Citrus Sinensis ID: 044163

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780---
HHQSMSTTIKINDANFQILIDNPDLTTCILFNKTTVYSKGISLDEKVVTSVLPVVMIQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPVHLKDLAGRAAPVVLPYNTQKYKLASNATDRIMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQGPNGTLHNFNINILHYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITVFRINLEENIVENESEKHIDEVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVESVNGATHKTVKTLGNLIYNYSTSSWR
cccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccEEEHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccccccEEEEEEcccccHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHccccccEEEEEcccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHccccccEEEEEEEEccHHHHHHHHHHHcccccEEEEccccccccHHHcccccccccccccccHHHHHccccccccccEEEEcEEccccccccccccccccccccccccccc
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHcccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEEEEEEHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccccccEEEEEEEccccccHHHHHHHHHccccccccEEEEEEEEEEcccccccEEEEccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHccEEEEEEEcccccccccccHHHHHHHHHHHHccccEEEEEEEccccccccccccccccEEEEEEEEccccHHHHHHHHHHHHcccccEEEEEEEEccccccccHHHHHHcHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEcccccccHHHHccHcHHHccccccccHHccccccccccEEEEEEEEEccccccccccccccccccccccccccc
hhqsmsttikindanfqilidnpdlttcilfnkttvyskgisldekvvtSVLPVVMIQsgiimgrsvfgknkiYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLrdhvprinlkRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIRrtperkpvkdVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFglvipagpplgsaLVEKSELIITHFFLPFfyirlgqltdihSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRttlpsselRILCCIHHEDNVNGIITLLratnptemnpicaypvhlkdlagraapvvlpyntqkyklaSNATDRIMRAVIKYsrssgpavavqpfimispydtMHQSICRLLkdkfiplilvplfpngevqgpngtlhnfninilhyapctvgifvdrglnscINTAKSAKFCYNVAVFFIGGPDDREAMALVSRmsghpgvsiTVFRINLeenivenesekhidevVMNEfvasnfgnaSVVCRQIVANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVESVNGATHKTVKTLGNLIYNYSTSSWR
hhqsmsttikindanFQILIDNPDLTTCILFNKTTVYSKGISLDEKVVTSVLPVVMIqsgiimgrsvfgkNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIrrtperkpvkdvYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIfykpqrrlesiarVDNCIRTLrttlpsselRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPVHLKDLAGRAAPVVLPYNTQKYKLASNATDRIMRAVIKYSrssgpavavqPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQGPNGTLHNFNINILHYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITVFRINLEENIVENESEKHIDEVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRslersndlvivGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVESVNGathktvktlgnliynystsswr
HHQSMSTTIKINDANFQILIDNPDLTTCILFNKTTVYSKGISLDEKVVTSVLPVVMIQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPVHLKDLAGRAAPVVLPYNTQKYKLASNATDRIMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQGPNGTLHNFNINILHYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITVFRINLEENIVENESEKHIDEVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVESVNGATHKTVKTLGNLIYNYSTSSWR
********IKINDANFQILIDNPDLTTCILFNKTTVYSKGISLDEKVVTSVLPVVMIQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPVHLKDLAGRAAPVVLPYNTQKYKLASNATDRIMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQGPNGTLHNFNINILHYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITVFRINLEENIVENESEKHIDEVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVESVNGATHKTVKTLGNLIYNY******
******T***INDANFQILIDNPDLTTCILFNKTTVYSKGISLDEKVVTSVLPVVMIQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIFYKPQRR**************************CCIHHEDNVNGIITLLRAT****MNPICAYPVHLKDLAGR************************RAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGE*****GTLHNFNINILHYAPCTVGIFVDRGLNSCIN**KSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITVFRINLEEN***********EVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRSLERSNDLVIVGRQQA************VEYEELGIIGDLLASADFVGGMMSILVIQ*****************************
HHQSMSTTIKINDANFQILIDNPDLTTCILFNKTTVYSKGISLDEKVVTSVLPVVMIQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPVHLKDLAGRAAPVVLPYNTQKYKLASNATDRIMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQGPNGTLHNFNINILHYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITVFRINLEENIVENESEKHIDEVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVESVNGATHKTVKTLGNLIYNYSTSSWR
***********NDANFQILIDNPDLTTCILFNKTTVYSKGISLDEKVVTSVLPVVMIQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPVHLKDLAGRAAPVVLPYNTQKYKLASNATDRIMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQGPNGTLHNFNINILHYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITVFRINLEENIVENESEKHIDEVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVES*************************
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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HHQSMSTTIKINDANFQILIDNPDLTTCILFNKTTVYSKGISLDEKVVTSVLPVVMIQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPVHLKDLAGRAAPVVLPYNTQKYKLASNATDRIMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQGPNGTLHNFNINILHYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITVFRINLEENIVENESEKHIDEVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVESVNGATHKTVKTLGNLIYNYSTSSWR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query783 2.2.26 [Sep-21-2011]
Q9SIT5821 Cation/H(+) antiporter 15 yes no 0.876 0.835 0.343 1e-117
Q1HDT2859 Cation/H(+) antiporter 24 no no 0.887 0.809 0.274 2e-81
Q8VYD4867 Cation/H(+) antiporter 23 no no 0.885 0.799 0.284 9e-80
Q9FFR9810 Cation/H(+) antiporter 18 no no 0.874 0.845 0.300 2e-79
Q9FGH6857 Cation/H(+) antiporter 25 no no 0.897 0.820 0.254 5e-79
Q9FFB8822 Cation/H(+) antiporter 3 no no 0.878 0.836 0.287 4e-78
Q9LUN4800 Cation/H(+) antiporter 19 no no 0.876 0.857 0.283 1e-77
Q9FYC1817 Cation/H(+) antiporter 4 no no 0.879 0.843 0.286 9e-77
Q9SKA9832 Cation/H(+) antiporter 21 no no 0.890 0.837 0.278 9e-73
Q9SUQ7820 Cation/H(+) antiporter 17 no no 0.881 0.841 0.260 6e-72
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function desciption
 Score =  424 bits (1090), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 251/730 (34%), Positives = 416/730 (56%), Gaps = 44/730 (6%)

Query: 57  IQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVK 116
           I  GI++G SV G++  +   ++  R ++V+ T+A +G +YF+F+V V+MD  ++ +T K
Sbjct: 70  ILGGIVLGPSVLGRSTKFAHTIFPQRSVMVLETMANVGLLYFLFLVGVEMDIMVVRKTGK 129

Query: 117 KTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELK 176
           +   +++  +++P +I    +  +      +    +  ++    S ++F V+   ++ELK
Sbjct: 130 RALTIAIGGMVLPFLIGAAFSFSMHRSEDHLGQGTYILFLGVALSVTAFPVLARILAELK 189

Query: 177 LLNSELGQLTMSTAVIHEILGWLNSILSQLM----RGGLQRILVVHVGAV-CALSIFTII 231
           L+N+E+G+++MS A+++++  W+   L+  +    +     + V+   AV  A+ +F   
Sbjct: 190 LINTEIGRISMSAALVNDMFAWILLALAIALAESDKTSFASLWVMISSAVFIAVCVF--- 246

Query: 232 VLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGP 291
           V+R  I WIIR+TPE +   + +I  I+ G +  GFI + + ++ + GA +FGLVIP GP
Sbjct: 247 VVRPGIAWIIRKTPEGENFSEFHICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGP 306

Query: 292 PLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCI 351
            LG  L+EK E  ++   LP F+   G  T+I +I+   ++L L L++  A  GKV+G +
Sbjct: 307 -LGLTLIEKLEDFVSGLLLPLFFAISGLKTNIAAIQGPATWLTLFLVIFLACAGKVIGTV 365

Query: 352 LGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVT 411
           +        +R  +     LN KG++E++     + +K +D +TF+ +VL  LV+T ++T
Sbjct: 366 IVAFFHGMPVREGITLGLLLNTKGLVEMIVLNVGKDQKVLDDETFATMVLVALVMTGVIT 425

Query: 412 PLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPT 471
           P++ I YKP ++  S  R     RT++ T P SELR+L C+H   NV  II LL A++PT
Sbjct: 426 PIVTILYKPVKKSVSYKR-----RTIQQTKPDSELRVLVCVHTPRNVPTIINLLEASHPT 480

Query: 472 EMNPICAYPVHLKDLAGRAAPVVLPYNTQKY-KLASNAT----DRIMRAVIKYSRSSGPA 526
           + +PIC Y +HL +L GRA+ +++ +NT+K  + A N T    D I+ A   Y + +   
Sbjct: 481 KRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHAA-F 539

Query: 527 VAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFP----NGEVQGPNGTLHNFNINIL 582
           VAVQP   ISPY TMH+ +C L +DK +  I++P       +G ++  N      N N+L
Sbjct: 540 VAVQPLTAISPYSTMHEDVCSLAEDKRVSFIIIPFHKQQTVDGGMESTNPAYRLVNQNLL 599

Query: 583 HYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSIT 642
             +PC+VGI VDRGLN       S      VAV F GGPDDREA+A   RM+ HPG+++T
Sbjct: 600 ENSPCSVGILVDRGLNGATRL-NSNTVSLQVAVLFFGGPDDREALAYAWRMAQHPGITLT 658

Query: 643 VFRINLEENIVENES------------------EKHIDEVVMNEFVASNFGNASVVCRQI 684
           V R   +E+  +  S                  ++ +D+  +N F A N    S+V  + 
Sbjct: 659 VLRFIHDEDEADTASTRATNDSDLKIPKMDHRKQRQLDDDYINLFRAENAEYESIVYIEK 718

Query: 685 VANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFV 744
           + ++ ++ V+AVRS++ S+DL IVGR +  SS L   +  W E  ELG IGDLLAS+DF 
Sbjct: 719 LVSNGEETVAAVRSMDSSHDLFIVGRGEGMSSPLTAGLTDWSECPELGAIGDLLASSDF- 777

Query: 745 GGMMSILVIQ 754
              +S+LV+Q
Sbjct: 778 AATVSVLVVQ 787
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q1HDT2|CHX24_ARATH Cation/H(+) antiporter 24 OS=Arabidopsis thaliana GN=CHX24 PE=2 SV=2 Back     alignment and function description
>sp|Q8VYD4|CHX23_ARATH Cation/H(+) antiporter 23, chloroplastic OS=Arabidopsis thaliana GN=CHX23 PE=1 SV=1 Back     alignment and function description
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description
>sp|Q9FGH6|CHX25_ARATH Cation/H(+) antiporter 25 OS=Arabidopsis thaliana GN=CHX25 PE=2 SV=1 Back     alignment and function description
>sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 Back     alignment and function description
>sp|Q9LUN4|CHX19_ARATH Cation/H(+) antiporter 19 OS=Arabidopsis thaliana GN=CHX19 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKA9|CHX21_ARATH Cation/H(+) antiporter 21 OS=Arabidopsis thaliana GN=CHX21 PE=2 SV=2 Back     alignment and function description
>sp|Q9SUQ7|CHX17_ARATH Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query783
255576723789 K(+)/H(+) antiporter, putative [Ricinus 0.891 0.884 0.381 1e-140
255559551 1512 monovalent cation:proton antiporter, put 0.900 0.466 0.385 1e-135
255559563746 monovalent cation:proton antiporter, put 0.855 0.898 0.373 1e-127
449459268837 PREDICTED: cation/H(+) antiporter 15-lik 0.891 0.833 0.359 1e-125
357432837871 monovalent cation H+ exchanger 23 [Glyci 0.909 0.817 0.353 1e-120
356569280 1584 PREDICTED: uncharacterized protein LOC10 0.885 0.437 0.355 1e-120
296088536820 unnamed protein product [Vitis vinifera] 0.877 0.837 0.348 1e-119
357461423821 K(+)/H(+) antiporter [Medicago truncatul 0.951 0.907 0.317 1e-119
224096008769 cation proton exchanger [Populus trichoc 0.871 0.886 0.346 1e-118
359477011837 PREDICTED: cation/H(+) antiporter 15-lik 0.877 0.820 0.340 1e-117
>gi|255576723|ref|XP_002529249.1| K(+)/H(+) antiporter, putative [Ricinus communis] gi|223531285|gb|EEF33127.1| K(+)/H(+) antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/719 (38%), Positives = 438/719 (60%), Gaps = 21/719 (2%)

Query: 54  VVMIQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILR 113
           V  I +GII+G SV G+NK + +  +  +EML+ NT+A +G  Y +FI+ VKMD   +L 
Sbjct: 77  VCNILAGIILGPSVLGRNKAFMETFFPPKEMLIFNTVARLGTAYLIFIIAVKMDVKTLLS 136

Query: 114 TVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLA---SRSSFAVVVD 170
           + KK W + +   + P +I+ + +  +   +    LK     ++FL    S + F VV  
Sbjct: 137 SAKKIWPIGLCSYIFPFVITLIFSSAMYKELSAC-LKGMNM-VTFLCGAISVTYFPVVAQ 194

Query: 171 AISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTI 230
            I EL LL +ELGQL +S++++ ++     +I+   +        + +  A+CA  I  +
Sbjct: 195 FIEELDLLTTELGQLALSSSMLIQMTSHAITIIGVAVTRDSYIHSIYYFLAICATIILAV 254

Query: 231 IVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAG 290
            V+R  I   I+ TPE KP+K+VY+IAI+IG + +  I + +  +++ GA + GL+IP G
Sbjct: 255 YVIRPAILLSIKITPEGKPIKEVYVIAILIGTLIMAVITDVMWYDFLSGALLTGLIIPDG 314

Query: 291 PPLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGC 350
           PPLG+ LVEKSEL++   FLP F++++G LTD+ S+++ ++   + L++    L K++G 
Sbjct: 315 PPLGAILVEKSELMVMEIFLPLFFVQVGYLTDVSSLQNIKAVTVVLLLVTVCCLTKIIGT 374

Query: 351 ILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIV 410
           +L  +      + AL     LN KG+++L  F R++SR  ++ + ++ LVL NL++ AI 
Sbjct: 375 LLASLYLNIKFQTALFLGLILNFKGVVDLTTFHRFQSRNILEKRCYTALVLFNLLVVAIF 434

Query: 411 TPLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNP 470
            PLI  FYKP+ RL          R L++T  + ELR L CI+HE+NV G+I LL A+N 
Sbjct: 435 YPLIEFFYKPRIRLAGRYSKTKYSRALQSTPQAEELRALTCIYHENNVPGMIALLDASNH 494

Query: 471 TEMNPICAYPVHLKDLAGRAAPVVLPYNTQKYKLASN----ATDRIMRAVIKYSRSSGPA 526
             ++P+CAY VH+ DL GR AP +LPY   K +++++    ++ RIM A I YS+++   
Sbjct: 495 RAISPLCAYVVHVVDLVGRTAPSLLPYK-GKTRMSNHDPCSSSSRIMSAFINYSKTASGR 553

Query: 527 VAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQ---GPNGTLHNFNINILH 583
           V++QPF M++P+ TMH  IC L ++  IP I+VP   N  +       G L +FN  +  
Sbjct: 554 VSLQPFTMVAPFRTMHNIICNLAEENLIPFIIVPFHENQILDLNSKQKGVLQDFNSQLQA 613

Query: 584 YAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITV 643
           +APCTVGI  DRGL   +N  +       + V FIGG DDREA+AL  RMSG+P ++IT+
Sbjct: 614 HAPCTVGILYDRGLQPRLNKCR-------IVVVFIGGADDREALALAIRMSGNPDMNITM 666

Query: 644 FRINLEENIVENESEKHIDEVVMNEFVASNFGNASVVCRQIVANDTKQLVSAVRSLERSN 703
            RIN  ++   + +E  +DE+++ EF+ +N  N  ++C+Q+  ND+ Q+++AV+SL R+ 
Sbjct: 667 LRINSAKDKDRSITEAQLDELLVKEFIDNNLNNPRILCQQVSVNDSLQMLNAVQSLRRNY 726

Query: 704 DLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVESVNGA 762
           DLV+VG+    +   E+++  WVEY ELG+IGD+LAS DF   M S+LV++    VN +
Sbjct: 727 DLVMVGKNSG-ARAFEKDLTEWVEYAELGVIGDMLASTDFYNEMTSVLVMEHCAVVNKS 784

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255559551|ref|XP_002520795.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223539926|gb|EEF41504.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255559563|ref|XP_002520801.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223539932|gb|EEF41510.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449459268|ref|XP_004147368.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] gi|449513321|ref|XP_004164295.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357432837|gb|AET79251.1| monovalent cation H+ exchanger 23 [Glycine max] Back     alignment and taxonomy information
>gi|356569280|ref|XP_003552831.1| PREDICTED: uncharacterized protein LOC100781310 [Glycine max] Back     alignment and taxonomy information
>gi|296088536|emb|CBI37527.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357461423|ref|XP_003600993.1| K(+)/H(+) antiporter [Medicago truncatula] gi|355490041|gb|AES71244.1| K(+)/H(+) antiporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|224096008|ref|XP_002310518.1| cation proton exchanger [Populus trichocarpa] gi|222853421|gb|EEE90968.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477011|ref|XP_002262677.2| PREDICTED: cation/H(+) antiporter 15-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query783
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.756 0.721 0.343 8.9e-113
TAIR|locus:2090462800 CHX19 "cation/H+ exchanger 19" 0.878 0.86 0.285 8e-85
TAIR|locus:2172631822 CHX3 "cation/H+ exchanger 3" [ 0.758 0.722 0.307 8.3e-83
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.763 0.731 0.306 2.8e-82
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.810 0.783 0.291 9.7e-80
TAIR|locus:2166168859 CHX24 "cation/H+ exchanger 24" 0.634 0.578 0.277 1.1e-79
TAIR|locus:2128484820 CHX17 "cation/H+ exchanger 17" 0.761 0.726 0.276 5.6e-78
TAIR|locus:2031968867 CHX23 "cation/H+ exchanger 23" 0.885 0.799 0.285 6.2e-78
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.891 0.841 0.283 1.2e-77
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.871 0.820 0.284 4.1e-77
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 952 (340.2 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
 Identities = 212/617 (34%), Positives = 355/617 (57%)

Query:    57 IQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVK 116
             I  GI++G SV G++  +   ++  R ++V+ T+A +G +YF+F+V V+MD  ++ +T K
Sbjct:    70 ILGGIVLGPSVLGRSTKFAHTIFPQRSVMVLETMANVGLLYFLFLVGVEMDIMVVRKTGK 129

Query:   117 KTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELK 176
             +   +++  +++P +I    +  +      +    +  ++    S ++F V+   ++ELK
Sbjct:   130 RALTIAIGGMVLPFLIGAAFSFSMHRSEDHLGQGTYILFLGVALSVTAFPVLARILAELK 189

Query:   177 LLNSELGQLTMSTAVIHEILGW----LNSILSQLMRGGLQRILVVHVGAV-CALSIFTII 231
             L+N+E+G+++MS A+++++  W    L   L++  +     + V+   AV  A+ +F   
Sbjct:   190 LINTEIGRISMSAALVNDMFAWILLALAIALAESDKTSFASLWVMISSAVFIAVCVF--- 246

Query:   232 VLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGP 291
             V+R  I WIIR+TPE +   + +I  I+ G +  GFI + + ++ + GA +FGLVIP GP
Sbjct:   247 VVRPGIAWIIRKTPEGENFSEFHICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGP 306

Query:   292 PLGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCI 351
              LG  L+EK E  ++   LP F+   G  T+I +I+   ++L L L++  A  GKV+G +
Sbjct:   307 -LGLTLIEKLEDFVSGLLLPLFFAISGLKTNIAAIQGPATWLTLFLVIFLACAGKVIGTV 365

Query:   352 LGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVT 411
             +        +R  +     LN KG++E++     + +K +D +TF+ +VL  LV+T ++T
Sbjct:   366 IVAFFHGMPVREGITLGLLLNTKGLVEMIVLNVGKDQKVLDDETFATMVLVALVMTGVIT 425

Query:   412 PLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPT 471
             P++ I YKP ++  S  R     RT++ T P SELR+L C+H   NV  II LL A++PT
Sbjct:   426 PIVTILYKPVKKSVSYKR-----RTIQQTKPDSELRVLVCVHTPRNVPTIINLLEASHPT 480

Query:   472 EMNPICAYPVHLKDLAGRAAPVVLPYNTQKY-KLASNAT----DRIMRAVIKYSRSSGPA 526
             + +PIC Y +HL +L GRA+ +++ +NT+K  + A N T    D I+ A   Y + +   
Sbjct:   481 KRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHAA-F 539

Query:   527 VAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFP----NGEVQGPNGTLHNFNINIL 582
             VAVQP   ISPY TMH+ +C L +DK +  I++P       +G ++  N      N N+L
Sbjct:   540 VAVQPLTAISPYSTMHEDVCSLAEDKRVSFIIIPFHKQQTVDGGMESTNPAYRLVNQNLL 599

Query:   583 HYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSIT 642
               +PC+VGI VDRGLN       S      VAV F GGPDDREA+A   RM+ HPG+++T
Sbjct:   600 ENSPCSVGILVDRGLNGATRL-NSNTVSLQVAVLFFGGPDDREALAYAWRMAQHPGITLT 658

Query:   643 VFRINLEENIVENESEK 659
             V R   +E+  +  S +
Sbjct:   659 VLRFIHDEDEADTASTR 675
GO:0006812 "cation transport" evidence=IEA;IC
GO:0009507 "chloroplast" evidence=ISM
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006885 "regulation of pH" evidence=IMP
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166168 CHX24 "cation/H+ exchanger 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128484 CHX17 "cation/H+ exchanger 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031968 CHX23 "cation/H+ exchanger 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SIT5CHX15_ARATHNo assigned EC number0.34380.87610.8355yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00013639001
SubName- Full=Chromosome chr4 scaffold_519, whole genome shotgun sequence; (1178 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query783
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-147
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 2e-23
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 4e-19
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 4e-10
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  452 bits (1163), Expect = e-147
 Identities = 255/731 (34%), Positives = 415/731 (56%), Gaps = 44/731 (6%)

Query: 57  IQSGIIMGRSVFGKNKIYQDIMYRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVK 116
           I  G+I+G SV G+++++ + ++  R ++V+ T+A +G +YF+F+V V+MD ++I RT K
Sbjct: 74  ILGGVILGPSVLGQSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGK 133

Query: 117 KTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLASRSSFAVVVDAISELK 176
           K   +++  + +P  I    + +       ++   F  ++    S ++F V+   ++E+K
Sbjct: 134 KALAIAIAGMALPFCIGLAFSFIFHQVSRNVHQGTFILFLGVALSVTAFPVLARILAEIK 193

Query: 177 LLNSELGQLTMSTAVIHEILGW----LNSILSQLMRGGLQRILVVHVGAVCALSIFTIIV 232
           L+N+ELG++ MS A+++++  W    L   L++     L  + V+       L  F   V
Sbjct: 194 LINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVL--FCFYV 251

Query: 233 LRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPP 292
           +R  I WIIRRTPE +   + YI  I+ G +  GFI + + ++ + GA +FGLVIP GP 
Sbjct: 252 VRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGP- 310

Query: 293 LGSALVEKSELIITHFFLPFFYIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCIL 352
           LG  L+EK E  ++   LP F+   G  T++  I+   ++  L L+++ A  GK++G I+
Sbjct: 311 LGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTII 370

Query: 353 GLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTFSELVLSNLVLTAIVTP 412
               +    R  +     +N KG++E++     R ++ +D ++F+ +VL  + +TA++TP
Sbjct: 371 IAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITP 430

Query: 413 LIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPTE 472
           ++ + Y+P RRL    R     RT++ +   +ELR+L C+H   NV  II LL A++PT+
Sbjct: 431 VVTVVYRPARRLVGYKR-----RTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTK 485

Query: 473 MNPICAYPVHLKDLAGRAAPVVLPYNTQKYKL-ASNAT----DRIMRAVIKYSRSSGPAV 527
            +PIC Y +HL +L GRA+ +++ +NT+K    A N T    D I+ A   Y + +G  V
Sbjct: 486 RSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHAG-CV 544

Query: 528 AVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQG----PNGTLHNFNINILH 583
           +VQP   ISPY TMH+ +C L +DK + LI++P      V G     N      N N+L 
Sbjct: 545 SVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLA 604

Query: 584 YAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAMALVSRMSGHPGVSITV 643
            APC+VGI VDRGL+     A +    ++VAV F GGPDDREA+A   RMS HPG+++TV
Sbjct: 605 NAPCSVGILVDRGLSGATRLASNQV-SHHVAVLFFGGPDDREALAYAWRMSEHPGITLTV 663

Query: 644 FRINLEEN--------------------IVENESEKHIDEVVMNEFVASNFGNASVVCRQ 683
            R    E+                      + + E+ +DE  +NEF A N GN S+V  +
Sbjct: 664 MRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTE 723

Query: 684 IVANDTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADF 743
            V ++ ++ V+A+RS++ ++DL IVGR Q   S L   +  W E  ELG IGDLLAS+DF
Sbjct: 724 KVVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDF 783

Query: 744 VGGMMSILVIQ 754
               +S+LV+Q
Sbjct: 784 -AATVSVLVVQ 793

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 783
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.93
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.93
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.88
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.87
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.85
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.74
PRK11175305 universal stress protein UspE; Provisional 99.63
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.6
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.47
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.4
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.28
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.05
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 98.99
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 98.97
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 98.93
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 98.91
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.83
cd01987124 USP_OKCHK USP domain is located between the N-term 98.81
PRK15456142 universal stress protein UspG; Provisional 98.79
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.7
PRK15005144 universal stress protein F; Provisional 98.69
PRK09982142 universal stress protein UspD; Provisional 98.67
PRK15118144 universal stress global response regulator UspA; P 98.59
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.57
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.56
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.49
cd00293130 USP_Like Usp: Universal stress protein family. The 98.43
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.4
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.39
PRK15005144 universal stress protein F; Provisional 98.34
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 98.34
PRK10116142 universal stress protein UspC; Provisional 98.29
PRK09982142 universal stress protein UspD; Provisional 98.29
PRK11175305 universal stress protein UspE; Provisional 98.26
PRK15456142 universal stress protein UspG; Provisional 98.08
cd01987124 USP_OKCHK USP domain is located between the N-term 98.08
PRK15118144 universal stress global response regulator UspA; P 98.05
cd00293130 USP_Like Usp: Universal stress protein family. The 98.03
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 98.0
PRK10116142 universal stress protein UspC; Provisional 98.0
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.73
COG0589154 UspA Universal stress protein UspA and related nuc 97.41
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 97.36
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 97.2
PRK12652357 putative monovalent cation/H+ antiporter subunit E 97.06
COG0385319 Predicted Na+-dependent transporter [General funct 97.0
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 96.89
COG0589154 UspA Universal stress protein UspA and related nuc 96.79
PRK03562621 glutathione-regulated potassium-efflux system prot 96.62
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 96.45
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 96.3
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.29
PRK10669558 putative cation:proton antiport protein; Provision 96.26
PRK03659601 glutathione-regulated potassium-efflux system prot 96.24
COG0475397 KefB Kef-type K+ transport systems, membrane compo 96.18
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 96.05
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 96.05
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 95.91
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 95.87
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 95.83
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 95.8
PRK10490 895 sensor protein KdpD; Provisional 95.73
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 95.71
PRK05326562 potassium/proton antiporter; Reviewed 95.19
TIGR00698335 conserved hypothetical integral membrane protein. 94.96
COG2855334 Predicted membrane protein [Function unknown] 94.91
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 94.86
TIGR00832328 acr3 arsenical-resistance protein. The first prote 94.83
COG3493438 CitS Na+/citrate symporter [Energy production and 94.52
TIGR00698335 conserved hypothetical integral membrane protein. 94.49
PLN03159 832 cation/H(+) antiporter 15; Provisional 94.18
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 93.69
TIGR00841286 bass bile acid transporter. Functionally character 93.68
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 93.58
PF03956191 DUF340: Membrane protein of unknown function (DUF3 93.57
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 93.26
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 92.79
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 92.38
TIGR00930953 2a30 K-Cl cotransporter. 92.27
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 91.81
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 90.35
PRK10490 895 sensor protein KdpD; Provisional 90.32
COG3180352 AbrB Putative ammonia monooxygenase [General funct 90.32
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 90.2
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 89.8
PRK04288232 antiholin-like protein LrgB; Provisional 88.14
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 87.59
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 87.53
PRK03818552 putative transporter; Validated 87.3
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 85.72
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 85.32
PF03956191 DUF340: Membrane protein of unknown function (DUF3 85.25
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 83.19
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 82.84
PRK03359256 putative electron transfer flavoprotein FixA; Revi 82.31
TIGR01625154 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati 82.14
COG1883375 OadB Na+-transporting methylmalonyl-CoA/oxaloaceta 81.27
TIGR01109354 Na_pump_decarbB sodium ion-translocating decarboxy 80.99
PRK10711231 hypothetical protein; Provisional 80.96
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.2e-139  Score=1248.24  Aligned_cols=721  Identities=35%  Similarity=0.641  Sum_probs=653.1

Q ss_pred             ccccccccccccccccccccccccCchhHHHh----------------------------hheeecccccCCcccccccc
Q 044163           27 TCILFNKTTVYSKGISLDEKVVTSVLPVVMIQ----------------------------SGIIMGRSVFGKNKIYQDIM   78 (783)
Q Consensus        27 ~c~~~~~~~~~~~Gi~~g~~~~~~~lP~l~~~----------------------------aGiilGPs~lg~~~~~~~~l   78 (783)
                      .|+..++.  +|+|+|+|+||+++.+|.++.|                            +|+++||+++|+++.+.+.+
T Consensus        18 ~c~~~~~~--~s~g~~~g~~pl~~~l~~~llql~lil~~a~l~~~ll~rl~~P~ivgeIlaGIlLGPs~lg~i~~~~~~~   95 (832)
T PLN03159         18 VCYAPMMI--TTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFANTI   95 (832)
T ss_pred             ccccCCCc--cCCcccccCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHhcCHhhhCcChhhhhhc
Confidence            59954455  9999999999999999988777                            99999999999999899999


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHhhhcCChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHH
Q 044163           79 YRGREMLVVNTLATMGGIYFVFIVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISF  158 (783)
Q Consensus        79 fp~~~~~~l~~la~iGl~~llF~~Gle~d~~~l~~~~~~~~~i~~~~~lip~~~g~~~~~~l~~~~~~~~~~~~~l~lg~  158 (783)
                      ||.++.+.+++++++|++++||++|+|+|++.+||++|+++.+|++++++|+++|+++++++.............+++|+
T Consensus        96 fp~~~~~~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l~~~~~~~~~~~~~l~~g~  175 (832)
T PLN03159         96 FPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQVSRNVHQGTFILFLGV  175 (832)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhHHHHHHHH
Confidence            99888889999999999999999999999999999999999999999999999999888877432111122356789999


Q ss_pred             HHhhccHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 044163          159 LASRSSFAVVVDAISELKLLNSELGQLTMSTAVIHEILGWLNSILSQLMRG-G-LQRILVVHVGAVCALSIFTIIVLRLM  236 (783)
Q Consensus       159 ~ls~TS~~Vv~~iL~el~ll~s~~g~l~ls~aii~Di~~~ill~v~~~~~~-~-~~~~~~~~~~~~i~f~~~~~~v~r~~  236 (783)
                      ++|.||+||++++|+|+|+++++.||+++++++++|+++|++++++.++.. + +....++.++..++|++++.+++||+
T Consensus       176 alS~Ts~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~~~~~~~l~~~l~~~~f~~~~~~v~r~~  255 (832)
T PLN03159        176 ALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLASLWVLLSSVAFVLFCFYVVRPG  255 (832)
T ss_pred             HHHHhhHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998877652 2 22335566777778888889999999


Q ss_pred             HHHHHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 044163          237 IEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGPPLGSALVEKSELIITHFFLPFFYIR  316 (783)
Q Consensus       237 ~~~l~~r~~~~~~~~e~~~~~vl~~~l~~~~lae~lG~~~~lGaF~aGl~l~~~~~~~~~l~~kl~~~~~~~f~PlFFv~  316 (783)
                      +.|+.||.+++++.+|.++.++++++++++++++.+|+|+++|||++|+++|+. |+++++.+|++++++++|+|+||++
T Consensus       256 ~~~~~r~~~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~~-~~~~~l~ekle~~~~~lflPlFFv~  334 (832)
T PLN03159        256 IWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNG-PLGVTLIEKLEDFVSGLLLPLFFAI  334 (832)
T ss_pred             HHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998888888889999999999999999999999999999999999985 8899999999999999999999999


Q ss_pred             hcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhhhhHHHHHHHHhhhcccCccchhhH
Q 044163          317 LGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCFLNIKGIIELMHFLRWRSRKYVDIQTF  396 (783)
Q Consensus       317 ~G~~~dl~~l~~~~~~~~~~~ii~~~~~~K~~~~~l~~~~~~~~~~~~l~lg~~m~~rG~~~lii~~i~~~~gii~~~~f  396 (783)
                      +||++|+..+.+...|..+++++++++++|+++++++++++|+|++|++.+|++|++||+++++++++|++.|+++++.|
T Consensus       335 vGl~idl~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~Lii~~ig~~~gvi~~~~f  414 (832)
T PLN03159        335 SGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESF  414 (832)
T ss_pred             hhheeeHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHHHHHHHHHhcCccCchhh
Confidence            99999998873333465566777888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHhccccchhhhhccccccccccccCCCCCceeEEEEeecCCChHHHHHHHHhhCCCCCCCc
Q 044163          397 SELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRTTLPSSELRILCCIHHEDNVNGIITLLRATNPTEMNPI  476 (783)
Q Consensus       397 ~~lv~~~vl~t~i~~pl~~~l~~~~~~~~~~~~~~~~~r~i~~~~~~~elrILv~v~~~~~~~~ll~l~~~~~~~~~~p~  476 (783)
                      ++++++++++|.+++|++.++|||+||+..||+     |++++.++++|+|||+|+|+||++++|++|++++++++++|.
T Consensus       415 ~~lVl~avl~T~i~~Plv~~ly~p~rk~~~~~~-----r~i~~~~~~~elriL~cv~~~~~v~~li~Lle~s~~t~~sp~  489 (832)
T PLN03159        415 AVMVLVAVAMTALITPVVTVVYRPARRLVGYKR-----RTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPI  489 (832)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCHHhhhccccc-----cccccCCCCCceeEEEEeccCCcHHHHHHHHHhcCCCCCCCc
Confidence            999999998899999999999999999999999     999999999999999999999999999999999999999999


Q ss_pred             eEEEEEeeccCCCCCcccccccccc-cc----cccchhHHHHHHHHHHhhcCCCCeEEEEEEEEcCCCChHHHHHHHHHh
Q 044163          477 CAYPVHLKDLAGRAAPVVLPYNTQK-YK----LASNATDRIMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKD  551 (783)
Q Consensus       477 ~v~~lhlvel~~r~~~~~~~~~~~~-~~----~~~~~~~~i~~af~~~~~~~~~~v~v~~~t~vs~~~~m~~dI~~~A~e  551 (783)
                      ++|++||+|+++|++|.+++|+.++ ..    ....++|+++++|+.|++++ +.|+++++|+|||+++||+|||++|+|
T Consensus       490 ~vy~lhLveL~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~-~~v~v~~~t~vs~~~~mh~dIc~~A~d  568 (832)
T PLN03159        490 CIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQPLTAISPYSTMHEDVCNLAED  568 (832)
T ss_pred             eEEEEEEEeecCCCccceeeeecccccccccccccccccHHHHHHHHHHhhc-CceEEEEEEEEeCcccHHHHHHHHHHh
Confidence            9999999999999999999998754 11    12345899999999999754 689999999999999999999999999


Q ss_pred             cCCCEEEEccc----CCCcccCCCcchhHHHHHHhccCCCceEEEecCCCCccccccccCCcccEEEEeccCCccHHHHH
Q 044163          552 KFIPLILVPLF----PNGEVQGPNGTLHNFNINILHYAPCTVGIFVDRGLNSCINTAKSAKFCYNVAVFFIGGPDDREAM  627 (783)
Q Consensus       552 ~~a~lIIlp~h----~~g~~~~~~~~~~~~~~~Vl~~ApCsVgIlVdRg~~~~~~~~~~~~~~~~I~v~f~GG~ddreAL  627 (783)
                      |++++||+|||    .||++++.+..+|.+|++||++||||||||||||.. +.......+..+||+++|+|||||||||
T Consensus       569 ~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~-~~~~~~~~~~~~~v~~~F~GG~DDREAL  647 (832)
T PLN03159        569 KRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLS-GATRLASNQVSHHVAVLFFGGPDDREAL  647 (832)
T ss_pred             cCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCC-ccccccccccceeEEEEecCCcchHHHH
Confidence            99999999999    488888888999999999999999999999999976 2222223345689999999999999999


Q ss_pred             HHHHHHhcCCCeEEEEEEeeecCccc--------------------ccchhhhhHHHHHHHHHhhcCCCCCEEEEEEEec
Q 044163          628 ALVSRMSGHPGVSITVFRINLEENIV--------------------ENESEKHIDEVVMNEFVASNFGNASVVCRQIVAN  687 (783)
Q Consensus       628 ~~a~rma~~~~~~ltv~~~~~~~~~~--------------------~~~~~~~~d~~~l~~~~~~~~~~~~v~~~e~~v~  687 (783)
                      +||+|||+||++++||+||++.+...                    +++.|+++||++++||+.++..+++|.|+||+|+
T Consensus       648 a~a~rma~~p~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~ef~~~~~~~~~v~y~E~~V~  727 (832)
T PLN03159        648 AYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTEKVVS  727 (832)
T ss_pred             HHHHHHhcCCCeEEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHhcCCCCceEEEEEecC
Confidence            99999999999999999998653211                    1356888999999999999987899999999999


Q ss_pred             ChHHHHHHHHhhccCCcEEEEcccCCCCchhhhccCCCCCCCccchhhhhhhcCCCCCCcccEEEEeeecc
Q 044163          688 DTKQLVSAVRSLERSNDLVIVGRQQAFSSQLEEEMRPWVEYEELGIIGDLLASADFVGGMMSILVIQSVES  758 (783)
Q Consensus       688 ~~~e~~~~i~~~~~~~DLvIVG~~~~~~s~~~~gl~~W~e~~eLG~igd~Las~df~~~~~sVLVvqq~~~  758 (783)
                      |++|++++||+++++|||+||||+|+..|++|+||+||+||||||+|||+|||+|| .+++||||||||+.
T Consensus       728 ~~~e~~~~l~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~-~~~~SVLVvQQ~~~  797 (832)
T PLN03159        728 NGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDF-AATVSVLVVQQYVG  797 (832)
T ss_pred             CHHHHHHHHHHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCC-CCceeEEEEEeecc
Confidence            99999999999998999999999988779999999999999999999999999999 99999999999974

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PRK04288 antiholin-like protein LrgB; Provisional Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed Back     alignment and domain information
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain Back     alignment and domain information
>COG1883 OadB Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit [Energy production and conversion] Back     alignment and domain information
>TIGR01109 Na_pump_decarbB sodium ion-translocating decarboxylase, beta subunit Back     alignment and domain information
>PRK10711 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query783
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 50.6 bits (120), Expect = 2e-06
 Identities = 86/614 (14%), Positives = 188/614 (30%), Gaps = 175/614 (28%)

Query: 11  INDANFQILIDNPD-------LTTCILFNKTTVYSK----GISLDEKVVTSVLPVVMIQS 59
           ++      +I + D       L   +L  +  +  K     + ++ K + S +     Q 
Sbjct: 46  LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105

Query: 60  GIIMGRSVFGKNKIYQDI-------MYRGREMLVVNTLAT------------MGGIYFVF 100
            ++    +  ++++Y D        + R +  L +                 + G     
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS---- 161

Query: 101 IVTVKMDKAMILRTVKKTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFLA 160
                           KTW               +   +   +  +  +    F+++   
Sbjct: 162 ---------------GKTW---------------VALDVCLSYKVQCKMDFKIFWLNL-K 190

Query: 161 SRSSFAVVVDAISEL-KLLNSELGQLTMSTAVIHEILGWLNSILSQLMRG-GLQRILVV- 217
           + +S   V++ + +L   ++      +  ++ I   +  + + L +L++    +  L+V 
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250

Query: 218 -HVGAVCALSIFTIIVLRLMIEWIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNY 276
            +V    A + F +   ++++      T   K V D  + A     I+L      L  + 
Sbjct: 251 LNVQNAKAWNAFNLSC-KILL------TTRFKQVTDF-LSAATTTHISLDHHSMTLTPDE 302

Query: 277 MIGAAMFGLVI-------P----AGPPLGSALVEKSELIITHF--FLPFFYIRLGQLTDI 323
           +    +    +       P       P   +++  +E I      +  + ++   +LT I
Sbjct: 303 VKS--LLLKYLDCRPQDLPREVLTTNPRRLSII--AESIRDGLATWDNWKHVNCDKLTTI 358

Query: 324 HSIESWRSFLALELILVSAYLGKVVGCILGLISFKASIRNALLFSCF---LNIKGIIELM 380
             IES  S   LE                    F          S F    +I     L+
Sbjct: 359 --IES--SLNVLEPAEYRKM-------------FDR-------LSVFPPSAHIP--TILL 392

Query: 381 HFLRWRSRKYVDIQTF-SELVLSNLVLTAIVTPLIAIFYKPQRRLESIARVDNCIRTLRT 439
             + W      D+    ++L   +LV        I+I   P   LE   +++N    L  
Sbjct: 393 SLI-WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI---PSIYLELKVKLEN-EYALHR 447

Query: 440 TLPSSELRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPV-HLKDLAGRAAPVVLPYN 498
           ++      I      +D             P       ++   HLK++           +
Sbjct: 448 SIVDH-YNIPKTFDSDD----------LIPPYLDQYFYSHIGHHLKNIE----------H 486

Query: 499 TQKYKLASNA-TD-RIMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQ------SIC---- 546
            ++  L      D R +   I++  ++  A         S  +T+ Q       IC    
Sbjct: 487 PERMTLFRMVFLDFRFLEQKIRHDSTAWNASG-------SILNTLQQLKFYKPYICDNDP 539

Query: 547 ---RLLKD--KFIP 555
              RL+     F+P
Sbjct: 540 KYERLVNAILDFLP 553
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query783
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.91
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.69
3olq_A319 Universal stress protein E; structural genomics, P 99.66
3loq_A294 Universal stress protein; structural genomics, PSI 99.65
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.63
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.6
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.8
3fdx_A143 Putative filament protein / universal stress PROT; 98.78
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.75
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.74
3dlo_A155 Universal stress protein; unknown function, struct 98.72
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.69
3tnj_A150 Universal stress protein (USP); structural genomic 98.66
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.65
2z08_A137 Universal stress protein family; uncharacterized c 98.64
3fg9_A156 Protein of universal stress protein USPA family; A 98.64
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.63
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.59
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.56
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.52
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.5
3dlo_A155 Universal stress protein; unknown function, struct 98.43
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.42
2z08_A137 Universal stress protein family; uncharacterized c 98.41
3tnj_A150 Universal stress protein (USP); structural genomic 98.39
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.38
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.38
3fdx_A143 Putative filament protein / universal stress PROT; 98.32
3fg9_A156 Protein of universal stress protein USPA family; A 98.29
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.28
1q77_A138 Hypothetical protein AQ_178; structural genomics, 98.24
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.21
3olq_A319 Universal stress protein E; structural genomics, P 98.04
3mt0_A290 Uncharacterized protein PA1789; structural genomic 98.02
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.0
1q77_A138 Hypothetical protein AQ_178; structural genomics, 97.96
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 97.92
3loq_A294 Universal stress protein; structural genomics, PSI 97.89
3cis_A 309 Uncharacterized protein; alpha/beta hydrolase, ATP 97.85
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.58
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 96.46
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.91  E-value=5.5e-25  Score=238.74  Aligned_cols=302  Identities=10%  Similarity=0.082  Sum_probs=217.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCChHHH----HHhhh--hHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHH
Q 044163           86 VVNTLATMGGIYFVFIVTVKMDKAMI----LRTVK--KTWNVSMTVLLVPLIISFLVAHMLRDHVPRINLKRFYFYISFL  159 (783)
Q Consensus        86 ~l~~la~iGl~~llF~~Gle~d~~~l----~~~~~--~~~~i~~~~~lip~~~g~~~~~~l~~~~~~~~~~~~~l~lg~~  159 (783)
                      ...-+.+-.+.++||.+|+|+|.+.+    ++.+|  .+...++.|+++|++++.    .+...      ...+.....+
T Consensus        59 l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~----~~~~~------~~~~~~gw~i  128 (388)
T 1zcd_A           59 MLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL----AFNYA------DPITREGWAI  128 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG----GGCCS------STTHHHHTSS
T ss_pred             HHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH----HHhcC------ChhhhhhhHH
Confidence            34556778888999999999999877    54444  478889999999998732    22211      1334566667


Q ss_pred             HhhccHHHHHHHHHhcccc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044163          160 ASRSSFAVVVDAISELKLL-NSELGQLTMSTAVIHEILGWLNSILSQLMRGGLQRILVVHVGAVCALSIFTIIVLRLMIE  238 (783)
Q Consensus       160 ls~TS~~Vv~~iL~el~ll-~s~~g~l~ls~aii~Di~~~ill~v~~~~~~~~~~~~~~~~~~~i~f~~~~~~v~r~~~~  238 (783)
                      .+.|+.+....++..++.. ++..++.+++.|++||+.+|++++++.+  ++ .. ..+ ++..+++.++.         
T Consensus       129 p~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt--~~-~~-~~~-l~~~~~~~~~~---------  194 (388)
T 1zcd_A          129 PAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT--ND-LS-MAS-LGVAAVAIAVL---------  194 (388)
T ss_dssp             SSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC--CC-CC-HHH-HHHHHHHHHHH---------
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc--CC-cc-HHH-HHHHHHHHHHH---------
Confidence            7889999999999998764 4556699999999999999999998853  21 11 111 11111121111         


Q ss_pred             HHHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHhcCCCC----CchhHHHHHHHHHHHHHHHHHH-
Q 044163          239 WIIRRTPERKPVKDVYIIAIMIGAITLGFIYEGLNSNYMIGAAMFGLVIPAGP----PLGSALVEKSELIITHFFLPFF-  313 (783)
Q Consensus       239 ~l~~r~~~~~~~~e~~~~~vl~~~l~~~~lae~lG~~~~lGaF~aGl~l~~~~----~~~~~l~~kl~~~~~~~f~PlF-  313 (783)
                      ++.+|..    .+....+.++ . +.+.+.++..|+|+.+|+|++|+++|..+    +..+++++++++++..+++|+| 
T Consensus       195 ~~l~r~~----v~~~~~y~~l-g-l~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~ilPlFa  268 (388)
T 1zcd_A          195 AVLNLCG----ARRTGVYILV-G-VVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFA  268 (388)
T ss_dssp             HHHHHTT----CCCTHHHHHH-H-HHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             HHHHHhc----chhHHHHHHH-H-HHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            2223321    1222233333 2 34456779999999999999999999863    3467899999999989999999 


Q ss_pred             HHHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChHHHHHHHHHhhhhHHHHHHHHh
Q 044163          314 YIRLGQLTDIHSIESWRSFLALELILVSAYLGKVVGCILGLISF----------KASIRNALLFSCFLNIKGIIELMHFL  383 (783)
Q Consensus       314 Fv~~G~~~dl~~l~~~~~~~~~~~ii~~~~~~K~~~~~l~~~~~----------~~~~~~~l~lg~~m~~rG~~~lii~~  383 (783)
                      |+..|+++|...+..... .....+++..+++|++|++..++..          |++++|...+|++++.++++++++++
T Consensus       269 FanaGv~l~~~~~~~l~~-~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftmsL~Ia~  347 (388)
T 1zcd_A          269 FANAGVSLQGVTLDGLTS-ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIAS  347 (388)
T ss_dssp             HHHCCCCCSSSCCCTHHH-HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHHHHHHH
T ss_pred             HHhcCeeecccchhhccC-hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHHHHHHH
Confidence            999999999853311111 1123444555899999955555544          99999999999999999999999999


Q ss_pred             hhcccCc--cchhhHHHHHHHHHHHHHhHHHHHHHhc
Q 044163          384 RWRSRKY--VDIQTFSELVLSNLVLTAIVTPLIAIFY  418 (783)
Q Consensus       384 i~~~~gi--i~~~~f~~lv~~~vl~t~i~~pl~~~l~  418 (783)
                      ++++.+.  +.++.+..+++++++++++++.++++.+
T Consensus       348 laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~~  384 (388)
T 1zcd_A          348 LAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRL  384 (388)
T ss_dssp             HHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC
T ss_pred             HhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9998876  3567788999999998888887776544
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query783
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.9
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.88
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.7
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.67
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.63
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.47
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.41
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.33
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.28
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.16
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 97.97
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 97.31
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.90  E-value=7.2e-09  Score=97.10  Aligned_cols=138  Identities=12%  Similarity=0.126  Sum_probs=91.8

Q ss_pred             eeEEEEeecCCChHHHHHHHHhhCCCCCCCceEEEEEeeccCCCCCcccccccc-----cc--cc-------cccchhHH
Q 044163          446 LRILCCIHHEDNVNGIITLLRATNPTEMNPICAYPVHLKDLAGRAAPVVLPYNT-----QK--YK-------LASNATDR  511 (783)
Q Consensus       446 lrILv~v~~~~~~~~ll~l~~~~~~~~~~p~~v~~lhlvel~~r~~~~~~~~~~-----~~--~~-------~~~~~~~~  511 (783)
                      -|||+|++..+.....++.+..++...  ...++++|+++..............     ..  .+       ......++
T Consensus         4 ~~ILvavD~s~~s~~al~~a~~la~~~--~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
T d1mjha_           4 KKILYPTDFSETAEIALKHVKAFKTLK--AEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKN   81 (160)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHTCCSS--CCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHHHHHHhc--CCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence            389999999999999999999998664  4689999998865432211000000     00  00       00112233


Q ss_pred             HHHHHHHHhhcCCCCeEEEEEEEEcCCCChHHHHHHHHHhcCCCEEEEcccCCCcccCCCcchhHHHHHHhccCCCceEE
Q 044163          512 IMRAVIKYSRSSGPAVAVQPFIMISPYDTMHQSICRLLKDKFIPLILVPLFPNGEVQGPNGTLHNFNINILHYAPCTVGI  591 (783)
Q Consensus       512 i~~af~~~~~~~~~~v~v~~~t~vs~~~~m~~dI~~~A~e~~a~lIIlp~h~~g~~~~~~~~~~~~~~~Vl~~ApCsVgI  591 (783)
                      .++.+..-..  ...+.++.....   .+..+.||+.|++.++|+||||.|..+.+  .+..+|++.++|++++||+|.|
T Consensus        82 ~l~~~~~~~~--~~gv~~~~~~~~---G~~~~~I~~~a~~~~~dliV~G~~~~~~~--~~~~~GS~a~~vl~~s~~pVlv  154 (160)
T d1mjha_          82 KMENIKKELE--DVGFKVKDIIVV---GIPHEEIVKIAEDEGVDIIIMGSHGKTNL--KEILLGSVTENVIKKSNKPVLV  154 (160)
T ss_dssp             HHHHHHHHHH--HTTCEEEEEEEE---ECHHHHHHHHHHHTTCSEEEEESCCSSCC--TTCSSCHHHHHHHHHCCSCEEE
T ss_pred             HHHHHHHHHH--hcCCeEEEEEEe---ccHHHHHhhhhhccccceEEeccCCCCcc--cccccCcHHHHHHhcCCCCEEE
Confidence            3333332222  135666666654   48999999999999999999999933322  3567899999999999999988


Q ss_pred             E
Q 044163          592 F  592 (783)
Q Consensus       592 l  592 (783)
                      +
T Consensus       155 V  155 (160)
T d1mjha_         155 V  155 (160)
T ss_dssp             E
T ss_pred             E
Confidence            5
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure