Citrus Sinensis ID: 043947

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDHFLTPECY
ccccccEEEEEEEccccccccEEEEEEEEcccccccccccEEEEEEccccccccEEEEEEEEccEEEEEEccEEEEEEEccccccccccccEEEEEEEccccccccccEEEEcccccccEEEEccEEEEEEccccccccccccccccccccccHHHHHHHHHHHcccEEEEcccccccccccccccc
ccccccEEEEEEccccccccEEEEEEEEEcccccccEEEcEEEEEEEEcccccccEEEEEEcccEEEEEEccccEEEEcccccccccccccEEEEEEcccccccccccEEEEccccccEEEEEEccccccEEcccccccccccccccccccccHHHHHHHHHHHHccEEEEcccccccccccccccc
hpgrhdevgieflgttfgkpytlqtnvyirgsgdgeiiGREMkfhlwfdptkdfhhyailwspkeliflvddvpirryprksaatfplrpmwvygsiwdasswatedgkykadyryqpfvarytdfkacgctayapawcrpvsvspfhsgglsrQQYWAMRWLQSHHLVYDYCrdqkrdhfltpecy
hpgrhdevgieflgttfgkpytlQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYprksaatfplrpmwvYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDHFLTPECY
HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDHFLTPECY
*******VGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDHF******
**GRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDHFLTPECY
HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDHFLTPECY
***RHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWC*******F*SGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDHFLTPECY
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDHFLTPECY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query187 2.2.26 [Sep-21-2011]
Q9SJL9299 Probable xyloglucan endot yes no 1.0 0.625 0.812 3e-91
P93046293 Probable xyloglucan endot no no 0.994 0.634 0.693 4e-71
Q38908343 Probable xyloglucan endot no no 0.951 0.518 0.455 7e-38
Q38911289 Probable xyloglucan endot no no 0.935 0.605 0.427 1e-37
Q8LG58291 Probable xyloglucan endot no no 0.946 0.608 0.414 2e-37
Q38909332 Probable xyloglucan endot no no 0.957 0.539 0.405 8e-37
P93349295 Probable xyloglucan endot N/A no 0.967 0.613 0.4 6e-36
Q8LC45310 Probable xyloglucan endot no no 0.978 0.590 0.383 8e-36
Q9FKL8284 Putative xyloglucan endot no no 0.893 0.588 0.422 2e-35
Q38907284 Probable xyloglucan endot no no 0.898 0.591 0.414 3e-35
>sp|Q9SJL9|XTH32_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1 Back     alignment and function desciption
 Score =  333 bits (855), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 152/187 (81%), Positives = 173/187 (92%)

Query: 1   HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAIL 60
           HPG HDEV IEFLGTTFGKPYTLQTNVYIRGSGDG+IIGREMKF LWFDPTKDFHHYAIL
Sbjct: 112 HPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAIL 171

Query: 61  WSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFV 120
           WSP+E+IFLVDD+PIRRYP+KSA+TFPLRPMW+YGSIWDASSWATEDGKYKADY+YQPF 
Sbjct: 172 WSPREIIFLVDDIPIRRYPKKSASTFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFT 231

Query: 121 ARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDH 180
           A+YT+FKA GCTAY+ A C P+S SP+ SGGL+RQQ+ AMRW+Q+H +VY+YC+D KRDH
Sbjct: 232 AKYTNFKALGCTAYSSARCYPLSASPYRSGGLTRQQHQAMRWVQTHSMVYNYCKDYKRDH 291

Query: 181 FLTPECY 187
            LTPEC+
Sbjct: 292 SLTPECW 298
Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 0EC: 7
>sp|P93046|XTH31_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2 Back     alignment and function description
>sp|Q38908|XTH30_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2 Back     alignment and function description
>sp|Q38911|XTH15_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1 Back     alignment and function description
>sp|Q8LG58|XTH16_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2 Back     alignment and function description
>sp|Q38909|XTH28_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1 Back     alignment and function description
>sp|P93349|XTH_TOBAC Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1 Back     alignment and function description
>sp|Q8LC45|XTH33_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2 Back     alignment and function description
>sp|Q9FKL8|XTH13_ARATH Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=3 SV=1 Back     alignment and function description
>sp|Q38907|XTH25_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query187
224068801 290 predicted protein [Populus trichocarpa] 0.994 0.641 0.870 1e-94
187372998 292 xyloglucan endotransglucosylase/hydrolas 1.0 0.640 0.871 1e-94
255556876 296 Xyloglucan endotransglucosylase/hydrolas 1.0 0.631 0.860 9e-94
224140259 294 predicted protein [Populus trichocarpa] 1.0 0.636 0.855 2e-93
363808198 293 uncharacterized protein LOC100796698 pre 1.0 0.638 0.850 2e-92
449501049 292 PREDICTED: probable xyloglucan endotrans 1.0 0.640 0.844 2e-92
449440139 292 PREDICTED: probable xyloglucan endotrans 1.0 0.640 0.844 2e-92
356572476 293 PREDICTED: probable xyloglucan endotrans 1.0 0.638 0.844 2e-91
356548260 296 PREDICTED: probable xyloglucan endotrans 1.0 0.631 0.828 3e-91
156739648 293 xyloglucan endotraglucosylase/hydrolase 1.0 0.638 0.839 3e-91
>gi|224068801|ref|XP_002326203.1| predicted protein [Populus trichocarpa] gi|222833396|gb|EEE71873.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  350 bits (898), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 162/186 (87%), Positives = 174/186 (93%)

Query: 1   HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAIL 60
           HPG HDEV IEFLGTTFGKPYTLQTNVYIRGSGDG IIGREMKFHLWFDPTK+FHHYAIL
Sbjct: 105 HPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGRIIGREMKFHLWFDPTKNFHHYAIL 164

Query: 61  WSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFV 120
           WSPKE+IFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATE+GKYKADYRYQPFV
Sbjct: 165 WSPKEIIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEEGKYKADYRYQPFV 224

Query: 121 ARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDH 180
           A YT+FKA GC+AY+PAWCRPVS SPF SGGL+RQQY  MRW+Q +H+VY+YC+D KRDH
Sbjct: 225 ASYTNFKAAGCSAYSPAWCRPVSASPFRSGGLTRQQYRTMRWVQRYHMVYNYCKDYKRDH 284

Query: 181 FLTPEC 186
            LTPEC
Sbjct: 285 SLTPEC 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|187372998|gb|ACD03233.1| xyloglucan endotransglucosylase/hydrolase 9 [Malus x domestica] Back     alignment and taxonomy information
>gi|255556876|ref|XP_002519471.1| Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis] gi|223541334|gb|EEF42885.1| Xyloglucan endotransglucosylase/hydrolase protein 14 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224140259|ref|XP_002323501.1| predicted protein [Populus trichocarpa] gi|222868131|gb|EEF05262.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|363808198|ref|NP_001241974.1| uncharacterized protein LOC100796698 precursor [Glycine max] gi|255634815|gb|ACU17768.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449501049|ref|XP_004161263.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449440139|ref|XP_004137842.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356572476|ref|XP_003554394.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32-like [Glycine max] Back     alignment and taxonomy information
>gi|356548260|ref|XP_003542521.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32-like [Glycine max] Back     alignment and taxonomy information
>gi|156739648|gb|ABU93485.1| xyloglucan endotraglucosylase/hydrolase [Vigna angularis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query187
TAIR|locus:2058006299 XTH32 "xyloglucan endotransglu 1.0 0.625 0.812 4.6e-89
TAIR|locus:2075919293 XTH31 "XYLOGLUCAN ENDOTRANSGLU 0.994 0.634 0.693 4.6e-73
TAIR|locus:2031750343 XTH30 "xyloglucan endotransglu 0.951 0.518 0.455 2.1e-38
TAIR|locus:2129445289 XTH15 "xyloglucan endotransglu 0.935 0.605 0.442 2.6e-38
TAIR|locus:2117189357 XTH29 "xyloglucan endotransglu 0.663 0.347 0.519 2.8e-38
TAIR|locus:2095168291 XTH16 "xyloglucan endotransglu 0.946 0.608 0.419 1.5e-37
TAIR|locus:2169990292 XTH6 "xyloglucan endotransgluc 0.935 0.599 0.420 4.9e-37
TAIR|locus:2006857332 XTH28 "xyloglucan endotransglu 0.951 0.536 0.407 1.3e-36
TAIR|locus:2137609293 XTH7 "xyloglucan endotransgluc 0.935 0.597 0.425 1.3e-36
TAIR|locus:2174582284 XTH13 "xyloglucan endotransglu 0.935 0.616 0.423 4.4e-36
TAIR|locus:2058006 XTH32 "xyloglucan endotransglucosylase/hydrolase 32" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 152/187 (81%), Positives = 173/187 (92%)

Query:     1 HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAIL 60
             HPG HDEV IEFLGTTFGKPYTLQTNVYIRGSGDG+IIGREMKF LWFDPTKDFHHYAIL
Sbjct:   112 HPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAIL 171

Query:    61 WSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFV 120
             WSP+E+IFLVDD+PIRRYP+KSA+TFPLRPMW+YGSIWDASSWATEDGKYKADY+YQPF 
Sbjct:   172 WSPREIIFLVDDIPIRRYPKKSASTFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFT 231

Query:   121 ARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDH 180
             A+YT+FKA GCTAY+ A C P+S SP+ SGGL+RQQ+ AMRW+Q+H +VY+YC+D KRDH
Sbjct:   232 AKYTNFKALGCTAYSSARCYPLSASPYRSGGLTRQQHQAMRWVQTHSMVYNYCKDYKRDH 291

Query:   181 FLTPECY 187
              LTPEC+
Sbjct:   292 SLTPECW 298
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IEA
GO:0016762 "xyloglucan:xyloglucosyl transferase activity" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=ISS
GO:0048046 "apoplast" evidence=IEA
GO:0042546 "cell wall biogenesis" evidence=RCA
GO:0016998 "cell wall macromolecule catabolic process" evidence=IMP
TAIR|locus:2075919 XTH31 "XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031750 XTH30 "xyloglucan endotransglucosylase/hydrolase 30" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129445 XTH15 "xyloglucan endotransglucosylase/hydrolase 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117189 XTH29 "xyloglucan endotransglucosylase/hydrolase 29" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095168 XTH16 "xyloglucan endotransglucosylase/hydrolase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169990 XTH6 "xyloglucan endotransglucosylase/hydrolase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006857 XTH28 "xyloglucan endotransglucosylase/hydrolase 28" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137609 XTH7 "xyloglucan endotransglucosylase/hydrolase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174582 XTH13 "xyloglucan endotransglucosylase/hydrolase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SJL9XTH32_ARATH2, ., 4, ., 1, ., 2, 0, 70.81281.00.6254yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query187
cd02176263 cd02176, GH16_XET, Xyloglucan endotransglycosylase 7e-82
PLN03161291 PLN03161, PLN03161, Probable xyloglucan endotransg 1e-47
pfam00722174 pfam00722, Glyco_hydro_16, Glycosyl hydrolases fam 1e-47
cd00413210 cd00413, Glyco_hydrolase_16, glycosyl hydrolase fa 5e-16
cd02175212 cd02175, GH16_lichenase, lichenase, member of glyc 2e-12
cd02183203 cd02183, GH16_fungal_CRH1_transglycosylase, glycos 4e-12
pfam0695551 pfam06955, XET_C, Xyloglucan endo-transglycosylase 8e-10
cd08023235 cd08023, GH16_laminarinase_like, Laminarinase, mem 2e-04
COG2273355 COG2273, SKN1, Beta-glucanase/Beta-glucan syntheta 0.003
>gnl|CDD|185685 cd02176, GH16_XET, Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
 Score =  242 bits (621), Expect = 7e-82
 Identities = 90/193 (46%), Positives = 112/193 (58%), Gaps = 13/193 (6%)

Query: 2   PGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILW 61
           P  HDE+  EFLG   G+PYTLQTNV+  G G     GRE + +LWFDPT DFH Y+ILW
Sbjct: 76  PDNHDEIDFEFLGNVTGQPYTLQTNVFANGVG-----GREQRIYLWFDPTADFHTYSILW 130

Query: 62  SPKELIFLVDDVPIRRYPRKSAATFP---LRPMWVYGSIWDASSWATEDGKYKADYRYQP 118
           +P +++F VDDVPIR +    A   P    +PM VY SIWD S WAT+ G+ K D+ Y P
Sbjct: 131 NPHQIVFYVDDVPIRVFKNNEALGVPYPSSQPMGVYASIWDGSDWATQGGRVKIDWSYAP 190

Query: 119 FVARYTDFKACGCTAYAPAWCRPVSVSP-----FHSGGLSRQQYWAMRWLQSHHLVYDYC 173
           FVA Y DFK  GC           S +           LS  Q  AM W++ +++VYDYC
Sbjct: 191 FVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSANQQRAMEWVRRNYMVYDYC 250

Query: 174 RDQKRDHFLTPEC 186
            D+KR     PEC
Sbjct: 251 DDRKRYPVPPPEC 263

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. Length = 263
>gnl|CDD|178706 PLN03161, PLN03161, Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>gnl|CDD|216081 pfam00722, Glyco_hydro_16, Glycosyl hydrolases family 16 Back     alignment and domain information
>gnl|CDD|185683 cd00413, Glyco_hydrolase_16, glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185684 cd02175, GH16_lichenase, lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|185692 cd02183, GH16_fungal_CRH1_transglycosylase, glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>gnl|CDD|219239 pfam06955, XET_C, Xyloglucan endo-transglycosylase (XET) C-terminus Back     alignment and domain information
>gnl|CDD|185693 cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>gnl|CDD|225182 COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 187
cd02176263 GH16_XET Xyloglucan endotransglycosylase, member o 100.0
PLN03161291 Probable xyloglucan endotransglucosylase/hydrolase 100.0
cd02183203 GH16_fungal_CRH1_transglycosylase glycosylphosphat 100.0
cd02175212 GH16_lichenase lichenase, member of glycosyl hydro 99.94
PF00722185 Glyco_hydro_16: Glycosyl hydrolases family 16; Int 99.89
cd00413210 Glyco_hydrolase_16 glycosyl hydrolase family 16. T 99.88
cd02178258 GH16_beta_agarase Beta-agarase, member of glycosyl 99.88
cd08023235 GH16_laminarinase_like Laminarinase, member of the 99.87
PF0695551 XET_C: Xyloglucan endo-transglycosylase (XET) C-te 99.8
cd02182259 GH16_Strep_laminarinase_like Streptomyces laminari 99.78
cd02177269 GH16_kappa_carrageenase Kappa-carrageenase, member 99.77
cd02180295 GH16_fungal_KRE6_glucanase Saccharomyces cerevisia 99.75
cd08024330 GH16_CCF Coelomic cytolytic factor, member of glyc 99.72
cd02179321 GH16_beta_GRP beta-1,3-glucan recognition protein, 99.66
COG2273355 SKN1 Beta-glucanase/Beta-glucan synthetase [Carboh 99.66
PF03935504 SKN1: Beta-glucan synthesis-associated protein (SK 98.79
cd02181293 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D- 96.21
PF09264198 Sial-lect-inser: Vibrio cholerae sialidase, lectin 93.94
PF13385157 Laminin_G_3: Concanavalin A-like lectin/glucanases 88.43
cd00152201 PTX Pentraxins are plasma proteins characterized b 83.29
PF06439185 DUF1080: Domain of Unknown Function (DUF1080); Int 82.74
smart00159206 PTX Pentraxin / C-reactive protein / pentaxin fami 80.91
cd00110151 LamG Laminin G domain; Laminin G-like domains are 80.06
>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16 Back     alignment and domain information 
Probab=100.00  E-value=6.7e-65  Score=432.83  Aligned_cols=178  Identities=49%  Similarity=0.954  Sum_probs=161.6

Q ss_pred             CCCeEeEEEeCccCCCCeEEEeeeEECCCCCCcccceeeeEeecCCCCCCcEEEEEEeccCeeEEEECCEEEEEeeCCCC
Q 043947            4 RHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKSA   83 (187)
Q Consensus         4 ~~dEIDiE~lG~~~~~p~~vqtnv~~~G~~~~~~~g~~~~~~l~fd~s~dfH~Y~i~Wtp~~I~fyVDg~~vr~~~~~~~   83 (187)
                      .+|||||||||+.+++|+++|||+|.+|.++     +++++.++|||+++||+|+|+|+|++|+|||||++||++++.+.
T Consensus        78 ~~~EID~E~lGn~~g~~~~~qtnv~~~g~g~-----r~~~~~l~fdpt~dFHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~  152 (263)
T cd02176          78 NHDEIDFEFLGNVTGQPYTLQTNVFANGVGG-----REQRIYLWFDPTADFHTYSILWNPHQIVFYVDDVPIRVFKNNEA  152 (263)
T ss_pred             CCCeEEEEEecccCCCceEEEEEEeCCCCCC-----CceeeecCCCCCCCeEEEEEEEccceEEEEECCEEEEEEecccc
Confidence            4999999999999999999999999988765     77889999999999999999999999999999999999998654


Q ss_pred             --CCCCC-CcceEEEeeeeccccCcCCCccccCCCCCCeEEEEeEEEEEeeecCCC-CcCCCCC-CCCCC---CCCCCHH
Q 043947           84 --ATFPL-RPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAP-AWCRPVS-VSPFH---SGGLSRQ  155 (187)
Q Consensus        84 --~~~P~-~Pm~l~lniW~gg~Wat~gG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~-~~c~~~~-~~~~~---~~~l~~~  155 (187)
                        .+||+ +||+|++|||+||+|||+||++++||+++||+|+|++|.|.+|.+.+. ..|.... ..+|.   +++|+++
T Consensus       153 ~g~~~P~~~Pm~l~~niW~g~~WAt~gG~~~~d~~~aPf~a~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  232 (263)
T cd02176         153 LGVPYPSSQPMGVYASIWDGSDWATQGGRVKIDWSYAPFVASYRDFKLDGCVVDPGDSFSSCSCTEDWWNGSTYQQLSAN  232 (263)
T ss_pred             cCCCCCccceEEEEEeeEcCCCcccCCCcccccCCCCCeeEEEeeEEEeeeecCCCCccccCCCccccccccccccCCHH
Confidence              68999 999999999999999999999999999999999999999999997654 4565432 22222   4789999


Q ss_pred             HHHHHHHHHhCCeEEecccCCCCCCCCCCCC
Q 043947          156 QYWAMRWLQSHHLVYDYCRDQKRDHFLTPEC  186 (187)
Q Consensus       156 ~~~~~~~v~~~~m~YdYC~D~~R~~~~p~EC  186 (187)
                      |+++|+|||+||||||||+|++|||.+||||
T Consensus       233 ~~~~~~~~~~~~~~y~yC~d~~r~~~~p~ec  263 (263)
T cd02176         233 QQRAMEWVRRNYMVYDYCDDRKRYPVPPPEC  263 (263)
T ss_pred             HHHHHHHHHHCCEEEecCCCCCcCCCCcCCC
Confidence            9999999999999999999999999999999

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling.
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional Back     alignment and domain information
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase Back     alignment and domain information
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16 Back     alignment and domain information
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16 Back     alignment and domain information
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET) Back     alignment and domain information
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16 Back     alignment and domain information
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16 Back     alignment and domain information
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1 Back     alignment and domain information
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A Back     alignment and domain information
>PF09264 Sial-lect-inser: Vibrio cholerae sialidase, lectin insertion; InterPro: IPR015344 This domain is predominantly found in Vibrio cholerae sialidase, and adopt a beta sandwich structure consisting of 12-14 strands arranged in two beta-sheets Back     alignment and domain information
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A Back     alignment and domain information
>cd00152 PTX Pentraxins are plasma proteins characterized by their pentameric discoid assembly and their Ca2+ dependent ligand binding, such as Serum amyloid P component (SAP) and C-reactive Protein (CRP), which are cytokine-inducible acute-phase proteins implicated in innate immunity Back     alignment and domain information
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function Back     alignment and domain information
>smart00159 PTX Pentraxin / C-reactive protein / pentaxin family Back     alignment and domain information
>cd00110 LamG Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query187
2uwa_A274 Crystal Structure Of The Nasturtium Seedling Xylogl 7e-78
2uwc_A271 Crystal Structure Of Nasturtium Xyloglucan Hydrolas 8e-78
2uwb_A267 Crystal Structure Of The Nasturtium Seedling Mutant 1e-74
2vh9_A290 Crystal Structure Of Nxg1-Deltayniig In Complex Wit 1e-74
1umz_A278 Xyloglucan Endotransglycosylase In Complex With The 5e-35
1ajk_A214 Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Gluc 6e-06
1byh_A214 Molecular And Active-Site Structure Of A Bacillus ( 6e-06
1cpm_A214 Native-Like In Vivo Folding Of A Circularly Permute 6e-06
1axk_A 394 Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Le 6e-06
1mac_A212 Crystal Structure And Site-Directed Mutagenesis Of 6e-06
1cpn_A208 Native-Like In Vivo Folding Of A Circularly Permute 7e-06
3i4i_A234 Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glu 8e-06
1u0a_A214 Crystal Structure Of The Engineered Beta-1,3-1,4-En 3e-05
3d6e_A201 Crystal Structure Of The Engineered 1,3-1,4-Beta-Gl 5e-05
1gbg_A214 Bacillus Licheniformis Beta-Glucanase Length = 214 2e-04
3o5s_A238 Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanas 2e-04
>pdb|2UWA|A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 Length = 274 Back     alignment and structure 
Iteration: 1

 Score =  286 bits (731), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 131/186 (70%), Positives = 153/186 (82%), Gaps = 2/186 (1%)
Query: 1   HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAIL 60
           +PG+HDE+ IEFLGT  GKPYTLQTNV+I GSGD  IIGREM+ HLWFDPT+D+H+YAI 
Sbjct: 91  YPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGREMRIHLWFDPTQDYHNYAIY 150
Query: 61  WSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFV 120
           W+P E+IF VDDVPIRRYPRKS ATFPLRP+WVYGS+WDASSWATE+GKYKADYRYQPFV
Sbjct: 151 WTPSEIIFFVDDVPIRRYPRKSDATFPLRPLWVYGSVWDASSWATENGKYKADYRYQPFV 210
Query: 121 ARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDH 180
            +Y DFK   CT  A + C P SVSP+  G LS+QQ  AM W+Q +++VY+YC D  RDH
Sbjct: 211 GKYEDFKLGSCTVEAASSCNPASVSPY--GQLSQQQVAAMEWVQKNYMVYNYCDDPTRDH 268
Query: 181 FLTPEC 186
            LTPEC
Sbjct: 269 TLTPEC 274
>pdb|2UWC|A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 Length = 271 Back     alignment and structure
>pdb|2UWB|A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig Length = 267 Back     alignment and structure
>pdb|2VH9|A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide Length = 290 Back     alignment and structure
>pdb|1UMZ|A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. Length = 278 Back     alignment and structure
>pdb|1AJK|A Chain A, Circularly Permuted (1-3,1-4)-Beta-D-Glucan 4- Glucanohydrolase Cpa16m-84 Length = 214 Back     alignment and structure
>pdb|1BYH|A Chain A, Molecular And Active-Site Structure Of A Bacillus (1-3,1-4)- Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|1CPM|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 214 Back     alignment and structure
>pdb|1AXK|A Chain A, Engineered Bacillus Bifunctional Enzyme Gluxyn-1 Length = 394 Back     alignment and structure
>pdb|1MAC|A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase Length = 212 Back     alignment and structure
>pdb|1CPN|A Chain A, Native-Like In Vivo Folding Of A Circularly Permuted Jellyroll Protein Shown By Crystal Structure Analysis Length = 208 Back     alignment and structure
>pdb|3I4I|A Chain A, Crystal Structure Of A Prokaryotic Beta-1,3-1,4-Glucanase (Lichenase) Derived From A Mouse Hindgut Metagenome Length = 234 Back     alignment and structure
>pdb|1U0A|A Chain A, Crystal Structure Of The Engineered Beta-1,3-1,4-Endoglucanase H(A16- M) In Complex With Beta-Glucan Tetrasaccharide Length = 214 Back     alignment and structure
>pdb|3D6E|A Chain A, Crystal Structure Of The Engineered 1,3-1,4-Beta-Glucanase Protein From Bacillus Licheniformis Length = 201 Back     alignment and structure
>pdb|1GBG|A Chain A, Bacillus Licheniformis Beta-Glucanase Length = 214 Back     alignment and structure
>pdb|3O5S|A Chain A, Crystal Structure Of The Endo-Beta-1,3-1,4 Glucanase From Bacillus Subtilis (Strain 168) Length = 238 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query187
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 6e-66
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 5e-57
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 4e-39
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 6e-36
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 7e-36
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 4e-33
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1e-30
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 2e-30
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 2e-22
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 2e-21
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 5e-05
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 1e-04
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 4e-04
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 5e-04
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 6e-04
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 8e-04
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 8e-04
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Length = 274 Back     alignment and structure
 Score =  202 bits (515), Expect = 6e-66
 Identities = 131/186 (70%), Positives = 153/186 (82%), Gaps = 2/186 (1%)

Query: 1   HPGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAIL 60
           +PG+HDE+ IEFLGT  GKPYTLQTNV+I GSGD  IIGREM+ HLWFDPT+D+H+YAI 
Sbjct: 91  YPGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGREMRIHLWFDPTQDYHNYAIY 150

Query: 61  WSPKELIFLVDDVPIRRYPRKSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFV 120
           W+P E+IF VDDVPIRRYPRKS ATFPLRP+WVYGS+WDASSWATE+GKYKADYRYQPFV
Sbjct: 151 WTPSEIIFFVDDVPIRRYPRKSDATFPLRPLWVYGSVWDASSWATENGKYKADYRYQPFV 210

Query: 121 ARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMRWLQSHHLVYDYCRDQKRDH 180
            +Y DFK   CT  A + C P SVSP+  G LS+QQ  AM W+Q +++VY+YC D  RDH
Sbjct: 211 GKYEDFKLGSCTVEAASSCNPASVSPY--GQLSQQQVAAMEWVQKNYMVYNYCDDPTRDH 268

Query: 181 FLTPEC 186
            LTPEC
Sbjct: 269 TLTPEC 274
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Length = 278 Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Length = 208 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Length = 238 Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Length = 214 Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Length = 234 Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Length = 394 Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Length = 240 Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Length = 214 Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Length = 271 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Length = 420 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Length = 245 Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Length = 272 Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Length = 264 Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Length = 251 Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query187
2uwa_A274 Cellulase; glycoside hydrolase, xyloglucan-endo-tr 100.0
1umz_A278 Xyloglucan endotransglycosylase; glycoside hydrola 100.0
3i4i_A234 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 99.97
1ajk_A214 CPA16M-84, circularly permuted (1-3,1-4)-beta-D-gl 99.97
3o5s_A238 Beta-glucanase; glycosyl hydrolase, beta-jelly rol 99.96
3h0o_A240 Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI st 99.95
1cpn_A208 Circularly permuted; hydrolase(glucanase); 1.80A { 99.95
2ayh_A214 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolas 99.95
3iln_A251 Laminarinase; jelly ROW, hydrolase, family 16 glyc 99.94
1axk_A 394 Gluxyn-1; bifunctional, fusion protein, 1,4-beta-x 99.94
2hyk_A245 Beta-1,3-glucanase; family 16, beta-jelly roll, ba 99.92
2vy0_A264 Endo-beta-1,3-glucanase; hydrolase, laminarin, end 99.91
4ate_A266 Beta-porphyranase A; hydrolase, AGAR degradation; 99.91
3azy_A272 Laminarinase; beta-jelly roll fold, glycosyl hydro 99.91
3juu_A280 Porphyranase B; glycoside hydrolase family GH16, b 99.9
4awd_A324 Beta-porphyranase; hydrolase; 2.40A {Bacteroides p 99.89
1o4y_A288 Beta-agarase A; glycoside hydrolase family 16, aga 99.89
3rq0_A269 Glycosyl hydrolases family protein 16; structural 99.89
1dyp_A271 Kappa-carrageenase; hydrolase, kappa-carrageenan d 99.87
3dgt_A280 Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50 99.87
1o4z_A346 Beta-agarase B; glycoside hydrolase family 16, aga 99.86
4atf_A308 Beta-agarase B; hydrolase, polysaccharidase, agaro 99.85
1ajo_A214 CPA16M-127, circularly permuted (1-3,1-4)-beta-D-g 99.85
1ups_A420 Glcnac-alpha-1,4-GAL-releasing endo-beta- galactos 99.83
4asm_B363 Beta-agarase D; hydrolase, glycoside hydrolase, en 99.6
2w39_A298 Putative laminarinase; hydrolase, white ROT fungus 99.43
3flp_A217 SAP-like pentraxin; physiological doubly-stacked h 82.54
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A* Back     alignment and structure
Probab=100.00  E-value=6.3e-61  Score=409.74  Aligned_cols=183  Identities=70%  Similarity=1.298  Sum_probs=165.6

Q ss_pred             CCCCCeEeEEEeCccCCCCeEEEeeeEECCCCCCcccceeeeEeecCCCCCCcEEEEEEeccCeeEEEECCEEEEEeeCC
Q 043947            2 PGRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRK   81 (187)
Q Consensus         2 ~~~~dEIDiE~lG~~~~~p~~vqtnv~~~G~~~~~~~g~~~~~~l~fd~s~dfH~Y~i~Wtp~~I~fyVDg~~vr~~~~~   81 (187)
                      ++.+||||||+||+++++++++|||+|.+|.++....++++++.+++|++++||+|+|+|+|++|+|||||++||++++.
T Consensus        92 ~~~~gEIDIE~lG~~~~~~~~v~tn~~~~g~~~~~~~~~~~~~~l~~d~~~~FHtY~ieWtp~~I~fyVDG~~v~t~~~~  171 (274)
T 2uwa_A           92 PGKHDEIDIEFLGTIPGKPYTLQTNVFIEGSGDYNIIGREMRIHLWFDPTQDYHNYAIYWTPSEIIFFVDDVPIRRYPRK  171 (274)
T ss_dssp             TTSCCEEEEEEECCCTTSCCEEEEEEECTTTTTSSCCCCCEEECCSSCTTSSCEEEEEEECSSEEEEEETTEEEEEEECC
T ss_pred             CCcCCeEEEEEeCCCCCCceEEEEEEeCCCCCCccccCcceEEeCCCCCCCCcEEEEEEEecCeEEEEECCeEEEEEECC
Confidence            45899999999999988889999999998876543345778899999999999999999999999999999999999986


Q ss_pred             CCCCCCCCcceEEEeeeeccccCcCCCccccCCCCCCeEEEEeEEEEEeeecCCCCcCCCCCCCCCCCCCCCHHHHHHHH
Q 043947           82 SAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAPAWCRPVSVSPFHSGGLSRQQYWAMR  161 (187)
Q Consensus        82 ~~~~~P~~Pm~l~lniW~gg~Wat~gG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~~~c~~~~~~~~~~~~l~~~~~~~~~  161 (187)
                      +...||.+||+|+||||+||+||++||++++||+.+||+|+|++|+|.+|.++....|.....  ..++.|+..|+++|+
T Consensus       172 ~~~~~P~~P~~l~lnlw~Gg~Wa~~gG~~~~d~~~~P~~~~v~~v~v~~c~~~~~~~c~~~~~--~~~~~l~~~~~~~~~  249 (274)
T 2uwa_A          172 SDATFPLRPLWVYGSVWDASSWATENGKYKADYRYQPFVGKYEDFKLGSCTVEAASSCNPASV--SPYGQLSQQQVAAME  249 (274)
T ss_dssp             CGGGSCCSCEEEEEEEEECTTTTBGGGTBCCCGGGCCEEEEEEEEEEEEEETTSCTTCCCCCS--SSSSSCCHHHHHHHH
T ss_pred             cCCCCCCCCEEEEEEEEeCCCCccCCCcccccCCCCCEEEEEEEEEEEeccCCCcccccccCc--CccccCCHHHHHHHH
Confidence            657899999999999999999999999999999999999999999999999876667975432  234789999999999


Q ss_pred             HHHhCCeEEecccCCCCCCCCCCCC
Q 043947          162 WLQSHHLVYDYCRDQKRDHFLTPEC  186 (187)
Q Consensus       162 ~v~~~~m~YdYC~D~~R~~~~p~EC  186 (187)
                      |||+||||||||+|++|||++|+||
T Consensus       250 ~~~~~~~~y~yc~d~~r~~~~~~ec  274 (274)
T 2uwa_A          250 WVQKNYMVYNYCDDPTRDHTLTPEC  274 (274)
T ss_dssp             HHHHHHEEEEGGGCTTSCGGGCTTC
T ss_pred             HHHhCCEEcccCCCCCcCCCCCCCC
Confidence            9999999999999999999999999
>1umz_A Xyloglucan endotransglycosylase; glycoside hydrolase, XET, XTH, XEH, transglycosylation, transferase, glycosyltransferase; HET: NAG BMA BGC GAL; 1.8A {Populus tremula} SCOP: b.29.1.2 PDB: 1un1_A* Back     alignment and structure
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid} Back     alignment and structure
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A Back     alignment and structure
>3h0o_A Beta-glucanase; 1,3-1,4-beta-D-glucanase, CH-PI stacking interactions, TRIS inhibition, hydrolase, glycosidase; 1.40A {Fibrobacter succinogenes} SCOP: b.29.1.2 PDB: 1mve_A 1zm1_A* 2r4a_A 3hr9_A 2r49_A 3axd_A 3axe_A* Back     alignment and structure
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A Back     alignment and structure
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A Back     alignment and structure
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus} Back     alignment and structure
>1axk_A Gluxyn-1; bifunctional, fusion protein, 1,4-beta-xylanase, 1,3-1,4-beta-glucanase, hybrid enzyme; 2.10A {Bacillus subtilis} SCOP: b.29.1.2 b.29.1.11 Back     alignment and structure
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A Back     alignment and structure
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus} Back     alignment and structure
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A* Back     alignment and structure
>3azy_A Laminarinase; beta-jelly roll fold, glycosyl hydrolase family 16, laminari endo-1,3-beta-glucanase, hydrolase; 1.65A {Thermotoga maritima} PDB: 3azx_A 3azz_A* 3b00_A* 3b01_A 4dfs_A Back     alignment and structure
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans} Back     alignment and structure
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius} Back     alignment and structure
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A* Back     alignment and structure
>3rq0_A Glycosyl hydrolases family protein 16; structural genomics, PSI-biology; HET: PG4 211; 2.02A {Mycobacterium smegmatis} Back     alignment and structure
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2 Back     alignment and structure
>3dgt_A Endo-1,3-beta-glucanase; GHF16, hydrolase, 1; 1.50A {Streptomyces sioyaensis} Back     alignment and structure
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2 Back     alignment and structure
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans} Back     alignment and structure
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2 Back     alignment and structure
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3 Back     alignment and structure
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans} Back     alignment and structure
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A* Back     alignment and structure
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 187
d1umza_267 b.29.1.2 (A:) Xyloglucan endotransglycosylase {Eur 1e-53
d1ajka_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bac 5e-29
d2ayha_214 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {syn 5e-09
d1mvea_243 b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fib 2e-06
d1dypa_271 b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseud 2e-04
d1upsa1266 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing 7e-04
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Length = 267 Back     information, alignment and structure

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

 Score =  169 bits (430), Expect = 1e-53
 Identities = 75/189 (39%), Positives = 104/189 (55%), Gaps = 12/189 (6%)

Query: 5   HDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPK 64
           HDE+  EFLG   G+PY LQTNV+  G GD     RE + +LWFDPTK+FH+Y++LW+  
Sbjct: 78  HDEIDFEFLGNRTGQPYILQTNVFTGGKGD-----REQRIYLWFDPTKEFHYYSVLWNMY 132

Query: 65  ELIFLVDDVPIRRYPR---KSAATFPLRPMWVYGSIWDASSWATEDGKYKADYRYQPFVA 121
            ++FLVDDVPIR +             +PM +Y S+W+A  WAT  G  K D+   PF+A
Sbjct: 133 MIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIA 192

Query: 122 RYTDFKACGCTAYAPA-WCRPVSVSPFHS---GGLSRQQYWAMRWLQSHHLVYDYCRDQK 177
            Y  F   GC A   A +C       +       L   QY  + W++  + +Y+YC D+ 
Sbjct: 193 SYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAFQYRRLSWVRQKYTIYNYCTDRS 252

Query: 178 RDHFLTPEC 186
           R   + PEC
Sbjct: 253 RYPSMPPEC 261
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Length = 214 Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Length = 214 Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Length = 243 Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Length = 271 Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Length = 266 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query187
d1umza_267 Xyloglucan endotransglycosylase {European aspen (P 100.0
d1ajka_214 Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans 100.0
d1mvea_243 Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succi 99.91
d2ayha_214 Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid 99.87
d1upsa1266 GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi 99.81
d1o4ya_270 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.78
d1o4za_295 beta-Agarase A {Zobellia galactanivorans [TaxId: 6 99.72
d1dypa_271 kappa-Carrageenase, catalytic {Pseudoalteromonas c 99.71
d1epwa1218 Botulinum neurotoxin {Clostridium botulinum, serot 94.21
d1oq1a_223 Hypothetical protein YesU {Bacillus subtilis [TaxI 93.15
d1w0pa1192 Vibrio cholerae sialidase, N-terminal and insertio 92.62
d1saca_204 Serum amyloid P component (SAP) {Human (Homo sapie 91.17
d1a8da1247 Tetanus neurotoxin {Clostridium tetani [TaxId: 151 91.14
d1w0pa2197 Vibrio cholerae sialidase, N-terminal and insertio 90.67
d3btaa1207 Botulinum neurotoxin {Clostridium botulinum, serot 88.57
d2slia1196 Leech intramolecular trans-sialidase, N-terminal d 88.12
d1b09a_206 C-reactive protein (CRP) {Human (Homo sapiens) [Ta 87.92
>d1umza_ b.29.1.2 (A:) Xyloglucan endotransglycosylase {European aspen (Populus tremula) [TaxId: 113636]} Back     information, alignment and structure
class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Glycosyl hydrolases family 16
domain: Xyloglucan endotransglycosylase
species: European aspen (Populus tremula) [TaxId: 113636]

Probab=100.00  E-value=5e-63  Score=419.44  Aligned_cols=180  Identities=42%  Similarity=0.872  Sum_probs=163.1

Q ss_pred             CCCCeEeEEEeCccCCCCeEEEeeeEECCCCCCcccceeeeEeecCCCCCCcEEEEEEeccCeeEEEECCEEEEEeeCCC
Q 043947            3 GRHDEVGIEFLGTTFGKPYTLQTNVYIRGSGDGEIIGREMKFHLWFDPTKDFHHYAILWSPKELIFLVDDVPIRRYPRKS   82 (187)
Q Consensus         3 ~~~dEIDiE~lG~~~~~p~~vqtnv~~~G~~~~~~~g~~~~~~l~fd~s~dfH~Y~i~Wtp~~I~fyVDg~~vr~~~~~~   82 (187)
                      +.+||||||+||+..++++++|||+|.+|.++     +++++.++|||+++||+|+|+|+|++|+|||||++||++++.+
T Consensus        76 ~~~dEIDiE~lG~~~~~~~~v~tn~~~~g~g~-----~~~~~~~~~d~s~dFHtY~i~Wtp~~I~fyVDG~~vr~~~n~~  150 (267)
T d1umza_          76 SEHDEIDFEFLGNRTGQPYILQTNVFTGGKGD-----REQRIYLWFDPTKEFHYYSVLWNMYMIVFLVDDVPIRVFKNCK  150 (267)
T ss_dssp             SSCCEEEEEEECCSTTSCCEEEEEEEBTTBCC-----CCEEECCSSCTTTSCEEEEEEECSSEEEEEETTEEEEEEECCG
T ss_pred             CCCCeEEEEEecccCCcccEEEeeEeCCCCCC-----cceeEecCCCCccCcEEEEEEECcceEEEEECCEEEEEEeccc
Confidence            36899999999999999999999999998876     7788999999999999999999999999999999999999876


Q ss_pred             C--CCCCC-CcceEEEeeeeccccCcCCCccccCCCCCCeEEEEeEEEEEeeecCCC-CcCCCCCCCC---CCCCCCCHH
Q 043947           83 A--ATFPL-RPMWVYGSIWDASSWATEDGKYKADYRYQPFVARYTDFKACGCTAYAP-AWCRPVSVSP---FHSGGLSRQ  155 (187)
Q Consensus        83 ~--~~~P~-~Pm~l~lniW~gg~Wat~gG~~~~d~~~~Pf~a~~~~~~v~~c~~~~~-~~c~~~~~~~---~~~~~l~~~  155 (187)
                      .  .+||. +||+|++|||+||+|||+||++++||+.+||+|+|++|.|+||.++.. ..|......+   ...+.|+.+
T Consensus       151 ~~g~~~p~~~pm~i~~niW~g~~Wat~gG~~~~d~~~aPf~a~~~~~~v~~c~~~~~~~~~~~~~~~~~~~~~~~~l~~~  230 (267)
T d1umza_         151 DLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYRSFHIDGCEASVEAKFCATQGARWWDQKEFQDLDAF  230 (267)
T ss_dssp             GGTCCCSCSSCBEEEEEEEECTTTSSGGGTSCCCGGGCCEEEEEEEEEEEEEECCSSSCCCTTTTCSGGGSGGGSSCCHH
T ss_pred             cCCCCCCcceEEEEEEeeeeCCCccccCCeeeecCCCCCEEEEEEEEEEEecccCCCCcccCCCCCccccccccccCCHH
Confidence            5  67886 999999999999999999999999999999999999999999988765 4454333322   335789999


Q ss_pred             HHHHHHHHHhCCeEEecccCCCCCCCCCCCCC
Q 043947          156 QYWAMRWLQSHHLVYDYCRDQKRDHFLTPECY  187 (187)
Q Consensus       156 ~~~~~~~v~~~~m~YdYC~D~~R~~~~p~EC~  187 (187)
                      |+++|+|||+||||||||.|++|||++||||.
T Consensus       231 ~~~~~~~~~~~~~~y~yC~d~~r~~~~p~EC~  262 (267)
T d1umza_         231 QYRRLSWVRQKYTIYNYCTDRSRYPSMPPECK  262 (267)
T ss_dssp             HHHHHHHHHHHTEEEEGGGCTTTCSSCCTHHH
T ss_pred             HHHHHHHHHHCCcEEccCCCCCcCCCCCcccC
Confidence            99999999999999999999999999999993
>d1ajka_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Bacillus macerans [TaxId: 44252]} Back     information, alignment and structure
>d1mvea_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {Fibrobacter succinogenes [TaxId: 833]} Back     information, alignment and structure
>d2ayha_ b.29.1.2 (A:) Bacillus 1-3,1-4-beta-glucanase {synthetic, hybrid between Bacillus amyloliquefaciens and Bacillus macerans proteins} Back     information, alignment and structure
>d1upsa1 b.29.1.2 (A:19-284) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, catalytic domain {Clostridium perfringens [TaxId: 1502]} Back     information, alignment and structure
>d1o4ya_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1o4za_ b.29.1.2 (A:) beta-Agarase A {Zobellia galactanivorans [TaxId: 63186]} Back     information, alignment and structure
>d1dypa_ b.29.1.2 (A:) kappa-Carrageenase, catalytic {Pseudoalteromonas carrageenovora [TaxId: 227]} Back     information, alignment and structure
>d1epwa1 b.29.1.6 (A:862-1079) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]} Back     information, alignment and structure
>d1oq1a_ b.29.1.17 (A:) Hypothetical protein YesU {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1w0pa1 b.29.1.8 (A:25-216) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1saca_ b.29.1.5 (A:) Serum amyloid P component (SAP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a8da1 b.29.1.6 (A:1-247) Tetanus neurotoxin {Clostridium tetani [TaxId: 1513]} Back     information, alignment and structure
>d1w0pa2 b.29.1.8 (A:347-543) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d3btaa1 b.29.1.6 (A:872-1078) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]} Back     information, alignment and structure
>d2slia1 b.29.1.9 (A:81-276) Leech intramolecular trans-sialidase, N-terminal domain {North american leech (Macrobdella decora) [TaxId: 6405]} Back     information, alignment and structure
>d1b09a_ b.29.1.5 (A:) C-reactive protein (CRP) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure