Citrus Sinensis ID: 043893


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
METSFTINGIWKICISVSFFLGCIIFVLSLNSGRSNISLFTVRSVAISVTPSTGFATLIKSDNPVEEEKLCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYEKWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVLSNSRDISNSSHLLFDVSF
ccccccccccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccccccccccccccccccccEEEEccEEEcccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHccccEEEEEEccccHHHHHHHHHHccccccccEEEEEEccEEEEEEEEcccEEEEEEEcccEEEEcccccccccEEEcccccHHHHccccccEEEEEcccccccccEEEEcEEEcccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHccccccEEEEEcccccccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccccccEEccc
ccccEEEccHcHHHHHHHHHHHHHHHHHHHHHcccHEEEEccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccHccccccHHcEEEEcccccccccccHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHccccccEEEEccccEEEEEEEEccEEEEEEEccEEEEEccccccccEEEEccHHHHHHHHcccccEEEEEcEEEEEcccccEccccccccccEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEHHHHHHHHcccccHcccccccccHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccccEEEEEcc
METSFTINGIWKICISVSFFLGCIIFVLSlnsgrsnislFTVRSVAISvtpstgfatliksdnpveeeklcnifngkwvyngeasplyneaqcpflsdqvscqrngrpdveyekwtwkaegceiprfnATDMLERLKNKRVIIVGDSLNRNQWESLACLLytaippsrvhvdvqNGVYKVLRALDydcsvefywspfLVQLDASNALGSRILRLDELSASaqkwkgadVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFrsispehkgeqwcynttepitdesyvakFPKSMVEIVKRTiggmstpvkylnitklsqyrvdahptiyTKKREFLIAKQQMQQEtyadcshwclpglpdtwNTLLYASMVLSnsrdisnsshllfdvsf
METSFTINGIWKICISVSFFLGCIIFVLSLNSGRSNISLFTVRSVAISVTPSTgfatliksdnpvEEEKLCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRpdveyekwtwkaegceiprfnATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRsispehkgeqwCYNTTEPITDESYVAKFPKSMVEIVKrtiggmstpvkylnitklsqyrvdAHPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVLSnsrdisnsshllfdvsf
METSFTINGIWKICISVSFFLGCIIFVLSLNSGRSNISLFTVRSVAISVTPSTGFATLIKSDNPVEEEKLCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYEKWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVLSNSRDISNSSHLLFDVSF
****FTINGIWKICISVSFFLGCIIFVLSLNSGRSNISLFTVRSVAISVTPSTGFATLIKSDNPVEEEKLCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYEKWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVLS*****************
***S**INGIWKICISVSFFLGCIIFVLSLNSGRSNISLFT*****************************CNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYEKWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIYTKKREF*********ETYADCSHWCLPGLPDTWNTLLYA*****************FDVSF
METSFTINGIWKICISVSFFLGCIIFVLSLNSGRSNISLFTVRSVAISVTPSTGFATLIKSDNPVEEEKLCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYEKWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVLSNSRDISNSSHLLFDVSF
**TSFTINGIWKICISVSFFLGCIIFVLSLNSGRSNISLFTVR**************************LCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYEKWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVLSNSRDI**SSHLLF*VSF
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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METSFTINGIWKICISVSFFLGCIIFVLSLNSGRSNISLFTVRSVAISVTPSTGFATLIKSDNPVEEEKLCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYEKWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVLSNSRDISNSSHLLFDVSF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
225446567414 PREDICTED: uncharacterized protein LOC10 0.952 0.963 0.604 1e-148
224146480381 predicted protein [Populus trichocarpa] 0.840 0.923 0.656 1e-143
449444959419 PREDICTED: uncharacterized protein LOC10 0.952 0.952 0.576 1e-142
359485447 532 PREDICTED: uncharacterized protein LOC10 0.763 0.601 0.601 1e-122
302143434374 unnamed protein product [Vitis vinifera] 0.763 0.855 0.601 1e-121
125526842473 hypothetical protein OsI_02852 [Oryza sa 0.773 0.684 0.563 1e-106
115438542479 Os01g0614300 [Oryza sativa Japonica Grou 0.773 0.676 0.560 1e-105
242053609483 hypothetical protein SORBIDRAFT_03g02781 0.794 0.689 0.518 1e-103
226528635460 uncharacterized protein LOC100274334 [Ze 0.792 0.721 0.507 1e-102
357130492466 PREDICTED: uncharacterized protein LOC10 0.799 0.718 0.533 1e-102
>gi|225446567|ref|XP_002276383.1| PREDICTED: uncharacterized protein LOC100250486 [Vitis vinifera] gi|302143401|emb|CBI21962.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/417 (60%), Positives = 314/417 (75%), Gaps = 18/417 (4%)

Query: 6   TINGIWKICISVSFFLGCIIFVLSLNSGRSNISLFTVRSVAISVT-------PSTGFA-- 56
           TI   WK+CI  SF +GCII VL LN  R++ +L  +++ AIS+T       PS  F+  
Sbjct: 4   TIIERWKLCICASF-IGCIILVLCLNQSRNSANLSALQNPAISITSFNQFPTPSVEFSAA 62

Query: 57  -TLI--KSDNPVEEEKLCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYE 113
            TLI  +       E  CNIF+G+WVY+  A P Y   QCPFLSDQVSC+RNGR D  YE
Sbjct: 63  STLIVFRPKAVNHNEDRCNIFDGQWVYDSRARPFYEGPQCPFLSDQVSCRRNGRSDTNYE 122

Query: 114 KWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDV 173
           KW+W+A+GCEIPRFNATDMLERL+ KRVIIVGDSLNRNQWESLACLLY+A+PPSR +++ 
Sbjct: 123 KWSWRAKGCEIPRFNATDMLERLRGKRVIIVGDSLNRNQWESLACLLYSAVPPSRAYIET 182

Query: 174 QNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFN 233
           ++ VYKV RA DY+CSVEFYWSPFLVQLD     G+R+LRLD+LS SA+ W+GAD+MVFN
Sbjct: 183 RSSVYKVFRAKDYNCSVEFYWSPFLVQLDVKKENGTRVLRLDKLSGSARLWRGADIMVFN 242

Query: 234 TGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSI 293
           TGHWW H+GK++AW+LF++ GKL+E + ++ A +IAM+TWA WI   +D  KT VFFRSI
Sbjct: 243 TGHWWAHQGKLRAWDLFQYRGKLVEEMEIESALDIAMKTWARWIRRKLDRNKTRVFFRSI 302

Query: 294 SPEHKGEQWCYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDA 353
           SP H G+Q CYN T+PI DES  A FPKS+ EI++ TI  M  PV+YLNIT LSQYR DA
Sbjct: 303 SPSHTGKQ-CYNETQPILDESDAASFPKSLTEIIEGTIKAMKNPVRYLNITNLSQYRRDA 361

Query: 354 HPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVLSNSRDISNS 410
           HP+IY++K E    ++Q ++E + DCSHWCLPGLPDTWN LLYAS+V   S  IS+S
Sbjct: 362 HPSIYSRKEE----ERQQRKEFHPDCSHWCLPGLPDTWNGLLYASLVFDTSGHISDS 414




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146480|ref|XP_002326021.1| predicted protein [Populus trichocarpa] gi|222862896|gb|EEF00403.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449444959|ref|XP_004140241.1| PREDICTED: uncharacterized protein LOC101217736 [Cucumis sativus] gi|449516329|ref|XP_004165199.1| PREDICTED: uncharacterized LOC101217736 [Cucumis sativus] Back     alignment and taxonomy information
>gi|359485447|ref|XP_002276891.2| PREDICTED: uncharacterized protein LOC100264389 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143434|emb|CBI21995.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|125526842|gb|EAY74956.1| hypothetical protein OsI_02852 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|115438542|ref|NP_001043565.1| Os01g0614300 [Oryza sativa Japonica Group] gi|54290286|dbj|BAD61231.1| leaf senescence related protein-like [Oryza sativa Japonica Group] gi|113533096|dbj|BAF05479.1| Os01g0614300 [Oryza sativa Japonica Group] gi|215740634|dbj|BAG97290.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|242053609|ref|XP_002455950.1| hypothetical protein SORBIDRAFT_03g027810 [Sorghum bicolor] gi|241927925|gb|EES01070.1| hypothetical protein SORBIDRAFT_03g027810 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|226528635|ref|NP_001142167.1| uncharacterized protein LOC100274334 [Zea mays] gi|194702182|gb|ACF85175.1| unknown [Zea mays] gi|413950593|gb|AFW83242.1| putative DUF231 domain containing family protein [Zea mays] Back     alignment and taxonomy information
>gi|357130492|ref|XP_003566882.1| PREDICTED: uncharacterized protein LOC100842643 [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
TAIR|locus:2088659556 TBL1 "AT3G12060" [Arabidopsis 0.792 0.597 0.430 4.2e-79
TAIR|locus:2096094475 TBL6 "AT3G62390" [Arabidopsis 0.778 0.686 0.421 6.3e-76
TAIR|locus:2170184608 TBR [Arabidopsis thaliana (tax 0.873 0.601 0.392 1e-75
TAIR|locus:2179172434 TBL3 "TRICHOME BIREFRINGENCE-L 0.782 0.755 0.398 1.9e-74
TAIR|locus:2082078487 ESK1 "ESKIMO 1" [Arabidopsis t 0.801 0.689 0.406 2.5e-74
TAIR|locus:2063125425 TBL33 "AT2G40320" [Arabidopsis 0.789 0.778 0.398 2.2e-73
TAIR|locus:2036631541 TBL2 "AT1G60790" [Arabidopsis 0.832 0.645 0.385 3.6e-73
TAIR|locus:2037498359 TBL42 "TRICHOME BIREFRINGENCE- 0.773 0.902 0.399 4.6e-73
TAIR|locus:2149947485 TBL5 "AT5G20590" [Arabidopsis 0.789 0.682 0.419 1.2e-72
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.768 0.800 0.395 2.5e-72
TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
 Identities = 152/353 (43%), Positives = 218/353 (61%)

Query:    65 VEEEKLCNIFNGKWVYNGEASPLYNEAQCPFLSDQVSCQRNGRPDVEYEKWTWKAEGCEI 124
             +E  K C  F G WV + ++ PLY    C  + +Q +C  NGRPDV+++K  WK + C +
Sbjct:   190 IESLKSCEFFEGDWVKD-DSYPLYKPGSCNLIDEQFNCISNGRPDVDFQKLKWKPKQCSL 248

Query:   125 PRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPP-SRV------HVDVQNGV 177
             PR N   +LE ++ +R++ VGDSLNRN WESL C+L  ++   S+V      H       
Sbjct:   249 PRLNGGKLLEMIRGRRLVFVGDSLNRNMWESLVCILKGSVKDESQVFEAHGRHQFRWEAE 308

Query:   178 YKVLRALDYDCSVEFYWSPFLVQ---LDASNALGSRILRLDELSASAQKWKGADVMVFNT 234
             Y  +   DY+C+VEF+ SPFLVQ   +   N      LRLD +  S++++KGAD++VFNT
Sbjct:   309 YSFVFK-DYNCTVEFFASPFLVQEWEVTEKNGTKKETLRLDLVGKSSEQYKGADILVFNT 367

Query:   235 GHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSIS 294
             GHWW H    K  + ++    +   L+VDEAF  A+ TW  W+D+NV+  K++VFFR  S
Sbjct:   368 GHWWTHEKTSKGEDYYQEGSTVHPKLDVDEAFRKALTTWGRWVDKNVNPKKSLVFFRGYS 427

Query:   295 PEH-KGEQW-----CYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQ 348
             P H  G QW     C + TEPI +E+Y+  +   M EI++R + GM TPV YLNIT+L+ 
Sbjct:   428 PSHFSGGQWNAGGACDDETEPIKNETYLTPYMLKM-EILERVLRGMKTPVTYLNITRLTD 486

Query:   349 YRVDAHPTIYTKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMVL 401
             YR DAHP+IY K++  L A++      Y DCSHWCLPG+PD+WN + YA +++
Sbjct:   487 YRKDAHPSIYRKQK--LSAEESKSPLLYQDCSHWCLPGVPDSWNEIFYAELLV 537




GO:0030244 "cellulose biosynthetic process" evidence=IMP
GO:0007129 "synapsis" evidence=RCA
GO:0007131 "reciprocal meiotic recombination" evidence=RCA
TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179172 TBL3 "TRICHOME BIREFRINGENCE-LIKE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082078 ESK1 "ESKIMO 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063125 TBL33 "AT2G40320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036631 TBL2 "AT1G60790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00018712001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (421 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 1e-110
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 1e-98
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 7e-22
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  328 bits (842), Expect = e-110
 Identities = 144/342 (42%), Positives = 208/342 (60%), Gaps = 20/342 (5%)

Query: 71  CNIFNGKWVYNGEASPLYNEAQCPFLSD-QVSCQRNGRPDVEYEKWTWKAEGCEIPRFNA 129
           C +F G WV + ++ PLY  + CP + D + +CQ  GRPD +Y K+ W+   CE+PRFN 
Sbjct: 53  CALFVGTWVRD-DSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNG 111

Query: 130 TDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCS 189
            + L ++K K V+ VGDSL RNQWESL CL+ +++P +R  +  +       + LDY  S
Sbjct: 112 LEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQM-SRGDPLSTFKFLDYGVS 170

Query: 190 VEFYWSPFLVQLDASNALGSRILRLDELSASAQKWKGADVMVFNTGHWWVHRGKIKAWEL 249
           + FY +P+LV +DA    G R+L+L+E+S +A  W+ ADV++FNTGHWW H+G ++ W+ 
Sbjct: 171 ISFYKAPYLVDIDAVQ--GKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDY 228

Query: 250 FEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKG-EQW------ 302
            E  G   ++++   A E A+ TWA+W+D NVD ++T VFF+SISP H    +W      
Sbjct: 229 IESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAST 288

Query: 303 ----CYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIY 358
               CY  T P++  +Y   +P  M  +V   I GM  P   L+IT LS+ R D HP+IY
Sbjct: 289 TTKNCYGETTPMSGMTYPGAYPDQM-RVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIY 347

Query: 359 TKKREFLIAKQQMQQETYADCSHWCLPGLPDTWNTLLYASMV 400
           +     L   Q+   +  ADCSHWCLPGLPDTWN L Y ++ 
Sbjct: 348 SGD---LSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 419
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.94
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.24
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 96.26
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 94.52
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 94.11
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 87.4
COG2845354 Uncharacterized protein conserved in bacteria [Fun 84.14
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 82.98
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 82.29
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=5e-116  Score=886.73  Aligned_cols=328  Identities=43%  Similarity=0.957  Sum_probs=299.7

Q ss_pred             CcCCCCCcCccCeeeeCCCCCCCCCCCCCC-CCcccccccccCCCCCcccceeEecCCCCCCCCCHHHHHHHhcCCcEEE
Q 043893           65 VEEEKLCNIFNGKWVYNGEASPLYNEAQCP-FLSDQVSCQRNGRPDVEYEKWTWKAEGCEIPRFNATDMLERLKNKRVII  143 (419)
Q Consensus        65 ~~~~~~CD~f~G~WV~d~~~~PlY~~~~Cp-~i~~~~nC~~nGRpD~~yl~WrWqP~gC~Lprfd~~~fLe~lrgKri~F  143 (419)
                      ..+.+.||+|+|+||+| +++|+|++++|| ||+++|||++|||||++|++|||||++|+||||||.+|||+||||||||
T Consensus        47 ~~~~~~CD~f~G~WV~D-~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~F  125 (387)
T PLN02629         47 QANQSTCALFVGTWVRD-DSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMF  125 (387)
T ss_pred             CCCccccCCCCCeEecC-CCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEE
Confidence            45678899999999999 689999999999 9999999999999999999999999999999999999999999999999


Q ss_pred             EecchhHHHHHHHHHhhcccCCCCceeEeeeCCeEEEEEEccCceEEEEEecceeeeccccCCCCcceeeecccchhhhc
Q 043893          144 VGDSLNRNQWESLACLLYTAIPPSRVHVDVQNGVYKVLRALDYDCSVEFYWSPFLVQLDASNALGSRILRLDELSASAQK  223 (419)
Q Consensus       144 VGDSl~Rnq~~SLlCLL~~~~~~~~~~~~~~~~~~~~~~f~~yn~TV~~~WsPfLv~~~~~~~~~~~~l~lD~~d~~~~~  223 (419)
                      |||||+|||||||+|||++++++..+.+..+++++ .|+|++||+||+||||||||+.+..+  +.++|+||+++..++.
T Consensus       126 VGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~-~~~F~~yN~TV~~ywspfLV~~~~~~--~~~~l~LD~id~~a~~  202 (387)
T PLN02629        126 VGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLS-TFKFLDYGVSISFYKAPYLVDIDAVQ--GKRVLKLEEISGNANA  202 (387)
T ss_pred             eccccchhHHHHHHHHhhccCCCCceeeecCCceE-EEEeccCCEEEEEEecceEEeeecCC--CceeEEecCcchhhhh
Confidence            99999999999999999999876655555566777 99999999999999999999987654  4578999999988899


Q ss_pred             ccCccEEEEeccccccccccccceeeeecCCeeccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCCCCC-c
Q 043893          224 WKGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQ-W  302 (419)
Q Consensus       224 w~~~DvLV~ntG~Ww~r~~~~~~~~~~~~g~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~Hfe~g-W  302 (419)
                      |+++|||||||||||.+++..+++++++.|++++++|++.+||++||+||++||++++++.+++|||||+||+||+|| |
T Consensus       203 w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~W  282 (387)
T PLN02629        203 WRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEW  282 (387)
T ss_pred             hccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCc
Confidence            999999999999999999988888999999988999999999999999999999999999999999999999999999 8


Q ss_pred             ----------ccCCcccCCCCCccCCCchhHHHHHHHHHccCCCCeEEeecccccccCccCCCCccCchhhhhhHHhhcC
Q 043893          303 ----------CYNTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYRVDAHPTIYTKKREFLIAKQQMQ  372 (419)
Q Consensus       303 ----------C~~~T~P~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLdIT~ls~~R~DgHps~y~~~~~~~~~~~~~~  372 (419)
                                |+++|+|+.+++++++.+. +++++++++++++.+|+|||||+||++|||||||+|++.   .+++++.+
T Consensus       283 n~gg~~~~~~C~~et~P~~~~~~~~~~~~-~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~---~~~~~~~~  358 (387)
T PLN02629        283 SAGASTTTKNCYGETTPMSGMTYPGAYPD-QMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGD---LSPSQRAN  358 (387)
T ss_pred             CCCCCCCCCCCccCCccCcCccccCcchH-HHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCC---CchhhccC
Confidence                      8889999987777665555 566889999999999999999999999999999999754   23455566


Q ss_pred             CCCCCCcccccCCCcchHHHHHHHHHHh
Q 043893          373 QETYADCSHWCLPGLPDTWNTLLYASMV  400 (419)
Q Consensus       373 ~~~~~DC~HWCLPGv~DtWNelL~~~L~  400 (419)
                      +..++||+||||||||||||||||++|+
T Consensus       359 p~~~~DC~HWCLPGvpDTWNelL~a~L~  386 (387)
T PLN02629        359 PDRSADCSHWCLPGLPDTWNQLFYTALF  386 (387)
T ss_pred             CCCCCCcccccCCCCCccHHHHHHHHHh
Confidence            7788999999999999999999999997



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.0 bits (121), Expect = 6e-07
 Identities = 54/415 (13%), Positives = 103/415 (24%), Gaps = 140/415 (33%)

Query: 61  SDNPVEEEKLCNIFNGKWVYNGEAS-------PLYNEAQCPFLSDQVSCQRNGRPDVEYE 113
               V+ +    IF   W+     +        L        L  Q+      R D    
Sbjct: 172 LSYKVQCKMDFKIF---WLNLKNCNSPETVLEMLQK------LLYQIDPNWTSRSDHSSN 222

Query: 114 KWTWKAEGCEIPRFNATDMLERLKNKRVIIVGDSLNRNQWESLACLLYTAIPPSRVHVDV 173
                       +     +   L+    ++              CLL        V ++V
Sbjct: 223 -----------IKLRIHSIQAELRR---LLKSKPYEN-------CLL--------VLLNV 253

Query: 174 QNGVYKVLRALDYDCSVEFYWSPFLV-QLDASNALGSRILRLDELSASAQKWKGADVMVF 232
           QN   K   A +  C +       L+                D LSA+            
Sbjct: 254 QNA--KAWNAFNLSCKI-------LLTTRFKQVT--------DFLSAATTT--------- 287

Query: 233 NTGHWWVHRGKIKAWELFEHD---GKLMENLNVD------EA-----FEIAM-------- 270
                  H            D     L++ L+        E        +++        
Sbjct: 288 -------HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340

Query: 271 -ETWAHWIDENVDATKTMVFFRSISPEHKGEQWCYNTTEPITDESY---VAKFPKSMVEI 326
             TW +W   N D   T++            +   N  EP         ++ FP S   I
Sbjct: 341 LATWDNWKHVNCDKLTTII------------ESSLNVLEPAEYRKMFDRLSVFPPS-AHI 387

Query: 327 VKRTI----GGMSTPVKYLNITKLSQYR-VDAHP-----TIYTKKREFLIAKQQMQQ--- 373
               +      +      + + KL +Y  V+  P     +I +   E  +  +       
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447

Query: 374 ---ETYADCSHWCLPGLPDTW------NTLLYASMVLSNSRDISNSSHLLFDVSF 419
              + Y     +    L   +      + + +    + +   ++    +  D  F
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF 502


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query419
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 97.47
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=97.47  E-value=0.00045  Score=61.78  Aligned_cols=92  Identities=16%  Similarity=0.227  Sum_probs=54.6

Q ss_pred             cCccEEEEeccccccccccccceeeeecCCeeccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCCCCCccc
Q 043893          225 KGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCY  304 (419)
Q Consensus       225 ~~~DvLV~ntG~Ww~r~~~~~~~~~~~~g~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~Hfe~gWC~  304 (419)
                      ..+|+||++.|..=               .    . ...+.|+..|+.+++.+.+.  ..+++++|-+..|......   
T Consensus        73 ~~pd~Vvi~~G~ND---------------~----~-~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~~---  127 (200)
T 4h08_A           73 TKFDVIHFNNGLHG---------------F----D-YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGEG---  127 (200)
T ss_dssp             SCCSEEEECCCSSC---------------T----T-SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESGG---
T ss_pred             CCCCeEEEEeeeCC---------------C----C-CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCccccc---
Confidence            56899999998641               0    0 12567889999998887664  3356788888888653211   


Q ss_pred             CCcccCCCCCccCCCchhHHHHHHHHHccCCCCeEEeecccccc
Q 043893          305 NTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQ  348 (419)
Q Consensus       305 ~~T~P~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLdIT~ls~  348 (419)
                        .....   .....-.+++++++++.++.  .+.++|+...+.
T Consensus       128 --~~~~~---~~~~~~~~~n~~~~~~a~~~--~v~~iD~~~~~~  164 (200)
T 4h08_A          128 --MKEFA---PITERLNVRNQIALKHINRA--SIEVNDLWKVVI  164 (200)
T ss_dssp             --GCEEC---THHHHHHHHHHHHHHHHHHT--TCEEECHHHHHT
T ss_pred             --ccccc---hhHHHHHHHHHHHHHHhhhc--ceEEEecHHhHh
Confidence              00000   00000112556666665543  688999876654




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query419
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 96.6
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 96.16
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 81.29
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.60  E-value=0.0027  Score=53.80  Aligned_cols=117  Identities=13%  Similarity=0.001  Sum_probs=54.9

Q ss_pred             cCccEEEEeccccccccccccceeeeecCCeeccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEEecCCCCCCCCccc
Q 043893          225 KGADVMVFNTGHWWVHRGKIKAWELFEHDGKLMENLNVDEAFEIAMETWAHWIDENVDATKTMVFFRSISPEHKGEQWCY  304 (419)
Q Consensus       225 ~~~DvLV~ntG~Ww~r~~~~~~~~~~~~g~~~~~~~~~~~Ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~Hfe~gWC~  304 (419)
                      ..+|+||+..|.-=..... .      .+.  ... ...+.|+..++.+++.+.+.  ..++.+++-+.-|.....+   
T Consensus        64 ~~~d~Vii~~G~ND~~~~~-~------~~~--~~~-~~~~~~~~~~~~~i~~i~~~--~~~~~ii~~~~~~~~~~~~---  128 (207)
T d3dc7a1          64 EDADFIAVFGGVNDYGRDQ-P------LGQ--YGD-CDMTTFYGALMMLLTGLQTN--WPTVPKLFISAIHIGSDFG---  128 (207)
T ss_dssp             TTCSEEEEECCHHHHHTTC-C------CCC--TTC-CSTTSHHHHHHHHHHHHHHH--CTTSCEEEEECCCCCSCSB---
T ss_pred             CCCCEEEEccCchhhhccc-C------ccc--ccc-ccHHHHHHHHHHHHHHHHHh--CCceEEEEecCCCCccccc---
Confidence            4589999998864111100 0      000  000 11234555666666666554  2344566655544443211   


Q ss_pred             CCcccCCCCCccCCCchhHHHHHHHHHccCCCCeEEeecccccccC-----------ccC-CCCccCc
Q 043893          305 NTTEPITDESYVAKFPKSMVEIVKRTIGGMSTPVKYLNITKLSQYR-----------VDA-HPTIYTK  360 (419)
Q Consensus       305 ~~T~P~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLdIT~ls~~R-----------~Dg-Hps~y~~  360 (419)
                       .+.+.... .....-.+++++++++.++  ..+.++|+...+..+           +|+ ||+.-|+
T Consensus       129 -~~~~~~~~-~~~~~~~~~~~~~~~~a~~--~~~~~id~~~~~~~~~~~~~~~~~~~~Dg~Hpn~~G~  192 (207)
T d3dc7a1         129 -GSFSAVTN-GLGYRQSDYEAAIAQMTAD--YGVPHLSLYRDAGMTFAIPAQAAIYSVDTLHPNNAGH  192 (207)
T ss_dssp             -TTBCSSCC-TTSCCHHHHHHHHHHHHHH--HTCCEEEHHHHSSCCTTSHHHHHHHBSSSSSBCHHHH
T ss_pred             -cchhhhhh-hHHHHHHHHHHHHHHHHHh--ceeeeeehhhhhhcccccccchhcCCCCCCCCCHHHH
Confidence             11111111 1111112355566665544  367788887655544           466 8776543



>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure