Citrus Sinensis ID: 043813

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Protein Sequence
MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHcccccHHHHHccccccccccHHHHHHHHHHHHccccccccccHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccHHHHccHHHHHHHcccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHccccccccccccccHHHcc
Coil and Loop (DISEMBL)
MASSVMLMKLVTGCILVLVCLMGsafvstkaqVTCRTvvndltpcvsyvsyggavptnccngtvctclKQAVSGISYTRYQLGlaaglpgkcglnipyqispstdcsrvq
Flexible Loop (DISEMBL)
MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGlnipyqispstdcsrvq
Low Complexity Region (SEG)
MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ
Disordered region (IsUnstruct)
****VMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQI**********
Disordered Region (DISOPRED)
************GCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSR**
Disordered Region (DISEMBL)
MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQIS*********
Disordered Region (DISPRO)
*****MLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDC****
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	110	2.2.26 [Sep-21-2011]
Q43019	123	Non-specific lipid-transf	N/A	no	0.981	0.878	0.496	2e-25
Q43129	120	Non-specific lipid-transf	N/A	no	0.936	0.858	0.433	1e-16
Q42762	116	Non-specific lipid-transf	N/A	no	0.9	0.853	0.425	4e-16
Q9LZV9	116	Non-specific lipid-transf	yes	no	0.872	0.827	0.401	4e-16
Q9LDB4	113	Non-specific lipid-transf	no	no	0.736	0.716	0.437	5e-16
P85894	91	Non-specific lipid-transf	N/A	no	0.690	0.835	0.462	2e-15
Q39950	116	Non-specific lipid-transf	N/A	no	0.690	0.655	0.462	2e-14
Q43017	117	Non-specific lipid-transf	N/A	no	0.809	0.760	0.421	3e-14
Q9M5X8	117	Non-specific lipid-transf	N/A	no	0.809	0.760	0.412	5e-14
Q9M5X7	115	Non-specific lipid-transf	N/A	no	0.909	0.869	0.416	8e-14

>sp|Q43019|NLTP3_PRUDU Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 81/125 (64%), Gaps = 17/125 (13%)

Query: 1   MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCC 60
           MASS  L+KLV  C++ ++C M        A V+C  VVN+LTPC++YV+ GGA+  +CC
Sbjct: 1   MASSGQLLKLV--CLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCC 58

Query: 61  NG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTD 105
            G               ++C CLKQAV+GI YT    GLAAGLPGKCG+NIPY+ISPSTD
Sbjct: 59  TGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTD 118

Query: 106 CSRVQ 110
           C  ++
Sbjct: 119 CKSIK 123

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
Prunus dulcis (taxid: 3755)

>sp|Q43129|NLTP2_GOSHI Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 71/127 (55%), Gaps = 24/127 (18%)

Query: 1   MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYV--SYGGAVPTN 58
           MASS   M L   C++VL  ++G+     +  VT   V N L PC++Y+  S  GAVP  
Sbjct: 1   MASS---MSLKLACVVVLCMVVGAPLA--QGAVTSGQVTNSLAPCINYLRGSGAGAVPPG 55

Query: 59  CCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPS 103
           CC G                 C C+K A +GI  T    GLA+GLPGKCG+NIPY+ISPS
Sbjct: 56  CCTGIKSLNSAAQTTPVRQAACRCIKSAAAGI--TGINFGLASGLPGKCGVNIPYKISPS 113

Query: 104 TDCSRVQ 110
           TDC+ V+
Sbjct: 114 TDCNSVK 120

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Gossypium hirsutum (taxid: 3635)

>sp|Q42762|NLTP1_GOSHI Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1

 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 21/120 (17%)

Query: 8   MKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYV--SYGGAVPTNCCNG--- 62
           M L   C++VL  ++G+     +  VT   V N L PC++Y+  S  GAVP  CC G   
Sbjct: 1   MSLKLACVVVLCMVVGAPLA--QGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKS 58

Query: 63  ------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                         C C+K A +GI  T    GLA+GLPGKCG+NIPY+ISPSTDC+ V+
Sbjct: 59  LNSAAQTTPVRQAACRCIKSAAAGI--TGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Gossypium hirsutum (taxid: 3635)

>sp|Q9LZV9|NLTPA_ARATH Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 16/112 (14%)

Query: 15  ILVLVCLMGSAFV-STKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT---------- 63
           +L L  L+ S F   ++A ++C  V  +L PCV YV  GGA+P +CCNG           
Sbjct: 5   VLPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSA 64

Query: 64  -----VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                VC C+K  V  +SY+   L  AA LPGKCG+ +PY+I PST+C+ ++
Sbjct: 65  SDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDB4|NLTP6_ARATH Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 15/96 (15%)

Query: 30  KAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT---------------VCTCLKQAVSG 74
           +A V+C TV+ DL PC+SYV+ GG VPT CCNG                VC C+K A+ G
Sbjct: 18  EAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGG 77

Query: 75  ISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
           ++ +   +  A  LP KCG+++PY+ SPSTDC  +Q
Sbjct: 78  LTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Arabidopsis thaliana (taxid: 3702)

>sp|P85894|LTP1_MORNI Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 17/93 (18%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           +TC  V + L PC++Y+  GG VP NCCNG                 C CLK A + I  
Sbjct: 1   ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKG 60

Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
               L LAAGLPGKCG+++PY+ISPSTDC  V+
Sbjct: 61  --LNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Morus nigra (taxid: 85232)

>sp|Q39950|NLTP_HELAN Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 17/93 (18%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           ++C  V + L PC+SY++ GGAVP  CC+G                 C CLK A + IS 
Sbjct: 26  LSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSIS- 84

Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                G AA  PGKCG++IPY+ISPSTDCS+VQ
Sbjct: 85  -GVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Helianthus annuus (taxid: 4232)

>sp|Q43017|NLTP1_PRUDU Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 64/114 (56%), Gaps = 25/114 (21%)

Query: 15  ILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG------------ 62
           ++V +C++ S  V     +TC  V ++L PC+ YV  GGAVP  CCNG            
Sbjct: 11  LVVALCMVVS--VPIAQAITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTP 68

Query: 63  ---TVCTCLKQ---AVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                C CLKQ   +V G++        AA LPGKCG+NIPYQISPST+C+ V+
Sbjct: 69  DRQAACNCLKQLSASVPGVNPNN-----AAALPGKCGVNIPYQISPSTNCANVK 117

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Prunus dulcis (taxid: 3755)

>sp|Q9M5X8|NLTP_PRUAV Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1

 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 25/114 (21%)

Query: 15  ILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG------------ 62
           ++V +C++ S  V     +TC  V ++L PC++YV  GGAVP  CCNG            
Sbjct: 11  LVVALCMVVS--VPIAQALTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTA 68

Query: 63  ---TVCTCLKQ---AVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
              T C CLKQ   +V G++        AA LPGKCG+N+PY+ISPST+C+ V+
Sbjct: 69  DRQTACNCLKQLSASVPGVNANN-----AAALPGKCGVNVPYKISPSTNCATVK 117

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Prunus avium (taxid: 42229)

>sp|Q9M5X7|NLTP_MALDO Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1

 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 60/120 (50%), Gaps = 20/120 (16%)

Query: 6   MLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG--- 62
           M    VT   LV+   M    VS    +TC  V + L PC+ YV  GGAVP  CCNG   
Sbjct: 1   MASSAVTKLALVVALCMA---VSVAHAITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRT 57

Query: 63  ------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                       T C CLK     IS        AAGLPGKCG+N+PY+IS ST+C+ V+
Sbjct: 58  INGLARTTADRQTACNCLKNLAGSISGVNPN--NAAGLPGKCGVNVPYKISTSTNCATVK 115

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.

Malus domestica (taxid: 3750)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
2497753	123	RecName: Full=Non-specific lipid-transfe	0.981	0.878	0.496	8e-24
223667948	123	lipid transfer protein 3 precursor [Prun	0.981	0.878	0.496	1e-23
66957890	123	lipid transfer protein 2 precursor [Prun	0.981	0.878	0.488	3e-23
224140595	120	predicted protein [Populus trichocarpa]	0.872	0.8	0.459	2e-19
356506632	130	PREDICTED: non-specific lipid-transfer p	0.736	0.623	0.525	4e-19
351721452	122	uncharacterized protein LOC100499726 pre	0.854	0.770	0.491	5e-19
255648304	130	unknown [Glycine max]	0.736	0.623	0.515	8e-19
224139356	120	predicted protein [Populus trichocarpa]	0.872	0.8	0.450	1e-18
227955639	119	lipid transfer protein [Chimonanthus pra	0.845	0.781	0.464	8e-18
351727192	125	uncharacterized protein LOC100305883 pre	0.863	0.76	0.491	2e-17

>gi|2497753|sp|Q43019.1|NLTP3_PRUDU RecName: Full=Non-specific lipid-transfer protein 3; Short=LTP 3; Flags: Precursor gi|1321915|emb|CAA65477.1| lipid transfer protein [Prunus dulcis] gi|190613925|gb|ACE80966.1| putative allergen Pru du 3.02 [Prunus dulcis x Prunus persica] gi|190613927|gb|ACE80967.1| putative allergen Pru p 3.02 [Prunus dulcis x Prunus persica]

 Score =  114 bits (285), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 81/125 (64%), Gaps = 17/125 (13%)

Query: 1   MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCC 60
           MASS  L+KLV  C++ ++C M        A V+C  VVN+LTPC++YV+ GGA+  +CC
Sbjct: 1   MASSGQLLKLV--CLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCC 58

Query: 61  NG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTD 105
            G               ++C CLKQAV+GI YT    GLAAGLPGKCG+NIPY+ISPSTD
Sbjct: 59  TGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTD 118

Query: 106 CSRVQ 110
           C  ++
Sbjct: 119 CKSIK 123

Source: Prunus dulcis

Species: Prunus dulcis

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223667948|gb|ACN11576.1| lipid transfer protein 3 precursor [Prunus dulcis]

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 81/125 (64%), Gaps = 17/125 (13%)

Query: 1   MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCC 60
           MASS  L+KLV  C++ ++C M        A V+C  VVN+LTPC++YV+ GGA+  +CC
Sbjct: 1   MASSGQLLKLV--CLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCC 58

Query: 61  NG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTD 105
            G               ++C CLKQAV+GI YT    GLAAGLPGKCG+NIPY+ISPSTD
Sbjct: 59  TGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTD 118

Query: 106 CSRVQ 110
           C  ++
Sbjct: 119 CKTIK 123

Source: Prunus dulcis

Species: Prunus dulcis

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|66957890|gb|AAM22767.2| lipid transfer protein 2 precursor [Prunus persica]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/125 (48%), Positives = 80/125 (64%), Gaps = 17/125 (13%)

Query: 1   MASSVMLMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCC 60
           MASS  L+KLV  C++ ++C M        A V+C  VVN+LTPC++YV+ GGA+  +CC
Sbjct: 1   MASSGQLLKLV--CLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCC 58

Query: 61  NG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTD 105
            G               ++C CLKQAV+GI Y     GLAAGLPGKCG+NIPY+ISPSTD
Sbjct: 59  TGVRSLYSLAQTTADRQSICNCLKQAVNGIPYPNANAGLAAGLPGKCGVNIPYKISPSTD 118

Query: 106 CSRVQ 110
           C  ++
Sbjct: 119 CKSIK 123

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140595|ref|XP_002323667.1| predicted protein [Populus trichocarpa] gi|118487809|gb|ABK95728.1| unknown [Populus trichocarpa] gi|222868297|gb|EEF05428.1| predicted protein [Populus trichocarpa]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 15/111 (13%)

Query: 15  ILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG------------ 62
           + ++VC+M     +TKA ++C  V+N LTPC+SYV   GA+  NCCNG            
Sbjct: 10  VCLVVCIMVMTASTTKAAISCNQVINTLTPCISYVVGNGALTDNCCNGIRGLNSAARTTP 69

Query: 63  ---TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
              +VCTCLK   S  SY    + LAAGLPGKCG+ +PY+I PSTDC  V+
Sbjct: 70  DRQSVCTCLKNTASQFSYNSRNVALAAGLPGKCGVKLPYKIDPSTDCKSVK 120

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506632|ref|XP_003522081.1| PREDICTED: non-specific lipid-transfer protein 3-like [Glycine max]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 52/99 (52%), Positives = 64/99 (64%), Gaps = 18/99 (18%)

Query: 30  KAQVTCRTVVNDLTPCVSYVSYGGA-VPTNCCNG---------------TVCTCLKQAV- 72
           + +V+C  VV++LTPC+SYV YGGA VP  CCNG                VC C+K AV 
Sbjct: 32  QGEVSCGQVVSNLTPCISYVLYGGATVPAQCCNGIRNLYGMAQTKPDRQAVCNCIKNAVR 91

Query: 73  -SGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
            SG +Y+ + L LAA LP  CG+NIPYQISP TDC+RVQ
Sbjct: 92  NSGFTYSHFNLNLAANLPKNCGVNIPYQISPDTDCTRVQ 130

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721452|ref|NP_001235162.1| uncharacterized protein LOC100499726 precursor [Glycine max] gi|255626079|gb|ACU13384.1| unknown [Glycine max]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 20/114 (17%)

Query: 15  ILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGA-VPTNCCNG----------- 62
           I+ LVCL        + ++TC  VV++LTPC+SYV YGG  VP  CCNG           
Sbjct: 11  IMSLVCLALGPMA--QGEMTCGQVVSNLTPCISYVVYGGTNVPEQCCNGIRNLYGMAQTK 68

Query: 63  ----TVCTCLKQAV--SGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                VC C+K  V  SG +Y+ + L LAA LP KCG+NIPYQISP+TDC+RVQ
Sbjct: 69  PDRQAVCNCIKNGVRNSGFNYSDFNLNLAANLPKKCGVNIPYQISPNTDCTRVQ 122

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255648304|gb|ACU24604.1| unknown [Glycine max]

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 18/99 (18%)

Query: 30  KAQVTCRTVVNDLTPCVSYVSYGGA-VPTNCCNG---------------TVCTCLKQAV- 72
           + +V+C  VV++LTPC+SYV YGGA VP  CCNG                VC C+K AV 
Sbjct: 32  QGEVSCGQVVSNLTPCISYVLYGGATVPAQCCNGIRNLYGMAQTKPDRQAVCNCIKNAVR 91

Query: 73  -SGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
            SG +Y+ +   LAA LP  CG+NIPYQISP TDC+RVQ
Sbjct: 92  NSGFTYSHFNFNLAANLPKNCGVNIPYQISPDTDCTRVQ 130

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139356|ref|XP_002323072.1| predicted protein [Populus trichocarpa] gi|222867702|gb|EEF04833.1| predicted protein [Populus trichocarpa]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 15/111 (13%)

Query: 15  ILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG------------ 62
           + ++VC+M     +TKA ++C  V+N LTPC+SYV   GA+  NCCN             
Sbjct: 10  VCLVVCIMVMTASTTKAAISCNQVINTLTPCISYVVGNGALTGNCCNAIRGLNSAARTTP 69

Query: 63  ---TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
              +VCTCLK   S  SY    + LAAGLPGKCG+ +PY+I PSTDC  V+
Sbjct: 70  DRQSVCTCLKNTASQFSYNSRNVALAAGLPGKCGVKLPYKIDPSTDCKSVK 120

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|227955639|gb|ACP43542.1| lipid transfer protein [Chimonanthus praecox]

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 21/114 (18%)

Query: 16  LVLVCLMGSAFV----STKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG--------- 62
           +V+VCLM S+ +      +A  +C TVV+ LTPC++Y+  GG+VPT CC+G         
Sbjct: 8   IVVVCLMFSSILLSSLQAEAAFSCGTVVSSLTPCLTYLKSGGSVPTTCCSGVKSLNAAAK 67

Query: 63  ------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                 T C C+K A +GI  T  +L LA  LP KCG+NIPY+ISPSTDCS+V 
Sbjct: 68  TTPDRQTACNCMKNAAAGI--TGLKLELAGSLPTKCGVNIPYKISPSTDCSKVN 119

Source: Chimonanthus praecox

Species: Chimonanthus praecox

Genus: Chimonanthus

Family: Calycanthaceae

Order: Laurales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727192|ref|NP_001238176.1| uncharacterized protein LOC100305883 precursor [Glycine max] gi|255626879|gb|ACU13784.1| unknown [Glycine max]

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 19/114 (16%)

Query: 16  LVLVCL-MGSAFVSTKAQ--VTCRTVVNDLTPCVSYVSYGGA-VPTNCCNG--------- 62
           + +VCL +G   ++ KAQ  VTC  VV++LTPC+SYV  GG  VP  CCNG         
Sbjct: 12  MAIVCLVLGVISITPKAQAAVTCNQVVSNLTPCISYVLNGGKTVPGPCCNGIKTLFNLAH 71

Query: 63  ------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                 TVC C+K AVS   Y +  +  AA LP +CG+NIP QISPSTDC+RVQ
Sbjct: 72  STPDRQTVCKCIKNAVSAFHYGKSNVDRAAALPKQCGVNIPCQISPSTDCTRVQ 125

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
TAIR|locus:2181022	116	AT5G01870 [Arabidopsis thalian	0.872	0.827	0.401	9.5e-18
TAIR|locus:2168459	112	LTP4 "lipid transfer protein 4	0.781	0.767	0.388	4.2e-15
TAIR|locus:2168474	115	LTP3 "lipid transfer protein 3	0.827	0.791	0.366	6.9e-15
TAIR|locus:2064212	118	LP1 "lipid transfer protein 1"	0.909	0.847	0.336	1e-13
TAIR|locus:2081855	118	LTP5 "lipid transfer protein 5	0.909	0.847	0.327	3.9e-12
TAIR|locus:2064107	118	LTP2 "lipid transfer protein 2	0.909	0.847	0.327	5e-12
TAIR|locus:2081840	119	LTP12 "lipid transfer protein	0.863	0.798	0.344	2.8e-11
UNIPROTKB|P83434	91	P83434 "Non-specific lipid-tra	0.681	0.824	0.369	3.5e-11
UNIPROTKB|Q84N29	122	LTP3 "Probable non-specific li	0.9	0.811	0.290	4.1e-10
TAIR|locus:2062116	116	AT2G18370 [Arabidopsis thalian	0.863	0.818	0.290	2.2e-09

TAIR|locus:2181022 AT5G01870 [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 45/112 (40%), Positives = 64/112 (57%)

Query:    15 ILVLVCLMGSAFV-STKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT---------- 63
             +L L  L+ S F   ++A ++C  V  +L PCV YV  GGA+P +CCNG           
Sbjct:     5 VLPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSA 64

Query:    64 -----VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                  VC C+K  V  +SY+   L  AA LPGKCG+ +PY+I PST+C+ ++
Sbjct:    65 SDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2168459 LTP4 "lipid transfer protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 42/108 (38%), Positives = 61/108 (56%)

Query:    20 CLMGSAFV--STKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT-------------- 63
             C + + F+  S  A +TC TV + L+PC+ Y+S GG VP  CC G               
Sbjct:    10 CFVLTVFIVASVDAAITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQ 69

Query:    64 -VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
               C CL+ A  G++ +     LA+GLPGKCG++IPY IS ST+C+ ++
Sbjct:    70 QACRCLQSAAKGVNPS-----LASGLPGKCGVSIPYPISTSTNCATIK 112

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;TAS

GO:0008289 "lipid binding" evidence=IEA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0009414 "response to water deprivation" evidence=IEP;RCA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009409 "response to cold" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2168474 LTP3 "lipid transfer protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 41/112 (36%), Positives = 60/112 (53%)

Query:    14 CILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT---------- 63
             C+++ VC++ S      A ++C TV   L PC +Y+S GG VP +CC G           
Sbjct:    10 CLVLTVCIVASV----DAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTT 65

Query:    64 -----VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                   C C++     IS       LA+GLPGKCG++IPY IS ST+C+ ++
Sbjct:    66 PDRQQACRCIQSTAKSIS--GLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0005618 "cell wall" evidence=TAS

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IEP;RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2064212 LP1 "lipid transfer protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 40/119 (33%), Positives = 65/119 (54%)

Query:     7 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT--- 63
             +MKL   C+L L C++ +  +++ A ++C +V ++L  C+ YV  GG +P  CC+G    
Sbjct:     4 VMKLA--CLL-LACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNL 60

Query:    64 ------------VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                          C C++ A   +  +    G AAG+P  CG+NIPY+IS ST+C  V+
Sbjct:    61 NSIAKTTPDRQQACNCIQGAARALG-SGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;TAS

GO:0008289 "lipid binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

TAIR|locus:2081855 LTP5 "lipid transfer protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 39/119 (32%), Positives = 63/119 (52%)

Query:     7 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT--- 63
             L+KL T   LV+VC++ +A ++++A ++C  V   L  C +Y++ GG +P  CC+G    
Sbjct:     4 LLKLST---LVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRL 60

Query:    64 ------------VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                          C C++ A   +  +R   G AA LPG C + I Y IS  T+C+ V+
Sbjct:    61 NSLARTTRDRQQACRCIQGAARALG-SRLNAGRAARLPGACRVRISYPISARTNCNTVR 118

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA

GO:0005319 "lipid transporter activity" evidence=ISS

GO:0005618 "cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

TAIR|locus:2064107 LTP2 "lipid transfer protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 39/119 (32%), Positives = 61/119 (51%)

Query:     7 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGTV-- 64
             +MKL   C +VL C++ +  ++  A ++C TV  +L  C++Y++ G  +   CCNG    
Sbjct:     4 VMKLA--C-MVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNL 60

Query:    65 -------------CTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                          C CL+ A   +         AAGLP  C +NIPY+IS ST+C+ V+
Sbjct:    61 KNMASTTPDRQQACRCLQSAAKAVG-PGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0006649 "phospholipid transfer to membrane" evidence=NAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0012501 "programmed cell death" evidence=IGI

GO:0009414 "response to water deprivation" evidence=IEP

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2081840 LTP12 "lipid transfer protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 40/116 (34%), Positives = 58/116 (50%)

Query:     9 KLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT----- 63
             K++T C++VL   M S    T++ + C TV + L  C++Y++  G +P+ CC G      
Sbjct:     6 KIIT-CLIVLTIYMASP---TESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQ 61

Query:    64 ----------VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                       VC CLK A  G         L A LP  CG++IPY IS ST+C  +
Sbjct:    62 LAQTTPDRKQVCECLKLA--GKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0009505 "plant-type cell wall" evidence=ISS

GO:0010584 "pollen exine formation" evidence=RCA

UNIPROTKB|P83434 P83434 "Non-specific lipid-transfer protein 1" [Vigna radiata var. radiata (taxid:3916)]

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 34/92 (36%), Positives = 47/92 (51%)

Query:    33 VTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT---------------VCTCLKQAVSGISY 77
             +TC  V  +L  C+ ++  GG VP +CC G                VC+CLK A   +  
Sbjct:     1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR- 59

Query:    78 TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                    A  LPGKCG+NIPY+IS ST+C+ +
Sbjct:    60 -GINPNNAEALPGKCGVNIPYKISTSTNCNSI 90

GO:0005215 "transporter activity" evidence=IDA

GO:0005575 "cellular_component" evidence=ND

GO:0006869 "lipid transport" evidence=IDA

GO:0008289 "lipid binding" evidence=IDA

GO:0050830 "defense response to Gram-positive bacterium" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IDA

UNIPROTKB|Q84N29 LTP3 "Probable non-specific lipid-transfer protein 3" [Triticum aestivum (taxid:4565)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 34/117 (29%), Positives = 57/117 (48%)

Query:     9 KLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLTPCVSYVS-YGGAVPTNCCNGT---- 63
             K V   +++   ++  A     A ++C  V + L PCV+YV+    ++   CC+G     
Sbjct:     7 KAVAAAVVLAAVVLMMAGREASAALSCGQVDSKLAPCVAYVTGRASSISKECCSGVQGLN 66

Query:    64 -----------VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                         C CLK   + I      +G  +G+PGKCG+++P+ IS ST+C+ V
Sbjct:    67 GLARSSPDRKIACRCLKSLATSIK--SINMGKVSGVPGKCGVSVPFPISMSTNCNNV 121

GO:0009611 "response to wounding" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=IDA

GO:0009751 "response to salicylic acid stimulus" evidence=IDA

GO:0042542 "response to hydrogen peroxide" evidence=IDA

TAIR|locus:2062116 AT2G18370 [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 34/117 (29%), Positives = 57/117 (48%)

Query:    11 VTGCILVLVCLMGSAFVS--TKAQVTCRTVVNDLTPCVSYVSYG-GAVPTNCCNGT---- 63
             V  C L ++ ++G  F+   +++ ++C  V+ DL PCVSY++ G G  P  CC+G     
Sbjct:     3 VLKC-LAIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLA 61

Query:    64 -----------VCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                         C C+K   + ++    +  LA  L   CG ++P   SP+ DC+ V
Sbjct:    62 AATTTSADKKAACQCIKSVANSVTV---KPELAQALASNCGASLPVDASPTVDCTTV 115

GO:0005576 "extracellular region" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LZV9	NLTPA_ARATH	No assigned EC number	0.4017	0.8727	0.8275	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0076005701 RecName- Full=Non-specific lipid-transfer protein;; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) (120 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	110
cd01960	89	cd01960, nsLTP1, nsLTP1: Non-specific lipid-transf	3e-20
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	6e-07

>gnl|CDD|238926 cd01960, nsLTP1, nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 77.8 bits (192), Expect = 3e-20
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 18/91 (19%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPT-NCCNG---------------TVCTCLKQAVSGIS 76
           ++C  V + L PC+ Y++ GG  P+  CC+G                 C CLK A +GIS
Sbjct: 1   ISCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGIS 60

Query: 77  YTRYQLGLAAGLPGKCGLNIPYQISPSTDCS 107
                 G AAGLPGKCG++IPY ISPSTDCS
Sbjct: 61  --GLNPGRAAGLPGKCGVSIPYPISPSTDCS 89

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans. Length = 89

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 43.3 bits (102), Expect = 6e-07
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 35  CRTVVNDLTPCVSYVSYGGAVPTN-CCNG-----TVCTCLKQAVSGISYTRYQLGLAAGL 88
           C  V+  L PC  Y+  G  VP+  CC+        C C       +         AA L
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQVPSQQCCSQLRQLQAQCRCTAIRAIVLGIEGINPQAAASL 60

Query: 89  PGKCGLNIPYQI 100
           P  CG+N+PY I
Sbjct: 61  PSMCGVNVPYGI 72

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	110
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.82
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.38
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.12
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.1
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.09
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	98.59
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.49
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	88.54
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	80.16

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.82  E-value=3.8e-21  Score=125.70  Aligned_cols=73  Identities=56%  Similarity=1.151  Sum_probs=65.0

Q ss_pred             cCccccccCcccChHhhhcCC-CCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCC
Q 043813           33 VTCRTVVNDLTPCVSYVSYGG-AVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNI   96 (110)
Q Consensus        33 ~~C~~v~~~L~pC~~yl~~~~-~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~   96 (110)
                      .+|.++...|.||++|+++++ +|+++||++               ..|+|+++....++  +||++|+++||++||+++
T Consensus         1 ~~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~~~~~--~i~~~~a~~LP~~C~v~~   78 (89)
T cd01960           1 ISCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGIS--GLNPGRAAGLPGKCGVSI   78 (89)
T ss_pred             CCHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccccccC--CCCHHHHHhChHhcccCC
Confidence            368999999999999999877 899999999               25777888776675  599999999999999999


Q ss_pred             CCCCCCCCCCC
Q 043813           97 PYQISPSTDCS  107 (110)
Q Consensus        97 p~~is~~~dC~  107 (110)
                      ||+|++++||+
T Consensus        79 ~~~i~~~~dC~   89 (89)
T cd01960          79 PYPISPSTDCS   89 (89)
T ss_pred             CCCCCCCCCCC
Confidence            99999999996

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.38  E-value=7.1e-14  Score=88.52  Aligned_cols=61  Identities=28%  Similarity=0.574  Sum_probs=50.0

Q ss_pred             ccccccCcccChHhhhcCC---CCCcCCCCC-----CccccccccccCCcccccChHHHhcccCcCCCCCC
Q 043813           35 CRTVVNDLTPCVSYVSYGG---AVPTNCCNG-----TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        35 C~~v~~~L~pC~~yl~~~~---~Ps~~CC~~-----~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      |+.....|+||++|+++++   +|++.||++     ..|+|.+.....++  .||.++|++||++||+++|
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~~~~C~C~~~~~~~~~--~i~~~~a~~Lp~~Cgv~~p   69 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRADLPCLCRYKTSLVLQ--IIDPDKAVYLPAKCGLPLP   69 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcCCcCCEeeccCCCccc--ccCHHHHHHHHHHcCCCCC
Confidence            4544477899999999865   588899999     56999766555555  6999999999999999877

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.12  E-value=1.2e-11  Score=77.42  Aligned_cols=55  Identities=24%  Similarity=0.565  Sum_probs=45.6

Q ss_pred             cCcccChHhhhcCCCCCcCCCCC----Ccccc-c-cccccCCcccccChHHHhcccCcCCCCCC
Q 043813           40 NDLTPCVSYVSYGGAVPTNCCNG----TVCTC-L-KQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        40 ~~L~pC~~yl~~~~~Ps~~CC~~----~~ClC-l-k~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      ..|.+|++|++++.+||++||+.    ..|+| + ++..  +.. .||.++|++||++||+++|
T Consensus         4 ~~L~~C~~ai~~~~~Ps~~CC~~Lk~~~~CLC~y~~~p~--l~~-~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           4 TQLSPCLPAILGGSPPSAACCAKLKEQQSCLCQYAKNPS--LKQ-YVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhcccCHHHHhCCCCCCHHHHHHHhcCCCCeeeeecCcc--HHh-hcCcHHHHHHHHHcCCCCC
Confidence            47999999999878999999999    78999 3 3432  321 5899999999999999876

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.10  E-value=4.5e-12  Score=82.51  Aligned_cols=62  Identities=32%  Similarity=0.764  Sum_probs=40.9

Q ss_pred             cccCccccccCcccC---hHhhhcCCCCCcCCCCC--------Ccccc--ccccc-cCCcccccChHHHhcccCcCCCCC
Q 043813           31 AQVTCRTVVNDLTPC---VSYVSYGGAVPTNCCNG--------TVCTC--LKQAV-SGISYTRYQLGLAAGLPGKCGLNI   96 (110)
Q Consensus        31 a~~~C~~v~~~L~pC---~~yl~~~~~Ps~~CC~~--------~~ClC--lk~~~-~~~~~~~in~~~a~~LP~~Cgv~~   96 (110)
                      ...+|.+   .|.||   +.|+.++..|+++||++        ..|+|  +++.. ..+   +||.+|+.+||++||++.
T Consensus        18 ~~~~c~~---~l~~c~~~~~~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~---~in~~~a~~Lp~~Cg~~~   91 (96)
T PF14368_consen   18 CCCSCAN---SLLPCCPCLCYVTGGPAPSAACCSALKSVVQADPPCLCQLLNSPGAPGF---GINVTRALALPAACGVPV   91 (96)
T ss_dssp             BTTB-HC---CCCHH--HHHHHCC-----HHHHHHHCC----HCCHHHCCCC-CCHCHH---CCTCHHHHHHHHHCTSS-
T ss_pred             CcchhHH---HHhccccchhccCCCCCCCHHHHHHHHHhccCCCCCHHHhcCccccccC---CcCHHHHHHHHHHcCCCC
Confidence            3455643   57777   78888666999999999        67999  44443 223   799999999999999998


Q ss_pred             CC
Q 043813           97 PY   98 (110)
Q Consensus        97 p~   98 (110)
                      |.
T Consensus        92 ~~   93 (96)
T PF14368_consen   92 PP   93 (96)
T ss_dssp             S-
T ss_pred             CC
Confidence            74

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.09  E-value=2.3e-11  Score=74.24  Aligned_cols=51  Identities=39%  Similarity=0.902  Sum_probs=41.8

Q ss_pred             cccChHhhhcCC-CCCcCCCCC--------Ccccc--ccccccCCccccc-ChHHHhcccCcCCC
Q 043813           42 LTPCVSYVSYGG-AVPTNCCNG--------TVCTC--LKQAVSGISYTRY-QLGLAAGLPGKCGL   94 (110)
Q Consensus        42 L~pC~~yl~~~~-~Ps~~CC~~--------~~ClC--lk~~~~~~~~~~i-n~~~a~~LP~~Cgv   94 (110)
                      |.||++|+++++ .|+++||++        ..|+|  +++......  ++ |.+++.+||++||+
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~--~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLL--GLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCcccccc--CcccHHHHHhchHhcCC
Confidence            579999999875 899999999        47888  666554443  44 79999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=98.59  E-value=1.9e-08  Score=62.06  Aligned_cols=64  Identities=41%  Similarity=0.838  Sum_probs=46.9

Q ss_pred             ccccccCcccChHhhhcC--C-CCCcCCCCC------Ccccccc--ccccCCcc-cccChHHHhcccCcCCCCCCC
Q 043813           35 CRTVVNDLTPCVSYVSYG--G-AVPTNCCNG------TVCTCLK--QAVSGISY-TRYQLGLAAGLPGKCGLNIPY   98 (110)
Q Consensus        35 C~~v~~~L~pC~~yl~~~--~-~Ps~~CC~~------~~ClClk--~~~~~~~~-~~in~~~a~~LP~~Cgv~~p~   98 (110)
                      |.++...+.+|.+|++++  . .|+.+||++      ..|+|..  ........ ..++..++.+||+.||+..++
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~~   76 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLNSAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPPY   76 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhcccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCCC
Confidence            555566777999999986  3 788999999      5699943  32222210 015899999999999999875

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.49  E-value=4e-10  Score=72.86  Aligned_cols=61  Identities=33%  Similarity=0.747  Sum_probs=48.1

Q ss_pred             ccCcccChHhhhcCC-CCCcCCCCC-----Ccccc--ccccccC----------CcccccChHHHhcccCcCCCCCCCCC
Q 043813           39 VNDLTPCVSYVSYGG-AVPTNCCNG-----TVCTC--LKQAVSG----------ISYTRYQLGLAAGLPGKCGLNIPYQI  100 (110)
Q Consensus        39 ~~~L~pC~~yl~~~~-~Ps~~CC~~-----~~ClC--lk~~~~~----------~~~~~in~~~a~~LP~~Cgv~~p~~i  100 (110)
                      ...+.+|..|++++. .|+.+||++     ..|+|  ++.....          ..  +++..+|.+||+.||+++|+  
T Consensus        12 ~~~l~~c~~~~~~~~~~~~~~CC~~L~~l~~~C~C~~i~~~~~~~~~q~~~~~~~~--~~~~~~a~~LP~~C~v~~~~--   87 (90)
T PF00234_consen   12 QVRLSPCLPYLQGGCQQPSQQCCQQLRQLDPQCRCEAIRQMVRQVIQQQQQGGQEM--QIMAQRAQNLPSMCNVSPPY--   87 (90)
T ss_dssp             SSHHHGGHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHCTSTCSHHH--HHHHHHHHHHHHHTTSSSSS--
T ss_pred             cccccccHHHHhcccccchHHHhHHHHHHhHHhhCHHHHHHHHhhhhhhhhhHHHH--HHHHHHHHHHHHHCCCCCCC--
Confidence            345889999999876 788999999     77999  5544332          12  58999999999999999997  


Q ss_pred             CCCCCC
Q 043813          101 SPSTDC  106 (110)
Q Consensus       101 s~~~dC  106 (110)
                         +||
T Consensus        88 ---~~C   90 (90)
T PF00234_consen   88 ---TDC   90 (90)
T ss_dssp             ---S-G
T ss_pred             ---CCC
Confidence               666

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=88.54  E-value=0.25  Score=32.24  Aligned_cols=66  Identities=26%  Similarity=0.587  Sum_probs=41.0

Q ss_pred             ccccccCcccChHhhhc-----CCCCCcCCCCC---------Ccccc--ccccccCCcccccChH-HHhcccCcCCCCCC
Q 043813           35 CRTVVNDLTPCVSYVSY-----GGAVPTNCCNG---------TVCTC--LKQAVSGISYTRYQLG-LAAGLPGKCGLNIP   97 (110)
Q Consensus        35 C~~v~~~L~pC~~yl~~-----~~~Ps~~CC~~---------~~ClC--lk~~~~~~~~~~in~~-~a~~LP~~Cgv~~p   97 (110)
                      |.....+|.-|.+.+..     +.++..+||.-         ..|+|  +|...-.+-  ++|.+ ....|-..||...|
T Consensus         2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~vlg~i--~~~ipv~l~~lln~CGk~~p   79 (85)
T PF14547_consen    2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANVLGLI--NVNIPVALNLLLNACGKTVP   79 (85)
T ss_pred             CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhccccc--ccccccHHHHHHHHhCCcCc
Confidence            44333467788888721     22566889988         78999  554332211  33332 56677788999877


Q ss_pred             CCCCCCCCC
Q 043813           98 YQISPSTDC  106 (110)
Q Consensus        98 ~~is~~~dC  106 (110)
                          ++++|
T Consensus        80 ----~gf~C   84 (85)
T PF14547_consen   80 ----SGFTC   84 (85)
T ss_pred             ----CCCcC
Confidence                56666

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=80.16  E-value=0.84  Score=29.85  Aligned_cols=61  Identities=30%  Similarity=0.623  Sum_probs=36.9

Q ss_pred             CccccccCcccChHhhhc-----CCCCCcCCCCC---------Ccccc--ccccccCCcccccChH-HHhcccCcCCCCC
Q 043813           34 TCRTVVNDLTPCVSYVSY-----GGAVPTNCCNG---------TVCTC--LKQAVSGISYTRYQLG-LAAGLPGKCGLNI   96 (110)
Q Consensus        34 ~C~~v~~~L~pC~~yl~~-----~~~Ps~~CC~~---------~~ClC--lk~~~~~~~~~~in~~-~a~~LP~~Cgv~~   96 (110)
                      .|-....++.-|..-+..     +.+|..+||.-         ..|+|  +|.....+   .+|.+ +..-+-..||...
T Consensus         3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~lgi---~~~~pv~l~llln~CGk~~   79 (85)
T cd01958           3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANILGI---SINIPVALSLLLNSCGRNV   79 (85)
T ss_pred             CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccccCc---ccccChhHHHHHHHHcCcC
Confidence            455444567778877642     22566889987         78999  54332222   23333 4455556799887


Q ss_pred             C
Q 043813           97 P   97 (110)
Q Consensus        97 p   97 (110)
                      |
T Consensus        80 P   80 (85)
T cd01958          80 P   80 (85)
T ss_pred             C
Confidence            7

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	110
1t12_A	91	Solution Structure Of A New Ltp1 Length = 91		4e-13
2alg_A	92	Crystal Structure Of Peach Pru P3, The Prototypic M		3e-12
2ljo_A	93	3d Solution Structure Of Lipid Transfer Protein Lc-		8e-11
1fk0_A	93	Structural Basis Of Non-Specific Lipid Binding In M		1e-10
1be2_A	91	Lipid Transfer Protein Complexed With Palmitate, Nm		5e-10
1mid_A	91	Non-Specific Lipid Transfer Protein 1 From Barley I		5e-10
1siy_A	91	Nmr Structure Of Mung Bean Non-Specific Lipid Trans		6e-10
1uva_A	91	Lipid Binding In Rice Nonspecific Lipid Transfer Pr		2e-09
1bwo_A	90	The Crystal Structure Of Wheat Non-Specific Transfe		1e-06
1cz2_A	90	Solution Structure Of Wheat Ns-Ltp Complexed With P		3e-06

>pdb|1T12|A Chain A, Solution Structure Of A New Ltp1 Length = 91

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 18/93 (19%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT---------------VCTCLKQAVSGISY 77
           +TC  V ++L PC++Y+   G +   CC G                 CTCLK A   IS 
Sbjct: 2   ITCGQVTSNLAPCLAYLRNTGPL-GRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISG 60
Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
               LG AAGLP  CG+NIPY+ISPSTDCS+VQ
Sbjct: 61  --INLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 91

>pdb|2ALG|A Chain A, Crystal Structure Of Peach Pru P3, The Prototypic Member Of The Family Of Plant Non-Specific Lipid Transfer Protein Pan-Allergens Length = 92

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 23/96 (23%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQ---AVSG 74
           +TC  V + L PC+ YV  GGAVP  CCNG                 C CLKQ   +V G
Sbjct: 2   ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPG 61
Query: 75  ISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
           ++        AA LPGKCG++IPY+IS ST+C+ V+
Sbjct: 62  VNPNN-----AAALPGKCGVSIPYKISASTNCATVK 92

>pdb|2LJO|A Chain A, 3d Solution Structure Of Lipid Transfer Protein Lc-Ltp2 Length = 93

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 17/93 (18%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           ++C  V +DL+PC++Y++ G      CC G                 C CLK A   I  
Sbjct: 2   ISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSI-- 59
Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
           T+     AA LPGKCG+NIPY+IS +T+C+ V+
Sbjct: 60  TKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 92

>pdb|1FK0|A Chain A, Structural Basis Of Non-Specific Lipid Binding In Maize Lipid-Transfer Protein Complexes With Capric Acid Revealed By High-Resolution X-Ray Crystallography Length = 93

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 18/94 (19%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPT-NCCNG---------------TVCTCLKQAVSGIS 76
           ++C  V + + PC+SY    G+ P+  CC+G                 C CLK A +G+S
Sbjct: 2   ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS 61
Query: 77  YTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                 G AA +P KCG++IPY IS STDCSRV 
Sbjct: 62  G--LNAGNAASIPSKCGVSIPYTISTSTDCSRVN 93

>pdb|1BE2|A Chain A, Lipid Transfer Protein Complexed With Palmitate, Nmr, 10 Structures Length = 91

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           + C  V + + PC++YV  G      CCNG               TVC CLK    GI  
Sbjct: 1   LNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIH- 59
Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
               L  AA +P KC +N+PY ISP  DCSR+
Sbjct: 60  -NLNLNNAASIPSKCNVNVPYTISPDIDCSRI 90

>pdb|1MID|A Chain A, Non-Specific Lipid Transfer Protein 1 From Barley In Complex With L-Alfa-Lysophosphatidylcholine, Laudoyl Length = 91

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           + C  V + + PC++YV  G      CCNG               TVC CLK    GI  
Sbjct: 1   LNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIH- 59
Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
               L  AA +P KC +N+PY ISP  DCSR+
Sbjct: 60  -NLNLNNAASIPSKCNVNVPYTISPDIDCSRI 90

>pdb|1SIY|A Chain A, Nmr Structure Of Mung Bean Non-Specific Lipid Transfer Protein 1 Length = 91

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 23/96 (23%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQA---VSG 74
           +TC  V  +L  C+ ++  GG VP +CC G                VC+CLK A   V G
Sbjct: 1   MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRG 60
Query: 75  ISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
           I+        A  LPGKCG+NIPY+IS ST+C+ + 
Sbjct: 61  INPNN-----AEALPGKCGVNIPYKISTSTNCNSIN 91

>pdb|1UVA|A Chain A, Lipid Binding In Rice Nonspecific Lipid Transfer Protein-1 Complexes From Oryza Sativa Length = 91

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           +TC  V + + PC++Y   G      CC+G               T C CLK A  GI  
Sbjct: 1   ITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKG 60
Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                G AA +P KCG+++PY IS S DCSRV 
Sbjct: 61  --LNAGNAASIPSKCGVSVPYTISASIDCSRVS 91

>pdb|1BWO|A Chain A, The Crystal Structure Of Wheat Non-Specific Transfer Protein Complexed With Two Molecules Of Phospholipid At 2.1 A Resolution Length = 90

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           + C  V + + PC+SYV  G      CC+G               + C CLK    GI  
Sbjct: 1   IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHN 60
Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                  A  +P KCG+N+PY IS + DCSRV
Sbjct: 61  LNEDN--ARSIPPKCGVNLPYTISLNIDCSRV 90

>pdb|1CZ2|A Chain A, Solution Structure Of Wheat Ns-Ltp Complexed With Prostaglandin B2 Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 17/91 (18%)
Query: 34  TCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYT 78
            C  V + + PC+SYV  G      CC+G               + C CLK    GI   
Sbjct: 2   DCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNL 61
Query: 79  RYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                 A  +P KCG+N+PY IS + DCSRV
Sbjct: 62  NEDN--ARSIPPKCGVNLPYTISLNIDCSRV 90

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	110
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	8e-22
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	3e-21
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	1e-20
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	5e-20
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	2e-19

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A* Length = 92

 Score = 81.0 bits (200), Expect = 8e-22
 Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 17/93 (18%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           +TC  V + L PC+ YV  GGAVP  CCNG                 C CLKQ  + +  
Sbjct: 2   ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP- 60

Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
                  AA LPGKCG++IPY+IS ST+C+ V+
Sbjct: 61  -GVNPNNAAALPGKCGVSIPYKISASTNCATVK 92

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var} Length = 91

 Score = 79.5 bits (196), Expect = 3e-21
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 17/92 (18%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           +TC  V  +L  C+ ++  GG VP +CC G                VC+CLK A   +  
Sbjct: 1   MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR- 59

Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                  A  LPGKCG+NIPY+IS ST+C+ +
Sbjct: 60  -GINPNNAEALPGKCGVNIPYKISTSTNCNSI 90

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A* Length = 90

 Score = 78.3 bits (193), Expect = 1e-20
 Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 17/92 (18%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           + C  V + + PC+SYV  G      CC+G               + C CLK    GI  
Sbjct: 1   IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH- 59

Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                  A  +P KCG+N+PY IS + DCSRV
Sbjct: 60  -NLNEDNARSIPPKCGVNLPYTISLNIDCSRV 90

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum} Length = 91

 Score = 76.8 bits (189), Expect = 5e-20
 Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 18/93 (19%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISY 77
           +TC  V ++L PC++Y+   G +   CC G                 CTCLK A   IS 
Sbjct: 2   ITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS- 59

Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 110
               LG AAGLP  CG+NIPY+ISPSTDCS+VQ
Sbjct: 60  -GINLGKAAGLPSTCGVNIPYKISPSTDCSKVQ 91

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 75.3 bits (185), Expect = 2e-19
 Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 18/93 (19%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPT-NCCNG---------------TVCTCLKQAVSGIS 76
           ++C  V + + PC+SY    G+ P+  CC+G                 C CLK A +G+S
Sbjct: 2   ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS 61

Query: 77  YTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
                 G AA +P KCG++IPY IS STDCSRV
Sbjct: 62  --GLNAGNAASIPSKCGVSIPYTISTSTDCSRV 92

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	110
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.9
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.89
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.88
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.88
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.88
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.88
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.45
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.35
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.34

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.90  E-value=2.5e-26  Score=151.51  Aligned_cols=77  Identities=44%  Similarity=1.017  Sum_probs=70.0

Q ss_pred             ccCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCC
Q 043813           32 QVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNI   96 (110)
Q Consensus        32 ~~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~   96 (110)
                      +++|+++...|.||++|++|++.|++.||++               ..|.|+|+.+..++  +||.+||.+||++|||++
T Consensus         1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~--~in~~~a~~LP~~CgV~~   78 (93)
T 2ljo_A            1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSIT--KLNTNNAAALPGKCGVNI   78 (93)
T ss_dssp             CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCT--TCCHHHHHHHHHHHTCCC
T ss_pred             CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccC--CcCHHHHHhhhHhcCCCC
Confidence            4789999999999999999887899999998               34777998877676  899999999999999999


Q ss_pred             CCCCCCCCCCCCCC
Q 043813           97 PYQISPSTDCSRVQ  110 (110)
Q Consensus        97 p~~is~~~dC~~i~  110 (110)
                      |||||+++||++|+
T Consensus        79 p~~Is~~~dC~~v~   92 (93)
T 2ljo_A           79 PYKISTTTNCNTVK   92 (93)
T ss_dssp             SSCCSTTCCGGGCC
T ss_pred             CCCCCCCCCCCCCC
Confidence            99999999999996

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.89  E-value=3e-25  Score=146.03  Aligned_cols=77  Identities=47%  Similarity=1.012  Sum_probs=69.8

Q ss_pred             ccCccccccCcccChHhhhcCC-CCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCC
Q 043813           32 QVTCRTVVNDLTPCVSYVSYGG-AVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLN   95 (110)
Q Consensus        32 ~~~C~~v~~~L~pC~~yl~~~~-~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~   95 (110)
                      +++|+++...|.||++|+++++ .|+++||++               ..|+|++.....++  +||.++|++||++||++
T Consensus         1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~--~in~~~A~~LP~~C~v~   78 (93)
T 1afh_A            1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS--GLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTST--TCCHHHHHHHHHHHHCC
T ss_pred             CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeecccccccc--CcCHHHHHHHHHHcCCC
Confidence            3689999999999999999877 688899999               26999987777776  79999999999999999


Q ss_pred             CCCCCCCCCCCCCCC
Q 043813           96 IPYQISPSTDCSRVQ  110 (110)
Q Consensus        96 ~p~~is~~~dC~~i~  110 (110)
                      +|||||+++||++|+
T Consensus        79 ~p~~is~~~dC~~v~   93 (93)
T 1afh_A           79 IPYTISTSTDCSRVN   93 (93)
T ss_dssp             CSSCCSTTCCSSSCC
T ss_pred             CCCCCCCCCCCccCC
Confidence            999999999999986

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.88  E-value=5.5e-25  Score=144.24  Aligned_cols=76  Identities=45%  Similarity=1.020  Sum_probs=69.2

Q ss_pred             cCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCCC
Q 043813           33 VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        33 ~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      ++|+++...|.||++|+++++.|+++||++               ..|+|+|+.+..++  +||.++|++||++||+++|
T Consensus         1 i~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~--~in~~~A~~LP~~Cgv~~p   78 (91)
T 1siy_A            1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVR--GINPNNAEALPGKCGVNIP   78 (91)
T ss_dssp             CCTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCS--SCCHHHHHHHHHHHTCCCS
T ss_pred             CCHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccC--CcCHHHHHHHHHHcCCCCC
Confidence            479999999999999999877799999999               26999988777776  7999999999999999999


Q ss_pred             CCCCCCCCCCCCC
Q 043813           98 YQISPSTDCSRVQ  110 (110)
Q Consensus        98 ~~is~~~dC~~i~  110 (110)
                      |+||+++||++|+
T Consensus        79 ~~is~~~dC~~v~   91 (91)
T 1siy_A           79 YKISTSTNCNSIN   91 (91)
T ss_dssp             SCSCTTSCSSTTC
T ss_pred             CCCCCCCCCccCC
Confidence            9999999999986

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.88  E-value=4.3e-25  Score=144.56  Aligned_cols=75  Identities=43%  Similarity=0.894  Sum_probs=68.7

Q ss_pred             cCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCCC
Q 043813           33 VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        33 ~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      ++|+++...|.||++|+++++.|+++||++               ..|+|+|+.+..++  +||.++|++||++||+++|
T Consensus         1 i~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~--~in~~~A~~LP~~C~v~~p   78 (90)
T 1bwo_A            1 IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH--NLNEDNARSIPPKCGVNLP   78 (90)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCT--TCCHHHHHTHHHHHTCCCS
T ss_pred             CCHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccC--CcCHHHHHHHHHHcCCCCC
Confidence            479999999999999999877799999999               27999988877776  7999999999999999999


Q ss_pred             CCCCCCCCCCCC
Q 043813           98 YQISPSTDCSRV  109 (110)
Q Consensus        98 ~~is~~~dC~~i  109 (110)
                      ||||+++||++|
T Consensus        79 ~~is~~~dC~~v   90 (90)
T 1bwo_A           79 YTISLNIDCSRV   90 (90)
T ss_dssp             SCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCC
Confidence            999999999987

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.88  E-value=5.7e-25  Score=144.28  Aligned_cols=76  Identities=55%  Similarity=1.124  Sum_probs=68.5

Q ss_pred             ccCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCC
Q 043813           32 QVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNI   96 (110)
Q Consensus        32 ~~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~   96 (110)
                      +++|+++...|.||++|+++++.|+ +||++               ..|+|+|+.+..++  +||.++|++||++||+++
T Consensus         1 a~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~--~in~~~A~~LP~~C~v~~   77 (91)
T 1t12_A            1 AITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAIS--GINLGKAAGLPSTCGVNI   77 (91)
T ss_dssp             CCCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCT--TCCHHHHHHHHHHTTCCC
T ss_pred             CCChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCCccccccccC--CcChhHHHHHHHHcCCCC
Confidence            3689999999999999999866677 99999               38999987766776  799999999999999999


Q ss_pred             CCCCCCCCCCCCCC
Q 043813           97 PYQISPSTDCSRVQ  110 (110)
Q Consensus        97 p~~is~~~dC~~i~  110 (110)
                      |||||+++||++|+
T Consensus        78 p~~is~~~dC~~v~   91 (91)
T 1t12_A           78 PYKISPSTDCSKVQ   91 (91)
T ss_dssp             SSCSSSSSCCTTCC
T ss_pred             CCCCCCCCCCccCC
Confidence            99999999999986

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.88  E-value=3.7e-25  Score=145.33  Aligned_cols=77  Identities=51%  Similarity=1.049  Sum_probs=69.8

Q ss_pred             ccCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCC
Q 043813           32 QVTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNI   96 (110)
Q Consensus        32 ~~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~   96 (110)
                      +++|+++...|.||++|++++++|+++||++               ..|+|+++....++  +||.++|++||++||+++
T Consensus         1 ~~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~--~in~~~A~~LP~~Cgv~~   78 (92)
T 2alg_A            1 MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP--GVNPNNAAALPGKCGVSI   78 (92)
T ss_dssp             CCCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST--TCCHHHHHHHHHHTTCCC
T ss_pred             CCChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC--ccChHHHHHHHHHcCCCC
Confidence            3679999999999999999887888999999               36999887766776  799999999999999999


Q ss_pred             CCCCCCCCCCCCCC
Q 043813           97 PYQISPSTDCSRVQ  110 (110)
Q Consensus        97 p~~is~~~dC~~i~  110 (110)
                      ||+||+++||++|+
T Consensus        79 p~~is~~~dC~~v~   92 (92)
T 2alg_A           79 PYKISASTNCATVK   92 (92)
T ss_dssp             SSCSSTTSCGGGCC
T ss_pred             CCCCCCCCCCccCC
Confidence            99999999999986

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.45  E-value=1.2e-15  Score=96.67  Aligned_cols=65  Identities=25%  Similarity=0.475  Sum_probs=54.4

Q ss_pred             ccCccccccCcccChHhhhcC--CCCCcCCCCC-----Ccccccccc---ccCCcccccChHHHhcccCcCCCCCCCC
Q 043813           32 QVTCRTVVNDLTPCVSYVSYG--GAVPTNCCNG-----TVCTCLKQA---VSGISYTRYQLGLAAGLPGKCGLNIPYQ   99 (110)
Q Consensus        32 ~~~C~~v~~~L~pC~~yl~~~--~~Ps~~CC~~-----~~ClClk~~---~~~~~~~~in~~~a~~LP~~Cgv~~p~~   99 (110)
                      ..+|+++...|.||++|++++  ..|+++||++     ..|+|.+..   +.++   +||.++|++||++||+++||.
T Consensus         2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~---gin~~~A~~LP~~Cgv~~p~~   76 (77)
T 2rkn_A            2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSF---GVDPELASALPKQCGLANAPT   76 (77)
T ss_dssp             CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHH---TBCHHHHHHHHHHTTCSCCCC
T ss_pred             cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhc---CcCHHHHHHHHHHcCCCCCCC
Confidence            467999999999999999984  3889999999     579996544   3334   699999999999999998863

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.35  E-value=2e-14  Score=89.03  Aligned_cols=55  Identities=27%  Similarity=0.564  Sum_probs=47.2

Q ss_pred             cCcccChHhhhcCCCCCcCCCCC----Ccccc--ccccccCCcccccChHHHhcccCcCCCCCC
Q 043813           40 NDLTPCVSYVSYGGAVPTNCCNG----TVCTC--LKQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        40 ~~L~pC~~yl~~~~~Ps~~CC~~----~~ClC--lk~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      ..|.||++|++++++||++||++    ..|+|  +|+.... .  +||.++|++||++||+++|
T Consensus         5 ~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~-~--~in~~~A~~Lp~~Cgv~~P   65 (67)
T 1n89_A            5 SQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYG-Q--YIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             STTHHHHHHHTTCCCCCHHHHHHHHHHSSHHHHGGGCSTTH-H--HHTCHHHHHHHHHHTSCCS
T ss_pred             hhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccc-c--ccCHHHHHHHHHHcCCCCC
Confidence            47899999999888999999999    89999  6665432 2  6999999999999999876

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.34  E-value=3e-14  Score=88.73  Aligned_cols=59  Identities=25%  Similarity=0.566  Sum_probs=49.2

Q ss_pred             CccccccCcccChHhhhcCCCCCcCCCCC----Ccccc--ccccccCCcccccChHHHhcccCcCCCCCC
Q 043813           34 TCRTVVNDLTPCVSYVSYGGAVPTNCCNG----TVCTC--LKQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        34 ~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~----~~ClC--lk~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      +|+.  ..|.||++|++++++||++||++    ..|+|  +|+.... .  +||.++|++||++||+++|
T Consensus         2 ~C~~--~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~-~--~in~~~A~~Lp~~Cgv~~P   66 (69)
T 1l6h_A            2 GCNA--GQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYG-R--YVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             CSTT--TTHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHHHTTCSSHH-H--HTTTTTGGGCCCCCSSCSC
T ss_pred             CCCh--hhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccc-c--ccCHHHHHHHHHHcCCCCC
Confidence            4655  47899999999888899999999    78999  6665332 2  6999999999999999876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	110
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	1e-18
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	5e-17

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 72.2 bits (177), Expect = 1e-18
 Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 17/92 (18%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPTNCCNGT---------------VCTCLKQAVSGISY 77
           + C  V + + PC++YV  G      CCNG                VC CLK    GI  
Sbjct: 1   LNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIH- 59

Query: 78  TRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
               L  AA +P KC +N+PY ISP  DCSR+
Sbjct: 60  -NLNLNNAASIPSKCNVNVPYTISPDIDCSRI 90

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 68.0 bits (166), Expect = 5e-17
 Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 18/93 (19%)

Query: 33  VTCRTVVNDLTPCVSYVSYGGAVPT-NCCNGT---------------VCTCLKQAVSGIS 76
           ++C  V + + PC+SY    G+ P+  CC+G                 C CLK A +   
Sbjct: 2   ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAA--G 59

Query: 77  YTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 109
            +    G AA +P KCG++IPY IS STDCSRV
Sbjct: 60  VSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 92

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	110
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.89
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.89
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	98.87
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	98.83

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.89  E-value=1e-25  Score=146.29  Aligned_cols=76  Identities=46%  Similarity=0.989  Sum_probs=68.5

Q ss_pred             cCccccccCcccChHhhhcCCCCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCCCC
Q 043813           33 VTCRTVVNDLTPCVSYVSYGGAVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        33 ~~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      ++|+++...|.||++|++|+++|++.||++               ..|+|+|+.+..++  +||.+||++||++||+++|
T Consensus         1 i~C~~v~~~l~pCl~Yl~g~~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~~--~in~~ra~~LP~~C~v~~p   78 (91)
T d1mida_           1 LNCGQVDSKMKPCLTYVQGGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIH--NLNLNNAASIPSKCNVNVP   78 (91)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCT--TCCHHHHHHHHHHTTCCCC
T ss_pred             CCHHHHHHHHHhhHHHHcCCCCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccCC--CcCHHHHHhchHhcCCCCC
Confidence            479999999999999999887999999999               25667988766665  7999999999999999999


Q ss_pred             CCCCCCCCCCCCC
Q 043813           98 YQISPSTDCSRVQ  110 (110)
Q Consensus        98 ~~is~~~dC~~i~  110 (110)
                      ||||+++||++||
T Consensus        79 ~pis~~~dC~~i~   91 (91)
T d1mida_          79 YTISPDIDCSRIY   91 (91)
T ss_dssp             SCCCTTCCGGGCC
T ss_pred             CCCCCCCCCCCCC
Confidence            9999999999997

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.89  E-value=1.3e-25  Score=146.37  Aligned_cols=77  Identities=47%  Similarity=1.012  Sum_probs=69.1

Q ss_pred             ccCccccccCcccChHhhhcCC-CCCcCCCCC---------------CccccccccccCCcccccChHHHhcccCcCCCC
Q 043813           32 QVTCRTVVNDLTPCVSYVSYGG-AVPTNCCNG---------------TVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLN   95 (110)
Q Consensus        32 ~~~C~~v~~~L~pC~~yl~~~~-~Ps~~CC~~---------------~~ClClk~~~~~~~~~~in~~~a~~LP~~Cgv~   95 (110)
                      +++|+++...|.||++|++|++ .|++.||++               ..|+|+|+....+.  +||.+|+.+||++||++
T Consensus         1 Ai~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~~--~in~~ra~~LP~~C~v~   78 (93)
T d1fk5a_           1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVS--GLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CCCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCT--TCCHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHhhhhHHHHhCCCCCCCCchhHHHHHHHHHccCCccHHHHHHhhhhcccccC--CcCHHHHHhhhHhcCCC
Confidence            4789999999999999999987 899999999               34777988766554  79999999999999999


Q ss_pred             CCCCCCCCCCCCCCC
Q 043813           96 IPYQISPSTDCSRVQ  110 (110)
Q Consensus        96 ~p~~is~~~dC~~i~  110 (110)
                      +||||++++||++|+
T Consensus        79 l~~pis~~~dCs~i~   93 (93)
T d1fk5a_          79 IPYTISTSTDCSRVN   93 (93)
T ss_dssp             CSSCCSTTCCGGGCC
T ss_pred             CCCCCCCCCCCCcCC
Confidence            999999999999996

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=98.87  E-value=4.8e-11  Score=72.38  Aligned_cols=58  Identities=26%  Similarity=0.563  Sum_probs=49.1

Q ss_pred             ccccccCcccChHhhhcCCCCCcCCCCC----Ccccc--ccccccCCcccccChHHHhcccCcCCCCCC
Q 043813           35 CRTVVNDLTPCVSYVSYGGAVPTNCCNG----TVCTC--LKQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        35 C~~v~~~L~pC~~yl~~~~~Ps~~CC~~----~~ClC--lk~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      |+..  .|+||++.++++++||++||..    ..|+|  +|+..  +.. .||..+|+++-+.|||++|
T Consensus         2 C~p~--~L~~C~~Ai~~g~~PS~~CC~kLkeQ~~ClC~Y~kdP~--~~~-yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           2 CQAS--QLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPT--YGQ-YIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             CCGG--GGGGGHHHHHHCCCCCHHHHHHHHHHGGGHHHHTTCTT--THH-HHTSHHHHHHHHHTTCCCC
T ss_pred             CChh--hccccHHHHhcCCCCcHHHHHHHHhcCCccceecCCcc--HHH-HcCCHHHHHHHHhcCCCCC
Confidence            5553  6999999999999999999999    88999  56654  322 6999999999999999877

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=98.83  E-value=5.2e-11  Score=72.61  Aligned_cols=59  Identities=25%  Similarity=0.533  Sum_probs=49.8

Q ss_pred             CccccccCcccChHhhhcCCCCCcCCCCC----Ccccc--ccccccCCcccccChHHHhcccCcCCCCCC
Q 043813           34 TCRTVVNDLTPCVSYVSYGGAVPTNCCNG----TVCTC--LKQAVSGISYTRYQLGLAAGLPGKCGLNIP   97 (110)
Q Consensus        34 ~C~~v~~~L~pC~~yl~~~~~Ps~~CC~~----~~ClC--lk~~~~~~~~~~in~~~a~~LP~~Cgv~~p   97 (110)
                      .|+..  .|+||++.++++++||++||..    ..|+|  +|+...+.   .||..+++++-..|||++|
T Consensus         2 ~C~p~--~L~~C~~ai~~g~~PS~~CC~kLkeQ~~ClC~Y~k~P~~~~---yv~spnarkv~~aCgvp~P   66 (69)
T d1l6ha_           2 GCNAG--QLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGR---YVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             CSTTT--THHHHHHHHTTCCSTTHHHHHHHHHHHHHHHHHTTCSSHHH---HTTTTTGGGCCCCCSSCSC
T ss_pred             CCChh--hccccHHHHhCCCCCcHHHHHHHHhcCCccceeccCccHHH---HcCCHHHHHHHHhcCCCCC
Confidence            46653  6999999999999999999999    78999  56654322   6999999999999999877