	no	no	0.863	0.656	0.608	4e-63
P29022	280	Endochitinase A OS=Zea ma	N/A	no	0.872	0.682	0.581	3e-62
Q6K8R2	271	Chitinase 6 OS=Oryza sati	no	no	0.899	0.726	0.556	1e-59
P29023	269	Endochitinase B (Fragment	N/A	no	0.872	0.710	0.551	2e-59
P27054	270	Endochitinase PR4 OS=Phas	N/A	no	0.926	0.751	0.566	9e-59
P42820	288	Acidic endochitinase SP2	N/A	no	0.863	0.656	0.572	1e-58
Q06209	268	Basic endochitinase CHB4	N/A	no	0.844	0.690	0.537	1e-53
P80052	250	Acidic endochitinase OS=D	N/A	no	0.858	0.752	0.529	1e-53
Q5NB11	290	Chitinase 10 OS=Oryza sat	no	no	0.785	0.593	0.394	2e-37

>sp|O04138|CHI4_ORYSJ Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2

 Score =  248 bits (632), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 125/202 (61%), Positives = 145/202 (71%), Gaps = 13/202 (6%)

Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGST-DDSKREIAAFFA 89
           V ++VT  FF+GIKN A     GKSFYTR +FLNAA SY  F +  T DDSKREIAAFFA
Sbjct: 84  VESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFA 143

Query: 90  HVTHETGHLCYVEEIDKSNA-YCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIG 148
           HVTHETGH+CY+ EI+ +N  YCD SN Q+PC PGK YYGRGP+Q++ N NYG AG+ IG
Sbjct: 144 HVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIG 203

Query: 149 FDGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQA 197
           FDGL  P+ VA DP           M NVH V++QGFGATI+ INGALEC GK P  V A
Sbjct: 204 FDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNA 263

Query: 198 RIGYYTDYCNKFGVSPGENLSC 219
           R+ YY DYC +FGVSPG NL C
Sbjct: 264 RVNYYKDYCRQFGVSPGGNLYC 285

Hydrolyzes chitin and may function in reproductive organs during embryogenesis and seed maturation.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4

>sp|Q7Y1Z0|CHI5_ORYSJ Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1

 Score =  241 bits (614), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 123/202 (60%), Positives = 142/202 (70%), Gaps = 13/202 (6%)

Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGST-DDSKREIAAFFA 89
           V ++VT  FF+GIKN A     GK+FYTR +FLNAA+SY  F    T DDSKREIAAFFA
Sbjct: 87  VESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFA 146

Query: 90  HVTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIG 148
           HVTHETGH+CY+ EI+  S  YCD +N Q+PC PGK YYGRGP+Q++ N NYG AGQ IG
Sbjct: 147 HVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIG 206

Query: 149 FDGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQA 197
           FDGL  P+ VA DP           M NVH V+ QGFGATI+ INGALEC GK P  V A
Sbjct: 207 FDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNA 266

Query: 198 RIGYYTDYCNKFGVSPGENLSC 219
           R+ YY DYC +FGV PG NL C
Sbjct: 267 RVNYYKDYCRQFGVDPGGNLYC 288

May function in reproductive organs during embryogenesis and seed maturation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P29022|CHIA_MAIZE Endochitinase A OS=Zea mays PE=1 SV=1

 Score =  238 bits (606), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 118/203 (58%), Positives = 141/203 (69%), Gaps = 12/203 (5%)

Query: 29  SQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTD-DSKREIAAF 87
           + VAN+VT  FF+GIKN A     GK+FYTR AFL+A N+YP F  G T+ + KREIAAF
Sbjct: 78  ANVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAF 137

Query: 88  FAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAI 147
           FAHVTHETGH CY+ EI+KSNAYCD SN Q+PC  G+ YYGRGP+Q++ N NYG AG+ I
Sbjct: 138 FAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDI 197

Query: 148 GFDGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQ 196
           GF+GL  P  VA D            M NVH V+ QGFGATI+ INGALEC G  P ++ 
Sbjct: 198 GFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMN 257

Query: 197 ARIGYYTDYCNKFGVSPGENLSC 219
           AR+GYY  YC +  V PG NL C
Sbjct: 258 ARVGYYKQYCQQLRVDPGPNLIC 280

Defense against chitin containing fungal pathogens.

Zea mays (taxid: 4577)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q6K8R2|CHI6_ORYSJ Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1

 Score =  229 bits (583), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 118/212 (55%), Positives = 139/212 (65%), Gaps = 15/212 (7%)

Query: 23  IPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSK 81
           +P      VA++VTPEFF  +   AD     K FYTRDAFL AA  YP FG +GS DDSK
Sbjct: 60  VPATNDVSVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSK 119

Query: 82  REIAAFFAHVTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNY 140
           REIAAFFAH  HET   CY+EEID  S  YCD ++TQ+PC+ GK YYGRGP+Q++ N NY
Sbjct: 120 REIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY 179

Query: 141 GAAGQAIGFDGLNSPETVANDPM-----------TNVHS--VVNQGFGATIQRINGALEC 187
           G AGQ+IGFDGL  P+ VA  P+            NVH   V  QGFGATI+ INGALEC
Sbjct: 180 GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALEC 239

Query: 188 GGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
            GK P  V  R+ YY  +C +FGV PG NL+C
Sbjct: 240 DGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271

May function in reproductive organs during embryogenesis and seed maturation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P29023|CHIB_MAIZE Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1

 Score =  228 bits (582), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 112/203 (55%), Positives = 136/203 (66%), Gaps = 12/203 (5%)

Query: 29  SQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTD-DSKREIAAF 87
           + VA++VT  FF+GIKN A     GK+FYTR AFL+A   YP F  G +    KREIAAF
Sbjct: 67  ANVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAF 126

Query: 88  FAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAI 147
           FAH THETGH CY+ EI+KSNAYCD +  Q+PC  G+ YYGRGP+Q++ N NYG AG+AI
Sbjct: 127 FAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAI 186

Query: 148 GFDGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQ 196
           GFDGL  P  VA D            M +VH VV QGFGAT + +  ALECGG  P ++ 
Sbjct: 187 GFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMN 246

Query: 197 ARIGYYTDYCNKFGVSPGENLSC 219
           AR+GYY  YC + GV PG NL+C
Sbjct: 247 ARVGYYRQYCRQLGVDPGPNLTC 269

Defense against chitin containing fungal pathogens.

Zea mays (taxid: 4577)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27054|CHI4_PHAVU Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1

 Score =  226 bits (576), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 123/217 (56%), Positives = 147/217 (67%), Gaps = 14/217 (6%)

Query: 17  GIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-G 75
           G  T A P    +  A+++T +F +GI + AD    GK+FYTRDAFL+A NSY +FG  G
Sbjct: 54  GPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVG 113

Query: 76  STDDSKREIAAFFAHVTHETGHLCYVEEID-KSNAYCDT-SNTQYPCVPGKFYYGRGPIQ 133
           S DDSKREIAA FAH THETGH CY+EEID  S  YCD  S  QYPC   K Y+GRGPIQ
Sbjct: 114 SEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQ 173

Query: 134 LTGNGNYGAAGQAIGFDGLNSPETVAND-----------PMTNVHSVVNQGFGATIQRIN 182
           L+ N NYG AG A  FDGL +PETV+ND            M +V  V+NQGFGATI+ IN
Sbjct: 174 LSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAIN 233

Query: 183 GALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
           GALEC G  P  VQAR+ YYT+YC + GV+ G+NL+C
Sbjct: 234 GALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270

Defense against chitin containing fungal pathogens.

Phaseolus vulgaris (taxid: 3885)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P42820|CHIP_BETVU Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1

 Score =  225 bits (574), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/206 (57%), Positives = 146/206 (70%), Gaps = 17/206 (8%)

Query: 29  SQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAF 87
           S V+++V+  FFDGI   A  S PGK+FYTR AFL+A +  P+FG+ GS+DD+KREIAAF
Sbjct: 85  SSVSDIVSQAFFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAF 142

Query: 88  FAHVTHETGHLCYVEEIDKS--NAYCDTSNT-QYPCVPGKFYYGRGPIQLTGNGNYGAAG 144
           FAH++HET +LC++EE D    +AYCD     QYPC  GK YYGRGP+QL+ N NY  AG
Sbjct: 143 FAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAG 202

Query: 145 QAIGFDGLNSPETVAND-----------PMTNVHSVVNQGFGATIQRINGALECGGKQPD 193
           QAIGFDGL +PE VA D            MTNVHSV+NQGFGAT + INGALEC G+  D
Sbjct: 203 QAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQD 262

Query: 194 KVQARIGYYTDYCNKFGVSPGENLSC 219
           +   RI +Y  YC  FGV+PG+NL+C
Sbjct: 263 QANDRIQFYKKYCADFGVAPGDNLTC 288

Defense against chitin containing fungal pathogens.

Beta vulgaris (taxid: 161934)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q06209|CHI4_BRANA Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2

 Score =  209 bits (532), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/201 (53%), Positives = 134/201 (66%), Gaps = 16/201 (7%)

Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAH 90
           V ++VT  FF+GI N A     GK+FYTRD+F+NAAN++P F +  T   +REIA  FAH
Sbjct: 72  VGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANSVT---RREIATMFAH 128

Query: 91  VTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGF 149
            THETGH CY+EEI+  S  YCD +N QYPC PGK Y+GRGPIQL+ N NYGA GQ++  
Sbjct: 129 FTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNL 188

Query: 150 DGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQAR 198
           + L  PE V+++P           M +V  V+NQGFGATI+ ING +EC G     V AR
Sbjct: 189 NLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNAR 247

Query: 199 IGYYTDYCNKFGVSPGENLSC 219
           I YY DYC + GV PG NLSC
Sbjct: 248 IRYYRDYCGQLGVDPGPNLSC 268

Defense against chitin containing fungal pathogens.

Brassica napus (taxid: 3708)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P80052|CHIT_DIOJA Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2

 Score =  209 bits (531), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/206 (52%), Positives = 137/206 (66%), Gaps = 18/206 (8%)

Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTD-DSKREIAAFFA 89
           V+++VT EF+DGI + A  + PGKSFYTR  FL A ++YP FG+  TD D KREIAA+FA
Sbjct: 46  VSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFA 105

Query: 90  HVTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIG 148
           HVTHETGHLCY+EE D  +N YC  S  QYPC P K Y+GRGP+QL+ N NY  AG+ + 
Sbjct: 106 HVTHETGHLCYIEERDGHANNYCQESQ-QYPCNPNKEYFGRGPMQLSWNYNYIDAGKELH 164

Query: 149 FDGLNSPETVANDPMTNVHSVV---------------NQGFGATIQRINGALECGGKQPD 193
           FDGLN P+ V  DP+ +  + +               NQGFGATI+ ING  EC G    
Sbjct: 165 FDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTA 224

Query: 194 KVQARIGYYTDYCNKFGVSPGENLSC 219
           ++ AR+GYY +YC + GVSPG NL C
Sbjct: 225 QMMARVGYYQEYCAQLGVSPGNNLPC 250

Defense against chitin containing fungal pathogens.

Dioscorea japonica (taxid: 4673)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5NB11|CHI10_ORYSJ Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1

 Score =  155 bits (391), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 111/218 (50%), Gaps = 46/218 (21%)

Query: 48  DPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVTHET----------- 95
           D + P + FYT  +F+ AA  +P F  +G  D  KRE+AAF A ++HET           
Sbjct: 67  DAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGP 126

Query: 96  --GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLN 153
               LCY EEI+  ++YCD ++ Q+PC PGK Y+GRGPIQ++ N NYG AGQA+GFDGL 
Sbjct: 127 YAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLR 186

Query: 154 SPETVAN-----------------DPMTNVHSVV---------------NQGFGATIQRI 181
           +PE VAN                 D   + H V+                 GFG     +
Sbjct: 187 NPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIV 246

Query: 182 NGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
           NG LEC      +V  RIG+Y  YC   GV  G NL C
Sbjct: 247 NGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDC 284

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	219
3608477	231	chitinase CHI1 [Citrus sinensis]	1.0	0.948	0.744	3e-95
269927197	227	chitinase [Dimocarpus longan]	0.981	0.947	0.770	6e-95
189014948	240	chitinase [Mangifera indica]	0.812	0.741	0.788	1e-81
330367520	183	basic chitinase [Citrus jambhiri]	0.785	0.939	0.792	2e-79
224146530	270	predicted protein [Populus trichocarpa]	0.863	0.7	0.693	2e-70
224121824	275	predicted protein [Populus trichocarpa]	0.899	0.716	0.654	3e-69
374719241	275	chitinase 7 [Populus x canadensis]	0.899	0.716	0.654	3e-69
344190188	273	class IV chitinase [Corylus heterophylla	0.863	0.692	0.668	4e-69
296084262	251	unnamed protein product [Vitis vinifera]	1.0	0.872	0.561	2e-68
356991137	275	class IV chitinase [Fragaria x ananassa]	0.867	0.690	0.660	3e-68

>gi|3608477|gb|AAC35981.1| chitinase CHI1 [Citrus sinensis]

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 172/231 (74%), Positives = 190/231 (82%), Gaps = 12/231 (5%)

Query: 1   MALFNLNKDSLTFLLFGIFTLAIPTIVVSQ-VANLVTPEFFDGIKNVADPSSPGKSFYTR 59
           MA  N+ K+ +TF L GI  LA PT V+ Q VA++VTP+FFDGIKN A  S  GKSFYTR
Sbjct: 1   MAPLNMKKNIVTFALVGILALAFPTKVMCQNVASIVTPQFFDGIKNQAAASCAGKSFYTR 60

Query: 60  DAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYP 119
           DAFLNAA +YP+FGSGS + SKREIAAFFAHVTHETGHLCY+EEI+KSN YCD  N QYP
Sbjct: 61  DAFLNAAKAYPQFGSGSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYP 120

Query: 120 CVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------MTNVHS 168
           CVPGKFYYGRGPIQLTGNGNYGAAG+AIGFDGL +PETVA DP           MTNVH 
Sbjct: 121 CVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP 180

Query: 169 VVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
           V+NQGFGATIQRINGA+ECGGKQP +VQARIGYY DYCNKFGV+PG NLSC
Sbjct: 181 VMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 231

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|269927197|gb|ACZ52964.1| chitinase [Dimocarpus longan]

 Score =  352 bits (903), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 178/231 (77%), Positives = 190/231 (82%), Gaps = 16/231 (6%)

Query: 1   MALFNLNKDSLTFLLFGIFTLAIPTIVVSQ-VANLVTPEFFDGIKNVADPSSPGKSFYTR 59
           MA+FNL     TF+L  I +LAIP  V+SQ VA++VT EFFDGIKN A     GKSFYTR
Sbjct: 1   MAMFNLK----TFVLVVIVSLAIPRDVISQNVADIVTAEFFDGIKNQAAADCAGKSFYTR 56

Query: 60  DAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYP 119
           D FL+AANSY EFGSGS DDSKREIAAFFAHVTHETGHLCYVEEIDKSN YCD S TQYP
Sbjct: 57  DGFLSAANSYAEFGSGSADDSKREIAAFFAHVTHETGHLCYVEEIDKSNNYCDPSYTQYP 116

Query: 120 CVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------MTNVHS 168
           C PGKFYYGRGP+QLT N NYGAAGQAIGFDGLNSPETVANDP           MTNVHS
Sbjct: 117 CAPGKFYYGRGPLQLTWNYNYGAAGQAIGFDGLNSPETVANDPAIAFKTALWFWMTNVHS 176

Query: 169 VVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
           VVNQGFGATI++INGA+EC GK+P KVQARIGYYTDYC KFGVSPGENLSC
Sbjct: 177 VVNQGFGATIRKINGAVECDGKEPAKVQARIGYYTDYCQKFGVSPGENLSC 227

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|189014948|gb|ACD69683.1| chitinase [Mangifera indica]

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/189 (78%), Positives = 161/189 (85%), Gaps = 11/189 (5%)

Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAH 90
           VA++VT +FFDGIKN A  S  GKSFYTRD FLNAANS+P+FGSGS D+SKREIAAFFAH
Sbjct: 52  VASIVTADFFDGIKNQAAASCAGKSFYTRDGFLNAANSFPQFGSGSADESKREIAAFFAH 111

Query: 91  VTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFD 150
           VTHETGHLCY EEIDKSNAYCD SNTQYPCVPGK YYGRGP+QLT N NYGA G A+GFD
Sbjct: 112 VTHETGHLCYTEEIDKSNAYCDQSNTQYPCVPGKKYYGRGPMQLTWNYNYGACGTAVGFD 171

Query: 151 GLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARI 199
           GLN+PETV+NDP           MTNVHSV+NQGFGATIQ+INGALECGGKQPDKV ARI
Sbjct: 172 GLNAPETVSNDPAVSFKAALWFWMTNVHSVMNQGFGATIQKINGALECGGKQPDKVNARI 231

Query: 200 GYYTDYCNK 208
           GYYTDYC K
Sbjct: 232 GYYTDYCQK 240

Source: Mangifera indica

Species: Mangifera indica

Genus: Mangifera

Family: Anacardiaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|330367520|dbj|BAK19488.1| basic chitinase [Citrus jambhiri]

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 145/183 (79%), Positives = 155/183 (84%), Gaps = 11/183 (6%)

Query: 38  EFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHETGH 97
           +FFDGIKN A  S  GKSFYTRDAFLNAA +YP+FGSGS + SKREIAAFFAHVTHETGH
Sbjct: 1   QFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVSKREIAAFFAHVTHETGH 60

Query: 98  LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPET 157
           LCY+EEI+KSN YCD  N QYPCVPGKFYYGRGPIQLTGNGNYGAAG+AIGFDGL +PET
Sbjct: 61  LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPET 120

Query: 158 VANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYC 206
           VA DP           MTNVH VVNQGFGATIQRINGA+ECGGKQP +VQARIGYY DYC
Sbjct: 121 VAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 180

Query: 207 NKF 209
           NKF
Sbjct: 181 NKF 183

Source: Citrus jambhiri

Species: Citrus jambhiri

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146530|ref|XP_002326040.1| predicted protein [Populus trichocarpa] gi|222862915|gb|EEF00422.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 140/202 (69%), Positives = 156/202 (77%), Gaps = 13/202 (6%)

Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFA 89
           VA++VTPEFF+GI N A     GKSFYTRDAFL+A NSY +FG  GS DDSKREIAAFFA
Sbjct: 69  VADVVTPEFFNGIINQAGGDCAGKSFYTRDAFLSALNSYSQFGKIGSNDDSKREIAAFFA 128

Query: 90  HVTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIG 148
           HVTHETGH CY+EEI+  S+ YCD +NTQYPC P K Y+GRGP+QLT N NYGAAG A  
Sbjct: 129 HVTHETGHFCYIEEINGASHDYCDETNTQYPCNPNKNYFGRGPLQLTWNYNYGAAGGANN 188

Query: 149 FDGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQA 197
           FDGLNSPETVANDP           MTNV  VV QGFGATI+ INGA+EC G     VQA
Sbjct: 189 FDGLNSPETVANDPVVSFKTALWFWMTNVRPVVTQGFGATIRAINGAVECNGGNSGAVQA 248

Query: 198 RIGYYTDYCNKFGVSPGENLSC 219
           RIGYYTDYCN+FGV+PG+NLSC
Sbjct: 249 RIGYYTDYCNQFGVAPGDNLSC 270

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121824|ref|XP_002330662.1| predicted protein [Populus trichocarpa] gi|222872266|gb|EEF09397.1| predicted protein [Populus trichocarpa]

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 138/211 (65%), Positives = 159/211 (75%), Gaps = 14/211 (6%)

Query: 22  AIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDS 80
           A PT  VS V ++VTPEFF GI + AD S  GK+FY+RDAFL A NSY  FG  GS DDS
Sbjct: 66  AAPTNDVS-VPDIVTPEFFGGILDQADSSCAGKNFYSRDAFLEALNSYSRFGRIGSVDDS 124

Query: 81  KREIAAFFAHVTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGN 139
           +REIAAFFAHVTHETGH CY+EEI+  S  YCD  NTQYPC P K YYGRGPIQL+ N N
Sbjct: 125 RREIAAFFAHVTHETGHFCYIEEINGPSRDYCDEGNTQYPCNPDKGYYGRGPIQLSWNFN 184

Query: 140 YGAAGQAIGFDGLNSPETVANDPM-----------TNVHSVVNQGFGATIQRINGALECG 188
           YG AG++IGFDGLNSPETVANDP+            +V  V++QGFGATI+ INGALEC 
Sbjct: 185 YGPAGESIGFDGLNSPETVANDPVISFKTALWYWTNSVQPVISQGFGATIRAINGALECD 244

Query: 189 GKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
           G  P  VQAR+GYYTDYCN+ GV+PG+NL+C
Sbjct: 245 GANPATVQARVGYYTDYCNQLGVAPGDNLTC 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374719241|gb|AEZ67306.1| chitinase 7 [Populus x canadensis]

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 138/211 (65%), Positives = 159/211 (75%), Gaps = 14/211 (6%)

Query: 22  AIPTIVVSQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDS 80
           A PT  VS V ++VTPEFF GI + AD S  GK+FY+RDAFL A NSY  FG  GS DDS
Sbjct: 66  AAPTNDVS-VPDIVTPEFFGGILDQADSSCAGKNFYSRDAFLEALNSYSRFGRIGSVDDS 124

Query: 81  KREIAAFFAHVTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGN 139
           +REIAAFFAHVTHETGH CY+EEI+  S  YCD  NTQYPC P K YYGRGPIQL+ N N
Sbjct: 125 RREIAAFFAHVTHETGHFCYIEEINGPSRDYCDEGNTQYPCNPDKGYYGRGPIQLSWNFN 184

Query: 140 YGAAGQAIGFDGLNSPETVANDPM-----------TNVHSVVNQGFGATIQRINGALECG 188
           YG AG++IGFDGLNSPETVANDP+            +V  V++QGFGATI+ INGALEC 
Sbjct: 185 YGPAGESIGFDGLNSPETVANDPVISFKTALWYWTNSVQPVISQGFGATIRAINGALECD 244

Query: 189 GKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
           G  P  VQAR+GYYTDYCN+ GV+PG+NL+C
Sbjct: 245 GANPATVQARVGYYTDYCNQLGVAPGDNLTC 275

Source: Populus x canadensis

Species: Populus x canadensis

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|344190188|gb|AEM97876.1| class IV chitinase [Corylus heterophylla]

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 135/202 (66%), Positives = 154/202 (76%), Gaps = 13/202 (6%)

Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFA 89
           VA++VT  FF+GI N      PGKSFYTR AFLNA NSY +FG+ G+ DDSKREIAAFFA
Sbjct: 72  VADIVTDAFFNGIINQGTGDCPGKSFYTRAAFLNALNSYTQFGTTGTADDSKREIAAFFA 131

Query: 90  HVTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIG 148
           HVTHETG LC +EE +  S  YCD +NTQYPC P K YYGRGP+QLT N NYGAAG +IG
Sbjct: 132 HVTHETGFLCKIEETNGASQDYCDENNTQYPCNPAKKYYGRGPLQLTWNYNYGAAGNSIG 191

Query: 149 FDGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQA 197
           FDGLN+PETVA D            MTNVHSV+ QGFGAT + INGA+EC GK+PD VQA
Sbjct: 192 FDGLNAPETVATDAVVSFKTALWFWMTNVHSVIGQGFGATTRAINGAVECDGKRPDLVQA 251

Query: 198 RIGYYTDYCNKFGVSPGENLSC 219
           RI YYT YCN+FGV+PG+NLSC
Sbjct: 252 RINYYTQYCNQFGVAPGDNLSC 273

Source: Corylus heterophylla

Species: Corylus heterophylla

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084262|emb|CBI24650.3| unnamed protein product [Vitis vinifera]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/251 (56%), Positives = 169/251 (67%), Gaps = 32/251 (12%)

Query: 1   MALFNLNKDSLTFLLFGIFTLAIPTIVVSQ-------------------VANLVTPEFFD 41
           MA   L   SLT LL GI   A+P  VV Q                   VA++VT +FF+
Sbjct: 1   MASLALRNLSLTVLLAGILAGALPRGVVGQDCGCAADLCCSRWGTNNVSVADIVTQKFFN 60

Query: 42  GIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGHLCY 100
           GI + AD S  GK+FY+R  FL A NS+ +FG  GS +DSKREIAAFFAHVTHETGH CY
Sbjct: 61  GIIDQADASCEGKNFYSRARFLEALNSFSQFGRVGSEEDSKREIAAFFAHVTHETGHFCY 120

Query: 101 VEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVA 159
           +EEI+  S  YCD +NTQYPCV GK YYGRGPIQL+ N NYG AG+ IGFDGLNSPETVA
Sbjct: 121 IEEINGSSRDYCDETNTQYPCVAGKGYYGRGPIQLSWNFNYGPAGEDIGFDGLNSPETVA 180

Query: 160 NDPMTN-----------VHSVVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNK 208
           +DP+ +           V SV++QGFGATI+ INGALEC G     V AR+ YYT+YCN+
Sbjct: 181 SDPVVSFKTALWYWVNFVQSVIDQGFGATIRAINGALECDGANQATVNARVEYYTEYCNQ 240

Query: 209 FGVSPGENLSC 219
            GV+PG+NL+C
Sbjct: 241 LGVTPGDNLTC 251

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356991137|gb|AET44160.1| class IV chitinase [Fragaria x ananassa]

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 134/203 (66%), Positives = 152/203 (74%), Gaps = 13/203 (6%)

Query: 29  SQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAF 87
           S VA++VT +FF+GI N A     GKSFYTR AFL+A  SY +F + GS DD+KREIAAF
Sbjct: 74  SSVADIVTTDFFNGIINQAGSDCAGKSFYTRQAFLDALGSYTDFATTGSADDNKREIAAF 133

Query: 88  FAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAI 147
           FAHVTHETGH CYVEEI+K+  YCDTS T YPC P K YYGRGP+QLT N NYGAAG AI
Sbjct: 134 FAHVTHETGHFCYVEEIEKAT-YCDTSFTNYPCNPAKQYYGRGPLQLTWNYNYGAAGNAI 192

Query: 148 GFDGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQ 196
           GFDG +SPETVA+D            M NVHSV++QGFGAT + INGA+EC GK PDKVQ
Sbjct: 193 GFDGQSSPETVASDSVVAFKTGLWFWMNNVHSVISQGFGATTRAINGAVECDGKAPDKVQ 252

Query: 197 ARIGYYTDYCNKFGVSPGENLSC 219
           ARI YY DYC +  VSPGENL C
Sbjct: 253 ARINYYKDYCTQLNVSPGENLYC 275

Source: Fragaria x ananassa

Species: Fragaria x ananassa

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	219
UNIPROTKB|O04138	285	Cht4 "Chitinase 4" [Oryza sati	0.863	0.663	0.618	6.9e-63
TAIR|locus:2096159	273	EP3 "homolog of carrot EP3-3 c	0.863	0.692	0.633	4.8e-62
TAIR|locus:2043994	264	AT2G43590 [Arabidopsis thalian	0.844	0.700	0.547	1.5e-53
TAIR|locus:2044009	265	AT2G43580 [Arabidopsis thalian	0.844	0.698	0.502	5.2e-49
TAIR|locus:2043919	283	AT2G43620 [Arabidopsis thalian	0.835	0.646	0.485	2.7e-45
TAIR|locus:2044024	277	CHI ""chitinase, putative"" [A	0.821	0.649	0.509	3.4e-45
TAIR|locus:2043934	281	AT2G43610 [Arabidopsis thalian	0.835	0.651	0.485	1.9e-44
UNIPROTKB|P24626	320	Cht3 "Chitinase 3" [Oryza sati	0.593	0.406	0.463	2.2e-38
UNIPROTKB|Q9FRV0	266	rscc "Basic endochitinase C" [	0.639	0.526	0.452	1.2e-37
TAIR|locus:2204918	272	AT1G02360 [Arabidopsis thalian	0.689	0.555	0.409	4e-37

UNIPROTKB|O04138 Cht4 "Chitinase 4" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 125/202 (61%), Positives = 145/202 (71%)

Query:    31 VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGST-DDSKREIAAFFA 89
             V ++VT  FF+GIKN A     GKSFYTR +FLNAA SY  F +  T DDSKREIAAFFA
Sbjct:    84 VESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFA 143

Query:    90 HVTHETGHLCYVEEIDKSNA-YCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIG 148
             HVTHETGH+CY+ EI+ +N  YCD SN Q+PC PGK YYGRGP+Q++ N NYG AG+ IG
Sbjct:   144 HVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIG 203

Query:   149 FDGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQA 197
             FDGL  P+ VA DP           M NVH V++QGFGATI+ INGALEC GK P  V A
Sbjct:   204 FDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNA 263

Query:   198 RIGYYTDYCNKFGVSPGENLSC 219
             R+ YY DYC +FGVSPG NL C
Sbjct:   264 RVNYYKDYCRQFGVSPGGNLYC 285

GO:0004568 "chitinase activity" evidence=IDA

TAIR|locus:2096159 EP3 "homolog of carrot EP3-3 chitinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 128/202 (63%), Positives = 145/202 (71%)

Query:    31 VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFA 89
             VA +VT EFF+GI + A  S  G  FY+R AFL A +SY  FG  GSTDDS+REIAAFFA
Sbjct:    72 VAEIVTQEFFNGIISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFA 131

Query:    90 HVTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIG 148
             HVTHETGH CY+EEID  S  YCD + TQYPC P K YYGRGPIQL+ N NYG AG AIG
Sbjct:   132 HVTHETGHFCYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIG 191

Query:   149 FDGLNSPETVANDPM----------TN-VHSVVNQGFGATIQRINGALECGGKQPDKVQA 197
             FDGLN+PETVA DP+          TN V  V++QGFGATI+ INGALEC G     VQA
Sbjct:   192 FDGLNAPETVATDPVISFKTALWYWTNRVQPVISQGFGATIRAINGALECDGANTATVQA 251

Query:   198 RIGYYTDYCNKFGVSPGENLSC 219
             R+ YYTDYC + GV PG NL+C
Sbjct:   252 RVRYYTDYCRQLGVDPGNNLTC 273

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0010262 "somatic embryogenesis" evidence=IEP

GO:0005618 "cell wall" evidence=IDA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0009626 "plant-type hypersensitive response" evidence=TAS

TAIR|locus:2043994 AT2G43590 [Arabidopsis thaliana (taxid:3702)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 110/201 (54%), Positives = 134/201 (66%)

Query:    31 VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAH 90
             V ++VT  FF+ I N A     GK FYTRD+F+NAAN++P F +  T   +REIA  FAH
Sbjct:    68 VGSIVTQGFFNNIINQAGNGCAGKRFYTRDSFVNAANTFPNFANSVT---RREIATMFAH 124

Query:    91 VTHETGHLCYVEEIDKSNA-YCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGF 149
              THETGH CY+EEI+ +   YC +SNTQYPC PGK Y+GRGPIQL+ N NYGA GQ++G 
Sbjct:   125 FTHETGHFCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLGL 184

Query:   150 DGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQAR 198
             D L  PE V ++P           M +V  V+NQGFGATI+ ING +EC G     V AR
Sbjct:   185 DLLRQPELVGSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNAR 243

Query:   199 IGYYTDYCNKFGVSPGENLSC 219
             IGYY DYC + GV PG NLSC
Sbjct:   244 IGYYRDYCGQLGVDPGPNLSC 264

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

TAIR|locus:2044009 AT2G43580 [Arabidopsis thaliana (taxid:3702)]

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 101/201 (50%), Positives = 131/201 (65%)

Query:    31 VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAH 90
             V N+VT  FF+ I N A     GKSFYTRD+F+NA N++P F +  T   +REIA  FAH
Sbjct:    69 VGNIVTQIFFNNIINQAGNGCAGKSFYTRDSFINATNTFPSFANTVT---RREIATMFAH 125

Query:    91 VTHETGHLCYVEEID-KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGF 149
              T+ETGH CY+EEI+  S   CD +N QYPC P K Y+GRGP+ L+ N NYGA GQ++G 
Sbjct:   126 FTYETGHFCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQSLGL 185

Query:   150 DGLNSPETVANDP-----------MTNVHSVVNQGFGATIQRINGALECGGKQPDKVQAR 198
             D L  PE V+++P           M +V  V+NQGFGATI+ I+G  +C G+    V AR
Sbjct:   186 DLLRQPELVSSNPVVAFRTALWFWMKSVRPVLNQGFGATIRAISG-FDCDGRNLGGVNAR 244

Query:   199 IGYYTDYCNKFGVSPGENLSC 219
             IGYY DYC + G+ PG N++C
Sbjct:   245 IGYYRDYCGQLGLDPGANITC 265

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

TAIR|locus:2043919 AT2G43620 [Arabidopsis thaliana (taxid:3702)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 97/200 (48%), Positives = 124/200 (62%)

Query:    31 VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAH 90
             + N+VTP FFDGI +      P K FYTR AF+ AA S+  +  G+   +KREIAA  A 
Sbjct:    90 IENVVTPAFFDGIMSKVGNGCPAKGFYTRQAFIAAAQSFDAY-KGTV--AKREIAAMLAQ 146

Query:    91 VTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFD 150
              +HE+G  CY EEI +   YC  S T YPC PGK YYGRGPIQ+T N NYGAAG+ +G  
Sbjct:   147 FSHESGSFCYKEEIARGK-YCSPS-TAYPCTPGKDYYGRGPIQITWNYNYGAAGKFLGLP 204

Query:   151 GLNSPETVANDPMT-----------NVHSVVNQGFGATIQRINGALECGGKQPDKVQARI 199
              L  P+ VA  P             NV  V++QGFGAT ++ING  EC G++P  VQ+R+
Sbjct:   205 LLTDPDMVARSPQVAFQCAMWFWNLNVRPVLDQGFGATTRKINGG-ECNGRRPAAVQSRV 263

Query:   200 GYYTDYCNKFGVSPGENLSC 219
              YY ++C   G++PG NLSC
Sbjct:   264 NYYLEFCRTLGITPGANLSC 283

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0048046 "apoplast" evidence=IDA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2044024 CHI ""chitinase, putative"" [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 103/202 (50%), Positives = 123/202 (60%)

Query:    35 VTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAHVTHE 94
             VTP+FF+ I N      PGK FYT D F+ AANSYP FG+     SKREIAAFFAHV  E
Sbjct:    81 VTPDFFNSILNQRG-DCPGKGFYTHDTFMAAANSYPSFGASI---SKREIAAFFAHVAQE 136

Query:    95 TGHLCYVEEID-----KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGF 149
             TG +CY+EEID      S  YCDT   ++PC  GK YYGRG IQL+ N NYG  G+A+  
Sbjct:   137 TGFMCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKGYYGRGAIQLSWNYNYGLCGKALDE 196

Query:   150 DGLNSPETVANDPM-----------TNVHSVVNQGFGATIQRINGALEC-GGKQPDKVQA 197
             + L SPE VA D +           TNV +    GFGATI+ +N   EC GG    K   
Sbjct:   197 NLLASPEKVAQDQVLAFKTAFWFWTTNVRTSFKSGFGATIRAVNSR-ECSGGDSTAKAAN 255

Query:   198 RIGYYTDYCNKFGVSPGENLSC 219
             RI Y+ DYC K GV+PG+NL+C
Sbjct:   256 RIKYFQDYCGKLGVAPGDNLTC 277

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2043934 AT2G43610 [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 97/200 (48%), Positives = 124/200 (62%)

Query:    31 VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGSGSTDDSKREIAAFFAH 90
             +A+++TP FF+ I +      P K FYTR AF+ AA S+  +  G+   +KREIAA  A 
Sbjct:    88 IASVITPAFFNSIMSKVGSGCPAKGFYTRQAFIAAAESFAAY-KGTV--AKREIAAMLAQ 144

Query:    91 VTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFD 150
              +HE+G  CY EEI +   YC  S T YPC PGK YYGRGPIQ+T N NYGAAG+ +G  
Sbjct:   145 FSHESGSFCYKEEIARGR-YCSPSTT-YPCQPGKNYYGRGPIQITWNYNYGAAGKFLGLP 202

Query:   151 GLNSPETVANDPMT-----------NVHSVVNQGFGATIQRINGALECGGKQPDKVQARI 199
              L  P+ VA  P             NV  V++QGFGAT +RING  EC G +P  VQ+R+
Sbjct:   203 LLKDPDMVARSPTVAFQCAMWFWNKNVRPVLSQGFGATTRRINGG-ECNGGRPAAVQSRV 261

Query:   200 GYYTDYCNKFGVSPGENLSC 219
              +Y D+C K GV+PG NLSC
Sbjct:   262 NHYLDFCKKLGVTPGTNLSC 281

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008061 "chitin binding" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|P24626 Cht3 "Chitinase 3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 299 (110.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
 Identities = 70/151 (46%), Positives = 93/151 (61%)

Query:    29 SQVANLVTPEFFDG-IKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAA 86
             S VA++++P  FD  + +  D +   K FYT DAF+ AAN+YP+F + G  D  KRE+AA
Sbjct:    74 SGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAA 133

Query:    87 FFAHVTHET--------------GHLCYVEEIDKSNA--YCDTSNTQYPCVPGKFYYGRG 130
             F A  +HET              G+ C+ EE +  NA  YC+    ++PC  GK YYGRG
Sbjct:   134 FLAQTSHETTGGWPTAPDGPYSWGY-CFKEE-NNGNAPTYCEPK-PEWPCAAGKKYYGRG 190

Query:   131 PIQLTGNGNYGAAGQAIGFDGLNSPETVAND 161
             PIQ+T N NYG AGQAIG D LN+P+ VA+D
Sbjct:   191 PIQITYNYNYGPAGQAIGSDLLNNPDLVASD 221

GO:0004568 "chitinase activity" evidence=IDA

GO:0006040 "amino sugar metabolic process" evidence=ISS

GO:0008061 "chitin binding" evidence=ISS

GO:0008843 "endochitinase activity" evidence=ISS

GO:0016231 "beta-N-acetylglucosaminidase activity" evidence=ISS

GO:0050832 "defense response to fungus" evidence=IDA

UNIPROTKB|Q9FRV0 rscc "Basic endochitinase C" [Secale cereale (taxid:4550)]

 Score = 294 (108.6 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
 Identities = 71/157 (45%), Positives = 96/157 (61%)

Query:    21 LAIPTIVVSQVANLVTPEFFDG-IKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTD 78
             +AI T   S V+++++   FD  + +  D +   K FYT DAF+ AAN++P FG+ GSTD
Sbjct:    16 MAIGTAHGS-VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTD 74

Query:    79 DSKREIAAFFAHVTHET---------GHL----CYVEEIDKSNAYCDTSNTQYPCVPGKF 125
               KR++AAF A  +HET         G      C+ +E   +  YC T + Q+PC PGK 
Sbjct:    75 ARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYC-TPSAQWPCAPGKR 133

Query:   126 YYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP 162
             YYGRGPIQL+ N NYG AG+AIG D L +P+ VA DP
Sbjct:   134 YYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDP 170

GO:0004568 "chitinase activity" evidence=IDA

GO:0005576 "extracellular region" evidence=IC

GO:0016998 "cell wall macromolecule catabolic process" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IDA

TAIR|locus:2204918 AT1G02360 [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
 Identities = 68/166 (40%), Positives = 97/166 (58%)

Query:    11 LTFLLFGIFTLAIPTIVVSQVANLVTPEFFDGIKNVADPSS-PGKSFYTRDAFLNAANSY 69
             L F L   + L+      + +  LV  + ++ I    D ++ P   FYT ++F+ A   +
Sbjct:    10 LCFFLSISYLLSSAQTEATSIERLVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRF 69

Query:    70 PEFGS-GSTDDSKREIAAFFAHVTHET-GH------------LCYVEEIDKSNAYCDTSN 115
             P FGS GS    + E+AAF A ++HET G             LC+ EE+   + YCD+S+
Sbjct:    70 PRFGSVGSPVTQRLEVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSD 129

Query:   116 TQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVAND 161
             TQ+PC P K Y GRGPIQL+ N NYG AG+A+GFDGL +PETV+N+
Sbjct:   130 TQWPCFPNKTYQGRGPIQLSWNYNYGPAGRALGFDGLRNPETVSNN 175

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.14	0.914
3rd Layer	3.2.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00190854 hypothetical protein (271 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	219
cd00325	230	cd00325, chitinase_glyco_hydro_19, Glycoside hydro	9e-93
pfam00182	232	pfam00182, Glyco_hydro_19, Chitinase class I	1e-83
COG3179	206	COG3179, COG3179, Predicted chitinase [General fun	1e-04
cd00442	105	cd00442, lysozyme_like, lysozyme_like domain	2e-04

>gnl|CDD|238199 cd00325, chitinase_glyco_hydro_19, Glycoside hydrolase family 19 chitinase domain

 Score =  270 bits (693), Expect = 9e-93
 Identities = 110/230 (47%), Positives = 127/230 (55%), Gaps = 45/230 (19%)

Query: 35  VTPEFFDGI-KNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVT 92
           VT   F+GI  +  D   P K FYT DAF+ AANS+P FG +G  D  KREIAAFFAH +
Sbjct: 1   VTESLFEGIFSHRNDSGCPAKGFYTYDAFITAANSFPGFGTTGDDDTRKREIAAFFAHTS 60

Query: 93  HETGHLCYVEEID-KSNAYCDTSNT----------QYPCVPGKFYYGRGPIQLTGNGNYG 141
           HETG  CY+      +  YCD S T          Q+PC PGK YYGRGPIQL+ N NYG
Sbjct: 61  HETGGGCYIAPDGPYAWGYCDKSETGPPSSYCDPAQWPCAPGKKYYGRGPIQLSWNYNYG 120

Query: 142 AAGQAIGFDGLNSPETVANDP-----------MTNVHS---------------------V 169
            AG+A+GFD LN+P+ VA DP           MT                          
Sbjct: 121 PAGKALGFDLLNNPDLVATDPVVSFKTAIWFWMTPQGPKPSCHDVITGTWTPSAADTAAG 180

Query: 170 VNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
              GFGAT   ING LECGG  PD+VQ RIGYY  YC+  GVSPG+NL C
Sbjct: 181 RGPGFGATTNIINGGLECGGGNPDQVQNRIGYYKRYCDMLGVSPGDNLDC 230

Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. Length = 230

>gnl|CDD|201064 pfam00182, Glyco_hydro_19, Chitinase class I

 Score =  247 bits (633), Expect = 1e-83
 Identities = 105/232 (45%), Positives = 124/232 (53%), Gaps = 46/232 (19%)

Query: 34  LVTPEFFDGI-KNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHV 91
           +VT   FD + K+  D + PGK FYT DAF+ AANS+P FG +G  D  KREIAAFFA  
Sbjct: 1   IVTRSLFDQMLKHRNDGACPGKGFYTYDAFIAAANSFPGFGTTGDDDTRKREIAAFFAQT 60

Query: 92  THETGHLCYVEEID-KSNAYCD-----------TSNTQYPCVPGKFYYGRGPIQLTGNGN 139
           +HET    Y       +  YC            T + Q+PC PGK YYGRGPIQL+ N N
Sbjct: 61  SHETTGGWYTAPDGPYAWGYCFVREQNPPSDYCTPSAQWPCAPGKKYYGRGPIQLSWNYN 120

Query: 140 YGAAGQAIGFDGLNSPETVANDP-----------MTN------VHSVVNQ---------- 172
           YG AGQAIGFD LN+P+ VA DP           MT        H V+            
Sbjct: 121 YGPAGQAIGFDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGQWTPSAADSA 180

Query: 173 -----GFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                GFG     ING LECGG    +VQ RIG+Y  YC++ GVSPG NL C
Sbjct: 181 AGRVPGFGVITNIINGGLECGGGNNARVQDRIGFYKRYCDQLGVSPGNNLDC 232

Length = 232

>gnl|CDD|225720 COG3179, COG3179, Predicted chitinase [General function prediction only]

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 44/151 (29%)

Query: 79  DSKREIAAFFAHVTHETGHLCYVEE---------------------IDKSNAYC------ 111
            +    A F A V HE+G    ++E                       +  A        
Sbjct: 37  TTPLRQAMFLAQVMHESGGFTRLDENLNYSAQGLLQTFPKRFPDFRYAREIAGNPPAIAN 96

Query: 112 -----DTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMT-- 164
                   N       G  Y GRG IQ+TG  NY   G+A+G D + +P  +  DP    
Sbjct: 97  RVYGTRLGNGPEKSGDGWLYRGRGLIQITGRDNYRRCGRALGLDLVANPGQLELDPHAAR 156

Query: 165 ---------NVHSVVNQGFGATI-QRINGAL 185
                     ++++ ++G    + ++ING L
Sbjct: 157 VAAWYWKTRGLNALADEGDLVRVTRKINGGL 187

Length = 206

>gnl|CDD|238249 cd00442, lysozyme_like, lysozyme_like domain

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 102 EEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVAND 161
            E     AY D         PG+  YG G  QLT   +     + IG   L        +
Sbjct: 9   SEGTDLKAYKD--RGHGTLNPGERGYGIGLYQLTSRWSDAYRARGIGLKLLAQLILKLFN 66

Query: 162 P 162
           P
Sbjct: 67  P 67

This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	219
cd00325	230	chitinase_glyco_hydro_19 Glycoside hydrolase famil	100.0
PF00182	232	Glyco_hydro_19: Chitinase class I; InterPro: IPR00	100.0
KOG4742	286	consensus Predicted chitinase [General function pr	100.0
COG3179	206	Predicted chitinase [General function prediction o	100.0
cd00442	105	lysozyme_like lysozyme_like domain. This contains	98.97

>cd00325 chitinase_glyco_hydro_19 Glycoside hydrolase family 19 chitinase domain

Probab=100.00  E-value=7.5e-60  Score=409.22  Aligned_cols=185  Identities=59%  Similarity=1.091  Sum_probs=168.7

Q ss_pred             CCHHHHHhccccC-CCCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCCceehhccCCCC-CCc
Q 043794           35 VTPEFFDGIKNVA-DPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSN-AYC  111 (219)
Q Consensus        35 iT~~~f~~i~p~~-~~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~f~~~~E~~~~~-~Y~  111 (219)
                      ||+++|++|||++ +..|++++||||++|++|+++||.|++ |++.++++|+||||||++|||++|++++|....+ .||
T Consensus         1 ~t~~~f~~~~~~~~~~~c~~~~fYTy~~fi~Aa~~fp~f~~~g~~~~~krElAaFlAq~~hETgg~~~~~e~~~~~~g~c   80 (230)
T cd00325           1 VTESLFEGIFSHRNDSGCPAKGFYTYDAFITAANSFPGFGTTGDDDTRKREIAAFFAHTSHETGGGCYIAPDGPYAWGYC   80 (230)
T ss_pred             CCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHhccccccCCCchhhHHHHHHHHhhhcccCCCCccccccccccCCcc
Confidence            7999999999997 567999999999999999999999998 9999999999999999999999999999876543 455


Q ss_pred             cCCC----------CCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C------c
Q 043794          112 DTSN----------TQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M------T  164 (219)
Q Consensus       112 ~~~n----------~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~------~  164 (219)
                      +...          ..|+|+||++|||||+||||||+||+++++++|+|||+|||+|++|+           |      +
T Consensus        81 ~~~e~~~~~~~~~~~~~pc~dG~~Y~GRG~iQLT~~~NY~~~g~~lg~dll~~Pdlva~dp~~a~~sA~WfW~t~~~~k~  160 (230)
T cd00325          81 DKSETGPPSSYCDPAQWPCAPGKKYYGRGPIQLSWNYNYGPAGKALGFDLLNNPDLVATDPVVSFKTAIWFWMTPQGPKP  160 (230)
T ss_pred             ccccCCCcccccccCCCCCCcccccccCCceeeeehhhHHHHHHHhCCccccCHHHHhcCchhhhhhhhhheeeCCCCCC
Confidence            4321          46899999999999999999999999999999999999999999977           2      4


Q ss_pred             chhhhh---------------ccChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          165 NVHSVV---------------NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       165 ~~~~~a---------------d~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                      ++|++|               .+||+.||+|||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       161 s~h~vi~g~w~p~~~d~a~~~~~gfg~tt~iINGg~EC~~~~~~~~~~Ri~~Y~~~~~~lgv~~g~nL~C  230 (230)
T cd00325         161 SCHDVITGTWTPSAADTAAGRGPGFGATTNIINGGLECGGGNPDQVQNRIGYYKRYCDMLGVSPGDNLDC  230 (230)
T ss_pred             CcceeeccCcCCchhhhhccccCChhhhheeecCCcccCCCCchHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            678776               1579999999999999999999999999999999999999999999999

Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different en

>PF00182 Glyco_hydro_19: Chitinase class I; InterPro: IPR000726 O-Glycosyl hydrolases 3

Probab=100.00  E-value=1.3e-59  Score=408.53  Aligned_cols=185  Identities=56%  Similarity=1.036  Sum_probs=152.2

Q ss_pred             CCCHHHHHhccccCC-CCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCCceehhccCCCC---
Q 043794           34 LVTPEFFDGIKNVAD-PSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSN---  108 (219)
Q Consensus        34 ~iT~~~f~~i~p~~~-~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~f~~~~E~~~~~---  108 (219)
                      |||+++|++|||+++ ..|++++||||++||+|+++||+|++ |++.+++||+||||||++|||++|.+++|.....   
T Consensus         1 ivt~~~F~~~~~~~n~~~c~~~~FYTY~~Fi~Aa~~fp~F~~tG~~~~~krElAAFLA~~~hET~g~~~~~e~~~~~~gy   80 (232)
T PF00182_consen    1 IVTESFFNQMFPHRNDNGCPGKGFYTYDAFIAAAKSFPAFGNTGDDEDRKRELAAFLAQVSHETGGFWYIEEIGPYAWGY   80 (232)
T ss_dssp             TS-HHHHHHHTTTTTSTTSTTTTTS-HHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTTTTTTTBTTSGGGGTT
T ss_pred             CCCHHHHHHHHhcCCccCCCCCCcccHHHHHHHhhcCchhccCccHHHHHHHHHhhhcccchhccccccccccccccccc
Confidence            699999999999976 78999999999999999999999998 9999999999999999999999999988865321   


Q ss_pred             ----------CCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C----
Q 043794          109 ----------AYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M----  163 (219)
Q Consensus       109 ----------~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~----  163 (219)
                                .||+. +..|+|+||++|||||+|||||++||+++++++|+|||+|||||++|+           |    
T Consensus        81 c~~~e~~~~~~y~~~-~~~~p~~~g~~Y~GRG~iQLT~~~NY~~~g~~lg~dl~~nP~lv~~d~~~a~~sA~wfW~~~~~  159 (232)
T PF00182_consen   81 CYKREKGANSDYCNR-NGNYPCGDGKKYYGRGPIQLTWNYNYGAFGEALGLDLLNNPDLVATDPWLAFKSAIWFWMTPQP  159 (232)
T ss_dssp             S-SB-SS-SSGG--T-TSSS--TTTTGGS-BTTTTB-SHHHHHHHHHHHTS-TTT-TTHHHH-HHHHHHHHHHHHHHSBT
T ss_pred             ccccccCCccccccC-ccCccCCCCCeEecccccccchhhhHHHHHHHhCCccccChHHHHhhHHHHHHhhhhheeecCC
Confidence                      34443 357889999999999999999999999999999999999999999987           2    


Q ss_pred             --cchhhhhc---------------cChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          164 --TNVHSVVN---------------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       164 --~~~~~~ad---------------~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                        +++|+++.               +|||.||+|||||+||+++++.++.+|+++|+++|++|||+||+||+|
T Consensus       160 ~~ps~h~vi~~~w~p~~~~~~~~r~~gfG~t~~iINgg~Ec~~~~~~~~~~Ri~~y~~~~~~~~v~~g~nl~C  232 (232)
T PF00182_consen  160 PKPSCHDVITGQWTPSAADLAAGRVPGFGATTNIINGGLECGGGNTDQVQNRIGYYKRYCDMLGVDPGDNLDC  232 (232)
T ss_dssp             TBSSHHHHHTTSS-HHHHHHHTTTTSSHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHT----S----
T ss_pred             CccCcchhcccccCCchhhhhhccCCCcchhhhhccCccccCCCCchHHhHHHHHHHHHHHHhCCCCCCCCCC
Confidence              47888873               489999999999999999999999999999999999999999999999

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 19 GH19 from CAZY comprises enzymes with only one known activity; chitinase (3.2.1.14 from EC). Chitinases [] are enzymes that catalyse the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Chitinases belong to glycoside hydrolase families 18 or 19 []. Chitinases of family 19 (also known as classes IA or I and IB or II) are enzymes from plants that function in the defence against fungal and insect pathogens by destroying their chitin-containing cell wall. Class IA/I and IB/II enzymes differ in the presence (IA/I) or absence (IB/II) of a N-terminal chitin-binding domain. The catalytic domain of these enzymes consist of about 220 to 230 amino acid residues.; GO: 0004568 chitinase activity, 0006032 chitin catabolic process, 0016998 cell wall macromolecule catabolic process; PDB: 3IWR_A 2DKV_A 3CQL_A 2Z38_A 2Z37_D 2Z39_B 1DXJ_A 1WVU_B 1WVV_B 2DBT_C ....

>KOG4742 consensus Predicted chitinase [General function prediction only]

Probab=100.00  E-value=2e-53  Score=375.16  Aligned_cols=190  Identities=58%  Similarity=1.024  Sum_probs=173.6

Q ss_pred             cccCCCCHHHHHhccccCCCC-CCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccC---------C--
Q 043794           30 QVANLVTPEFFDGIKNVADPS-SPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHET---------G--   96 (219)
Q Consensus        30 ~v~~~iT~~~f~~i~p~~~~~-~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hET---------g--   96 (219)
                      .++++||+++|+.||++++.+ |++++||||++|+.|.+.|++||+ |...+.+||+|+||||+.|||         |  
T Consensus        61 ~i~~~~T~~~F~~i~~~~~~g~c~~~gfyty~aFi~Aa~sfp~fg~t~~~~~~kreiAaf~ah~~~ETs~g~~~~~~G~~  140 (286)
T KOG4742|consen   61 KIESSVTPELFEDIFSKVGSGWCPAKGFYTYDAFIIAARSFPEFGGTGNKNTAKREIAAFFAHVTHETSGGSNCAPRGPF  140 (286)
T ss_pred             cccccccHHHHHHHhccccCCCCCCCCCccccHHHHHHHhcccccccCcccccchhhhhhhhhheecccCcccccCCCcc
Confidence            489999999999999998776 999999999999999999999998 888899999999999999999         6  


Q ss_pred             --CceehhccCC-CCCCccCCCCC-CcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC----------
Q 043794           97 --HLCYVEEIDK-SNAYCDTSNTQ-YPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP----------  162 (219)
Q Consensus        97 --~f~~~~E~~~-~~~Y~~~~n~~-y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~----------  162 (219)
                        +|++.+|+.. ...||+.++.. |||..|+.|+|||+|||+|+|||++++++||+|||+|||+|++|+          
T Consensus       141 ~~~fc~~~e~s~~~~~YC~~s~~~~yPCs~gk~Y~GRG~iQlsWNyNYG~ag~alg~dLL~~Pe~V~~np~lAf~~alWf  220 (286)
T KOG4742|consen  141 YWGFCYKEEISPSSGRYCDASNQITYPCSPGKSYYGRGPIQLSWNYNYGAAGKALGLDLLRNPELVAMNPVLAFKAALWF  220 (286)
T ss_pred             ccCcccccccChhhhccCCcccceEeecCCCCcccccCcccccccccccHhHhhcCchhhcCcchhccCchhhhheeeee
Confidence              8999999987 55899998877 999999999999999999999999999999999999999999888          


Q ss_pred             -Cc----chhhhh---ccChhhhhhhhcCccccCCCCch-hHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          163 -MT----NVHSVV---NQGFGATIQRINGALECGGKQPD-KVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       163 -~~----~~~~~a---d~gf~~~t~~INGglEc~~~~~~-g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                       |+    .+++.+   .+|||.||++|||++||++++.+ ..++|+++|+.+|++|||+||+||+|
T Consensus       221 wmt~~~p~~~~~a~~~~~gFGaTt~~Ing~~EC~~~~~~~~~~~Ri~~y~~~c~~fGv~pG~nLsC  286 (286)
T KOG4742|consen  221 WMTPVRPVLNDFAAYDTPGFGATTRAINGDLECGGGNLDGVKARRIKYYLAYCGLFGVNPGPNLSC  286 (286)
T ss_pred             eccCCchhhhhhhcccCCCcchhhhhhccceeccCCCCCcchhHHHHHHHHHHHhhCCCCCCCCCC
Confidence             33    334433   25899999999999999999854 55569999999999999999999999

>COG3179 Predicted chitinase [General function prediction only]

Probab=100.00  E-value=9.3e-37  Score=254.92  Aligned_cols=158  Identities=25%  Similarity=0.373  Sum_probs=137.1

Q ss_pred             CCCCHHHHHhccccCCCCCCCCCcccHHHHHHHHhc-ccccCCCCCCCCHHHHHHhhhhccccCCCceehhccCCCC---
Q 043794           33 NLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANS-YPEFGSGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSN---  108 (219)
Q Consensus        33 ~~iT~~~f~~i~p~~~~~~~~~~~yt~~~f~~a~n~-~~~fg~g~~i~t~~~~A~FLAq~~hETg~f~~~~E~~~~~---  108 (219)
                      ..||+.+|.+|+|++.+        ....++.|+.. +.+||    |++|.|+||||||++||||+|..+.|+.++|   
T Consensus         2 ~~i~e~~~~ki~p~a~k--------~~~~v~~al~~~l~~~g----i~~p~r~AmFlAQ~~HESggf~rl~EnlnYSaq~   69 (206)
T COG3179           2 KTITEVDLRKIFPKARK--------EFVDVIVALQPALDEAG----ITTPLRQAMFLAQVMHESGGFTRLDENLNYSAQG   69 (206)
T ss_pred             cchhHHHHHHhcchhhh--------hhHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHhhhcCCceeehhhcchHHHH
Confidence            46899999999998642        13556777776 68998    9999999999999999999999999998875   


Q ss_pred             -------CCc----------------------cCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccc
Q 043794          109 -------AYC----------------------DTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVA  159 (219)
Q Consensus       109 -------~Y~----------------------~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva  159 (219)
                             .|-                      +.+|.+..++|||+|||||.|||||+.||..+++++|.||+.||+++.
T Consensus        70 L~~tf~~r~~~~~~a~~~~g~p~aian~~y~~RlGN~~e~sgDGw~yRgrg~iQiTGrdNY~~~g~alg~dlv~~P~~~~  149 (206)
T COG3179          70 LLQTFPKRFPDFRYAREIAGNPPAIANRVYGTRLGNGPEKSGDGWLYRGRGLIQITGRDNYRRCGRALGLDLVANPGQLE  149 (206)
T ss_pred             HHHhccccCCchhhhhhhccChHHHHhhhhcccccCCCCCCCCceeeccCcceeeecchHHHHHHHhhCCCccCChhhhc
Confidence                   111                      125666678999999999999999999999999999999999999999


Q ss_pred             cCC-----------CcchhhhhccC-hhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHc
Q 043794          160 NDP-----------MTNVHSVVNQG-FGATIQRINGALECGGKQPDKVQARIGYYTDYCNKF  209 (219)
Q Consensus       160 ~~~-----------~~~~~~~ad~g-f~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~l  209 (219)
                      .++           .++|+.++|+| +..||++||||+       ||++||.+.|+++..++
T Consensus       150 ~~~~~a~~a~wyw~~~g~n~~aD~gd~~~VT~~INGG~-------NG~~dR~~r~~~a~~v~  204 (206)
T COG3179         150 LDPHAARVAAWYWKTRGLNALADEGDLVRVTRKINGGL-------NGLDDRLARYRRASGVL  204 (206)
T ss_pred             cChHhhhhHHHHHHhccHHHhhccCChhhhhhhhcCcc-------ccHHHHHHHHHHHhccc
Confidence            987           26899999887 999999999996       99999999999987654

>cd00442 lysozyme_like lysozyme_like domain

Probab=98.97  E-value=1.4e-10  Score=88.97  Aligned_cols=67  Identities=22%  Similarity=0.146  Sum_probs=58.7

Q ss_pred             HHhhhhccccCCCceehhccCCCCCCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC
Q 043794           85 AAFFAHVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP  162 (219)
Q Consensus        85 A~FLAq~~hETg~f~~~~E~~~~~~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~  162 (219)
                      |.|.++..||+.+++..++.    .||       +|..|..|+|||++|+||++||...++.+++|++++|++++.++
T Consensus         1 a~~~~i~~~E~~~~~~~~~~----Gy~-------~~~~~~~~~~~G~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (105)
T cd00442           1 AIIDMLASSEGTDLKAYKDR----GHG-------TLNPGERGYGIGLYQLTSRWSDAYRARGIGLKLLAQLILKLFNP   67 (105)
T ss_pred             ChhhhhhhcccCCCcccccC----CCC-------CCCCCCcccccCceeeeeccCccccccccCcchhcCcchhccCc
Confidence            57899999999999877763    265       56667889999999999999999999999999999999999886

This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	219
3hbd_A	204	Class Iv Chitinase Structure From Picea Abies At 1.		1e-47
2z38_A	247	Crystal Structure Of Chloride Bound Brassica Juncea		2e-39
2z37_A	244	Crystal Structure Of Brassica Juncea Chitinase Cata		2e-39
2z39_A	246	Crystal Structure Of Brassica Juncea Chitinase Cata		9e-39
4dwx_A	244	Crystal Structure Of A Family Gh-19 Chitinase From		2e-36
3w3e_A	242	Structure Of Vigna Unguiculata Chitinase With Regul		8e-35
3cql_A	243	Crystal Structure Of Gh Family 19 Chitinase From Ca		1e-34
1wvu_A	265	Crystal Structure Of Chitinase C From Streptomyces		2e-33
1wvv_A	265	Crystal Structure Of Chitinase C Mutant E147q Lengt		6e-33
1dxj_A	242	Structure Of The Chitinase From Jack Bean Length =		4e-32
2baa_A	243	The Refined Crystal Structure Of An Endochitinase F		8e-32
2cjl_A	204	Crystal Structure And Enzymatic Properties Of A Bac		4e-31
1cns_A	243	Crystal Structure Of Chitinase At 1.91a Resolution		1e-30
2dkv_A	309	Crystal Structure Of Class I Chitinase From Oryza S		9e-27

>pdb|3HBD|A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a Length = 204

Iteration: 1
 Score =  186 bits (471), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/205 (47%), Positives = 131/205 (63%), Gaps = 18/205 (8%)
Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFA 89
           V  +++  FF+G+   A  S  GK FYT +AF+ AAN+Y  FG+ GS D  KRE+AAFFA
Sbjct: 2   VGGIISQSFFNGLAGGAASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAFFA 61
Query: 90  HVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGF 149
           +V HETG LCY+ E +    YC +S+T +PC  GK Y+GRGP+QL+ N NYGAAG++IGF
Sbjct: 62  NVMHETGGLCYINEKNPPINYCQSSST-WPCTSGKSYHGRGPLQLSWNYNYGAAGKSIGF 120
Query: 150 DGLNSPETVANDPM-------------TNVHSVVN--QGFGATIQRINGALECGGKQPDK 194
           DGLN+PE V  D               +N HS +   QGFG TI+ IN ++EC G    +
Sbjct: 121 DGLNNPEKVGQDSTISFKTAVWFWMKNSNCHSAITSGQGFGGTIKAIN-SMECNGGNSGE 179
Query: 195 VQARIGYYTDYCNKFGVSPGENLSC 219
           V +R+ YY   C++ GV PG N+SC
Sbjct: 180 VSSRVNYYKKICSQLGVDPGANVSC 204

>pdb|2Z38|A Chain A, Crystal Structure Of Chloride Bound Brassica Juncea Chitinase Catalytic Module (Bjchi3) Length = 247

Iteration: 1
 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 119/228 (52%), Gaps = 46/228 (20%)
Query: 38  EFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVTHET- 95
           +F+  +K++ D       F+T DAF+ AA S+P FG +G     K+EIAAFF   +HET 
Sbjct: 13  QFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETT 72
Query: 96  ------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAA 143
                          CY EEIDKS+ +CD++N ++PC PGKFYYGRGP+ L+ N NYG  
Sbjct: 73  GGWSGAPDGANTWGYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPC 132
Query: 144 GQAIGFDGLNSPETVANDPMT-----------------NVHSVVNQ-------------- 172
           G+ +G + L +P+  ++DP+                  + H V+                
Sbjct: 133 GRDLGLELLKNPDVASSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSAADISAGRL 192
Query: 173 -GFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
            G+G     ING LEC G+   KVQ RI +YT YC  FGV PG N+ C
Sbjct: 193 PGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC 240

>pdb|2Z37|A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) Length = 244

Iteration: 1
 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 119/228 (52%), Gaps = 46/228 (20%)
Query: 38  EFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVTHET- 95
           +F+  +K++ D       F+T DAF+ AA S+P FG +G     K+EIAAFF   +HET 
Sbjct: 10  QFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETT 69
Query: 96  ------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAA 143
                          CY EEIDKS+ +CD++N ++PC PGKFYYGRGP+ L+ N NYG  
Sbjct: 70  GGWSGAPDGANTWGYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPC 129
Query: 144 GQAIGFDGLNSPETVANDPMT-----------------NVHSVVNQ-------------- 172
           G+ +G + L +P+  ++DP+                  + H V+                
Sbjct: 130 GRDLGLELLKNPDVASSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSAADISAGRL 189
Query: 173 -GFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
            G+G     ING LEC G+   KVQ RI +YT YC  FGV PG N+ C
Sbjct: 190 PGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC 237

>pdb|2Z39|A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module Glu234ala Mutant (bjchi3-e234a) Length = 246

Iteration: 1
 Score =  156 bits (394), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 118/228 (51%), Gaps = 46/228 (20%)
Query: 38  EFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVTHET- 95
           +F+  +K++ D       F+T DAF+ AA S+P FG +G     K+EIAAFF   +HET 
Sbjct: 12  QFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETT 71
Query: 96  ------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAA 143
                          CY E IDKS+ +CD++N ++PC PGKFYYGRGP+ L+ N NYG  
Sbjct: 72  GGWSGAPDGANTWGYCYKEAIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPC 131
Query: 144 GQAIGFDGLNSPETVANDPMT-----------------NVHSVVNQ-------------- 172
           G+ +G + L +P+  ++DP+                  + H V+                
Sbjct: 132 GRDLGLELLKNPDVASSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSAADISAGRL 191
Query: 173 -GFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
            G+G     ING LEC G+   KVQ RI +YT YC  FGV PG N+ C
Sbjct: 192 PGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC 239

>pdb|4DWX|A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds Length = 244

Iteration: 1
 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 123/236 (52%), Gaps = 48/236 (20%)
Query: 31  VANLVTPEFFDG-IKNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFF 88
           V+++++   FD  + +  D +   K FYT DAF+ AAN++P FG +GSTD  KR++AAF 
Sbjct: 3   VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFL 62
Query: 89  AHVTHET-------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
           A  +HET                C+ +E   +  YC T + Q+PC PGK YYGRGPIQL+
Sbjct: 63  AQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYC-TPSAQWPCAPGKRYYGRGPIQLS 121
Query: 136 GNGNYGAAGQAIGFDGLNSPETVANDPMTNV-----------------HSVVN------- 171
            N NYG AG+AIG D L +P+ VA DP  +                  H+V+        
Sbjct: 122 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 181
Query: 172 --------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    GFG     ING LECG  Q  +V  RIG+Y  YC+  GV  G+NL C
Sbjct: 182 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 237

>pdb|3W3E|A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall Length = 242

Iteration: 1
 Score =  143 bits (360), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 121/238 (50%), Gaps = 50/238 (21%)
Query: 29  SQVANLVTPEFFDGI-KNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAA 86
           ++V +++    FD + K+  D +  GK FY+ +AF+ AA S+  FG+ G ++  KRE+AA
Sbjct: 1   AEVGSVIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAA 60
Query: 87  FFAHVTHET-------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQ 133
           F A  +HET                C+V E DKSN YCD S    PC  GK YYGRGPIQ
Sbjct: 61  FLAQTSHETTGGAATSPDGPYAWGYCFVTERDKSNRYCDGSG---PCSAGKSYYGRGPIQ 117
Query: 134 LTGNGNYGAAGQAIGFDGLNSPETVANDPMT-----------------NVHSVVNQ---- 172
           LT N NY AAG+A+G D +N+P+ VA D +                  + H V+      
Sbjct: 118 LTHNYNYNAAGRALGVDLINNPDLVARDAVVSFKTALWFWMTPQGNKPSCHDVITNRWTP 177
Query: 173 -----------GFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                      GFG     ING LECG         RIG+Y  YC+ FGVS G NL+C
Sbjct: 178 SAADKAANRVPGFGVITNIINGGLECGKGPTPASGDRIGFYKRYCDVFGVSYGPNLNC 235

>pdb|3CQL|A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya Length = 243

Iteration: 1
 Score =  142 bits (358), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 118/236 (50%), Gaps = 48/236 (20%)
Query: 31  VANLVTPEFFDG-IKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFF 88
           +  +++   FD  +K+  +P+ P K FYT DAF+ AA S+P FG+ GSTD  KREIAAF 
Sbjct: 2   IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFL 61
Query: 89  AHVTHET-------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
              +HET                C+++E + S+ YC  S  +YPC PGK YYGRGPIQL+
Sbjct: 62  GQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPS-PRYPCAPGKSYYGRGPIQLS 120
Query: 136 GNGNYGAAGQAIGFDGLNSPETVAND-----------------PMTNVHSVVN------- 171
            N NYG  G+A+  + L +P+ VA D                 P  + H V+        
Sbjct: 121 WNYNYGPCGEALRVNLLGNPDLVATDRVISFKTALWFWMTPQAPKPSCHDVITGRWQPSA 180
Query: 172 --------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    G+G     ING LECG     +V  RIG++  YC   GV  G NL C
Sbjct: 181 ADTAAGRLPGYGVITNIINGGLECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDC 236

>pdb|1WVU|A Chain A, Crystal Structure Of Chitinase C From Streptomyces Griseus Hut6037 Length = 265

Iteration: 1
 Score =  138 bits (347), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/189 (43%), Positives = 113/189 (59%), Gaps = 25/189 (13%)
Query: 55  SFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSN--AYC 111
           +FYT     +A ++YP F  +GS +  KRE AAF A+V+HETG L Y++E++++N   YC
Sbjct: 78  AFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHETGGLFYIKEVNEANYPHYC 137
Query: 112 DTSNTQYPCVPGKF-YYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-------- 162
           DT+ + Y C  G+  YYGRGPIQL+ N NY AAG A+G + L +P  V  DP        
Sbjct: 138 DTTQS-YGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLANPYLVEQDPAVAWKTGL 196
Query: 163 -----------MTNVHSVVNQ-GFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFG 210
                      MT  +++VN  GFG TI+ INGALEC G  P +VQ+RI  +T +    G
Sbjct: 197 WYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFTQILG 256
Query: 211 VSPGENLSC 219
            + G NLSC
Sbjct: 257 TTTGPNLSC 265

>pdb|1WVV|A Chain A, Crystal Structure Of Chitinase C Mutant E147q Length = 265

Iteration: 1
 Score =  137 bits (344), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/189 (43%), Positives = 113/189 (59%), Gaps = 25/189 (13%)
Query: 55  SFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSN--AYC 111
           +FYT     +A ++YP F  +GS +  KRE AAF A+V+H+TG L Y++E++++N   YC
Sbjct: 78  AFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHQTGGLFYIKEVNEANYPHYC 137
Query: 112 DTSNTQYPCVPGKF-YYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-------- 162
           DT+ + Y C  G+  YYGRGPIQL+ N NY AAG A+G + L +P  V  DP        
Sbjct: 138 DTTQS-YGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLANPYLVEQDPAVAWKTGL 196
Query: 163 -----------MTNVHSVVNQ-GFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFG 210
                      MT  +++VN  GFG TI+ INGALEC G  P +VQ+RI  +T +    G
Sbjct: 197 WYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFTQILG 256
Query: 211 VSPGENLSC 219
            + G NLSC
Sbjct: 257 TTTGPNLSC 265

>pdb|1DXJ|A Chain A, Structure Of The Chitinase From Jack Bean Length = 242

Iteration: 1
 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 116/236 (49%), Gaps = 50/236 (21%)
Query: 31  VANLVTPEFFDGI-KNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFF 88
           V +++    FD + K+  DP+  GK FY+ +AF+ AA S+  FG+ G T+  KRE+AAF 
Sbjct: 2   VGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFL 61
Query: 89  AHVTHET-------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
           A  +HET                C+V E DKSN YCD      PC  GK YYGRGPIQLT
Sbjct: 62  AQTSHETTGGAAGSPDGPYAWGYCFVTERDKSNKYCDPGT---PCPAGKSYYGRGPIQLT 118
Query: 136 GNGNYGAAGQAIGFDGLNSPETVAND--------------PMTN---VHSVVNQ------ 172
            N NY  AG+A+G D +N+P+ VA D              P  N    H V+        
Sbjct: 119 HNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSA 178
Query: 173 ---------GFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    GFG     ING +ECG         RIG+Y  YC+   +S G NL+C
Sbjct: 179 ADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC 234

>pdb|2BAA|A Chain A, The Refined Crystal Structure Of An Endochitinase From Hordeum Vulgare L. Seeds To 1.8 Angstroms Resolution Length = 243

Iteration: 1
 Score =  133 bits (334), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 121/236 (51%), Gaps = 48/236 (20%)
Query: 31  VANLVTPEFFDG-IKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFF 88
           V+++V+   FD  + +  D +   K FYT DAF+ AA ++P FG+ GS D  KRE+AAF 
Sbjct: 2   VSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFL 61
Query: 89  AHVTHET-------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
           A  +HET                C+ +E   S+ YC T + Q+PC PGK YYGRGPIQL+
Sbjct: 62  AQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYC-TPSAQWPCAPGKRYYGRGPIQLS 120
Query: 136 GNGNYGAAGQAIGFDGLNSPETVAND-----------------PMTNVHSVVN------- 171
            N NYG AG+AIG D L +P+ VA D                 P  + H+V+        
Sbjct: 121 HNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSG 180
Query: 172 --------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    GFG     ING +ECG  Q  +V  RIG+Y  YC+  GV  G NL C
Sbjct: 181 ADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 236

>pdb|2CJL|A Chain A, Crystal Structure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes Length = 204

Iteration: 1
 Score =  131 bits (329), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/189 (45%), Positives = 105/189 (55%), Gaps = 25/189 (13%)
Query: 55  SFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSN--AYC 111
           SFYT      A ++YP F  +GS    K+E AAF A+V HETG L YV E + +N   YC
Sbjct: 17  SFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETGGLVYVVEQNTANYPHYC 76
Query: 112 DTSNTQYPCVPGK-FYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-------- 162
           D S   Y C  G   YYGRGP+QL+ N NY AAG A+G D LN+P+ V ND         
Sbjct: 77  DASQP-YGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLVQNDSAVAWKTGL 135
Query: 163 -----------MTNVHSVVN-QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFG 210
                      MT   ++VN  GFG TI+ ING+LEC G  P +VQ+RI  Y  +    G
Sbjct: 136 WYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLG 195
Query: 211 VSPGENLSC 219
           V PG NLSC
Sbjct: 196 VEPGGNLSC 204

>pdb|1CNS|A Chain A, Crystal Structure Of Chitinase At 1.91a Resolution Length = 243

Iteration: 1
 Score =  129 bits (324), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 120/236 (50%), Gaps = 48/236 (20%)
Query: 31  VANLVTPEFFDG-IKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFF 88
           V+++V+   FD  + +  D +   K FYT DAF+ AA ++  FG+ GS D  KRE+AAF 
Sbjct: 2   VSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFSGFGTTGSADVQKREVAAFL 61
Query: 89  AHVTHET-------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
           A  +HET                C+ +E   S+ YC T + Q+PC PGK YYGRGPIQL+
Sbjct: 62  AQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYC-TPSAQWPCAPGKRYYGRGPIQLS 120
Query: 136 GNGNYGAAGQAIGFDGLNSPETVAND-----------------PMTNVHSVV-------- 170
            N NYG AG+AIG D L +P+ VA D                 P  + H+V+        
Sbjct: 121 HNYNYGPAGRAIGVDLLANPDLVATDATVSFKTAMWFWMTAQPPKPSSHAVIVGQWSPSG 180
Query: 171 -------NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    GFG     ING +ECG  Q  +V  RIG+Y  YC+  GV  G NL C
Sbjct: 181 ADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 236

>pdb|2DKV|A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica Length = 309

Iteration: 1
 Score =  116 bits (291), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 120/236 (50%), Gaps = 48/236 (20%)
Query: 31  VANLVTPEFFDGIK-NVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFF 88
           V ++V  + F+ +  +  D + P + FYT +AFL AA ++P FG +G+T+  KRE+AAF 
Sbjct: 58  VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFL 117
Query: 89  AHVTHET-------------GHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
              +HET                C+ +E +  + YC  S  ++PC PG+ YYGRGPIQL+
Sbjct: 118 GQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPS-PEWPCAPGRKYYGRGPIQLS 176
Query: 136 GNGNYGAAGQAIGFDGLNSPETVAND--------------PMTN---VHSVVN------- 171
            N NYG AG+AIG D L++P+ VA D              P  N    H V+        
Sbjct: 177 FNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSP 236
Query: 172 --------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    G+G     +NG LECG    D+V  RIG+Y  YC  FG+  G NL C
Sbjct: 237 ADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC 292

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	219
2z37_A	244	Chitinase; family 19, conformational changes, hydr	1e-62
2cjl_A	204	Chitinase G, secreted chitinase; hydrolase, plant	2e-61
3cql_A	243	Endochitinase; glycosyl hydrolase, N-acetyl-D-gluc	5e-59
3hbe_X	204	Class IV chitinase CHIA4-PA2; endochitinase, famil	6e-59
1dxj_A	242	Class II chitinase; hydrolase, family 19 glycosida	1e-56
1wvv_A	265	Chitinase C; family 19 chitinase, whole structure,	1e-54
2dkv_A	309	Chitinase; whole structure, oryza sativa L. japoni	9e-44

>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A Length = 244

 Score =  194 bits (494), Expect = 1e-62
 Identities = 84/236 (35%), Positives = 122/236 (51%), Gaps = 47/236 (19%)

Query: 31  VANLVTPE-FFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFF 88
           ++ +++ + F+  +K++ D       F+T DAF+ AA S+P FG +G     K+EIAAFF
Sbjct: 2   LSGIISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFF 61

Query: 89  AHVTHETGH-------------LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
              +HET                CY EEIDKS+ +CD++N ++PC PGKFYYGRGP+ L+
Sbjct: 62  GQTSHETTGGWSGAPDGANTWGYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLS 121

Query: 136 GNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVV------------------------- 170
            N NYG  G+ +G + L +P+  ++DP+    + +                         
Sbjct: 122 WNYNYGPCGRDLGLELLKNPDVASSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEPSA 181

Query: 171 -------NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    G+G     ING LEC G+   KVQ RI +YT YC  FGV PG N+ C
Sbjct: 182 ADISAGRLPGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC 237

>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor} Length = 204

 Score =  189 bits (482), Expect = 2e-61
 Identities = 81/209 (38%), Positives = 104/209 (49%), Gaps = 29/209 (13%)

Query: 34  LVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVT 92
           +V+   FD +    +       FYT      A ++YP F + GS    K+E AAF A+V 
Sbjct: 2   VVSEAQFDQMFPSRNS------FYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVG 55

Query: 93  HETGHLCYVEEIDKSN--AYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFD 150
           HETG L YV E + +N   YCD S           YYGRGP+QL+ N NY AAG A+G D
Sbjct: 56  HETGGLVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGID 115

Query: 151 GLNSPETVANDPMTNVHSVV--------------------NQGFGATIQRINGALECGGK 190
            LN+P+ V ND      + +                      GFG TI+ ING+LEC G 
Sbjct: 116 LLNNPDLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAMVNGAGFGETIRSINGSLECDGG 175

Query: 191 QPDKVQARIGYYTDYCNKFGVSPGENLSC 219
            P +VQ+RI  Y  +    GV PG NLSC
Sbjct: 176 NPGQVQSRIDNYERFTQLLGVEPGGNLSC 204

>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A Length = 243

 Score =  185 bits (469), Expect = 5e-59
 Identities = 84/236 (35%), Positives = 117/236 (49%), Gaps = 48/236 (20%)

Query: 31  VANLVTPEFFDGI-KNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFF 88
           +  +++   FD + K+  +P+ P K FYT DAF+ AA S+P FG +GSTD  KREIAAF 
Sbjct: 2   IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFL 61

Query: 89  AHVTHETG-------------HLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
              +HET                C+++E + S+ YC   + +YPC PGK YYGRGPIQL+
Sbjct: 62  GQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAP-SPRYPCAPGKSYYGRGPIQLS 120

Query: 136 GNGNYGAAGQAIGFDGLNSPETVANDPMTNVHSVV------------------------- 170
            N NYG  G+A+  + L +P+ VA D + +  + +                         
Sbjct: 121 WNYNYGPCGEALRVNLLGNPDLVATDRVISFKTALWFWMTPQAPKPSCHDVITGRWQPSA 180

Query: 171 -------NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    G+G     ING LECG     +V  RIG++  YC   GV  G NL C
Sbjct: 181 ADTAAGRLPGYGVITNIINGGLECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDC 236

>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} PDB: 3hbd_A 3hbh_A Length = 204

 Score =  183 bits (465), Expect = 6e-59
 Identities = 95/205 (46%), Positives = 127/205 (61%), Gaps = 18/205 (8%)

Query: 31  VANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFA 89
           V  +++  FF+G+   A  S  GK FYT +AF+ AAN+Y  FG +GS D  KRE+AAFFA
Sbjct: 2   VGGIISQSFFNGLAGGAASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAFFA 61

Query: 90  HVTHETGHLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGF 149
           +V HETG LCY+ E +    YC +S+  +PC  GK Y+GRGP+QL+ N NYGAAG++IGF
Sbjct: 62  NVMHETGGLCYINEKNPPINYCQSSS-TWPCTSGKSYHGRGPLQLSWNYNYGAAGKSIGF 120

Query: 150 DGLNSPETVANDPMTNVHSVV---------------NQGFGATIQRINGALECGGKQPDK 194
           DGLN+PE V  D   +  + V                QGFG TI+ IN  +EC G    +
Sbjct: 121 DGLNNPEKVGQDSTISFKTAVWFWMKNSNCHSAITSGQGFGGTIKAINS-MECNGGNSGE 179

Query: 195 VQARIGYYTDYCNKFGVSPGENLSC 219
           V +R+ YY   C++ GV PG N+SC
Sbjct: 180 VSSRVNYYKKICSQLGVDPGANVSC 204

>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1 Length = 242

 Score =  179 bits (454), Expect = 1e-56
 Identities = 86/236 (36%), Positives = 114/236 (48%), Gaps = 50/236 (21%)

Query: 31  VANLVTPEFFDGI-KNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFF 88
           V +++    FD + K+  DP+  GK FY+ +AF+ AA S+  FG +G T+  KRE+AAF 
Sbjct: 2   VGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFL 61

Query: 89  AHVTHETGH-------------LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
           A  +HET                C+V E DKSN YCD      PC  GK YYGRGPIQLT
Sbjct: 62  AQTSHETTGGAAGSPDGPYAWGYCFVTERDKSNKYCDPG---TPCPAGKSYYGRGPIQLT 118

Query: 136 GNGNYGAAGQAIGFDGLNSPETVANDPMTNVHS--------------------------- 168
            N NY  AG+A+G D +N+P+ VA D + +  +                           
Sbjct: 119 HNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSA 178

Query: 169 -----VVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    GFG     ING +ECG         RIG+Y  YC+   +S G NL+C
Sbjct: 179 ADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC 234

>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A Length = 265

 Score =  174 bits (441), Expect = 1e-54
 Identities = 77/189 (40%), Positives = 105/189 (55%), Gaps = 23/189 (12%)

Query: 54  KSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSNA--Y 110
            +FYT     +A ++YP F  +GS +  KRE AAF A+V+H+TG L Y++E++++N   Y
Sbjct: 77  NAFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHQTGGLFYIKEVNEANYPHY 136

Query: 111 CDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDPMTNVHS-- 168
           CDT+ +         YYGRGPIQL+ N NY AAG A+G + L +P  V  DP     +  
Sbjct: 137 CDTTQSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLANPYLVEQDPAVAWKTGL 196

Query: 169 ------------------VVNQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFG 210
                             V N GFG TI+ INGALEC G  P +VQ+RI  +T +    G
Sbjct: 197 WYWNSQNGPGTMTPHNAIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFTQILG 256

Query: 211 VSPGENLSC 219
            + G NLSC
Sbjct: 257 TTTGPNLSC 265

>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A* Length = 309

 Score =  147 bits (372), Expect = 9e-44
 Identities = 78/229 (34%), Positives = 110/229 (48%), Gaps = 47/229 (20%)

Query: 37  PEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYP-EFGSGSTDDSKREIAAFFAHVTHET 95
             F   + +  D + P + FYT +AFL AA ++P   G+G+T+  KRE+AAF    +HET
Sbjct: 65  DLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHET 124

Query: 96  GH-------------LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGA 142
                           C+ +E +  + YC   + ++PC PG+ YYGRGPIQL+ N NYG 
Sbjct: 125 TGGWPTAPDGPFSWGYCFKQEQNPPSDYCQP-SPEWPCAPGRKYYGRGPIQLSFNFNYGP 183

Query: 143 AGQAIGFDGLNSPETVANDPMTNVHS--------------------------------VV 170
           AG+AIG D L++P+ VA D   +  +                                  
Sbjct: 184 AGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGR 243

Query: 171 NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
             G+G     +NG LECG    D+V  RIG+Y  YC  FG+  G NL C
Sbjct: 244 APGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC 292

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	219
3hbe_X	204	Class IV chitinase CHIA4-PA2; endochitinase, famil	100.0
3w3e_A	242	Cotyledoneous yieldin-like protein; alpha helical	100.0
3cql_A	243	Endochitinase; glycosyl hydrolase, N-acetyl-D-gluc	100.0
2z37_A	244	Chitinase; family 19, conformational changes, hydr	100.0
1dxj_A	242	Class II chitinase; hydrolase, family 19 glycosida	100.0
2dkv_A	309	Chitinase; whole structure, oryza sativa L. japoni	100.0
2cjl_A	204	Chitinase G, secreted chitinase; hydrolase, plant	100.0
1wvv_A	265	Chitinase C; family 19 chitinase, whole structure,	100.0

>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} SCOP: d.2.1.0 PDB: 3hbd_A 3hbh_A

Probab=100.00  E-value=4.1e-68  Score=451.91  Aligned_cols=188  Identities=52%  Similarity=1.003  Sum_probs=180.6

Q ss_pred             cccCCCCHHHHHhccccCCCCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCCceehhccCCCC
Q 043794           30 QVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSN  108 (219)
Q Consensus        30 ~v~~~iT~~~f~~i~p~~~~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~f~~~~E~~~~~  108 (219)
                      +|+++||+++|++|||+++.+||+++||||++|++|+++||.|++ |++.++++|+||||||++|||++|+++||+..++
T Consensus         1 ~v~~ivt~~~f~~~~~~~~~~c~~~~fYty~~fi~Aa~~fp~F~~~g~~~~~kreiAaFlAq~~hETgg~~~~~E~~~~~   80 (204)
T 3hbe_X            1 SVGGIISQSFFNGLAGGAASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAFFANVMHETGGLCYINEKNPPI   80 (204)
T ss_dssp             CHHHHSCHHHHHHHHHTSCTTCTTTTTSCHHHHHHHHHTSTTTTTSSSHHHHHHHHHHHHHHHHHHHTTTTCSBCSSCSS
T ss_pred             CHHHhCCHHHHHHHHcCCCCCCCCCCcccHHHHHHHHHhcchhcCCCCccccHHHHHHHHhhccccCCCcEEEEeccCCC
Confidence            478999999999999999888999999999999999999999998 9999999999999999999999999999998877


Q ss_pred             CCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C--cchhhhhc--cC
Q 043794          109 AYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M--TNVHSVVN--QG  173 (219)
Q Consensus       109 ~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~--~~~~~~ad--~g  173 (219)
                      .||+++| +|||+||++|||||+||||||+||+++++++|+|||+|||+|++|+           |  +++|++++  +|
T Consensus        81 ~Ycd~~~-~~pcgdG~~Y~GRG~IQLTg~~NY~~~g~~lg~Dll~nPdlva~dp~~a~~sA~wfW~t~~~~~~~~~~~~g  159 (204)
T 3hbe_X           81 NYCQSSS-TWPCTSGKSYHGRGPLQLSWNYNYGAAGKSIGFDGLNNPEKVGQDSTISFKTAVWFWMKNSNCHSAITSGQG  159 (204)
T ss_dssp             CCCCCCS-SSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCGGGGGTCHHHHHHHHHHHHHHSSSHHHHHTTTCH
T ss_pred             CccCCCC-CCCCCCCCcccCCCceecccHHHHHHHHHHhCCccccCHHHHhhCHHHHHHHHHhhhccCCCHHHHhccCCC
Confidence            9999886 8999999999999999999999999999999999999999999987           3  78999995  67


Q ss_pred             hhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          174 FGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       174 f~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                      |+.||++|| |+||+++++.++++|+++|+++|++|||+||+||+|
T Consensus       160 fg~tt~~IN-G~eC~~~~~~~~~dRi~~Y~r~~~~Lgv~~g~nl~c  204 (204)
T 3hbe_X          160 FGGTIKAIN-SMECNGGNSGEVSSRVNYYKKICSQLGVDPGANVSC  204 (204)
T ss_dssp             HHHHHHHHH-GGGTTTTCHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             HHHHHHHHh-ccccCCCCchhHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999 999999999999999999999999999999999999

>3w3e_A Cotyledoneous yieldin-like protein; alpha helical protein, hydrolase, family 19 glycosidase, REG protein of the cell WALL yield threshold; 1.50A {Vigna unguiculata} PDB: 1dxj_A

Probab=100.00  E-value=4e-65  Score=442.52  Aligned_cols=187  Identities=49%  Similarity=0.911  Sum_probs=176.4

Q ss_pred             cccCCCCHHHHHhccccCC-CCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccC-C----------
Q 043794           30 QVANLVTPEFFDGIKNVAD-PSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHET-G----------   96 (219)
Q Consensus        30 ~v~~~iT~~~f~~i~p~~~-~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hET-g----------   96 (219)
                      +|+++||+++|++|||+++ ..||+++||||++||.|+++||.|++ |++.+.+||+||||||++||| |          
T Consensus         2 ~v~~ivt~~~f~~~~~~rn~~~c~~~~fYty~~fi~Aa~~fp~F~~tg~~~~~krElAaFlA~~~hET~gg~~~a~~g~~   81 (242)
T 3w3e_A            2 EVGSVIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAAFLAQTSHETTGGAATSPDGPY   81 (242)
T ss_dssp             CGGGTSCHHHHHHHTTTTTSTTSSCTTCSCHHHHHHHHHTSTTTTCSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTCGG
T ss_pred             chHhhCCHHHHHHHhhccCCCCCCCCCcccHHHHHHHHHhhhhhcCCCCchhhHHHHHHHHhhcccccCCCcccCCCCcc
Confidence            6899999999999999964 57999999999999999999999999 998999999999999999999 4          


Q ss_pred             --CceehhccCCCCCCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C
Q 043794           97 --HLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M  163 (219)
Q Consensus        97 --~f~~~~E~~~~~~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~  163 (219)
                        +|+++||+.....||+   ..|||+||++|||||+||||||+||+++++++|+|||+|||+|++|+           |
T Consensus        82 ~wg~~~~~E~~~~~~YC~---~~~Pc~dG~~Y~GRG~IQLTg~~NY~~~g~~lg~Dll~nPdlva~dp~~a~~sA~wfW~  158 (242)
T 3w3e_A           82 AWGYCFVTERDKSNRYCD---GSGPCSAGKSYYGRGPIQLTHNYNYNAAGRALGVDLINNPDLVARDAVVSFKTALWFWM  158 (242)
T ss_dssp             GCTTCCSBCSCCSCCCCC---SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHH
T ss_pred             ceEEEEeecccCcccccc---cCCCCCCCCceecCCcccCCcHHHHHHHHHHhCCccccCHHHHhhCHHHHHHHHHhhhe
Confidence              5999999988778998   68999999999999999999999999999999999999999999886           2


Q ss_pred             ------cchhhhhc---------------cChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          164 ------TNVHSVVN---------------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       164 ------~~~~~~ad---------------~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                            +++|++|.               +||+.||++||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       159 t~~~~kps~h~vi~g~w~p~~aD~~agr~~gfg~tt~iINGGlECg~~~~~~~~dRi~~Y~r~~~~Lgv~~G~nl~C  235 (242)
T 3w3e_A          159 TPQGNKPSCHDVITNRWTPSAADKAANRVPGFGVITNIINGGLECGKGPTPASGDRIGFYKRYCDVFGVSYGPNLNC  235 (242)
T ss_dssp             CCBTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             eCCCCCCchhhhhhccCCCccchhhhcccCChhhheeeecCccccCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCc
Confidence                  47998862               679999999999999999999999999999999999999999999999

>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A

Probab=100.00  E-value=5.2e-64  Score=437.05  Aligned_cols=189  Identities=46%  Similarity=0.910  Sum_probs=176.4

Q ss_pred             cccCCCCHHHHHhccccCC-CCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCC-C---------
Q 043794           30 QVANLVTPEFFDGIKNVAD-PSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETG-H---------   97 (219)
Q Consensus        30 ~v~~~iT~~~f~~i~p~~~-~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg-~---------   97 (219)
                      +|+++||+++|++|||+++ ..||+++||||++||+|+++||+|++ |++.++++|+||||||++|||+ +         
T Consensus         1 ~v~~iit~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~a~~g~~   80 (243)
T 3cql_A            1 GIEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFLGQTSHETTGGWPSAPDGPY   80 (243)
T ss_dssp             CGGGTSCHHHHHHHTTTTTCTTSTTTTTSCHHHHHHHHHTSTTTTCSSCHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGG
T ss_pred             CHhhhcCHHHHHHHHhcccccCCCccCcccHHHHHHHHHhCchhccCCCcccCHHHHHHHHhhhheecCCCcccCCCCcc
Confidence            4789999999999999975 56999999999999999999999998 8877788999999999999997 4         


Q ss_pred             ---ceehhccCCCCCCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C
Q 043794           98 ---LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M  163 (219)
Q Consensus        98 ---f~~~~E~~~~~~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~  163 (219)
                         |++++|+.....||+.+ ..|||+||++|||||+||||||+||+++++++|+|||+|||||++|+           |
T Consensus        81 ~wg~~~~~E~~~~~~Yc~~~-~~~pc~dG~~Y~GRG~IQLT~n~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~  159 (243)
T 3cql_A           81 AWGYCFLKERNPSSNYCAPS-PRYPCAPGKSYYGRGPIQLSWNYNYGPCGEALRVNLLGNPDLVATDRVISFKTALWFWM  159 (243)
T ss_dssp             GCTTCCSBCSSCSSCCCCCC-SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCGGGGGTCHHHHHHHHHHHHH
T ss_pred             cccceEEeeecCCCCccCCC-CCccCCCCCeeecCCccccchhHHHHHHHHHhCCccccCHHHHhcChHHHHHhHhhhhh
Confidence               99999998877899876 57999999999999999999999999999999999999999999987           2


Q ss_pred             ------cchhhhhc---------------cChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          164 ------TNVHSVVN---------------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       164 ------~~~~~~ad---------------~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                            +++|+++.               +||+.||++||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       160 t~~~~kps~h~vi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~g~~~~~~dRi~~y~~~~~~Lgv~~g~nl~C  236 (243)
T 3cql_A          160 TPQAPKPSCHDVITGRWQPSAADTAAGRLPGYGVITNIINGGLECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDC  236 (243)
T ss_dssp             CCBTTBCCHHHHHHTCCCCCHHHHHHTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             cCCCCCCChhhhhhccCCcchhhhhcccCCChhhhheeeeCCccCCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCC
Confidence                  37888863               679999999999999999999999999999999999999999999999

>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A

Probab=100.00  E-value=8.6e-64  Score=436.04  Aligned_cols=190  Identities=45%  Similarity=0.919  Sum_probs=177.4

Q ss_pred             cccCCCCHHHHHhccccCC-CCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCC-----------
Q 043794           30 QVANLVTPEFFDGIKNVAD-PSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETG-----------   96 (219)
Q Consensus        30 ~v~~~iT~~~f~~i~p~~~-~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg-----------   96 (219)
                      +|+++||+++|++|||+++ ..||+++||||++|++|+++||+|++ |+..++++|+||||||++|||+           
T Consensus         1 ~v~~iit~~~f~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~HET~gg~~~a~~g~~   80 (244)
T 2z37_A            1 DLSGIISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETTGGWSGAPDGAN   80 (244)
T ss_dssp             CGGGTSCHHHHHHHTTTTTSTTSSSTTTSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTCGG
T ss_pred             ChhhhCCHHHHHHHHhccCccCCcccCcCcHHHHHHHHHHhhhhccCCCccccHHHHHHHHhhheeecCCccccCCCCcc
Confidence            4789999999999999965 57999999999999999999999998 8877788889999999999997           


Q ss_pred             --CceehhccCCCCCCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C
Q 043794           97 --HLCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M  163 (219)
Q Consensus        97 --~f~~~~E~~~~~~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~  163 (219)
                        +|++++|+.....||+..+..|+|+||++|||||+||||||+||+++++++|+|||+|||||++|+           |
T Consensus        81 ~wg~~~~~E~~~~~~Yc~~~~~~~pc~dG~~Y~GRG~IQLT~~~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~  160 (244)
T 2z37_A           81 TWGYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMMLSWNYNYGPCGRDLGLELLKNPDVASSDPVIAFKTAIWFWM  160 (244)
T ss_dssp             GCTTCCSBCSCCCCCCCCTTCSSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHH
T ss_pred             cccceEeeeecCCcCCcCcCcCCcccCCCCeeecCCccccchHHHHHHHHHHhCCccccCHHHHhcChHHHHhhhheeeE
Confidence              589999998877899987778999999999999999999999999999999999999999999886           2


Q ss_pred             ------cchhhhhc---------------cChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          164 ------TNVHSVVN---------------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       164 ------~~~~~~ad---------------~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                            +++|+++.               +||+.||++||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       161 t~~~~kps~h~vi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~~~~~~~~dRi~~y~~~~~~Lgv~~g~nl~c  237 (244)
T 2z37_A          161 TPQAPKPSCHDVITDQWEPSAADISAGRLPGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDC  237 (244)
T ss_dssp             CCBTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             ECCCCCCchhhhhhccCCcchhhhhcccCCChhhhheeeeCCccCCCCCcHHHHHHHHHHHHHHHHhCCCCCCCcCC
Confidence                  37888863               579999999999999999999999999999999999999999999999

>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1

Probab=100.00  E-value=1e-62  Score=428.78  Aligned_cols=187  Identities=47%  Similarity=0.884  Sum_probs=174.2

Q ss_pred             cccCCCCHHHHHhccccCC-CCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCC----------
Q 043794           30 QVANLVTPEFFDGIKNVAD-PSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGH----------   97 (219)
Q Consensus        30 ~v~~~iT~~~f~~i~p~~~-~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~----------   97 (219)
                      +|+++||+++|++|||+++ ..||+++||||++|++|+++||+|++ |++.++++|+||||||++|||++          
T Consensus         1 ~v~~~it~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~~~~~~y   80 (242)
T 1dxj_A            1 DVGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQTSHETTGGAAGSPDGPY   80 (242)
T ss_dssp             CGGGTSCHHHHHHHTTTTTCTTSSCSSCSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGG
T ss_pred             CHHHhcCHHHHHHHHhccCccCCCccCcccHHHHHHHHHhCchhccCCCcccCHHHHHHHHhhhheecCCCcccCCCCcc
Confidence            4789999999999999975 56999999999999999999999998 88888899999999999999974          


Q ss_pred             ---ceehhccCCCCCCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C
Q 043794           98 ---LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M  163 (219)
Q Consensus        98 ---f~~~~E~~~~~~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~  163 (219)
                         |++++|+.....||+...   +|+||++|||||+||||||+||+++++++|+|||+|||||++|+           |
T Consensus        81 ~wG~~~~~E~~~~~~Yc~~~~---pc~dG~~Y~GRG~IQLT~~~NY~~~g~~lg~dLl~nPdlva~dp~~a~~sA~WfW~  157 (242)
T 1dxj_A           81 AWGYCFVTERDKSNKYCDPGT---PCPAGKSYYGRGPIQLTHNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWM  157 (242)
T ss_dssp             GCTTCCSBCSCCCCCCCCTTS---CCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHH
T ss_pred             cccceeeeccCCCcccCcCCC---CCCCCCceecCCceecccHHHHHHHHHHhCCccccCHHHHhcChHHHHHhHHHHhh
Confidence               999999988778998653   89999999999999999999999999999999999999999987           2


Q ss_pred             ------cchhhhhc---------------cChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          164 ------TNVHSVVN---------------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       164 ------~~~~~~ad---------------~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                            +++|+++.               +||+.||++||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       158 t~~~~kps~hdvi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~eC~~g~~~~~~dRi~~y~~~~~~Lgv~~g~nl~C  234 (242)
T 1dxj_A          158 TPQGNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC  234 (242)
T ss_dssp             CCBTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             cCCCCCCChhhhhhccCCcchhhhhcccCCChhhhheeeeCCcccCCCCchHHHHHHHHHHHHHHHhCCCcCCCcCC
Confidence                  37888863               679999999999999999999999999999999999999999999999

>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A*

Probab=100.00  E-value=6.8e-61  Score=429.62  Aligned_cols=191  Identities=44%  Similarity=0.897  Sum_probs=177.6

Q ss_pred             hccccCCCCHHHHHhccccCC-CCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCC--------
Q 043794           28 VSQVANLVTPEFFDGIKNVAD-PSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGH--------   97 (219)
Q Consensus        28 ~~~v~~~iT~~~f~~i~p~~~-~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~--------   97 (219)
                      ..+|+++||+++|++|||+++ ..||+++||||++||+|+++||+|++ |++.++++|+||||||++|||++        
T Consensus        55 ~~~v~~iit~~~f~~~~~~rn~~~c~~~~fyty~~fi~Aa~~fp~F~~tG~~~~~krelAaFLAq~~HETggg~~~~~~~  134 (309)
T 2dkv_A           55 SDGVGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDG  134 (309)
T ss_dssp             -CCGGGTSCHHHHHHHTTTTTCTTCTTTTCSCHHHHHHHHHTCTTTTCSSSHHHHHHHHHHHHHHHHHHHCCCCTTCTTC
T ss_pred             CcchhhhccHHHHHHHhhcccccCCCcCCcccHHHHHHHHHhhhhhcccCCccccHHHHHHHHhhcchhcCCCcccCCCc
Confidence            358999999999999999975 46999999999999999999999998 88788899999999999999985        


Q ss_pred             -----ceehhccCCCCCCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC----------
Q 043794           98 -----LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP----------  162 (219)
Q Consensus        98 -----f~~~~E~~~~~~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~----------  162 (219)
                           |++++|+.....||+.. ..|+|+||++|||||+||||||+||+++++++|+|||+|||||++|+          
T Consensus       135 ~y~wG~~~~~E~~~~~~Yc~~~-~~~pcgdG~~Y~GRG~IQLT~~~NY~~~g~~lg~DLl~nPdlVa~dp~~A~~sA~WF  213 (309)
T 2dkv_A          135 PFSWGYCFKQEQNPPSDYCQPS-PEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWF  213 (309)
T ss_dssp             GGGCTTCCSBCSSCSCCCCCCC-SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHH
T ss_pred             cccccceeeeeecCCCCCcCCC-CCcccCCCCeeecCCcccccchhhHHHHHHHhCCccccCHHHHhcCHHHHHHhhhhh
Confidence                 89999998877899876 47999999999999999999999999999999999999999999986          


Q ss_pred             -C------cchhhhhc---------------cChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          163 -M------TNVHSVVN---------------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       163 -~------~~~~~~ad---------------~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                       |      +++|+++.               +||+.||++||||+||++++++++++|+++|++++++|||+||+||+|
T Consensus       214 W~t~~~~kps~hdvi~g~w~ps~aD~~a~~~~gfg~~t~iINGG~EC~~g~~~~~~dRi~~y~r~~~~Lgv~~g~nl~C  292 (309)
T 2dkv_A          214 WMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC  292 (309)
T ss_dssp             HHCCBTTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHTTCCCCSCCCC
T ss_pred             eeeCCCCCCChhhhhhcccCcchhhhhcccCCChhheeeEEeCCcccCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCC
Confidence             2      37888774               679999999999999999999999999999999999999999999999

>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor}

Probab=100.00  E-value=8.7e-59  Score=395.44  Aligned_cols=180  Identities=48%  Similarity=0.823  Sum_probs=166.1

Q ss_pred             CCCCHHHHHhccccCCCCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCCceehhccCCCC--C
Q 043794           33 NLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGHLCYVEEIDKSN--A  109 (219)
Q Consensus        33 ~~iT~~~f~~i~p~~~~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~f~~~~E~~~~~--~  109 (219)
                      ++||+++|++|||+++      +||||++|+.|+++||+|++ |+++++++|+||||||++||||+|++++|+...+  .
T Consensus         1 ~~it~~~f~~i~~~~~------~fyt~~~~~~A~~~y~~f~~~g~~~~~~~e~AaFlAq~~hETgg~~~~~E~~~~~y~~   74 (204)
T 2cjl_A            1 FVVSEAQFDQMFPSRN------SFYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETGGLVYVVEQNTANYPH   74 (204)
T ss_dssp             CCSCHHHHHHHCTTCC------TTSCHHHHHHHGGGCTTTTCSSCHHHHHHHHHHHHHHHHHHHTTTTCSBCSCGGGGGG
T ss_pred             CcCCHHHHHHHhccCC------ccccHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHhHHHHHcCCCcceeecCCCcCcc
Confidence            4799999999999864      48999999999999999998 8888899999999999999999999999997543  6


Q ss_pred             CccCCCCCCcCCCC-CccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------Cc-------chhhhh
Q 043794          110 YCDTSNTQYPCVPG-KFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------MT-------NVHSVV  170 (219)
Q Consensus       110 Y~~~~n~~y~~gDG-~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~~-------~~~~~a  170 (219)
                      ||+.+ .+|+|+|| ++|||||+||||||+||+++++++|+||++|||||++|+           |+       ++|+++
T Consensus        75 ~c~~~-~~y~~~~g~~~Y~GRG~iQLT~~~NY~~~g~~lg~dll~nPdlv~~dp~~a~~sA~wfW~t~~~~~~~s~~~~~  153 (204)
T 2cjl_A           75 YCDAS-QPYGCPAGNDKYYGRGPVQLSWNFNYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLWYWNTQTGPGTMTPHDAM  153 (204)
T ss_dssp             GCCTT-STTCCTTCTTCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHHCCTTSSSCHHHHH
T ss_pred             ccCCC-CCCCCCCCCccccCCChHHHhHHHHHHHHHHHhCcccccCHHHHhcCHHHHHHHHHHHhhcCCCCCCCcHHHHH
Confidence            88875 56899988 799999999999999999999999999999999999986           22       578877


Q ss_pred             --ccChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          171 --NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       171 --d~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                        .+||+.||++||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       154 ~~~~~f~~~t~~INGg~eC~~~~~~~~~~R~~~y~~~~~~lgv~~g~nl~c  204 (204)
T 2cjl_A          154 VNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC  204 (204)
T ss_dssp             HTTCCHHHHHHHTTCTTTTTTTCHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             hcCCChhhhhhheeCCccCCCCCcccHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence              5679999999999999999999999999999999999999999999999

>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A

Probab=100.00  E-value=1.3e-57  Score=401.79  Aligned_cols=184  Identities=45%  Similarity=0.811  Sum_probs=170.4

Q ss_pred             ccccCCCCHHHHHhccccCCCCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCCceehhccCCC
Q 043794           29 SQVANLVTPEFFDGIKNVADPSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGHLCYVEEIDKS  107 (219)
Q Consensus        29 ~~v~~~iT~~~f~~i~p~~~~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~f~~~~E~~~~  107 (219)
                      ++|+++||+++|++|||+++      +||||++|+.|+++||.|++ |+++++++|+||||||++||||+|++++|+...
T Consensus        58 ~~v~~~it~~~f~~i~~~~~------~fyty~~~~~A~~~f~~f~~~g~~~~~~~e~AaFlAq~~hETgg~~~~~E~~~~  131 (265)
T 1wvv_A           58 GNNGFVVSEAQFNQMFPNRN------AFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHQTGGLFYIKEVNEA  131 (265)
T ss_dssp             CCCCCSSCHHHHHHHCTTCC------TTCCHHHHHHHGGGSTTTTCSSSHHHHHHHHHHHHHHHHHHHTTTTCSBCSCGG
T ss_pred             CChhheecHHHHHHHhcccc------ccccHHHHHHHHHhcccccccCCcccCHHHHHHHHhHHhHhhccceeeEecCCC
Confidence            47999999999999999864      58999999999999999998 888999999999999999999999999999754


Q ss_pred             C--CCccCCCCCCcCCCC-CccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------Cc-------ch
Q 043794          108 N--AYCDTSNTQYPCVPG-KFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------MT-------NV  166 (219)
Q Consensus       108 ~--~Y~~~~n~~y~~gDG-~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~~-------~~  166 (219)
                      .  .||+.+ ..|+|+|| ++|||||+||||||+||+++++++|+||++|||||++|+           |+       ++
T Consensus       132 ~y~~~c~~~-~~~~c~~G~~~Y~GRG~IQLT~~~NY~~~g~~lg~dll~nPdlv~~dp~~a~~sA~wfW~t~~~~~~~s~  210 (265)
T 1wvv_A          132 NYPHYCDTT-QSYGCPAGQAAYYGRGPIQLSWNFNYKAAGDALGINLLANPYLVEQDPAVAWKTGLWYWNSQNGPGTMTP  210 (265)
T ss_dssp             GGGGGCCTT-STTCCTTCTTCCSCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHHCCTTSSSCH
T ss_pred             CCccccccC-CCCCCCCccccccCCCchhhhhHHHHHHHHHHhCcccccCHHHHhcchHHHHHHHHHHHhcCCCCCCCch
Confidence            3  688875 56899999 699999999999999999999999999999999999986           22       47


Q ss_pred             hhhh--ccChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          167 HSVV--NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       167 ~~~a--d~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                      |+++  .+||+.||++||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       211 ~~~~~~~~gfg~~t~~INGg~eC~~~~~~~~~dR~~~y~~~~~~lgv~~g~nl~c  265 (265)
T 1wvv_A          211 HNAIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFTQILGTTTGPNLSC  265 (265)
T ss_dssp             HHHHHTTCCHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             hhhhhcCCChhheeeeeeCCcccCCCCcccHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            8777  5679999999999999999999999999999999999999999999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	219
d1dxja_	242	d.2.1.1 (A:) Plant class II chitinase {Jack bean (	6e-69
d2baaa_	243	d.2.1.1 (A:) Plant class II chitinase {Barley (Hor	5e-68

>d1dxja_ d.2.1.1 (A:) Plant class II chitinase {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 242

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score =  209 bits (533), Expect = 6e-69
 Identities = 88/236 (37%), Positives = 116/236 (49%), Gaps = 50/236 (21%)

Query: 31  VANLVTPEFFDGI-KNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFF 88
           V +++    FD + K+  DP+  GK FY+ +AF+ AA S+  FG +G T+  KRE+AAF 
Sbjct: 2   VGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFL 61

Query: 89  AHVTHETGH-------------LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
           A  +HET                C+V E DKSN YCD      PC  GK YYGRGPIQLT
Sbjct: 62  AQTSHETTGGAAGSPDGPYAWGYCFVTERDKSNKYCDPG---TPCPAGKSYYGRGPIQLT 118

Query: 136 GNGNYGAAGQAIGFDGLNSPETVANDPM-----------------TNVHSVV-------- 170
            N NY  AG+A+G D +N+P+ VA D +                  + H V+        
Sbjct: 119 HNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSA 178

Query: 171 -------NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    GFG     ING +ECG         RIG+Y  YC+   +S G NL+C
Sbjct: 179 ADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC 234

>d2baaa_ d.2.1.1 (A:) Plant class II chitinase {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 243

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  207 bits (527), Expect = 5e-68
 Identities = 91/236 (38%), Positives = 119/236 (50%), Gaps = 48/236 (20%)

Query: 31  VANLVTPEFFDGI-KNVADPSSPGKSFYTRDAFLNAANSYPEFG-SGSTDDSKREIAAFF 88
           V+++V+   FD +  +  D +   K FYT DAF+ AA ++P FG +GS D  KRE+AAF 
Sbjct: 2   VSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFL 61

Query: 89  AHVTHETGH-------------LCYVEEIDKSNAYCDTSNTQYPCVPGKFYYGRGPIQLT 135
           A  +HET                C+ +E   S+ YC  S  Q+PC PGK YYGRGPIQL+
Sbjct: 62  AQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPS-AQWPCAPGKRYYGRGPIQLS 120

Query: 136 GNGNYGAAGQAIGFDGLNSPETVANDPM-----------------TNVHSVVN------- 171
            N NYG AG+AIG D L +P+ VA D                    + H+V+        
Sbjct: 121 HNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSG 180

Query: 172 --------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC 219
                    GFG     ING +ECG  Q  +V  RIG+Y  YC+  GV  G NL C
Sbjct: 181 ADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 236

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	219
d2baaa_	243	Plant class II chitinase {Barley (Hordeum vulgare)	100.0
d1dxja_	242	Plant class II chitinase {Jack bean (Canavalia ens	100.0

>d2baaa_ d.2.1.1 (A:) Plant class II chitinase {Barley (Hordeum vulgare) [TaxId: 4513]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=1.7e-61  Score=419.47  Aligned_cols=189  Identities=47%  Similarity=0.836  Sum_probs=172.4

Q ss_pred             cccCCCCHHHHHhccccCC-CCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCCceehhccC--
Q 043794           30 QVANLVTPEFFDGIKNVAD-PSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGHLCYVEEID--  105 (219)
Q Consensus        30 ~v~~~iT~~~f~~i~p~~~-~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~f~~~~E~~--  105 (219)
                      +|+++||+++|++|||+++ ..||+++||||++|++|+++||+|++ |++.++++|+|+||||++|||++|...+|..  
T Consensus         1 ~v~~iit~~~F~~~fp~r~~~~c~~~~fYty~~fi~Aa~~fp~F~~tg~~~~~krElAaFlAq~~hET~g~~~~~e~~~~   80 (243)
T d2baaa_           1 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAF   80 (243)
T ss_dssp             CGGGTSCHHHHHHHTTTTTSTTSTTTTTCCHHHHHHHHTTSTTTTCSSCHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGG
T ss_pred             CHHHhcCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHhchhhcCCCchhhhHHHHHHhhcCcccccCCCcccCCCCch
Confidence            5899999999999999965 56999999999999999999999998 9999999999999999999999877666643  


Q ss_pred             -----------CCCCCccCCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C
Q 043794          106 -----------KSNAYCDTSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M  163 (219)
Q Consensus       106 -----------~~~~Y~~~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~  163 (219)
                                 ....||+. +.+|||+||++|||||+||||||+||+++++++|+||++|||+|++++           |
T Consensus        81 ~~g~~~~~e~~~~~~yc~~-~~~~pc~~G~~Y~GRG~iQLT~~~NY~~~g~~~g~dl~~~Pdlva~d~~~a~~sA~wfW~  159 (243)
T d2baaa_          81 AWGYCFKQERGASSDYCTP-SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWM  159 (243)
T ss_dssp             GCTTCCSBCCSCCCCCCCC-CSSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHH
T ss_pred             hhcccchhccCCccccccC-CCCCCCCCCCcccCCCcccccchhhHHHHHHHhCCCccccccceeeccHHHHHHHHHHHh
Confidence                       33468875 478999999999999999999999999999999999999999999987           2


Q ss_pred             ------cchhhhh---------------ccChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          164 ------TNVHSVV---------------NQGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       164 ------~~~~~~a---------------d~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                            +++|+++               .+||+.||++||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       160 t~~~~~~s~~~vi~g~w~p~~~d~a~~~~~gfg~tt~iINGg~ec~~~~~~~~~dRi~~Y~~~~~~lgv~~g~nl~C  236 (243)
T d2baaa_         160 TAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC  236 (243)
T ss_dssp             CCCTTSCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             cCCCCCccHHHHHhccCCcccchhhhccCCCcceEEEEEECcccCCCCCchHHHHHHHHHHHHHHHhCCCCCCCcCC
Confidence                  4677765               2579999999999999999999999999999999999999999999999

>d1dxja_ d.2.1.1 (A:) Plant class II chitinase {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=100.00  E-value=4.3e-61  Score=416.83  Aligned_cols=190  Identities=42%  Similarity=0.760  Sum_probs=170.0

Q ss_pred             cccCCCCHHHHHhccccCC-CCCCCCCcccHHHHHHHHhcccccCC-CCCCCCHHHHHHhhhhccccCCCceehhccCCC
Q 043794           30 QVANLVTPEFFDGIKNVAD-PSSPGKSFYTRDAFLNAANSYPEFGS-GSTDDSKREIAAFFAHVTHETGHLCYVEEIDKS  107 (219)
Q Consensus        30 ~v~~~iT~~~f~~i~p~~~-~~~~~~~~yt~~~f~~a~n~~~~fg~-g~~i~t~~~~A~FLAq~~hETg~f~~~~E~~~~  107 (219)
                      .|+++||+++|++|||+++ ..||+++||||++|++|+++||+|++ |+.+++++|+||||||++|||++|.+.+|....
T Consensus         1 ~v~~iit~~~F~~~fp~r~~~~c~~~~fytY~~fi~Aa~~fp~F~~~g~~~~~krelAAFlAq~~hET~g~~~~~e~~~~   80 (242)
T d1dxja_           1 DVGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQTSHETTGGAAGSPDGPY   80 (242)
T ss_dssp             CGGGTSCHHHHHHHTTTTTCTTSSCSSCSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGG
T ss_pred             CHHHhcCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHhcchhccCCCchhhHHHHHHHHhcccccCCCCcccCCCCcc
Confidence            4889999999999999965 56999999999999999999999998 999999999999999999999999888886543


Q ss_pred             C-CCcc---------CCCCCCcCCCCCccccCcccccccchhHHHHHHHhCCCCCCCccccccCC-----------C---
Q 043794          108 N-AYCD---------TSNTQYPCVPGKFYYGRGPIQLTGNGNYGAAGQAIGFDGLNSPETVANDP-----------M---  163 (219)
Q Consensus       108 ~-~Y~~---------~~n~~y~~gDG~~YrGRG~iQLTg~~NY~~~g~~lg~Dll~nPdlva~~~-----------~---  163 (219)
                      + .||.         ..+..|+|+||++|||||+||||||+||+++++++++||++|||+|++++           |   
T Consensus        81 ~~g~~~~~~~~~~~~~~~~~~pc~~G~~Y~GRG~iQLTg~~NY~~~~~~lg~dl~~nP~lva~d~~~a~~sA~wfW~~~~  160 (242)
T d1dxja_          81 AWGYCFVTERDKSNKYCDPGTPCPAGKSYYGRGPIQLTHNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTPQ  160 (242)
T ss_dssp             GCTTCCSBCSCCCCCCCCTTSCCCTTCCCCCBTTTTBCSHHHHHHHHHHHTSCTTTCTTHHHHCHHHHHHHHHHHHHCCB
T ss_pred             ccCcceeeccccccccccCCCCCCCCCcccCCCccccchhHHHHHHHHHhCCCcccChHHhhcChHHHHHHHHHHHhcCC
Confidence            2 1221         11245799999999999999999999999999999999999999999987           1   


Q ss_pred             ---cchhhhhc---------------cChhhhhhhhcCccccCCCCchhHHHHHHHHHHHHHHcCCCCCCCCCC
Q 043794          164 ---TNVHSVVN---------------QGFGATIQRINGALECGGKQPDKVQARIGYYTDYCNKFGVSPGENLSC  219 (219)
Q Consensus       164 ---~~~~~~ad---------------~gf~~~t~~INGglEc~~~~~~g~~~R~~~y~~~~~~lgv~~g~~l~c  219 (219)
                         .++|+++.               +||+.||++||||+||++++++++++|+++|+++|++|||+||+||+|
T Consensus       161 ~~~~s~~~~i~~~w~p~~~d~~~~~~~gfg~tt~iINGG~ec~~~~~~~~~dRi~~Y~~~~~~Lgv~~g~nl~C  234 (242)
T d1dxja_         161 GNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNC  234 (242)
T ss_dssp             TTBCCHHHHHTTCCCCCHHHHHTTCCSSHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHHHHHHHTCCCCSCCCC
T ss_pred             CCCcchhhhhhcCCCCccchhhhcccCCcceeeeEEecccccCCCCcHHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence               35666652               579999999999999999999999999999999999999999999999