Citrus Sinensis ID: 043984

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MANSLHHPRLPILQFLLLVFSSFIPRLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT
ccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccHHccHHHHccccccccccHHHHHHHHHHccccccccEEcccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHcccccccHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccccccccccccc
cccHHcHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHcccccccccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHcccccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccccccccccEEccccEEcc
manslhhprlpILQFLLLVFSSfiprlhasepyltldyyAKTCPTAFEIVRKEMEcavlsdprNAALIVRLHFHdcfvqgcdgsvlldDTIDLQGEKKASINRNALKGFRIIDRIKNkiesdcpgivsCADILTIAARDAIIlvggpywdvpvgrkdsktasyaladsnlpspdegLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRiygdyrvtsginplsETHLSVLKsicppigsdnnetamdyetpnlfdnSFYQILLQgegvlnsdqeMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVkmgnitnpesfvngevrkncrfvnt
manslhhprlPILQFLLLVFSSFIPRLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGekkasinrnalkgfriidriknkiesdcpgiVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITnpesfvngevrkncrfvnt
MANSLHHPRLPILQFLLLVFSSFIPRLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT
********RLPILQFLLLVFSSFIPRLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGR********************GLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNG***********
*************QFLLLVFSSFIPRLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICP**GSDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT
MANSLHHPRLPILQFLLLVFSSFIPRLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT
*****HHPRLPILQFLLLVFSSFIPRLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKA*INRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MANSLHHPRLPILQFLLLVFSSFIPRLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query338 2.2.26 [Sep-21-2011]
Q96519336 Peroxidase 11 OS=Arabidop yes no 0.973 0.979 0.677 1e-134
O23237331 Peroxidase 49 OS=Arabidop no no 0.926 0.945 0.457 1e-81
Q9SI16338 Peroxidase 15 OS=Arabidop no no 0.878 0.878 0.463 4e-80
Q9SI17337 Peroxidase 14 OS=Arabidop no no 0.881 0.884 0.465 2e-79
P22195316 Cationic peroxidase 1 OS= N/A no 0.928 0.993 0.439 2e-78
Q9FG34358 Peroxidase 54 OS=Arabidop no no 0.943 0.891 0.449 2e-78
A7NY33321 Peroxidase 4 OS=Vitis vin no no 0.881 0.928 0.459 5e-78
Q9SD46344 Peroxidase 36 OS=Arabidop no no 0.890 0.875 0.450 1e-77
Q96512346 Peroxidase 9 OS=Arabidops no no 0.881 0.861 0.47 1e-77
Q9FJZ9336 Peroxidase 72 OS=Arabidop no no 0.979 0.985 0.421 7e-77
>sp|Q96519|PER11_ARATH Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1 Back     alignment and function desciption
 Score =  478 bits (1231), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 227/335 (67%), Positives = 273/335 (81%), Gaps = 6/335 (1%)

Query: 10  LPILQFLLLVFSSFIPRLHASEPY----LTLDYYAKTCPTAFEIVRKEMECAVLSDPRNA 65
           + +L    +V + FIP      P     LTLDYY  TCPT F++++KEMEC V  DPRNA
Sbjct: 2   MRLLFVFFMVHTIFIPCFSFDTPGKDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNA 61

Query: 66  ALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPG 125
           A+I+RLHFHDCFVQGCDGSVLLD+T  LQGEKKAS N N+LKG++I+DRIKN IES+CPG
Sbjct: 62  AIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPG 121

Query: 126 IVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFH 185
           +VSCAD+LTI ARDA ILVGGPYWDVPVGRKDSKTASY LA +NLP+P+EGL+SII+KF+
Sbjct: 122 VVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFY 181

Query: 186 YQGLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIG- 244
            QGLSV DMVAL GAHTIG A+C N+R RIYGD++VTS +NP+SET+L+ L+ ICP    
Sbjct: 182 SQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSG 241

Query: 245 -SDNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALA 303
             D+N TA+D  TPNLFDNS Y  LL+GEG+LNSDQEMY+S+FGIQT+ +V+KYA D +A
Sbjct: 242 EGDSNVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVA 301

Query: 304 FFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT 338
           FF+QFS SMVKMGNI N ES  +GEVR+NCRFVNT
Sbjct: 302 FFEQFSKSMVKMGNILNSESLADGEVRRNCRFVNT 336
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description
>sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1 Back     alignment and function description
>sp|Q9SI17|PER14_ARATH Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=3 SV=1 Back     alignment and function description
>sp|P22195|PER1_ARAHY Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2 Back     alignment and function description
>sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1 Back     alignment and function description
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function description
>sp|Q9SD46|PER36_ARATH Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2 Back     alignment and function description
>sp|Q96512|PER9_ARATH Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1 Back     alignment and function description
>sp|Q9FJZ9|PER72_ARATH Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
224111802325 predicted protein [Populus trichocarpa] 0.952 0.990 0.778 1e-149
225425043339 PREDICTED: peroxidase 11 [Vitis vinifera 1.0 0.997 0.755 1e-145
297738237 626 unnamed protein product [Vitis vinifera] 0.923 0.498 0.792 1e-145
147801529316 hypothetical protein VITISV_043368 [Viti 0.923 0.987 0.785 1e-144
356495845337 PREDICTED: peroxidase 11-like [Glycine m 0.982 0.985 0.747 1e-141
224101619312 predicted protein [Populus trichocarpa] 0.902 0.977 0.777 1e-141
356499982337 PREDICTED: peroxidase 11-like [Glycine m 0.979 0.982 0.743 1e-139
449435272341 PREDICTED: peroxidase 11-like [Cucumis s 0.923 0.914 0.749 1e-137
297841611335 hypothetical protein ARALYDRAFT_476012 [ 0.973 0.982 0.680 1e-133
18409140336 peroxidase 11 [Arabidopsis thaliana] gi| 0.973 0.979 0.677 1e-132
>gi|224111802|ref|XP_002315983.1| predicted protein [Populus trichocarpa] gi|222865023|gb|EEF02154.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 253/325 (77%), Positives = 287/325 (88%), Gaps = 3/325 (0%)

Query: 17  LLVFSSFIP-RLHASEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHD 75
           +LVF S +   LHAS+P LTLD+YA TCP  FEIV+KEMEC VLSDPRNAALI+RLHFHD
Sbjct: 1   MLVFISILSGSLHASDPPLTLDHYASTCPDVFEIVKKEMECEVLSDPRNAALILRLHFHD 60

Query: 76  CFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTI 135
           CFVQGCDGSVLLDDTI LQGEK+A  N N+LKGF+IIDRIKNKIES+CPGIVSCADILTI
Sbjct: 61  CFVQGCDGSVLLDDTITLQGEKEALTNTNSLKGFKIIDRIKNKIESECPGIVSCADILTI 120

Query: 136 AARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMV 195
           AARDA+ILVGGPYWDVPVGRKDSKTAS+ LA SNLP+ DEGLLSI++KF YQGLS TD+V
Sbjct: 121 AARDAVILVGGPYWDVPVGRKDSKTASFELAASNLPTADEGLLSIMTKFLYQGLSATDLV 180

Query: 196 ALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIG--SDNNETAMD 253
           ALSGAHTIGMARC N+R RIYGD+  TS  +P+SET+L+ LKS CP  G   DNN +AMD
Sbjct: 181 ALSGAHTIGMARCANFRSRIYGDFETTSDASPMSETYLNSLKSTCPAAGGSGDNNISAMD 240

Query: 254 YETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMV 313
           Y TPNLFDNSFYQ+LL+G+G+L+SDQE+YSS+ GI+TK LV KYAHD+LAFFQQF+DSMV
Sbjct: 241 YATPNLFDNSFYQLLLKGDGLLSSDQELYSSMLGIETKNLVIKYAHDSLAFFQQFADSMV 300

Query: 314 KMGNITNPESFVNGEVRKNCRFVNT 338
           KMGNITNP+SFVNGEVR NCRFVNT
Sbjct: 301 KMGNITNPDSFVNGEVRTNCRFVNT 325

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225425043|ref|XP_002270660.1| PREDICTED: peroxidase 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738237|emb|CBI27438.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147801529|emb|CAN65777.1| hypothetical protein VITISV_043368 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356495845|ref|XP_003516782.1| PREDICTED: peroxidase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|224101619|ref|XP_002312356.1| predicted protein [Populus trichocarpa] gi|222852176|gb|EEE89723.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356499982|ref|XP_003518814.1| PREDICTED: peroxidase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|449435272|ref|XP_004135419.1| PREDICTED: peroxidase 11-like [Cucumis sativus] gi|449478616|ref|XP_004155370.1| PREDICTED: peroxidase 11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297841611|ref|XP_002888687.1| hypothetical protein ARALYDRAFT_476012 [Arabidopsis lyrata subsp. lyrata] gi|297334528|gb|EFH64946.1| hypothetical protein ARALYDRAFT_476012 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18409140|ref|NP_564948.1| peroxidase 11 [Arabidopsis thaliana] gi|25453204|sp|Q96519.1|PER11_ARATH RecName: Full=Peroxidase 11; Short=Atperox P11; AltName: Full=ATP23a/ATP23b; Flags: Precursor gi|12323216|gb|AAG51588.1|AC011665_9 peroxidase ATP23a [Arabidopsis thaliana] gi|12324132|gb|AAG52033.1|AC011914_3 peroxidase ATP23a; 12312-13683 [Arabidopsis thaliana] gi|1620371|emb|CAA70035.1| peroxidase ATP23a [Arabidopsis thaliana] gi|332196729|gb|AEE34850.1| peroxidase 11 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
TAIR|locus:2012428336 AT1G68850 [Arabidopsis thalian 0.967 0.973 0.681 5.1e-122
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.958 0.978 0.453 1.3e-75
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.881 0.861 0.47 5.7e-75
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.878 0.878 0.463 1.7e-73
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.881 0.884 0.465 1.2e-72
TAIR|locus:2170214358 AT5G06730 [Arabidopsis thalian 0.943 0.891 0.449 2.5e-72
TAIR|locus:2080928344 AT3G50990 [Arabidopsis thalian 0.890 0.875 0.450 8.6e-72
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.943 0.952 0.443 1.3e-70
TAIR|locus:2154925336 AT5G66390 [Arabidopsis thalian 0.979 0.985 0.421 1.6e-70
TAIR|locus:2161283316 AT5G58390 [Arabidopsis thalian 0.875 0.936 0.474 4.3e-70
TAIR|locus:2012428 AT1G68850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
 Identities = 227/333 (68%), Positives = 272/333 (81%)

Query:    12 ILQFLLLVFSSFIPRLHASEPY----LTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAAL 67
             +L    +V + FIP      P     LTLDYY  TCPT F++++KEMEC V  DPRNAA+
Sbjct:     4 LLFVFFMVHTIFIPCFSFDTPGKDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAI 63

Query:    68 IVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIIDRIKNKIESDCPGIV 127
             I+RLHFHDCFVQGCDGSVLLD+T  LQGEKKAS N N+LKG++I+DRIKN IES+CPG+V
Sbjct:    64 IIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVV 123

Query:   128 SCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQ 187
             SCAD+LTI ARDA ILVGGPYWDVPVGRKDSKTASY LA +NLP+P+EGL+SII+KF+ Q
Sbjct:   124 SCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQ 183

Query:   188 GLSVTDMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGS-- 245
             GLSV DMVAL GAHTIG A+C N+R RIYGD++VTS +NP+SET+L+ L+ ICP      
Sbjct:   184 GLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEG 243

Query:   246 DNNETAMDYETPNLFDNSFYQILLQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFF 305
             D+N TA+D  TPNLFDNS Y  LL+GEG+LNSDQEMY+S+FGIQT+ +V+KYA D +AFF
Sbjct:   244 DSNVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFF 303

Query:   306 QQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT 338
             +QFS SMVKMGNI N ES  +GEVR+NCRFVNT
Sbjct:   304 EQFSKSMVKMGNILNSESLADGEVRRNCRFVNT 336
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080928 AT3G50990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154925 AT5G66390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161283 AT5G58390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96519PER11_ARATH1, ., 1, 1, ., 1, ., 70.67760.97330.9791yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.991
3rd Layer1.11.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-148
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 1e-76
pfam00141180 pfam00141, peroxidase, Peroxidase 1e-66
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 1e-29
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-21
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 8e-13
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 1e-10
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 2e-09
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-05
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 3e-05
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  418 bits (1076), Expect = e-148
 Identities = 149/304 (49%), Positives = 203/304 (66%), Gaps = 8/304 (2%)

Query: 34  LTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDL 93
           L++ +Y+K+CP A  IVR  +  AV +DPR AA ++RLHFHDCFV+GCD SVLLD T + 
Sbjct: 2   LSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANN 61

Query: 94  QGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPV 153
             EK A  N + L+GF +ID IK  +E+ CPG+VSCADIL +AARDA++L GGP ++VP+
Sbjct: 62  TSEKDAPPNLS-LRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 154 GRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRK 213
           GR+D    S A    NLPSP   +  +IS F  +GL+VTD+VALSGAHTIG A C ++  
Sbjct: 121 GRRDG-RVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSD 179

Query: 214 RIYGDYRVTSGINP-LSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGE 272
           R+Y ++  T   +P L   + + L+  CP  G D+    +D  TPN FDNS+Y+ LL G 
Sbjct: 180 RLY-NFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238

Query: 273 GVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKN 332
           G+L SDQ + S     +T+ +VN+YA +  AFF+ F+ +MVKMGNI    +   GE+RKN
Sbjct: 239 GLLTSDQALLSD---PRTRAIVNRYAANQDAFFRDFAAAMVKMGNI-GVLTGSQGEIRKN 294

Query: 333 CRFV 336
           CR V
Sbjct: 295 CRVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 338
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.97
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.45
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.9e-107  Score=778.39  Aligned_cols=299  Identities=38%  Similarity=0.701  Sum_probs=284.1

Q ss_pred             CCCCCChhhhhcCCccHHHHHHHHHHHHHHcCCCchhhHHHHHhhcccccCCCCccccCCCCCcccccccccccccchhH
Q 043984           30 SEPYLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGF  109 (338)
Q Consensus        30 ~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~~~g~  109 (338)
                      ++++|+++||++|||++|+||+++|++++.+||+++|++|||+||||||+||||||||+++   .+||++++|. +++||
T Consensus        21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf   96 (324)
T PLN03030         21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGY   96 (324)
T ss_pred             hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchH
Confidence            4567999999999999999999999999999999999999999999999999999999865   3699999998 68999


Q ss_pred             HHHHHHHHHhhhcCCCccchHHHHHHHHHhHHHhhCCCcccccCCcCCCCcchhhcccCCCCCCCCCHHHHHHHHHHCCC
Q 043984          110 RIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGL  189 (338)
Q Consensus       110 ~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl  189 (338)
                      ++|+.||+++|++||++|||||||++||||||+++|||.|+|++||||+++|...++. +||+|+.++++|++.|+++||
T Consensus        97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl  175 (324)
T PLN03030         97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL  175 (324)
T ss_pred             HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999999999999999877775 899999999999999999999


Q ss_pred             ChhhhhhcccccccccccccccccccccCCCCC-CCCCCCCHHHHHHhhhcCCCCCCCCCCcCCCCCCCCccChHHHHHh
Q 043984          190 SVTDMVALSGAHTIGMARCVNYRKRIYGDYRVT-SGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQIL  268 (338)
Q Consensus       190 ~~~elVaLsGaHTiG~~hc~~f~~Rl~~~~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l  268 (338)
                      +.+|||+||||||||++||.+|.+|||||.+++ .+||+||+.|++.|++.||..++..+.+++|+.||.+|||+||+||
T Consensus       176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl  255 (324)
T PLN03030        176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL  255 (324)
T ss_pred             CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence            999999999999999999999999999999875 5899999999999999999643333468899999999999999999


Q ss_pred             hcCcccccchhhhhcCCcchhHHHHHHHhhhCH----HHHHHHHHHHHHHhhcCCCCCCCCCCeecccccCCC
Q 043984          269 LQGEGVLNSDQEMYSSIFGIQTKELVNKYAHDA----LAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVN  337 (338)
Q Consensus       269 ~~~~glL~SD~~L~~d~~~~~t~~~V~~yA~~~----~~F~~~Fa~Am~Km~~igvltG~~~GeIR~~C~~vn  337 (338)
                      ++++|+|+|||+|++|+   +|+++|++||.|+    +.|+++|++||+|||+|+|||| ++|||||+|+++|
T Consensus       256 l~~rGlL~SDq~L~~d~---~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG-~~GEIRk~C~~vN  324 (324)
T PLN03030        256 KNGRGILESDQKLWTDA---STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTG-TNGEIRKVCSAIN  324 (324)
T ss_pred             HhcCCCcCCchHhhcCc---cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCC-CCCceeccccccC
Confidence            99999999999999999   9999999999875    5999999999999999999999 9999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
1sch_A294 Peanut Peroxidase Length = 294 9e-79
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 7e-77
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 2e-74
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 3e-69
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 3e-69
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 6e-69
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-68
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 2e-68
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 2e-68
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-68
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 2e-68
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 3e-68
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 4e-68
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 7e-68
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 1e-67
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 1e-67
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 7e-67
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 3e-59
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 2e-51
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 6e-11
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 7e-11
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 8e-11
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 1e-10
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 2e-10
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 2e-10
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 3e-10
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 6e-10
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-09
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-09
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 2e-09
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 2e-09
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 7e-09
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 3e-06
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 9e-06
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 1e-05
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 1e-04
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 2e-04
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 7e-04
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 7e-04
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 8e-04
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure 
Iteration: 1

 Score =  290 bits (742), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 137/304 (45%), Positives = 203/304 (66%), Gaps = 11/304 (3%)
Query: 34  LTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDL 93
           L+ ++YA  CP A   ++  +  AV  + R  A ++RLHFHDCFVQGCD SVLLDDT + 
Sbjct: 2   LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 94  QGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPV 153
            GEK A  N N+++GF +ID IK+++ES CPG+VSCADIL +AARD+++ +GG  W+V +
Sbjct: 62  TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 154 GRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRK 213
           GR+DS TAS + A+S+LP+P   L  +IS F  +G +  ++V LSGAHTIG A+C  +R 
Sbjct: 122 GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRT 181
Query: 214 RIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEG 273
           RIY +    S I+P   T+   L++ CP +G D N +  D  TPN FDN++Y  L   +G
Sbjct: 182 RIYNE----SNIDP---TYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKG 234
Query: 274 VLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNC 333
           +L+SDQ++++   G+ T   V  Y+++A  F   F ++M+KMGN++ P +  +G++R NC
Sbjct: 235 LLHSDQQLFN---GVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLS-PLTGTSGQIRTNC 290
Query: 334 RFVN 337
           R  N
Sbjct: 291 RKTN 294
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-162
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-162
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-162
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-162
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-158
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-158
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-153
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 3e-87
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 5e-75
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 2e-68
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 2e-65
2e39_A344 Peroxidase; heme protein, coordination geometry of 5e-64
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 2e-62
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-60
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 5e-23
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 3e-15
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 7e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
 Score =  455 bits (1173), Expect = e-162
 Identities = 139/305 (45%), Positives = 200/305 (65%), Gaps = 4/305 (1%)

Query: 34  LTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDL 93
           L   +Y+ TCP A  IVR  ++ A+ SD R  A ++RLHFHDCFV GCD S+LLDDT  +
Sbjct: 3   LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSI 62

Query: 94  QGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPV 153
           Q EK A  N N+ +GF ++D IK  +E+ CPG+VSC+D+L +A+  ++ L GGP W V +
Sbjct: 63  QSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLL 122

Query: 154 GRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRK 213
           GR+DS TA+ A A+S++PSP E L +I  KF   GL+  D+VALSGAHT G ARC  +  
Sbjct: 123 GRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNN 182

Query: 214 RIYGDYRVTSGINP-LSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGE 272
           R++ ++  T   +P L+ T LS L+ +CP  GS +  T +D  TP+ FDN+++  L   +
Sbjct: 183 RLF-NFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSND 241

Query: 273 GVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKN 332
           G+L SDQE++S+     T  +V  +A +   FFQ F+ SM+ MGNI +P +  NGE+R +
Sbjct: 242 GLLQSDQELFSTTGS-STIAIVTSFASNQTLFFQAFAQSMINMGNI-SPLTGSNGEIRLD 299

Query: 333 CRFVN 337
           C+ VN
Sbjct: 300 CKKVN 304
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=7.9e-111  Score=801.09  Aligned_cols=301  Identities=36%  Similarity=0.630  Sum_probs=292.7

Q ss_pred             CChhhhhcCCccHHHHHHHHHHHHHHcCCCchhhHHHHHhhcccccCCCCccccCCCCCcccccccccccccchhHHHHH
Q 043984           34 LTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRIID  113 (338)
Q Consensus        34 L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~I~  113 (338)
                      |+++||++|||++|+|||++|++++.++|+++|++|||+||||||+||||||||++++++.+||++++|.++++||++|+
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999988899999999997789999999


Q ss_pred             HHHHHhhhcCCCccchHHHHHHHHHhHHHhhCCCcccccCCcCCCCcchhhcccCCCCCCCCCHHHHHHHHHHCCCChhh
Q 043984          114 RIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTD  193 (338)
Q Consensus       114 ~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e  193 (338)
                      .||++||++||++|||||||+||||+||+++|||.|+|++||||+++++..+++.+||+|+.++++|++.|++|||+++|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             hhhcccccccccccccccccccccCCCCCCCCCCCCHHHHHHhhhcCCCCCC--CCCCcCCCCCCCCccChHHHHHhhcC
Q 043984          194 MVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGS--DNNETAMDYETPNLFDNSFYQILLQG  271 (338)
Q Consensus       194 lVaLsGaHTiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~lD~~Tp~~FDN~Yy~~l~~~  271 (338)
                      |||||||||||++||.+|.+|||||+|++.+||+||+.|++.|+..||..++  +++.++||+.||.+|||+||+||+.+
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~~~  241 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT  241 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHHhC
Confidence            9999999999999999999999999999889999999999999999998665  67788999999999999999999999


Q ss_pred             cccccchhhhhcCCcchhHHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCCCCCCCeecccccCCCC
Q 043984          272 EGVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVNT  338 (338)
Q Consensus       272 ~glL~SD~~L~~d~~~~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~igvltG~~~GeIR~~C~~vn~  338 (338)
                      +|||+|||+|+.|+   +|+++|++||.|++.|+++|++||+||++|+|||| ++|||||+|++||+
T Consensus       242 ~glL~SDq~L~~d~---~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg-~~GeIR~~C~~~N~  304 (304)
T 3hdl_A          242 LGLLTSDQALVTEA---NLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTG-TQGEIRTNCSVVNS  304 (304)
T ss_dssp             CCCSHHHHGGGSSH---HHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCT-TSSBCCSBTTBCC-
T ss_pred             cCCCCCCHHHhcCc---cHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCC-CCCeeeCCccccCC
Confidence            99999999999999   99999999999999999999999999999999999 99999999999995
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 338
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-116
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-115
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-112
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-111
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-108
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-102
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 2e-62
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 1e-60
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 3e-59
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 2e-49
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 7e-48
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 6e-41
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 7e-04
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  337 bits (866), Expect = e-116
 Identities = 138/304 (45%), Positives = 190/304 (62%), Gaps = 2/304 (0%)

Query: 34  LTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDL 93
           LT  +Y +TCP  F IV   +  A  +DPR  A ++RLHFHDCFVQGCDGSVLL++T  +
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 94  QGEKKASINRNALKGFRIIDRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPV 153
           + E+ A  N N+++G  +++ IK  +E+ CP  VSCADIL IAA  A +L GGP W VP+
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPL 121

Query: 154 GRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVTDMVALSGAHTIGMARCVNYRK 213
           GR+DS TA+  LA+ NLP+P   L  + + F  QGL+  D+V LSG HT G ARC  +  
Sbjct: 122 GRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFIN 181

Query: 214 RIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGEG 273
           R+Y      +    L+ T+L VL++ CP   + +N T +D  TP+ FDN +Y  LLQ  G
Sbjct: 182 RLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNG 241

Query: 274 VLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNC 333
           +L SDQE++S+  G  T  +VN ++ +   FF  F  SM+KMGNI    +   GE+R  C
Sbjct: 242 LLQSDQELFST-PGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNI-GVLTGDEGEIRLQC 299

Query: 334 RFVN 337
            FVN
Sbjct: 300 NFVN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2.5e-105  Score=763.72  Aligned_cols=303  Identities=46%  Similarity=0.764  Sum_probs=294.2

Q ss_pred             CCChhhhhcCCccHHHHHHHHHHHHHHcCCCchhhHHHHHhhcccccCCCCccccCCCCCcccccccccccccchhHHHH
Q 043984           33 YLTLDYYAKTCPTAFEIVRKEMECAVLSDPRNAALIVRLHFHDCFVQGCDGSVLLDDTIDLQGEKKASINRNALKGFRII  112 (338)
Q Consensus        33 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~I  112 (338)
                      ||+.+||++|||++|+||+++|++++.+||+++|++|||+||||||+||||||||+++.++.+|+++++|.++++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            79999999999999999999999999999999999999999999999999999999998889999999999888999999


Q ss_pred             HHHHHHhhhcCCCccchHHHHHHHHHhHHHhhCCCcccccCCcCCCCcchhhcccCCCCCCCCCHHHHHHHHHHCCCChh
Q 043984          113 DRIKNKIESDCPGIVSCADILTIAARDAIILVGGPYWDVPVGRKDSKTASYALADSNLPSPDEGLLSIISKFHYQGLSVT  192 (338)
Q Consensus       113 ~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  192 (338)
                      +.||++||..||++|||||||+||||+||+.+|||.|+|++||+|+.+++..++..+||.|+.++++|++.|++|||+.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             hhhhcccccccccccccccccccccCCCCCCCCCCCCHHHHHHhhhcCCCCCCCCCCcCCCCCCCCccChHHHHHhhcCc
Q 043984          193 DMVALSGAHTIGMARCVNYRKRIYGDYRVTSGINPLSETHLSVLKSICPPIGSDNNETAMDYETPNLFDNSFYQILLQGE  272 (338)
Q Consensus       193 elVaLsGaHTiG~~hc~~f~~Rl~~~~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~  272 (338)
                      ||||||||||||++||.+|..|+|+|.+++.+||++++.|+..|+..||..+...+++.+|..||.+|||+||++++.++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~~  240 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN  240 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTTC
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999998777777889999999999999999999999


Q ss_pred             ccccchhhhhcCCcchhHHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCCCCCCCeecccccCCC
Q 043984          273 GVLNSDQEMYSSIFGIQTKELVNKYAHDALAFFQQFSDSMVKMGNITNPESFVNGEVRKNCRFVN  337 (338)
Q Consensus       273 glL~SD~~L~~d~~~~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~igvltG~~~GeIR~~C~~vn  337 (338)
                      |+|+|||+|+.|+ +++|+++|++||.|++.|+++|++||+||++|+|||| .+|||||+|+++|
T Consensus       241 glL~SD~~L~~dp-~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg-~~GeiR~~C~~~N  303 (304)
T d1fhfa_         241 GLLQSDQELFSTP-GADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTG-DEGEIRLQCNFVN  303 (304)
T ss_dssp             CSSHHHHTTTSST-TCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCT-TSSBCCSBTTBCC
T ss_pred             cccHhhHHHHhCC-CchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCC-CCCcccCcccCcC
Confidence            9999999999995 1269999999999999999999999999999999999 9999999999999
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure