Citrus Sinensis ID: 044049

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MEKTARVLFIACILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGVPAPPAPPSPGTYDMIYN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHcccccHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHcHcccccHcccccccccccccHHHHHHHHHccccHHHHHEEcccccccEEEcHHHHHcccHHcccccccccHccccccccccccccHHHHcc
Coil and Loop (DISEMBL)
MEKTARVLFIACILVAWgggavtaletsspsaspgpqpsgdcseVIYNLSDCLDflskgsnhtkpgsnccsgfeSVIKSNFHCICEAIKsssdlgldlnltraftlssdcaisapplkkcgvpappappspgtydmiyn
Flexible Loop (DISEMBL)
MEKTARVLFIACILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISapplkkcgvpappappspgtydmiyn
Low Complexity Region (SEG)
MEKTARVLFIACILVAWGGGAVTALETsspsaspgpqpsgDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGVpappappspGTYDMIYN
Disordered region (IsUnstruct)
*****RVLFIACILVAWGGGAVTAL*****************SEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAIS**************************
Disordered Region (DISOPRED)
****ARVLFIACILVAWGGGAVTA*********************IYNLSDCLDFLS******KP**NCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPL**********************
Disordered Region (DISEMBL)
MEKTARVLFIACILVAWGGGAVTA****************DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGVPAPPAPPSPGTYDMIYN
Disordered Region (DISPRO)
**KTARVLFIACILVAWGGGAVTALETSSP********SGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGV**********TY*****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEKTARVLFIACILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGVPAPPAPPSPGTYDMIYN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
Q8VYI9	182	Non-specific lipid-transf	yes	no	0.661	0.505	0.467	9e-20
Q9ZQI8	169	Non-specific lipid-transf	no	no	0.647	0.532	0.444	2e-18
Q6ASY2	178	Non-specific lipid transf	no	no	0.798	0.623	0.350	2e-09
Q9ZVC7	176	Xylogen-like protein 11 O	no	no	0.669	0.528	0.326	1e-07

>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1

 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 62/92 (67%)

Query: 36  PQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLG 95
           P PS DCS +I N++DCL F+S G    KP   CCSG ++V+K++  C+CEA KSS+ LG
Sbjct: 37  PAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLG 96

Query: 96  LDLNLTRAFTLSSDCAISAPPLKKCGVPAPPA 127
           + LN+T+A TL + C + AP +  CG+   P+
Sbjct: 97  VTLNITKASTLPAACKLHAPSIATCGLSVAPS 128

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 61/90 (67%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNL 100
           DCS +I N++DCL F++ GS   KP   CCSG ++V+++   C+CEA K+S  LGL L+L
Sbjct: 26  DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85

Query: 101 TRAFTLSSDCAISAPPLKKCGVPAPPAPPS 130
           ++A +L S C ++APP  +CG+     PP+
Sbjct: 86  SKAASLPSVCKVAAPPSARCGLSVSGDPPA 115

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 6/117 (5%)

Query: 12  CILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNH-TKPGSNCC 70
           C+LV  G  AV  ++ ++ S SP P P+ DC+     L+DCLD+++ G    ++P   CC
Sbjct: 12  CLLV-VGLAAVAGVDGATAS-SPAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPSKLCC 69

Query: 71  SGFESVIKSN--FHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGVPAP 125
              +  +K +    C+C A  S + L L +N+TRA  L + C   A    KC  PAP
Sbjct: 70  GEVKGALKDSAAVGCLCAAFTSKT-LPLPINITRALHLPAACGADASAFSKCLAPAP 125

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9ZVC7|XYP11_ARATH Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 30  PSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAI- 88
           P A+ GP    +C   + N+SDC  ++  GSN  KP + CC     +++S+  C+C    
Sbjct: 28  PIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYG 87

Query: 89  -KSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGV 122
             +S   G+ L+  RA  LS+ C + AP    C V
Sbjct: 88  GGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSV 122

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
224082164	129	predicted protein [Populus trichocarpa]	0.834	0.899	0.508	9e-26
356558638	177	PREDICTED: non-specific lipid-transfer p	0.870	0.683	0.419	1e-19
357445793	173	Non-specific lipid-transfer protein [Med	0.870	0.699	0.417	2e-19
49204581	183	xylogen protein 1 [Zinnia elegans]	0.661	0.502	0.454	2e-18
42573786	178	Non-specific lipid-transfer protein-like	0.669	0.522	0.462	6e-18
10176956	173	unnamed protein product [Arabidopsis tha	0.654	0.526	0.483	6e-18
18424785	182	Non-specific lipid-transfer protein-like	0.661	0.505	0.467	7e-18
225447741	187	PREDICTED: non-specific lipid-transfer p	0.834	0.620	0.362	7e-18
296081545	185	unnamed protein product [Vitis vinifera]	0.834	0.627	0.362	7e-18
21618136	182	nonspecific lipid-transfer protein-like	0.669	0.510	0.462	1e-17

>gi|224082164|ref|XP_002306589.1| predicted protein [Populus trichocarpa] gi|222856038|gb|EEE93585.1| predicted protein [Populus trichocarpa]

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 78/116 (67%)

Query: 6   RVLFIACILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNHTKP 65
           R LFI CIL      A +A   SSP  SP P PS DC++V +++ DC+ +LS GS   KP
Sbjct: 3   RSLFIGCILATLALLANSAHHESSPRKSPAPSPSADCTDVAFDMLDCITYLSDGSEAAKP 62

Query: 66  GSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCG 121
            ++CC+GFE+V+  +  C+C A+K S+D G+ LNLTRA  LSS C +SAPPL KCG
Sbjct: 63  TASCCAGFEAVLSLDAECLCFALKHSADFGVALNLTRAAALSSKCGVSAPPLSKCG 118

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558638|ref|XP_003547611.1| PREDICTED: non-specific lipid-transfer protein-like protein At5g64080-like [Glycine max]

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 74/124 (59%), Gaps = 3/124 (2%)

Query: 4   TARVLFIACILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNHT 63
           TA+   I C++  W   AV    +S  + +P P PS +CS ++  LSDCL F+S GS  T
Sbjct: 2   TAKWYLIVCVVAIW---AVDLGSSSHHARAPAPAPSVECSNLVLTLSDCLTFVSNGSTVT 58

Query: 64  KPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGVP 123
           KP   CCS  ++V+ +   C+CEA  SS+ LGL +N+T+A TL + C +S P    CG+ 
Sbjct: 59  KPQGTCCSSLKTVLNTAPKCLCEAFNSSAQLGLAINVTKAVTLPAACKLSTPSAANCGLS 118

Query: 124 APPA 127
           A PA
Sbjct: 119 ATPA 122

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445793|ref|XP_003593174.1| Non-specific lipid-transfer protein [Medicago truncatula] gi|355482222|gb|AES63425.1| Non-specific lipid-transfer protein [Medicago truncatula]

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 79/127 (62%), Gaps = 6/127 (4%)

Query: 9   FIACILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSN 68
           FI  I V W          S+ SA   P PS DCS ++  ++DCL F+S  S  TKP   
Sbjct: 7   FILSIFVIWAVD-----FPSASSARDAPSPSADCSTIVVIMADCLSFVSNDSTITKPSGA 61

Query: 69  CCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCGVP-APPA 127
           CCSG ++V+K++  C+C+++K+S++LG+ LN+T+A TL + C +SAPPL  CG+  AP  
Sbjct: 62  CCSGLKTVLKTSPTCLCDSLKNSANLGVVLNVTKAATLPAACGLSAPPLSNCGLSIAPVG 121

Query: 128 PPSPGTY 134
             +PG +
Sbjct: 122 AATPGMF 128

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49204581|dbj|BAD24657.1| xylogen protein 1 [Zinnia elegans]

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 7/99 (7%)

Query: 35  GPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDL 94
            P P+ DCS VI N++DCL +++ GS   KP   CCSG ++V+K++  C+CEA K+S+ L
Sbjct: 30  APAPAADCSTVILNMADCLSYVTAGSTVKKPEGTCCSGLKTVLKTDAECLCEAFKNSAQL 89

Query: 95  GLDLNLTRAFTLSSDCAISAPPLKKCGVPAPPAPPSPGT 133
           G+ LN+T+A  L S C I+AP    CG+       SPGT
Sbjct: 90  GVSLNITKALALPSACHINAPSATNCGI-------SPGT 121

Source: Zinnia elegans

Species: Zinnia violacea

Genus: Zinnia

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42573786|ref|NP_974989.1| Non-specific lipid-transfer protein-like protein [Arabidopsis thaliana] gi|332010455|gb|AED97838.1| Non-specific lipid-transfer protein-like protein [Arabidopsis thaliana]

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 62/93 (66%)

Query: 35  GPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDL 94
            P PS DCS +I N++DCL F+S G    KP   CCSG ++V+K++  C+CEA KSS+ L
Sbjct: 36  APAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASL 95

Query: 95  GLDLNLTRAFTLSSDCAISAPPLKKCGVPAPPA 127
           G+ LN+T+A TL + C + AP +  CG+   P+
Sbjct: 96  GVTLNITKASTLPAACKLHAPSIATCGLSVAPS 128

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10176956|dbj|BAB10276.1| unnamed protein product [Arabidopsis thaliana]

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 61/91 (67%)

Query: 35  GPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDL 94
            P PS DCS +I N++DCL F+S G    KP   CCSG ++V+K++  C+CEA KSS+ L
Sbjct: 36  APAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASL 95

Query: 95  GLDLNLTRAFTLSSDCAISAPPLKKCGVPAP 125
           G+ LN+T+A TL + C + AP +  CG  AP
Sbjct: 96  GVTLNITKASTLPAACKLHAPSIATCGCLAP 126

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424785|ref|NP_568984.1| Non-specific lipid-transfer protein-like protein [Arabidopsis thaliana] gi|75161488|sp|Q8VYI9.1|NLTL5_ARATH RecName: Full=Non-specific lipid-transfer protein-like protein At5g64080; Flags: Precursor gi|17979494|gb|AAL50083.1| AT5g64080/MHJ24_6 [Arabidopsis thaliana] gi|20147301|gb|AAM10364.1| AT5g64080/MHJ24_6 [Arabidopsis thaliana] gi|332010454|gb|AED97837.1| Non-specific lipid-transfer protein-like protein [Arabidopsis thaliana]

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 62/92 (67%)

Query: 36  PQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLG 95
           P PS DCS +I N++DCL F+S G    KP   CCSG ++V+K++  C+CEA KSS+ LG
Sbjct: 37  PAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLG 96

Query: 96  LDLNLTRAFTLSSDCAISAPPLKKCGVPAPPA 127
           + LN+T+A TL + C + AP +  CG+   P+
Sbjct: 97  VTLNITKASTLPAACKLHAPSIATCGLSVAPS 128

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447741|ref|XP_002263068.1| PREDICTED: non-specific lipid-transfer protein-like protein At5g64080-like [Vitis vinifera]

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 11/127 (8%)

Query: 1   MEKTARVLFIACILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGS 60
           M +   +LF+  I     G   T+           P P+ DCS ++ N++DCL ++S GS
Sbjct: 8   MLRVVMMLFVVGICCVEAGSQQTS-----------PSPAVDCSSLVLNMADCLSYVSNGS 56

Query: 61  NHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKC 120
             +KP   CC+G ++V+K++  C+CEA KSS+  G+ LN+T+A  L + C +SAP +  C
Sbjct: 57  TASKPEGTCCTGLKTVLKADAECLCEAFKSSAQYGVVLNVTKAIYLPTACRVSAPSVSNC 116

Query: 121 GVPAPPA 127
           G+   PA
Sbjct: 117 GLSITPA 123

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081545|emb|CBI20068.3| unnamed protein product [Vitis vinifera]

 Score = 95.1 bits (235), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 11/127 (8%)

Query: 1   MEKTARVLFIACILVAWGGGAVTALETSSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGS 60
           M +   +LF+  I     G   T+           P P+ DCS ++ N++DCL ++S GS
Sbjct: 6   MLRVVMMLFVVGICCVEAGSQQTS-----------PSPAVDCSSLVLNMADCLSYVSNGS 54

Query: 61  NHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKC 120
             +KP   CC+G ++V+K++  C+CEA KSS+  G+ LN+T+A  L + C +SAP +  C
Sbjct: 55  TASKPEGTCCTGLKTVLKADAECLCEAFKSSAQYGVVLNVTKAIYLPTACRVSAPSVSNC 114

Query: 121 GVPAPPA 127
           G+   PA
Sbjct: 115 GLSITPA 121

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21618136|gb|AAM67186.1| nonspecific lipid-transfer protein-like protein [Arabidopsis thaliana]

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 62/93 (66%)

Query: 35  GPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDL 94
            P PS DCS +I N++DCL F+S G    KP   CCSG ++V+K++  C+CEA KSS+ L
Sbjct: 36  APAPSVDCSILILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASL 95

Query: 95  GLDLNLTRAFTLSSDCAISAPPLKKCGVPAPPA 127
           G+ LN+T+A TL + C + AP +  CG+   P+
Sbjct: 96  GVTLNITKASTLPAACKLHAPSIATCGLSVAPS 128

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
TAIR|locus:2164411	182	XYP1 "xylogen protein 1" [Arab	0.589	0.450	0.475	2.5e-19
TAIR|locus:2043750	169	XYP2 "xylogen protein 2" [Arab	0.589	0.485	0.463	5.1e-19
TAIR|locus:2138586	208	AT4G08670 [Arabidopsis thalian	0.575	0.384	0.469	1.2e-17
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.553	0.420	0.412	1.5e-12
TAIR|locus:2034325	256	AT1G36150 [Arabidopsis thalian	0.575	0.312	0.378	2.4e-12
TAIR|locus:2184817	158	AT5G09370 [Arabidopsis thalian	0.568	0.5	0.35	3.9e-12
UNIPROTKB|Q6ASY2	178	LTPL1 "Non-specific lipid tran	0.841	0.657	0.300	1.2e-10
TAIR|locus:2077001	170	AT3G22600 [Arabidopsis thalian	0.553	0.452	0.3	1.5e-10
TAIR|locus:2035711	227	AT1G55260 [Arabidopsis thalian	0.784	0.480	0.286	5.2e-10
TAIR|locus:505006466	156	AT4G14815 [Arabidopsis thalian	0.553	0.493	0.287	8.4e-10

TAIR|locus:2164411 XYP1 "xylogen protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 39/82 (47%), Positives = 57/82 (69%)

Query:    41 DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNL 100
             DCS +I N++DCL F+S G    KP   CCSG ++V+K++  C+CEA KSS+ LG+ LN+
Sbjct:    42 DCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNI 101

Query:   101 TRAFTLSSDCAISAPPLKKCGV 122
             T+A TL + C + AP +  CG+
Sbjct:   102 TKASTLPAACKLHAPSIATCGL 123

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2043750 XYP2 "xylogen protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 38/82 (46%), Positives = 58/82 (70%)

Query:    41 DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNL 100
             DCS +I N++DCL F++ GS   KP   CCSG ++V+++   C+CEA K+S  LGL L+L
Sbjct:    26 DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85

Query:   101 TRAFTLSSDCAISAPPLKKCGV 122
             ++A +L S C ++APP  +CG+
Sbjct:    86 SKAASLPSVCKVAAPPSARCGL 107

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2138586 AT4G08670 [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 39/83 (46%), Positives = 55/83 (66%)

Query:    41 DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNL 100
             DCS VIY++ DCL +L  GSN TKP  +CC+G E+V++ N  CIC  + S+ ++G++LN 
Sbjct:    47 DCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSAGEMGIELNS 106

Query:   101 TRAFTLSSDCAIS-APPLKKCGV 122
             TRA      C +S APP   CG+
Sbjct:   107 TRALATPKACKLSIAPP--HCGI 127

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 33/80 (41%), Positives = 47/80 (58%)

Query:    42 CSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSS-SDLGLDLNL 100
             C   +  LS CL +++   N T P   CCS  +SVIKS+  CIC A+ S   ++GL++N 
Sbjct:    30 CVSTLTTLSPCLSYIT--GNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGLNINR 87

Query:   101 TRAFTLSSDCAISAPPLKKC 120
             T+A  L + C I  PPL +C
Sbjct:    88 TQALQLPNACNIQTPPLTQC 107

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2034325 AT1G36150 [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 31/82 (37%), Positives = 47/82 (57%)

Query:    41 DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNL 100
             DCS VIY++ DCL FL+ GS    P   CC G ++V+  +  C+C A++SS ++G  L+ 
Sbjct:    44 DCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMGFVLDD 103

Query:   101 TRAFTLSSDCAISAPPLKKCGV 122
             T+A  +   C +   P   C V
Sbjct:   104 TKALAMPKICNVPIDP--NCDV 123

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2184817 AT5G09370 [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 28/80 (35%), Positives = 48/80 (60%)

Query:    41 DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNL 100
             DC  ++  L  CL F+S G     P ++CCS  ++++ +   C+CE +K +  LG+ LN+
Sbjct:    27 DCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCEGLKKAP-LGIKLNV 85

Query:   101 TRAFTLSSDCAISAPPLKKC 120
             T++ TL   C ++APP+  C
Sbjct:    86 TKSATLPVACKLNAPPVSAC 105

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

UNIPROTKB|Q6ASY2 LTPL1 "Non-specific lipid transfer protein-like 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 37/123 (30%), Positives = 56/123 (45%)

Query:     1 MEKTARVLFIACILVAWGGGAVTALETXXXXXXXXXXXXXDCSEVIYNLSDCLDFLSKGS 60
             M   AR   +AC+LV  G  AV  ++              DC+     L+DCLD+++ G 
Sbjct:     1 MAVAARAAAVACLLVV-GLAAVAGVD-GATASSPAPAPAVDCTAEALKLADCLDYVTPGK 58

Query:    61 NH-TKPGSNCCSGFESVIKSN--FHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPL 117
                ++P   CC   +  +K +    C+C A  S + L L +N+TRA  L + C   A   
Sbjct:    59 TAPSRPSKLCCGEVKGALKDSAAVGCLCAAFTSKT-LPLPINITRALHLPAACGADASAF 117

Query:   118 KKC 120
              KC
Sbjct:   118 SKC 120

GO:0032578 "aleurone grain membrane" evidence=IDA

TAIR|locus:2077001 AT3G22600 [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 24/80 (30%), Positives = 46/80 (57%)

Query:    42 CSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSS-SDLGLDLNL 100
             C+  + ++S CL++++   N T P   CC+    V++S+  C+C+ +    S LG+++N 
Sbjct:    28 CTNALISMSPCLNYIT--GNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQ 85

Query:   101 TRAFTLSSDCAISAPPLKKC 120
             T+A  L   C +  PP+ +C
Sbjct:    86 TQALGLPRACNVQTPPVSRC 105

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2035711 AT1G55260 [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 35/122 (28%), Positives = 58/122 (47%)

Query:     1 MEKTARVLFIACILVAWGGGAVTALETXXXXXXXXXXXXXDCSEVIYNLSDCLDFLSKGS 60
             MEK+ R LFI  +        +T++               +C+  +  LS C+ ++  G 
Sbjct:    44 MEKSTRTLFITIV--------ITSM-LLGFGNSDLAQDREECTNQLIELSTCIPYV--GG 92

Query:    61 NHTKPGSNCCSGFESVIKSNFHCICEAIKSSSD--LGLDLNLTRAFTLSSDCAISAPPLK 118
             +   P  +CC+GF  VI+ +  C+C  ++   D  LG+ +N T A  L S C I+AP + 
Sbjct:    93 DAKAPTKDCCAGFGQVIRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNIT 152

Query:   119 KC 120
              C
Sbjct:   153 DC 154

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:505006466 AT4G14815 [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 23/80 (28%), Positives = 45/80 (56%)

Query:    42 CSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSS-SDLGLDLNL 100
             C+ V+ +++ CL F+++  N + P   CC+    V++ +  C+C+ +    S LG+++N 
Sbjct:    26 CTNVLISMAPCLSFITQ--NTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGINVNE 83

Query:   101 TRAFTLSSDCAISAPPLKKC 120
             T+A  L   C +  PP  +C
Sbjct:    84 TQALALPKACHVETPPASRC 103

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0002004902 hypothetical protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) (130 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	139
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	7e-08
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	2e-07
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	2e-06
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	2e-05
cd01960	89	cd01960, nsLTP1, nsLTP1: Non-specific lipid-transf	1e-04

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 47.1 bits (112), Expect = 7e-08
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 28  SSPSASPGPQPSGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEA 87
           S+ +A P P  +  C++   +L  CL      +    P   CC+  ++ +K++  C+C+ 
Sbjct: 8   SAAAAPPAPASAASCAD---SLLPCLG-YCYVNGTAAPSPACCAALKAAVKADVPCLCDL 63

Query: 88  IKSSSDLGLDLNLTRAFTLSSDCAISAPPLK 118
           + S    G  +NLTRA  L   C +++PP K
Sbjct: 64  VTSPLAAGFGINLTRAVALPKACGLTSPPSK 94

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 45.1 bits (107), Expect = 2e-07
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)

Query: 49  LSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDL-NLTRAFTLS 107
           L+ CL +L+ G+  T P S+CCSG +SV+KS+  C+C A+       L L N TRA  L 
Sbjct: 1   LAPCLSYLTGGA--TAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALP 58

Query: 108 SDC 110
           + C
Sbjct: 59  AAC 61

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 42.5 bits (100), Expect = 2e-06
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 42  CSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLT 101
           C +V+  L+ C  +L  G     P   CCS    +      C C AI++       +N  
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQ--VPSQQCCSQLRQL---QAQCRCTAIRAIVLGIEGINPQ 55

Query: 102 RAFTLSSDCAISAPPLKKC 120
            A +L S C ++ P    C
Sbjct: 56  AAASLPSMCGVNVPYGIDC 74

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 9/85 (10%)

Query: 42  CSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLT 101
           C +V+  L+ CL +L  GS    P   CCS    +  +   C C A++++      L + 
Sbjct: 1   CGQVLLQLAPCLSYLVGGSRGAPPSQQCCSQLRGLNSA--QCRCLALRAAV-----LGIL 53

Query: 102 RAFTLSSDCAISAPPLKKCGVPAPP 126
               L++  A S P    CGVP P 
Sbjct: 54  EIPGLNAQNAASLP--SACGVPPPY 76

Length = 79

>gnl|CDD|238926 cd01960, nsLTP1, nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 38.5 bits (90), Expect = 1e-04
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESV-----IKSNFHCICEAIKSSSDLG 95
            C +V   L+ CL +L+ G     P   CCSG +S+       ++    C  +KS++   
Sbjct: 2   SCGQVTSLLAPCLGYLTGGGP--APSPACCSGVKSLNGLAKTTADRQAACNCLKSAAAGI 59

Query: 96  LDLNLTRAFTLSSDCAISAP 115
             LN  RA  L   C +S P
Sbjct: 60  SGLNPGRAAGLPGKCGVSIP 79

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans. Length = 89

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.64
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.63
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.62
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.52
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.34
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.16
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.8
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	97.77
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	97.73

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.64  E-value=2.7e-16  Score=104.43  Aligned_cols=73  Identities=22%  Similarity=0.628  Sum_probs=61.2

Q ss_pred             CHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCCCCCCC
Q 044049           42 CSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKC  120 (139)
Q Consensus        42 C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p~~~~C  120 (139)
                      |...+..|.+|++|++++++...|++.||++++++   +++|+|.+++... +. .||.+||.+||+.||+++|+ ++|
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~~-~~-~i~~~~a~~Lp~~Cgv~~p~-~~C   73 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSLV-LQ-IIDPDKAVYLPAKCGLPLPP-SSC   73 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCCc-cc-ccCHHHHHHHHHHcCCCCCC-CCC
Confidence            55667789999999998643457999999999985   7789999987543 33 59999999999999999998 887

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.63  E-value=3.5e-16  Score=107.18  Aligned_cols=73  Identities=34%  Similarity=0.702  Sum_probs=63.7

Q ss_pred             CCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----CcccccccccccccCCCC-CCHHHHHHhhhhcCCCC
Q 044049           41 DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----NFHCICEAIKSSSDLGLD-LNLTRAFTLSSDCAISA  114 (139)
Q Consensus        41 ~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~~~CLC~~i~~~~~~~~~-in~~ra~~LP~~Cgv~~  114 (139)
                      +|.+++..|.||++|+++++  ..|++.||++++++++.     +++|+|+++++.. .++. ||.+|+++||++||+++
T Consensus         2 ~C~~v~~~l~~C~~y~~g~~--~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~-~~~~~i~~~~a~~LP~~C~v~~   78 (89)
T cd01960           2 SCGQVTSLLAPCLGYLTGGG--PAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAA-AGISGLNPGRAAGLPGKCGVSI   78 (89)
T ss_pred             CHHHHHhhHHhHHHHHhCCC--CCCChHHhhhhHHHhhccCCCCchhhhhhcccccc-cccCCCCHHHHHhChHhcccCC
Confidence            69999999999999999863  68999999999999764     6789999998765 3554 99999999999999998


Q ss_pred             CC
Q 044049          115 PP  116 (139)
Q Consensus       115 p~  116 (139)
                      ++
T Consensus        79 ~~   80 (89)
T cd01960          79 PY   80 (89)
T ss_pred             CC
Confidence            75

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.62  E-value=6.6e-17  Score=110.77  Aligned_cols=78  Identities=29%  Similarity=0.793  Sum_probs=49.5

Q ss_pred             CCCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCCCCC
Q 044049           39 SGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLK  118 (139)
Q Consensus        39 ~~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p~~~  118 (139)
                      ..+|.+.+....+|..|+++   ...|++.||++++++.+.++.|||+++++....+++||.+|+..||++||+++++ +
T Consensus        19 ~~~c~~~l~~c~~~~~~~~~---~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~in~~~a~~Lp~~Cg~~~~~-~   94 (96)
T PF14368_consen   19 CCSCANSLLPCCPCLCYVTG---GPAPSAACCSALKSVVQADPPCLCQLLNSPGAPGFGINVTRALALPAACGVPVPP-S   94 (96)
T ss_dssp             TTB-HCCCCHH--HHHHHCC--------HHHHHHHCC----HCCHHHCCCC-CCHCHHCCTCHHHHHHHHHCTSS-S---
T ss_pred             cchhHHHHhccccchhccCC---CCCCCHHHHHHHHHhccCCCCCHHHhcCccccccCCcCHHHHHHHHHHcCCCCCC-C
Confidence            56786643333344888874   3689999999999998889999999998865235689999999999999999988 7


Q ss_pred             CC
Q 044049          119 KC  120 (139)
Q Consensus       119 ~C  120 (139)
                      +|
T Consensus        95 ~C   96 (96)
T PF14368_consen   95 KC   96 (96)
T ss_dssp             --
T ss_pred             CC
Confidence            77

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.52  E-value=1.3e-14  Score=93.04  Aligned_cols=62  Identities=44%  Similarity=0.899  Sum_probs=53.4

Q ss_pred             ccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCC-CHHHHHHhhhhcCC
Q 044049           49 LSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDL-NLTRAFTLSSDCAI  112 (139)
Q Consensus        49 L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~i-n~~ra~~LP~~Cgv  112 (139)
                      |.||++|+++++  ..|++.||++++++.+.++.|||+++++......++ |.+++..||++||+
T Consensus         1 L~~C~~y~~~~~--~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGA--TAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCC--CCCChHHHHHHHHHHhcChhhHHHHHcCccccccCcccHHHHHhchHhcCC
Confidence            579999999753  689999999999999889999999999866423345 79999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.34  E-value=9.4e-13  Score=86.27  Aligned_cols=61  Identities=28%  Similarity=0.597  Sum_probs=52.8

Q ss_pred             hcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCC
Q 044049           47 YNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAP  115 (139)
Q Consensus        47 ~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p  115 (139)
                      .+|.+|++|++++   .+||++||+.+|+.    ..|||++++++. ++..||.++|++|++.||+++|
T Consensus         4 ~~L~~C~~ai~~~---~~Ps~~CC~~Lk~~----~~CLC~y~~~p~-l~~~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           4 TQLSPCLPAILGG---SPPSAACCAKLKEQ----QSCLCQYAKNPS-LKQYVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhcccCHHHHhCC---CCCCHHHHHHHhcC----CCCeeeeecCcc-HHhhcCcHHHHHHHHHcCCCCC
Confidence            4799999999975   58999999999983    389999998765 4556999999999999999986

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.16  E-value=8.7e-11  Score=76.32  Aligned_cols=72  Identities=31%  Similarity=0.707  Sum_probs=59.2

Q ss_pred             CHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCC----CCHHHHHHhhhhcCCCCCC
Q 044049           42 CSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLD----LNLTRAFTLSSDCAISAPP  116 (139)
Q Consensus        42 C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~----in~~ra~~LP~~Cgv~~p~  116 (139)
                      |.+.+.++.+|.+|+++......|+..||++++++.  +..|+|..++.... .+.    ++..++..||+.||+..++
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~-~~~~~~~~~~~~a~~lp~~C~~~~~~   76 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVL-GILEIPGVNAQNAASLPSACGVPPPY   76 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcccc-cccchhhhhHHHHHhhHHhcCCCCCC
Confidence            667777888999999875224689999999999986  78899999887542 332    6999999999999999864

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.80  E-value=3.7e-10  Score=76.70  Aligned_cols=67  Identities=33%  Similarity=0.726  Sum_probs=55.2

Q ss_pred             hcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCC-----------CCCCHHHHHHhhhhcCCCCC
Q 044049           47 YNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLG-----------LDLNLTRAFTLSSDCAISAP  115 (139)
Q Consensus        47 ~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~-----------~~in~~ra~~LP~~Cgv~~p  115 (139)
                      ..+.+|..|++++.  ..|+..||++|+++   ++.|.|..|+.... +           ..++..+|..||+.||+.++
T Consensus        13 ~~l~~c~~~~~~~~--~~~~~~CC~~L~~l---~~~C~C~~i~~~~~-~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~   86 (90)
T PF00234_consen   13 VRLSPCLPYLQGGC--QQPSQQCCQQLRQL---DPQCRCEAIRQMVR-QVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPP   86 (90)
T ss_dssp             SHHHGGHHHHTTSS--SHHHHHHHHHHHHH---HHHHHHHHHHHHHH-HSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSS
T ss_pred             ccccccHHHHhccc--ccchHHHhHHHHHH---hHHhhCHHHHHHHH-hhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCC
Confidence            34899999999752  47899999999998   88999999986542 3           26899999999999999987


Q ss_pred             CCCCC
Q 044049          116 PLKKC  120 (139)
Q Consensus       116 ~~~~C  120 (139)
                      + .+|
T Consensus        87 ~-~~C   90 (90)
T PF00234_consen   87 Y-TDC   90 (90)
T ss_dssp             S-S-G
T ss_pred             C-CCC
Confidence            6 444

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=97.77  E-value=9.7e-06  Score=55.60  Aligned_cols=79  Identities=27%  Similarity=0.550  Sum_probs=58.2

Q ss_pred             CHhhhhcccccHHHhhCC--CCCCCCChhHHHHHHhhhccCc-ccccccccccccCC-CCCCHHHHHH-hhhhcCCCCCC
Q 044049           42 CSEVIYNLSDCLDFLSKG--SNHTKPGSNCCSGFESVIKSNF-HCICEAIKSSSDLG-LDLNLTRAFT-LSSDCAISAPP  116 (139)
Q Consensus        42 C~~~~~~L~pCl~yl~~~--~~~~~Ps~~CC~alk~l~~~~~-~CLC~~i~~~~~~~-~~in~~ra~~-LP~~Cgv~~p~  116 (139)
                      |..+..+|.-|.+.+...  ....++...||+-++.+.+.|. .|||..++.+. ++ +++|....++ |-..||...|.
T Consensus         2 CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~v-lg~i~~~ipv~l~~lln~CGk~~p~   80 (85)
T PF14547_consen    2 CPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKANV-LGLINVNIPVALNLLLNACGKTVPS   80 (85)
T ss_pred             CCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhhc-ccccccccccHHHHHHHHhCCcCcC
Confidence            555556788898888211  0123578899999999987764 79999999765 56 5666665665 57889999998


Q ss_pred             CCCCC
Q 044049          117 LKKCG  121 (139)
Q Consensus       117 ~~~C~  121 (139)
                      +++|.
T Consensus        81 gf~C~   85 (85)
T PF14547_consen   81 GFTCP   85 (85)
T ss_pred             CCcCC
Confidence            88883

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=97.73  E-value=4.3e-05  Score=52.42  Aligned_cols=79  Identities=27%  Similarity=0.552  Sum_probs=60.2

Q ss_pred             CCHhhhhcccccHHHhhCCC--CCCCCChhHHHHHHhhhccCc-ccccccccccccCCCCCCHHHHHHh-hhhcCCCCCC
Q 044049           41 DCSEVIYNLSDCLDFLSKGS--NHTKPGSNCCSGFESVIKSNF-HCICEAIKSSSDLGLDLNLTRAFTL-SSDCAISAPP  116 (139)
Q Consensus        41 ~C~~~~~~L~pCl~yl~~~~--~~~~Ps~~CC~alk~l~~~~~-~CLC~~i~~~~~~~~~in~~ra~~L-P~~Cgv~~p~  116 (139)
                      .|..+..+|.-|.+-+..-.  ....|..+||+-++.+.+.|. .|||..++.+. +++.+|..-.+.+ -..||...|.
T Consensus         3 ~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan~-lgi~~~~pv~l~llln~CGk~~P~   81 (85)
T cd01958           3 TCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKANI-LGISINIPVALSLLLNSCGRNVPP   81 (85)
T ss_pred             CCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeeccc-cCcccccChhHHHHHHHHcCcCCC
Confidence            46666667888888874211  124677899999999988774 79999999765 6777777777775 6689999998


Q ss_pred             CCCC
Q 044049          117 LKKC  120 (139)
Q Consensus       117 ~~~C  120 (139)
                      +++|
T Consensus        82 gf~C   85 (85)
T cd01958          82 GFTC   85 (85)
T ss_pred             CCcC
Confidence            8887

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	139
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	9e-09
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	3e-07
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	4e-06
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	7e-06
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	8e-06

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 48.7 bits (116), Expect = 9e-09
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVI-----KSNFHCICEAIKSSSDLG 95
            C +V   ++ C+ +     +   P + CCSG  S+       ++    C  +K+++   
Sbjct: 3   SCGQVASAIAPCISYARGQGS--GPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGV 60

Query: 96  LDLNLTRAFTLSSDCAISAP 115
             LN   A ++ S C +S P
Sbjct: 61  SGLNAGNAASIPSKCGVSIP 80

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A* Length = 90

 Score = 44.4 bits (105), Expect = 3e-07
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVI-----KSNFHCICEAIKSSSDLG 95
           DC  V   +  CL ++  G     P   CC G +++      +S+    C  +K  +   
Sbjct: 2   DCGHVDSLVRPCLSYVQGGP---GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGI 58

Query: 96  LDLNLTRAFTLSSDCAISAP 115
            +LN   A ++   C ++ P
Sbjct: 59  HNLNEDNARSIPPKCGVNLP 78

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A* Length = 92

 Score = 41.7 bits (98), Expect = 4e-06
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 8/80 (10%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVI-----KSNFHCICEAIKSSSDLG 95
            C +V  +L+ C+ ++  G         CC+G  +V        +    C  +K  S   
Sbjct: 3   TCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASV 59

Query: 96  LDLNLTRAFTLSSDCAISAP 115
             +N   A  L   C +S P
Sbjct: 60  PGVNPNNAAALPGKCGVSIP 79

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum} Length = 91

 Score = 41.0 bits (96), Expect = 7e-06
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVI-----KSNFHCICEAIKSSSDLG 95
            C +V  NL+ CL +L        P   CC G ++++       +    C  +KS++   
Sbjct: 3   TCGQVTSNLAPCLAYLRNTG----PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAI 58

Query: 96  LDLNLTRAFTLSSDCAISAP 115
             +NL +A  L S C ++ P
Sbjct: 59  SGINLGKAAGLPSTCGVNIP 78

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var} Length = 91

 Score = 41.0 bits (96), Expect = 8e-06
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESV-----IKSNFHCICEAIKSSSDLG 95
            C +V  NL+ C+ FL KG        +CC+G +++       ++   +C  +K+++   
Sbjct: 2   TCGQVQGNLAQCIGFLQKGG---VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAV 58

Query: 96  LDLNLTRAFTLSSDCAISAP 115
             +N   A  L   C ++ P
Sbjct: 59  RGINPNNAEALPGKCGVNIP 78

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	139
2ljo_A	93	Non-specific lipid-transfer protein 2; lipid trans	99.75
2rkn_A	77	DIR1 protein, AT5G48485; LTP, defense signaling pr	99.63
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	99.6
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	99.58
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	99.58
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	99.56
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	99.55
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	99.41
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	99.39
1hyp_A	80	Hydrophobic protein from soybean; hydrophobic SEED	97.5
3ob4_A	500	Conglutin, maltose ABC transporter periplasmic pro	94.25
1s6d_A	103	Albumin 8; all helix, folded LEAF, right-handed su	92.63
1sm7_A	109	Recombinant IB pronapin; all alpha-helix, right-ha	90.15
1psy_A	125	2S albumin, RICC3; albumin SEED protein, SEED stor	88.93
1w2q_A	127	Conglutin, ARA H 6; allergen, allergene; NMR {Arac	85.24
2ds2_B	72	Sweet protein mabinlin-2 chain B; plant protein, S	84.32
1pnb_B	75	Napin BNIB; napin IA and IB, albumin SEED protein,	82.1

>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}

Probab=99.75  E-value=3.9e-19  Score=122.62  Aligned_cols=81  Identities=27%  Similarity=0.636  Sum_probs=68.7

Q ss_pred             CCCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----CcccccccccccccCCCCCCHHHHHHhhhhcCCC
Q 044049           39 SGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----NFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAIS  113 (139)
Q Consensus        39 ~~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~  113 (139)
                      +.+|++++..|.||++|++++   ..|++.||++++++++.     |++|+|+++++......+||.+||.+||++||++
T Consensus         1 AisC~~v~~~L~pCl~Yv~g~---~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~   77 (93)
T 2ljo_A            1 AISCGAVTSDLSPCLTYLTGG---PGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVN   77 (93)
T ss_dssp             CCSSHHHHHHHHHHHHHHTTS---SCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHhHHHHHcCC---CCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCC
Confidence            368999999999999999985   36999999999999764     6899999999866434479999999999999999


Q ss_pred             CCC----CCCCCC
Q 044049          114 APP----LKKCGV  122 (139)
Q Consensus       114 ~p~----~~~C~~  122 (139)
                      +|+    .++|+.
T Consensus        78 ~p~~Is~~~dC~~   90 (93)
T 2ljo_A           78 IPYKISTTTNCNT   90 (93)
T ss_dssp             CSSCCSTTCCGGG
T ss_pred             CCCCCCCCCCCCC
Confidence            983    346754

>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}

Probab=99.63  E-value=4.9e-17  Score=108.09  Aligned_cols=74  Identities=24%  Similarity=0.513  Sum_probs=62.5

Q ss_pred             CCCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCCC
Q 044049           39 SGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPP  116 (139)
Q Consensus        39 ~~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p~  116 (139)
                      ..+|++++.+|.||++|++++ ....|+++||++|++   .|+.|||.+++++....++||.++|+.||++||+++|+
T Consensus         2 ~~~C~~~~~~L~pC~~yv~~~-~~~~Ps~~CC~~lk~---~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~   75 (77)
T 2rkn_A            2 IDLCGMSQDELNECKPAVSKE-NPTSPSQPCCTALQH---ADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP   75 (77)
T ss_dssp             CCBTTBCHHHHHHHGGGGBSS-SCCCCCHHHHHHHTT---CCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCC
T ss_pred             cchHHhHHHhHhhCHHHHcCC-CCCCCCHHHHHHHHh---cCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCC
Confidence            367999999999999999974 246899999999998   47899999988642223479999999999999999875

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*

Probab=99.60  E-value=3.8e-16  Score=107.36  Aligned_cols=78  Identities=27%  Similarity=0.661  Sum_probs=61.4

Q ss_pred             CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----C--cccccccccccccCCC-CCCHHHHHHhhhhcC
Q 044049           40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----N--FHCICEAIKSSSDLGL-DLNLTRAFTLSSDCA  111 (139)
Q Consensus        40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~--~~CLC~~i~~~~~~~~-~in~~ra~~LP~~Cg  111 (139)
                      .+|++++..|.||++|+++++  ..|++.||++++++++.     |  ..|+|  ++.... ++ +||.++|++||++||
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~--~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~~~~~~-~~~~in~~~A~~LP~~C~   76 (93)
T 1afh_A            2 ISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAA-GVSGLNAGNAASIPSKCG   76 (93)
T ss_dssp             CSSHHHHHHHGGGHHHHTTSC--CSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--HHHHHT-TSTTCCHHHHHHHHHHHH
T ss_pred             CChHHHHHhccCcHHHHcCCC--CCChHHHHHHHHHHHHhhcCCCCCcccCEe--eccccc-cccCcCHHHHHHHHHHcC
Confidence            579999999999999999863  57999999999999742     3  35666  443322 33 799999999999999


Q ss_pred             CCCCC----CCCCCC
Q 044049          112 ISAPP----LKKCGV  122 (139)
Q Consensus       112 v~~p~----~~~C~~  122 (139)
                      +++|+    ..+|+.
T Consensus        77 v~~p~~is~~~dC~~   91 (93)
T 1afh_A           77 VSIPYTISTSTDCSR   91 (93)
T ss_dssp             CCCSSCCSTTCCSSS
T ss_pred             CCCCCCCCCCCCCcc
Confidence            99885    246754

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*

Probab=99.58  E-value=3.7e-16  Score=107.23  Aligned_cols=72  Identities=26%  Similarity=0.547  Sum_probs=59.4

Q ss_pred             CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhc-------cCcccccccccccccCCCCCCHHHHHHhhhhcCC
Q 044049           40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIK-------SNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAI  112 (139)
Q Consensus        40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~-------~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv  112 (139)
                      .+|++++..|.||++|+++++   .|+++||++++++++       .+..|+|....... ++ +||.++|++||++||+
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~---~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~-~~-~in~~~A~~LP~~Cgv   76 (92)
T 2alg_A            2 ITCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSAS-VP-GVNPNNAAALPGKCGV   76 (92)
T ss_dssp             CCHHHHHHHHGGGHHHHHHCS---CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHH-ST-TCCHHHHHHHHHHTTC
T ss_pred             CChHHHHHhccCcHHHHcCCC---CCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccc-cC-ccChHHHHHHHHHcCC
Confidence            579999999999999999863   588999999999973       23679997543221 44 8999999999999999


Q ss_pred             CCCC
Q 044049          113 SAPP  116 (139)
Q Consensus       113 ~~p~  116 (139)
                      ++|+
T Consensus        77 ~~p~   80 (92)
T 2alg_A           77 SIPY   80 (92)
T ss_dssp             CCSS
T ss_pred             CCCC
Confidence            9885

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}

Probab=99.58  E-value=8.2e-16  Score=105.30  Aligned_cols=77  Identities=29%  Similarity=0.683  Sum_probs=61.3

Q ss_pred             CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----Cc--ccccccccccccCCC-CCCHHHHHHhhhhcC
Q 044049           40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----NF--HCICEAIKSSSDLGL-DLNLTRAFTLSSDCA  111 (139)
Q Consensus        40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~~--~CLC~~i~~~~~~~~-~in~~ra~~LP~~Cg  111 (139)
                      .+|++++..|.||++|+++++  . |++.||++++++++.     |+  .|+|  +++.. .++ +||.++|++||++||
T Consensus         1 i~C~~v~~~L~pCl~yv~~~~--~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~-~~~~~in~~~A~~LP~~Cg   74 (91)
T 1siy_A            1 MTCGQVQGNLAQCIGFLQKGG--V-VPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAA-GAVRGINPNNAEALPGKCG   74 (91)
T ss_dssp             CCTTTTHHHHHHHHHHHTSCS--C-CCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHT-TCCSSCCHHHHHHHHHHHT
T ss_pred             CCHHHHHHhccCcHHHHhCCC--C-CcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcc-cccCCcCHHHHHHHHHHcC
Confidence            369999999999999999863  3 999999999999754     44  5777  45543 244 799999999999999


Q ss_pred             CCCCC----CCCCCC
Q 044049          112 ISAPP----LKKCGV  122 (139)
Q Consensus       112 v~~p~----~~~C~~  122 (139)
                      +++|+    ..+|+.
T Consensus        75 v~~p~~is~~~dC~~   89 (91)
T 1siy_A           75 VNIPYKISTSTNCNS   89 (91)
T ss_dssp             CCCSSCSCTTSCSST
T ss_pred             CCCCCCCCCCCCCcc
Confidence            99885    246754

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}

Probab=99.56  E-value=1.3e-15  Score=104.37  Aligned_cols=76  Identities=32%  Similarity=0.749  Sum_probs=60.8

Q ss_pred             CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-------Cccccccccccccc-CCCCCCHHHHHHhhhhcC
Q 044049           40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-------NFHCICEAIKSSSD-LGLDLNLTRAFTLSSDCA  111 (139)
Q Consensus        40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-------~~~CLC~~i~~~~~-~~~~in~~ra~~LP~~Cg  111 (139)
                      .+|++++..|.||++|+++++  . |+ .||++++++++.       +..|+|  +++... ++ +||.++|++||++||
T Consensus         2 ~~C~~v~~~L~pCl~y~~~~~--~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~   74 (91)
T 1t12_A            2 ITCGQVTSNLAPCLAYLRNTG--P-LG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCG   74 (91)
T ss_dssp             CCHHHHHHHTHHHHHHHTTSS--C-CT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCT-TCCHHHHHHHHHHTT
T ss_pred             CChHHHHHhccCcHHHHcCCC--C-hH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccC-CcChhHHHHHHHHcC
Confidence            579999999999999999863  4 88 999999999764       246777  454432 33 899999999999999


Q ss_pred             CCCCC----CCCCCC
Q 044049          112 ISAPP----LKKCGV  122 (139)
Q Consensus       112 v~~p~----~~~C~~  122 (139)
                      +++|+    .++|+.
T Consensus        75 v~~p~~is~~~dC~~   89 (91)
T 1t12_A           75 VNIPYKISPSTDCSK   89 (91)
T ss_dssp             CCCSSCSSSSSCCTT
T ss_pred             CCCCCCCCCCCCCcc
Confidence            99885    246754

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*

Probab=99.55  E-value=1.2e-15  Score=104.41  Aligned_cols=71  Identities=27%  Similarity=0.673  Sum_probs=58.2

Q ss_pred             CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----C--cccccccccccccCCC-CCCHHHHHHhhhhcC
Q 044049           40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----N--FHCICEAIKSSSDLGL-DLNLTRAFTLSSDCA  111 (139)
Q Consensus        40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~--~~CLC~~i~~~~~~~~-~in~~ra~~LP~~Cg  111 (139)
                      .+|++++..|.||++|+++++  . |+++||++++++++.     |  ..|+|  +++... ++ +||.++|++||++||
T Consensus         1 i~C~~v~~~L~pCl~y~~~~~--~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~-~~~~in~~~A~~LP~~C~   74 (90)
T 1bwo_A            1 IDCGHVDSLVRPCLSYVQGGP--G-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIAR-GIHNLNEDNARSIPPKCG   74 (90)
T ss_dssp             CCHHHHHHHHGGGHHHHTTCS--C-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHT-TCTTCCHHHHHTHHHHHT
T ss_pred             CCHHHHHHhhcccHHHHcCCC--C-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchh-ccCCcCHHHHHHHHHHcC
Confidence            369999999999999999863  3 999999999999753     2  35777  555442 34 799999999999999


Q ss_pred             CCCCC
Q 044049          112 ISAPP  116 (139)
Q Consensus       112 v~~p~  116 (139)
                      +++|+
T Consensus        75 v~~p~   79 (90)
T 1bwo_A           75 VNLPY   79 (90)
T ss_dssp             CCCSS
T ss_pred             CCCCC
Confidence            99885

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*

Probab=99.41  E-value=4.4e-14  Score=91.67  Aligned_cols=61  Identities=23%  Similarity=0.577  Sum_probs=52.7

Q ss_pred             hcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCC
Q 044049           47 YNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAP  115 (139)
Q Consensus        47 ~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p  115 (139)
                      ..|.||++|++++   ..|+++||++|++.    ..|+|.++++.. ++..||.++|++||++||+++|
T Consensus         5 ~~L~pC~~~v~~~---~~Ps~~CC~~lk~~----~~ClC~~~k~~~-~~~~in~~~A~~Lp~~Cgv~~P   65 (67)
T 1n89_A            5 SQLAVCASAILSG---AKPSGECCGNLRAQ----QGCFCQYAKDPT-YGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             STTHHHHHHHTTC---CCCCHHHHHHHHHH----SSHHHHGGGCST-THHHHTCHHHHHHHHHHTSCCS
T ss_pred             hhcccCHHHHcCC---CCCCHHHHHhhCCC----CCCCCccccCcc-cccccCHHHHHHHHHHcCCCCC
Confidence            4789999999975   37999999999974    789999998764 3446999999999999999986

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1

Probab=99.39  E-value=2.9e-14  Score=93.03  Aligned_cols=64  Identities=28%  Similarity=0.607  Sum_probs=54.4

Q ss_pred             hcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCCCCCCCC
Q 044049           47 YNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAPPLKKCG  121 (139)
Q Consensus        47 ~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p~~~~C~  121 (139)
                      ..|.||++|++++   ..|+++||++|++.    ..|+|.++++.. +...||.++|++||++||+++|   +|+
T Consensus         6 ~~L~pC~~~v~~~---~~Ps~~CC~~lk~~----~~ClC~~~k~~~-~~~~in~~~A~~Lp~~Cgv~~P---~C~   69 (69)
T 1l6h_A            6 GQLTVCTGAIAGG---ARPTAACCSSLRAQ----QGCFCQFAKDPR-YGRYVNSPNARKAVSSCGIALP---TCH   69 (69)
T ss_dssp             TTHHHHHHHHTTC---CSTTHHHHHHHHHH----HHHHHHHTTCSS-HHHHTTTTTGGGCCCCCSSCSC---CCC
T ss_pred             hhcccCHHHHcCC---CCCCHHHHHhhCCC----CCCCCccccCcc-cccccCHHHHHHHHHHcCCCCC---CCC
Confidence            4789999999975   36999999999974    689999998754 3446999999999999999986   564

>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1

Probab=97.50  E-value=4.5e-05  Score=50.71  Aligned_cols=67  Identities=30%  Similarity=0.628  Sum_probs=53.8

Q ss_pred             cccccHHHhhCCCCCCCCChhHHHHHHhhhccCc-ccccccccccccCCCCCCHHHHHHh-hhhcCCCCCCCCCCC
Q 044049           48 NLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNF-HCICEAIKSSSDLGLDLNLTRAFTL-SSDCAISAPPLKKCG  121 (139)
Q Consensus        48 ~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~-~CLC~~i~~~~~~~~~in~~ra~~L-P~~Cgv~~p~~~~C~  121 (139)
                      +|.-|.+.+.+.   ..|...||+-++.+.+.|. .|||..++-   +++ +|....+++ -..||..+|++++|.
T Consensus        10 kLgvCanvL~g~---~~~~~~CC~Ll~GL~dleAAvCLCtaik~---Lgi-lnlpv~L~llln~Cgk~~P~gF~C~   78 (80)
T 1hyp_A           10 DLSICLNILGGS---LGTVDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGRSYPSNATCP   78 (80)
T ss_dssp             CCGGGGGGGGTC---CTTHHHHHHHHHTSCHHHHHHHHHHHHHH---HTC-SCHHHHHHHHHHHTTCSSCCCCCCS
T ss_pred             chhHHHHHhCcC---CCCCCccchhhhCcchhhhhhhhhhhccc---cce-eecChhHHHHHHHhCCcCcCCCCCC
Confidence            688899988542   2467889999999987764 799999982   566 788878884 678999999999995

>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}

Probab=94.25  E-value=0.0041  Score=52.24  Aligned_cols=54  Identities=22%  Similarity=0.586  Sum_probs=37.2

Q ss_pred             hhHHHHHHhhhccCccccccccccccc--CC-------CCCCHHHHHHhhhhcCCCCCCCCCCCCC
Q 044049           67 SNCCSGFESVIKSNFHCICEAIKSSSD--LG-------LDLNLTRAFTLSSDCAISAPPLKKCGVP  123 (139)
Q Consensus        67 ~~CC~alk~l~~~~~~CLC~~i~~~~~--~~-------~~in~~ra~~LP~~Cgv~~p~~~~C~~~  123 (139)
                      .+||+.|+++- .+++|-|..|+....  .+       ...=..+|..||..||+..|  ..|..+
T Consensus       429 ~~cc~~l~~~~-~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~--~~c~~~  491 (500)
T 3ob4_A          429 ERCCNELNEFE-NNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAP--QRCDLD  491 (500)
T ss_dssp             HHHHHHHGGGT-TCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCC--SCCCCC
T ss_pred             HHHHHHHHhCC-cccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCC--ccCCcc
Confidence            78999999982 127999999876432  00       01114559999999999854  368754

>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3

Probab=92.63  E-value=0.37  Score=32.92  Aligned_cols=73  Identities=21%  Similarity=0.451  Sum_probs=50.8

Q ss_pred             CCCCHhhhh--c-ccccHHHhhCCC----CC------CCCChhHHHHHHhhhccCccccccccccccc--CC---CCCCH
Q 044049           39 SGDCSEVIY--N-LSDCLDFLSKGS----NH------TKPGSNCCSGFESVIKSNFHCICEAIKSSSD--LG---LDLNL  100 (139)
Q Consensus        39 ~~~C~~~~~--~-L~pCl~yl~~~~----~~------~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~--~~---~~in~  100 (139)
                      ...|...+.  + |.+|..|+....    +.      ...-..||+.|+.+   +..|-|..|+....  +.   ..-..
T Consensus         8 ~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~---~~~CrC~al~~~~Q~q~~g~q~~~~~   84 (103)
T 1s6d_A            8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM   84 (103)
T ss_dssp             SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred             CcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhc---CcccCcHHHHHHHHHHhcchhHHHHH
Confidence            466988863  4 899999997421    00      12358899999997   78999999976442  11   01234


Q ss_pred             HHHHHhhhhcCCCC
Q 044049          101 TRAFTLSSDCAISA  114 (139)
Q Consensus       101 ~ra~~LP~~Cgv~~  114 (139)
                      .+|..||..||+..
T Consensus        85 q~A~~LP~~C~i~p   98 (103)
T 1s6d_A           85 SMAHNLPIECNLMS   98 (103)
T ss_dssp             HHHHHHHHHTTSSS
T ss_pred             HHHHhcHHhcCCCc
Confidence            56788999999973

>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}

Probab=90.15  E-value=0.061  Score=37.04  Aligned_cols=75  Identities=19%  Similarity=0.482  Sum_probs=47.1

Q ss_pred             CHhhhhc---ccccHHHhhC----CCCCCC-------C--ChhHHHHHHhhhccCccccccccccccc-------CCC--
Q 044049           42 CSEVIYN---LSDCLDFLSK----GSNHTK-------P--GSNCCSGFESVIKSNFHCICEAIKSSSD-------LGL--   96 (139)
Q Consensus        42 C~~~~~~---L~pCl~yl~~----~~~~~~-------P--s~~CC~alk~l~~~~~~CLC~~i~~~~~-------~~~--   96 (139)
                      |...+..   |.+|..|+..    ++....       +  -..||+.|+.+   +..|-|..|+....       ++-  
T Consensus         5 C~~q~q~~q~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v---~~qCrC~al~~~v~~~~~qgq~~~~~   81 (109)
T 1sm7_A            5 CQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQ   81 (109)
T ss_dssp             HHTTHHHHCCCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTT---CHHHHTTTTHHHHHTSSCSSCCCTTH
T ss_pred             hHHHHHcCccHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhc---CccCCCHHHHHHHHHHHHhcccchHH
Confidence            4444443   8999999963    111012       1  36899999997   78999999876431       010  


Q ss_pred             -CCCHHHHHHhhhhcCCCCCCCCCCC
Q 044049           97 -DLNLTRAFTLSSDCAISAPPLKKCG  121 (139)
Q Consensus        97 -~in~~ra~~LP~~Cgv~~p~~~~C~  121 (139)
                       .-...+|..||..||+..+  ..|.
T Consensus        82 ~~~~~~~a~~LP~~Cnl~~~--~~C~  105 (109)
T 1sm7_A           82 STRIYQIAKNLPNVCNMKQI--GTCP  105 (109)
T ss_dssp             HHHHHHTTSSHHHHSCCCSS--CSSC
T ss_pred             HHHHHHHHHhCHHhcCCCCC--CCCC
Confidence             0123346679999999743  3464

>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3

Probab=88.93  E-value=0.27  Score=34.81  Aligned_cols=71  Identities=31%  Similarity=0.585  Sum_probs=48.9

Q ss_pred             CCCCHhhh--hcccccHHHhhCCC-CC-------CCC-----------ChhHHHHHHhhhccCccccccccccccc----
Q 044049           39 SGDCSEVI--YNLSDCLDFLSKGS-NH-------TKP-----------GSNCCSGFESVIKSNFHCICEAIKSSSD----   93 (139)
Q Consensus        39 ~~~C~~~~--~~L~pCl~yl~~~~-~~-------~~P-----------s~~CC~alk~l~~~~~~CLC~~i~~~~~----   93 (139)
                      ...|...+  ..|.+|..|+.... ..       ..|           -..||+.|+.+   ++.|-|..|+....    
T Consensus        15 ~q~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~---~~~C~C~aL~~~v~~~~q   91 (125)
T 1psy_A           15 SQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQ   91 (125)
T ss_dssp             SSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhc---CcccccHHHHHHHHHHHH
Confidence            45798887  46999999997521 00       012           26799999987   89999999965441    


Q ss_pred             ---CC-CC--CCHHHHHHhhhhcCC
Q 044049           94 ---LG-LD--LNLTRAFTLSSDCAI  112 (139)
Q Consensus        94 ---~~-~~--in~~ra~~LP~~Cgv  112 (139)
                         +. --  =-..+|..||..||+
T Consensus        92 Qgq~~gqq~~~~~q~A~~LP~~C~i  116 (125)
T 1psy_A           92 QGQLHGEESERVAQRAGEIVSSCGV  116 (125)
T ss_dssp             HTTCCTTCSHHHHHHHHHHHHHHTC
T ss_pred             HhhhhHHHHHHHHHHHHhhHHHcCC
Confidence               11 11  124567789999999

>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}

Probab=85.24  E-value=0.88  Score=32.22  Aligned_cols=82  Identities=21%  Similarity=0.520  Sum_probs=54.2

Q ss_pred             CCCCCHhhh--hcccccHHHhhCCCCCC--------CC-------ChhHHHHHHhhhccCccccccccccccc---CCC-
Q 044049           38 PSGDCSEVI--YNLSDCLDFLSKGSNHT--------KP-------GSNCCSGFESVIKSNFHCICEAIKSSSD---LGL-   96 (139)
Q Consensus        38 ~~~~C~~~~--~~L~pCl~yl~~~~~~~--------~P-------s~~CC~alk~l~~~~~~CLC~~i~~~~~---~~~-   96 (139)
                      ....|...+  ..|.+|..|+.......        .-       -..||+.|+.+. +++.|-|..|+....   ..+ 
T Consensus        12 ~~qqC~qq~q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~-~~~qCrCeaL~q~~Q~qq~q~~   90 (127)
T 1w2q_A           12 DSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQ   90 (127)
T ss_dssp             TTCCHHHHHTTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTS-CCCTTHHHHHHHHHHHSCTTTT
T ss_pred             cccccHHHHHHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhc-cCCCccCHHHHHHHHHHHhhhh
Confidence            356798876  46999999997421000        11       267999999963 368999999976541   111 


Q ss_pred             --CCC---HHHHHHhhhhcCCCCCCCCCCCC
Q 044049           97 --DLN---LTRAFTLSSDCAISAPPLKKCGV  122 (139)
Q Consensus        97 --~in---~~ra~~LP~~Cgv~~p~~~~C~~  122 (139)
                        -..   ..+|..||..|++.-|  ..|..
T Consensus        91 gqq~~~~~~q~A~~LP~~C~i~~~--~~C~~  119 (127)
T 1w2q_A           91 DRQMVQQFKRELMSLPQQCNFRAP--QRCDL  119 (127)
T ss_dssp             TSTTHHHHHHHHHHHHHHHTCCCS--SCCSC
T ss_pred             hHHHHHHHHHHHHHhHHhcCCCCC--CcCCC
Confidence              122   4568889999999533  35764

>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}

Probab=84.32  E-value=0.29  Score=31.37  Aligned_cols=52  Identities=19%  Similarity=0.437  Sum_probs=36.8

Q ss_pred             ChhHHHHHHhhhccCccccccccccccc-----CC-C-----CCCHHHHHHhhhhcCCCCCCCCCCCC
Q 044049           66 GSNCCSGFESVIKSNFHCICEAIKSSSD-----LG-L-----DLNLTRAFTLSSDCAISAPPLKKCGV  122 (139)
Q Consensus        66 s~~CC~alk~l~~~~~~CLC~~i~~~~~-----~~-~-----~in~~ra~~LP~~Cgv~~p~~~~C~~  122 (139)
                      -..||+.|+.+   +..|-|..|+....     -. .     .=...+|..||..||+..+  ..|..
T Consensus         7 ~qqCC~eL~~~---~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~--~~C~~   69 (72)
T 2ds2_B            7 LRQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNI--GACPF   69 (72)
T ss_dssp             HHHHHHHHTTS---CGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTC--CCCCC
T ss_pred             HHHHHHHHHhc---CccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCC--CcCCC
Confidence            36799999987   89999999876541     00 0     1245678889999999743  35653

>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3

Probab=82.10  E-value=0.15  Score=32.88  Aligned_cols=54  Identities=19%  Similarity=0.399  Sum_probs=36.9

Q ss_pred             CCChhHHHHHHhhhccCccccccccccccc-------CCC---CCCHHHHHHhhhhcCCCCCCCCCCCC
Q 044049           64 KPGSNCCSGFESVIKSNFHCICEAIKSSSD-------LGL---DLNLTRAFTLSSDCAISAPPLKKCGV  122 (139)
Q Consensus        64 ~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~-------~~~---~in~~ra~~LP~~Cgv~~p~~~~C~~  122 (139)
                      ..-..||+.|+.+   +..|-|..|+....       ++-   .-...+|..||..||+..+  ..|..
T Consensus         9 ~~~qqCC~qL~~~---~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~--~~C~~   72 (75)
T 1pnb_B            9 WLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI--GTCPF   72 (75)
T ss_dssp             SCTHHHHHHHHTS---CGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT--CCCCC
T ss_pred             HHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC--CCCCc
Confidence            4457899999997   78999999876431       111   1124556679999999743  35653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	139
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	7e-12
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	1e-10

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 55.6 bits (134), Expect = 7e-12
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVI-----KSNFHCICEAIKSSSDLG 95
           +C +V   +  CL ++  G     P   CC+G   +        +   +C  +K  +   
Sbjct: 2   NCGQVDSKMKPCLTYVQGGP---GPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGI 58

Query: 96  LDLNLTRAFTLSSDCAISAP 115
            +LNL  A ++ S C ++ P
Sbjct: 59  HNLNLNNAASIPSKCNVNVP 78

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 52.6 bits (126), Expect = 1e-10
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 41  DCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVI-----KSNFHCICEAIKSSSDLG 95
            C +V   ++ C+ +     +   P + CCSG  S+       ++    C  +K+++   
Sbjct: 3   SCGQVASAIAPCISYARGQGS--GPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGV 60

Query: 96  LDLNLTRAFTLSSDCAISAP 115
             LN   A ++ S C +S P
Sbjct: 61  SGLNAGNAASIPSKCGVSIP 80

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	139
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.73
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.71
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	99.06
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	98.95
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	97.02
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	92.94
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	92.37
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	90.31

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.73  E-value=4.8e-19  Score=120.36  Aligned_cols=82  Identities=23%  Similarity=0.531  Sum_probs=69.1

Q ss_pred             CCCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----CcccccccccccccCCCCCCHHHHHHhhhhcCCC
Q 044049           39 SGDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----NFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAIS  113 (139)
Q Consensus        39 ~~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~  113 (139)
                      +.+|.+++..|.||++|+++++  ..|++.||++++++++.     |++|+|++|++......+||.+|+.+||+.||++
T Consensus         1 Ai~C~~v~~~l~pCl~Yltg~~--~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~~~~in~~ra~~LP~~C~v~   78 (93)
T d1fk5a_           1 AISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CCCHHHHHHHHGGGHHHHTTCS--SSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHhhhhHHHHhCCC--CCCCCchhHHHHHHHHHccCCccHHHHHHhhhhcccccCCcCHHHHHhhhHhcCCC
Confidence            3689999999999999999863  67999999999999863     7899999998865433489999999999999999


Q ss_pred             CCC----CCCCCC
Q 044049          114 APP----LKKCGV  122 (139)
Q Consensus       114 ~p~----~~~C~~  122 (139)
                      +++    .++|++
T Consensus        79 l~~pis~~~dCs~   91 (93)
T d1fk5a_          79 IPYTISTSTDCSR   91 (93)
T ss_dssp             CSSCCSTTCCGGG
T ss_pred             CCCCCCCCCCCCc
Confidence            884    356754

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.71  E-value=1.1e-18  Score=118.16  Aligned_cols=80  Identities=24%  Similarity=0.573  Sum_probs=67.4

Q ss_pred             CCCHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhcc-----CcccccccccccccCCCCCCHHHHHHhhhhcCCCC
Q 044049           40 GDCSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKS-----NFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISA  114 (139)
Q Consensus        40 ~~C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~-----~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~  114 (139)
                      .+|++++..|.||++|++++   ..|++.||++++++++.     |++|+|+++++......+||.+||.+||++||+++
T Consensus         1 i~C~~v~~~l~pCl~Yl~g~---~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~~~~~in~~ra~~LP~~C~v~~   77 (91)
T d1mida_           1 LNCGQVDSKMKPCLTYVQGG---PGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNV   77 (91)
T ss_dssp             CCHHHHHHHHGGGHHHHTTC---SCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHhhHHHHcCC---CCCCcchhhhHHHHHHHhcCCCcHHHHHHhhhhhcccCCCcCHHHHHhchHhcCCCC
Confidence            37999999999999999975   36999999999999764     67899999998654334799999999999999999


Q ss_pred             CC----CCCCCC
Q 044049          115 PP----LKKCGV  122 (139)
Q Consensus       115 p~----~~~C~~  122 (139)
                      |+    .++|++
T Consensus        78 p~pis~~~dC~~   89 (91)
T d1mida_          78 PYTISPDIDCSR   89 (91)
T ss_dssp             CSCCCTTCCGGG
T ss_pred             CCCCCCCCCCCC
Confidence            83    346754

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=99.06  E-value=2e-11  Score=77.48  Aligned_cols=61  Identities=23%  Similarity=0.588  Sum_probs=54.4

Q ss_pred             hcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCC
Q 044049           47 YNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAP  115 (139)
Q Consensus        47 ~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p  115 (139)
                      .+|.+|++.++++   ..||+.||+-+|+    +..|||++++++. +...||..+|..+.+.|||++|
T Consensus         5 ~~L~~C~~Ai~~g---~~PS~~CC~kLke----Q~~ClC~Y~kdP~-~~~yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           5 SQLAVCASAILSG---AKPSGECCGNLRA----QQGCFCQYAKDPT-YGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             GGGGGGHHHHHHC---CCCCHHHHHHHHH----HGGGHHHHTTCTT-THHHHTSHHHHHHHHHTTCCCC
T ss_pred             hhccccHHHHhcC---CCCcHHHHHHHHh----cCCccceecCCcc-HHHHcCCHHHHHHHHhcCCCCC
Confidence            3799999999986   4899999999998    5689999999876 5667999999999999999987

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=98.95  E-value=2.3e-11  Score=77.61  Aligned_cols=64  Identities=28%  Similarity=0.630  Sum_probs=55.4

Q ss_pred             CHhhhhcccccHHHhhCCCCCCCCChhHHHHHHhhhccCcccccccccccccCCCCCCHHHHHHhhhhcCCCCC
Q 044049           42 CSEVIYNLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNFHCICEAIKSSSDLGLDLNLTRAFTLSSDCAISAP  115 (139)
Q Consensus        42 C~~~~~~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~~~~~in~~ra~~LP~~Cgv~~p  115 (139)
                      |..  ..|.+|++.++++   ..||+.||+-+|+    +..|||++++++. ++..||..++..+...|||++|
T Consensus         3 C~p--~~L~~C~~ai~~g---~~PS~~CC~kLke----Q~~ClC~Y~k~P~-~~~yv~spnarkv~~aCgvp~P   66 (69)
T d1l6ha_           3 CNA--GQLTVCTGAIAGG---ARPTAACCSSLRA----QQGCFCQFAKDPR-YGRYVNSPNARKAVSSCGIALP   66 (69)
T ss_dssp             STT--TTHHHHHHHHTTC---CSTTHHHHHHHHH----HHHHHHHHTTCSS-HHHHTTTTTGGGCCCCCSSCSC
T ss_pred             CCh--hhccccHHHHhCC---CCCcHHHHHHHHh----cCCccceeccCcc-HHHHcCCHHHHHHHHhcCCCCC
Confidence            554  3799999999986   4799999999998    4689999999876 5657999999999999999997

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=97.02  E-value=0.00019  Score=45.54  Aligned_cols=68  Identities=26%  Similarity=0.573  Sum_probs=52.2

Q ss_pred             cccccHHHhhCCCCCCCCChhHHHHHHhhhccCc-ccccccccccccCCCCCCHHHHHH-hhhhcCCCCCCCCCCCC
Q 044049           48 NLSDCLDFLSKGSNHTKPGSNCCSGFESVIKSNF-HCICEAIKSSSDLGLDLNLTRAFT-LSSDCAISAPPLKKCGV  122 (139)
Q Consensus        48 ~L~pCl~yl~~~~~~~~Ps~~CC~alk~l~~~~~-~CLC~~i~~~~~~~~~in~~ra~~-LP~~Cgv~~p~~~~C~~  122 (139)
                      ++.-|.+.+.+.   ..+...||.-++.+.+.|. .|||..|+..   ++ +|....+. |-..||...|++++|.+
T Consensus         5 Klg~C~nvLg~~---~~~~~~CC~Ll~GL~dleAAvCLCtaika~---~l-lnvpv~l~llln~Cgk~~P~gF~CP~   74 (75)
T d1hypa_           5 DLSICLNILGGS---LGTVDDCCALIGGLGDIEAIVCLCIQLRAL---GI-LNLNRNLQLILNSCGRSYPSNATCPR   74 (75)
T ss_dssp             CCGGGGGGGGTC---CTTHHHHHHHHHTSCHHHHHHHHHHHHHHH---TC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             chhhHHHHhcCc---cCCCCCcchHHhhHHHHHHHHHHHHHHHHh---hh-ccccchHHHHHHHcCCcCcCCCcCCC
Confidence            566788877653   3566889999999987764 7999999852   33 66776666 46689999999999953

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=92.37  E-value=0.036  Score=37.73  Aligned_cols=74  Identities=31%  Similarity=0.593  Sum_probs=50.1

Q ss_pred             CCCCHhhhh--cccccHHHhhCCCCCCC--------CC-----------hhHHHHHHhhhccCccccccccccccc----
Q 044049           39 SGDCSEVIY--NLSDCLDFLSKGSNHTK--------PG-----------SNCCSGFESVIKSNFHCICEAIKSSSD----   93 (139)
Q Consensus        39 ~~~C~~~~~--~L~pCl~yl~~~~~~~~--------Ps-----------~~CC~alk~l~~~~~~CLC~~i~~~~~----   93 (139)
                      ...|...+-  .|..|..||........        +.           ..||+.|+.+   +..|-|..|+....    
T Consensus        15 ~q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~~~q   91 (125)
T d1psya_          15 SQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQIQ   91 (125)
T ss_dssp             SSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHHH
T ss_pred             cccCHHHHHhhhHHHHHHHHHHHHhccCCCCcccccccccccccccHHHHHHHHHHHhC---CcCCcCHHHHHHHHHHHH
Confidence            567887643  69999999974311000        00           4699999997   89999999876432    


Q ss_pred             -CCC-CC----CHHHHHHhhhhcCCCCC
Q 044049           94 -LGL-DL----NLTRAFTLSSDCAISAP  115 (139)
Q Consensus        94 -~~~-~i----n~~ra~~LP~~Cgv~~p  115 (139)
                       ..+ .-    -..+|..||..||+...
T Consensus        92 q~~~~~~~~~~~~q~Ak~LPs~C~i~~~  119 (125)
T d1psya_          92 QGQLHGEESERVAQRAGEIVSSCGVRCM  119 (125)
T ss_dssp             HTTCCTTCSHHHHHHHHHHHHHHTCSTT
T ss_pred             HHHHHHHHHHHHHHHHHhChhhcCCcch
Confidence             111 11    15678899999999853

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=90.31  E-value=0.038  Score=36.50  Aligned_cols=73  Identities=21%  Similarity=0.469  Sum_probs=49.9

Q ss_pred             CCCCHhhhh---cccccHHHhhCC-----CC----CC-CCChhHHHHHHhhhccCccccccccccccc--CCC---CCCH
Q 044049           39 SGDCSEVIY---NLSDCLDFLSKG-----SN----HT-KPGSNCCSGFESVIKSNFHCICEAIKSSSD--LGL---DLNL  100 (139)
Q Consensus        39 ~~~C~~~~~---~L~pCl~yl~~~-----~~----~~-~Ps~~CC~alk~l~~~~~~CLC~~i~~~~~--~~~---~in~  100 (139)
                      ...|...+.   .|..|..|+...     ..    .- .--..||+.|+++   ++.|-|..|.....  ..-   .--.
T Consensus         8 ~q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q~~q~~~~~~~   84 (103)
T d1s6da_           8 ESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVM   84 (103)
T ss_dssp             SSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHHH
T ss_pred             cccCHHHHHHhHhHHHHHHHHHHHHhccCCCCCccCchHHHHHHHHHHHcC---CCCCcCHHHHHHHHHHHhHHHHHHHH
Confidence            457886654   699999999531     00    11 1227899999997   89999999876543  111   1224


Q ss_pred             HHHHHhhhhcCCCC
Q 044049          101 TRAFTLSSDCAISA  114 (139)
Q Consensus       101 ~ra~~LP~~Cgv~~  114 (139)
                      ..|..||..||+..
T Consensus        85 q~Ak~LPs~C~i~P   98 (103)
T d1s6da_          85 SMAHNLPIECNLMS   98 (103)
T ss_dssp             HHHHHHHHHTTSSS
T ss_pred             HHHHhChHhcCCCC
Confidence            56888999999983