Citrus Sinensis ID: 044093

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------
MSSSLSGSDNQNAETRRAGLPSVREKNFELMDSLYKAAVEGHTDQFRAHAQMLDQILTPNENTILHVHITARPDQTMRPNNELKSSLWMMMSTLKKQSSSSEHFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCSAEDIICSDKLLFGPNE
cccccccccHHHHHHHHcccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHccccccHHHHHHccccccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccHHHHHHHHccccccccccccccccccHHHHHHHcccHHHHHHHcccccccccccccccHHHHHHHccccccccc
ccHHHccccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHHHcccccccccccccccHHHHEHHcccEccccc
mssslsgsdnqnaetrraglpsvreKNFELMDSLYKAAVEGHTDQFRAHAQMLDQiltpnentiLHVHItarpdqtmrpnneLKSSLWMMMSTLkkqsssseHFVRGILEMCPglllkantkgETLLHIAARHGHADIVKDLIAEckkphqndpekGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLtkedpslpydannagetplYLAAERGYINVVEDIIStckspadhgpmgrtashaaafceDTEMTKVLLSskgtltskpdqhgwlplHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRscpsscelvddrgwNVFHFALHSGSRRTVELLLkspslgnlvneknddgntpllehavsgsfiqsfvchpkvdrlafnhhncsaediicsdkllfgpne
mssslsgsdnqnaetrraglpsvreKNFELMDSLYKAAVEGHTDQFRAHAQMLDQILTPNENTILHVHitarpdqtmrpNNELKSSLWMMMSTLKKQSSSSEHFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEdpslpydannaGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCsaediicsdkllfgpne
MSSSLSGSDNQNAETRRAGLPSVREKNFELMDSLYKAAVEGHTDQFRAHAQMLDQILTPNENTILHVHITARPDQTMRPNNELKSSLWMMMSTLKKQSSSSEHFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCSAEDIICSDKLLFGPNE
*****************************LMDSLYKAAVEGHTDQFRAHAQMLDQILTPNENTILHVHITA*******************************HFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAEC**************************DTALHEAVRYNQVDVVKMLTK****LPYDANNAGETPLYLAAERGYINVVEDIISTCK***************AAFCEDTEMTKVLL**********DQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKS**LG*L**********PLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCSAEDIICSDKLLF****
********************PSVREKNFELMDSLYKAAVEGHTDQFRAHAQMLDQILTPNENTILHVHITARPDQTMRPNNELKSSLWMMMSTLKKQSSSSEHFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCSAEDIICS**L******
*******************LPSVREKNFELMDSLYKAAVEGHTDQFRAHAQMLDQILTPNENTILHVHITARPDQTMRPNNELKSSLWMMMST*********HFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCSAEDIICSDKLLFGPNE
MSSSLSGSDNQNAETRRAGLPSVREKNFELMDSLYKAAVEGHTDQFRAHAQMLDQILTPNENTILHVHITARPDQTMRPNNELKSSLWMMMSTLKKQSSSSEHFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPH***PEKGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCSAEDIICSDKLLF****
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MSSSLSGSDNQNAETRRAGLPSVREKNFELMDSLYKAAVEGHTDQFRAHAQMLDQILTPNENTILHVHITARPDQTMRPNNELKSSLWMMMSTLKKQSSSSEHFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCSAEDIICSDKLLFGPNE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query427 2.2.26 [Sep-21-2011]
Q6AWW5 524 Ankyrin repeat-containing no no 0.533 0.435 0.282 2e-18
Q9ERK0786 Receptor-interacting seri yes no 0.557 0.302 0.293 9e-16
P57078832 Receptor-interacting seri yes no 0.555 0.284 0.289 1e-15
P16157 1881 Ankyrin-1 OS=Homo sapiens no no 0.543 0.123 0.308 5e-15
G5E8K5 1961 Ankyrin-3 OS=Mus musculus no no 0.540 0.117 0.286 6e-15
Q8N6D5301 Ankyrin repeat domain-con no no 0.538 0.764 0.313 9e-15
Q8BZ25745 Ankyrin repeat and protei no no 0.548 0.314 0.268 1e-14
Q12955 4377 Ankyrin-3 OS=Homo sapiens no no 0.540 0.052 0.282 2e-14
Q01484 3957 Ankyrin-2 OS=Homo sapiens no no 0.505 0.054 0.3 3e-14
P53355 1430 Death-associated protein no no 0.437 0.130 0.324 4e-14
>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1 Back     alignment and function desciption
 Score = 93.6 bits (231), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 27/255 (10%)

Query: 115 LLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDT 174
           LL + N  GET L++AA +G+ D+VK L+      H +          ++ GT  +    
Sbjct: 48  LLAEQNQSGETALYVAAEYGYTDMVKILM-----KHSDS---------VLAGTKAKNGFD 93

Query: 175 ALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVV-------EDIIS 227
           A H A +   + V+ +L + +P L +  +++  T L+ AA +G+  +V        D+ +
Sbjct: 94  AFHIAAKNGNLQVLDVLIEANPELSFTFDSSKTTALHTAASQGHGEIVCFLLDKGVDLAA 153

Query: 228 TCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHY 287
             +S       G+TA H+AA    T + K L+  K  + ++ D+ G   LH+A       
Sbjct: 154 IARSN------GKTALHSAARNGHTVIVKKLIEKKAGMVTRVDKKGQTALHMAVKGQNTE 207

Query: 288 VVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHF 347
           +V  L++AD S    A+NKG  PLH+A    R   +Q +++ C  S   V+  G      
Sbjct: 208 IVDVLMEADGSLINSADNKGNTPLHIAVRKNRAEIVQTVLKYCEVSRVAVNKSGETALDI 267

Query: 348 ALHSGSRRTVELLLK 362
           A  +G    V LL K
Sbjct: 268 AEKTGLHEIVPLLQK 282

Arabidopsis thaliana (taxid: 3702)
>sp|Q9ERK0|RIPK4_MOUSE Receptor-interacting serine/threonine-protein kinase 4 OS=Mus musculus GN=Ripk4 PE=1 SV=2 Back     alignment and function description
>sp|P57078|RIPK4_HUMAN Receptor-interacting serine/threonine-protein kinase 4 OS=Homo sapiens GN=RIPK4 PE=1 SV=1 Back     alignment and function description
>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3 Back     alignment and function description
>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1 Back     alignment and function description
>sp|Q8N6D5|ANR29_HUMAN Ankyrin repeat domain-containing protein 29 OS=Homo sapiens GN=ANKRD29 PE=2 SV=2 Back     alignment and function description
>sp|Q8BZ25|ANKK1_MOUSE Ankyrin repeat and protein kinase domain-containing protein 1 OS=Mus musculus GN=Ankk1 PE=2 SV=1 Back     alignment and function description
>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3 Back     alignment and function description
>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4 Back     alignment and function description
>sp|P53355|DAPK1_HUMAN Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=6 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query427
255551947 582 ankyrin repeat-containing protein, putat 0.906 0.664 0.408 7e-76
147772498 708 hypothetical protein VITISV_032148 [Viti 0.843 0.508 0.421 2e-75
255585399 575 ankyrin repeat-containing protein, putat 0.838 0.622 0.433 2e-75
225432914 596 PREDICTED: ankyrin repeat-containing pro 0.918 0.657 0.405 2e-74
224127104405 predicted protein [Populus trichocarpa] 0.782 0.824 0.452 3e-71
356510752 629 PREDICTED: ankyrin-2-like [Glycine max] 0.882 0.599 0.384 1e-70
224127098399 predicted protein [Populus trichocarpa] 0.775 0.829 0.453 2e-70
224127079394 predicted protein [Populus trichocarpa] 0.754 0.817 0.427 9e-68
224127106 575 predicted protein [Populus trichocarpa] 0.754 0.56 0.421 3e-66
147805917 561 hypothetical protein VITISV_002766 [Viti 0.838 0.638 0.417 2e-64
>gi|255551947|ref|XP_002517018.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223543653|gb|EEF45181.1| ankyrin repeat-containing protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  290 bits (743), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 172/421 (40%), Positives = 243/421 (57%), Gaps = 34/421 (8%)

Query: 1   MSSSLSGSDNQNAETRRAGLPSVREKNFELMDS-LYKAAVEGHTDQFRAHAQMLDQILTP 59
           MS   S  D+ +  T    L S + ++   MD+ LYKAAVE + +  + +A+ LD  +TP
Sbjct: 22  MSYCSSIDDDDHDTTEIPDLDS-KTEDMAYMDAELYKAAVEENINSLKKYAKDLDLQVTP 80

Query: 60  NENTILHVHITARPDQTMRPNNELKSSLWMMMSTLKKQSSSSEHFVRGILEMCPGLLLKA 119
            +NTILH+H+ +       PN                    S  FV+  L++CP LL K 
Sbjct: 81  KKNTILHIHLNS-------PNKR------------------SVDFVKEALQLCPSLLWKN 115

Query: 120 NTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDTALHEA 179
           N+ G+  LHIAAR+GH DIVK L+ E  K    D E G  A + M    NE KD ALHEA
Sbjct: 116 NSNGDAPLHIAARYGHIDIVK-LLLEQAKAQNEDLETGRGAMKQMWQMQNEKKDMALHEA 174

Query: 180 VRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMG 239
            R N + VV++LT+ DP   Y AN+  ETPLYLAA RGY+ VV +I++TCKS A  GP G
Sbjct: 175 ARNNHLSVVRLLTRLDPHFLYPANDYEETPLYLAAARGYLYVVIEILNTCKSVAYGGPKG 234

Query: 240 RTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAY-----LGKHYVVKELLK 294
           +TA H A    +  +   +L  +  LT + +++GW PLH AAY      G + +V+ LL+
Sbjct: 235 KTALHGAVLSGNRGIVLEILKREKRLTIEAEENGWTPLHYAAYGNDQNFGAYVIVQRLLE 294

Query: 295 ADKSAAYKAN-NKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHFALHSGS 353
            DKSAAY  + ++ +  LHLAA  G +  M+E+I  CP  CE+ DDRGWNV H+A+ S +
Sbjct: 295 CDKSAAYVVDKDRKRTALHLAACRGNVRIMKEIISKCPDCCEIADDRGWNVLHYAVVSKN 354

Query: 354 RRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQSFVCHPKVDRLAFNHHNCSAE 413
              ++++L++ SL +LVN+++  GNTPL   AVS  ++ SFV   + D  AF   N  + 
Sbjct: 355 DEALQVILRNSSLIDLVNDRDAQGNTPLHLLAVSRPYLPSFVFDGEDDLNAFYKQNVLSR 414

Query: 414 D 414
           D
Sbjct: 415 D 415

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147772498|emb|CAN60780.1| hypothetical protein VITISV_032148 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255585399|ref|XP_002533395.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223526769|gb|EEF28995.1| ankyrin repeat-containing protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225432914|ref|XP_002280197.1| PREDICTED: ankyrin repeat-containing protein At2g01680-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224127104|ref|XP_002329397.1| predicted protein [Populus trichocarpa] gi|222870447|gb|EEF07578.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356510752|ref|XP_003524098.1| PREDICTED: ankyrin-2-like [Glycine max] Back     alignment and taxonomy information
>gi|224127098|ref|XP_002329394.1| predicted protein [Populus trichocarpa] gi|222870444|gb|EEF07575.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224127079|ref|XP_002329386.1| predicted protein [Populus trichocarpa] gi|224127100|ref|XP_002329395.1| predicted protein [Populus trichocarpa] gi|222870436|gb|EEF07567.1| predicted protein [Populus trichocarpa] gi|222870445|gb|EEF07576.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224127106|ref|XP_002329398.1| predicted protein [Populus trichocarpa] gi|222870448|gb|EEF07579.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147805917|emb|CAN69800.1| hypothetical protein VITISV_002766 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query427
TAIR|locus:2020833 616 AT1G03670 "AT1G03670" [Arabido 0.632 0.438 0.322 9e-31
TAIR|locus:2128781 677 AT4G03460 "AT4G03460" [Arabido 0.704 0.444 0.292 1.9e-28
TAIR|locus:2128791 683 AT4G03470 [Arabidopsis thalian 0.644 0.402 0.307 6.8e-28
TAIR|locus:2128771 641 AT4G03450 "AT4G03450" [Arabido 0.641 0.427 0.305 2.5e-27
TAIR|locus:2138391 572 AT4G05040 "AT4G05040" [Arabido 0.646 0.482 0.290 2.3e-24
TAIR|locus:2129685 694 AT4G14390 "AT4G14390" [Arabido 0.641 0.394 0.287 1.6e-21
TAIR|locus:2026489 543 AT1G07710 "AT1G07710" [Arabido 0.573 0.451 0.294 1.3e-18
TAIR|locus:2129690 670 ACD6 "AT4G14400" [Arabidopsis 0.679 0.432 0.253 1.7e-17
RGD|1305538773 Ankk1 "ankyrin repeat and kina 0.578 0.319 0.317 3.7e-17
UNIPROTKB|B7ZAU7721 RIPK4 "Receptor-interacting se 0.641 0.380 0.286 5.5e-17
TAIR|locus:2020833 AT1G03670 "AT1G03670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 345 (126.5 bits), Expect = 9.0e-31, P = 9.0e-31
 Identities = 92/285 (32%), Positives = 143/285 (50%)

Query:   103 HFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAAR 162
             H V  I+   P LL   N  GET LH+AAR G  +IV+ L+    +    D      AA+
Sbjct:    86 HIVEFIISTFPNLLQNVNLMGETTLHVAARAGSLNIVEILVRFITESSSYD---AFIAAK 142

Query:   163 LMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVV 222
                G      DTALH A++   V+V   L      + +D NN   +PLY+A E GY  +V
Sbjct:   143 SKNG------DTALHAALKGKHVEVAFCLVSVKHDVSFDKNNDEASPLYMAVEAGYHELV 196

Query:   223 EDIISTCKSPADHGPM--GRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLA 280
               ++ +  SP+    M  G++  HAA      ++  ++L     L    ++ G   L   
Sbjct:   197 LKMLESSSSPSILASMFSGKSVIHAAMKANRRDILGIVLRQDPGLIELRNEEGRTCLSYG 256

Query:   281 A----YLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCEL 336
             A    Y G  Y++ E  KA  S  Y A++ G  P+H+AA  G +  ++E ++ CP S EL
Sbjct:   257 ASMGCYEGIRYILAEFDKAASSLCYVADDDGFTPIHMAAKEGHVRIIKEFLKHCPDSREL 316

Query:   337 VDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPL 381
             ++++  N+FH A  +G  + V+ LLK      ++NE++ +GNTPL
Sbjct:   317 LNNQCQNIFHVAAIAGKSKVVKYLLKLDEGKRMMNEQDINGNTPL 361
GO:0003674 "molecular_function" evidence=ND
GO:0005575 "cellular_component" evidence=ND
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2128781 AT4G03460 "AT4G03460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128791 AT4G03470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128771 AT4G03450 "AT4G03450" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138391 AT4G05040 "AT4G05040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129685 AT4G14390 "AT4G14390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026489 AT1G07710 "AT1G07710" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129690 ACD6 "AT4G14400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1305538 Ankk1 "ankyrin repeat and kinase domain containing 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B7ZAU7 RIPK4 "Receptor-interacting serine/threonine-protein kinase 4" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.01200031
hypothetical protein (405 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query427
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 3e-21
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 1e-20
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 7e-20
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 9e-20
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 3e-17
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 2e-12
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 9e-12
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 4e-10
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 2e-09
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 5e-08
COG0666235 COG0666, Arp, FOG: Ankyrin repeat [General functio 5e-08
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 1e-07
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 3e-07
PHA03100422 PHA03100, PHA03100, ankyrin repeat protein; Provis 4e-07
pfam1279691 pfam12796, Ank_2, Ankyrin repeats (3 copies) 2e-06
COG0666235 COG0666, Arp, FOG: Ankyrin repeat [General functio 2e-06
pfam1363754 pfam13637, Ank_4, Ankyrin repeats (many copies) 6e-06
pfam1363754 pfam13637, Ank_4, Ankyrin repeats (many copies) 2e-05
pfam1363754 pfam13637, Ank_4, Ankyrin repeats (many copies) 1e-04
PHA02875 413 PHA02875, PHA02875, ankyrin repeat protein; Provis 1e-04
COG0666235 COG0666, Arp, FOG: Ankyrin repeat [General functio 3e-04
cd00204126 cd00204, ANK, ankyrin repeats; ankyrin repeats med 4e-04
PHA02875413 PHA02875, PHA02875, ankyrin repeat protein; Provis 7e-04
pfam0002333 pfam00023, Ank, Ankyrin repeat 7e-04
PHA03100 422 PHA03100, PHA03100, ankyrin repeat protein; Provis 8e-04
pfam1363754 pfam13637, Ank_4, Ankyrin repeats (many copies) 0.002
pfam1363754 pfam13637, Ank_4, Ankyrin repeats (many copies) 0.003
PTZ00322 664 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct 0.003
PHA02876 682 PHA02876, PHA02876, ankyrin repeat protein; Provis 0.003
PHA02874434 PHA02874, PHA02874, ankyrin repeat protein; Provis 0.003
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information 
 Score = 88.6 bits (220), Expect = 3e-21
 Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 2/125 (1%)

Query: 203 NNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSK 262
           +  G TPL+LAA  G++ VV+ ++            GRT  H AA     E+ K+LL   
Sbjct: 4   DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG 63

Query: 263 GTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNT 322
             + ++ D+ G  PLHLAA  G   VVK LLK         +  G+ PLHLAA  G L  
Sbjct: 64  ADVNAR-DKDGNTPLHLAARNGNLDVVKLLLKHGAD-VNARDKDGRTPLHLAAKNGHLEV 121

Query: 323 MQELI 327
           ++ L+
Sbjct: 122 VKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional Back     alignment and domain information
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies) Back     alignment and domain information
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies) Back     alignment and domain information
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies) Back     alignment and domain information
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies) Back     alignment and domain information
>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional Back     alignment and domain information
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional Back     alignment and domain information
>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat Back     alignment and domain information
>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional Back     alignment and domain information
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies) Back     alignment and domain information
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies) Back     alignment and domain information
>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional Back     alignment and domain information
>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 427
PHA02876 682 ankyrin repeat protein; Provisional 100.0
PHA02946446 ankyin-like protein; Provisional 100.0
PHA02876 682 ankyrin repeat protein; Provisional 100.0
PHA02946446 ankyin-like protein; Provisional 100.0
KOG0510 929 consensus Ankyrin repeat protein [General function 100.0
PHA02730 672 ankyrin-like protein; Provisional 100.0
PHA02716 764 CPXV016; CPX019; EVM010; Provisional 100.0
PHA02874434 ankyrin repeat protein; Provisional 100.0
PHA02874 434 ankyrin repeat protein; Provisional 100.0
PHA02917 661 ankyrin-like protein; Provisional 100.0
KOG0510 929 consensus Ankyrin repeat protein [General function 100.0
PHA03095 471 ankyrin-like protein; Provisional 100.0
KOG4177 1143 consensus Ankyrin [Cell wall/membrane/envelope bio 100.0
PHA03100 480 ankyrin repeat protein; Provisional 100.0
PHA03095471 ankyrin-like protein; Provisional 100.0
PHA02716 764 CPXV016; CPX019; EVM010; Provisional 100.0
PHA02730 672 ankyrin-like protein; Provisional 100.0
PHA02878 477 ankyrin repeat protein; Provisional 100.0
PHA03100 480 ankyrin repeat protein; Provisional 100.0
PHA02878 477 ankyrin repeat protein; Provisional 100.0
PHA02917 661 ankyrin-like protein; Provisional 100.0
KOG4177 1143 consensus Ankyrin [Cell wall/membrane/envelope bio 100.0
PHA02989 494 ankyrin repeat protein; Provisional 100.0
KOG0508 615 consensus Ankyrin repeat protein [General function 100.0
PHA02989 494 ankyrin repeat protein; Provisional 100.0
PHA02875 413 ankyrin repeat protein; Provisional 100.0
PHA02791284 ankyrin-like protein; Provisional 100.0
PHA02791284 ankyrin-like protein; Provisional 100.0
PHA02798 489 ankyrin-like protein; Provisional 100.0
PHA02875 413 ankyrin repeat protein; Provisional 100.0
PHA02792 631 ankyrin-like protein; Provisional 100.0
KOG4412226 consensus 26S proteasome regulatory complex, subun 100.0
PHA02798 489 ankyrin-like protein; Provisional 100.0
KOG4412226 consensus 26S proteasome regulatory complex, subun 100.0
PHA02792 631 ankyrin-like protein; Provisional 100.0
KOG0508 615 consensus Ankyrin repeat protein [General function 100.0
KOG0509 600 consensus Ankyrin repeat and DHHC-type Zn-finger d 100.0
KOG0509 600 consensus Ankyrin repeat and DHHC-type Zn-finger d 99.97
PHA02859209 ankyrin repeat protein; Provisional 99.97
PHA02795 437 ankyrin-like protein; Provisional 99.96
PHA02859209 ankyrin repeat protein; Provisional 99.96
PHA02795437 ankyrin-like protein; Provisional 99.95
KOG4369 2131 consensus RTK signaling protein MASK/UNC-44 [Signa 99.95
KOG4369 2131 consensus RTK signaling protein MASK/UNC-44 [Signa 99.95
KOG0502296 consensus Integral membrane ankyrin-repeat protein 99.94
KOG0507 854 consensus CASK-interacting adaptor protein (caskin 99.93
KOG0507 854 consensus CASK-interacting adaptor protein (caskin 99.93
KOG0502296 consensus Integral membrane ankyrin-repeat protein 99.93
PLN03192 823 Voltage-dependent potassium channel; Provisional 99.92
TIGR00870 743 trp transient-receptor-potential calcium channel p 99.92
TIGR00870 743 trp transient-receptor-potential calcium channel p 99.91
PLN03192823 Voltage-dependent potassium channel; Provisional 99.91
KOG0505 527 consensus Myosin phosphatase, regulatory subunit [ 99.89
KOG0505 527 consensus Myosin phosphatase, regulatory subunit [ 99.88
KOG0514452 consensus Ankyrin repeat protein [General function 99.88
PHA02743166 Viral ankyrin protein; Provisional 99.87
PHA02743166 Viral ankyrin protein; Provisional 99.86
PHA02884300 ankyrin repeat protein; Provisional 99.86
KOG0514452 consensus Ankyrin repeat protein [General function 99.85
KOG0512228 consensus Fetal globin-inducing factor (contains a 99.85
PHA02741169 hypothetical protein; Provisional 99.84
PHA02741169 hypothetical protein; Provisional 99.84
PHA02736154 Viral ankyrin protein; Provisional 99.82
PHA02884300 ankyrin repeat protein; Provisional 99.81
PHA02736154 Viral ankyrin protein; Provisional 99.81
KOG0512228 consensus Fetal globin-inducing factor (contains a 99.79
KOG0195 448 consensus Integrin-linked kinase [Signal transduct 99.77
PF1279689 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 99.75
KOG0195 448 consensus Integrin-linked kinase [Signal transduct 99.74
cd00204126 ANK ankyrin repeats; ankyrin repeats mediate prote 99.71
KOG3676 782 consensus Ca2+-permeable cation channel OSM-9 and 99.71
PF1279689 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 99.7
KOG3676 782 consensus Ca2+-permeable cation channel OSM-9 and 99.69
cd00204126 ANK ankyrin repeats; ankyrin repeats mediate prote 99.68
COG0666235 Arp FOG: Ankyrin repeat [General function predicti 99.54
KOG4214117 consensus Myotrophin and similar proteins [Transcr 99.54
PF1385756 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 99.52
KOG4214117 consensus Myotrophin and similar proteins [Transcr 99.52
PF1385756 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 99.49
COG0666235 Arp FOG: Ankyrin repeat [General function predicti 99.47
PF1363754 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 99.42
PF1363754 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 99.41
PTZ00322 664 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas 99.4
KOG1710 396 consensus MYND Zn-finger and ankyrin repeat protei 99.32
PTZ00322 664 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas 99.28
KOG0515752 consensus p53-interacting protein 53BP/ASPP, conta 99.26
KOG1710396 consensus MYND Zn-finger and ankyrin repeat protei 99.25
KOG0515752 consensus p53-interacting protein 53BP/ASPP, conta 99.25
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.88
PF1360630 Ank_3: Ankyrin repeat 98.88
PF1360630 Ank_3: Ankyrin repeat 98.79
PF0002333 Ank: Ankyrin repeat Hereditary spherocytosis; Inte 98.76
KOG0783 1267 consensus Uncharacterized conserved protein, conta 98.73
KOG0818 669 consensus GTPase-activating proteins of the GIT fa 98.73
KOG0506622 consensus Glutaminase (contains ankyrin repeat) [A 98.72
KOG07821004 consensus Predicted diacylglycerol kinase [Signal 98.67
PF0002333 Ank: Ankyrin repeat Hereditary spherocytosis; Inte 98.65
KOG0818 669 consensus GTPase-activating proteins of the GIT fa 98.56
KOG07821004 consensus Predicted diacylglycerol kinase [Signal 98.51
KOG0705749 consensus GTPase-activating protein Centaurin gamm 98.5
KOG0506622 consensus Glutaminase (contains ankyrin repeat) [A 98.41
KOG0522 560 consensus Ankyrin repeat protein [General function 98.39
KOG0522 560 consensus Ankyrin repeat protein [General function 98.23
KOG0521785 consensus Putative GTPase activating proteins (GAP 98.19
KOG3609 822 consensus Receptor-activated Ca2+-permeable cation 98.19
KOG0705749 consensus GTPase-activating protein Centaurin gamm 98.17
KOG3609 822 consensus Receptor-activated Ca2+-permeable cation 98.15
KOG0521785 consensus Putative GTPase activating proteins (GAP 97.86
KOG2384223 consensus Major histocompatibility complex protein 97.84
KOG2384223 consensus Major histocompatibility complex protein 97.83
KOG0511 516 consensus Ankyrin repeat protein [General function 97.83
KOG0511 516 consensus Ankyrin repeat protein [General function 97.64
KOG0520 975 consensus Uncharacterized conserved protein, conta 97.63
KOG0520 975 consensus Uncharacterized conserved protein, conta 97.62
smart0024830 ANK ankyrin repeats. Ankyrin repeats are about 33 97.05
KOG2505591 consensus Ankyrin repeat protein [General function 96.83
KOG2505 591 consensus Ankyrin repeat protein [General function 96.75
smart0024830 ANK ankyrin repeats. Ankyrin repeats are about 33 96.71
PF03158192 DUF249: Multigene family 530 protein; InterPro: IP 96.34
PF03158192 DUF249: Multigene family 530 protein; InterPro: IP 95.86
PF1192976 DUF3447: Domain of unknown function (DUF3447); Int 94.49
PF06128284 Shigella_OspC: Shigella flexneri OspC protein; Int 93.74
PF06128284 Shigella_OspC: Shigella flexneri OspC protein; Int 93.23
PF1192976 DUF3447: Domain of unknown function (DUF3447); Int 90.41
cd07920322 Pumilio Pumilio-family RNA binding domain. Puf rep 88.75
>PHA02876 ankyrin repeat protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.6e-52  Score=407.57  Aligned_cols=367  Identities=19%  Similarity=0.172  Sum_probs=300.1

Q ss_pred             hHHHHHHHHHHHhcCchHHHHHHHhhcccc---cCCCCCceEEEEeeecCCCCCC--------CC---------------
Q 044093           27 NFELMDSLYKAAVEGHTDQFRAHAQMLDQI---LTPNENTILHVHITARPDQTMR--------PN---------------   80 (427)
Q Consensus        27 ~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~---~~~~~~~~L~~~~A~~~~~~~~--------~~---------------   80 (427)
                      +..+.||||.|+..|+.|+|+.|+++.++.   .|..|.||||+  |+..++...        .+               
T Consensus        38 ~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~--a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  115 (682)
T PHA02876         38 ESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHT--ICIIPNVMDIVISLTLDCDIILDIKYASIILNKH  115 (682)
T ss_pred             ccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhcccccc--ccCCCCccccccccccchhhcccccHHHHHHHHH
Confidence            446899999999999999999999999875   77889999999  997766110        00               


Q ss_pred             chhhhHHHHHHHHH---h------------------hhCCChHHHHHHHHhhCccchhccCCCCCcHHHHHHHcCCHHHH
Q 044093           81 NELKSSLWMMMSTL---K------------------KQSSSSEHFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIV  139 (427)
Q Consensus        81 ~~~~~~~~L~~~g~---~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v  139 (427)
                      ...+.+...+....   +                  ....+..++++.+++.. ..++..|..|.||||+|+..|+.++|
T Consensus       116 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~G-advn~~d~~G~TpLh~Aa~~G~~~iv  194 (682)
T PHA02876        116 KLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGG-ADVNAKDIYCITPIHYAAERGNAKMV  194 (682)
T ss_pred             HHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence            00000111111100   0                  01233455555565554 45788899999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCcchhHHHHHHhcCCCCCCCcHHHHHHHcCCHHHHHHHHHc-------------------------
Q 044093          140 KDLIAECKKPHQNDPEKGVEAARLMLGTTNEAKDTALHEAVRYNQVDVVKMLTKE-------------------------  194 (427)
Q Consensus       140 ~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~-------------------------  194 (427)
                      ++|+++|++++.                .+..|.||||+|+..++.+++++|++.                         
T Consensus       195 ~~LL~~Gad~n~----------------~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~  258 (682)
T PHA02876        195 NLLLSYGADVNI----------------IALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLL  258 (682)
T ss_pred             HHHHHCCCCcCc----------------cCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHH
Confidence            999999999887                555666777777777766666665554                         


Q ss_pred             ----CCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCcHHHHHHhcC-CHHHHHHHHhcCCCCCCC
Q 044093          195 ----DPSLPYDANNAGETPLYLAAERGYI-NVVEDIISTCKSPADHGPMGRTASHAAAFCE-DTEMTKVLLSSKGTLTSK  268 (427)
Q Consensus       195 ----~~~~~~~~~~~~~t~L~~a~~~~~~-~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~Ll~~~~~~~~~  268 (427)
                          |.+++ ..+..|.||||+|+..++. +++++|++.|++++..+..|.||||+|+..+ ..+.++.|+..+.. ++.
T Consensus       259 Ll~~g~~vn-~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gad-in~  336 (682)
T PHA02876        259 LYDAGFSVN-SIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGAD-VNA  336 (682)
T ss_pred             HHHCCCCCC-CCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCC-CCC
Confidence                44443 4566799999999999986 6899999999999999999999999999998 58999999998876 677


Q ss_pred             CCCCCChHHHHHHHcC-CHHHHHHHHhcCchhhhhccCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccCCCCCcHHHH
Q 044093          269 PDQHGWLPLHLAAYLG-KHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDDRGWNVFHF  347 (427)
Q Consensus       269 ~~~~~~t~l~~a~~~~-~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~l~~  347 (427)
                      .+..|.||||.|+..+ +.++++.|++.|+++ +.++..|.||||+|+..++.+++++|++.+++ ++..+..|.||||+
T Consensus       337 ~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadi-n~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad-~~~~~~~g~T~Lh~  414 (682)
T PHA02876        337 ADRLYITPLHQASTLDRNKDIVITLLELGANV-NARDYCDKTPIHYAAVRNNVVIINTLLDYGAD-IEALSQKIGTALHF  414 (682)
T ss_pred             cccCCCcHHHHHHHhCCcHHHHHHHHHcCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-ccccCCCCCchHHH
Confidence            8999999999999864 688999999999998 78899999999999999999999999999766 57788999999999


Q ss_pred             HHHcCC-HHHHHHHhcCCCCCCccccccCCCCchhHHHHhcC-chhH-hhhcccccchhcccccCCChhhHHhhc
Q 044093          348 ALHSGS-RRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSG-SFIQ-SFVCHPKVDRLAFNHHNCSAEDIICSD  419 (427)
Q Consensus       348 A~~~~~-~~~~~~Ll~~~~~g~~~n~~d~~g~tpL~~a~~~~-~~~~-~~L~~~gad~~~~~~~g~t~l~~a~~~  419 (427)
                      |+..++ ..++++|+++   |+++|.+|..|+||||+|+..+ ...+ ++|+++|+|++.+|..|.||+++|+..
T Consensus       415 A~~~~~~~~~vk~Ll~~---gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~  486 (682)
T PHA02876        415 ALCGTNPYMSVKTLIDR---GANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEY  486 (682)
T ss_pred             HHHcCCHHHHHHHHHhC---CCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh
Confidence            997665 5679999998   9999999999999999999976 5677 999999999999999999999999864

>PHA02946 ankyin-like protein; Provisional Back     alignment and domain information
>PHA02876 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02946 ankyin-like protein; Provisional Back     alignment and domain information
>KOG0510 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA02730 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02716 CPXV016; CPX019; EVM010; Provisional Back     alignment and domain information
>PHA02874 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02874 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02917 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0510 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA03095 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PHA03100 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA03095 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02716 CPXV016; CPX019; EVM010; Provisional Back     alignment and domain information
>PHA02730 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02878 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA03100 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02878 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02917 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PHA02989 ankyrin repeat protein; Provisional Back     alignment and domain information
>KOG0508 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA02989 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02875 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02791 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02791 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02798 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02875 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02792 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02798 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02792 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG0508 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>PHA02859 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02795 ankyrin-like protein; Provisional Back     alignment and domain information
>PHA02859 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02795 ankyrin-like protein; Provisional Back     alignment and domain information
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] Back     alignment and domain information
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] Back     alignment and domain information
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] Back     alignment and domain information
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] Back     alignment and domain information
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] Back     alignment and domain information
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>TIGR00870 trp transient-receptor-potential calcium channel protein Back     alignment and domain information
>PLN03192 Voltage-dependent potassium channel; Provisional Back     alignment and domain information
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] Back     alignment and domain information
>KOG0514 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PHA02743 Viral ankyrin protein; Provisional Back     alignment and domain information
>PHA02743 Viral ankyrin protein; Provisional Back     alignment and domain information
>PHA02884 ankyrin repeat protein; Provisional Back     alignment and domain information
>KOG0514 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] Back     alignment and domain information
>PHA02741 hypothetical protein; Provisional Back     alignment and domain information
>PHA02741 hypothetical protein; Provisional Back     alignment and domain information
>PHA02736 Viral ankyrin protein; Provisional Back     alignment and domain information
>PHA02884 ankyrin repeat protein; Provisional Back     alignment and domain information
>PHA02736 Viral ankyrin protein; Provisional Back     alignment and domain information
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] Back     alignment and domain information
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins Back     alignment and domain information
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>KOG4214 consensus Myotrophin and similar proteins [Transcription] Back     alignment and domain information
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A Back     alignment and domain information
>KOG4214 consensus Myotrophin and similar proteins [Transcription] Back     alignment and domain information
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A Back     alignment and domain information
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only] Back     alignment and domain information
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A Back     alignment and domain information
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A Back     alignment and domain information
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>PF13606 Ank_3: Ankyrin repeat Back     alignment and domain information
>PF13606 Ank_3: Ankyrin repeat Back     alignment and domain information
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature Back     alignment and domain information
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] Back     alignment and domain information
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] Back     alignment and domain information
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature Back     alignment and domain information
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] Back     alignment and domain information
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0522 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0522 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] Back     alignment and domain information
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] Back     alignment and domain information
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] Back     alignment and domain information
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] Back     alignment and domain information
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0511 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>smart00248 ANK ankyrin repeats Back     alignment and domain information
>KOG2505 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>KOG2505 consensus Ankyrin repeat protein [General function prediction only] Back     alignment and domain information
>smart00248 ANK ankyrin repeats Back     alignment and domain information
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses Back     alignment and domain information
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses Back     alignment and domain information
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC Back     alignment and domain information
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC Back     alignment and domain information
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain Back     alignment and domain information
>cd07920 Pumilio Pumilio-family RNA binding domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query427
1n11_A437 D34 Region Of Human Ankyrin-R And Linker Length = 4 7e-16
1n0r_A126 4ank: A Designed Ankyrin Repeat Protein With Four I 1e-11
1n0r_A126 4ank: A Designed Ankyrin Repeat Protein With Four I 9e-08
2xeh_A157 Structural Determinants For Improved Thermal Stabil 1e-10
2xee_A157 Structural Determinants For Improved Thermal Stabil 1e-10
3q9u_C158 In Silico And In Vitro Co-Evolution Of A High Affin 6e-10
3nog_D169 Designed Ankyrin Repeat Protein (Darpin) Binders To 9e-10
4hb5_A169 Crystal Structure Of Engineered Protein. Northeast 1e-09
4hb5_A169 Crystal Structure Of Engineered Protein. Northeast 2e-09
4hb5_A169 Crystal Structure Of Engineered Protein. Northeast 1e-05
2qyj_A166 Crystal Structure Of A Designed Full Consensus Anky 2e-09
4f6r_D169 Tubulin:stathmin-Like Domain Complex Length = 169 2e-09
4gmr_A169 Crystal Structure Of Engineered Protein. Northeast 2e-09
4gmr_A169 Crystal Structure Of Engineered Protein. Northeast 6e-07
3noc_D169 Designed Ankyrin Repeat Protein (Darpin) Binders To 3e-09
1svx_A169 Crystal Structure Of A Designed Selected Ankyrin Re 4e-09
1svx_A169 Crystal Structure Of A Designed Selected Ankyrin Re 4e-08
3b7b_A237 Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le 6e-09
3b7b_A237 Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le 1e-07
2y1l_E169 Caspase-8 In Complex With Darpin-8.4 Length = 169 2e-08
4dui_A169 Darpin D1 Binding To Tubulin Beta Chain (not In Com 5e-08
4dui_A169 Darpin D1 Binding To Tubulin Beta Chain (not In Com 1e-07
1mj0_A166 Sank E3_5: An Artificial Ankyrin Repeat Protein Len 6e-08
1mj0_A166 Sank E3_5: An Artificial Ankyrin Repeat Protein Len 4e-07
4drx_E169 Gtp-Tubulin In Complex With A Darpin Length = 169 6e-08
4drx_E169 Gtp-Tubulin In Complex With A Darpin Length = 169 1e-07
2j8s_D169 Drug Export Pathway Of Multidrug Exporter Acrb Reve 6e-08
2j8s_D169 Drug Export Pathway Of Multidrug Exporter Acrb Reve 1e-07
2j8s_D169 Drug Export Pathway Of Multidrug Exporter Acrb Reve 3e-05
2bkk_B169 Crystal Structure Of Aminoglycoside Phosphotransfer 1e-07
2p2c_P169 Inhibition Of Caspase-2 By A Designed Ankyrin Repea 1e-07
2p2c_P169 Inhibition Of Caspase-2 By A Designed Ankyrin Repea 5e-07
4hqd_A169 Crystal Structure Of Engineered Protein. Northeast 2e-07
4hqd_A169 Crystal Structure Of Engineered Protein. Northeast 4e-04
1n0q_A93 3ank: A Designed Ankyrin Repeat Protein With Three 2e-07
1n0q_A93 3ank: A Designed Ankyrin Repeat Protein With Three 5e-07
1n0q_A93 3ank: A Designed Ankyrin Repeat Protein With Three 3e-05
4gpm_A169 Crystal Structure Of Engineered Protein. Northeast 2e-07
4gpm_A169 Crystal Structure Of Engineered Protein. Northeast 9e-06
3zu7_B169 Crystal Structure Of A Designed Selected Ankyrin Re 4e-07
1uoh_A226 Human Gankyrin Length = 226 4e-07
1qym_A227 X-Ray Structure Of Human Gankyrin Length = 227 5e-07
2dvw_A231 Structure Of The Oncoprotein Gankyrin In Complex Wi 6e-07
2v5q_C167 Crystal Structure Of Wild-type Plk-1 Kinase Domain 7e-07
2v5q_C167 Crystal Structure Of Wild-type Plk-1 Kinase Domain 4e-04
2bkg_A166 Crystal Structure Of E3_19 An Designed Ankyrin Repe 8e-07
4atz_D154 Ad5 Knob In Complex With A Designed Ankyrin Repeat 1e-06
4atz_D154 Ad5 Knob In Complex With A Designed Ankyrin Repeat 3e-05
4g8k_A337 Intact Sensor Domain Of Human Rnase L In The Inacti 1e-06
3aji_A231 Structure Of Gankyrin-S6atpase Photo-Cross-Linked S 1e-06
2v4h_C136 Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13 2e-06
1wdy_A285 Crystal Structure Of Ribonuclease Length = 285 2e-06
3zuv_B136 Crystal Structure Of A Designed Selected Ankyrin Re 2e-06
4grg_A135 Crystal Structure Of Ige Complexed With E2_79, An A 3e-06
1nfi_E213 I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213 8e-06
1ikn_D236 IkappabalphaNF-Kappab Complex Length = 236 9e-06
1s70_B299 Complex Between Protein Ser/thr Phosphatase-1 (delt 2e-05
2xzt_G136 Caspase-3 In Complex With Darpin-3.4_i78s Length = 3e-05
3hg0_D136 Crystal Structure Of A Darpin In Complex With Orf49 3e-05
2dzn_A228 Crystal Structure Analysis Of Yeast Nas6p Complexed 3e-05
2dzn_A228 Crystal Structure Analysis Of Yeast Nas6p Complexed 1e-04
1ixv_A231 Crystal Structure Analysis Of Homolog Of Oncoprotei 3e-05
1ixv_A231 Crystal Structure Analysis Of Homolog Of Oncoprotei 4e-05
1wg0_A243 Structural Comparison Of Nas6p Protein Structures I 4e-05
2xzd_G136 Caspase-3 In Complex With An Inhibitory Darpin-3.4 6e-05
2y0b_G136 Caspase-3 In Complex With An Inhibitory Darpin-3.4_ 9e-05
2y0b_G136 Caspase-3 In Complex With An Inhibitory Darpin-3.4_ 1e-04
1ot8_A239 Structure Of The Ankyrin Domain Of The Drosophila N 1e-04
3f6q_A179 Crystal Structure Of Integrin-Linked Kinase Ankyrin 1e-04
2kbx_A171 Solution Structure Of Ilk-Pinch Complex Length = 17 1e-04
3twu_A167 Crystal Structure Of Arc4 From Human Tankyrase 2 In 2e-04
2jab_A136 A Designed Ankyrin Repeat Protein Evolved To Picomo 2e-04
3eu9_A240 The Ankyrin Repeat Domain Of Huntingtin Interacting 3e-04
2qc9_A210 Mouse Notch 1 Ankyrin Repeat Intracellular Domain L 4e-04
1yyh_A253 Crystal Structure Of The Human Notch 1 Ankyrin Doma 5e-04
3c5r_A137 Crystal Structure Of The Bard1 Ankyrin Repeat Domai 5e-04
2f8x_K256 Crystal Structure Of Activated Notch, Csl And Maml 5e-04
2f8y_A223 Crystal Structure Of Human Notch1 Ankyrin Repeats T 6e-04
4b93_B269 Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri 8e-04
2vge_A229 Crystal Structure Of The C-Terminal Region Of Human 9e-04
>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437 Back     alignment and structure 
Iteration: 1

 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 128/282 (45%), Gaps = 28/282 (9%)
Query: 119 ANTKGETLLHIAARHGHADIVKDLI---AECKKPHQNDPEKGVEAARLMLGTTNEAK--- 172
           +N K ET LH+AAR GH ++ K L+   A+     ++D      AAR+  G TN  K   
Sbjct: 43  SNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI--GHTNMVKLLL 100
Query: 173 -------------DTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYI 219
                         T LH A R   V+ V  L +++ S        G TPL++AA+ G +
Sbjct: 101 ENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC-MTKKGFTPLHVAAKYGKV 159
Query: 220 NVVEDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHL 279
            V E ++     P   G  G T  H A    + ++ K+LL   G+  S P  +G+ PLH+
Sbjct: 160 RVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS-PAWNGYTPLHI 218
Query: 280 AAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCPSSCELVDD 339
           AA   +  V + LL+   SA  ++  +G  PLHLAA  G    M  L+ S  ++  L + 
Sbjct: 219 AAKQNQVEVARSLLQYGGSANAES-VQGVTPLHLAAQEGHAE-MVALLLSKQANGNLGNK 276
Query: 340 RGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPL 381
            G    H     G     ++L+K    G +V+     G TPL
Sbjct: 277 SGLTPLHLVAQEGHVPVADVLIKH---GVMVDATTRMGYTPL 315
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126 Back     alignment and structure
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126 Back     alignment and structure
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157 Back     alignment and structure
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157 Back     alignment and structure
>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158 Back     alignment and structure
>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169 Back     alignment and structure
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169 Back     alignment and structure
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169 Back     alignment and structure
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169 Back     alignment and structure
>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166 Back     alignment and structure
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169 Back     alignment and structure
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169 Back     alignment and structure
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169 Back     alignment and structure
>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169 Back     alignment and structure
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169 Back     alignment and structure
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169 Back     alignment and structure
>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237 Back     alignment and structure
>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237 Back     alignment and structure
>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169 Back     alignment and structure
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169 Back     alignment and structure
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169 Back     alignment and structure
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166 Back     alignment and structure
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166 Back     alignment and structure
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169 Back     alignment and structure
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169 Back     alignment and structure
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169 Back     alignment and structure
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169 Back     alignment and structure
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169 Back     alignment and structure
>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169 Back     alignment and structure
>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169 Back     alignment and structure
>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169 Back     alignment and structure
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169 Back     alignment and structure
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169 Back     alignment and structure
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93 Back     alignment and structure
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93 Back     alignment and structure
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93 Back     alignment and structure
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169 Back     alignment and structure
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169 Back     alignment and structure
>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169 Back     alignment and structure
>pdb|1UOH|A Chain A, Human Gankyrin Length = 226 Back     alignment and structure
>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227 Back     alignment and structure
>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231 Back     alignment and structure
>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167 Back     alignment and structure
>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167 Back     alignment and structure
>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166 Back     alignment and structure
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154 Back     alignment and structure
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154 Back     alignment and structure
>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337 Back     alignment and structure
>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231 Back     alignment and structure
>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136 Back     alignment and structure
>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285 Back     alignment and structure
>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136 Back     alignment and structure
>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135 Back     alignment and structure
>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213 Back     alignment and structure
>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236 Back     alignment and structure
>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299 Back     alignment and structure
>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136 Back     alignment and structure
>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136 Back     alignment and structure
>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228 Back     alignment and structure
>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228 Back     alignment and structure
>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231 Back     alignment and structure
>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231 Back     alignment and structure
>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243 Back     alignment and structure
>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136 Back     alignment and structure
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136 Back     alignment and structure
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136 Back     alignment and structure
>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239 Back     alignment and structure
>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179 Back     alignment and structure
>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171 Back     alignment and structure
>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167 Back     alignment and structure
>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136 Back     alignment and structure
>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240 Back     alignment and structure
>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210 Back     alignment and structure
>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253 Back     alignment and structure
>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137 Back     alignment and structure
>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256 Back     alignment and structure
>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223 Back     alignment and structure
>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269 Back     alignment and structure
>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp Length = 229 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query427
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 2e-42
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 8e-37
1wdy_A 285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 4e-14
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 1e-41
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 7e-38
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 3e-33
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 2e-28
3ljn_A 364 Hypothetical protein; ankyrin, structural genomics 2e-12
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 2e-07
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 6e-41
1n11_A 437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 9e-41
1n11_A 437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 6e-40
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 1e-19
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 3e-39
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 2e-31
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 3e-29
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 5e-22
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 1e-38
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 2e-34
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 4e-34
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 7e-29
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 4e-26
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 5e-13
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 5e-38
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 1e-32
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 3e-25
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 3e-15
2xai_A 261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 3e-08
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 1e-36
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 4e-35
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 2e-16
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 2e-36
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 3e-26
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 4e-36
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 2e-33
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 1e-24
3utm_A 351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 3e-20
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 4e-20
3utm_A 351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 9e-16
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 8e-36
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 1e-24
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 7e-07
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 2e-35
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 8e-34
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 6e-23
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 7e-35
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 3e-33
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 9e-29
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 3e-24
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 1e-23
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 4e-16
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 1e-33
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 6e-30
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 4e-21
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 4e-13
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 2e-33
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 2e-27
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 9e-23
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 6e-20
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 4e-32
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 7e-16
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 7e-13
3d9h_A 285 CDNA FLJ77766, highly similar to HOMO sapiens anky 9e-12
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 5e-31
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 4e-26
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 2e-08
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 1e-30
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 4e-27
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 2e-26
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 3e-22
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 4e-07
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 1e-30
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 3e-29
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 3e-27
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 2e-18
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 7e-15
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 2e-29
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 3e-20
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 3e-29
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 2e-19
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 2e-12
3ui2_A 244 Signal recognition particle 43 kDa protein, chlor; 1e-06
2rfa_A232 Transient receptor potential cation channel subfa 3e-29
2rfa_A232 Transient receptor potential cation channel subfa 1e-26
2rfa_A232 Transient receptor potential cation channel subfa 4e-19
2rfa_A232 Transient receptor potential cation channel subfa 2e-16
2rfa_A232 Transient receptor potential cation channel subfa 2e-12
3v30_A172 DNA-binding protein rfxank; structural genomics co 6e-29
3v30_A172 DNA-binding protein rfxank; structural genomics co 2e-23
3v30_A172 DNA-binding protein rfxank; structural genomics co 5e-20
3hra_A201 Ankyrin repeat family protein; structural protein; 7e-29
3hra_A201 Ankyrin repeat family protein; structural protein; 6e-24
3hra_A201 Ankyrin repeat family protein; structural protein; 5e-20
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 7e-28
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 6e-27
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 1e-26
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 1e-21
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 2e-16
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 4e-27
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 1e-26
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 7e-25
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 9e-24
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 7e-15
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 5e-11
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 1e-26
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 2e-24
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 1e-23
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 8e-23
3v31_A167 Ankyrin repeat family A protein 2; structural geno 2e-26
3v31_A167 Ankyrin repeat family A protein 2; structural geno 3e-24
3v31_A167 Ankyrin repeat family A protein 2; structural geno 2e-22
3v31_A167 Ankyrin repeat family A protein 2; structural geno 1e-16
3v31_A167 Ankyrin repeat family A protein 2; structural geno 4e-16
2etb_A256 Transient receptor potential cation channel subfam 2e-26
2etb_A256 Transient receptor potential cation channel subfam 5e-22
2etb_A256 Transient receptor potential cation channel subfam 2e-13
2pnn_A273 Transient receptor potential cation channel subfa 3e-25
2pnn_A273 Transient receptor potential cation channel subfa 1e-22
2pnn_A273 Transient receptor potential cation channel subfa 1e-14
2pnn_A273 Transient receptor potential cation channel subfa 3e-07
1awc_B153 Protein (GA binding protein beta 1); complex (tran 7e-24
1awc_B153 Protein (GA binding protein beta 1); complex (tran 7e-23
1awc_B153 Protein (GA binding protein beta 1); complex (tran 5e-21
1awc_B153 Protein (GA binding protein beta 1); complex (tran 2e-20
1awc_B153 Protein (GA binding protein beta 1); complex (tran 1e-16
1awc_B153 Protein (GA binding protein beta 1); complex (tran 1e-13
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 7e-24
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 3e-21
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 1e-20
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 7e-16
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 9e-09
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 8e-24
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 4e-19
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 5e-18
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 3e-15
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 8e-09
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 2e-23
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 3e-22
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 1e-21
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 4e-17
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 6e-23
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 9e-22
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 5e-20
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 7e-16
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 1e-05
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 1e-22
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 5e-22
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 4e-04
3deo_A183 Signal recognition particle 43 kDa protein; chloro 1e-22
3deo_A183 Signal recognition particle 43 kDa protein; chloro 4e-22
3deo_A183 Signal recognition particle 43 kDa protein; chloro 7e-21
3deo_A183 Signal recognition particle 43 kDa protein; chloro 2e-13
3deo_A183 Signal recognition particle 43 kDa protein; chloro 6e-08
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 1e-22
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 2e-15
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 3e-13
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 6e-13
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 6e-04
3jxi_A260 Vanilloid receptor-related osmotically activated p 1e-21
3jxi_A260 Vanilloid receptor-related osmotically activated p 3e-19
3jxi_A260 Vanilloid receptor-related osmotically activated p 1e-12
3jxi_A260 Vanilloid receptor-related osmotically activated p 6e-12
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 8e-21
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 3e-20
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 1e-15
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 1e-15
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 3e-11
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 7e-20
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 9e-18
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 2e-16
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 3e-14
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 5e-09
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 7e-19
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 5e-18
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 2e-16
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 2e-15
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 3e-15
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 1e-18
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 4e-18
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 2e-10
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 6e-18
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 5e-17
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 1e-15
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 1e-13
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 2e-06
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 9e-18
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 7e-16
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 3e-14
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 3e-13
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 2e-10
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 1e-09
1sw6_A327 Regulatory protein SWI6; transcription regulation, 1e-17
1sw6_A327 Regulatory protein SWI6; transcription regulation, 2e-17
1sw6_A327 Regulatory protein SWI6; transcription regulation, 3e-17
1sw6_A327 Regulatory protein SWI6; transcription regulation, 3e-14
1sw6_A327 Regulatory protein SWI6; transcription regulation, 2e-05
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 4e-17
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 4e-17
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 4e-10
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 2e-16
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 2e-16
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 3e-16
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 3e-14
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 9e-14
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 5e-13
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 4e-07
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 4e-06
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 1e-14
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 5e-14
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 3e-12
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 8e-11
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 1e-08
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 2e-13
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 5e-13
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 2e-12
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 2e-11
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 2e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 2e-09
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 1e-05
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 8e-05
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 4e-06
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 1e-05
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 3e-04
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 9e-04
3lvq_E497 ARF-GAP with SH3 domain, ANK repeat and PH domain 5e-05
3lvq_E 497 ARF-GAP with SH3 domain, ANK repeat and PH domain 6e-04
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 2e-04
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 7e-04
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
 Score =  149 bits (380), Expect = 2e-42
 Identities = 65/292 (22%), Positives = 104/292 (35%), Gaps = 64/292 (21%)

Query: 119 ANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKG--VEAARLMLGTTNEAKDTAL 176
           A  +   LL  A ++   D+V+ L+           E G  V           E   T L
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLL-----------EGGANVNFQ------EEEGGWTPL 43

Query: 177 HEAVRYNQVDVVKMLTKEDPSLPYDAN-----NAGETPLYLAAERGYINVVEDIISTCKS 231
           H AV+ ++ D+V++L      L + A+       G TP  LAA  G + +++  +S    
Sbjct: 44  HNAVQMSREDIVELL------LRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLS---- 93

Query: 232 PADHGP-------MGRTASHAAAFCEDTEMTKVLLS---------SKGTLTSKPDQHGWL 275
               G         G TA   AA     +  K L                  +  + G  
Sbjct: 94  ---KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT 150

Query: 276 PLHLAAYLGKHYVVKELLK---ADKSAAYKANNKGKIPLHLAALMGRLNTMQELIR---S 329
            L  AA  G   V+K LL    AD +A    +N G+  L  A L    + ++ +      
Sbjct: 151 ALMDAAEKGHVEVLKILLDEMGADVNA---CDNMGRNALIHALLSSDDSDVEAITHLLLD 207

Query: 330 CPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPL 381
             +   +  +RG      A+       V+ LL+       +N+ + DG T L
Sbjct: 208 HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE--HIEINDTDSDGKTAL 257
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373 Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241 Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351 Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237 Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223 Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244 Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179 Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192 Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167 Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256 Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156 Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229 Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229 Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229 Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229 Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229 Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162 Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183 Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156 Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156 Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156 Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156 Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156 Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260 Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137 Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126 Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376 Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376 Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376 Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136 Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136 Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136 Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136 Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136 Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93 Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93 Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93 Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93 Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93 Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110 Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110 Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110 Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110 Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278 Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278 Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278 Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301 Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301 Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301 Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301 Back     alignment and structure
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497 Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368 Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query427
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 100.0
1n11_A437 Ankyrin; clathrin, BAND 3, anion exchanger, struct 100.0
4g8k_A337 2-5A-dependent ribonuclease; ankyrin-repeat domain 100.0
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 100.0
4g8k_A337 2-5A-dependent ribonuclease; ankyrin-repeat domain 100.0
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 100.0
3utm_A351 Tankyrase-1; tankyrase, TNKS, ankryin repeat clust 100.0
1wdy_A285 2-5A-dependent ribonuclease; hydrolase, RNA-bindin 100.0
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 100.0
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 100.0
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 100.0
3d9h_A285 CDNA FLJ77766, highly similar to HOMO sapiens anky 100.0
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 100.0
2xai_A261 ASB-9, ankyrin repeat and SOCS box protein 9; tran 100.0
2fo1_E373 LIN-12 protein; beta-barrel, protein-DNA complex, 100.0
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 100.0
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 100.0
1oy3_D282 Transcription factor inhibitor I-kappa-B-beta; pro 100.0
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 100.0
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 100.0
3ljn_A364 Hypothetical protein; ankyrin, structural genomics 100.0
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 100.0
1yyh_A253 HN1;, notch 1, ankyrin domain; ankyrin repeats, ce 100.0
3b7b_A237 Euchromatic histone-lysine N-methyltransferase 1; 100.0
1k1a_A241 B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa 100.0
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 100.0
4b93_B269 Ankyrin repeat domain-containing protein 27; endoc 100.0
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 100.0
1s70_B299 130 kDa myosin-binding subunit of smooth muscle my 100.0
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 100.0
3aji_A231 26S proteasome non-ATPase regulatory subunit 10; g 100.0
2dzn_A228 Probable 26S proteasome regulatory subunit P28; an 100.0
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 100.0
4b93_B269 Ankyrin repeat domain-containing protein 27; endoc 100.0
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 100.0
3kea_A285 K1L; tropism, ANK repeat, viral protein; 2.30A {Va 100.0
1sw6_A327 Regulatory protein SWI6; transcription regulation, 100.0
3eu9_A240 Huntingtin-interacting protein 14; epigenetics, an 100.0
1sw6_A327 Regulatory protein SWI6; transcription regulation, 100.0
2f8y_A223 Notch homolog 1, translocation-associated (drosoph 100.0
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 100.0
2rfa_A232 Transient receptor potential cation channel subfa 100.0
2rfa_A232 Transient receptor potential cation channel subfa 100.0
1ikn_D236 Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 100.0
3hra_A201 Ankyrin repeat family protein; structural protein; 100.0
3hra_A201 Ankyrin repeat family protein; structural protein; 100.0
2pnn_A273 Transient receptor potential cation channel subfa 100.0
4gpm_A169 Engineered protein OR264; de novo protein, structu 100.0
2etb_A256 Transient receptor potential cation channel subfam 100.0
2pnn_A273 Transient receptor potential cation channel subfa 100.0
2etb_A256 Transient receptor potential cation channel subfam 100.0
4gpm_A169 Engineered protein OR264; de novo protein, structu 99.98
3jxi_A260 Vanilloid receptor-related osmotically activated p 99.97
3jxi_A260 Vanilloid receptor-related osmotically activated p 99.97
3v30_A172 DNA-binding protein rfxank; structural genomics co 99.97
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 99.97
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 99.97
2rfm_A192 Putative ankyrin repeat protein TV1425; ANK repeat 99.97
4hbd_A276 KN motif and ankyrin repeat domain-containing Pro; 99.97
4hbd_A276 KN motif and ankyrin repeat domain-containing Pro; 99.96
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 99.96
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 99.96
3v31_A167 Ankyrin repeat family A protein 2; structural geno 99.96
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 99.96
2aja_A376 Ankyrin repeat family protein; NESG, Q5ZSV0, struc 99.96
3v30_A172 DNA-binding protein rfxank; structural genomics co 99.96
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 99.96
2y1l_E169 Darpin-8.4; hydrolase-inhibitor complex, DEVD darp 99.96
1ihb_A162 P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit 99.96
3v31_A167 Ankyrin repeat family A protein 2; structural geno 99.96
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 99.96
2vge_A229 RELA-associated inhibitor; iaspp, nucleus, apoptos 99.95
1awc_B153 Protein (GA binding protein beta 1); complex (tran 99.95
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 99.95
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 99.95
1ycs_B239 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres 99.95
1awc_B153 Protein (GA binding protein beta 1); complex (tran 99.94
3f6q_A179 Integrin-linked protein kinase; ILK, integrin-link 99.94
3twr_A165 Tankyrase-2; ankyrin repeat, protein-protein inter 99.94
1bd8_A156 P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr 99.94
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 99.93
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 99.93
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 99.93
1d9s_A136 Cyclin-dependent kinase 4 inhibitor B; helix-turn- 99.92
3t8k_A186 Uncharacterized protein; structural genomics, PSI- 99.92
1bi7_B156 P16INK4A, MTS1, multiple tumor suppressor; cyclin 99.91
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 99.91
1n0r_A126 4ANK, 4 ankyrin repeats; structural protein; 1.50A 99.91
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 99.91
2jab_A136 H10-2-G3; HER2, darpin, ankyrin repeat protein, me 99.9
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 99.9
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 99.89
3c5r_A137 BARD-1, BRCA1-associated ring domain protein 1; an 99.89
3deo_A183 Signal recognition particle 43 kDa protein; chloro 99.89
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 99.89
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 99.89
3deo_A183 Signal recognition particle 43 kDa protein; chloro 99.88
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 99.88
3ui2_A244 Signal recognition particle 43 kDa protein, chlor; 99.88
3aaa_C123 Myotrophin, protein V-1; actin capping protein, ba 99.87
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 99.86
3ehr_A222 Osteoclast-stimulating factor 1; beta barrel, heli 99.86
2b0o_E301 UPLC1; arfgap, structural genomics, structural gen 99.86
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 99.84
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 99.84
3lvq_E 497 ARF-GAP with SH3 domain, ANK repeat and PH domain 99.83
1n0q_A93 3ANK, 3 ankyrin repeats; structural protein; 1.26A 99.83
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 99.83
3jue_A368 Arfgap with coiled-coil, ANK repeat and PH domain 99.81
1dcq_A278 PYK2-associated protein beta; zinc-binding module, 99.81
3lvq_E497 ARF-GAP with SH3 domain, ANK repeat and PH domain 99.8
2l6b_A115 NR1C; ankyrin, consensus, repeat protein, ising mo 99.79
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 99.71
2zgd_A110 3 repeat synthetic ankyrin; ankyrin repeat, hydrox 99.69
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
Probab=100.00  E-value=1.5e-60  Score=447.98  Aligned_cols=366  Identities=26%  Similarity=0.289  Sum_probs=308.9

Q ss_pred             hhhhhhHHHHHHHHHHHhcCchHHHHHHHhhcccc--cCCCCCceEEEEeeecCCCCCCCCchhhhHHHHHHHHHhhhC-
Q 044093           22 SVREKNFELMDSLYKAAVEGHTDQFRAHAQMLDQI--LTPNENTILHVHITARPDQTMRPNNELKSSLWMMMSTLKKQS-   98 (427)
Q Consensus        22 ~~~~~~~~~~~~l~~A~~~g~~~~~~~ll~~~~~~--~~~~~~~~L~~~~A~~~~~~~~~~~~~~~~~~L~~~g~~~~~-   98 (427)
                      +++..+..|.||||.||..|+++++++|++.|+++  .+..|.||||+  |+..|+       .+++++|++.|++.+. 
T Consensus         6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~--A~~~g~-------~~~v~~Ll~~g~~~~~~   76 (437)
T 1n11_A            6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHM--AARAGH-------TEVAKYLLQNKAKVNAK   76 (437)
T ss_dssp             ---------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHH--HHHHTC-------HHHHHHHHHHTCCSSCC
T ss_pred             CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH--HHHcCC-------HHHHHHHHhCCCCCCCC
Confidence            45667888999999999999999999999999776  78889999999  999999       9999999988876332 


Q ss_pred             -------------CChHHHHHHHHhhCccchhccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCCCCcchhHHHHHHh
Q 044093           99 -------------SSSEHFVRGILEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGVEAARLML  165 (427)
Q Consensus        99 -------------~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~  165 (427)
                                   .+..++++.+++.. ..++..+..|.||||+|+..|+.+++++|++.+++.+.              
T Consensus        77 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--------------  141 (437)
T 1n11_A           77 AKDDQTPLHCAARIGHTNMVKLLLENN-ANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC--------------  141 (437)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC--------------
T ss_pred             CCCCCCHHHHHHHCCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcC--------------
Confidence                         12233444444442 22344455555555555555555555555555554443              


Q ss_pred             cCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 044093          166 GTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHA  245 (427)
Q Consensus       166 ~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~  245 (427)
                        .+..|.||||+|+..|+.+++++|++.+.++. ..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+
T Consensus       142 --~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~  218 (437)
T 1n11_A          142 --MTKKGFTPLHVAAKYGKVRVAELLLERDAHPN-AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHI  218 (437)
T ss_dssp             --CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHH
T ss_pred             --CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHH
Confidence              67789999999999999999999999998875 567789999999999999999999999999999999999999999


Q ss_pred             HHhcCCHHHHHHHHhcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhcCchhhhhccCCCCcHHHHHHHcCCHHHHHH
Q 044093          246 AAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQE  325 (427)
Q Consensus       246 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~  325 (427)
                      |+..++.+++++|++.+.. .+..+..|.||||.|+..|+.+++++|++.+.+. +..+..|.||||+|+..++.+++++
T Consensus       219 A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~  296 (437)
T 1n11_A          219 AAKQNQVEVARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADV  296 (437)
T ss_dssp             HHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred             HHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHH
Confidence            9999999999999998876 6777889999999999999999999999999887 7788899999999999999999999


Q ss_pred             HHHhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCCccccccCCCCchhHHHHhcCchhH-hhhcccccchhc
Q 044093          326 LIRSCPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQ-SFVCHPKVDRLA  404 (427)
Q Consensus       326 Ll~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~g~~~n~~d~~g~tpL~~a~~~~~~~~-~~L~~~gad~~~  404 (427)
                      |++.+.. ++.++..|+||||+|+..++.+++++|+++   |+++|.+|..|.||||+|+..|+..+ ++|+++|++++.
T Consensus       297 Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~  372 (437)
T 1n11_A          297 LIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQH---QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE  372 (437)
T ss_dssp             HHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred             HHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhc---CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence            9999765 577899999999999999999999999999   99999999999999999999999999 999999999999


Q ss_pred             ccccCCChhhHHhhcc
Q 044093          405 FNHHNCSAEDIICSDK  420 (427)
Q Consensus       405 ~~~~g~t~l~~a~~~~  420 (427)
                      +|..|.||+++|+..+
T Consensus       373 ~~~~g~t~l~~A~~~g  388 (437)
T 1n11_A          373 VSSDGTTPLAIAKRLG  388 (437)
T ss_dssp             CCSSSCCHHHHHHHTT
T ss_pred             CCCCCCCHHHHHHHcC
Confidence            9999999999998765
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Back     alignment and structure
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Back     alignment and structure
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Back     alignment and structure
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Back     alignment and structure
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Back     alignment and structure
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Back     alignment and structure
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Back     alignment and structure
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Back     alignment and structure
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Back     alignment and structure
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Back     alignment and structure
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Back     alignment and structure
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Back     alignment and structure
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Back     alignment and structure
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Back     alignment and structure
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Back     alignment and structure
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Back     alignment and structure
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Back     alignment and structure
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Back     alignment and structure
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Back     alignment and structure
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Back     alignment and structure
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Back     alignment and structure
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Back     alignment and structure
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Back     alignment and structure
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Back     alignment and structure
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Back     alignment and structure
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* Back     alignment and structure
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} Back     alignment and structure
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Back     alignment and structure
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Back     alignment and structure
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Back     alignment and structure
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Back     alignment and structure
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Back     alignment and structure
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Back     alignment and structure
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Back     alignment and structure
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Back     alignment and structure
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Back     alignment and structure
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Back     alignment and structure
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Back     alignment and structure
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Back     alignment and structure
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Back     alignment and structure
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Back     alignment and structure
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Back     alignment and structure
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Back     alignment and structure
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Back     alignment and structure
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Back     alignment and structure
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Back     alignment and structure
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Back     alignment and structure
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Back     alignment and structure
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Back     alignment and structure
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Back     alignment and structure
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A Back     alignment and structure
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A Back     alignment and structure
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Back     alignment and structure
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Back     alignment and structure
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 427
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 6e-24
d1n11a_ 408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 7e-24
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 2e-22
d1n11a_408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 5e-22
d1n11a_ 408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 7e-18
d1n11a_ 408 d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta 4e-09
d1wdya_285 d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas 3e-23
d1wdya_285 d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas 1e-18
d1uoha_223 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 2e-20
d1uoha_223 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 1e-12
d1uoha_223 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 3e-09
d2ajaa1346 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 5e-19
d2ajaa1346 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 7e-09
d2ajaa1346 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 5e-08
d1oy3d_255 d.211.1.1 (D:) Transcription factor inhibitor I-ka 1e-17
d1oy3d_255 d.211.1.1 (D:) Transcription factor inhibitor I-ka 3e-11
d1oy3d_255 d.211.1.1 (D:) Transcription factor inhibitor I-ka 2e-07
d1oy3d_ 255 d.211.1.1 (D:) Transcription factor inhibitor I-ka 6e-07
d1ixva_229 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 1e-15
d1ixva_229 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 9e-08
d1ixva_ 229 d.211.1.1 (A:) 26S proteasome non-ATPase regulator 0.003
d1sw6a_301 d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker 1e-14
d1sw6a_301 d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker 1e-14
d1sw6a_301 d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker 5e-11
d1k1aa_228 d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 1e-14
d1k1aa_228 d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 3e-06
d1k1aa_228 d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 1e-04
d1k1aa_228 d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 4e-04
d2fo1e1277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 4e-14
d2fo1e1277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 2e-13
d2fo1e1277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 2e-07
d2fo1e1277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 6e-07
d2fo1e1 277 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele 3e-05
d1s70b_291 d.211.1.1 (B:) Myosin phosphatase targeting subuni 3e-11
d1s70b_291 d.211.1.1 (B:) Myosin phosphatase targeting subuni 7e-07
d1s70b_291 d.211.1.1 (B:) Myosin phosphatase targeting subuni 2e-06
d1ot8a_209 d.211.1.1 (A:) Neurogenic locus notch receptor dom 5e-11
d1ot8a_209 d.211.1.1 (A:) Neurogenic locus notch receptor dom 2e-08
d1ot8a_209 d.211.1.1 (A:) Neurogenic locus notch receptor dom 2e-07
d1ot8a_209 d.211.1.1 (A:) Neurogenic locus notch receptor dom 8e-06
d1iknd_221 d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien 3e-10
d1iknd_221 d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien 2e-09
d1iknd_221 d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien 2e-04
d1iknd_ 221 d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien 0.002
d1dcqa1154 d.211.1.1 (A:369-522) Pyk2-associated protein beta 5e-10
d1bd8a_156 d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma 6e-07
d1ihba_156 d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens 2e-05
d1ihba_156 d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens 9e-05
d1ihba_156 d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens 0.003
d1ihba_156 d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens 0.003
d1bi7b_125 d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma 6e-05
d1bi7b_125 d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma 7e-05
d1bi7b_125 d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma 3e-04
d1awcb_153 d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 { 8e-05
d1awcb_153 d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 { 4e-04
d1ycsb1130 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) 0.002
d1ycsb1130 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) 0.002
d1myoa_118 d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) 0.003
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 6e-24
 Identities = 78/311 (25%), Positives = 111/311 (35%), Gaps = 55/311 (17%)

Query: 120 NTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKG-----------------VEAAR 162
               +T LH AAR GH ++VK L+     P+                        +    
Sbjct: 63  AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122

Query: 163 LMLGTTNEAKDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVV 222
                  +   T LH A +Y +V V ++L + D   P  A   G TPL++A     +++V
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIV 181

Query: 223 EDIISTCKSPADHGPMGRTASHAAAFCEDTEMTKVLLSSKGTLTSKPDQHGWLPLHLAAY 282
           + ++    SP      G T  H AA     E+ + LL   G+  +     G  PLHLAA 
Sbjct: 182 KLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS-ANAESVQGVTPLHLAAQ 240

Query: 283 LGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRS------------- 329
            G   +V  LL    +     N  G  PLHL A  G +     LI+              
Sbjct: 241 EGHAEMVALLLSKQANGNLG-NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYT 299

Query: 330 -------------------CPSSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLV 370
                                +        G++  H A   G    V LLLK+   G   
Sbjct: 300 PLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN---GASP 356

Query: 371 NEKNDDGNTPL 381
           NE + DG TPL
Sbjct: 357 NEVSSDGTTPL 367
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408 Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285 Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223 Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346 Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255 Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229 Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301 Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228 Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228 Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228 Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291 Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291 Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291 Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209 Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209 Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209 Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209 Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154 Back     information, alignment and structure
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156 Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125 Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125 Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125 Back     information, alignment and structure
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153 Back     information, alignment and structure
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153 Back     information, alignment and structure
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130 Back     information, alignment and structure
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130 Back     information, alignment and structure
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query427
d1n11a_408 Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1n11a_408 Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1oy3d_255 Transcription factor inhibitor I-kappa-B-beta, IKB 100.0
d1wdya_285 RNase L, 2-5a-dependent ribonuclease {Human (Homo 100.0
d1wdya_285 RNase L, 2-5a-dependent ribonuclease {Human (Homo 100.0
d1oy3d_255 Transcription factor inhibitor I-kappa-B-beta, IKB 100.0
d1uoha_223 26S proteasome non-ATPase regulatory subunit 10, g 100.0
d1ixva_229 26S proteasome non-ATPase regulatory subunit 10, g 100.0
d1uoha_223 26S proteasome non-ATPase regulatory subunit 10, g 100.0
d2fo1e1277 Lin-12 {Caenorhabditis elegans [TaxId: 6239]} 100.0
d1ixva_229 26S proteasome non-ATPase regulatory subunit 10, g 100.0
d1s70b_291 Myosin phosphatase targeting subunit 1, MYPT1 {Chi 100.0
d1s70b_291 Myosin phosphatase targeting subunit 1, MYPT1 {Chi 100.0
d2fo1e1277 Lin-12 {Caenorhabditis elegans [TaxId: 6239]} 100.0
d1k1aa_228 bcl-3 {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1iknd_221 I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 99.97
d1k1aa_228 bcl-3 {Human (Homo sapiens) [TaxId: 9606]} 99.97
d1ot8a_209 Neurogenic locus notch receptor domain {Fruit fly 99.97
d1ot8a_209 Neurogenic locus notch receptor domain {Fruit fly 99.97
d1iknd_221 I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 99.96
d1ihba_156 p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] 99.95
d2ajaa1346 Hypothetical protein LPG2416 {Legionella pneumophi 99.94
d1ihba_156 p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] 99.94
d2ajaa1346 Hypothetical protein LPG2416 {Legionella pneumophi 99.94
d1bd8a_156 Cell cycle inhibitor p19ink4D {Human (Homo sapiens 99.93
d1sw6a_301 Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch 99.93
d1bd8a_156 Cell cycle inhibitor p19ink4D {Human (Homo sapiens 99.92
d1awcb_153 GA bindinig protein (GABP) beta 1 {Mouse (Mus musc 99.92
d1sw6a_301 Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch 99.92
d1awcb_153 GA bindinig protein (GABP) beta 1 {Mouse (Mus musc 99.92
d1myoa_118 Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] 99.91
d1bi7b_125 Cell cycle inhibitor p16ink4A {Human (Homo sapiens 99.9
d1myoa_118 Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] 99.9
d1bi7b_125 Cell cycle inhibitor p16ink4A {Human (Homo sapiens 99.88
d1ycsb1130 53BP2 {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1ycsb1130 53BP2 {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1dcqa1154 Pyk2-associated protein beta {Mouse (Mus musculus) 99.85
d1dcqa1154 Pyk2-associated protein beta {Mouse (Mus musculus) 99.82
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-53  Score=389.88  Aligned_cols=355  Identities=25%  Similarity=0.298  Sum_probs=319.3

Q ss_pred             HHHHHHHHhcCchHHHHHHHhhcccc--cCCCCCceEEEEeeecCCCCCCCCchhhhHHHHHHHHHhhhCCChHHHHHHH
Q 044093           31 MDSLYKAAVEGHTDQFRAHAQMLDQI--LTPNENTILHVHITARPDQTMRPNNELKSSLWMMMSTLKKQSSSSEHFVRGI  108 (427)
Q Consensus        31 ~~~l~~A~~~g~~~~~~~ll~~~~~~--~~~~~~~~L~~~~A~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~  108 (427)
                      +||||.||..|++++|++|++.|+++  .|..|.||||+  |+..|+       .+++++|+++|++             
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~--A~~~g~-------~~iv~~Ll~~gad-------------   58 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHM--AARAGH-------TEVAKYLLQNKAK-------------   58 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHH--HHHHTC-------HHHHHHHHHHTCC-------------
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHH--HHHcCC-------HHHHHHHHHCcCC-------------
Confidence            48999999999999999999999877  88999999999  999999       9999999977776             


Q ss_pred             HhhCccchhccCCCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCCCCcchh-----------------HHHHHHhcCCCCC
Q 044093          109 LEMCPGLLLKANTKGETLLHIAARHGHADIVKDLIAECKKPHQNDPEKGV-----------------EAARLMLGTTNEA  171 (427)
Q Consensus       109 ~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-----------------~~~~~~~~~~~~~  171 (427)
                             ++..+..|.||||+|+..|+.+++++|+..+.++.........                 ..........+..
T Consensus        59 -------i~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (408)
T d1n11a_          59 -------VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKK  131 (408)
T ss_dssp             -------SSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT
T ss_pred             -------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccc
Confidence                   5678899999999999999999999999998876654432211                 0111123556788


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhcCC
Q 044093          172 KDTALHEAVRYNQVDVVKMLTKEDPSLPYDANNAGETPLYLAAERGYINVVEDIISTCKSPADHGPMGRTASHAAAFCED  251 (427)
Q Consensus       172 g~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~  251 (427)
                      +.++++.|+..++.+++++|++++.++. ..+..|.+||++|+..++.+++++|+.+|++++..+..|.+|++.++....
T Consensus       132 ~~~~l~~a~~~~~~~~v~~ll~~~~~~~-~~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~  210 (408)
T d1n11a_         132 GFTPLHVAAKYGKVRVAELLLERDAHPN-AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ  210 (408)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccch
Confidence            9999999999999999999999998876 567789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhcCchhhhhccCCCCcHHHHHHHcCCHHHHHHHHHhCC
Q 044093          252 TEMTKVLLSSKGTLTSKPDQHGWLPLHLAAYLGKHYVVKELLKADKSAAYKANNKGKIPLHLAALMGRLNTMQELIRSCP  331 (427)
Q Consensus       252 ~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~  331 (427)
                      .+....++..... ....+..+.||++.|+..++.+++++++..+... +..+..|.||++.|+..++.+++++|++.+.
T Consensus       211 ~~~~~~l~~~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~  288 (408)
T d1n11a_         211 VEVARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKHGV  288 (408)
T ss_dssp             HHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred             hhhhhhhhhcccc-ccccCCCCCCHHHHHHHhCcHhHhhhhhcccccc-ccccCCCCChhhhhhhcCcHHHHHHHHHCCC
Confidence            9999999887666 4556778899999999999999999999988777 6788899999999999999999999999876


Q ss_pred             CCccccCCCCCcHHHHHHHcCCHHHHHHHhcCCCCCCccccccCCCCchhHHHHhcCchhH-hhhcccccchhcccccCC
Q 044093          332 SSCELVDDRGWNVFHFALHSGSRRTVELLLKSPSLGNLVNEKNDDGNTPLLEHAVSGSFIQ-SFVCHPKVDRLAFNHHNC  410 (427)
Q Consensus       332 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~g~~~n~~d~~g~tpL~~a~~~~~~~~-~~L~~~gad~~~~~~~g~  410 (427)
                      + ++..+..+.||||+++..+..++++++++.   |+++|.+|.+|+||||+|++.|+.++ ++|+++|||++++|.+|+
T Consensus       289 ~-~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~---g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~  364 (408)
T d1n11a_         289 M-VDATTRMGYTPLHVASHYGNIKLVKFLLQH---QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT  364 (408)
T ss_dssp             C-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSC
T ss_pred             c-cccccccccccchhhcccCcceeeeeeccc---cccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence            6 577888999999999999999999999998   99999999999999999999999999 999999999999999999


Q ss_pred             ChhhHHhhccc
Q 044093          411 SAEDIICSDKL  421 (427)
Q Consensus       411 t~l~~a~~~~~  421 (427)
                      ||+|+|+..+.
T Consensus       365 t~L~~A~~~~~  375 (408)
T d1n11a_         365 TPLAIAKRLGY  375 (408)
T ss_dssp             CHHHHHHHTTC
T ss_pred             CHHHHHHHcCC
Confidence            99999988753
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Back     information, alignment and structure
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure