Citrus Sinensis ID: 044228
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 703 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LY77 | 1033 | Calcium-transporting ATPa | yes | no | 0.830 | 0.565 | 0.361 | 3e-98 | |
| Q9LIK7 | 1017 | Putative calcium-transpor | no | no | 0.807 | 0.558 | 0.353 | 1e-87 | |
| Q9LF79 | 1074 | Calcium-transporting ATPa | no | no | 0.894 | 0.585 | 0.310 | 9e-80 | |
| Q9LU41 | 1086 | Calcium-transporting ATPa | no | no | 0.789 | 0.511 | 0.314 | 2e-71 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.879 | 0.578 | 0.311 | 3e-71 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.812 | 0.557 | 0.285 | 1e-61 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.803 | 0.548 | 0.277 | 4e-58 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.822 | 0.568 | 0.282 | 4e-58 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.820 | 0.555 | 0.283 | 1e-56 | |
| Q37145 | 1020 | Calcium-transporting ATPa | no | no | 0.806 | 0.555 | 0.277 | 2e-55 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 231/639 (36%), Positives = 334/639 (52%), Gaps = 55/639 (8%)
Query: 75 HGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFC 134
G+P +T++L + K +++ A + LSA TMG A+VIC D TG L N + V+KF
Sbjct: 411 EGLPLAVTLTLAY-SMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEMKVTKFW 469
Query: 135 IGEKDVNNDVASEINQAVLQALERGIG----ASVLV------PEISVWPTTDWLVSWAKS 184
+G++ ++ D I+ VL L +G G SV V PE S PT L+SW
Sbjct: 470 LGQESIHEDSTKMISPDVLDLLYQGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWT-- 527
Query: 185 RSLN-------VDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNM 237
LN V Q +++ SS K GVL++ D +H++W G A +L M
Sbjct: 528 -VLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRRK---SDNTVHVHWKGAAEMVLAM 583
Query: 238 CSYYYDSEGK-SFEIKGEKRRFQKLIKDMEDSGLRPIAFACG-QTEVSEIKENGLHLLAL 295
CS+YY S G K R Q +I+ M S LR IAFA + S ++E+GL L+ +
Sbjct: 584 CSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAFAHKIASNDSVLEEDGLTLMGI 643
Query: 296 AGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELG---NFRPESNDIALEG 348
GL++ + VE + AGV I +++ D + +A E G + + D +EG
Sbjct: 644 VGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHNDKDEEDAVVEG 703
Query: 349 EQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEA 408
QFR ERM K+D + +M +DKLL+V+ + KGHVVA G T D PALKEA
Sbjct: 704 VQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAV-TGDGTNDAPALKEA 762
Query: 409 DVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLL 466
D+G++ + TE+A+E SDIVI S+ +LK GRC Y NIQKF + QLT + L+
Sbjct: 763 DIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALV 822
Query: 467 ITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVM 526
I + + E P+T++QL+WV IM LG L + E E + P RT++L+ VM
Sbjct: 823 INFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALITNVM 882
Query: 527 WKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAV 586
W++ VQ L Q+ VLLI QF G I + ++++ + FN+F LCQVFN+F+A + KK V
Sbjct: 883 WRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKDTLIFNTFVLCQVFNEFNAREMEKKNV 942
Query: 587 QPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVN 646
+ + F+ + I I +QV++VEF A RLNG WG C LA L W I
Sbjct: 943 FKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQWGTCIALASLSWPIGFFTK 1002
Query: 647 FIAGSFLDWSLSGILRLEFSRRQQHRPYVSFLSIPFSMF 685
FI S P++S+ P S+F
Sbjct: 1003 FIPVS-------------------ETPFLSYFKNPRSLF 1022
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 213/602 (35%), Positives = 324/602 (53%), Gaps = 34/602 (5%)
Query: 67 TVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCN 126
T++ +A+ G+P +T++L + K ++ +A + LSA TMG A+VIC D TG L N
Sbjct: 399 TIIVVAIPEGLPLAVTLTLAY-SMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLN 457
Query: 127 RVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG----ASVLVP------EISVWPTTD 176
++ V+ F G + + AS ++Q V++ +G+ SV E S PT
Sbjct: 458 QMKVTDFWFG---LESGKASSVSQRVVELFHQGVAMNTTGSVFKAKAGTEYEFSGSPTEK 514
Query: 177 WLVSWAKSR----SLNVDQNLSIVQYRKLSSHNKVCGVLMKING-GDEDKIMHINWSGTA 231
++SWA V + +V +S K GVLMK G E+ ++H W G A
Sbjct: 515 AILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNVVH--WKGAA 572
Query: 232 STILNMCSYYYDSEGKSFEIK-GEKRRFQKLIKDMEDSGLRPIAFACGQT--EVSEIKEN 288
IL MCS + D G E+K +K +F+K+I+ M LR IAFA + + ++KE
Sbjct: 573 EKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSEDNEDNKKLKEE 632
Query: 289 GLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE---S 341
L LL + G+++ +K VE + AGV I +++ D + +A E G PE +
Sbjct: 633 KLSLLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGILTPEDEMN 692
Query: 342 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRD 401
++ LEGE+FR ER+ K++ + +M DKLL+V+ KE GHVVA G T D
Sbjct: 693 SEAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAV-TGDGTND 751
Query: 402 TPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKLQLT 459
PALKEAD+G++ + TE+A+E SDIVI S+ +LK GRC Y NIQKF + QLT
Sbjct: 752 APALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLT 811
Query: 460 GCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTK 519
+ L+I V + + P+T++QL+WV IM LG L + E + + P R
Sbjct: 812 VNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVA 871
Query: 520 SLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAM 579
L+ +MW++ Q Q+ VLL+ QF G+ I + ++ + FN+F LCQVFN+F+A
Sbjct: 872 PLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKNTLIFNTFVLCQVFNEFNAR 931
Query: 580 CLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPW 639
L KK V + K F+ + V+ + +QV++VEF A +RLN WG+C +A W
Sbjct: 932 SLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAIAAASW 991
Query: 640 GI 641
I
Sbjct: 992 PI 993
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 298 bits (763), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 213/685 (31%), Positives = 342/685 (49%), Gaps = 56/685 (8%)
Query: 3 NLSLAVTVLIAFVALIRLLWRKHSGDDNELPE-LKGNVSVGTVVKLFERFLLKPQGKISI 61
++ LAV + + L R + H+ D+N P+ +KG VG V+ + +
Sbjct: 378 SIGLAVAAAVLVILLTRY-FTGHTKDNNGGPQFVKGKTKVGHVIDDV----------VKV 426
Query: 62 LVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTG 121
L A+T+V +AV G+P +T++L + K++ + A + LSA TMG A+ IC D TG
Sbjct: 427 LTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK-ALVRRLSACETMGSATTICSDKTG 485
Query: 122 GLLCNRVDV-SKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPE------ISVWPT 174
L N++ V + G+K + + I V++ + + S+ VPE S PT
Sbjct: 486 TLTLNQMTVVESYAGGKKTDTEQLPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPT 545
Query: 175 TDWLVSWAKSRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTA 231
++ W +N + SI+ +S K GV +K G+ +H++W G +
Sbjct: 546 EKAILGWGVKLGMNFETARSQSSILHAFPFNSEKKRGGVAVKTADGE----VHVHWKGAS 601
Query: 232 STILNMCSYYYDSEGKSFEIKGEKRRF-QKLIKDMEDSGLRPIAFACGQTEVSEIK---- 286
+L C Y D +G + +K F + I DM LR +A A E ++
Sbjct: 602 EIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEE 661
Query: 287 -------ENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELG 335
E+ L LLA+ G+++ +K +V +NAGV++ +V+ D + +A E G
Sbjct: 662 LSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECG 721
Query: 336 NFRPE---SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVA 392
+ S +EG+ FRE+ ER D +++MG DKLLLVQ+ + +GHVVA
Sbjct: 722 ILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVA 781
Query: 393 FFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNI 450
G T D PAL EAD+G+ TE+A+E SDI+I S++ +++ GR Y NI
Sbjct: 782 VTG-DGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANI 840
Query: 451 QKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPV 510
QKF + QLT + L+I +V + + P+T++QL+WV IM LG L + E +
Sbjct: 841 QKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLM 900
Query: 511 TNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMT------- 563
PP R + L+ +MW++ +Q + QV VLL F G I G+ ++ + T
Sbjct: 901 GRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTII 960
Query: 564 FNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRL 623
FN+F LCQ FN+F+A +K + V+K F+ + VI + +QV++VEF A +L
Sbjct: 961 FNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKL 1020
Query: 624 NGMHWGICFILAVLPWGIHCAVNFI 648
N W IC + V+ W + FI
Sbjct: 1021 NWKQWLICVGIGVISWPLALVGKFI 1045
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 192/611 (31%), Positives = 307/611 (50%), Gaps = 56/611 (9%)
Query: 75 HGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDV-SKF 133
G+P +T++L + K++ + A + LSA TMG A+ IC D TG L N++ V +
Sbjct: 453 EGLPLAVTLTLAYSMRKMMADK-ALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETY 511
Query: 134 CIGEKDVNNDVASEINQAVLQALERGIG----ASVLVP------EISVWPTTDWLVSWAK 183
G K D S ++ ++ + G+ ++ P EIS PT ++SWA
Sbjct: 512 AGGSKMDVADNPSGLHPKLVALISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSWAY 571
Query: 184 SRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSY 240
+ D +I+ +S K GV + GD + +H W G A +L C+
Sbjct: 572 KLGMKFDTIRSESAIIHAFPFNSEKKRGGV--AVLRGDSEVFIH--WKGAAEIVLACCTQ 627
Query: 241 YYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIK------------EN 288
Y DS G I+ +K F+ I M + LR +A AC E++++ E+
Sbjct: 628 YMDSNGTLQSIESQKEFFRVAIDSMAKNSLRCVAIACRTQELNQVPKEQEDLDKWALPED 687
Query: 289 GLHLLALAGLREEIKSTV-EALR---NAGVRIILVSEDELLAVTEVACELGNFRPESNDI 344
L LLA+ G+++ + V EA+R +AGV++ +V+ D L +A E G ++ +
Sbjct: 688 ELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSDTEAV 747
Query: 345 A---LEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRD 401
+EG+ FREL+ ER +T+MG DKLLLVQ ++ G VVA G T D
Sbjct: 748 EPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKNGDVVAVTG-DGTND 806
Query: 402 TPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKLQLT 459
PAL EAD+G++ TE+A+E SDI+I S++ +++ GR Y NIQKF + QLT
Sbjct: 807 APALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLT 866
Query: 460 GCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTK 519
+ L+I +V + + P+ ++QL+WV IM LG L + E + P R +
Sbjct: 867 VNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRRE 926
Query: 520 SLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNR-------DIRKAMTFNSFTLCQV 572
L+ +MW++ VQ QV VLL+ FAG I G+N +++ M FN+F +CQ+
Sbjct: 927 PLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFVMCQI 986
Query: 573 FNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAV----QVLVVEFATSLAGYQRLNGMHW 628
FN+F+A +K + V + +N +FV ++ V Q+++V F A RL W
Sbjct: 987 FNEFNA----RKPDEMNVFRGVNKNPLFVAIVGVTFILQIIIVTFLGKFAHTVRLGWQLW 1042
Query: 629 GICFILAVLPW 639
I+ ++ W
Sbjct: 1043 LASIIIGLVSW 1053
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 211/678 (31%), Positives = 340/678 (50%), Gaps = 60/678 (8%)
Query: 4 LSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGNVSVGTVVKLFERFLLKPQGKISILV 63
+ L V ++ FV ++R + H+ ++ P+ G + FE L + I
Sbjct: 379 VGLTVAGVVLFVLVVRY-FTGHTKNEQGGPQFIGGKT------KFEHVL---DDLVEIFT 428
Query: 64 SALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGL 123
A+T+V +AV G+P +T++L + K++ + A + LSA TMG A+ IC D TG L
Sbjct: 429 VAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK-ALVRRLSACETMGSATTICSDKTGTL 487
Query: 124 LCNRVDVSKFCIGEKDVNN-DVASEINQAVLQALERGIG----ASVLVPE-----ISVWP 173
N + V + G + +++ D +S++ A L GI SV E +S P
Sbjct: 488 TLNEMTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGEIQVSGSP 547
Query: 174 TTDWLVSWAKSRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGT 230
T +++WA ++ D S VQ+ +S K GV +K D +HI+W G
Sbjct: 548 TERAILNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVK----SPDSSVHIHWKGA 603
Query: 231 ASTILNMCSYYYDSEGKSFEIKGEKRR--FQKLIKDMEDSGLRPIAFACGQTEVS----- 283
A +L C++Y D E +SF E + + I DM LR +A A E
Sbjct: 604 AEIVLGSCTHYMD-ESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTD 662
Query: 284 -------EIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVAC 332
E+ E+ L LLA+ G+++ +K++V + AGV++ +V+ D + +A
Sbjct: 663 EEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIAL 722
Query: 333 ELGNFRPESNDIA---LEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGH 389
E G +S+ +EG+ FR + ER + +++MG DKLLLVQ+ K +GH
Sbjct: 723 ECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRRGH 782
Query: 390 VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAY 447
VVA G T D PAL EAD+G+ + TE+A+E SDI+I S++ +++ GR Y
Sbjct: 783 VVAVTG-DGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVY 841
Query: 448 CNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQ 507
NIQKF + QLT + L+I +V + E P+T++QL+WV IM LG L + E
Sbjct: 842 ANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTD 901
Query: 508 EPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVI------PGMNRDIRKA 561
+ P R + L+ +MW++ +Q + QV VLLI F G I P R ++
Sbjct: 902 HLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAER-VKNT 960
Query: 562 MTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQ 621
+ FN+F +CQVFN+F+A + + VL+ F+ + I I +QV++VEF + A
Sbjct: 961 VIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTT 1020
Query: 622 RLNGMHWGICFILAVLPW 639
+L+ W +C + + W
Sbjct: 1021 KLDWEMWLVCIGIGSISW 1038
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 175/612 (28%), Positives = 299/612 (48%), Gaps = 41/612 (6%)
Query: 65 ALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLL 124
A+T++ +AV G+P +T+SL F ++L+ + A ++L+A TMG ++ IC D TG L
Sbjct: 399 AVTIIVVAVPEGLPLAVTLSLAFAMKQLM-SDRALVRHLAACETMGSSTCICTDKTGTLT 457
Query: 125 CNRVDVSKFCI-------GEKDVNNDVASEINQAVLQALERGIGASVLV-----PEISVW 172
N + V+K I E++ +++ ++ ++QA+ + G+ V+ +I
Sbjct: 458 TNHMVVNKVWICENIKERQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGS 517
Query: 173 PTTDWLVSWAKSRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSG 229
PT ++ + +VD + I++ +S K VL +GG + G
Sbjct: 518 PTERAILEFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGK----VRAFCKG 573
Query: 230 TASTILNMCSYYYDSEGKSFEIKGEK-RRFQKLIKDMEDSGLRPIAFA---CGQTEVSEI 285
+ +L MC DS G+S + EK +I+ LR + + ++
Sbjct: 574 ASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGDL 633
Query: 286 KENGLHLLALAGLREEIK----STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES 341
G L+A+ G+++ ++ V+ + AG+ + +V+ D + +A E G +
Sbjct: 634 PNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILT--A 691
Query: 342 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRD 401
+A+EG FR L E A L + +M L DK LV ++ G VVA G T D
Sbjct: 692 GGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTG-DGTND 750
Query: 402 TPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKLQLT 459
PAL EAD+G+ TE+A+E +D++I +++ + K GR Y NIQKF + QLT
Sbjct: 751 APALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLT 810
Query: 460 GCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTK 519
L+I V+ I +P+T++QL+WV IM LG L + E ++ + P RT
Sbjct: 811 VNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTA 870
Query: 520 SLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRD----IRKAMTFNSFTLCQVFNQ 575
S + + MW++ Q + Q++VL I FAG+ I +N + + FNSF CQVFN+
Sbjct: 871 SFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNE 930
Query: 576 FDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILA 635
++ + K V + K F+ V + QV++VEF + A L+ HW +C ++
Sbjct: 931 VNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIG 990
Query: 636 ----VLPWGIHC 643
+L G+ C
Sbjct: 991 SVSMILAVGLKC 1002
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 168/605 (27%), Positives = 292/605 (48%), Gaps = 40/605 (6%)
Query: 65 ALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLL 124
++T++ +AV G+P +T+SL F +KL+ + A ++L+A TMG ++ IC D TG L
Sbjct: 399 SVTIIVVAVPEGLPLAVTLSLAFAMKKLM-SDRALVRHLAACETMGSSTCICTDKTGTLT 457
Query: 125 CNRVDVSKFCIGEKDVNNDVASE----------INQAVLQALERGIGASVLVP-----EI 169
N + V+K I +K S+ + +LQ + + G+ V+ +I
Sbjct: 458 TNHMVVNKVWICDKVQERQEGSKESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQI 517
Query: 170 SVWPTTDWLVSWAK--SRSLNVD-QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHIN 226
PT ++ + N + I++ +S K VL+ + GG
Sbjct: 518 LGSPTERAILEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCK-- 575
Query: 227 WSGTASTILNMCSYYYDSEGKSFEIKGEK-RRFQKLIKDMEDSGLRPIAFA---CGQTEV 282
G + +L MC DS G+S + E+ +I+ LR + +
Sbjct: 576 --GASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPS 633
Query: 283 SEIKENGLHLLALAGLREEIK----STVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338
E+ + G ++A+ G+++ ++ V+ + AG+ + +V+ D + +A E G +
Sbjct: 634 GELPDGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIY- 692
Query: 339 PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSS 398
+A+EG +FR+L+ E A + + +M L DK LV ++ G VVA G
Sbjct: 693 -TEGGLAIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAVTG-DG 750
Query: 399 TRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKL 456
T D PAL EAD+G+ TE+A+E +D++I +++ + + GR Y NIQKF +
Sbjct: 751 TNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQF 810
Query: 457 QLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPAR 516
QLT L+I V+ I +P+T++QL+WV IM LG L + E ++ + P
Sbjct: 811 QLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIA 870
Query: 517 RTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMN----RDIRKAMTFNSFTLCQV 572
RT S + K MW++ A Q + Q++VL I FAG+ + ++ + + FNSF CQV
Sbjct: 871 RTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQV 930
Query: 573 FNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICF 632
FN+ ++ + K V + F V + + QV++VEF + A L+ HW +
Sbjct: 931 FNEINSREIEKINVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSI 990
Query: 633 ILAVL 637
++ L
Sbjct: 991 LIGSL 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 176/624 (28%), Positives = 290/624 (46%), Gaps = 46/624 (7%)
Query: 42 GTVVKLFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQ 101
G V L + + ++ +A+T++ +AV G+P +T+SL F +KL+ N A +
Sbjct: 359 GMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLM-NDKALVR 417
Query: 102 NLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGE--KDV-NNDVASEINQAV------ 152
+LSA TMG A IC D TG L N + V K I E K V +N ++ E+N V
Sbjct: 418 HLSACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLS 477
Query: 153 --LQALERGIGASVLVPE-----ISVWPTTDWLVSWAKSRSLNVDQNLSI---VQYRKLS 202
LQ + A V+ + + PT ++ + D S V+ +
Sbjct: 478 LLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGLEGVHDAEYSACTKVKVEPFN 537
Query: 203 SHNKVCGVLMKINGGDEDKIMHINW--SGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQ 259
S K VL+ + G W G + IL MC D +G + + + +++
Sbjct: 538 SVKKKMAVLISLPSGTS------RWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNIL 591
Query: 260 KLIKDMEDSGLRPIAFACGQTEVSEI-----KENGLHLLALAGLREEI----KSTVEALR 310
I LR + A + + +G L+A+ G+++ + K V+
Sbjct: 592 DTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCM 651
Query: 311 NAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370
+AG+ + +V+ D + +A E G + +A+EG +F + E + ++ +M
Sbjct: 652 SAGITVRMVTGDNINTAKAIAKECGILTEDG--VAIEGPEFHSKSPEEMRDLIPNIQVMA 709
Query: 371 SCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI 430
L DK LV + V G T D PAL EAD+G+ TE+A+E +D+++
Sbjct: 710 RSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIV 769
Query: 431 --STVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWV 488
+++ + + GR Y NIQKF + QLT L+I V+ I +P+T++QL+WV
Sbjct: 770 LDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWV 829
Query: 489 YCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAG 548
IM LG L + E + E + PP R+ +S + KVMW++ Q L Q+ VL F G
Sbjct: 830 NMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGG 889
Query: 549 QV---IPGMN-RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVI 604
+ I G + + I + FNSF CQVFN+ ++ + K V ++ F+ V +
Sbjct: 890 ESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATV 949
Query: 605 AVQVLVVEFATSLAGYQRLNGMHW 628
A QV+++EF + A LN HW
Sbjct: 950 AFQVVIIEFLGTFASTVPLNWQHW 973
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 177/625 (28%), Positives = 292/625 (46%), Gaps = 48/625 (7%)
Query: 42 GTVVKLFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQ 101
G V L + + ++ +A+T++ +AV G+P +T+SL F +KL+ N A +
Sbjct: 381 GMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLM-NDKALVR 439
Query: 102 NLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGE--KDV-NNDVASEINQAVL----- 153
+LSA TMG A IC D TG L N + V K I E K V +N ++ E+N V
Sbjct: 440 HLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKSVTSNTISGELNSVVSSSTLS 499
Query: 154 ---QALERGIGASVLVPE-----ISVWPTTDWLVSWAKSRSLNVDQNL---SIVQYRKLS 202
Q + A V+ + + PT ++ + + D + V+ +
Sbjct: 500 LLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGLKGDHDAEYRACTKVKVEPFN 559
Query: 203 SHNKVCGVLMKINGGDEDKIMHINW--SGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQ 259
S K VL+ + G W G + IL MC D +G + + + +++
Sbjct: 560 SVKKKMAVLISLPNGTS------RWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNIL 613
Query: 260 KLIKDMEDSGLRPIAFACGQTEVSEI-----KENGLHLLALAGLREEI----KSTVEALR 310
I LR + A + + +G L+A+ G+++ + K V+
Sbjct: 614 DTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCM 673
Query: 311 NAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLD-SMTLM 369
+AG+ + +V+ D + +A E G + +A+EG +F STE M L ++ +M
Sbjct: 674 SAGITVRMVTGDNINTAKAIAKECGILTEDG--VAIEGPEFHS-KSTEEMRDLILNIQVM 730
Query: 370 GSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIV 429
L DK LV + V G T D PAL EAD+G+ TE+A+E +D++
Sbjct: 731 ARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790
Query: 430 I--STVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIW 487
+ +++ + + GR Y NIQKF + QLT L+I V+ I+ +P+T++QL+W
Sbjct: 791 VLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSAPLTAVQLLW 850
Query: 488 VYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFA 547
V IM LG L + E + E + PP R+ +S + K MW++ Q L Q+ VL F
Sbjct: 851 VNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLYQLFVLGALMFG 910
Query: 548 GQV---IPGMN-RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIV 603
G+ I G + + I + FNSF CQVFN+ ++ + K V ++ F+ V
Sbjct: 911 GERLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAAT 970
Query: 604 IAVQVLVVEFATSLAGYQRLNGMHW 628
+A QV+++EF + A LN HW
Sbjct: 971 VAFQVVIIEFLGTFASTVPLNWQHW 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 169/609 (27%), Positives = 290/609 (47%), Gaps = 42/609 (6%)
Query: 75 HGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFC 134
G+P +T+SL F +K++ N A +NL+A TMG A+ IC D TG L N + V K C
Sbjct: 414 EGLPLAVTLSLAFAMKKMM-NDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKAC 472
Query: 135 IGE--KDVNN-----DVASEINQA----VLQALERGIGASVLV-----PEISVWPTTDWL 178
I E K+VN AS I ++ +LQ++ G ++V EI PT L
Sbjct: 473 ICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETAL 532
Query: 179 VSWAKSRSLN---VDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTIL 235
+ + S + V Q ++V+ +S K GV++++ ++ + G + +L
Sbjct: 533 LEFGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIEL----PERHFRAHCKGASEIVL 588
Query: 236 NMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQ--TEVS---EIKENG 289
+ C Y + +G+ + + + +I++ LR + A + E S I G
Sbjct: 589 DSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGG 648
Query: 290 LHLLALAGLREEI----KSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIA 345
+ + G+++ + K +V ++AG+ + +V+ D L +A E G + IA
Sbjct: 649 YTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILT--DDGIA 706
Query: 346 LEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPAL 405
+EG +FRE + E + + + +M DK LV+ + V G T D PAL
Sbjct: 707 IEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPAL 766
Query: 406 KEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKLQLTGCAS 463
EAD+G+ TE+A+E +D++I +++ + K GR Y NIQKF + QLT
Sbjct: 767 HEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826
Query: 464 GLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLD 523
L++ ++ + +P+T++QL+WV IM LG L + E + + P R + +
Sbjct: 827 ALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFIS 886
Query: 524 KVMWKHAAVQVLCQVVVLLIFQFAGQVIPGM---NRDIR-KAMTFNSFTLCQVFNQFDAM 579
VMW++ Q L Q+V++ Q G+ + G+ + D+ + FN F CQVFN+ +
Sbjct: 887 NVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSR 946
Query: 580 CLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPW 639
+ K V +LK F+ V + QV+++E + A LN W + IL L
Sbjct: 947 EMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGM 1006
Query: 640 GIHCAVNFI 648
+ A+ I
Sbjct: 1007 PVAAALKMI 1015
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 703 | ||||||
| 255581776 | 1042 | cation-transporting atpase plant, putati | 0.982 | 0.663 | 0.464 | 1e-176 | |
| 225447582 | 1063 | PREDICTED: putative calcium-transporting | 0.918 | 0.607 | 0.419 | 1e-129 | |
| 357495317 | 1052 | Calcium-transporting ATPase [Medicago tr | 0.950 | 0.634 | 0.396 | 1e-127 | |
| 357468545 | 978 | Plasma membrane calcium-transporting ATP | 0.876 | 0.629 | 0.377 | 1e-109 | |
| 225451324 | 1057 | PREDICTED: calcium-transporting ATPase 1 | 0.883 | 0.587 | 0.358 | 1e-104 | |
| 449511812 | 804 | PREDICTED: calcium-transporting ATPase 1 | 0.880 | 0.769 | 0.372 | 1e-102 | |
| 449453746 | 1023 | PREDICTED: calcium-transporting ATPase 1 | 0.880 | 0.605 | 0.372 | 1e-101 | |
| 225437164 | 1081 | PREDICTED: calcium-transporting ATPase 1 | 0.867 | 0.564 | 0.350 | 1e-101 | |
| 359497232 | 1155 | PREDICTED: calcium-transporting ATPase 1 | 0.869 | 0.529 | 0.360 | 3e-99 | |
| 359496865 | 1082 | PREDICTED: calcium-transporting ATPase 1 | 0.867 | 0.563 | 0.366 | 4e-99 |
| >gi|255581776|ref|XP_002531689.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223528665|gb|EEF30680.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 336/723 (46%), Positives = 462/723 (63%), Gaps = 32/723 (4%)
Query: 2 ENLSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGNVSVGTVVKLFERFLLKPQGKISI 61
+ L L++++LIAF+ L+ L++++ +D+ LPELKGN + ++++FE +P+G+I +
Sbjct: 330 DKLVLSISLLIAFIVLMGLVFKRQRRNDDILPELKGNTKIDVLIEIFESMFWRPRGRICV 389
Query: 62 LVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTG 121
L LT +AI +QHGM F IT SL +W KL ++ KPQ LSA TMG+ +VICID +G
Sbjct: 390 LTGVLTAIAIGMQHGMSFAITASLSYWNGKLELSG-VKPQTLSACGTMGLVTVICIDASG 448
Query: 122 GLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSW 181
GL+CN+++V++F IGE+++N+D E + VL+AL +GIGAS LV SV P D L +W
Sbjct: 449 GLICNQMEVNEFFIGEENMNDDEVCETSPVVLEALGQGIGASTLVTGGSVRPIDDLLAAW 508
Query: 182 AKSR-SLNV---DQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNM 237
AKSR N+ DQ S++ + L S+ V++K NG DE I+H++ G ASTILN
Sbjct: 509 AKSRWGANMELSDQCFSVLDHGILESNKNCSRVVIKKNGDDEG-ILHLHLKGDASTILNF 567
Query: 238 CSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAG 297
CS+YY+++ + IK ++R F+++I++ME GL IA+AC Q E ++ + LHLLAL G
Sbjct: 568 CSHYYNTKWEVHAIKDQRRDFEQVIENMESRGLTAIAYACKQMETTKSRAEHLHLLALVG 627
Query: 298 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 357
L+ + VEAL NAGV I LVS+DEL AV ++A LG P S+ I LEG Q R+L T
Sbjct: 628 LKCSFQEIVEALTNAGVSIKLVSQDELSAVRDIAHLLGINPPPSDGIELEGAQIRDLADT 687
Query: 358 ERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENK 417
R+ K++ ++MGSCL+ DKLL+V + K+ GHVVAF GG ST D PALKEAD+ IT+EN+
Sbjct: 688 GRIGKIEEASVMGSCLSEDKLLIVNSLKQNGHVVAFVGGLSTNDAPALKEADLAITKENQ 747
Query: 418 CTEMARECSDIVIS---TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLI 474
TEMAR+CSDIV+S ++ SL +LK GRCAY NIQ FT+LQLT C SGLLI LV +
Sbjct: 748 STEMARKCSDIVLSNECSLRSLPEVLKYGRCAYNNIQNFTQLQLTACISGLLINLVAAIC 807
Query: 475 LEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQV 534
L +SP+ +IQLIW+ I+ +LG MM ME + QE + NPPA R + LL K +WK A Q
Sbjct: 808 LWDSPLPAIQLIWMNFILCVLGYPMMVMELRSQELIANPPANRAEPLLTKAIWKTIATQA 867
Query: 535 LCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKI 594
L Q +L GQVIP +N K++ FNSF LCQVFNQF AM + K V VL
Sbjct: 868 LSQFALLTTLHLVGQVIPSINEHTWKSLVFNSFMLCQVFNQFKAMGIRSKEVAEAVLHHY 927
Query: 595 NFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLD 654
FL+ V +QVL+ EF TSL ++RLN + W F +A+L WG+ AV I+ F
Sbjct: 928 WFLLALGTVTVMQVLITEFGTSLTRFKRLNLVQWVTSFSIALLSWGLGNAVELISVLFSK 987
Query: 655 WSLSGILRLEFSRR--QQHRPY------------VSFLSIPFSMFLYISISHYYNPDNSF 700
W FSR H VS L PFS++ S+ +Y+ PDNS
Sbjct: 988 W---------FSRSCGSNHAGSSSRRRRRPLSFVVSLLGSPFSIYFLFSLPYYFYPDNSQ 1038
Query: 701 TFR 703
FR
Sbjct: 1039 AFR 1041
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225447582|ref|XP_002270457.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 284/677 (41%), Positives = 415/677 (61%), Gaps = 31/677 (4%)
Query: 3 NLSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGNVSVGTVVKLFERFLLKPQGKISIL 62
N +L + + V I + K+ N + LKG + V +KL ++ L K GK+++L
Sbjct: 374 NFALLMPIFCVVVKFILFFFWKNK-KSNVVQTLKGAIGVEWAIKLLKQILDKG-GKMNLL 431
Query: 63 VSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGG 122
+ + + +QHG+ VI++ L +W + + PQNLSA TMGI +VICID +GG
Sbjct: 432 AAIIPTLVFGLQHGVKIVISICLNYWN-VIRGSSEVTPQNLSAPGTMGIVTVICIDASGG 490
Query: 123 LLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWA 182
LL ++D+S+F +G++ +++ SE++ AVL+AL G+GAS LVPEI PT D L+SWA
Sbjct: 491 LLYEKMDISRFWMGQEAIDDQSHSEVSPAVLEALSSGVGASALVPEIHSIPTDDVLISWA 550
Query: 183 K-SRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMC 238
+ +N++ Q +I+ Y KLSS + GV+++ NG DE+ IMH++W G A TIL+MC
Sbjct: 551 ELVWGMNIEFLKQRFTIINYGKLSSTKEGRGVVLRKNGSDEN-IMHLHWKGDAKTILDMC 609
Query: 239 SYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL 298
S+Y G+ I+ +K F+K+IK+M+D L+PIAFA QT+V +++E+GL LLAL G+
Sbjct: 610 SHYSKCRGEIHGIEDQKSEFEKVIKEMQDDSLQPIAFAYKQTDVEQLEEDGLILLALVGV 669
Query: 299 R----EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFREL 354
+ EE+KS V+ ++AG+RI LVSE+EL +ACELG F P S + LEG++FREL
Sbjct: 670 KYQFQEEMKSVVKNFQSAGIRIKLVSENELSTSRAMACELGIFTPGSINGILEGQEFREL 729
Query: 355 NSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE 414
R ++D +T+MGS L DKLL+V++ KEKG VVA+ GG + RD P LKEAD+GIT
Sbjct: 730 TYDARKERVDQVTVMGSSLPEDKLLMVKSLKEKGDVVAYIGGWTGRDAPVLKEADIGITV 789
Query: 415 ENKCTEMARECSDIVIS---TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVT 471
TEM E SDIV++ + SL+P+L+ GR Y I KF ++QL S LLIT V
Sbjct: 790 GTWSTEMTNEISDIVLASDKSFSSLIPVLEYGRHDYHKIGKFIEIQLISNISVLLITAVE 849
Query: 472 TLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAA 531
T+ L +S IT +Q ++V I+ +LGGL++ M+ + +E N P +R S++ K MW + +
Sbjct: 850 TICLGDSSITIVQFLYVNLILGLLGGLLLGMKPQCKELRNNQPDKRNASIITKEMWINIS 909
Query: 532 VQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVL 591
+QV Q +VLL+FQF G I G N RKAM FN F LCQVFN L K P L
Sbjct: 910 LQVSYQAIVLLVFQFKGTAIHGTNPMDRKAMVFNGFILCQVFNYVHP--LFKAGKYPFWL 967
Query: 592 KKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGS 651
+ F V+ V+V+ T L G L+ + W CF++A WG++ A I+
Sbjct: 968 FLVPFTVLHVVVV----------TELWG--ELSRVQWAFCFLIAAFAWGVNLAAVLIS-I 1014
Query: 652 FLDWSL-SGILRLEFSR 667
+ W S +L FSR
Sbjct: 1015 LIKWQFGSAVLPNGFSR 1031
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357495317|ref|XP_003617947.1| Calcium-transporting ATPase [Medicago truncatula] gi|355519282|gb|AET00906.1| Calcium-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 279/703 (39%), Positives = 411/703 (58%), Gaps = 35/703 (4%)
Query: 1 MENLSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGN-VSVGTVVKLFERFLLKPQGKI 59
++ SL V L+A V IRL+ +K D LP++KGN VSVG + +L E +P+G+I
Sbjct: 347 LDKASLFVFTLVALVLFIRLICKKDV-DGGGLPDIKGNNVSVGLLTQLLENIFSRPRGRI 405
Query: 60 SILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDV 119
SIL +VV + VQHG+P ++T+SL + +K++++ A +LS TMG+ +VICIDV
Sbjct: 406 SILAGLFSVVILCVQHGVPIMVTLSLHYQNDKVVLDQEAVLNDLSTCTTMGLVTVICIDV 465
Query: 120 TGGLLCNRVDVSKFCIGE--KDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDW 177
+G ++ ++V+K IGE D+N SE VL L++G+ SVL +S P ++
Sbjct: 466 SGEIISKPMEVNKIWIGEAETDINKVEESETCPVVLDKLKQGVALSVLASRLSPSPMSNS 525
Query: 178 LVSWA-KSRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTAST 233
VS A K+ ++++ +N I+++ KL S+ + GVL++ N D +++MH++WSG AST
Sbjct: 526 FVSLAEKTWEMDIESFRENFHILEHGKLDSNQEGGGVLVR-NVRDNEQVMHLHWSGAAST 584
Query: 234 ILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLL 293
IL MCS YYD +GK ++ +K ++ ++I+DMED+GL+PIA A QT+V E+K++ L LL
Sbjct: 585 ILEMCSQYYDRQGKCHSMENQKIKYGQVIQDMEDNGLKPIALAYRQTQVQELKQDELTLL 644
Query: 294 ALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGE 349
AL GL RE K ++ L+N G+ I LVS D+++ V E ACELG P D LEG+
Sbjct: 645 ALVGLKYKCRESTKKALKNLQNDGIHIKLVSTDDIMVVKETACELGIEVPV--DGHLEGK 702
Query: 350 QFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGS---STRDTPALK 406
+ + LN R+ KL MGS DKLL+V+ ++KG VVAF + + LK
Sbjct: 703 ELQYLNGKARLVKLGKAIAMGSFSPEDKLLMVRCLQDKGDVVAFIETQQLMTNHTSEVLK 762
Query: 407 EADVGITEENKCTEM--ARECSDIVISTVGSLLPILKLGRCAYCNIQKFTKLQLTGCASG 464
AD GI N +++ +RE S + I+ +L PI+K GR Y NIQKF +LQLT SG
Sbjct: 763 IADAGIVH-NSLSKLIGSREGSGLSITCFSALKPIVKAGRSEYHNIQKFIQLQLTVGISG 821
Query: 465 LLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDK 524
LLITL+TT+ SP+T IQLIWV +M +LGGLMM ME +E + P R + ++ K
Sbjct: 822 LLITLITTIFTGNSPLTEIQLIWVNALMCLLGGLMMVMELSSEEELVKQPYDRNQLIITK 881
Query: 525 VMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKK 584
+WK+ QVL Q +I +F G V + +RK M FN+F LCQ+FN + M LK
Sbjct: 882 KIWKNIVFQVLYQASACIILEFGGHVT-DREKQVRKTMIFNTFFLCQLFNLLNTMGFLKA 940
Query: 585 AVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCA 644
V + ++K F V +QV+V+E+A LA RLN W IC ++ W
Sbjct: 941 EVFKIDVQKHCFSVALGSCFVMQVVVIEYAKGLAYCMRLNATRWAICVMVGAFSW----- 995
Query: 645 VNFIAGSFLDWSLSGILRLEFSRRQQHRPYVSFLSIPFSMFLY 687
L+W L+ IL + FS P S P +F +
Sbjct: 996 -------VLEWILNKILSVFFSNTDT-SPLDPPESTPQPLFYF 1030
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357468545|ref|XP_003604557.1| Plasma membrane calcium-transporting ATPase [Medicago truncatula] gi|355505612|gb|AES86754.1| Plasma membrane calcium-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 246/651 (37%), Positives = 374/651 (57%), Gaps = 35/651 (5%)
Query: 1 MENLSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGNVSVGTVVKLFERFLLKPQGKIS 60
++ SL + L+AFV I + K GD + LP++K VSVG +++L E LL+P+G+IS
Sbjct: 306 LDKASLFIFTLVAFVVFIHQICEK-DGDGDGLPDMK--VSVGLLMELLENILLRPRGRIS 362
Query: 61 ILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVT 120
IL T + VQHGMP ++T SL + ++ + A +LSA TMG+ +VIC+DV+
Sbjct: 363 ILACVFTAAILFVQHGMPRMVTFSLHYHINDVVPDEEAVFNDLSACTTMGLVTVICVDVS 422
Query: 121 GGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVS 180
G L+ ++VS+ +GE + VL L+ G+ S++ PE+S+ P + LVS
Sbjct: 423 GRLISKPMEVSEIWMGEGETEICEVEGSETVVLDKLKEGVVLSIISPELSLSPRSSALVS 482
Query: 181 WAKSRSLNVDQN-----LSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTIL 235
WA+++ +D N I ++ KL+S GVL+K G E +++H++WSG+ASTIL
Sbjct: 483 WAETKC-EMDTNSFIERFDIFKHNKLNSDKGGSGVLVKEVLGTE-QVLHLHWSGSASTIL 540
Query: 236 NMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLAL 295
CS YYD +G+ ME SGL+PIAFA +T + ++++ L LLAL
Sbjct: 541 ETCSRYYDGQGECH---------------MEGSGLKPIAFAYRKTYLQVLEQDDLTLLAL 585
Query: 296 AGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQF 351
G RE IKS ++ ++N G++I L+SED++ V E+A ELG P LEG++F
Sbjct: 586 IGFKEKSRESIKSALQGVQNTGIKIKLISEDDIDLVEEIAYELGIEVPVGGH--LEGKEF 643
Query: 352 RELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGS--STRDTPALKEAD 409
++L+ R ++D MGS A DKL +V ++KG VVAF + + LK AD
Sbjct: 644 KDLHEGARFDEVDKAIAMGSFCAEDKLCMVNYLQDKGDVVAFIDQRLITRHASEVLKVAD 703
Query: 410 VGITEENKC-TEMARECSDIVISTVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLIT 468
VGI N +M + I ++ +L PI+K GR Y NIQKF +LQLT SGLLIT
Sbjct: 704 VGIVSLNSLRKKMDKGSCGITMTCFSALEPIVKAGRRKYHNIQKFIQLQLTVSISGLLIT 763
Query: 469 LVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWK 528
L+TT+ SP+T+IQ+IW+ +M +LGGLMM ME +E + P R + ++ + K
Sbjct: 764 LITTIFTGNSPLTAIQMIWINVLMCLLGGLMMVMELSREEELAKQPCDRNQPIITMKILK 823
Query: 529 HAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQP 588
+ QVL Q + +I QF G + + +RK M FN+F CQ+FN + + LLKK
Sbjct: 824 NIVYQVLYQAFLCMILQFGGHITHS-EKQVRKTMIFNTFLFCQLFNLLNNVYLLKKQGLK 882
Query: 589 VVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPW 639
++++ + F V + +QVLV+++A LA LN W IC +++ L W
Sbjct: 883 MIVQNLIFSVALGSCVVMQVLVIQYAKGLADCVPLNTAGWTICVLVSALSW 933
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451324|ref|XP_002273945.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/669 (35%), Positives = 372/669 (55%), Gaps = 48/669 (7%)
Query: 4 LSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGN-VSVGTVVKLFERFLLKPQGKISIL 62
L LAV +++ V +IR + ++ D+N + E G+ ++ V+ + I+
Sbjct: 381 LGLAVALIVLVVLIIRY-FTGNTEDENGMQEFNGSKTNINDVM----------DAVVHII 429
Query: 63 VSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGG 122
+A+T+V +A+ G+P +T+SL + ++++ + A + LSA TMG A+ IC D TG
Sbjct: 430 SAAVTIVVVAIPEGLPLAVTLSLAYSMKRMMADQ-AMVRKLSACETMGSATTICTDKTGT 488
Query: 123 LLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG----------ASVLVPEISVW 172
L N++ V +F +G + + +D EI +VLQ L++G+G S VPEIS
Sbjct: 489 LTLNKMKVVEFWLGNEVIEDDTYLEIAPSVLQLLKQGVGLNTTGSVCKLPSTSVPEISGS 548
Query: 173 PTTDWLVSWAK-SRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWS 228
PT +++WA +++D Q+ I+ +S K GVL++ D+ + +W
Sbjct: 549 PTETAILTWAVVDLGMDIDEQKQSCEILHVEAFNSEKKRSGVLVRTI---TDQTIQTHWK 605
Query: 229 GTASTILNMCSYYYDSEGKSFEIKGEKR-RFQKLIKDMEDSGLRPIAFAC-------GQT 280
G A IL CS+Y+D GK+ + +KR +F +I+DM LR IAFA GQ+
Sbjct: 606 GAAEMILATCSHYFDKGGKTKLMDDDKRMQFGGIIRDMAAKSLRCIAFAYKQVLQENGQS 665
Query: 281 EVSEIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGN 336
+++E G+ LL L GL++ ++ VE R+AGV+I +++ D + +A E G
Sbjct: 666 H-EKLEETGMTLLGLVGLKDPCRPGVRRAVEDCRDAGVKIKMITGDNIFTAKAIAMECGI 724
Query: 337 FRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFF 394
+P+ N+ +EG FR + ERM K+D + +M DKLL+VQ+ K+KGHVVA
Sbjct: 725 LKPDEDMNNAVVEGVTFRNFSDEERMEKIDMIRVMARSSPFDKLLMVQSLKQKGHVVAV- 783
Query: 395 GGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQK 452
G T D PALKEAD+G++ + TE+A+E SDIVI S++ +L+ GRC Y NIQK
Sbjct: 784 TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLRWGRCVYNNIQK 843
Query: 453 FTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTN 512
F + QLT + L+I V + + P+T++QL+WV IM LG L + E + +
Sbjct: 844 FIQFQLTVNVAALVINFVAAVSSGDVPLTAVQLLWVNLIMDTLGALALATERPTNDLLKK 903
Query: 513 PPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQV 572
P RTK L+ VMW++ Q L QV VLLI QF G+ I ++ ++ + FN+F LCQV
Sbjct: 904 SPVGRTKPLISNVMWRNLIAQALYQVAVLLILQFKGKDIFNVDEKVKNTLIFNTFVLCQV 963
Query: 573 FNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICF 632
FN+F+A + KK V +LK FL + I +QV++VEF A RLN WG C
Sbjct: 964 FNEFNARHMEKKNVFKGILKNRLFLGIIGFTIVLQVVMVEFLKRFADTVRLNWGQWGACI 1023
Query: 633 ILAVLPWGI 641
+A L W I
Sbjct: 1024 AIASLSWPI 1032
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449511812|ref|XP_004164060.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 242/649 (37%), Positives = 371/649 (57%), Gaps = 30/649 (4%)
Query: 23 RKHSGDDNELPELKGNVSVGTVVKLFERF-LLKPQGKISILVSALTVVAIAVQHGMPFVI 81
+H N+ PE KG ++V + F+R + + ++S + + + + + +QHGMP I
Sbjct: 159 HEHGNYYNDKPETKGKLTVAFIGNAFQRMSFVFGKYRVSSVATVVFTMVVGIQHGMPLAI 218
Query: 82 TVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVN 141
T SL FW+EK+ +H QNLSA T+G+ SVICIDV L V+V +F +GE+ +N
Sbjct: 219 TFSLSFWREKMRRSHKVNCQNLSACGTLGLVSVICIDVAAELSFCDVEVDEFYVGEEKIN 278
Query: 142 NDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSL------NVDQNLSI 195
+ E + V Q E + P+ + +++L+ + K+ L ++DQ I
Sbjct: 279 PGM--EFHLDVHQGFEAASRVLRIDPKTTFL--SEYLLDFWKNSGLKINNEPDLDQMFDI 334
Query: 196 VQYRKLSSHNKVCGVLMKINGGDE-DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGE 254
+ ++ LSS + ++ K GGD ++H ++ G ASTILNMCS YYD G+ +I+
Sbjct: 335 IDHKFLSSEEGIGVLVNKTRGGDTVSNLIHEHFYGDASTILNMCSNYYDIGGRVHDIENR 394
Query: 255 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLR---EEIKSTVEALRN 311
Q IK+ME+ GLRPIAFAC Q E L LL GL+ E+I+ ++ L+N
Sbjct: 395 NDVLQTKIKEMEEKGLRPIAFACKQKNDQTGFEGELKLLGYMGLKISHEKIQHALKDLQN 454
Query: 312 AGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQ-FREL----NSTERMAKLDSM 366
G+RIIL S+D + + ++A +LG R + N+ EG+Q RE+ N E+ + S+
Sbjct: 455 IGIRIILTSKDNVSVIIKMAGDLGT-RCDPNNRQTEGDQRLREILMKNNEREKNELMKSI 513
Query: 367 TLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECS 426
T MG + DKL+LV+ K KG VAF GG ++ D P L EAD+GI +EN+ T+ + S
Sbjct: 514 TFMGKATSDDKLVLVKELKAKGETVAFIGGLTSGDVPTLIEADIGIIQENRSTKECKLVS 573
Query: 427 DIVISTVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLI 486
D+ V SL LK GR Y NI+KF +LQLT SGLLITL+ T++ +SPITS L
Sbjct: 574 DLRYEDVTSLNHTLKYGRSNYLNIKKFYQLQLTALISGLLITLICTMVSGKSPITSFHLT 633
Query: 487 WVYCIMYILGGLMMRMEFKDQEPVTN--PPARRTKSLLDKVMWKHAAVQVLCQVVVLLIF 544
WV I +LGGLMM ME D+E V N + R ++L+ + + K + VLCQ V LI
Sbjct: 634 WVTLITCLLGGLMMVMELNDEE-VQNVVGGSDRNQALITRDIVKKIVIHVLCQASVFLII 692
Query: 545 QFAG-QVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCL----LKKAVQPVVLKKINFLVV 599
++ G +++P M D+R M FN++ LCQ+ N A+ + + AV V ++ + L+
Sbjct: 693 EYLGHKIVPQMKEDVRDTMIFNTYILCQIANVLGAITVGLVTNRAAVFQVAVQILWVLIF 752
Query: 600 FVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAV-LPWGIHCAVNF 647
V V+AVQV+V+E ++ +L+ + W ICF+ A+ L W + ++F
Sbjct: 753 VVGVLAVQVVVIELHGTIVNGVKLSALQWIICFLFALALGWASYIFLHF 801
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449453746|ref|XP_004144617.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 242/649 (37%), Positives = 371/649 (57%), Gaps = 30/649 (4%)
Query: 23 RKHSGDDNELPELKGNVSVGTVVKLFERF-LLKPQGKISILVSALTVVAIAVQHGMPFVI 81
+H N+ PE KG ++V + F+R + + ++S + + + + + +QHGMP I
Sbjct: 378 HEHGNYYNDKPETKGKLTVAFIGNAFQRMSFVFGKYRVSSVATVVFTMVVGIQHGMPLAI 437
Query: 82 TVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVN 141
T SL FW+EK+ +H QNLSA T+G+ SVICIDV L V+V +F +GE+ +N
Sbjct: 438 TFSLSFWREKMRRSHKVNCQNLSACGTLGLVSVICIDVAAELSFCDVEVDEFYVGEEKIN 497
Query: 142 NDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSL------NVDQNLSI 195
+ E + V Q E + P+ + +++L+ + K+ L ++DQ I
Sbjct: 498 PGM--EFHLDVHQGFEAASRVLRIDPKTTFL--SEYLLDFWKNSGLKINNEPDLDQMFDI 553
Query: 196 VQYRKLSSHNKVCGVLMKINGGDE-DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGE 254
+ ++ LSS + ++ K GGD ++H ++ G ASTILNMCS YYD G+ +I+
Sbjct: 554 IDHKFLSSEESMGVLVNKTRGGDTVSNLIHEHFYGDASTILNMCSNYYDIGGRVHDIENR 613
Query: 255 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLR---EEIKSTVEALRN 311
Q IK+ME+ GLRPIAFAC Q E L LL GL+ E+I+ ++ L+N
Sbjct: 614 NDVLQTKIKEMEEKGLRPIAFACKQKNDQTGFEGELKLLGYMGLKISHEKIQHALKDLQN 673
Query: 312 AGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQ-FREL----NSTERMAKLDSM 366
G+RIIL S+D + + ++A +LG R + N+ EG+Q RE+ N E+ + S+
Sbjct: 674 IGIRIILTSKDNVSVIIKMAGDLGT-RCDPNNRQTEGDQRLREILMKNNEREKNELMKSI 732
Query: 367 TLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECS 426
T MG + DKL+LV+ K KG VAF GG ++ D P L EAD+GI +EN+ T+ + S
Sbjct: 733 TFMGKATSDDKLVLVKELKAKGETVAFIGGLTSGDVPTLIEADIGIIQENRSTKECKLVS 792
Query: 427 DIVISTVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLI 486
D+ V SL LK GR Y NI+KF +LQLT SGLLITL+ T++ +SPITS L
Sbjct: 793 DLRYEDVTSLNHTLKYGRSNYLNIKKFYQLQLTALISGLLITLICTMVSGKSPITSFHLT 852
Query: 487 WVYCIMYILGGLMMRMEFKDQEPVTN--PPARRTKSLLDKVMWKHAAVQVLCQVVVLLIF 544
WV I +LGGLMM ME D+E V N + R ++L+ + + K + VLCQ V LI
Sbjct: 853 WVTLITCLLGGLMMVMELNDEE-VQNVVGGSDRNQALITRDIVKKIVIHVLCQASVFLII 911
Query: 545 QFAG-QVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCL----LKKAVQPVVLKKINFLVV 599
++ G +++P M D+R M FN++ LCQ+ N A+ + + AV V ++ + L+
Sbjct: 912 EYLGHKIVPQMKEDVRDTMIFNTYILCQIANLLGAISVGLVTNRAAVFQVAVQILWVLIF 971
Query: 600 FVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAV-LPWGIHCAVNF 647
V V+AVQV+V+E ++ +L+ + W ICF+ A+ L W + ++F
Sbjct: 972 VVGVLAVQVVVIELHGTIVNGVKLSALQWIICFLFALALGWASYIFLHF 1020
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437164|ref|XP_002274787.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/665 (35%), Positives = 359/665 (53%), Gaps = 55/665 (8%)
Query: 59 ISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICID 118
++I+ +A+T++ +A+ G+P +T++L + ++++ +H A + LSA TMG A++IC D
Sbjct: 422 VNIVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMADH-AMVRKLSACETMGSATIICTD 480
Query: 119 VTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG----------ASVLVPE 168
TG L N++ V+KF +G++++ ++ I +L+ +G+G AS V E
Sbjct: 481 KTGTLTMNQMKVTKFWLGQEEMGEIPSNAITPCILELFRQGVGLNTTGSVYRPASGAVFE 540
Query: 169 ISVWPTTDWLVSWAKSRSLNVD-----QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIM 223
S PT ++SWA + L +D Q SI+ +S K GV M+ N D +
Sbjct: 541 FSGSPTEKAILSWA-VQELGMDVEQLKQTYSILHVETFNSEKKRSGVSMRKNA---DNTI 596
Query: 224 HINWSGTASTILNMCSYYYDSEGKSFEIKGEKR-RFQKLIKDMEDSGLRPIAFACGQTEV 282
H++W G A +L MCS YY++ G + + R + +K+I+ M S LR IAFA Q
Sbjct: 597 HVHWKGAAEMVLQMCSNYYETSGTIKSMDEDSRMQLEKIIQGMAASSLRCIAFAYKQISE 656
Query: 283 SEIK------------ENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLA 326
+EI+ ENGL LL + GL++ +K VE ++AGV I +++ D +
Sbjct: 657 AEIEYNDDGRAHQKLNENGLTLLGIVGLKDPCRPGVKRAVEICKSAGVEIKMITGDNVFT 716
Query: 327 VTEVACE---LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383
+A E LG+ E +EG +FR ERM K+D + +M DKLL+VQ
Sbjct: 717 AKAIATECGILGSDDTEHKGAVVEGVEFRNYTHEERMQKIDKIRVMARSSPFDKLLMVQC 776
Query: 384 AKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILK 441
K+KG VVA G T D PALKEAD+G++ + TE+A+E SDIVI S+ +L+
Sbjct: 777 LKQKGEVVAV-TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVATVLR 835
Query: 442 LGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMR 501
GRC Y NIQKF + QLT + L+I ++ + E P+T++QL+WV IM LG L +
Sbjct: 836 WGRCVYNNIQKFIQFQLTVNVAALVINFISAVSAGEVPLTAVQLLWVNLIMDTLGALALA 895
Query: 502 MEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKA 561
+ E + PP RT+ L+ VMW++ Q L Q+ VLL QF G+ I ++ +
Sbjct: 896 TDRPTNELMQRPPVGRTEPLITNVMWRNLLAQALYQIAVLLTLQFKGESIFNVDEKVNDT 955
Query: 562 MTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQ 621
+ FN+F LCQVFN+F+A L K+ V + K FL + I +QV++VEF A
Sbjct: 956 LIFNTFVLCQVFNEFNARKLEKQNVFKGIHKNKLFLGIVGFTIVLQVVMVEFLKKFADTV 1015
Query: 622 RLNGMHWGICFILAVLPWGIHCAVNFIAG------SFLDWSLSGILRLEFSRRQQHRPYV 675
LNG+ W IC +A + W I V FI S++ W+ R+ H Y+
Sbjct: 1016 NLNGLQWAICIAIAAVSWPIGWIVKFIPVSDTPFLSYIKWAGQAFGRI------LHLSYL 1069
Query: 676 SFLSI 680
SF S+
Sbjct: 1070 SFSSL 1074
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359497232|ref|XP_003635458.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 228/633 (36%), Positives = 357/633 (56%), Gaps = 22/633 (3%)
Query: 28 DDNELPELKGNVSVGT-VVKLFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLF 86
D P +KG S ++ +R +L+P KISI ++L ++ + + G PF+IT+SL
Sbjct: 518 DSPGFPSMKGKPSTAKDLMDAVKRIVLQPTRKISIFTTSLHMLLVGITEGYPFIITLSLR 577
Query: 87 FWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVAS 146
+W +K L P+ L A ATMG + IC D GGL + + V IGE+D+N D S
Sbjct: 578 YWNKKTLSGKAFAPE-LLARATMGSVTTICTDKIGGLTLSPIQVKMCRIGEEDINGD--S 634
Query: 147 EINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAK----SRSLNVDQNLSIVQYRKLS 202
I+ V+ AL GI VL P+ + + ++SWA R + Q+ ++V+ ++L+
Sbjct: 635 VIDPDVVDALCDGIYTPVLDPKNAYSSEEEGVLSWAALKLGMRQEILKQSCTLVETKELN 694
Query: 203 SHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKR-RFQKL 261
S+ + VLM+ N +E + ++W G A+TIL CS+YYDS+G+ ++ EKR F+K
Sbjct: 695 SNEERSLVLMRKNRENE-TVTCLHWKGPATTILARCSFYYDSKGRINDMGREKRMDFEKF 753
Query: 262 IKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLRE----EIKSTVEALRNAGVRII 317
I+ M+ L+ IAFA + S +EN L+ L GLR+ E K VEA RNAGV I
Sbjct: 754 IEQMQSKHLKTIAFAYKKINESS-EENSFILIGLLGLRDTDWTETKKAVEACRNAGVNIK 812
Query: 318 LVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377
+VS + + ++A + G F P N + L+G +F+ ERM ++D +++MG+ +DK
Sbjct: 813 MVSSGNISELLDIAIQCGMFDP--NSLVLDGNEFQNYTDKERMDRVDRISIMGNARPSDK 870
Query: 378 LLLVQTAKEKGHVVAFFGGSSTRD-TPALKEADVGITEENKCTEMARECSDIVI--STVG 434
LLV+ K+KGH VA G + RD PA+K +DVG+T T+MA+ SDIVI
Sbjct: 871 SLLVECLKQKGHTVAVIG--ARRDEAPAIKHSDVGVTMGTWSTKMAKGNSDIVILDGNFS 928
Query: 435 SLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYI 494
L I++ GRCAY N+QK+ + +LT + LLIT ++T +L ++P+T+IQL + I+ I
Sbjct: 929 VLETIMRHGRCAYENVQKYIQHELTMVIAALLITSISTGLLGDAPVTAIQLAFGSVIVGI 988
Query: 495 LGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGM 554
GGL + E ++ + P + L+ MW++ Q QV +L+ QF G+ I G+
Sbjct: 989 PGGLALLTEPPAEKLIGKQPVGQGGKLITWAMWRNIITQASYQVAILVTIQFKGKAILGI 1048
Query: 555 NRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFA 614
+ K++ FNSF +CQVFN F+ L KK + + K + F V V+++ +Q +E
Sbjct: 1049 RPKVNKSLVFNSFVICQVFNLFNCRKLEKKNMFQGIKKNLWFWVAVVVIMGLQAAFIEIE 1108
Query: 615 TSLAGYQRLNGMHWGICFILAVLPWGIHCAVNF 647
+ G RLN WG C ++ ++ W I C F
Sbjct: 1109 HWVGGSARLNCAQWGTCLLIGMVSWVIDCIGKF 1141
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359496865|ref|XP_002270899.2| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 233/635 (36%), Positives = 362/635 (57%), Gaps = 25/635 (3%)
Query: 28 DDNE-LPELKGNVSVGT-VVKLFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSL 85
DDN P +KG S ++ +R +++P KISI ++L ++ + + G PFVIT+SL
Sbjct: 444 DDNPGFPPMKGKPSTAKDLMDAVKRIVVQPTRKISIFTTSLNMLLVGITEGYPFVITLSL 503
Query: 86 FFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVA 145
+W +K L P+ L A ATMG + IC + GGL + V V IGE+D+N+D
Sbjct: 504 RYWNKKTLSGKAFAPE-LLACATMGSVTTICTEKIGGLTLSPVQVKMCRIGEEDINDD-- 560
Query: 146 SEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAK----SRSLNVDQNLSIVQYRKL 201
S I+ V+ AL GI VL P+ + + ++SWA + + Q+ ++V+ ++L
Sbjct: 561 SVIDPDVVDALCDGIYTPVLDPKNAYSSEEEGVLSWAALKLGMKQEILKQSCTLVETKEL 620
Query: 202 SSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKR-RFQK 260
+S+ + VLM+ N +E + ++W G A+TIL CS+YYDS+G+ +++ EKR F+K
Sbjct: 621 NSNEERSLVLMRKNRENE-TVTCLHWKGPATTILARCSFYYDSKGRINDMEREKRMDFEK 679
Query: 261 LIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLRE-----EIKSTVEALRNAGVR 315
I+ M+ L+ IAFA +++E E +L + E K +VEA RNAGV
Sbjct: 680 FIEQMQSIHLKTIAFA--YKKINESSEENNLILIGLLGLKDTDWTETKESVEACRNAGVN 737
Query: 316 IILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375
I +VS D + + +AC G P N + L+G FR ERM K+D +++MG+ L +
Sbjct: 738 IKIVSRDNIPVLKAIACRCGIVGP--NSLVLDGNAFRNYTKEERMDKVDQISIMGNSLPS 795
Query: 376 DKLLLVQTAKEKGHVVAFFGGSSTRD-TPALKEADVGITEENKCTEMARECSDIVI--ST 432
DKLLLV+ K+KGH VA G + RD TPA+K++DVG+T T+MA+ SDIVI
Sbjct: 796 DKLLLVECLKQKGHTVAVIG--ARRDETPAIKQSDVGVTMGTWSTKMAKGTSDIVILDGN 853
Query: 433 VGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIM 492
L I++ GRCAY N+QK+ + +LT +GLLIT +TT +L ++P+T+IQL + I+
Sbjct: 854 FSFLETIMRHGRCAYENVQKYIQHELTMVIAGLLITSITTGLLGDAPVTAIQLAFGSVIV 913
Query: 493 YILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIP 552
I GGL + E ++ + P + L+ MW++ Q QV +L+ QF G+ I
Sbjct: 914 GIPGGLALLTEPPAEKLIHKQPIGQGGKLITWAMWRNIITQASYQVAMLVTIQFKGKAIL 973
Query: 553 GMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVE 612
G++ + K++ FNSF LCQVFN F+ L KK + + K + F V V+++ +Q +E
Sbjct: 974 GISPKVNKSLVFNSFVLCQVFNLFNCRKLEKKNMFQGIKKNLWFWVAVVVIMGLQAAFIE 1033
Query: 613 FATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNF 647
+ G RLN WG C ++ ++ W I C F
Sbjct: 1034 IEHWVGGSARLNCAQWGTCLLIGMVSWVIDCIGKF 1068
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 703 | ||||||
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.675 | 0.459 | 0.354 | 2.6e-69 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.669 | 0.463 | 0.338 | 4e-65 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.516 | 0.337 | 0.310 | 1e-64 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.416 | 0.269 | 0.332 | 1.1e-62 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.503 | 0.331 | 0.301 | 7.7e-58 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.718 | 0.490 | 0.247 | 5.8e-46 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.645 | 0.421 | 0.277 | 4.4e-43 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.815 | 0.559 | 0.247 | 1.3e-39 | |
| DICTYBASE|DDB_G0277861 | 1115 | patA "Ca2+-ATPase" [Dictyostel | 0.557 | 0.351 | 0.296 | 2.7e-37 | |
| CGD|CAL0000810 | 1211 | PMC1 [Candida albicans (taxid: | 0.419 | 0.243 | 0.316 | 5.2e-33 |
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 688 (247.2 bits), Expect = 2.6e-69, Sum P(2) = 2.6e-69
Identities = 177/500 (35%), Positives = 251/500 (50%)
Query: 167 PEISVWPTTDWLVSWAKSRSLNVD-----QNLSIVQYRKLSSHNKVCGVLMKINGGDEDK 221
PE S PT L+SW +L +D Q +++ SS K GVL++ D
Sbjct: 512 PEFSGSPTEKALLSWTVL-NLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRRKS---DN 567
Query: 222 IMHINWSGTASTILNMCSYYYDSEGKSFEIKGE--KRRFQKLIKDMEDSGLRPIAFACG- 278
+H++W G A +L MCS+YY S G S ++ K R Q +I+ M S LR IAFA
Sbjct: 568 TVHVHWKGAAEMVLAMCSHYYTSTG-SVDLMDSTAKSRIQAIIQGMAASSLRCIAFAHKI 626
Query: 279 QTEVSEIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACEL 334
+ S ++E+GL L+ + GL++ + VE + AGV I +++ D + +A E
Sbjct: 627 ASNDSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFEC 686
Query: 335 G----NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHV 390
G N + E D +EG QFR ERM K+D + +M +DKLL+V+ + KGHV
Sbjct: 687 GILDHNDKDEE-DAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHV 745
Query: 391 VAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYC 448
VA G T D PALKEAD+G++ + TE+A+E SDIVI S+ +LK GRC Y
Sbjct: 746 VAVTG-DGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYN 804
Query: 449 NIQKFTKLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYCIMYILGGLMMRMEFKDQE 508
NIQKF + QLT + E P+T++QL+WV IM LG L + E E
Sbjct: 805 NIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNE 864
Query: 509 PVTNPPARRTKSLLDKVMWKHAAXXXXXXXXXXXIFQFAGQVIPGMNRDIRKAMTFNSFT 568
+ P RT++L+ VMW++ I QF G I + ++++ + FN+F
Sbjct: 865 LLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKDTLIFNTFV 924
Query: 569 LCQVFNQFDAMCLLKKAVQPVVLKKINXXXXXXXXXXXXXXXXEFATSLAGYQRLNGMHW 628
LCQVFN+F+A + KK V + + EF A RLNG W
Sbjct: 925 LCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQW 984
Query: 629 GICFILAVLPWGIHCAVNFI 648
G C LA L W I FI
Sbjct: 985 GTCIALASLSWPIGFFTKFI 1004
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 668 (240.2 bits), Expect = 4.0e-65, P = 4.0e-65
Identities = 166/491 (33%), Positives = 247/491 (50%)
Query: 168 EISVWPTTDWLVSWA-KSRSLNVDQNLS---IVQYRKLSSHNKVCGVLMKING-GDEDKI 222
E S PT ++SWA + + +++ + +V +S K GVLMK G E+ +
Sbjct: 506 EFSGSPTEKAILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNV 565
Query: 223 MHINWSGTASTILNMCSYYYDSEGKSFEIK-GEKRRFQKLIKDMEDSGLRPIAFACGQT- 280
+H W G A IL MCS + D G E+K +K +F+K+I+ M LR IAFA +
Sbjct: 566 VH--WKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSEDN 623
Query: 281 -EVSEIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELG 335
+ ++KE L LL + G+++ +K VE + AGV I +++ D + +A E G
Sbjct: 624 EDNKKLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECG 683
Query: 336 NFRPE---SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVA 392
PE +++ LEGE+FR ER+ K++ + +M DKLL+V+ KE GHVVA
Sbjct: 684 ILTPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVA 743
Query: 393 FFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNI 450
G T D PALKEAD+G++ + TE+A+E SDIVI S+ +LK GRC Y NI
Sbjct: 744 VTG-DGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNI 802
Query: 451 QKFTKLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPV 510
QKF + QLT + + P+T++QL+WV IM LG L + E + +
Sbjct: 803 QKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLM 862
Query: 511 TNPPARRTKSLLDKVMWKHAAXXXXXXXXXXXIFQFAGQVIPGMNRDIRKAMTFNSFTLC 570
P R L+ +MW++ + QF G+ I + ++ + FN+F LC
Sbjct: 863 KKKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKNTLIFNTFVLC 922
Query: 571 QVFNQFDAMCLLKKAVQPVVLKKINXXXXXXXXXXXXXXXXEFATSLAGYQRLNGMHWGI 630
QVFN+F+A L KK V + K EF A +RLN WG+
Sbjct: 923 QVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGV 982
Query: 631 CFILAVLPWGI 641
C +A W I
Sbjct: 983 CIAIAAASWPI 993
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 464 (168.4 bits), Expect = 1.0e-64, Sum P(2) = 1.0e-64
Identities = 118/380 (31%), Positives = 181/380 (47%)
Query: 285 IKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE 340
+ E+ L LLA+ G+++ +K +V +NAGV++ +V+ D + +A E G +
Sbjct: 667 LPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSD 726
Query: 341 ---SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGS 397
S +EG+ FRE+ ER D +++MG DKLLLVQ+ + +GHVVA G
Sbjct: 727 ADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVAVTG-D 785
Query: 398 STRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTK 455
T D PAL EAD+G+ TE+A+E SDI+I S++ +++ GR Y NIQKF +
Sbjct: 786 GTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ 845
Query: 456 LQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPA 515
QLT + + P+T++QL+WV IM LG L + E + PP
Sbjct: 846 FQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPV 905
Query: 516 RRTKSLLDKVMWKHAAXXXXXXXXXXXIFQFAGQVIPGMNRDIRKAMT-------FNSFT 568
R + L+ +MW++ F G I G+ ++ + T FN+F
Sbjct: 906 GRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFV 965
Query: 569 LCQVFNQFDAMCLLKKAVQPVVLKKINXXXXXXXXXXXXXXXXEFATSLAGYQRLNGMHW 628
LCQ FN+F+A +K + V+K EF A +LN W
Sbjct: 966 LCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQW 1025
Query: 629 GICFILAVLPWGIHCAVNFI 648
IC + V+ W + FI
Sbjct: 1026 LICVGIGVISWPLALVGKFI 1045
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 425 (154.7 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 103/310 (33%), Positives = 162/310 (52%)
Query: 285 IKENGLHLLALAGLREEIKSTV-EALR---NAGVRIILVSEDELLAVTEVACELGNFRPE 340
+ E+ L LLA+ G+++ + V EA+R +AGV++ +V+ D L +A E G +
Sbjct: 684 LPEDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSD 743
Query: 341 SNDIA---LEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGS 397
+ + +EG+ FREL+ ER +T+MG DKLLLVQ ++ G VVA G
Sbjct: 744 TEAVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKNGDVVAVTG-D 802
Query: 398 STRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTK 455
T D PAL EAD+G++ TE+A+E SDI+I S++ +++ GR Y NIQKF +
Sbjct: 803 GTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ 862
Query: 456 LQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPA 515
QLT + + P+ ++QL+WV IM LG L + E + P
Sbjct: 863 FQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPV 922
Query: 516 RRTKSLLDKVMWKHAAXXXXXXXXXXXIFQFAGQVIPGMNRD-------IRKAMTFNSFT 568
R + L+ +MW++ + FAG I G+N + ++ M FN+F
Sbjct: 923 GRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFV 982
Query: 569 LCQVFNQFDA 578
+CQ+FN+F+A
Sbjct: 983 MCQIFNEFNA 992
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 424 (154.3 bits), Expect = 7.7e-58, Sum P(2) = 7.7e-58
Identities = 112/371 (30%), Positives = 179/371 (48%)
Query: 284 EIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339
E+ E+ L LLA+ G+++ +K++V + AGV++ +V+ D + +A E G
Sbjct: 670 ELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILAS 729
Query: 340 ESNDIA---LEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGG 396
+S+ +EG+ FR + ER + +++MG DKLLLVQ+ K +GHVVA G
Sbjct: 730 DSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRRGHVVAVTG- 788
Query: 397 SSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFT 454
T D PAL EAD+G+ + TE+A+E SDI+I S++ +++ GR Y NIQKF
Sbjct: 789 DGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFI 848
Query: 455 KLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPP 514
+ QLT + E P+T++QL+WV IM LG L + E + P
Sbjct: 849 QFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAP 908
Query: 515 ARRTKSLLDKVMWKHAAXXXXXXXXXXXIFQFAGQVI------PGMNRDIRKAMTFNSFT 568
R + L+ +MW++ I F G I P R ++ + FN+F
Sbjct: 909 VGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAER-VKNTVIFNAFV 967
Query: 569 LCQVFNQFDAMCLLKKAVQPVVLKKINXXXXXXXXXXXXXXXXEFATSLAGYQRLNGMHW 628
+CQVFN+F+A + + VL+ EF + A +L+ W
Sbjct: 968 ICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLDWEMW 1027
Query: 629 GICFILAVLPW 639
+C + + W
Sbjct: 1028 LVCIGIGSISW 1038
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 5.8e-46, Sum P(2) = 5.8e-46
Identities = 133/537 (24%), Positives = 236/537 (43%)
Query: 124 LCNRVDVSKFCIGEKD-VNNDVASEINQAVLQALERGIGASVLVP-----EISVWPTTDW 177
+C++V + G K+ +++ E+ +LQ + + G+ V+ +I PT
Sbjct: 468 ICDKVQERQE--GSKESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERA 525
Query: 178 LVSWAK--SRSLNVDQNL-SIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTI 234
++ + N + I++ +S K VL+ + GG G + +
Sbjct: 526 ILEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFC----KGASEIV 581
Query: 235 LNMCSYYYDSEGKSFEIKGEK-RRFQKLIKDMEDSGLRPIAFA---CGQTEVSEIKENGL 290
L MC DS G+S + E+ +I+ LR + + E+ + G
Sbjct: 582 LKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGELPDGGY 641
Query: 291 HLLALAGLREEIKSTV-EALRN---AGVRIILVSEDELLAVTEVACELGNFRPESNDIAL 346
++A+ G+++ ++ V EA++ AG+ + +V+ D + +A E G + +A+
Sbjct: 642 TMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYT--EGGLAI 699
Query: 347 EGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALK 406
EG +FR+L+ E A + + +M L DK LV ++ G VVA G T D PAL
Sbjct: 700 EGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAVTG-DGTNDAPALH 758
Query: 407 EADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKLQLTGCASG 464
EAD+G+ TE+A+E +D++I +++ + + GR Y NIQKF + QLT
Sbjct: 759 EADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVA 818
Query: 465 XXXXXXXXXXXEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDK 524
+P+T++QL+WV IM LG L + E ++ + P RT S + K
Sbjct: 819 LIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITK 878
Query: 525 VMWKHAAXXXXXXXXXXXIFQFAGQVIPGMNRD----IRKAMTFNSFTLCQVFNQFDAMC 580
MW++ A I FAG+ + ++ + + FNSF CQVFN+ ++
Sbjct: 879 TMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVFNEINSRE 938
Query: 581 LLKKAVQPVVLKKINXXXXXXXXXXXXXXXXEFATSLAGYQRLNGMHWGICFILAVL 637
+ K V + EF + A L+ HW + ++ L
Sbjct: 939 IEKINVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSL 995
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 389 (142.0 bits), Expect = 4.4e-43, Sum P(2) = 4.4e-43
Identities = 136/490 (27%), Positives = 206/490 (42%)
Query: 180 SWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCS 239
S+ R N D+ +V+ SS K+ VLM N ++ I G A +LN C+
Sbjct: 497 SYETVRKENKDR---VVKVYPFSSEKKMSAVLMNQNQNISGGLI-IYVKGAAEIVLNNCT 552
Query: 240 YYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQ--TEVSEIKE-----NGLH 291
D G+S ++ + EK QK I+ GLR + A + E S E GL
Sbjct: 553 NIVDKNGESTQMSRDEKMLLQKDIEIFASEGLRTLVLAYKEINNEPSSEDEAKVIYTGLT 612
Query: 292 LLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALE 347
L L G+ R+E+ V+ + AG+ + +++ D +L +A E G + +A+E
Sbjct: 613 FLGLVGIKDPVRKEVPRAVKRCQGAGIFVRMLTGDNILTAKNIARECGILK--DGGVAIE 670
Query: 348 GEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKE 407
G QFR L + + + ++ C DK LV +E G VVA G D P LKE
Sbjct: 671 GPQFRLLTDDQLDTIIPHLQVIARCSPTDKFRLVHRLRELGEVVAVTG-DGVNDAPQLKE 729
Query: 408 ADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGX 465
ADVG + TE+A+E SDIV+ S+ + GR Y +I+KF + QLT
Sbjct: 730 ADVGFSMGIAGTEVAKEASDIVLLDDNFNSIAKAVIWGRNVYDSIRKFIQFQLTVNIVAV 789
Query: 466 XXXXXXXXXXEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKV 525
ESP+ +QL+WV IM LG L + E +E P R SL+
Sbjct: 790 LIAFVGSITNGESPLRPVQLLWVNLIMDTLGALALSTEPPSEELFNRRPYGRFDSLITYR 849
Query: 526 MWKH--AAXXXXXXXXXXXIFQFAGQV----IPGMN------RDIRKAMTFNSFTLCQVF 573
MW++ ++ A V +P ++ + + + FN+F CQ F
Sbjct: 850 MWRNIIGQSIYQIAFLFSIMYSAASMVELFDLPRVDQWTTNDKTVYHTIIFNTFVFCQFF 909
Query: 574 NQFDAMCLLKKA-VQPVVLKKINXXXXXXXXXXXXXXXXEFATSLAGYQRLNGMHWGICF 632
N+ + L + V + K EF G + L+ W C
Sbjct: 910 NEINCRVLDNQLNVFRNIHKSYVFVGVVSFCIFIQVILVEFGGEFFGTRHLDYKQWFFCI 969
Query: 633 ILAV--LPWG 640
I+ L WG
Sbjct: 970 IIGFGSLIWG 979
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 454 (164.9 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 152/615 (24%), Positives = 271/615 (44%)
Query: 59 ISILVSALTV-VAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICI 117
++I+V A+ + +AV + F + + ++ L+ H A + + + + +
Sbjct: 400 VTIIVVAVPEGLPLAVTLSLAFAMKQLM---SDRALVRHLAACETMGSSTCICTDKTGTL 456
Query: 118 DVTGGLLCNRVDVSKFCIGEKDVNN---DVASEINQAVLQALERGIGASVLVP-----EI 169
T ++ N+V + + I E+ N +++ ++ ++QA+ + G+ V+ +I
Sbjct: 457 -TTNHMVVNKVWICEN-IKERQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQI 514
Query: 170 SVWPTTDWLVSWAKSRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHIN 226
PT ++ + +VD + I++ +S K VL +GG K+
Sbjct: 515 LGSPTERAILEFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGG---KVRAF- 570
Query: 227 WSGTASTILNMCSYYYDSEGKSFEIKGEK-RRFQKLIKDMEDSGLRPIAFACGQTEVS-- 283
G + +L MC DS G+S + EK +I+ LR + + +
Sbjct: 571 CKGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPR 630
Query: 284 -EIKENGLHLLALAGLREEIKSTV-EALRN---AGVRIILVSEDELLAVTEVACELGNFR 338
++ G L+A+ G+++ ++ V EA++ AG+ + +V+ D + +A E G
Sbjct: 631 GDLPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILT 690
Query: 339 PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSS 398
+ +A+EG FR L E A L + +M L DK LV ++ G VVA G
Sbjct: 691 --AGGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTG-DG 747
Query: 399 TRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKL 456
T D PAL EAD+G+ TE+A+E +D++I +++ + K GR Y NIQKF +
Sbjct: 748 TNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQF 807
Query: 457 QLTGCASGXXXXXXXXXXXEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPAR 516
QLT +P+T++QL+WV IM LG L + E ++ + P
Sbjct: 808 QLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIG 867
Query: 517 RTKSLLDKVMWKHAAXXXXXXXXXXXIFQFAGQVIPGMNRD----IRKAMTFNSFTLCQV 572
RT S + + MW++ I FAG+ I +N + + FNSF CQV
Sbjct: 868 RTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQV 927
Query: 573 FNQFDAMCLLKKAVQPVVLKKINXXXXXXXXXXXXXXXXEFATSLAGYQRLNGMHWGICF 632
FN+ ++ + K V + K EF + A L+ HW +C
Sbjct: 928 FNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCI 987
Query: 633 ILA----VLPWGIHC 643
++ +L G+ C
Sbjct: 988 LIGSVSMILAVGLKC 1002
|
|
| DICTYBASE|DDB_G0277861 patA "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 372 (136.0 bits), Expect = 2.7e-37, Sum P(2) = 2.7e-37
Identities = 126/425 (29%), Positives = 197/425 (46%)
Query: 59 ISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICID 118
+ +++SA+T+V +AV G+P +T++L + K+ ++ +NL++ TMG A+ IC D
Sbjct: 327 VQLVISAITIVVVAVPEGLPLAVTMALAYGMMKMFKENNLV-RNLASCETMGSATTICSD 385
Query: 119 VTGGLLCNRVDVSKFCI-GEKDVNNDVASEINQAVLQALERGIGASVLVPE-ISVWPTTD 176
TG L N + V I G + +A +I + V L G+ + E +S +
Sbjct: 386 KTGTLTQNVMSVVTGTICGVFPTLDGIAQKIPKHVQSILTDGMAINSNAYEGVSSKGKLE 445
Query: 177 WLVSWAKSRSLNV------DQN-----LSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHI 225
++ S + LN D N L +V+ SS K VL+K D+ + +
Sbjct: 446 FIGSKTECALLNFGKLFGCDYNEVRKRLEVVELYPFSSARKRMSVLVK-----HDQNLRL 500
Query: 226 NWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIA-----FACGQT 280
G + IL C Y D G I K F++ I + LR I F G+
Sbjct: 501 FTKGASEIILGQCGSYLDEAGNIRPISEAKAYFEEQINNFASDALRTIGLAYRDFQYGEC 560
Query: 281 EVSEIKENGLHLLALAG----LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGN 336
+ E EN L + + G LR E+ VE + AG+ + +V+ D L+ +A G
Sbjct: 561 DFKEPPENNLVFIGIVGIKDPLRPEVPEAVEICKRAGIVVRMVTGDNLVTAQNIARNCGI 620
Query: 337 FRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGG 396
+ +EG +FREL+ +E A L + ++ DK LLV K+ G VVA G
Sbjct: 621 LT--EGGLCMEGPKFRELSQSEMDAILPKLQVLARSSPTDKQLLVGRLKDLGEVVAVTG- 677
Query: 397 SSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFT 454
T D PALK A+VG + TE+A SD+V+ S++ + GR Y I KF
Sbjct: 678 DGTNDGPALKLANVGFSMGISGTEVAIAASDVVLLDDNFASIVRAVLWGRNIYDAICKFL 737
Query: 455 KLQLT 459
+ QLT
Sbjct: 738 QFQLT 742
|
|
| CGD|CAL0000810 PMC1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 322 (118.4 bits), Expect = 5.2e-33, Sum P(3) = 5.2e-33
Identities = 100/316 (31%), Positives = 153/316 (48%)
Query: 280 TEVSEIKENGLHLLALAGLREEIKSTV-EAL---RNAGVRIILVSEDELLAVTEVA--CE 333
+ SEI + + L AL G+++ +K V EA+ + AGV + +V+ D + ++ C
Sbjct: 753 SSASEIHKMFI-LDALVGIQDPLKKGVAEAVLQCKRAGVTVRMVTGDNINTAKSISKECN 811
Query: 334 LGNFRPESNDIA-LEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVA 392
+ SN+ + +EG QFR+L+ +R + + ++ DK +LV T ++ G VVA
Sbjct: 812 ILTSDDLSNEYSCMEGPQFRKLSIQKRREIVPQLKVLARSSPEDKRILVDTLRKAGEVVA 871
Query: 393 FFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIST--VGSLLPILKLGRCAYCNI 450
G T D PALK ADVG + TE+ARE SDI++ T ++ +K GR +I
Sbjct: 872 VTG-DGTNDAPALKLADVGFSMGIAGTEVAREASDIILMTDDFTDIVQAIKWGRTVSTSI 930
Query: 451 QKFTKLQLTGCASGXXXXXXXXXXXEE--SPITSIQLIWVYCIMYILGGLMMRMEFKDQE 508
+KF + QLT + E S +T++QL+WV IM L L + + D
Sbjct: 931 KKFIQFQLTVNITACVLTFVSAVASSENKSVLTAVQLLWVNLIMDTLAALALATDKPDDS 990
Query: 509 PVTNPPARRTKSLLDKVMWKHAAXXXXXXXXXXXIFQFAGQVI--PG---MNRDIRK--- 560
+ PA RT L+ MWK I FAG+ + PG +N K
Sbjct: 991 FLNRKPAGRTAPLISTSMWKMIIGQSMTQLIITFILHFAGKQLFFPGQSHINNHSEKQLA 1050
Query: 561 AMTFNSFTLCQVFNQF 576
AMTFN+F Q + F
Sbjct: 1051 AMTFNTFVWLQFWKLF 1066
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 703 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 3e-76 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 2e-52 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-33 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-24 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 1e-20 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-16 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-15 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 6e-15 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 9e-10 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-08 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 6e-08 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-07 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-06 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-04 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 9e-04 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 0.003 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 0.004 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 263 bits (673), Expect = 3e-76
Identities = 176/620 (28%), Positives = 281/620 (45%), Gaps = 46/620 (7%)
Query: 59 ISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICID 118
+ + A+T+V +AV G+P +T++L + +K++ + ++L+A TMG A+ IC D
Sbjct: 326 LDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM-KDNNLVRHLAACETMGSATAICSD 384
Query: 119 VTGGLLCNRVDVSKFCIGEKDVN-NDVASEINQAVLQALERGIG-ASVLVPEISVW---- 172
TG L N + V + IGE+ N DV + + V L GI S +
Sbjct: 385 KTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 444
Query: 173 ----PTTDWLVSWAKSRSL----NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMH 224
T L+ + L V +V+ +S K V++K +GG
Sbjct: 445 FIGSKTECALLDFGL-LLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGG----KYR 499
Query: 225 INWSGTASTILNMCSYYYDSEGKSFEIKGE-KRRFQKLIKDMEDSGLRPIA-----FACG 278
G + +L C DS G++ I + K R +I+ + LR I FA
Sbjct: 500 EFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPE 559
Query: 279 QTEVSEIKENGLHLLALAG----LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 334
+ + GL L+ + G LR ++ V+ + AG+ + +V+ D + +A
Sbjct: 560 EFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC 619
Query: 335 GNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFF 394
G +A+EG++FR L E L + ++ DK LLV K+ G VVA
Sbjct: 620 GILTF--GGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAV- 676
Query: 395 GGSSTRDTPALKEADVGITEENKCTEMARECSDIVIST--VGSLLPILKLGRCAYCNIQK 452
G T D PALK ADVG + TE+A+E SDI++ S++ +K GR Y NI+K
Sbjct: 677 TGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRK 736
Query: 453 FTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTN 512
F + QLT +++T V + I SP+T++QL+WV IM L L + E + +
Sbjct: 737 FLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDR 796
Query: 513 PPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAG---------QVIPGMNRDIRKAMT 563
P R L+ + MWK+ Q Q+VV I FAG I + +
Sbjct: 797 KPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIV 856
Query: 564 FNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRL 623
FN+F L Q+FN+ +A L ++ V + K F+ + QV++VEF S L
Sbjct: 857 FNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSL 916
Query: 624 NGMHWGICFILAV--LPWGI 641
+ W C +L + L +G+
Sbjct: 917 SIEQWIGCVLLGMLSLIFGV 936
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 194 bits (496), Expect = 2e-52
Identities = 141/624 (22%), Positives = 268/624 (42%), Gaps = 53/624 (8%)
Query: 56 QGKISILVSALTVVAIAVQ---HGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIA 112
+G +L S LT +A+AV G+P V+T++L +++ +A ++L+A T+G
Sbjct: 290 RGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRM-AKDNAIVRSLNAIETLGSV 348
Query: 113 SVICIDVTGGLLCNRVDVSK-FCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISV 171
VIC D TG L N++ V K + G +D + + A+L+ L + + PE +
Sbjct: 349 DVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNG 408
Query: 172 W-----PTTDWLVSWAKSRSLNVDQNLSIVQYRKL-----SSHNKVCGVLMKINGGDEDK 221
W PT LV +A+ ++D + V+Y L S K V++K + G
Sbjct: 409 WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYIL 468
Query: 222 IMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACG--- 278
+ G IL C + E + E R ++ +K++ GLR +A A
Sbjct: 469 FV----KGAPEVILERCKSIGELEPLTEE---GLRTLEEAVKELASEGLRVLAVAYKKLD 521
Query: 279 ---QTEVSEIKENGLHLLALAG----LREEIKSTVEALRNAGVRIILVSEDELLAVTEVA 331
+ + + E+ L L L G RE++K +E LR AG+++ +++ D + +A
Sbjct: 522 RAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA 581
Query: 332 CELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVV 391
E G + + ++G + L+ E ++ +++ K +V+ ++ GHVV
Sbjct: 582 KECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVV 641
Query: 392 AFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIST--VGSLLPILKLGRCAYCN 449
A G D PALK ADVGI + T+ A+E +DIV+ +++ + GR Y N
Sbjct: 642 AMT-GDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVN 700
Query: 450 IQKFTKLQLTGC-ASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQE 508
I+KF L+ L + + + L P+T +QL+W+ + L L + +E + +
Sbjct: 701 IKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESD 760
Query: 509 PVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMN-----------RD 557
+ PP + L + K +L ++ I ++ + +
Sbjct: 761 VMKRPPRGPEEGLFN---RKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQA 817
Query: 558 IRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSL 617
+ + F L Q+ + + ++ + +++I +Q+L++
Sbjct: 818 LLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLN 877
Query: 618 AGYQRLNGMH---WGICFILAVLP 638
+ + W I +A+L
Sbjct: 878 LKIFQPTPLSLFEWLIAIAVALLL 901
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 136 bits (343), Expect = 4e-33
Identities = 135/557 (24%), Positives = 238/557 (42%), Gaps = 58/557 (10%)
Query: 56 QGK-----ISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMG 110
QGK +I VS L V AI G+P ++TV+L ++ A + L + T+G
Sbjct: 267 QGKDWLEMFTISVS-LAVAAIP--EGLPIIVTVTLALGVLRM-SKKRAIVRKLPSVETLG 322
Query: 111 IASVICIDVTGGLLCNRVDVSK-FCIGE----------------KDVNNDVASEINQAVL 153
+VIC D TG L N + V+K + + + AV
Sbjct: 323 SVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVS 382
Query: 154 QALERG--IGASVLVPEISVW---PTTDWLVSWAKSRSL-NVDQNLSIVQYRKLSSHNKV 207
+ LE G + E PT L+ L ++ + V SS K
Sbjct: 383 RILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKW 442
Query: 208 CGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRR-FQKLIKDME 266
+ +K + M G +L C+YY +GK+ + ++R Q+ +M
Sbjct: 443 --MAVKCVHRQDRSEM-CFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMA 499
Query: 267 DSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSED 322
+GLR IAFA G ++ L L L G+ R +K V L GVRII+++ D
Sbjct: 500 SAGLRVIAFASGP------EKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGD 553
Query: 323 ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQ 382
+A LG S + GE+ ++ + + + + K+ +V+
Sbjct: 554 SQETAVSIARRLGMPSKTSQSV--SGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVK 611
Query: 383 TAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPIL 440
+++G VVA G D PALK AD+G+ T++A+E +D++++ ++L +
Sbjct: 612 ALQKRGDVVAM-TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670
Query: 441 KLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMM 500
+ G+ + NI+ F QL+ + L + + TL+ +P+ ++Q++W+ +M +
Sbjct: 671 EEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSL 730
Query: 501 RMEFKDQEPVTNPPARRTKSLLDKVMWKH---AAVQVLCQVVVLLIFQFAGQVIPGMNRD 557
+E D++ + PP R +L K + K +A+ ++ + + + + VI RD
Sbjct: 731 GVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITA--RD 788
Query: 558 IRKAMTFNSFTLCQVFN 574
MTF F +FN
Sbjct: 789 --TTMTFTCFVFFDMFN 803
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 8e-24
Identities = 94/421 (22%), Positives = 162/421 (38%), Gaps = 96/421 (22%)
Query: 51 FLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMG 110
P L+ AL V+ I V +P +TV+L +L +NL+A +G
Sbjct: 180 RGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLA-KKGILVRNLNALEELG 238
Query: 111 IASVICIDVTGGLLCNRVDVSKFCIGEKDVNND---VASEINQAVLQALERGIGASVLVP 167
+C D TG L N++ + I +N VA + N +E+ +
Sbjct: 239 KVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYLSGDPMEKAL------- 291
Query: 168 EISVWPTTDWLVSWAKSR--SLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHI 225
+ A+ + ++ I+ SS K V+ + D ++ +
Sbjct: 292 -----------LKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVI--VETPDGSDLLFV 338
Query: 226 NWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEI 285
G IL C+ +++ ++ GLR +AFA + E
Sbjct: 339 K--GAPEFILERCN-----------------NYEEKYLELARQGLRVLAFASKELE---- 375
Query: 286 KENGLHLLALAG----LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES 341
+ L L L LR + K T+E L+ AG+++++++ D +L +A ELG
Sbjct: 376 --DDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELG------ 427
Query: 342 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFG-GSSTR 400
I + E KL +V+ ++KGH+VA G G
Sbjct: 428 --IDVFARVSPE----------------------QKLQIVEALQKKGHIVAMTGDG--VN 461
Query: 401 DTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKFTKLQL 458
D PALK+ADVGI A+ +DIV+ + +++ +K GR + NI+ +
Sbjct: 462 DAPALKKADVGIAMG------AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAI 515
Query: 459 T 459
Sbjct: 516 A 516
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 89.2 bits (222), Expect = 1e-20
Identities = 36/168 (21%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Query: 477 ESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLC 536
P+T IQ++W+ + L L + E + + + PP + + L + + + +Q L
Sbjct: 1 PLPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLL 60
Query: 537 QVVVLLIFQFAGQVIPGMN-RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKIN 595
+V L+ F G + G++ + + M FN+ L Q+FN +A L + + +
Sbjct: 61 IAIVTLLVFFLGLLGFGISESGLAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSNKL 120
Query: 596 FLVVFVIVIAVQVLVVE--FATSLAGYQRLNGMHWGICFILAVLPWGI 641
L+ ++ + +Q+L++ ++ G L+ W I LA++ +
Sbjct: 121 LLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLV 168
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 3e-16
Identities = 73/306 (23%), Positives = 138/306 (45%), Gaps = 31/306 (10%)
Query: 206 KVCGVLMKINGGDEDKIMHINWS-GTASTILNMCSYYYDSEGKSFEIKGE-KRRFQKLIK 263
K VL K + G + + G +L C++ + +G++ + + K +IK
Sbjct: 433 KSMSVLCKPSTG------NKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIK 486
Query: 264 DM-EDSGLRPIAFA---CGQ---------TEVSEIKENGLHLLALAGL----REEIKSTV 306
+M LR +A A E E+ L + + G+ R E+ +
Sbjct: 487 EMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAI 546
Query: 307 EALRNAGVRIILVSEDELLAVTEVACELGNFRP--ESNDIALEGEQFRELNSTERMAKLD 364
E R AG+R+I+++ D + +G F P + + G +F E+ ++ A
Sbjct: 547 EKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACR 606
Query: 365 SMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARE 424
S L + K LV+ +E+G +VA G D PALK+AD+GI + TE+A+E
Sbjct: 607 SAVLFSRVEPSHKSELVELLQEQGEIVA-MTGDGVNDAPALKKADIGIAMGSG-TEVAKE 664
Query: 425 CSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITS 482
SD+V++ +++ ++ GR Y N+++F + ++ ++ +T + +
Sbjct: 665 ASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIP 724
Query: 483 IQLIWV 488
+QL+WV
Sbjct: 725 VQLLWV 730
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 2e-15
Identities = 78/324 (24%), Positives = 134/324 (41%), Gaps = 42/324 (12%)
Query: 229 GTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDME---DSGLRPIAFAC-------- 277
G I+ CS +G + R + +I +ME GLR +AFA
Sbjct: 558 GAFERIIECCSSSNGKDGVKISPLEDCDR-ELIIANMESLAAEGLRVLAFASKSFDKADN 616
Query: 278 ------GQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAV 327
+T E+ L L L G+ R E VE AG+ + +++ D
Sbjct: 617 NDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETA 676
Query: 328 TEVACELG----NFRPESNDI----ALEGEQFRELNSTERMAKLDSMTL-MGSCLAADKL 378
+A E+G NF + ++I + G QF L S E + L ++ L + C K+
Sbjct: 677 KAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL-SDEEVDDLKALCLVIARCAPQTKV 735
Query: 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSL 436
+++ + A G D+P+LK A+VGI +++A++ SDIV+S S+
Sbjct: 736 KMIEALHRRKAFCAM-TGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASI 794
Query: 437 LPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEES------PITSIQLIWVYC 490
L ++ GR + NI KF L L I L+ L + P++ ++++W
Sbjct: 795 LNAIEEGRRMFDNIMKFV-LHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIM 853
Query: 491 IMYILGGLMMRMEFKDQEPVTNPP 514
I + + +E + + P
Sbjct: 854 ITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 78.8 bits (194), Expect = 6e-15
Identities = 104/500 (20%), Positives = 197/500 (39%), Gaps = 81/500 (16%)
Query: 64 SALTVVAIAV---QHGMPFVITVSLF-----FWKEKLLINHHAKPQNLSAGATMGIASVI 115
+ L +A+AV +P +++ +L K+K+++ LSA G ++
Sbjct: 286 AFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKE------LSAIQNFGAMDIL 339
Query: 116 CIDVTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQ--------------ALERGIG 161
C D TG L +++++ K D + E ++ VL+ L+ +
Sbjct: 340 CTDKTGTLTQDKIELEKHI--------DSSGETSERVLKMAWLNSYFQTGWKNVLDHAVL 391
Query: 162 ASVLVPEISVWPTTDWLVSWAKSRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGD 218
A + + S T W K + D + LS+V + +C
Sbjct: 392 AKL---DESAARQTA--SRWKKVDEIPFDFDRRRLSVVVENRAEVTRLIC---------- 436
Query: 219 EDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACG 278
G +L +C++ + EK Q + +M G+R IA A
Sbjct: 437 ---------KGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATK 487
Query: 279 QTEVSE-----IKENGLHLLALAGLREEIKST----VEALRNAGVRIILVSEDELLAVTE 329
+V E E L + G + K + + AL G+ + +++ D +
Sbjct: 488 TLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTAR 547
Query: 330 VACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGH 389
+ E+G ++ND L G EL+ E +L + K ++ K+ GH
Sbjct: 548 ICQEVG---IDANDF-LLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGH 603
Query: 390 VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAY 447
V F G D PAL++ADVGI+ + ++A+E SDI++ ++ L + GR +
Sbjct: 604 TVGFLG-DGINDAPALRKADVGISVDT-AADIAKEASDIILLEKSLMVLEEGVIEGRNTF 661
Query: 448 CNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQ 507
NI K+ K+ + + LV + + P+ S+ L+ + ++Y L + + D+
Sbjct: 662 GNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLL-IQNLLYDFSQLTLPWDKMDR 720
Query: 508 EPVTNPPARRTKSLLDKVMW 527
E + P K + ++
Sbjct: 721 EFLKKPHQWEQKGMGRFMLC 740
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 9e-10
Identities = 47/199 (23%), Positives = 78/199 (39%), Gaps = 48/199 (24%)
Query: 258 FQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA-GLREEIKSTVEALRNAGVRI 316
+ I+ +E G + A V ++ALA LR + K + AL+ G+++
Sbjct: 505 LSERIEALESEGKTVVFVAVDGKLVG--------VIALADELRPDAKEAIAALKALGIKV 556
Query: 317 ILVSEDELLAVTEVACELG--NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374
++++ D +A ELG R E L
Sbjct: 557 VMLTGDNRRTAEAIAKELGIDEVRAE-------------------------------LLP 585
Query: 375 ADKLLLVQTAKEKGHVVAFFG-GSSTRDTPALKEADVGITEENKCTEMARECSDIVI--S 431
DK +V+ + +G VA G G + D PAL ADVGI T++A E +D+V+
Sbjct: 586 EDKAEIVRELQAEGRKVAMVGDGIN--DAPALAAADVGIA-MGSGTDVAIEAADVVLMRD 642
Query: 432 TVGSLLPILKLGRCAYCNI 450
+ ++ + L R I
Sbjct: 643 DLSAVPEAIDLSRATRRII 661
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 4e-08
Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 36/178 (20%)
Query: 278 GQTEVSEIKENGLHLLALA---GLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 334
G T + NG LA L+ E K ++AL+ G+ ++++ D VA EL
Sbjct: 392 GGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL 451
Query: 335 GNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFF 394
G + L DK L++ +EKG VVA
Sbjct: 452 G-----------------------------IENVRAEVLPDDKAALIKKLQEKGKVVAMV 482
Query: 395 GGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNI 450
G D PAL +ADVGI T++A E +D+V+ + + + + L R I
Sbjct: 483 -GDGINDAPALAQADVGIA-IGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRI 538
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 4e-08
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 229 GTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFAC-----GQTEVS 283
G ILN+CS + RR +++ + GLR +A A + +
Sbjct: 473 GALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ 532
Query: 284 EIKENGLHLLA-LAGL---REEIKSTVEALRNAGVRI-ILVSEDELLAVTEVACELGNFR 338
E+ L L +A L +E ++AL+ +GV + IL + EL+A +V E+G
Sbjct: 533 RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVA-AKVCHEVG--- 588
Query: 339 PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSS 398
L G L+ E + TL K +V K +GHVV F G
Sbjct: 589 -LDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMG-DG 646
Query: 399 TRDTPALKEADVGITEENKCTEMARECSDIVI 430
D PAL+ AD+GI+ + ++ARE +DI++
Sbjct: 647 INDAPALRAADIGISVDG-AVDIAREAADIIL 677
|
Length = 902 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 6e-08
Identities = 83/380 (21%), Positives = 134/380 (35%), Gaps = 54/380 (14%)
Query: 65 ALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLL 124
L V I + MP V++V++ +L A L+A + ++C D TG L
Sbjct: 242 VLLVGGIPI--AMPAVLSVTMAVGAAEL-AKKKAIVTRLTAIEELAGMDILCSDKTGTLT 298
Query: 125 CNRVDVSKFCI-GEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAK 183
N++ + + +DV + A L + E A + A
Sbjct: 299 LNKLSIDEILPFFNGFDKDDV---LLYAALASREEDQDA----------------IDTAV 339
Query: 184 SRSLNVDQNLSIVQYRKLSSH--NKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYY 241
S D + Y+ L + V E G IL++C
Sbjct: 340 LGSA-KDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLC-DN 397
Query: 242 YDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL--- 298
+ E + + ++ G R + A +E H L L L
Sbjct: 398 KKEIEEKVE---------EKVDELASRGYRALGVA------RTDEEGRWHFLGLLPLFDP 442
Query: 299 -REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG---NFRPESNDIALEGEQFREL 354
R + K T+E R+ GV + +V+ D L E A LG N + +
Sbjct: 443 PRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPS 502
Query: 355 NSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE 414
E + D + K +V+ +++GH+V G D PALK+ADVGI
Sbjct: 503 GLGEMVEDADGFAEV---FPEHKYEIVEILQKRGHLVGM-TGDGVNDAPALKKADVGIAV 558
Query: 415 ENKCTEMARECSDIVISTVG 434
T+ AR +DIV++ G
Sbjct: 559 AG-ATDAARSAADIVLTEPG 577
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 2e-07
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 34/135 (25%)
Query: 298 LREEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNS 356
LR E K + AL+ AG ++++++ D A VA ELG ++
Sbjct: 385 LRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI------------DEVH---- 428
Query: 357 TERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFG-GSSTRDTPALKEADVGITEE 415
L DKL +V+ +E+G VVA G G D PAL ADVGI
Sbjct: 429 -------------AELLPEDKLAIVKELQEEGGVVAMVGDG--INDAPALAAADVGIA-M 472
Query: 416 NKCTEMARECSDIVI 430
+++A E +DIV+
Sbjct: 473 GAGSDVAIEAADIVL 487
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 5e-06
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 31/134 (23%)
Query: 298 LREEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNS 356
R + + L+ G+ ++++++ D VA ELG ++
Sbjct: 363 PRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI------------DEVH---- 406
Query: 357 TERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEEN 416
L DKL +V+ +EK VA G D PAL ADVGI
Sbjct: 407 -------------AELLPEDKLEIVKELREKYGPVAMVG-DGINDAPALAAADVGIAMGA 452
Query: 417 KCTEMARECSDIVI 430
+++A E +D+V+
Sbjct: 453 SGSDVAIETADVVL 466
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 5e-04
Identities = 58/265 (21%), Positives = 103/265 (38%), Gaps = 70/265 (26%)
Query: 205 NKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDS-EGKSFEIKGEKRRFQKLIK 263
N+ + + G E+++ + S ++ EG+S +K + L +
Sbjct: 314 NRQASEFIPVPGVSEEELADAAQ---------LASLADETPEGRSIVELAKKLGIE-LRE 363
Query: 264 DMEDSGLRPIAFACGQTEVSEIKENGLHLL---ALAGLREEIKST-------VEAL---- 309
D S + F QT +S + G + A+ +R ++ ++A
Sbjct: 364 DDLQSHAEFVPFT-AQTRMSGVDLPGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEV 422
Query: 310 -RNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEG--EQFRELNSTERMAKLDSM 366
R G +++V +L V + DI G E+F EL K+
Sbjct: 423 SRLGGTPLVVVENGRILGVIYL-----------KDIVKPGIKERFAELR------KMGIK 465
Query: 367 TLM--------GSCLAA--------------DKLLLVQTAKEKGHVVAFFGGSSTRDTPA 404
T+M + +AA DKL L++ + +G +VA G T D PA
Sbjct: 466 TVMITGDNPLTAAAIAAEAGVDDFIAEATPEDKLALIRQEQAEGRLVAMTG-DGTNDAPA 524
Query: 405 LKEADVGITEENKCTEMARECSDIV 429
L +ADVG+ N T+ A+E +++V
Sbjct: 525 LAQADVGVA-MNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 9e-04
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 31/128 (24%)
Query: 302 IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMA 361
IK LR G++ I+++ D L +A E G
Sbjct: 451 IKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG-------------------------- 484
Query: 362 KLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEM 421
+D + DK+ L++ + +G +VA G T D PAL +ADVG+ N T+
Sbjct: 485 -VDD--FIAEATPEDKIALIRQEQAEGKLVAM-TGDGTNDAPALAQADVGVA-MNSGTQA 539
Query: 422 ARECSDIV 429
A+E +++V
Sbjct: 540 AKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (94), Expect = 0.003
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 33/149 (22%)
Query: 298 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 357
+++ + LR G+ ++ + D L +A E G R
Sbjct: 442 IKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------------------- 482
Query: 358 ERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENK 417
+ C DK+ +++ + KGH+VA G T D PAL EA+VG+ N
Sbjct: 483 ----------FVAECKPEDKINVIREEQAKGHIVA-MTGDGTNDAPALAEANVGLA-MNS 530
Query: 418 CTEMARECSDIV--ISTVGSLLPILKLGR 444
T A+E ++++ S L+ ++ +G+
Sbjct: 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGK 559
|
Length = 673 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.004
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 308 ALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMT 367
ALR GV + +++ D + ++ E+G P L G + ++ +++ T
Sbjct: 561 ALRENGVAVKVLTGDNPIVTAKICREVG-LEPG---EPLLGTEIEAMDDAALAREVEERT 616
Query: 368 LMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD 427
+ K +++ + GH V F G D PAL++ADVGI+ ++ ++A+E +D
Sbjct: 617 VFAKLTPLQKSRVLKALQANGHTVGFLG-DGINDAPALRDADVGISVDSG-ADIAKESAD 674
Query: 428 IVI 430
I++
Sbjct: 675 IIL 677
|
Length = 903 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 703 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.92 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.85 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.64 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.64 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.38 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.99 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.91 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.89 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.86 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.85 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.84 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.82 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.81 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.8 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.77 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.77 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.72 | |
| PLN02887 | 580 | hydrolase family protein | 98.7 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.7 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.65 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.61 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.59 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.59 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.56 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.52 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.48 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.41 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.4 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.32 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.29 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.26 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.22 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.22 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.07 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.06 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.04 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.04 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.03 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.01 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.0 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.0 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.99 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.94 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.91 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.87 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.83 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 97.76 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.69 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.66 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.61 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.55 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.53 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.48 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.32 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.3 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.22 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.17 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.14 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.13 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.11 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.07 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.04 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.04 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.98 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.95 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.95 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.93 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.93 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.69 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.69 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.65 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.64 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.63 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.58 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.54 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.53 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.46 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.38 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.35 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.26 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.25 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.18 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.16 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.16 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.1 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.05 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.0 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.0 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.98 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.93 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.9 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.81 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.79 | |
| PLN02940 | 382 | riboflavin kinase | 95.7 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.69 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.67 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.18 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.17 | |
| PLN02811 | 220 | hydrolase | 95.1 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.79 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.78 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.3 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.28 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.15 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.04 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.0 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.78 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 93.76 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.27 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 93.02 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.0 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.57 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.51 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.44 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.36 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.29 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.95 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 91.94 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 91.9 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 91.73 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 91.71 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.61 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 91.61 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 89.53 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 89.24 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 89.23 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 88.4 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 87.2 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 86.9 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 85.63 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 85.25 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 85.06 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 84.93 | |
| PLN02151 | 354 | trehalose-phosphatase | 84.87 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 84.69 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 83.34 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 82.36 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 82.17 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-120 Score=993.32 Aligned_cols=633 Identities=32% Similarity=0.519 Sum_probs=587.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCccccccccchhhhhhhhccCcchHHHHHHHHHHhhhhhcCCchHHH
Q 044228 1 MENLSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGNVSVGTVVKLFERFLLKPQGKISILVSALTVVAIAVQHGMPFV 80 (703)
Q Consensus 1 i~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~~P~~L~la 80 (703)
|||+|+++|.++|++++++|+.+.+..+ .+ +.|.+... ..+.+.+.|..+++++|+|+|+|||+|
T Consensus 340 Igk~Gl~~A~~~~~VL~~r~~~~~~~~~-~~-~~~~~~~~-------------~~~~~v~~f~i~VTilVVAVPEGLPLA 404 (1034)
T KOG0204|consen 340 IGKIGLLFAALTFIVLVIRFFIGKTKIE-GG-TGTTWSDE-------------YIQEFVKFFIIAVTILVVAVPEGLPLA 404 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeeecC-CC-CCccccHH-------------HHHHHHHHhhheeEEEEEECCCCccHH
Confidence 7999999999999999999999988333 22 22322211 235899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeecCCCCc--ccccHHHHHHHHH
Q 044228 81 ITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVA--SEINQAVLQALER 158 (703)
Q Consensus 81 ~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 158 (703)
++++++++++|| .|++.|||+++|||+||+.++||+|||||||.|+|+|.+.+++++.+..+.. +..++.+.+++..
T Consensus 405 VTLsLAys~kkM-mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~ 483 (1034)
T KOG0204|consen 405 VTLSLAYSMKKM-MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQ 483 (1034)
T ss_pred HHHHHHHHHHHH-hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999999999988774433 4688999999998
Q ss_pred Hhc-cc---cc-------CCcccCChHHHHHHHHHHhCCC---ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEE
Q 044228 159 GIG-AS---VL-------VPEISVWPTTDWLVSWAKSRSL---NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMH 224 (703)
Q Consensus 159 ~~~-~~---~~-------~~~~~~~p~e~Al~~~~~~~~~---~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~ 224 (703)
++. ++ +. ..+..|+|+|+||+.+..++|. ..+++.++.+.+||+|.||+||++++.+++.. |
T Consensus 484 gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~---y- 559 (1034)
T KOG0204|consen 484 GIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGH---Y- 559 (1034)
T ss_pred HHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCe---E-
Confidence 887 22 21 3467999999999999999987 66788999999999999999999999887763 5
Q ss_pred EEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecC----------cccccccCcEEE
Q 044228 225 INWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------VSEIKENGLHLL 293 (703)
Q Consensus 225 l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----------~~~~~e~~l~~l 293 (703)
+|+|||+|.++..|+++++.+|+..++ ++.+..+++.++.|+++|+||+|+|||++. ..+..+.+|+++
T Consensus 560 ~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~l 639 (1034)
T KOG0204|consen 560 VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLL 639 (1034)
T ss_pred EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEE
Confidence 999999999999999999999999999 888889999999999999999999999843 224668999999
Q ss_pred EEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE
Q 044228 294 ALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM 369 (703)
Q Consensus 294 G~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~ 369 (703)
|++++ |||++++|+.|++|||+|.|+||||..||++||.+|||.+++....+++|++|++++++|++++.++++|+
T Consensus 640 aivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~Vl 719 (1034)
T KOG0204|consen 640 AIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVL 719 (1034)
T ss_pred EEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheee
Confidence 99999 99999999999999999999999999999999999999999777899999999999999999999999999
Q ss_pred EEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhh
Q 044228 370 GSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAY 447 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~ 447 (703)
||.+|.||..+|+.++++|++|+++|| |+||+|||++||||.|||..|+++||++||++++ ||++|+++++|||++|
T Consensus 720 ARSSP~DK~lLVk~L~~~g~VVAVTGD-GTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY 798 (1034)
T KOG0204|consen 720 ARSSPNDKHLLVKGLIKQGEVVAVTGD-GTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVY 798 (1034)
T ss_pred ecCCCchHHHHHHHHHhcCcEEEEecC-CCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999 9999999999999999
Q ss_pred hchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHH
Q 044228 448 CNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMW 527 (703)
Q Consensus 448 ~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~ 527 (703)
.+|+|+++|+++.|++++.+.|.+++..+.+|++++|+||+|++||++.++|+|+|||++++|+|+|++|+.+++++.||
T Consensus 799 ~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMw 878 (1034)
T KOG0204|consen 799 DNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMW 878 (1034)
T ss_pred HHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCcc------cccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHH
Q 044228 528 KHAAVQVLCQVVVLLIFQFAGQVIPGMN------RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFV 601 (703)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~ 601 (703)
.++++|++||.++++.+.|.+...|+.+ +...+|++|++||++|+||.++.|++++.++|+++++|++|+..+.
T Consensus 879 knil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~ 958 (1034)
T KOG0204|consen 879 KNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIIT 958 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEee
Confidence 9999999999999999999888776432 5578899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044228 602 IVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLD 654 (703)
Q Consensus 602 ~~~~~~~~~~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~ 654 (703)
..+++|++++.+++.+|++.++++.+|++|++++++.+++.+++|.+.....|
T Consensus 959 ~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~ 1011 (1034)
T KOG0204|consen 959 ITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLP 1011 (1034)
T ss_pred eeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccc
Confidence 99999999999999999999999999999999999999999999998766544
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-102 Score=849.98 Aligned_cols=594 Identities=21% Similarity=0.326 Sum_probs=524.3
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
..+...|..++++.++++|+|||..++++++.|.+|| +|++++||++.++|+||.+++||+|||||||+|+|.+.++++
T Consensus 277 k~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM-akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~ 355 (972)
T KOG0202|consen 277 KGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRM-AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFI 355 (972)
T ss_pred hchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHH-HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEe
Confidence 5788999999999999999999999999999999999 999999999999999999999999999999999999999998
Q ss_pred CCeecCCC-------------C-----------cccccHHHHHHHHHH-hc--ccccCCcc-----cCChHHHHHHHHHH
Q 044228 136 GEKDVNND-------------V-----------ASEINQAVLQALERG-IG--ASVLVPEI-----SVWPTTDWLVSWAK 183 (703)
Q Consensus 136 ~~~~~~~~-------------~-----------~~~~~~~~~~~l~~~-~~--~~~~~~~~-----~~~p~e~Al~~~~~ 183 (703)
.+...... . .....+.+.+++..+ +| +++..+.. .|.|+|.||..+++
T Consensus 356 ~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlae 435 (972)
T KOG0202|consen 356 PDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAE 435 (972)
T ss_pred cccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHH
Confidence 76432211 0 111234455555544 33 33333333 89999999999999
Q ss_pred hCCCcc-c-----------------cccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccC
Q 044228 184 SRSLNV-D-----------------QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSE 245 (703)
Q Consensus 184 ~~~~~~-~-----------------~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~ 245 (703)
+.|... + +.++..+++||+|+||+|||.+..+.++. .+.+|+|||+|.|+++|+.++..+
T Consensus 436 Km~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~--~~~~fvKGA~E~Vl~rcs~~~~~~ 513 (972)
T KOG0202|consen 436 KMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQS--GYKMFVKGAPESVLERCSTYYGSD 513 (972)
T ss_pred HcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCc--cceEEecCChHHHHHhhhcEEccC
Confidence 998711 1 12355699999999999999998765531 178999999999999999988877
Q ss_pred Cc-eecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecC-------------cccccccCcEEEEEEee----cccHHHHH
Q 044228 246 GK-SFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTE-------------VSEIKENGLHLLALAGL----REEIKSTV 306 (703)
Q Consensus 246 g~-~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~-------------~~~~~e~~l~~lG~~~~----r~~~~~~I 306 (703)
|. ..|+ +..++.+.+...+|+++|+||+++|+++.+ .+...|+||+|+|++++ |++++++|
T Consensus 514 g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai 593 (972)
T KOG0202|consen 514 GQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAI 593 (972)
T ss_pred CceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHH
Confidence 74 4899 999999999999999999999999999654 35567999999999999 99999999
Q ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHH
Q 044228 307 EALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTA 384 (703)
Q Consensus 307 ~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~l 384 (703)
+.|+++||+|.|+|||+++||++||+++|+...++ ...+++|++++.++++++.+...++.+|+|++|+||.+||+.|
T Consensus 594 ~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaL 673 (972)
T KOG0202|consen 594 ELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEAL 673 (972)
T ss_pred HHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHH
Confidence 99999999999999999999999999999987643 4589999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhh
Q 044228 385 KEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCA 462 (703)
Q Consensus 385 q~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~ 462 (703)
|+.|++|+|+|| |+||+||||.||||||||.+|+|+||+|||+|+. ||++|+.+++|||.+|.||++++.|++..|+
T Consensus 674 q~~geivAMTGD-GVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnV 752 (972)
T KOG0202|consen 674 QSRGEVVAMTGD-GVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNV 752 (972)
T ss_pred HhcCCEEEecCC-CccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhH
Confidence 999999999999 9999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHH
Q 044228 463 SGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLL 542 (703)
Q Consensus 463 ~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 542 (703)
..+...+++..+..+.|+.|+|+||+|+++|.+|+.+++++||++++|++||++++.++++..++..++..|+|-.+...
T Consensus 753 gev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv 832 (972)
T KOG0202|consen 753 GEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATV 832 (972)
T ss_pred HHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888776665
Q ss_pred HHHHhhccc--CCcc-----------------------cccccchhhHHHHHHHHHHhhheeecccccccccccchHHHH
Q 044228 543 IFQFAGQVI--PGMN-----------------------RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFL 597 (703)
Q Consensus 543 ~~~~~~~~~--~~~~-----------------------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~ 597 (703)
..+++-+.. .... .....|+.|.++++...||.+++++.+..-+.-++|.|.++.
T Consensus 833 ~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~ 912 (972)
T KOG0202|consen 833 GVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLL 912 (972)
T ss_pred HhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHH
Confidence 554322211 1111 113349999999999999999999976555555999999999
Q ss_pred HHHHHHHHHHHHH--HHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 044228 598 VVFVIVIAVQVLV--VEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFL 653 (703)
Q Consensus 598 ~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~ 653 (703)
+++.+++++++++ +++++..|++.++++..|+..+.++...++.++++|++.|++.
T Consensus 913 ~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 913 WAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999875 4678999999999999999999999999999999999998663
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-98 Score=892.24 Aligned_cols=586 Identities=29% Similarity=0.435 Sum_probs=520.6
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
.++..++.+++++++++||||||+++|++++.++++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++.
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m-ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~ 399 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM-MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYI 399 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH-HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEE
Confidence 3688899999999999999999999999999999999 999999999999999999999999999999999999999987
Q ss_pred CCeecCCCCc-ccccHHHHHHHHHH-hccccc---C-----CcccCChHHHHHHHHHHhCCCc---cccccceEEEecCC
Q 044228 136 GEKDVNNDVA-SEINQAVLQALERG-IGASVL---V-----PEISVWPTTDWLVSWAKSRSLN---VDQNLSIVQYRKLS 202 (703)
Q Consensus 136 ~~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~---~-----~~~~~~p~e~Al~~~~~~~~~~---~~~~~~~l~~~~F~ 202 (703)
.+..++.++. ...++...+++..+ .|++.. . .+..+||+|.|+++++++.|.+ .+..+++++.+||+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~ 479 (941)
T TIGR01517 400 GEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFN 479 (941)
T ss_pred ecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccC
Confidence 6644432211 11123344444333 232221 1 1457999999999999877652 23457788899999
Q ss_pred CCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCc
Q 044228 203 SHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV 282 (703)
Q Consensus 203 s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~ 282 (703)
|++|||+++++.++++ +++++|||||.++++|+.+...+|...++++.++++++.+++++++|+|++++||++++.
T Consensus 480 s~~k~msvv~~~~~~~----~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~ 555 (941)
T TIGR01517 480 SERKFMSVVVKHSGGK----VREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAP 555 (941)
T ss_pred CCCCeEEEEEEeCCCc----EEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCc
Confidence 9999999999976665 899999999999999998776678777772278889999999999999999999998752
Q ss_pred -----ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhc
Q 044228 283 -----SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRE 353 (703)
Q Consensus 283 -----~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~ 353 (703)
.+..|++|+|+|++++ |+|++++|+.||++||+++|+|||++.||.++|++|||.++ ...+++|+++++
T Consensus 556 ~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~ 633 (941)
T TIGR01517 556 EEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF--GGLAMEGKEFRR 633 (941)
T ss_pred cccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC--CceEeeHHHhhh
Confidence 2334889999999999 99999999999999999999999999999999999999865 568999999999
Q ss_pred cCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--
Q 044228 354 LNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-- 431 (703)
Q Consensus 354 ~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~-- 431 (703)
+.++++.+.+.++.+|||++|+||.++|+.+|++|++|+|+|| |+||+|||++||||||||.+|+|+|+++||+++.
T Consensus 634 l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GD-GvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd 712 (941)
T TIGR01517 634 LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGD-GTNDAPALKLADVGFSMGISGTEVAKEASDIILLDD 712 (941)
T ss_pred CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECC-CCchHHHHHhCCcceecCCCccHHHHHhCCEEEecC
Confidence 9999999999999999999999999999999999999999999 9999999999999999997799999999999999
Q ss_pred ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 044228 432 TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVT 511 (703)
Q Consensus 432 ~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~ 511 (703)
+|++|++++++||++|+|+++++.|.+++|+..+++.+++.++.++.|++++|++|+|+++|.+|++++++++|++++|+
T Consensus 713 ~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~ 792 (941)
T TIGR01517 713 NFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLD 792 (941)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHh
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc---------ccccccchhhHHHHHHHHHHhhheeecc
Q 044228 512 NPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGM---------NRDIRKAMTFNSFTLCQVFNQFDAMCLL 582 (703)
Q Consensus 512 ~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~t~~f~~~v~~~~~~~~~~r~~~ 582 (703)
+||++++.+++++.+|..+++++++++++.+++++....+++. .....+|+.|++++++|+++.+++|+.+
T Consensus 793 ~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~ 872 (941)
T TIGR01517 793 RKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLY 872 (941)
T ss_pred CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999999888777654433211 1245789999999999999999999866
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 044228 583 KKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIA 649 (703)
Q Consensus 583 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~ 649 (703)
..++|+++++|++++.++.++++++++++++++.+|++.++++.+|+++++++++.+++.++.|.+.
T Consensus 873 ~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~ 939 (941)
T TIGR01517 873 ERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIP 939 (941)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5577888889999999999999999999999999999999999999999999999999999998863
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-95 Score=864.84 Aligned_cols=571 Identities=24% Similarity=0.385 Sum_probs=496.5
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..+++++++++++++|+|||+.++++++.++++| +|++++||+++++|+||++|+||||||||||||+|+|++++..
T Consensus 294 ~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~m-ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~ 372 (917)
T COG0474 294 GLLESFLTALALAVAAVPEGLPAVVTIALALGAQRM-AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYIN 372 (917)
T ss_pred cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH-HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeC
Confidence 378999999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred C--eecCCCCcccccHHHHH-HHHHHhcccccC----CcccCChHHHHHHHHHHhCCC-----ccccccceEEEecCCCC
Q 044228 137 E--KDVNNDVASEINQAVLQ-ALERGIGASVLV----PEISVWPTTDWLVSWAKSRSL-----NVDQNLSIVQYRKLSSH 204 (703)
Q Consensus 137 ~--~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~----~~~~~~p~e~Al~~~~~~~~~-----~~~~~~~~l~~~~F~s~ 204 (703)
+ .... +.....++...+ ++..+.||+... ++..+||+|.||++++++.|. ..+.++++++.+||+|+
T Consensus 373 ~~~~~~~-~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~ 451 (917)
T COG0474 373 GGGKDID-DKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSE 451 (917)
T ss_pred CCccccc-ccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCC
Confidence 4 2111 111122233333 344456665542 345899999999999998775 23455678999999999
Q ss_pred CCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCc-
Q 044228 205 NKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV- 282 (703)
Q Consensus 205 ~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~- 282 (703)
|||||++++..+++ +++++|||||.|+++|++. |...++ ++.++.+++..++++++|+||+++|||.++.
T Consensus 452 rKrMsviv~~~~~~----~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~ 523 (917)
T COG0474 452 RKRMSVIVKTDEGK----YILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRA 523 (917)
T ss_pred ceEEEEEEEcCCCc----EEEEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 99999999976665 8999999999999999986 666777 8899999999999999999999999997761
Q ss_pred -----ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhc
Q 044228 283 -----SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRE 353 (703)
Q Consensus 283 -----~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~ 353 (703)
.++.|+||+|+|+++| |+|++++|+.|++|||++||+||||++||++||++||+..+...+.+++|++++.
T Consensus 524 ~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~ 603 (917)
T COG0474 524 EKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDA 603 (917)
T ss_pred cccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhh
Confidence 1578999999999999 9999999999999999999999999999999999999987532267999999999
Q ss_pred cCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--
Q 044228 354 LNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-- 431 (703)
Q Consensus 354 ~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~-- 431 (703)
+.++++.+.++++.||||++|+||.++|+.+|++|++|+|+|| |+||+||||+||||||||++|+|+||++||+++.
T Consensus 604 l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGD-GvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd 682 (917)
T COG0474 604 LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGD-GVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDD 682 (917)
T ss_pred cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCC-CchhHHHHHhcCccEEecccHHHHHHhhcceEeecC
Confidence 9999999999999999999999999999999999999999999 9999999999999999998899999999999999
Q ss_pred ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 044228 432 TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEE-SPITSIQLIWVYCIMYILGGLMMRMEFKDQEPV 510 (703)
Q Consensus 432 ~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~-~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~ 510 (703)
+|..+..+++|||++|.|+++++.|.+++|+..+++.+++.++..+ .|++++|++|+|+++|.+|+++++.++|+.+.|
T Consensus 683 ~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m 762 (917)
T COG0474 683 NFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVM 762 (917)
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCccccc
Confidence 9999999999999999999999999999999999999998888876 899999999999999999999999999999999
Q ss_pred CCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhccc-CCc-------ccccccchhhHHHHHHHHHHhhheeecc
Q 044228 511 TNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVI-PGM-------NRDIRKAMTFNSFTLCQVFNQFDAMCLL 582 (703)
Q Consensus 511 ~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~t~~f~~~v~~~~~~~~~~r~~~ 582 (703)
++||++++.++++++.++.++++..++.++++++.|..... +.. ......|+.|..+++++.++.+.+|..
T Consensus 763 ~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~- 841 (917)
T COG0474 763 KRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR- 841 (917)
T ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 99999999999999999998887777666666554433222 111 145578999999999999999999984
Q ss_pred cccccc-cccchHHHHHHHHHHHHHHHHHHH--HHh-hccccccCChhHHHHHHHHHHHHH
Q 044228 583 KKAVQP-VVLKKINFLVVFVIVIAVQVLVVE--FAT-SLAGYQRLNGMHWGICFILAVLPW 639 (703)
Q Consensus 583 ~~~~~~-~~~~n~~~~~~~~~~~~~~~~~~~--~~~-~~f~~~~l~~~~wl~~l~~~~~~l 639 (703)
+.+++. .++.|+.++++++++.+++++..+ ... ..|+..+++...|+.++.+.....
T Consensus 842 ~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 902 (917)
T COG0474 842 GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLL 902 (917)
T ss_pred ccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHH
Confidence 345555 357899999999888888877654 445 578999999888988776664443
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-93 Score=855.44 Aligned_cols=587 Identities=17% Similarity=0.232 Sum_probs=499.3
Q ss_pred HHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCe
Q 044228 59 ISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEK 138 (703)
Q Consensus 59 ~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~ 138 (703)
...+.++++++++++|+|||+.++++++.|++|| +|+|++||+++++|+||++++||+|||||||+|+|+|.+++..+.
T Consensus 307 ~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM-ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~ 385 (1053)
T TIGR01523 307 KEVAIYAICLAISIIPESLIAVLSITMAMGAANM-SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRF 385 (1053)
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCC
Confidence 4567789999999999999999999999999999 999999999999999999999999999999999999999987531
Q ss_pred -e---------cCCC-Cc------------------------------c--c-----ccHHHHHHHHHH-hccccc--CC
Q 044228 139 -D---------VNND-VA------------------------------S--E-----INQAVLQALERG-IGASVL--VP 167 (703)
Q Consensus 139 -~---------~~~~-~~------------------------------~--~-----~~~~~~~~l~~~-~~~~~~--~~ 167 (703)
. |..+ .. . . .++...+++..+ +|+... .+
T Consensus 386 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~ 465 (1053)
T TIGR01523 386 GTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKD 465 (1053)
T ss_pred ceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeecc
Confidence 1 1000 00 0 0 011233444433 343221 11
Q ss_pred ------cccCChHHHHHHHHHHhCCCcc----------------------------ccccceEEEecCCCCCCeEEEEEE
Q 044228 168 ------EISVWPTTDWLVSWAKSRSLNV----------------------------DQNLSIVQYRKLSSHNKVCGVLMK 213 (703)
Q Consensus 168 ------~~~~~p~e~Al~~~~~~~~~~~----------------------------~~~~~~l~~~~F~s~~k~msviv~ 213 (703)
...|||+|.||++++.+.|++. +..+++++++||+|+||||+++++
T Consensus 466 ~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~ 545 (1053)
T TIGR01523 466 DATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYE 545 (1053)
T ss_pred CCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEE
Confidence 3468999999999998776520 234788999999999999999998
Q ss_pred eCCCCcceeEEEEEeCChHHHHhhcccccccCC-ceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCc---------
Q 044228 214 INGGDEDKIMHINWSGTASTILNMCSYYYDSEG-KSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV--------- 282 (703)
Q Consensus 214 ~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g-~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~--------- 282 (703)
.+++.. +++|+|||||.|+++|+++...+| +..|+ ++.++++.+..++|+++|+||+++|||+++.
T Consensus 546 ~~~~~~---~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~ 622 (1053)
T TIGR01523 546 DNHGET---YNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLK 622 (1053)
T ss_pred eCCCCE---EEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhh
Confidence 765443 889999999999999998765454 46788 8889999999999999999999999998752
Q ss_pred -----ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--------CCcee
Q 044228 283 -----SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE--------SNDIA 345 (703)
Q Consensus 283 -----~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~--------~~~~v 345 (703)
++..|+||+|+|++++ |+|++++|+.||++||++||+|||++.||.++|+++||.+++ ....+
T Consensus 623 ~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~v 702 (1053)
T TIGR01523 623 NETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMV 702 (1053)
T ss_pred ccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccccccccccccee
Confidence 1345899999999999 999999999999999999999999999999999999997531 13589
Q ss_pred eechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhc
Q 044228 346 LEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC 425 (703)
Q Consensus 346 i~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~a 425 (703)
++|++++.++++++.+...++.||||++|+||.++|+.+|++|++|+|+|| |+||+|||++||||||||.+|+++|+++
T Consensus 703 itG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GD-GvNDapaLk~AdVGIAmg~~gt~vak~a 781 (1053)
T TIGR01523 703 MTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGD-GVNDSPSLKMANVGIAMGINGSDVAKDA 781 (1053)
T ss_pred eehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCC-CcchHHHHHhCCccEecCCCccHHHHHh
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999997899999999
Q ss_pred cchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhc---C--CCchhHHHHHHHHHHHHHHHHH
Q 044228 426 SDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLIL---E--ESPITSIQLIWVYCIMYILGGL 498 (703)
Q Consensus 426 ad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~---~--~~pl~~~~~l~~~~~~~~l~~l 498 (703)
||+++. +|++|.+++++||++|+|+++++.|.++.|+..+++.+++.++. + +.|++++|++|+|+++|.+|++
T Consensus 782 ADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~pal 861 (1053)
T TIGR01523 782 SDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAM 861 (1053)
T ss_pred cCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHH
Confidence 999999 89999999999999999999999999999999999999888774 2 4799999999999999999999
Q ss_pred hhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccC--C--------------cccccccch
Q 044228 499 MMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIP--G--------------MNRDIRKAM 562 (703)
Q Consensus 499 ~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~~t~ 562 (703)
++++|+|++++|++||+.++.+++++.++..++..+++.++..+..+++.+..+ + .+..+..|+
T Consensus 862 aL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~ 941 (1053)
T TIGR01523 862 GLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSA 941 (1053)
T ss_pred hhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHH
Confidence 999999999999999999999999999999999999888877766554221100 0 012356899
Q ss_pred hhHHHHHHHHHHhhheeecccccccc----------------cccchHHHHHHHHHHHHHHHHHH--HHHhh-ccccccC
Q 044228 563 TFNSFTLCQVFNQFDAMCLLKKAVQP----------------VVLKKINFLVVFVIVIAVQVLVV--EFATS-LAGYQRL 623 (703)
Q Consensus 563 ~f~~~v~~~~~~~~~~r~~~~~~~~~----------------~~~~n~~~~~~~~~~~~~~~~~~--~~~~~-~f~~~~l 623 (703)
.|.+++++|+++.+++|+.+. ++|+ +.++|++++++++++++++++++ |+++. +|++.++
T Consensus 942 ~f~~l~~~~~~~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l 1020 (1053)
T TIGR01523 942 AFATMTFCALILAVEVKDFDN-SFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPI 1020 (1053)
T ss_pred HHHHHHHHHHHHHHHHhcCch-hhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCc
Confidence 999999999999999998542 3332 35789999999998888887654 56775 9999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 624 NGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 624 ~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
++ .|+.++.++++.+++.+++|++.|++
T Consensus 1021 ~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1021 GA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 96 89999999999999999999887654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-92 Score=842.00 Aligned_cols=581 Identities=23% Similarity=0.323 Sum_probs=512.5
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||+++|++++.|++|| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 270 ~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~-ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~ 348 (884)
T TIGR01522 270 DWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRM-SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTS 348 (884)
T ss_pred CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEec
Confidence 677899999999999999999999999999999999 9999999999999999999999999999999999999999876
Q ss_pred CeecC--------CCC---------cccccHHHHHHHHH-Hhccccc----CCcccCChHHHHHHHHHHhCCCc-ccccc
Q 044228 137 EKDVN--------NDV---------ASEINQAVLQALER-GIGASVL----VPEISVWPTTDWLVSWAKSRSLN-VDQNL 193 (703)
Q Consensus 137 ~~~~~--------~~~---------~~~~~~~~~~~l~~-~~~~~~~----~~~~~~~p~e~Al~~~~~~~~~~-~~~~~ 193 (703)
+..+. ..+ ....++...+++.. ++|++.. .+...+||+|.|+++++++.|.+ .++.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~ 428 (884)
T TIGR01522 349 DGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETY 428 (884)
T ss_pred CceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhC
Confidence 53221 000 00112234444443 3443322 12345889999999999987763 33468
Q ss_pred ceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCce
Q 044228 194 SIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRP 272 (703)
Q Consensus 194 ~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~ 272 (703)
+.++++||+|++|||+++++...+++ +++|+|||||.|+++|++++..+|...++ ++.++++.+..++++++|+|+
T Consensus 429 ~~~~~~pF~s~~k~m~v~~~~~~~~~---~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rv 505 (884)
T TIGR01522 429 IRVAEVPFSSERKWMAVKCVHRQDRS---EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRV 505 (884)
T ss_pred cEEeEeCCCCCCCeEEEEEEEcCCCe---EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEE
Confidence 88999999999999999998753333 88999999999999999988777888888 888899999999999999999
Q ss_pred EEEEEeecCcccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeec
Q 044228 273 IAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEG 348 (703)
Q Consensus 273 l~~A~~~l~~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g 348 (703)
+++||+++ +++|+|+|++++ |+|++++|+.|+++|++++|+|||+++||.++|+++|+... ...+++|
T Consensus 506 l~~A~~~~------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g 577 (884)
T TIGR01522 506 IAFASGPE------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK--TSQSVSG 577 (884)
T ss_pred EEEEEEcC------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--CCceeEh
Confidence 99999973 678999999999 99999999999999999999999999999999999999865 4568999
Q ss_pred hhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccch
Q 044228 349 EQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI 428 (703)
Q Consensus 349 ~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~ 428 (703)
++++++.++++.+.+.+..+|||++|+||.++|+.+|++|++|+|+|| |.||+||+++||||||||.+|+++++++||+
T Consensus 578 ~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGD-GvND~pAl~~AdVGia~g~~g~~va~~aaDi 656 (884)
T TIGR01522 578 EKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGD-GVNDAPALKLADIGVAMGQTGTDVAKEAADM 656 (884)
T ss_pred HHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECC-CcccHHHHHhCCeeEecCCCcCHHHHHhcCE
Confidence 999999999999999999999999999999999999999999999999 9999999999999999986699999999999
Q ss_pred hhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCC
Q 044228 429 VIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKD 506 (703)
Q Consensus 429 vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~ 506 (703)
++. +|+.+.+++++||++|+|+++++.|.++.|+..+.+.+++.++..+.|++++|++|+|+++|.+|++++++++|+
T Consensus 657 vl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~ 736 (884)
T TIGR01522 657 ILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVD 736 (884)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCC
Confidence 998 899999999999999999999999999999999999888888888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccchhhHHHHHHHHHHhhheeecccccc
Q 044228 507 QEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAV 586 (703)
Q Consensus 507 ~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~ 586 (703)
+++|++||+.++++++++.++..++.+++++++..++.++..... +......+|++|.+++++|+++.+++|+. +.++
T Consensus 737 ~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~ 814 (884)
T TIGR01522 737 KDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-GVITARDTTMTFTCFVFFDMFNALACRSQ-TKSV 814 (884)
T ss_pred hhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcchhhHHHHHHHHHHHHHHHHHHHHccC-Cccc
Confidence 999999999999999999999999999999888776665543221 11234567999999999999999999985 4555
Q ss_pred cc-cccchHHHHHHHHHHHHHHHHHHH--HHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 587 QP-VVLKKINFLVVFVIVIAVQVLVVE--FATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 587 ~~-~~~~n~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
|+ +.++|+++++++++++++++++++ +++.+|++.++++.+|+++++++++.+++.++.|++.|++
T Consensus 815 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 815 FEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 65 678999999999999999987764 7899999999999999999999999999999999887643
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-92 Score=849.33 Aligned_cols=589 Identities=17% Similarity=0.224 Sum_probs=501.8
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.++++| +|+|+++|+++++|+||++++||||||||||+|+|+|.+++.+
T Consensus 290 ~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m-~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 368 (997)
T TIGR01106 290 TWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM-ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 368 (997)
T ss_pred CHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH-HHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEEC
Confidence 566788899999999999999999999999999999 9999999999999999999999999999999999999999987
Q ss_pred CeecCCCCc-------ccccHHHH-HHHH-HHhccccc-----------CCcccCChHHHHHHHHHHhCCC---cccccc
Q 044228 137 EKDVNNDVA-------SEINQAVL-QALE-RGIGASVL-----------VPEISVWPTTDWLVSWAKSRSL---NVDQNL 193 (703)
Q Consensus 137 ~~~~~~~~~-------~~~~~~~~-~~l~-~~~~~~~~-----------~~~~~~~p~e~Al~~~~~~~~~---~~~~~~ 193 (703)
+..+..+.. ........ .++. .++|++.. ..+..|||+|.||++++.+.+. +.++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~ 448 (997)
T TIGR01106 369 NQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERN 448 (997)
T ss_pred CeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhC
Confidence 765432210 00011122 2222 23443321 1235789999999999986543 345678
Q ss_pred ceEEEecCCCCCCeEEEEEEeCC--CCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCC
Q 044228 194 SIVQYRKLSSHNKVCGVLMKING--GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGL 270 (703)
Q Consensus 194 ~~l~~~~F~s~~k~msviv~~~~--~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~ 270 (703)
+.++.+||+|+||||+++++.++ +.. +++|+|||||.|+++|++++ .+|+..++ ++.++++++..++++++|+
T Consensus 449 ~~v~~~pF~s~rK~m~~v~~~~~~~~~~---~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~Gl 524 (997)
T TIGR01106 449 PKVVEIPFNSTNKYQLSIHENEDPRDPR---HLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGE 524 (997)
T ss_pred ceeEEeccCCCCceEEEEEeccCCCCce---EEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCC
Confidence 89999999999999999886432 222 88999999999999999876 47888888 8889999999999999999
Q ss_pred ceEEEEEeecCcc----------c---ccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Q 044228 271 RPIAFACGQTEVS----------E---IKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE 333 (703)
Q Consensus 271 r~l~~A~~~l~~~----------~---~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~ 333 (703)
||+++|||+++.. + ..|+||+|+|++++ |+|++++|++|+++||+++|+|||+..||.++|++
T Consensus 525 Rvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~ 604 (997)
T TIGR01106 525 RVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 604 (997)
T ss_pred EEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 9999999987521 1 23899999999999 99999999999999999999999999999999999
Q ss_pred cCCCCCCC----------------------CceeeechhhhccCHHHHHHhhccCc--eEEEeChhhHHHHHHHHHhCCC
Q 044228 334 LGNFRPES----------------------NDIALEGEQFRELNSTERMAKLDSMT--LMGSCLAADKLLLVQTAKEKGH 389 (703)
Q Consensus 334 ~gi~~~~~----------------------~~~vi~g~~l~~~~~~~~~~~~~~~~--v~~r~~P~~K~~iv~~lq~~g~ 389 (703)
+|+..++. ...+++|++++.++++++.+.+.++. ||||++|+||.++|+.+|+.|+
T Consensus 605 ~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~ 684 (997)
T TIGR01106 605 VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGA 684 (997)
T ss_pred cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCC
Confidence 99975421 13799999999999999999998875 9999999999999999999999
Q ss_pred EEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHH
Q 044228 390 VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLI 467 (703)
Q Consensus 390 ~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~ 467 (703)
+|+|+|| |+||+||||+||||||||.+|+|+|+++||+++. +|++++++++|||++|.|+++++.|.++.|+..+++
T Consensus 685 vv~~~GD-G~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~ 763 (997)
T TIGR01106 685 IVAVTGD-GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP 763 (997)
T ss_pred EEEEECC-CcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9999999 9999999999999999997799999999999999 799999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC-CCCccCHHHHHHHH-HHHHHHHHHHHHHH
Q 044228 468 TLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARR-TKSLLDKVMWKHAA-VQVLCQVVVLLIFQ 545 (703)
Q Consensus 468 ~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~-~~~l~~~~~~~~~~-~~~~~~~~~~~~~~ 545 (703)
.+++.++..++|++++|++|+|+++|++|++++++++|++++|++||+.+ +.+++++.++..++ ..|+++++..++.+
T Consensus 764 ~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~ 843 (997)
T TIGR01106 764 FLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTY 843 (997)
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988899999999999999999999999999999999999999985 67999998887654 44777776666554
Q ss_pred Hhhcc--------cCCc--------------c------c-------ccccchhhHHHHHHHHHHhhheeecccccccccc
Q 044228 546 FAGQV--------IPGM--------------N------R-------DIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVV 590 (703)
Q Consensus 546 ~~~~~--------~~~~--------------~------~-------~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~ 590 (703)
+.... .++. . . ...+|++|++++++|+++.+++|+. +.++|+..
T Consensus 844 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~ 922 (997)
T TIGR01106 844 FVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR-RNSVFQQG 922 (997)
T ss_pred HHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC-cccccccC
Confidence 43211 0110 0 0 1468999999999999999999994 44666544
Q ss_pred cchHHHHHHHHHHHHHHHHHH--HHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 591 LKKINFLVVFVIVIAVQVLVV--EFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 591 ~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
++|++++.+++++++++++++ ++++.+|++.++++.+|+++++++++.+++.++.|++.|++
T Consensus 923 ~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 923 MKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 789999888888888776654 45799999999999999999999999999999999888754
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-92 Score=843.76 Aligned_cols=585 Identities=21% Similarity=0.330 Sum_probs=508.1
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
.+..++..++++++++|||+||++++++++.++++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 235 ~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m-~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 313 (917)
T TIGR01116 235 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKM-AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVAL 313 (917)
T ss_pred HHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHH-HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEec
Confidence 456778889999999999999999999999999999 9999999999999999999999999999999999999999876
Q ss_pred Cee-------------cCCCCc--c-------cccHHHHHHHH-HHhccccc--C-C-----cccCChHHHHHHHHHHhC
Q 044228 137 EKD-------------VNNDVA--S-------EINQAVLQALE-RGIGASVL--V-P-----EISVWPTTDWLVSWAKSR 185 (703)
Q Consensus 137 ~~~-------------~~~~~~--~-------~~~~~~~~~l~-~~~~~~~~--~-~-----~~~~~p~e~Al~~~~~~~ 185 (703)
+.. |..... . ..++...+++. .++|++.. . + ...|||+|.||++++++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~ 393 (917)
T TIGR01116 314 DPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKM 393 (917)
T ss_pred CCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHc
Confidence 521 111000 0 00112222332 33454322 1 1 135899999999999987
Q ss_pred CCc-------------------cccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCC
Q 044228 186 SLN-------------------VDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEG 246 (703)
Q Consensus 186 ~~~-------------------~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g 246 (703)
|.+ .++.+++++++||+|+||||+|+++.+ ++ +++|+|||||.|+++|++++..+|
T Consensus 394 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~----~~~~~KGApe~il~~c~~~~~~~g 468 (917)
T TIGR01116 394 GLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TG----NKLFVKGAPEGVLERCTHILNGDG 468 (917)
T ss_pred CCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-Cc----EEEEEcCChHHHHHhccceecCCC
Confidence 751 134567899999999999999999864 43 889999999999999999887778
Q ss_pred ceecc-hHHHHHHHHHHHHHHh-cCCceEEEEEeecCc------------ccccccCcEEEEEEee----cccHHHHHHH
Q 044228 247 KSFEI-KGEKRRFQKLIKDMED-SGLRPIAFACGQTEV------------SEIKENGLHLLALAGL----REEIKSTVEA 308 (703)
Q Consensus 247 ~~~~l-~~~~~~~~~~~~~~~~-~G~r~l~~A~~~l~~------------~~~~e~~l~~lG~~~~----r~~~~~~I~~ 308 (703)
...|+ ++.++++.++++++++ +|+||+++|||+++. ++.+|+||+|+|++++ |++++++|+.
T Consensus 469 ~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~ 548 (917)
T TIGR01116 469 RAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEK 548 (917)
T ss_pred CeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHH
Confidence 88899 8889999999999999 999999999999752 1346899999999999 9999999999
Q ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--ceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHh
Q 044228 309 LRNAGVRIILVSEDELLAVTEVACELGNFRPESN--DIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKE 386 (703)
Q Consensus 309 l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~ 386 (703)
||++||+++|+|||+.+||.++|+++|+..++.. ...++|++++.+.+++..+...+..+|||++|+||.++|+.+|+
T Consensus 549 l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 628 (917)
T TIGR01116 549 CRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE 628 (917)
T ss_pred HHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999865322 35899999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHH
Q 044228 387 KGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASG 464 (703)
Q Consensus 387 ~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~ 464 (703)
.|++|+|+|| |.||+|||++|||||||| +|++.++++||+++. +|+++.++++|||++|+|+++++.|.+++|+..
T Consensus 629 ~g~~va~iGD-G~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~ 706 (917)
T TIGR01116 629 QGEIVAMTGD-GVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGE 706 (917)
T ss_pred cCCeEEEecC-CcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999 999999999999999999 799999999999999 699999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHH
Q 044228 465 LLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIF 544 (703)
Q Consensus 465 ~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 544 (703)
+++.+++.++..+.|++++|++|+|+++|.+|++++++++|++++|++||+.+++++++++++..|+.+|++++++.+..
T Consensus 707 ~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 786 (917)
T TIGR01116 707 VVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGG 786 (917)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887789999999999999999999999999999999999999999999999999999999999999886555
Q ss_pred HHhhcc---cCC--------c------------ccccccchhhHHHHHHHHHHhhheeecccccccc-cccchHHHHHHH
Q 044228 545 QFAGQV---IPG--------M------------NRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQP-VVLKKINFLVVF 600 (703)
Q Consensus 545 ~~~~~~---~~~--------~------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~ 600 (703)
+++... ..+ . ...+..|+.|.+++++|+++.+++|+. +.++|+ +.++|+++++++
T Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~ 865 (917)
T TIGR01116 787 FVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWVNKWLIGAI 865 (917)
T ss_pred HHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCccCHHHHHHH
Confidence 433221 100 0 124567999999999999999999995 345555 668999999999
Q ss_pred HHHHHHHHHH--HHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 044228 601 VIVIAVQVLV--VEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAG 650 (703)
Q Consensus 601 ~~~~~~~~~~--~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r 650 (703)
++++++++++ +++++.+|++.++++.+|+++++++++.+++.++.|+++|
T Consensus 866 ~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 866 CLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998887 6678999999999999999999999999999999998753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-90 Score=814.76 Aligned_cols=559 Identities=16% Similarity=0.196 Sum_probs=472.3
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.|+++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 315 ~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m-ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~ 393 (903)
T PRK15122 315 DWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM-ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDV 393 (903)
T ss_pred CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-HHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcC
Confidence 677899999999999999999999999999999999 9999999999999999999999999999999999999998743
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCc-cccccceEEEecCCCCCCeEEEEEEeC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLN-VDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~-~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
+.. . ++++++... +++.. +..++||+|.|+++++++.+.. ....++.++++||++.+|+|+++++..
T Consensus 394 ~~~-~-------~~~~l~~a~---l~s~~-~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~ 461 (903)
T PRK15122 394 SGR-K-------DERVLQLAW---LNSFH-QSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDA 461 (903)
T ss_pred CCC-C-------hHHHHHHHH---HhCCC-CCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcC
Confidence 321 1 123333322 12211 3457999999999999876642 234678899999999999999999876
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCcc-------cccc
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-------EIKE 287 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~-------~~~e 287 (703)
+|+ +++++|||||.++++|++... +|...++ ++.++++.+..++++++|+|++++|||+++.. +..|
T Consensus 462 ~~~----~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e 536 (903)
T PRK15122 462 QGQ----HLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADE 536 (903)
T ss_pred CCc----EEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccc
Confidence 665 789999999999999998754 6777788 77888999999999999999999999987521 2357
Q ss_pred cCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 288 NGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 288 ~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
+|++|+|++++ |+|++++|++||++||+++|+|||++.||.++|+++||.. ..+++|++++.++++++.+.+
T Consensus 537 ~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~~~~~~el~~~v 612 (903)
T PRK15122 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIEAMDDAALAREV 612 (903)
T ss_pred cCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhhhCCHHHHHHHh
Confidence 89999999999 9999999999999999999999999999999999999963 468999999999999999999
Q ss_pred ccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
+++.+|||++|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+||++||+++. +|+.|+++++
T Consensus 613 ~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGD-GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 613 EERTVFAKLTPLQKSRVLKALQANGHTVGFLGD-GINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred hhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECC-CchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999 799999999999999 9999999999
Q ss_pred ccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCc
Q 044228 442 LGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSL 521 (703)
Q Consensus 442 ~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l 521 (703)
+||++|+|+++++.|.+..|+..+...+++.++..+.|+++.|++|+|+++|. |++++++|+|++++| +||++++.++
T Consensus 691 ~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~ 768 (903)
T PRK15122 691 KGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKN 768 (903)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhh
Confidence 99999999999999999999988887777767666689999999999999995 999999999999999 9999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccc--ccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHH
Q 044228 522 LDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNR--DIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVV 599 (703)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 599 (703)
+++.+++..+..+++.....++ +++.... +... ...+|..|..++++|+++.+++|+.+ .++| +|++.+..
T Consensus 769 ~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~-~~~~----~~~~~~~~ 841 (903)
T PRK15122 769 IGRFMLWIGPTSSIFDITTFAL-MWFVFAA-NSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK-IPFI----QSTAALPV 841 (903)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHhcc-CcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC-CCcC----cchHHHHH
Confidence 9997775444433333322222 2221111 1101 12457789999999999999999842 2444 35555555
Q ss_pred HHHHHHHHHHH--HHH--HhhccccccCChhHHHHHHHHHHHHHHHHHHHHHH
Q 044228 600 FVIVIAVQVLV--VEF--ATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFI 648 (703)
Q Consensus 600 ~~~~~~~~~~~--~~~--~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i 648 (703)
++++++++++. +++ ++.+|++.++++.+|++++.+++..+++.++.|.+
T Consensus 842 ~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 894 (903)
T PRK15122 842 LLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRF 894 (903)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555543 344 68899999999999999999999988888888844
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-87 Score=791.95 Aligned_cols=555 Identities=18% Similarity=0.219 Sum_probs=454.4
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.|+++| +|+|++||+++++|++|++|+||||||||||+|+|++.++...
T Consensus 317 ~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m-ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~ 395 (902)
T PRK10517 317 DWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL-SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI 395 (902)
T ss_pred CHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH-HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC
Confidence 567889999999999999999999999999999999 9999999999999999999999999999999999999987421
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCC-ccccccceEEEecCCCCCCeEEEEEEeC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSL-NVDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~-~~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
.. . .++++++. +.+++.. +...+||+|.|+++++++.+. ...+.++.++++||+|++|+|+++++..
T Consensus 396 ~~---~-----~~~~ll~~---a~l~~~~-~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~ 463 (902)
T PRK10517 396 SG---K-----TSERVLHS---AWLNSHY-QTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAEN 463 (902)
T ss_pred CC---C-----CHHHHHHH---HHhcCCc-CCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEEC
Confidence 11 0 01233332 2222211 234799999999999875432 3345678899999999999999999876
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCcc-----cccccC
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-----EIKENG 289 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~-----~~~e~~ 289 (703)
++. +.+++|||||.++++|+++.. +|...++ ++.++++.+..++++++|+|++++|||+++.. ...|+|
T Consensus 464 ~~~----~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~ 538 (902)
T PRK10517 464 TEH----HQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESD 538 (902)
T ss_pred CCe----EEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccC
Confidence 655 779999999999999998754 5667788 78888999999999999999999999987521 124789
Q ss_pred cEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhcc
Q 044228 290 LHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDS 365 (703)
Q Consensus 290 l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~ 365 (703)
++|+|++++ |||++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|+++++++++++.+.+++
T Consensus 539 l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~~l~~~el~~~~~~ 614 (902)
T PRK10517 539 LILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDIETLSDDELANLAER 614 (902)
T ss_pred ceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHHhCCHHHHHHHHhh
Confidence 999999999 9999999999999999999999999999999999999953 47899999999999999999999
Q ss_pred CceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhcc
Q 044228 366 MTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLG 443 (703)
Q Consensus 366 ~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~g 443 (703)
+.+|||++|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+|+++||+++. +|..|++++++|
T Consensus 615 ~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GD-GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~g 692 (902)
T PRK10517 615 TTLFARLTPMHKERIVTLLKREGHVVGFMGD-GINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEG 692 (902)
T ss_pred CcEEEEcCHHHHHHHHHHHHHCCCEEEEECC-CcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999 799999999999999 999999999999
Q ss_pred chhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccC
Q 044228 444 RCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLD 523 (703)
Q Consensus 444 R~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~ 523 (703)
|++|+||+|++.|.+..|+..++..+++.++..+.|+++.|++|+|+++| +|++++++|+|++++|++||+ ++...+.
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~ 770 (902)
T PRK10517 693 RRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLG 770 (902)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHH
Confidence 99999999999999999999988888777665558999999999999999 789999999999999999887 3332233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc-c---ccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHH
Q 044228 524 KVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMN-R---DIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVV 599 (703)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 599 (703)
+ .++..|.+.+++.+..++.....++.. . ...++..|..++++|+++.+++|+.+ .+ +|+|++.+..
T Consensus 771 ~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~-~~----~~~~~~~~~~ 841 (902)
T PRK10517 771 R----FMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR-IP----FIQSRAAWPL 841 (902)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC-CC----cccchHHHHH
Confidence 3 334444444333333222211111211 1 12345569999999999999999832 23 4456666666
Q ss_pred HHHHHHHHHHH--HH--HHhhccccccCC--hhHHHHHHHHHHHHHHHHHHHHHH
Q 044228 600 FVIVIAVQVLV--VE--FATSLAGYQRLN--GMHWGICFILAVLPWGIHCAVNFI 648 (703)
Q Consensus 600 ~~~~~~~~~~~--~~--~~~~~f~~~~l~--~~~wl~~l~~~~~~ll~~~~~k~i 648 (703)
++.+++++++. ++ .++.+|++.+++ +..|++++.++.. +..++.|..
T Consensus 842 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~ 894 (902)
T PRK10517 842 MIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGF 894 (902)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHH
Confidence 66666665543 34 568899999999 5667666665555 556666654
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-87 Score=788.91 Aligned_cols=555 Identities=18% Similarity=0.233 Sum_probs=455.8
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.|+++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 282 ~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m-ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~ 360 (867)
T TIGR01524 282 DWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM-SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDS 360 (867)
T ss_pred CHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH-HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecC
Confidence 567899999999999999999999999999999999 9999999999999999999999999999999999999997532
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCC-ccccccceEEEecCCCCCCeEEEEEEeC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSL-NVDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~-~~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
+.. ..+++++. +.+++-. +..++||+|.|+++++.+... ..+..++..+.+||+|++|+|+++++.+
T Consensus 361 ~~~--------~~~~~l~~---a~l~~~~-~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~ 428 (867)
T TIGR01524 361 SGE--------TSERVLKM---AWLNSYF-QTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENR 428 (867)
T ss_pred CCC--------CHHHHHHH---HHHhCCC-CCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcC
Confidence 210 01233332 2222211 234689999999999875432 2234678889999999999999998865
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCcc-----cccccC
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-----EIKENG 289 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~-----~~~e~~ 289 (703)
++. +++++|||||.++++|+++.. +|...++ ++.++++++..++++++|+|++++|||+++.. ++.|++
T Consensus 429 ~~~----~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~ 503 (867)
T TIGR01524 429 AEV----TRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQ 503 (867)
T ss_pred Cce----EEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCC
Confidence 554 779999999999999997754 6777778 77788999999999999999999999987521 124789
Q ss_pred cEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhcc
Q 044228 290 LHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDS 365 (703)
Q Consensus 290 l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~ 365 (703)
|+|+|++++ |+|++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|.+++.++++++.+.+.+
T Consensus 504 l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v~~g~~l~~~~~~el~~~~~~ 579 (867)
T TIGR01524 504 LIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDFLLGADIEELSDEELARELRK 579 (867)
T ss_pred cEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCeeecHhhhhCCHHHHHHHhhh
Confidence 999999999 9999999999999999999999999999999999999964 36899999999999999999999
Q ss_pred CceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhcc
Q 044228 366 MTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLG 443 (703)
Q Consensus 366 ~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~g 443 (703)
+.+|||++|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+|+++||+++. +|+.+++++++|
T Consensus 580 ~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GD-GvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~g 657 (867)
T TIGR01524 580 YHIFARLTPMQKSRIIGLLKKAGHTVGFLGD-GINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEG 657 (867)
T ss_pred CeEEEECCHHHHHHHHHHHHhCCCEEEEECC-CcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999 799999999999999 999999999999
Q ss_pred chhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccC
Q 044228 444 RCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLD 523 (703)
Q Consensus 444 R~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~ 523 (703)
|++|+|+++++.|.+..|+..++..+++.++..+.|+++.|++|+|+++| +|++++++|+|++++|++||+ ++.+.+.
T Consensus 658 R~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~ 735 (867)
T TIGR01524 658 RNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMG 735 (867)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHH
Confidence 99999999999999999999988888777766668999999999999999 799999999999999986655 6664433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---hcccCCc-ccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHH
Q 044228 524 KVMWKHAAVQVLCQVVVLLIFQFA---GQVIPGM-NRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVV 599 (703)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 599 (703)
+. ++..|++.++..+..++. .....+. .....+|..|..++++|+++.+++|+.+ . ++|+|++.+.+
T Consensus 736 ~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~-~----~~~~n~~~~~~ 806 (867)
T TIGR01524 736 RF----MLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEK-I----PFIQSRAAAPV 806 (867)
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCC-C----CcCcchHHHHH
Confidence 33 333444433333222211 1110010 0122467889999999999999999832 2 34457888888
Q ss_pred HHHHHHHHHHHHH--H--HhhccccccCCh--hHHHHHHHHHHHHHHHHHHHHHH
Q 044228 600 FVIVIAVQVLVVE--F--ATSLAGYQRLNG--MHWGICFILAVLPWGIHCAVNFI 648 (703)
Q Consensus 600 ~~~~~~~~~~~~~--~--~~~~f~~~~l~~--~~wl~~l~~~~~~ll~~~~~k~i 648 (703)
++++++++++.++ + ++.+|++.++++ ..|++++.++.. +..++.|.+
T Consensus 807 ~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~ 859 (867)
T TIGR01524 807 MIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTF 859 (867)
T ss_pred HHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHH
Confidence 8888877766553 3 378999998854 456666655554 556666644
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-84 Score=785.81 Aligned_cols=542 Identities=16% Similarity=0.186 Sum_probs=451.1
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++...+.+++++++++||||||++++++++.|++|| +|+|++||+++++|.+|++|++|||||||||+|+|+|.+++..
T Consensus 394 ~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL-~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~ 472 (1054)
T TIGR01657 394 PLGKIILRSLDIITIVVPPALPAELSIGINNSLARL-KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGL 472 (1054)
T ss_pred cHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH-HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecc
Confidence 678899999999999999999999999999999999 9999999999999999999999999999999999999999875
Q ss_pred CeecCCC-----CcccccHHHHHHHHHHhccccc--CCcccCChHHHHHHHHHHhC----C---Ccc-----------cc
Q 044228 137 EKDVNND-----VASEINQAVLQALERGIGASVL--VPEISVWPTTDWLVSWAKSR----S---LNV-----------DQ 191 (703)
Q Consensus 137 ~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~p~e~Al~~~~~~~----~---~~~-----------~~ 191 (703)
+.....+ ........... ..+.||++. +++..|||+|.|+++++... + ... ..
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~--~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 550 (1054)
T TIGR01657 473 SGNQEFLKIVTEDSSLKPSITHK--ALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQ 550 (1054)
T ss_pred cCccccccccccccccCchHHHH--HHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCc
Confidence 5321110 00011112222 334565543 44678999999999986411 0 000 24
Q ss_pred ccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCc
Q 044228 192 NLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLR 271 (703)
Q Consensus 192 ~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r 271 (703)
++++++++||+|++|||||+++.+++++ +++|+|||||.|+++|++. +.++++.+.+++++++|+|
T Consensus 551 ~~~il~~~pF~S~~krMsvvv~~~~~~~---~~~~~KGApE~Il~~c~~~-----------~~p~~~~~~~~~~a~~G~R 616 (1054)
T TIGR01657 551 ELSIIRRFQFSSALQRMSVIVSTNDERS---PDAFVKGAPETIQSLCSPE-----------TVPSDYQEVLKSYTREGYR 616 (1054)
T ss_pred eEEEEEEEeecCCCCEEEEEEEEcCCCe---EEEEEECCHHHHHHHcCCc-----------CCChhHHHHHHHHHhcCCE
Confidence 6788999999999999999999865443 8899999999999999852 2357888999999999999
Q ss_pred eEEEEEeecC----------cccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 272 PIAFACGQTE----------VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 272 ~l~~A~~~l~----------~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
|+++|||+++ .+++.|+||+|+|++++ |++++++|++|+++||+++|+||||+.||.++|++|||.
T Consensus 617 VLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 617 VLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred EEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 9999999985 24667999999999999 999999999999999999999999999999999999997
Q ss_pred CCCC---------------------------------------------------Cceeeechhhhc---cCHHHHHHhh
Q 044228 338 RPES---------------------------------------------------NDIALEGEQFRE---LNSTERMAKL 363 (703)
Q Consensus 338 ~~~~---------------------------------------------------~~~vi~g~~l~~---~~~~~~~~~~ 363 (703)
+++. ..++++|++++. +.++++.+.+
T Consensus 697 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~ 776 (1054)
T TIGR01657 697 NPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLL 776 (1054)
T ss_pred CCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHH
Confidence 5421 136899999876 4567899999
Q ss_pred ccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.++.||||++|+||.++|+.+|+.|++|+|+|| |+||+||||+||||||||+ +|++ .+||+++. +|++++++|+
T Consensus 777 ~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GD-G~ND~~ALK~AdVGIam~~--~das-~AA~f~l~~~~~~~I~~~I~ 852 (1054)
T TIGR01657 777 SHTTVFARMAPDQKETLVELLQKLDYTVGMCGD-GANDCGALKQADVGISLSE--AEAS-VAAPFTSKLASISCVPNVIR 852 (1054)
T ss_pred hcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeC-ChHHHHHHHhcCcceeecc--ccce-eecccccCCCcHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999999999983 3555 78999998 9999999999
Q ss_pred ccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCc
Q 044228 442 LGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSL 521 (703)
Q Consensus 442 ~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l 521 (703)
+||+++.++++.++|.+.++++.....++ ++..+.|++++|++|+|++++.+++++++.++|++++|++||. .++
T Consensus 853 eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~---~~l 927 (1054)
T TIGR01657 853 EGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP---SNL 927 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---ccc
Confidence 99999999999999999999988665443 3345689999999999999999999999999999999999995 499
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhcc--cC----C--c----ccccccchhhHHHHHHHHHHhhheeeccccccccc
Q 044228 522 LDKVMWKHAAVQVLCQVVVLLIFQFAGQV--IP----G--M----NRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPV 589 (703)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~--~----~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~ 589 (703)
+++.++.++++|+++++++.+..++.... ++ . . .+...+|++|....+.++.. +.+++. +.||.++
T Consensus 928 ~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~~~~~~-~~~~~~-g~pf~~~ 1005 (1054)
T TIGR01657 928 FSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLIT-AIVNSK-GPPFREP 1005 (1054)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHHHHHHh-eEEEcC-Ccchhhh
Confidence 99999999999999999988887765432 11 0 0 12344699996666665555 444443 7889999
Q ss_pred ccchHHHHHHHHHHHHHHHH----HHHHHhhccccccCChh
Q 044228 590 VLKKINFLVVFVIVIAVQVL----VVEFATSLAGYQRLNGM 626 (703)
Q Consensus 590 ~~~n~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~l~~~ 626 (703)
+++|+++++++++++++++. .++.++.+|++.+++..
T Consensus 1006 ~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1046 (1054)
T TIGR01657 1006 IYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQE 1046 (1054)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCHH
Confidence 99999998888877666553 24678999999998863
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-81 Score=761.95 Aligned_cols=579 Identities=15% Similarity=0.149 Sum_probs=465.2
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHH------HHHhhhc----CCccccCccccccCCceeeecccccccccC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWK------EKLLINH----HAKPQNLSAGATMGIASVICIDVTGGLLCN 126 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~------~~l~~k~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n 126 (703)
.+...+..++.++..++|++|++.++++...+. .+| .++ ++.||+.+++|+||+|++||+|||||||+|
T Consensus 295 ~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m-~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N 373 (1057)
T TIGR01652 295 NGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQM-YHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQN 373 (1057)
T ss_pred HHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhh-hccccCCcceeecCCChHHhcCeeEEEEcCCCceeee
Confidence 456678899999999999999999999999999 788 764 599999999999999999999999999999
Q ss_pred ceEEEEEEECCeecCCCCc----------c-------------------------------cccHHHHHH-HHHHhcccc
Q 044228 127 RVDVSKFCIGEKDVNNDVA----------S-------------------------------EINQAVLQA-LERGIGASV 164 (703)
Q Consensus 127 ~m~v~~~~~~~~~~~~~~~----------~-------------------------------~~~~~~~~~-l~~~~~~~~ 164 (703)
+|+++++++++..|..+.. . ...+...++ ...++||++
T Consensus 374 ~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v 453 (1057)
T TIGR01652 374 IMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTV 453 (1057)
T ss_pred eEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcc
Confidence 9999999998876642100 0 001112333 345567766
Q ss_pred cCC----------cccCChHHHHHHHHHHhCCCc-----------------cccccceEEEecCCCCCCeEEEEEEeCCC
Q 044228 165 LVP----------EISVWPTTDWLVSWAKSRSLN-----------------VDQNLSIVQYRKLSSHNKVCGVLMKINGG 217 (703)
Q Consensus 165 ~~~----------~~~~~p~e~Al~~~~~~~~~~-----------------~~~~~~~l~~~~F~s~~k~msviv~~~~~ 217 (703)
..+ +.++||+|.|++++|++.|+. ...+|++++++||+|+||||||+++.+++
T Consensus 454 ~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~ 533 (1057)
T TIGR01652 454 VPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG 533 (1057)
T ss_pred cccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC
Confidence 421 236899999999999998871 22468899999999999999999998776
Q ss_pred CcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCc---------------
Q 044228 218 DEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV--------------- 282 (703)
Q Consensus 218 ~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~--------------- 282 (703)
+ +.+|+|||||.|+++|+.. + ++.++++.+++++++++|+||+++|+|.++.
T Consensus 534 ~----~~l~~KGA~e~il~~~~~~----~-----~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~ 600 (1057)
T TIGR01652 534 R----IKLLCKGADTVIFKRLSSG----G-----NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEAST 600 (1057)
T ss_pred e----EEEEEeCcHHHHHHHhhcc----c-----hhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 5 8999999999999999751 0 2346788899999999999999999999862
Q ss_pred ------------ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC----
Q 044228 283 ------------SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN---- 342 (703)
Q Consensus 283 ------------~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---- 342 (703)
.+++|+||+|+|++++ |+|++++|+.|++|||++||+|||+.+||.+||++||+..++..
T Consensus 601 ~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i 680 (1057)
T TIGR01652 601 ALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVI 680 (1057)
T ss_pred hhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEE
Confidence 1346899999999999 99999999999999999999999999999999999999875321
Q ss_pred -----------------------------------ceeeechhhhccCHH----HHHHhhccCc--eEEEeChhhHHHHH
Q 044228 343 -----------------------------------DIALEGEQFRELNST----ERMAKLDSMT--LMGSCLAADKLLLV 381 (703)
Q Consensus 343 -----------------------------------~~vi~g~~l~~~~~~----~~~~~~~~~~--v~~r~~P~~K~~iv 381 (703)
.++++|++++.+.++ ++.+++.+++ ||||++|+||+++|
T Consensus 681 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV 760 (1057)
T TIGR01652 681 TSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVV 760 (1057)
T ss_pred ecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHH
Confidence 258899988865543 4566677776 99999999999999
Q ss_pred HHHHhC-CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHH-hccchhhhchhhhhhHHhh
Q 044228 382 QTAKEK-GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPIL-KLGRCAYCNIQKFTKLQLT 459 (703)
Q Consensus 382 ~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i-~~gR~~~~~i~~~~~~~l~ 459 (703)
+.+|+. |++|+|+|| |+||+|||++|||||++.+.+..+|+.+||+++.+|+.+.+++ .|||++|+|+++.+.|.++
T Consensus 761 ~~lk~~~~~~vl~iGD-G~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~ 839 (1057)
T TIGR01652 761 RLVKKSTGKTTLAIGD-GANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFY 839 (1057)
T ss_pred HHHHhcCCCeEEEEeC-CCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 999998 999999999 9999999999999999754454468889999999999999998 6899999999999999999
Q ss_pred hhhHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHHHhhhc--cCCCCCCCCCCCC----CCCCCccCHHHHHHH
Q 044228 460 GCASGLLITLVTTLILE---ESPITSIQLIWVYCIMYILGGLMMRM--EFKDQEPVTNPPA----RRTKSLLDKVMWKHA 530 (703)
Q Consensus 460 ~n~~~~~~~~~~~~~~~---~~pl~~~~~l~~~~~~~~l~~l~l~~--~~~~~~~~~~~P~----~~~~~l~~~~~~~~~ 530 (703)
+|++.+++++++.++.+ .+++++++++|+|++++++|+++++. .+++++.|.++|+ .+++++++.+.|+.|
T Consensus 840 kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~ 919 (1057)
T TIGR01652 840 KNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGW 919 (1057)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHH
Confidence 99999999999888765 45789999999999999999999975 3457788999998 577889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCC-------cccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHHHH
Q 044228 531 AVQVLCQVVVLLIFQFAGQVIPG-------MNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIV 603 (703)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~ 603 (703)
++.+++|+++++++.+....... .+....++..|+++++...+.++.. ...++++.+++++++
T Consensus 920 ~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~wt~~~~~~~~~S 989 (1057)
T TIGR01652 920 MLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALE----------INRWNWISLITIWGS 989 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHH----------HhHhHHHHHHHHHHH
Confidence 99999999998877655432211 1123344455555544444433221 112345566667777
Q ss_pred HHHHHHHHHHHhhcc---------ccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhh
Q 044228 604 IAVQVLVVEFATSLA---------GYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLDWSLSGI 660 (703)
Q Consensus 604 ~~~~~~~~~~~~~~f---------~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~~~~~~~ 660 (703)
+++++++...+...+ ...-.++.+|+.+++..+++++++.++|.+.+.+.|...+..
T Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i 1055 (1057)
T TIGR01652 990 ILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIV 1055 (1057)
T ss_pred HHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHh
Confidence 777665544433222 112236889999999999999999999999999988665543
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-85 Score=711.74 Aligned_cols=594 Identities=17% Similarity=0.246 Sum_probs=518.6
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
.++..++.+.+.++++.+|+||+..++.+++...+|| +++++++|++++.|+||+.++||+|||||||+|+|+|.++|.
T Consensus 311 y~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM-a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~ 389 (1019)
T KOG0203|consen 311 YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM-ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWF 389 (1019)
T ss_pred chhHHHhhhhheeEEecCcCCccceehhhHHHHHHHH-hhceeEEeeeeheeecccceeEeecceeeEEecceEEEeecc
Confidence 4888999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCc--------ccccHHHHHHHHHH-hccccc-----------CCcccCChHHHHHHHHHHhC-CC--ccccc
Q 044228 136 GEKDVNNDVA--------SEINQAVLQALERG-IGASVL-----------VPEISVWPTTDWLVSWAKSR-SL--NVDQN 192 (703)
Q Consensus 136 ~~~~~~~~~~--------~~~~~~~~~~l~~~-~~~~~~-----------~~~~~~~p~e~Al~~~~~~~-~~--~~~~~ 192 (703)
++.....+.. ...++...+++..+ .|+... .....|++.|.||++++... +- ..++.
T Consensus 390 d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~ 469 (1019)
T KOG0203|consen 390 DNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRER 469 (1019)
T ss_pred CCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHh
Confidence 8865443321 11122333333332 343322 23458999999999999832 22 56788
Q ss_pred cceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCc
Q 044228 193 LSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLR 271 (703)
Q Consensus 193 ~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r 271 (703)
++.+..+||+|.+|..-.+.+.++. .++++.+.+|||||.++++|+.+.. +|++.|+ ++.++.+++...++...|-|
T Consensus 470 ~~kv~eipfNSt~Kyqlsih~~~d~-~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~Ger 547 (1019)
T KOG0203|consen 470 NPKVAEIPFNSTNKYQLSIHETEDP-SDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGER 547 (1019)
T ss_pred hHHhhcCCcccccceEEEEEecCCC-CCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchH
Confidence 8999999999999998888876552 2234889999999999999999877 7999999 99999999999999999999
Q ss_pred eEEEEEeecC-------------cccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Q 044228 272 PIAFACGQTE-------------VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 334 (703)
Q Consensus 272 ~l~~A~~~l~-------------~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~ 334 (703)
|++++++.++ .-+..-+++.|+|++++ |..+|+++..||.||||++|+|||++.||+++|++.
T Consensus 548 VlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~v 627 (1019)
T KOG0203|consen 548 VLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSV 627 (1019)
T ss_pred HHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhhe
Confidence 9999999887 23344678999999999 999999999999999999999999999999999999
Q ss_pred CCCCCC----------------------CCceeeechhhhccCHHHHHHhhccCc--eEEEeChhhHHHHHHHHHhCCCE
Q 044228 335 GNFRPE----------------------SNDIALEGEQFRELNSTERMAKLDSMT--LMGSCLAADKLLLVQTAKEKGHV 390 (703)
Q Consensus 335 gi~~~~----------------------~~~~vi~g~~l~~~~~~~~~~~~~~~~--v~~r~~P~~K~~iv~~lq~~g~~ 390 (703)
||.... ....|++|.++.+++.+++++++.+.. ||||.||+||..||+..|+.|.+
T Consensus 628 gIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~Gai 707 (1019)
T KOG0203|consen 628 GIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAI 707 (1019)
T ss_pred eeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcE
Confidence 977641 256899999999999999999998876 99999999999999999999999
Q ss_pred EEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHH
Q 044228 391 VAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLIT 468 (703)
Q Consensus 391 v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~ 468 (703)
|+++|| |+||+||||.||||||||..|+|++|+|||++++ ||++|+..+++||.+++|+||.+.|.++.|+..+...
T Consensus 708 VaVTGD-GVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~Pf 786 (1019)
T KOG0203|consen 708 VAVTGD-GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 786 (1019)
T ss_pred EEEeCC-CcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHH
Confidence 999999 9999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC-CCCCccCHHHHHHHHHH-HHHHHHHHHHHHH
Q 044228 469 LVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPAR-RTKSLLDKVMWKHAAVQ-VLCQVVVLLIFQF 546 (703)
Q Consensus 469 ~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~-~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 546 (703)
+++.+++.|.|+..+++|.+++..|++|++++++|+|++++|+|+|++ ++++++|.+++....+| |++|++..|+.||
T Consensus 787 L~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYF 866 (1019)
T KOG0203|consen 787 LLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYF 866 (1019)
T ss_pred HHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 78899999987665554 8999999998886
Q ss_pred hhcccCCcc-----------------------------------cccccchhhHHHHHHHHHHhhheeeccccccccccc
Q 044228 547 AGQVIPGMN-----------------------------------RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVL 591 (703)
Q Consensus 547 ~~~~~~~~~-----------------------------------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~ 591 (703)
..+..-|.- ..+.+|.+|.+++.+|.+..+.+++. +.+.|+...
T Consensus 867 vima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTR-RnSlfqqGm 945 (1019)
T KOG0203|consen 867 VIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTR-RNSIFQQGM 945 (1019)
T ss_pred HHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcc-hhHHHHhhh
Confidence 544221110 34578999999999999999999984 456777668
Q ss_pred chHHHHHHHHHHHHHHHHH--HHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044228 592 KKINFLVVFVIVIAVQVLV--VEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLD 654 (703)
Q Consensus 592 ~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~ 654 (703)
+||.++++++..+++..++ ++.....++..++.+.+|+..+.++++.++.+++.|++.|.+..
T Consensus 946 rN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~ 1010 (1019)
T KOG0203|consen 946 RNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPG 1010 (1019)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCC
Confidence 9999988888776665544 45677889999999999999999999999999999999998843
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-80 Score=742.56 Aligned_cols=580 Identities=13% Similarity=0.133 Sum_probs=456.9
Q ss_pred HHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcC----------CccccCccccccCCceeeecccccccccCceE
Q 044228 60 SILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHH----------AKPQNLSAGATMGIASVICIDVTGGLLCNRVD 129 (703)
Q Consensus 60 ~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~ 129 (703)
..+...+.++...+|.+|++.+.++.......+ .++. +.||+.+.+|+||+|++||+|||||||+|+|+
T Consensus 392 ~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I-~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~ 470 (1178)
T PLN03190 392 FTFLMSVIVFQIMIPISLYISMELVRVGQAYFM-IRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 470 (1178)
T ss_pred HHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHH-HhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEE
Confidence 344455667779999999999999997767777 6654 78999999999999999999999999999999
Q ss_pred EEEEEECCeecCCCC---------------c-------c-------------c-c---cHHHHH-HHHHHhcccccC---
Q 044228 130 VSKFCIGEKDVNNDV---------------A-------S-------------E-I---NQAVLQ-ALERGIGASVLV--- 166 (703)
Q Consensus 130 v~~~~~~~~~~~~~~---------------~-------~-------------~-~---~~~~~~-~l~~~~~~~~~~--- 166 (703)
|++|++++..|+.+. . . . . .+.+.+ ++..++||++..
T Consensus 471 fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~ 550 (1178)
T PLN03190 471 FQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVV 550 (1178)
T ss_pred EEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeecc
Confidence 999999876664210 0 0 0 0 011222 334567777642
Q ss_pred -C----------cccCChHHHHHHHHHHhCCC---------------ccccccceEEEecCCCCCCeEEEEEEeCCCCcc
Q 044228 167 -P----------EISVWPTTDWLVSWAKSRSL---------------NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDED 220 (703)
Q Consensus 167 -~----------~~~~~p~e~Al~~~~~~~~~---------------~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~ 220 (703)
+ +.++||+|.||+++|++.|+ +.+.+|++++++||+|+||||||+++.++++
T Consensus 551 ~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~-- 628 (1178)
T PLN03190 551 DDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKT-- 628 (1178)
T ss_pred CCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCc--
Confidence 1 44669999999999999986 3456899999999999999999999987765
Q ss_pred eeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCc------------------
Q 044228 221 KIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV------------------ 282 (703)
Q Consensus 221 ~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~------------------ 282 (703)
+.+|+|||||.|+++|+...+ ++.++++.+++++|+++|+|||++|||.++.
T Consensus 629 --~~l~~KGA~e~il~~~~~~~~--------~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~ 698 (1178)
T PLN03190 629 --VKVFVKGADTSMFSVIDRSLN--------MNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALI 698 (1178)
T ss_pred --EEEEEecCcHHHHHhhccccc--------chhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhh
Confidence 899999999999999986432 3346788899999999999999999999861
Q ss_pred ---------ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--------
Q 044228 283 ---------SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES-------- 341 (703)
Q Consensus 283 ---------~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~-------- 341 (703)
.+++|+||+++|++++ |++++++|+.|+++||++||+|||+.+||.+||++||+.+++.
T Consensus 699 ~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~ 778 (1178)
T PLN03190 699 GRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSN 778 (1178)
T ss_pred hhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCC
Confidence 1357899999999999 9999999999999999999999999999999999999976521
Q ss_pred ---------------------------------------CceeeechhhhccCH----HHHHHhhccCc--eEEEeChhh
Q 044228 342 ---------------------------------------NDIALEGEQFRELNS----TERMAKLDSMT--LMGSCLAAD 376 (703)
Q Consensus 342 ---------------------------------------~~~vi~g~~l~~~~~----~~~~~~~~~~~--v~~r~~P~~ 376 (703)
..++++|++++.+.+ +++.++..+++ ||||++|+|
T Consensus 779 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~Q 858 (1178)
T PLN03190 779 SKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQ 858 (1178)
T ss_pred chhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHH
Confidence 137889999887764 56777777777 799999999
Q ss_pred HHHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHHh-ccchhhhchhhhh
Q 044228 377 KLLLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPILK-LGRCAYCNIQKFT 454 (703)
Q Consensus 377 K~~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~-~gR~~~~~i~~~~ 454 (703)
|+++|+.+|+. +++|+|+|| |+||++|||+|||||++.+.+..+|..+|||++.+|+.+.+++. |||++|+|+.+.+
T Consensus 859 Ka~IV~~vk~~~~~vtlaIGD-GaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 859 KAGIVALVKNRTSDMTLAIGD-GANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred HHHHHHHHHhcCCcEEEEECC-CcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHH
Confidence 99999999997 589999999 99999999999999997655666777899999999999999998 9999999999999
Q ss_pred hHHhhhhhHHHHHHHHHHHhcCC---CchhHHHHHHHHHHHHHHHHHhhhc-cCC-CCCCCCCCCC----CCCCCccCHH
Q 044228 455 KLQLTGCASGLLITLVTTLILEE---SPITSIQLIWVYCIMYILGGLMMRM-EFK-DQEPVTNPPA----RRTKSLLDKV 525 (703)
Q Consensus 455 ~~~l~~n~~~~~~~~~~~~~~~~---~pl~~~~~l~~~~~~~~l~~l~l~~-~~~-~~~~~~~~P~----~~~~~l~~~~ 525 (703)
.|.|++|++.+++++++.++.+. ..++++.+.++|+++|++|.++++. |+. +++.+.+.|. ++++..++.+
T Consensus 938 ~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~ 1017 (1178)
T PLN03190 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK 1017 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH
Confidence 99999999999999999988874 4468899999999999999999965 443 3334444454 3577899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHHHHHH
Q 044228 526 MWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIA 605 (703)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~ 605 (703)
.|+.|++.|++|++++|++.++.......+.....++++.+.++...+.+.. ....++|+.+++++++++
T Consensus 1018 ~F~~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~----------~~~~wt~~~~~~i~~Si~ 1087 (1178)
T PLN03190 1018 LFWLTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAM----------DIIRWNWITHAAIWGSIV 1087 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHH----------HHhhhhHHHHHHHHHHHH
Confidence 9999999999999999887665443222223333444444444433333221 111224444555556665
Q ss_pred HHHHHHHHHhh------c--cccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhHHH
Q 044228 606 VQVLVVEFATS------L--AGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLDWSLSGILRL 663 (703)
Q Consensus 606 ~~~~~~~~~~~------~--f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~~~~~~~~~~ 663 (703)
+++++...++. + +.....++.+|+.++++.+++++++.++|.+.+.+.|...+..++.
T Consensus 1088 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~ 1153 (1178)
T PLN03190 1088 ATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREA 1153 (1178)
T ss_pred HHHHHHHHHHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 55544322211 1 1111236889999999999999999999999999998887766553
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-79 Score=714.39 Aligned_cols=504 Identities=19% Similarity=0.251 Sum_probs=418.4
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++|||+||+++|++++.|+++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 232 ~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~-ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 310 (755)
T TIGR01647 232 SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAEL-AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPF 310 (755)
T ss_pred CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHH-HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEec
Confidence 678899999999999999999999999999999999 9999999999999999999999999999999999999999875
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+..++. ++++.....+ + +..++||+|.|+++++++.+ ..+..++..+..||++.+|+|+++++.++
T Consensus 311 ~~~~~~-------~~~l~~a~~~---~---~~~~~~pi~~Ai~~~~~~~~-~~~~~~~~~~~~pf~~~~k~~~~~v~~~~ 376 (755)
T TIGR01647 311 FNGFDK-------DDVLLYAALA---S---REEDQDAIDTAVLGSAKDLK-EARDGYKVLEFVPFDPVDKRTEATVEDPE 376 (755)
T ss_pred CCCCCH-------HHHHHHHHHh---C---CCCCCChHHHHHHHHHHHhH-HHHhcCceEEEeccCCCCCeEEEEEEeCC
Confidence 432211 1333332221 1 35688999999999987644 22345788899999999999999988654
Q ss_pred -CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEE
Q 044228 217 -GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLAL 295 (703)
Q Consensus 217 -~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~ 295 (703)
|+ .++++|||||.++++|+.. ++.++++++.+++++++|+|++++|+++ .|++|+|+|+
T Consensus 377 ~g~----~~~~~kGa~e~il~~c~~~----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~------~e~~l~~~Gl 436 (755)
T TIGR01647 377 TGK----RFKVTKGAPQVILDLCDNK----------KEIEEKVEEKVDELASRGYRALGVARTD------EEGRWHFLGL 436 (755)
T ss_pred Cce----EEEEEeCChHHHHHhcCCc----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc------CCCCcEEEEE
Confidence 44 6688999999999999753 3446778888999999999999999974 3789999999
Q ss_pred Eee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-CCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 296 AGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-SNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 296 ~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
+++ |||++++|++||++||+++|+|||++.||.++|+++||..+. ....+.+|++.+.++++++.+.+.++.+||
T Consensus 437 i~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA 516 (755)
T TIGR01647 437 LPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFA 516 (755)
T ss_pred eeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE
Confidence 999 999999999999999999999999999999999999997521 122344555667888999999999999999
Q ss_pred EeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhh
Q 044228 371 SCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYC 448 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~ 448 (703)
|++|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+|+++||+++. +|+.+.+++++||++|+
T Consensus 517 r~~Pe~K~~iV~~lq~~G~~VamvGD-GvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ 594 (755)
T TIGR01647 517 EVFPEHKYEIVEILQKRGHLVGMTGD-GVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQ 594 (755)
T ss_pred ecCHHHHHHHHHHHHhcCCEEEEEcC-CcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 999999999999999999 799999999999999 99999999999999999
Q ss_pred chhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHH
Q 044228 449 NIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWK 528 (703)
Q Consensus 449 ~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~ 528 (703)
|+++++.|.+..|+..++..+++.+..+ .|++++|++|+|+++|. +++++++|++++. ++|..+. + ..++.
T Consensus 595 ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~~~---~-~~~~~ 665 (755)
T TIGR01647 595 RMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQRWN---L-REVFT 665 (755)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCccc---h-HHHHH
Confidence 9999999999999998877776655443 45999999999999995 6999999998742 4444332 3 46677
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc------cCC--cccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHH
Q 044228 529 HAAVQVLCQVVVLLIFQFAGQV------IPG--MNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVF 600 (703)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~ 600 (703)
.++..|.+.++..+.++++... ..+ ....+.+|++|..++++|.++.+++|+ ...+|+. +.+++++++.
T Consensus 666 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~--~~~~~~~-~p~~~l~~~~ 742 (755)
T TIGR01647 666 MSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRT--HGFFWSE-RPGKLLFIAF 742 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheecc--CCCCccc-CCcHHHHHHH
Confidence 7777888888776666654432 111 123467899999999999999999998 4444543 3566666666
Q ss_pred HHHHHHHHH
Q 044228 601 VIVIAVQVL 609 (703)
Q Consensus 601 ~~~~~~~~~ 609 (703)
++.+++..+
T Consensus 743 ~~~~~~~~~ 751 (755)
T TIGR01647 743 VIAQIIATF 751 (755)
T ss_pred HHHHHHHHH
Confidence 555554443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-78 Score=705.42 Aligned_cols=589 Identities=14% Similarity=0.144 Sum_probs=478.8
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhh----------hcCCccccCccccccCCceeeecccccccccC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLI----------NHHAKPQNLSAGATMGIASVICIDVTGGLLCN 126 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~----------k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n 126 (703)
.....++.++.+....+|.+|...+.+.-...+.-. . +..+.+|+.+..|+||+|++|++|||||||+|
T Consensus 323 ~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi-~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N 401 (1151)
T KOG0206|consen 323 AGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFI-NNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQN 401 (1151)
T ss_pred HHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHc-chHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccc
Confidence 456678888889999999999998888877766443 2 34778999999999999999999999999999
Q ss_pred ceEEEEEEECCeecCCCCc---------c---------------------------cccHHHHH-HHHHHhcccccC---
Q 044228 127 RVDVSKFCIGEKDVNNDVA---------S---------------------------EINQAVLQ-ALERGIGASVLV--- 166 (703)
Q Consensus 127 ~m~v~~~~~~~~~~~~~~~---------~---------------------------~~~~~~~~-~l~~~~~~~~~~--- 166 (703)
.|+|++|.+.+..|..... + ...+...+ ....++||++.+
T Consensus 402 ~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~ 481 (1151)
T KOG0206|consen 402 SMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKD 481 (1151)
T ss_pred eeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccC
Confidence 9999999999877754210 0 01112222 233456666652
Q ss_pred ------CcccCChHHHHHHHHHHhCCC---------------ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEE
Q 044228 167 ------PEISVWPTTDWLVSWAKSRSL---------------NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHI 225 (703)
Q Consensus 167 ------~~~~~~p~e~Al~~~~~~~~~---------------~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l 225 (703)
.+.+.+|+|.|+++.|++.|+ ...++|++++.+||+|.|||||||+|.++|+ +++
T Consensus 482 ~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~----i~L 557 (1151)
T KOG0206|consen 482 EDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGR----ILL 557 (1151)
T ss_pred CCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCc----EEE
Confidence 346889999999999999998 2356899999999999999999999999986 999
Q ss_pred EEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC------------------------
Q 044228 226 NWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE------------------------ 281 (703)
Q Consensus 226 ~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~------------------------ 281 (703)
|||||+.+|.++++.. + +...++.++++++|+.+|+||+|+|||+++
T Consensus 558 ycKGADsvI~erL~~~----~-----~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~ 628 (1151)
T KOG0206|consen 558 YCKGADSVIFERLSKN----G-----EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREEL 628 (1151)
T ss_pred EEcCcchhhHhhhhhc----c-----hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHH
Confidence 9999999999999861 1 456788899999999999999999999997
Q ss_pred ---cccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--------------
Q 044228 282 ---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-------------- 340 (703)
Q Consensus 282 ---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-------------- 340 (703)
..+.+|+||+++|.+++ |++|+|+|+.|++||||+||+|||+.|||.+||.+|++.+++
T Consensus 629 L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~ 708 (1151)
T KOG0206|consen 629 LDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEEL 708 (1151)
T ss_pred HHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhh
Confidence 35678999999999999 999999999999999999999999999999999999998761
Q ss_pred -------------------------------CCceeeechhhhccCHH----HHHHhhccCc--eEEEeChhhHHHHHHH
Q 044228 341 -------------------------------SNDIALEGEQFRELNST----ERMAKLDSMT--LMGSCLAADKLLLVQT 383 (703)
Q Consensus 341 -------------------------------~~~~vi~g~~l~~~~~~----~~~~~~~~~~--v~~r~~P~~K~~iv~~ 383 (703)
..+++++|+.+....++ .+.++...|+ +|||++|.||+.+|+.
T Consensus 709 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~l 788 (1151)
T KOG0206|consen 709 SSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKL 788 (1151)
T ss_pred cchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHH
Confidence 35678889888765543 4556666666 9999999999999999
Q ss_pred HHhC-CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHHh-ccchhhhchhhhhhHHhhhh
Q 044228 384 AKEK-GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPILK-LGRCAYCNIQKFTKLQLTGC 461 (703)
Q Consensus 384 lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~-~gR~~~~~i~~~~~~~l~~n 461 (703)
+++. +.++++||| |+||++|+++|||||++++++..+|..+||+.+..|+.+.+++. |||++|.|+.+++.|.+++|
T Consensus 789 Vk~~~~~~TLAIGD-GANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKN 867 (1151)
T KOG0206|consen 789 VKKGLKAVTLAIGD-GANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKN 867 (1151)
T ss_pred HHhcCCceEEEeeC-CCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHH
Confidence 9854 889999999 99999999999999998878888888899999999999999988 99999999999999999999
Q ss_pred hHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHHHhhhccC--CCCCCCCCCCC----CCCCCccCHHHHHHHHH
Q 044228 462 ASGLLITLVTTLILE---ESPITSIQLIWVYCIMYILGGLMMRMEF--KDQEPVTNPPA----RRTKSLLDKVMWKHAAV 532 (703)
Q Consensus 462 ~~~~~~~~~~~~~~~---~~pl~~~~~l~~~~~~~~l~~l~l~~~~--~~~~~~~~~P~----~~~~~l~~~~~~~~~~~ 532 (703)
+...+..+++.++++ +..+.+|++.++|++++++|++++|.-. .+++.+.+.|. ++++..++++.|+.|+.
T Consensus 868 i~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~ 947 (1151)
T KOG0206|consen 868 IAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWML 947 (1151)
T ss_pred HHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHH
Confidence 999999999999887 6678999999999999999999998633 35555556565 36778999999999999
Q ss_pred HHHHHHHHHHHHHHhhccc--CCcccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHHHHHHHHHHH
Q 044228 533 QVLCQVVVLLIFQFAGQVI--PGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLV 610 (703)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 610 (703)
.|++|++++|++.+..+.. ...+.....-..|.+.+++.++..++.+. .....+++|+-++.+++|+++++++
T Consensus 948 ~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~i-----aL~~~ywT~i~~i~i~gSi~~~f~f 1022 (1151)
T KOG0206|consen 948 DGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKI-----ALETSYWTWINHIVIWGSILLWFVF 1022 (1151)
T ss_pred HHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeee-----eeeehheeHHHHHHHHHHHHHHHHH
Confidence 9999999999887655521 11122222223333333333333333332 2233344677778888888888877
Q ss_pred HHHHhh-cccc------------ccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhHHHHh
Q 044228 611 VEFATS-LAGY------------QRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLDWSLSGILRLEF 665 (703)
Q Consensus 611 ~~~~~~-~f~~------------~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~~~~~~~~~~~~ 665 (703)
.++++. .... ..-++.+|+.+++..+++++|++++|.+.+.++|...+++++.+.
T Consensus 1023 ~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~ 1090 (1151)
T KOG0206|consen 1023 LFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEK 1090 (1151)
T ss_pred HHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHh
Confidence 665543 1111 113678999999999999999999999999999999999888764
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-75 Score=645.20 Aligned_cols=571 Identities=19% Similarity=0.235 Sum_probs=462.2
Q ss_pred CcchHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEE
Q 044228 54 KPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKF 133 (703)
Q Consensus 54 ~~~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~ 133 (703)
.|.++...+++++.++.+.+|+|||.+++++..++.+|+ +|+||+|.+++.+...|++|++||||||||||+.+++..+
T Consensus 411 ~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RL-kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv 489 (1140)
T KOG0208|consen 411 LGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRL-KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGV 489 (1140)
T ss_pred cCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHH-HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEE
Confidence 566899999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred EECCeecCCCC------------------cccccHHHHHHHHHHhccccc--CCcccCChHHHHHHHHHH---hCC----
Q 044228 134 CIGEKDVNNDV------------------ASEINQAVLQALERGIGASVL--VPEISVWPTTDWLVSWAK---SRS---- 186 (703)
Q Consensus 134 ~~~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~~~--~~~~~~~p~e~Al~~~~~---~~~---- 186 (703)
.+.+......+ .+...+..--..+.+.||++. ++...|||+|..+++... +.+
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~ 569 (1140)
T KOG0208|consen 490 VPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIED 569 (1140)
T ss_pred EeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccc
Confidence 98543211100 111112111122334556665 678899999988887554 110
Q ss_pred C-------------cc------------ccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccc
Q 044228 187 L-------------NV------------DQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYY 241 (703)
Q Consensus 187 ~-------------~~------------~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~ 241 (703)
- .. ..++.+++.+||+|..+||||+++.++.++ ..+|+|||||.|.+.|++
T Consensus 570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~---~~~ftKGaPE~I~~ic~p- 645 (1140)
T KOG0208|consen 570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDK---MMVFTKGAPESIAEICKP- 645 (1140)
T ss_pred hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCc---eEeeccCCHHHHHHhcCc-
Confidence 0 00 014778999999999999999999976665 999999999999999987
Q ss_pred cccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----------cccccccCcEEEEEEee----cccHHHHHH
Q 044228 242 YDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------VSEIKENGLHLLALAGL----REEIKSTVE 307 (703)
Q Consensus 242 ~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----------~~~~~e~~l~~lG~~~~----r~~~~~~I~ 307 (703)
+..++++++.+++|+.+|+|++++|+|+++ .++.+|+||+|+|++.| |++++.+|+
T Consensus 646 ----------~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~ 715 (1140)
T KOG0208|consen 646 ----------ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVID 715 (1140)
T ss_pred ----------ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHH
Confidence 456789999999999999999999999998 57889999999999999 999999999
Q ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----------------------------------------------
Q 044228 308 ALRNAGVRIILVSEDELLAVTEVACELGNFRPE----------------------------------------------- 340 (703)
Q Consensus 308 ~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~----------------------------------------------- 340 (703)
+|++|+||++|+||||..||..+||+||+..+.
T Consensus 716 eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~ 795 (1140)
T KOG0208|consen 716 ELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSL 795 (1140)
T ss_pred HHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccCh
Confidence 999999999999999999999999999999871
Q ss_pred ------CCceeeechhhhcc---CHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 341 ------SNDIALEGEQFREL---NSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 341 ------~~~~vi~g~~l~~~---~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
+..++++|+.++-+ ..+.+.+++.+..||||++|+||.++|+.+|+.|+.|+|||| |+||+.|||+||||
T Consensus 796 d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGD-GANDCgALKaAdvG 874 (1140)
T KOG0208|consen 796 DVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGD-GANDCGALKAADVG 874 (1140)
T ss_pred hhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCC-CcchhhhhhhcccC
Confidence 13466777777654 357788889999999999999999999999999999999999 99999999999999
Q ss_pred eecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHH
Q 044228 412 ITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVY 489 (703)
Q Consensus 412 Ia~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~ 489 (703)
|+++. .++ .-||.++.. ++++++++|+|||+.+.....+++|...|.++.....++ ++.....+++.|.+.++
T Consensus 875 ISLSe--aEA-SvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~--LY~~~~nl~D~Qfl~iD 949 (1140)
T KOG0208|consen 875 ISLSE--AEA-SVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF--LYLINSNLGDLQFLFID 949 (1140)
T ss_pred cchhh--hhH-hhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe--eeeecccccchhhhhhH
Confidence 99974 333 347899888 999999999999999999999999999998877765443 56668899999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc----------ccccc
Q 044228 490 CIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGM----------NRDIR 559 (703)
Q Consensus 490 ~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 559 (703)
++...+.+++|+..+|..++-..||.. .+++++.+...++|.++..++.++.++......+. ..+..
T Consensus 950 Llii~pia~~m~~~~a~~~L~~~rP~~---~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~ 1026 (1140)
T KOG0208|consen 950 LLIITPIAVMMSRFDASDKLFPKRPPT---NLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSD 1026 (1140)
T ss_pred HHHHHHHHHHHccCcHHHHhcCCCCCc---cccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccce
Confidence 999999999999999999988888766 89999999999999888888888777554422211 14556
Q ss_pred cchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHHHHHHHHHHHHH-----HHhhccccccCChhHH-HHHHH
Q 044228 560 KAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVE-----FATSLAGYQRLNGMHW-GICFI 633 (703)
Q Consensus 560 ~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~~~f~~~~l~~~~w-l~~l~ 633 (703)
+|.+|....++.+++.+.... +.||.++.|+|+.|...+.......+.+.. .....++..+.+-.+. ++++.
T Consensus 1027 ~T~lF~vS~fqYi~~a~v~S~--g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii~~ 1104 (1140)
T KOG0208|consen 1027 NTSLFFVSSFQYIFIALVLSK--GSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFIILL 1104 (1140)
T ss_pred eeEeeehhHHHHHHhheeecc--CCcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcchhHHHHHH
Confidence 889999999999999988776 889999999999887655444443333321 1123566677666443 33344
Q ss_pred HHHHHHHHHHHHHHHHh
Q 044228 634 LAVLPWGIHCAVNFIAG 650 (703)
Q Consensus 634 ~~~~~ll~~~~~k~i~r 650 (703)
..+..+...++.+.+.+
T Consensus 1105 ~~~~~~~~~~~~~~~~~ 1121 (1140)
T KOG0208|consen 1105 VVISYFALNYIQPSVGR 1121 (1140)
T ss_pred HHHHHHHHHHhhhhhhc
Confidence 44444444444443333
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-74 Score=609.67 Aligned_cols=571 Identities=16% Similarity=0.192 Sum_probs=475.0
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhc----CCccccCccccccCCceeeecccccccccCceEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINH----HAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVS 131 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~ 131 (703)
.+|...+.+.+.+....+|.+|-.-+-++-.+-.+.. .++ |..+|+....|+||+++++.+|||||||+|+|+++
T Consensus 348 ~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i-~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~K 426 (1051)
T KOG0210|consen 348 SDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQI-EHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFK 426 (1051)
T ss_pred CchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhc-ccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheee
Confidence 4788899999999999999999999999988888888 654 66899999999999999999999999999999999
Q ss_pred EEEECCeecCCCC--------------------------cccccHHHHHH-HHHHhcccccC--------CcccCChHHH
Q 044228 132 KFCIGEKDVNNDV--------------------------ASEINQAVLQA-LERGIGASVLV--------PEISVWPTTD 176 (703)
Q Consensus 132 ~~~~~~~~~~~~~--------------------------~~~~~~~~~~~-l~~~~~~~~~~--------~~~~~~p~e~ 176 (703)
+++.+...|..+. ....+..+.++ .+.++||++.+ .+++.+|+|.
T Consensus 427 KiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEV 506 (1051)
T KOG0210|consen 427 KIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEV 506 (1051)
T ss_pred eeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeE
Confidence 9999876654322 01122233333 34457777651 2578999999
Q ss_pred HHHHHHHhCCC----------------ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhccc
Q 044228 177 WLVSWAKSRSL----------------NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSY 240 (703)
Q Consensus 177 Al~~~~~~~~~----------------~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~ 240 (703)
||++|.+..|. +...+|++++.+||+|+.||||++||++..++ +..|.|||+.+|.....
T Consensus 507 AiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~e---vtfylKGAD~VMs~iVq- 582 (1051)
T KOG0210|consen 507 AIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEE---VTFYLKGADVVMSGIVQ- 582 (1051)
T ss_pred EEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCce---EEEEEecchHHHhcccc-
Confidence 99999998887 23357999999999999999999999986555 99999999998854332
Q ss_pred ccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----------------------------cccccccCcEE
Q 044228 241 YYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------------------------VSEIKENGLHL 292 (703)
Q Consensus 241 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----------------------------~~~~~e~~l~~ 292 (703)
..+.+++...+|+++|+||+.+|.|.++ ....+|+||++
T Consensus 583 -------------~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlel 649 (1051)
T KOG0210|consen 583 -------------YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLEL 649 (1051)
T ss_pred -------------cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHH
Confidence 2367888899999999999999999997 12357999999
Q ss_pred EEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--------------------------CC
Q 044228 293 LALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE--------------------------SN 342 (703)
Q Consensus 293 lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~--------------------------~~ 342 (703)
+|++|+ |++++.+++.||+||||+||+|||+.+||..||+..++...+ +.
T Consensus 650 L~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~ 729 (1051)
T KOG0210|consen 650 LGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDC 729 (1051)
T ss_pred hcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCc
Confidence 999999 999999999999999999999999999999999999998762 46
Q ss_pred ceeeechhhhcc---CHHHHHHhhccCc--eEEEeChhhHHHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 343 DIALEGEQFREL---NSTERMAKLDSMT--LMGSCLAADKLLLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 343 ~~vi~g~~l~~~---~~~~~~~~~~~~~--v~~r~~P~~K~~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
.++++|+.++-. -++|+.++...+. ++|||+|+||+++++.+|+. |..|+++|| |.||++|+++||+||++-+
T Consensus 730 aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGD-GGNDVsMIq~A~~GiGI~g 808 (1051)
T KOG0210|consen 730 ALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGD-GGNDVSMIQAADVGIGIVG 808 (1051)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcC-CCccchheeecccceeeec
Confidence 789999988754 4688888877665 99999999999999999986 899999999 9999999999999999665
Q ss_pred CcchHHhhccchhhcccccHHHHHh-ccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCch---hHHHHHHHHHHH
Q 044228 417 KCTEMARECSDIVISTVGSLLPILK-LGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPI---TSIQLIWVYCIM 492 (703)
Q Consensus 417 ~~~~~a~~aad~vl~~~~~l~~~i~-~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl---~~~~~l~~~~~~ 492 (703)
++..+|.-|||+.+.+|+.+-+++. |||++|+|..+.-+|.+...++...+++++.....+.|. ..+.++.+...+
T Consensus 809 kEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~Y 888 (1051)
T KOG0210|consen 809 KEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCY 888 (1051)
T ss_pred ccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHH
Confidence 7888888899999999999999998 799999999999999999999999988887766655554 445678889999
Q ss_pred HHHHHHhhhccCC-CCCCCCCCCCC----CCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccchhhHHH
Q 044228 493 YILGGLMMRMEFK-DQEPVTNPPAR----RTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSF 567 (703)
Q Consensus 493 ~~l~~l~l~~~~~-~~~~~~~~P~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~ 567 (703)
+++|.+++..|.. ++++....|+- .+++.++.+.|..|+..++||+.++++..+.. +..+.....++.|.++
T Consensus 889 TmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l---~~~ef~~ivaisFtaL 965 (1051)
T KOG0210|consen 889 TMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLL---FDTEFIHIVAISFTAL 965 (1051)
T ss_pred HHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHH---hhhhheEeeeeeeHHH
Confidence 9999999998774 44444455552 57789999999999999999999988764433 2334556678999999
Q ss_pred HHHHHHHh-hheeecccccccccccchHHHHHHHHHHHHHHHHHHHHHhhccccccCC-hhHHHHHHHHHHHHHHHHHHH
Q 044228 568 TLCQVFNQ-FDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLN-GMHWGICFILAVLPWGIHCAV 645 (703)
Q Consensus 568 v~~~~~~~-~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~-~~~wl~~l~~~~~~ll~~~~~ 645 (703)
+++.+... +..++ ++|.++.+-++++++++..++++.++|+...+. +.++....++.+++++|.++.
T Consensus 966 i~tELiMVaLtv~t-----------w~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~ 1034 (1051)
T KOG0210|consen 966 ILTELIMVALTVRT-----------WHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFI 1034 (1051)
T ss_pred HHHHHHHHhhhhhh-----------hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988765 33333 367888899999999999999999988877654 444445567888999999999
Q ss_pred HHHHhhhcchhhhh
Q 044228 646 NFIAGSFLDWSLSG 659 (703)
Q Consensus 646 k~i~r~~~~~~~~~ 659 (703)
|.++|++.|+...+
T Consensus 1035 K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 1035 KALRRKLSPPSYAK 1048 (1051)
T ss_pred HHHHhhcCCcchhh
Confidence 99999987766543
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-64 Score=546.53 Aligned_cols=601 Identities=15% Similarity=0.158 Sum_probs=466.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCccccccccchhhhhhhhccCcchHHHHHHHHHHhhhhhcCCchHHHHHH
Q 044228 4 LSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGNVSVGTVVKLFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITV 83 (703)
Q Consensus 4 ~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~~P~~L~la~~~ 83 (703)
+-++..+++|++...++.|-.. ..|+.+ .-.+.++-++-|+...+|+.||+-+++
T Consensus 397 f~FILFLlVFAiaAa~Yvwv~G-skd~~R------------------------srYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 397 FIFILFLLVFAIAAAGYVWVEG-SKDPTR------------------------SRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred HHHHHHHHHHHHHhhheEEEec-ccCcch------------------------hhhheeeeeeEEEeccCCCCCchhhhH
Confidence 3456677778877777777655 222222 334567788999999999999999999
Q ss_pred HHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCee-cCCCCcccccHHHHHHHHHHhcc
Q 044228 84 SLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKD-VNNDVASEINQAVLQALERGIGA 162 (703)
Q Consensus 84 ~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 162 (703)
|...+...+ +|.|++|..+-++.-.|+||+.|||||||||+..|.|.++-..... ....+.+..+.+.+..++.| |
T Consensus 452 AVNsSL~AL-ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAsc--H 528 (1160)
T KOG0209|consen 452 AVNSSLIAL-AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASC--H 528 (1160)
T ss_pred HHHHHHHHH-HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHH--H
Confidence 999999999 9999999999999999999999999999999999999998763321 11122233344555555544 4
Q ss_pred ccc--CCcccCChHHHHHHHHHH----hCCC-----ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCCh
Q 044228 163 SVL--VPEISVWPTTDWLVSWAK----SRSL-----NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTA 231 (703)
Q Consensus 163 ~~~--~~~~~~~p~e~Al~~~~~----~~~~-----~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~ 231 (703)
++. ++...|||+|+|.+++.. +.+. ...+..++.+.+.|+|..|||+|++..++-..+.++.+.+||||
T Consensus 529 sLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAP 608 (1160)
T KOG0209|consen 529 SLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAP 608 (1160)
T ss_pred HHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCH
Confidence 543 467899999999999874 1110 11234678999999999999999998754222234889999999
Q ss_pred HHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----------cccccccCcEEEEEEee---
Q 044228 232 STILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------VSEIKENGLHLLALAGL--- 298 (703)
Q Consensus 232 e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----------~~~~~e~~l~~lG~~~~--- 298 (703)
|.|.++.+ +.+.++.+...+++++|.||++++||++. .++++|++|+|.|++.+
T Consensus 609 Evi~~ml~-------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CP 675 (1160)
T KOG0209|consen 609 EVIQEMLR-------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCP 675 (1160)
T ss_pred HHHHHHHH-------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCC
Confidence 99976654 45788999999999999999999999997 58899999999999999
Q ss_pred -cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-------------------------------------
Q 044228 299 -REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE------------------------------------- 340 (703)
Q Consensus 299 -r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~------------------------------------- 340 (703)
|+|++++|++|++.+++++|+||||+.||.++|+++|+....
T Consensus 676 lK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l 755 (1160)
T KOG0209|consen 676 LKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLL 755 (1160)
T ss_pred CCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhh
Confidence 999999999999999999999999999999999999998761
Q ss_pred --CCceeeechhhhccCH-HHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCC
Q 044228 341 --SNDIALEGEQFRELNS-TERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENK 417 (703)
Q Consensus 341 --~~~~vi~g~~l~~~~~-~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~ 417 (703)
.++++++|+.++.+.. +.+.++++.+.||||+.|.||..++..+|+.|+.++|||| |+||++|||+||||||+-.+
T Consensus 756 ~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGD-GTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 756 AETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGD-GTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred hhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecC-CCcchhhhhhcccceehhcC
Confidence 2467889999988765 4577888999999999999999999999999999999999 99999999999999996321
Q ss_pred cch----------------------------------------------------------------------HHhhccc
Q 044228 418 CTE----------------------------------------------------------------------MARECSD 427 (703)
Q Consensus 418 ~~~----------------------------------------------------------------------~a~~aad 427 (703)
.-+ -|.-||.
T Consensus 835 ~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAP 914 (1160)
T KOG0209|consen 835 PEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAP 914 (1160)
T ss_pred ChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccc
Confidence 110 0112334
Q ss_pred hhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCC
Q 044228 428 IVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFK 505 (703)
Q Consensus 428 ~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~ 505 (703)
+... +.+++.+.|+.||++..+.-|.+...- -|.. +.....+.++..+.-+++.|...-.+++. ...+.++..+|
T Consensus 915 FTsK~asv~~v~~IIrQGRctLVtTlQMfKILA-LN~L-isAYslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskP 991 (1160)
T KOG0209|consen 915 FTSKLASVSSVTHIIRQGRCTLVTTLQMFKILA-LNCL-ISAYSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKP 991 (1160)
T ss_pred cccccchHHHHHHHHHhcchhHHHHHHHHHHHH-HHHH-HHHHHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCc
Confidence 4333 788899999999999998888887643 3332 22233455677788899999888777666 46788888999
Q ss_pred CCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccC----------CcccccccchhhHHHHHHHHHHh
Q 044228 506 DQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIP----------GMNRDIRKAMTFNSFTLCQVFNQ 575 (703)
Q Consensus 506 ~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~t~~f~~~v~~~~~~~ 575 (703)
-+.+.++.|.. .+||...+.++++|...|...++++.-...... ..+++..+|.+|......|+...
T Consensus 992 LetLSkeRP~~---nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTF 1068 (1160)
T KOG0209|consen 992 LETLSKERPLP---NIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTF 1068 (1160)
T ss_pred hhhHhhcCCCC---CcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHh
Confidence 88898888877 899999999999999988877776653222111 12367788999998888888776
Q ss_pred hheeecccccccccccchHHHHHHHHHHHHHHHHHH----HHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044228 576 FDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVV----EFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGS 651 (703)
Q Consensus 576 ~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~ 651 (703)
..... +.||..++..|+.++.++.++.++.+... +-++..|+.++++..+-...+.+.++-++..+++..+.+.
T Consensus 1069 AVNY~--G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f 1146 (1160)
T KOG0209|consen 1069 AVNYQ--GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKF 1146 (1160)
T ss_pred hhhcc--CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444 88999999999999888877776655543 3457788999998766555555555555555555555544
Q ss_pred hcc
Q 044228 652 FLD 654 (703)
Q Consensus 652 ~~~ 654 (703)
+++
T Consensus 1147 ~f~ 1149 (1160)
T KOG0209|consen 1147 FFG 1149 (1160)
T ss_pred Hcc
Confidence 444
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-60 Score=539.53 Aligned_cols=338 Identities=17% Similarity=0.269 Sum_probs=286.3
Q ss_pred HHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECC
Q 044228 58 KISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGE 137 (703)
Q Consensus 58 ~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~ 137 (703)
+...+.+.+++++++|||+||.++|++.+.|++|| +|+|+++|+++++|++|++|++|||||||||+|++.+.++...+
T Consensus 245 ~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~-ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~ 323 (673)
T PRK14010 245 FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRV-TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK 323 (673)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC
Confidence 34467788888889999999999999999999999 99999999999999999999999999999999887777765322
Q ss_pred eecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCC
Q 044228 138 KDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGG 217 (703)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~ 217 (703)
. .. ..++++....+ +..+.||+++|+++++++.+.+.. ....+..||++++|+||+.++ +
T Consensus 324 ~-~~-------~~~ll~~a~~~-------~~~s~~P~~~AIv~~a~~~~~~~~--~~~~~~~pF~~~~k~~gv~~~---g 383 (673)
T PRK14010 324 S-SS-------FERLVKAAYES-------SIADDTPEGRSIVKLAYKQHIDLP--QEVGEYIPFTAETRMSGVKFT---T 383 (673)
T ss_pred C-cc-------HHHHHHHHHHh-------cCCCCChHHHHHHHHHHHcCCCch--hhhcceeccccccceeEEEEC---C
Confidence 1 00 11233332222 344779999999999987765211 112345899999999998742 3
Q ss_pred CcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEe
Q 044228 218 DEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAG 297 (703)
Q Consensus 218 ~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~ 297 (703)
+ .+.|||++.++++|+. +|... +.++++..++++++|+|+++++.+. +++|+++
T Consensus 384 ~------~i~kGa~~~il~~~~~----~g~~~-----~~~~~~~~~~~a~~G~~~l~v~~~~-----------~~lG~i~ 437 (673)
T PRK14010 384 R------EVYKGAPNSMVKRVKE----AGGHI-----PVDLDALVKGVSKKGGTPLVVLEDN-----------EILGVIY 437 (673)
T ss_pred E------EEEECCHHHHHHHhhh----cCCCC-----chHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEE
Confidence 2 3359999999999985 22211 2345666778999999999988654 9999999
Q ss_pred e----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC
Q 044228 298 L----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL 373 (703)
Q Consensus 298 ~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~ 373 (703)
+ |+|++++|++||++||+++|+||||+.||.++|+++|+.+ +++|++
T Consensus 438 l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~-----------------------------v~A~~~ 488 (673)
T PRK14010 438 LKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-----------------------------FVAECK 488 (673)
T ss_pred eecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----------------------------EEcCCC
Confidence 9 9999999999999999999999999999999999999986 999999
Q ss_pred hhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchh
Q 044228 374 AADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQ 451 (703)
Q Consensus 374 P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~ 451 (703)
|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+||++||++++ +|+.|.+++++||++|.|++
T Consensus 489 PedK~~iV~~lQ~~G~~VaMtGD-GvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~ 566 (673)
T PRK14010 489 PEDKINVIREEQAKGHIVAMTGD-GTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRG 566 (673)
T ss_pred HHHHHHHHHHHHhCCCEEEEECC-ChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999 799999999999999 99999999999999999999
Q ss_pred hhhhHHhhhhhHHHHHHHHHHH
Q 044228 452 KFTKLQLTGCASGLLITLVTTL 473 (703)
Q Consensus 452 ~~~~~~l~~n~~~~~~~~~~~~ 473 (703)
+++.|.+..|+..++..+...+
T Consensus 567 ~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 567 SLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred HHHheeeeccHHHHHHHHHHHH
Confidence 9999999999988776555433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-59 Score=533.14 Aligned_cols=339 Identities=18% Similarity=0.269 Sum_probs=286.1
Q ss_pred HHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeec
Q 044228 61 ILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDV 140 (703)
Q Consensus 61 ~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 140 (703)
++.+++++++++|||+|+.++|++...|++|+ +|+|+++|+++++|++|++|++|||||||||+|+|.+.+++..+..
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~-ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~- 325 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRV-LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV- 325 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHH-hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-
Confidence 78889999999999999999999999999999 9999999999999999999999999999999999999998754321
Q ss_pred CCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHh-CCCcc-ccccceEEEecCCCCCCeEEEEEEeCCCC
Q 044228 141 NNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKS-RSLNV-DQNLSIVQYRKLSSHNKVCGVLMKINGGD 218 (703)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~-~~~~~-~~~~~~l~~~~F~s~~k~msviv~~~~~~ 218 (703)
. .+++++....+ +..+.||.++|+++++++ .+... +..++..+..||++.+|+|++.+ +|.
T Consensus 326 ~-------~~~ll~~a~~~-------s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g~ 388 (679)
T PRK01122 326 T-------EEELADAAQLS-------SLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DGR 388 (679)
T ss_pred C-------HHHHHHHHHHh-------cCCCCCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CCE
Confidence 1 11344433333 445789999999999986 34421 12245677899999998888754 232
Q ss_pred cceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee
Q 044228 219 EDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL 298 (703)
Q Consensus 219 ~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~ 298 (703)
.|.|||+|.+++.|.. +|.. .++++++..++++++|.|++++|++. +++|++++
T Consensus 389 ------~~~kGa~e~il~~~~~----~g~~-----~~~~~~~~~~~~a~~G~~~l~va~~~-----------~~lG~i~l 442 (679)
T PRK01122 389 ------EIRKGAVDAIRRYVES----NGGH-----FPAELDAAVDEVARKGGTPLVVAEDN-----------RVLGVIYL 442 (679)
T ss_pred ------EEEECCHHHHHHHHHh----cCCc-----ChHHHHHHHHHHHhCCCcEEEEEECC-----------eEEEEEEE
Confidence 5689999999999964 2221 23567788889999999999999876 99999999
Q ss_pred ----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 ----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 ----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
|+|++++|++||++||+++|+||||+.||.+||+++|+++ ++||++|
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~-----------------------------v~A~~~P 493 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-----------------------------FLAEATP 493 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------------------EEccCCH
Confidence 9999999999999999999999999999999999999986 9999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQK 452 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~ 452 (703)
+||.++|+.+|++|+.|+|+|| |+||+|||++|||||||| +|+|+|+++||++++ +|..+.+++++||++.-+--.
T Consensus 494 edK~~iV~~lQ~~G~~VaMtGD-GvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~ 571 (679)
T PRK01122 494 EDKLALIRQEQAEGRLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGA 571 (679)
T ss_pred HHHHHHHHHHHHcCCeEEEECC-CcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHh
Confidence 9999999999999999999999 999999999999999999 899999999999999 999999999999999854444
Q ss_pred hhhHHhhhhhH----HHHHHHHHHHhcC
Q 044228 453 FTKLQLTGCAS----GLLITLVTTLILE 476 (703)
Q Consensus 453 ~~~~~l~~n~~----~~~~~~~~~~~~~ 476 (703)
...|++. |-+ .++.+++...+++
T Consensus 572 ~~~f~~~-n~~~~~~~i~p~~~~~~~~~ 598 (679)
T PRK01122 572 LTTFSIA-NDVAKYFAIIPAMFAATYPQ 598 (679)
T ss_pred hhhhhHH-HHHHHHHHHHHHHHHhhCcc
Confidence 5667665 433 4444555444443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-60 Score=535.99 Aligned_cols=327 Identities=20% Similarity=0.258 Sum_probs=291.0
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
+|..++.+++++|+++|||+|.+++|+++..|+.+. +|+||++|+++++|.++++|+++||||||||+|+|++.++...
T Consensus 351 ~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a-A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~ 429 (713)
T COG2217 351 DWETALYRALAVLVIACPCALGLATPTAILVGIGRA-ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVAL 429 (713)
T ss_pred cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH-HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecC
Confidence 677899999999999999999999999999999999 9999999999999999999999999999999999999999876
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+. ++ .+++++.+.. |..|.||+++|+++++++.+. ...+ +|.+.. +.|+..+.+
T Consensus 430 ~~--~e-------~~~L~laAal-------E~~S~HPiA~AIv~~a~~~~~---~~~~-----~~~~i~-G~Gv~~~v~- 483 (713)
T COG2217 430 DG--DE-------DELLALAAAL-------EQHSEHPLAKAIVKAAAERGL---PDVE-----DFEEIP-GRGVEAEVD- 483 (713)
T ss_pred CC--CH-------HHHHHHHHHH-------HhcCCChHHHHHHHHHHhcCC---CCcc-----ceeeec-cCcEEEEEC-
Confidence 54 21 2677777776 888999999999999987653 1111 144444 678888774
Q ss_pred CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEE
Q 044228 217 GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA 296 (703)
Q Consensus 217 ~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~ 296 (703)
|+. +++ |+++.+.+.-... .. ..+..+.+.++|..++.++.++ +++|++
T Consensus 484 g~~---v~v---G~~~~~~~~~~~~-------------~~-~~~~~~~~~~~G~t~v~va~dg-----------~~~g~i 532 (713)
T COG2217 484 GER---VLV---GNARLLGEEGIDL-------------PL-LSERIEALESEGKTVVFVAVDG-----------KLVGVI 532 (713)
T ss_pred CEE---EEE---cCHHHHhhcCCCc-------------cc-hhhhHHHHHhcCCeEEEEEECC-----------EEEEEE
Confidence 432 655 9999885432110 11 4566778899999999999998 999999
Q ss_pred ee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 297 GL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 297 ~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++ |+|++++|++||+.|+++.|+||||+.+|+++|+++||+. +++.+
T Consensus 533 ~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-----------------------------v~Ael 583 (713)
T COG2217 533 ALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-----------------------------VRAEL 583 (713)
T ss_pred EEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-----------------------------heccC
Confidence 99 9999999999999999999999999999999999999976 99999
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhch
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i 450 (703)
.|+||.++|+.+|++|++|+|+|| |.||+|||++|||||||| +|+|+|+++||+++. +++.++++++.+|+++++|
T Consensus 584 lPedK~~~V~~l~~~g~~VamVGD-GINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~I 661 (713)
T COG2217 584 LPEDKAEIVRELQAEGRKVAMVGD-GINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRII 661 (713)
T ss_pred CcHHHHHHHHHHHhcCCEEEEEeC-CchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999 599999999999999 8999999999999999999
Q ss_pred hhhhhHHhhhhhHHHHHHHHHH
Q 044228 451 QKFTKLQLTGCASGLLITLVTT 472 (703)
Q Consensus 451 ~~~~~~~l~~n~~~~~~~~~~~ 472 (703)
|||+.|++.||.+++++++++.
T Consensus 662 kqNl~~A~~yn~~~iplA~~g~ 683 (713)
T COG2217 662 KQNLFWAFGYNAIAIPLAAGGL 683 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998873
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-56 Score=502.13 Aligned_cols=331 Identities=17% Similarity=0.275 Sum_probs=285.3
Q ss_pred HHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeec
Q 044228 61 ILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDV 140 (703)
Q Consensus 61 ~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 140 (703)
.+...+++++++|||+|+...+.....|++|+ +|+|+++|+++++|++|++|++|||||||||+|+|++.+++..+..
T Consensus 249 ~~~~lvallV~aiP~aLg~l~~av~iag~~r~-ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~- 326 (675)
T TIGR01497 249 SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV-LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV- 326 (675)
T ss_pred HHHHHHHHHHHhCchhhhhHHHHHHHHHHHHH-HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC-
Confidence 57778999999999999888888888899999 9999999999999999999999999999999999999998753221
Q ss_pred CCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccc-cccceEEEecCCCCCCeEEEEEEeCCCCc
Q 044228 141 NNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVD-QNLSIVQYRKLSSHNKVCGVLMKINGGDE 219 (703)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~-~~~~~l~~~~F~s~~k~msviv~~~~~~~ 219 (703)
. .+++++....+ +..+.||.++|+++++++.+.... ..++..+..||++.+|++++.+. +|+
T Consensus 327 ~-------~~~ll~~aa~~-------~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g~- 389 (675)
T TIGR01497 327 D-------EKTLADAAQLA-------SLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NGR- 389 (675)
T ss_pred c-------HHHHHHHHHHh-------cCCCCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CCe-
Confidence 1 11344444433 455789999999999998765221 22345678999999877776543 342
Q ss_pred ceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee-
Q 044228 220 DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 298 (703)
Q Consensus 220 ~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~- 298 (703)
.+.|||+|.+++.|.. +|.. .++++++.+++++++|.|++++|++. +++|++++
T Consensus 390 -----~~~kGa~e~i~~~~~~----~g~~-----~~~~~~~~~~~~a~~G~r~l~va~~~-----------~~lG~i~l~ 444 (675)
T TIGR01497 390 -----MIRKGAVDAIKRHVEA----NGGH-----IPTDLDQAVDQVARQGGTPLVVCEDN-----------RIYGVIYLK 444 (675)
T ss_pred -----EEEECCHHHHHHHHHh----cCCC-----CcHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEEec
Confidence 5789999999988853 2221 13567788889999999999999977 99999999
Q ss_pred ---cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 ---REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 ---r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
|||++++|++||++|++++|+|||+..+|.++|+++|+.+ +++|++|+
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-----------------------------v~a~~~Pe 495 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD-----------------------------FIAEATPE 495 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-----------------------------EEcCCCHH
Confidence 9999999999999999999999999999999999999986 89999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKF 453 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~ 453 (703)
||.++|+.+|++|+.|+|+|| |.||+|||++|||||||+ +|++.++++||+++. +|+.+.+++++||+++-+....
T Consensus 496 dK~~~v~~lq~~g~~VamvGD-G~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~ 573 (675)
T TIGR01497 496 DKIALIRQEQAEGKLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGAL 573 (675)
T ss_pred HHHHHHHHHHHcCCeEEEECC-CcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999 799999999999999 9999999999999999999999
Q ss_pred hhHHhhhhhHHHH
Q 044228 454 TKLQLTGCASGLL 466 (703)
Q Consensus 454 ~~~~l~~n~~~~~ 466 (703)
..|++..++.-.+
T Consensus 574 ~t~~~~~~~~~~~ 586 (675)
T TIGR01497 574 TTFSIANDVAKYF 586 (675)
T ss_pred heeeecccHHHHH
Confidence 9999887765443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-57 Score=501.49 Aligned_cols=347 Identities=18% Similarity=0.188 Sum_probs=294.7
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
..+..+|..++++++++|||+|++|+|+|.+.|+... +++|+|+|+++++|.+.++++++||||||||+|++.|.++..
T Consensus 527 ~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg-A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~ 605 (951)
T KOG0207|consen 527 DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG-ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKS 605 (951)
T ss_pred HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh-hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEe
Confidence 5889999999999999999999999999999999999 999999999999999999999999999999999999999998
Q ss_pred CCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeC
Q 044228 136 GEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
..+.... .+.+.++.+. |..+.||+.+|+++||++... .......+..-.|..+.+ ++-++.
T Consensus 606 ~~~~~~~-------~e~l~~v~a~-------Es~SeHPig~AIv~yak~~~~-~~~~~~~~~~~~~pg~g~--~~~~~~- 667 (951)
T KOG0207|consen 606 LSNPISL-------KEALALVAAM-------ESGSEHPIGKAIVDYAKEKLV-EPNPEGVLSFEYFPGEGI--YVTVTV- 667 (951)
T ss_pred cCCcccH-------HHHHHHHHHH-------hcCCcCchHHHHHHHHHhccc-ccCccccceeecccCCCc--ccceEE-
Confidence 7764222 1566666666 888999999999999997662 111111112222222221 133333
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEE
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLAL 295 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~ 295 (703)
++.+ +. -|+.+++.+.-.. ..+++++.+++..+.|..+.++++++ ++.|+
T Consensus 668 ~~~~---i~---iGN~~~~~r~~~~-------------~~~~i~~~~~~~e~~g~tvv~v~vn~-----------~l~gv 717 (951)
T KOG0207|consen 668 DGNE---VL---IGNKEWMSRNGCS-------------IPDDILDALTESERKGQTVVYVAVNG-----------QLVGV 717 (951)
T ss_pred eeeE---Ee---echHHHHHhcCCC-------------CchhHHHhhhhHhhcCceEEEEEECC-----------EEEEE
Confidence 2332 44 4999988654222 13568888999999999999999999 99999
Q ss_pred Eee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE
Q 044228 296 AGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS 371 (703)
Q Consensus 296 ~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r 371 (703)
+.+ |+|+..+|+.||+.||++.|+||||..+|.++|+++|+.. |+|.
T Consensus 718 ~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~-----------------------------V~ae 768 (951)
T KOG0207|consen 718 FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN-----------------------------VYAE 768 (951)
T ss_pred EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------------------EEec
Confidence 999 9999999999999999999999999999999999999776 9999
Q ss_pred eChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhc
Q 044228 372 CLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCN 449 (703)
Q Consensus 372 ~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~ 449 (703)
+.|+||.++|+.+|+++..|+|+|| |.||+|||.+|||||+|| .|+++|.++||+++. ++..++.++..+|++.+|
T Consensus 769 v~P~~K~~~Ik~lq~~~~~VaMVGD-GINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~r 846 (951)
T KOG0207|consen 769 VLPEQKAEKIKEIQKNGGPVAMVGD-GINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKR 846 (951)
T ss_pred cCchhhHHHHHHHHhcCCcEEEEeC-CCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhh
Confidence 9999999999999999999999999 999999999999999999 689999999999999 999999999999999999
Q ss_pred hhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHH
Q 044228 450 IQKFTKLQLTGCASGLLITLVTTLILEESPITSI 483 (703)
Q Consensus 450 i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~ 483 (703)
+|.|+.|++.||+++++++....+ .++..+.||
T Consensus 847 Ik~N~~~A~~yn~~~IpIAagvF~-P~~~~L~Pw 879 (951)
T KOG0207|consen 847 IKLNFVWALIYNLVGIPIAAGVFA-PFGIVLPPW 879 (951)
T ss_pred HHHHHHHHHHHHHhhhhhheeccc-CCccccCch
Confidence 999999999999999998886544 333334443
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-53 Score=477.69 Aligned_cols=304 Identities=29% Similarity=0.425 Sum_probs=275.2
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++|||+||+++|+++..+..++ +|+|+++|+++++|+||++|++|||||||||+|+|++.+++..
T Consensus 176 ~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~-~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~ 254 (499)
T TIGR01494 176 SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL-AKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVL 254 (499)
T ss_pred cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH-HHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEec
Confidence 367899999999999999999999999999999999 9999999999999999999999999999999999999999765
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+. ++.++||+|.|+++++++.+ ++..||++.+|+|+++++.++
T Consensus 255 ~~----------------------------~~~s~hp~~~ai~~~~~~~~---------~~~~~f~~~~~~~~~~~~~~~ 297 (499)
T TIGR01494 255 GG----------------------------EYLSGHPDERALVKSAKWKI---------LNVFEFSSVRKRMSVIVRGPD 297 (499)
T ss_pred CC----------------------------CcCCCChHHHHHHHHhhhcC---------cceeccCCCCceEEEEEecCC
Confidence 32 23489999999999987422 356899999999999987532
Q ss_pred CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEE
Q 044228 217 GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA 296 (703)
Q Consensus 217 ~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~ 296 (703)
+ .|+||+++.+.++|.. +.+..++++++|+|++++|+++ +++|++
T Consensus 298 ~-------~~~~G~~~~i~~~~~~-----------------~~~~~~~~~~~g~~~~~~a~~~-----------~~~g~i 342 (499)
T TIGR01494 298 G-------TYVKGAPEFVLSRVKD-----------------LEEKVKELAQSGLRVLAVASKE-----------TLLGLL 342 (499)
T ss_pred c-------EEEeCCHHHHHHhhHH-----------------HHHHHHHHHhCCCEEEEEEECC-----------eEEEEE
Confidence 2 3589999999988753 1223445778999999999998 999999
Q ss_pred ee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 297 GL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 297 ~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++ |++++++|+.|+++|++++|+|||++.+|..+|+++|+ ++++
T Consensus 343 ~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------~~~~ 390 (499)
T TIGR01494 343 GLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------FARV 390 (499)
T ss_pred EecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------eecc
Confidence 99 99999999999999999999999999999999999985 5789
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhch
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i 450 (703)
+|+||.++|+.+|+.|+.|+|+|| |.||+||+++|||||+|+ ++++||+++. ++..+..++++||++++++
T Consensus 391 ~p~~K~~~v~~l~~~g~~v~~vGD-g~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i 463 (499)
T TIGR01494 391 TPEEKAALVEALQKKGRVVAMTGD-GVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTI 463 (499)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECC-ChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999996 6889999999 7999999999999999999
Q ss_pred hhhhhHHhhhhhHHHHHHHHHH
Q 044228 451 QKFTKLQLTGCASGLLITLVTT 472 (703)
Q Consensus 451 ~~~~~~~l~~n~~~~~~~~~~~ 472 (703)
++++.|++++|+..+++++++.
T Consensus 464 ~~~~~~~~~~n~~~~~~a~~~~ 485 (499)
T TIGR01494 464 KSNIFWAIAYNLILIPLAALLA 485 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887644
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-55 Score=464.95 Aligned_cols=488 Identities=19% Similarity=0.237 Sum_probs=369.8
Q ss_pred HHHHHHHHHhhhhh-cCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEE--EEE
Q 044228 59 ISILVSALTVVAIA-VQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSK--FCI 135 (703)
Q Consensus 59 ~~~~~~~i~ilv~~-~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~--~~~ 135 (703)
.......+.++++. +|.|||..+++.++.|..++ +++|.++|+.+|+|+|+.+|++|+|||||||.|++++.+ +..
T Consensus 274 ~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL-aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev 352 (942)
T KOG0205|consen 274 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL-SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV 352 (942)
T ss_pred hhhhhhheheeeecccccccceeeeehhhHHHHHH-HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCccee
Confidence 34444556666666 99999999999999999999 999999999999999999999999999999999999988 322
Q ss_pred CCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeC
Q 044228 136 GEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
.-+..+.+ +++ ..++.++ .....|.+|.|+++..++- -+.+..++.++..||++..||-...+.++
T Consensus 353 ~v~gv~~D-------~~~---L~A~rAs---r~en~DAID~A~v~~L~dP-Keara~ikevhF~PFnPV~Krta~ty~d~ 418 (942)
T KOG0205|consen 353 FVKGVDKD-------DVL---LTAARAS---RKENQDAIDAAIVGMLADP-KEARAGIKEVHFLPFNPVDKRTALTYIDP 418 (942)
T ss_pred eecCCChH-------HHH---HHHHHHh---hhcChhhHHHHHHHhhcCH-HHHhhCceEEeeccCCccccceEEEEECC
Confidence 21111111 222 2222222 3346789999999877642 24556789999999999999999999999
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCc--ccccccCcEEE
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV--SEIKENGLHLL 293 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~--~~~~e~~l~~l 293 (703)
+|+ .+-.+|||||.|++.|..- .+.++++.+.+++|+++|+|.+++|++..++ .+.....+.++
T Consensus 419 dG~----~~r~sKGAPeqil~l~~~~----------~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~ 484 (942)
T KOG0205|consen 419 DGN----WHRVSKGAPEQILKLCNED----------HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFV 484 (942)
T ss_pred CCC----EEEecCCChHHHHHHhhcc----------CcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccc
Confidence 998 6777999999999999863 4457899999999999999999999998763 33346678999
Q ss_pred EEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhh-hccCHHHHHHhhccCce
Q 044228 294 ALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQF-RELNSTERMAKLDSMTL 368 (703)
Q Consensus 294 G~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l-~~~~~~~~~~~~~~~~v 368 (703)
|+.-+ |.++.++|++..+.|..|.|+|||....++..++++|+-..-..+-.+-|.+- +.+...+..+.+.+..-
T Consensus 485 gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adg 564 (942)
T KOG0205|consen 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADG 564 (942)
T ss_pred cccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccC
Confidence 99998 99999999999999999999999999999999999999875333222222221 12333456677777788
Q ss_pred EEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchh
Q 044228 369 MGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCA 446 (703)
Q Consensus 369 ~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~ 446 (703)
|+.+.|+||.++|+.||++|+.|+|+|| |+||+|+||.||+|||+. .++|+|+.+||+|+. .++.+..+++.+|.+
T Consensus 565 fAgVfpehKy~iV~~Lq~r~hi~gmtgd-gvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraI 642 (942)
T KOG0205|consen 565 FAGVFPEHKYEIVKILQERKHIVGMTGD-GVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (942)
T ss_pred ccccCHHHHHHHHHHHhhcCceecccCC-Ccccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999 699999999999999 999999999999999
Q ss_pred hhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHH
Q 044228 447 YCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVM 526 (703)
Q Consensus 447 ~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~ 526 (703)
|+|++.+..|++...+-.+ +.+......+..-+++...+++.++.|. +.++++.+...+. ..|.+++. +..
T Consensus 643 fqrmknytiyavsitiriv-~gfml~alIw~~df~pfmvliiailnd~-t~mtis~d~v~ps---p~pdswkl----~~i 713 (942)
T KOG0205|consen 643 FQRMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILNDG-TIMTISKDRVKPS---PTPDSWKL----KEI 713 (942)
T ss_pred HHHHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcCC-ceEEEEcccCCCC---CCCcccch----hhh
Confidence 9999999999988776544 3444344444566777777777666664 4566655553211 11333332 455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc------cCCcc-----cccccchhhHHHHHHHHHHhhheeecccccccc
Q 044228 527 WKHAAVQVLCQVVVLLIFQFAGQV------IPGMN-----RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQP 588 (703)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~ 588 (703)
|..-.+.+.|.+++...++|.... .++.. ........|....+.....+|..|. ..++|.
T Consensus 714 fatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrs--r~w~~~ 784 (942)
T KOG0205|consen 714 FATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRS--RSWSFV 784 (942)
T ss_pred heeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEec--cCCccc
Confidence 555556677777776666554332 12221 1122233455555555566677776 334444
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-52 Score=487.94 Aligned_cols=322 Identities=20% Similarity=0.257 Sum_probs=277.7
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
+|..++.+++++++++|||||++++|+++..++.++ +|+||++|+++++|+++++|++|||||||||+|+|+|.++...
T Consensus 382 ~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~a-ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 460 (741)
T PRK11033 382 PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA-ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA 460 (741)
T ss_pred CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH-HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEec
Confidence 566788999999999999999999999999999999 9999999999999999999999999999999999999998764
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeE---EEEEE
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVC---GVLMK 213 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~m---sviv~ 213 (703)
+. +. .++++++.... |..+.||+++|+++++++.+. .+||.++++.+ |+...
T Consensus 461 ~~-~~-------~~~~l~~aa~~-------e~~s~hPia~Ai~~~a~~~~~----------~~~~~~~~~~~~g~Gv~~~ 515 (741)
T PRK11033 461 TG-IS-------ESELLALAAAV-------EQGSTHPLAQAIVREAQVRGL----------AIPEAESQRALAGSGIEGQ 515 (741)
T ss_pred CC-CC-------HHHHHHHHHHH-------hcCCCCHHHHHHHHHHHhcCC----------CCCCCcceEEEeeEEEEEE
Confidence 42 11 12455544433 667899999999999987654 13555555543 45444
Q ss_pred eCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEE
Q 044228 214 INGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLL 293 (703)
Q Consensus 214 ~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~l 293 (703)
. +|.. +. .|+++.+.+. .+++.+.++++.++|.|++++|++. +++
T Consensus 516 ~-~g~~---~~---ig~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~v~va~~~-----------~~~ 560 (741)
T PRK11033 516 V-NGER---VL---ICAPGKLPPL-----------------ADAFAGQINELESAGKTVVLVLRND-----------DVL 560 (741)
T ss_pred E-CCEE---EE---Eecchhhhhc-----------------cHHHHHHHHHHHhCCCEEEEEEECC-----------EEE
Confidence 4 3432 44 4999887431 1334555678899999999999988 999
Q ss_pred EEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE
Q 044228 294 ALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM 369 (703)
Q Consensus 294 G~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~ 369 (703)
|++++ |+|++++|++|+++|++++|+|||+..+|.++|+++||. .+
T Consensus 561 g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------~~ 610 (741)
T PRK11033 561 GLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------------------FR 610 (741)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------ee
Confidence 99999 999999999999999999999999999999999999995 57
Q ss_pred EEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhh
Q 044228 370 GSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAY 447 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~ 447 (703)
++.+|+||.++|+.+|+. +.|+|+|| |.||+|||++|||||+|| ++++.++++||+++. ++..+.+++++||+++
T Consensus 611 ~~~~p~~K~~~v~~l~~~-~~v~mvGD-giNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~ 687 (741)
T PRK11033 611 AGLLPEDKVKAVTELNQH-APLAMVGD-GINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATH 687 (741)
T ss_pred cCCCHHHHHHHHHHHhcC-CCEEEEEC-CHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 789999999999999965 58999999 999999999999999999 799999999999998 9999999999999999
Q ss_pred hchhhhhhHHhhhhhHHHHHHHHHH
Q 044228 448 CNIQKFTKLQLTGCASGLLITLVTT 472 (703)
Q Consensus 448 ~~i~~~~~~~l~~n~~~~~~~~~~~ 472 (703)
++|++|+.|++.||++.+++++++.
T Consensus 688 ~~I~~nl~~a~~~n~~~i~~a~~g~ 712 (741)
T PRK11033 688 ANIRQNITIALGLKAIFLVTTLLGI 712 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999887653
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-49 Score=468.27 Aligned_cols=325 Identities=19% Similarity=0.211 Sum_probs=279.5
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
.+...+.+++++++++|||||++++|+++..+++++ +|+|+++|+++++|+++++|++|||||||||+|+|++.++...
T Consensus 463 ~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~-a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 541 (834)
T PRK10671 463 QIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA-AEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF 541 (834)
T ss_pred HHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH-HHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc
Confidence 356788899999999999999999999999999999 9999999999999999999999999999999999999998754
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+.. . ..+.+.+.... |..+.||+++|++++++..+. ....+|++.+ +.|+.... +
T Consensus 542 ~~~-~-------~~~~l~~a~~~-------e~~s~hp~a~Ai~~~~~~~~~--------~~~~~~~~~~-g~Gv~~~~-~ 596 (834)
T PRK10671 542 NGV-D-------EAQALRLAAAL-------EQGSSHPLARAILDKAGDMTL--------PQVNGFRTLR-GLGVSGEA-E 596 (834)
T ss_pred CCC-C-------HHHHHHHHHHH-------hCCCCCHHHHHHHHHHhhCCC--------CCcccceEec-ceEEEEEE-C
Confidence 321 1 11445554444 677999999999998874322 1123444444 45665554 3
Q ss_pred CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEE
Q 044228 217 GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA 296 (703)
Q Consensus 217 ~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~ 296 (703)
|. .+.+|+++.+.+.... .+++.+.+++++++|.+++++++++ .++|.+
T Consensus 597 g~------~~~~G~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~v~va~~~-----------~~~g~~ 645 (834)
T PRK10671 597 GH------ALLLGNQALLNEQQVD--------------TKALEAEITAQASQGATPVLLAVDG-----------KAAALL 645 (834)
T ss_pred CE------EEEEeCHHHHHHcCCC--------------hHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEE
Confidence 43 2355999988542210 2345666778889999999999988 899999
Q ss_pred ee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 297 GL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 297 ~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++ ||+++++|++|++.|++++|+|||+..++..+++++|+.. +++++
T Consensus 646 ~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-----------------------------~~~~~ 696 (834)
T PRK10671 646 AIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-----------------------------VIAGV 696 (834)
T ss_pred EccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-----------------------------EEeCC
Confidence 99 9999999999999999999999999999999999999976 89999
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhch
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i 450 (703)
.|++|.+.++.+|++++.|+|+|| |.||++|+++||+||+|| ++++.++++||+++. ++..|.+++++||+++++|
T Consensus 697 ~p~~K~~~i~~l~~~~~~v~~vGD-g~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i 774 (834)
T PRK10671 697 LPDGKAEAIKRLQSQGRQVAMVGD-GINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNM 774 (834)
T ss_pred CHHHHHHHHHHHhhcCCEEEEEeC-CHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999 799999999999999 9999999999999999999
Q ss_pred hhhhhHHhhhhhHHHHHHH
Q 044228 451 QKFTKLQLTGCASGLLITL 469 (703)
Q Consensus 451 ~~~~~~~l~~n~~~~~~~~ 469 (703)
++|+.|++.||++.+++++
T Consensus 775 ~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 775 KQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=443.40 Aligned_cols=320 Identities=22% Similarity=0.253 Sum_probs=272.3
Q ss_pred HHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCee
Q 044228 60 SILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKD 139 (703)
Q Consensus 60 ~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 139 (703)
.++.+++++++++|||||++++|+++..+++++ +|+|+++|+++++|+|+++|++|||||||||+|+|++.++...+..
T Consensus 226 ~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a-a~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~ 304 (562)
T TIGR01511 226 FALEFAVTVLIIACPCALGLATPTVIAVATGLA-AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR 304 (562)
T ss_pred HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH-HHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC
Confidence 477889999999999999999999999999999 9999999999999999999999999999999999999998765421
Q ss_pred cCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCc
Q 044228 140 VNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDE 219 (703)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~ 219 (703)
. .+++++++... |..+.||+++|+++++++.+.... . ..++++.. +.|+....++ .+
T Consensus 305 -~-------~~~~l~~aa~~-------e~~s~HPia~Ai~~~~~~~~~~~~-~-----~~~~~~~~-g~Gi~~~~~g-~~ 361 (562)
T TIGR01511 305 -D-------RTELLALAAAL-------EAGSEHPLAKAIVSYAKEKGITLV-E-----VSDFKAIP-GIGVEGTVEG-TK 361 (562)
T ss_pred -C-------HHHHHHHHHHH-------hccCCChHHHHHHHHHHhcCCCcC-C-----CCCeEEEC-CceEEEEECC-EE
Confidence 1 12555555444 677899999999999987664211 1 11222222 4566666543 32
Q ss_pred ceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee-
Q 044228 220 DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 298 (703)
Q Consensus 220 ~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~- 298 (703)
++ .|+++.+.+.... +.++.++|.++++++.+. +++|.+.+
T Consensus 362 ---~~---iG~~~~~~~~~~~---------------------~~~~~~~g~~~~~~~~~~-----------~~~g~~~~~ 403 (562)
T TIGR01511 362 ---IQ---LGNEKLLGENAIK---------------------IDGKAEQGSTSVLVAVNG-----------ELAGVFALE 403 (562)
T ss_pred ---EE---EECHHHHHhCCCC---------------------CChhhhCCCEEEEEEECC-----------EEEEEEEec
Confidence 54 4999987432110 012347899999999888 99999999
Q ss_pred ---cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 ---REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 ---r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
||+++++|++|++.|++++|+|||+..++..+++++|+. ++++..|+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------~~~~~~p~ 453 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------VRAEVLPD 453 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------EEccCChH
Confidence 999999999999999999999999999999999999994 68889999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKF 453 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~ 453 (703)
+|.++++.++++++.|+|+|| |.||++|+++||+||+|| .+++.++++||+++. +++.+.++++.||++++++++|
T Consensus 454 ~K~~~v~~l~~~~~~v~~VGD-g~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn 531 (562)
T TIGR01511 454 DKAALIKELQEKGRVVAMVGD-GINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQN 531 (562)
T ss_pred HHHHHHHHHHHcCCEEEEEeC-CCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999 699999999999998 9999999999999999999999
Q ss_pred hhHHhhhhhHHHHHHHHHHH
Q 044228 454 TKLQLTGCASGLLITLVTTL 473 (703)
Q Consensus 454 ~~~~l~~n~~~~~~~~~~~~ 473 (703)
+.|++.||++.+++++.+.+
T Consensus 532 ~~~a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 532 LLWAFGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHHHHHhhhh
Confidence 99999999999998886553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=436.88 Aligned_cols=331 Identities=24% Similarity=0.298 Sum_probs=276.4
Q ss_pred HHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCee
Q 044228 60 SILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKD 139 (703)
Q Consensus 60 ~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 139 (703)
.++.+++++++++|||+||+++|+++..+++++ +|+|+++|+++++|++|++|++|||||||||+|+|++.++...+..
T Consensus 195 ~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~-~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~ 273 (556)
T TIGR01525 195 GALYRALAVLVVACPCALGLATPVAILVAIGVA-ARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA 273 (556)
T ss_pred hHHHHHHHHHhhccccchhehhHHHHHHHHHHH-HHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC
Confidence 688899999999999999999999999999999 9999999999999999999999999999999999999999865432
Q ss_pred cCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCc
Q 044228 140 VNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDE 219 (703)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~ 219 (703)
.. ..++++++...+ +..+.||+++|+++++++.+.+....+ ..+.+ . +.++....++..+
T Consensus 274 ~~------~~~~~l~~a~~~-------e~~~~hp~~~Ai~~~~~~~~~~~~~~~-~~~~~-----~-~~gi~~~~~g~~~ 333 (556)
T TIGR01525 274 SI------SEEELLALAAAL-------EQSSSHPLARAIVRYAKKRGLELPKQE-DVEEV-----P-GKGVEATVDGQEE 333 (556)
T ss_pred Cc------cHHHHHHHHHHH-------hccCCChHHHHHHHHHHhcCCCccccc-CeeEe-----c-CCeEEEEECCeeE
Confidence 10 012455544433 566899999999999997765221100 11111 1 2344444422122
Q ss_pred ceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee-
Q 044228 220 DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 298 (703)
Q Consensus 220 ~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~- 298 (703)
+++ |+++.+ +. . +.. ..+.++.+++++++|+|+++++.++ +++|.+.+
T Consensus 334 ---~~l---g~~~~~-~~-~------~~~------~~~~~~~~~~~~~~g~~~~~v~~~~-----------~~~g~i~~~ 382 (556)
T TIGR01525 334 ---VRI---GNPRLL-EL-A------AEP------ISASPDLLNEGESQGKTVVFVAVDG-----------ELLGVIALR 382 (556)
T ss_pred ---EEE---ecHHHH-hh-c------CCC------chhhHHHHHHHhhCCcEEEEEEECC-----------EEEEEEEec
Confidence 444 888876 11 1 100 1223455667889999999999887 99999999
Q ss_pred ---cccHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 ---REEIKSTVEALRNAG-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 ---r~~~~~~I~~l~~ag-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
|||++++|++|+++| ++++|+|||+..++..+++++|+.. +|+++.|
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-----------------------------~f~~~~p 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-----------------------------VHAELLP 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-----------------------------eeccCCH
Confidence 999999999999999 9999999999999999999999976 8999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQK 452 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~ 452 (703)
++|.++++.+++.++.|+|+|| |.||++|+++||+|+++| ++++.+++.||+++. ++..+.+++++||++++++++
T Consensus 434 ~~K~~~v~~l~~~~~~v~~vGD-g~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~ 511 (556)
T TIGR01525 434 EDKLAIVKELQEEGGVVAMVGD-GINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQ 511 (556)
T ss_pred HHHHHHHHHHHHcCCEEEEEEC-ChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999 799999999999999 999999999999999999999
Q ss_pred hhhHHhhhhhHHHHHHHHHHH
Q 044228 453 FTKLQLTGCASGLLITLVTTL 473 (703)
Q Consensus 453 ~~~~~l~~n~~~~~~~~~~~~ 473 (703)
++.|++.||++.+++++.+.+
T Consensus 512 nl~~a~~~N~~~i~~a~~g~~ 532 (556)
T TIGR01525 512 NLAWALGYNLVAIPLAAGGLL 532 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998887654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-47 Score=429.83 Aligned_cols=308 Identities=22% Similarity=0.267 Sum_probs=266.0
Q ss_pred HHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeec
Q 044228 61 ILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDV 140 (703)
Q Consensus 61 ~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 140 (703)
++.+++++++++|||+||+++|+++..+++++ +|+|+++|+++++|++|++|++|||||||||+|+|++.++...
T Consensus 196 ~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~-~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---- 270 (536)
T TIGR01512 196 WVYRALVLLVVASPCALVISAPAAYLSAISAA-ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---- 270 (536)
T ss_pred HHHHHHHHHhhcCccccccchHHHHHHHHHHH-HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----
Confidence 88899999999999999999999999999999 9999999999999999999999999999999999999988531
Q ss_pred CCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCcc
Q 044228 141 NNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDED 220 (703)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~ 220 (703)
++++..... +..+.||+++|+++++++.+ ..+.....| +.++.... +|.+
T Consensus 271 ----------~~l~~a~~~-------e~~~~hp~~~Ai~~~~~~~~-----~~~~~~~~~------g~gi~~~~-~g~~- 320 (536)
T TIGR01512 271 ----------EVLRLAAAA-------EQASSHPLARAIVDYARKRE-----NVESVEEVP------GEGVRAVV-DGGE- 320 (536)
T ss_pred ----------HHHHHHHHH-------hccCCCcHHHHHHHHHHhcC-----CCcceEEec------CCeEEEEE-CCeE-
Confidence 355554433 66789999999999998643 111122222 33444444 3332
Q ss_pred eeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee--
Q 044228 221 KIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL-- 298 (703)
Q Consensus 221 ~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~-- 298 (703)
++ .|+++.+.+.. ...+..+|.+++.++.+. ++.|.+.+
T Consensus 321 --~~---ig~~~~~~~~~-----------------------~~~~~~~~~~~~~v~~~~-----------~~~g~i~~~d 361 (536)
T TIGR01512 321 --VR---IGNPRSLEAAV-----------------------GARPESAGKTIVHVARDG-----------TYLGYILLSD 361 (536)
T ss_pred --EE---EcCHHHHhhcC-----------------------CcchhhCCCeEEEEEECC-----------EEEEEEEEec
Confidence 44 49987663211 014567888998888776 99999999
Q ss_pred --cccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 --REEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 --r~~~~~~I~~l~~agi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
||+++++|++|+++|+ +++|+|||+..++..+++++|+.. +|+++.|+
T Consensus 362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-----------------------------~f~~~~p~ 412 (536)
T TIGR01512 362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-----------------------------VHAELLPE 412 (536)
T ss_pred cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-----------------------------hhhccCcH
Confidence 9999999999999999 999999999999999999999976 78999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKF 453 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~ 453 (703)
+|.++++.++++++.|+|+|| |.||++|+++||+|+++|.++++.++++||+++. ++..+.+++++||++++++++|
T Consensus 413 ~K~~~i~~l~~~~~~v~~vGD-g~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n 491 (536)
T TIGR01512 413 DKLEIVKELREKYGPVAMVGD-GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQN 491 (536)
T ss_pred HHHHHHHHHHhcCCEEEEEeC-CHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999999995589999999999996 9999999999999999999999
Q ss_pred hhHHhhhhhHHHHHHHHHH
Q 044228 454 TKLQLTGCASGLLITLVTT 472 (703)
Q Consensus 454 ~~~~l~~n~~~~~~~~~~~ 472 (703)
+.|++.||++.++++++|.
T Consensus 492 l~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 492 VVIALGIILLLILLALFGV 510 (536)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988764
|
. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=341.05 Aligned_cols=312 Identities=18% Similarity=0.275 Sum_probs=264.5
Q ss_pred HHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeecC
Q 044228 62 LVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVN 141 (703)
Q Consensus 62 ~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~ 141 (703)
+..-++++++.+|-.++--++.--..|+.|+ .+.|++.+++.++|.+|.||++..|||||+|-|+-.-.++++.+...
T Consensus 250 i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv-~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~- 327 (681)
T COG2216 250 VTVLVALLVCLIPTTIGGLLSAIGIAGMDRV-TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVS- 327 (681)
T ss_pred HHHHHHHHHHHhcccHHHHHHHhhhhhhhHh-hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCC-
Confidence 3456788999999999999998888999999 99999999999999999999999999999999988777777665421
Q ss_pred CCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccc--eEEEecCCCCCCeEEEEEEeCCCCc
Q 044228 142 NDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLS--IVQYRKLSSHNKVCGVLMKINGGDE 219 (703)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~--~l~~~~F~s~~k~msviv~~~~~~~ 219 (703)
..++...+..+|+. -..|..+.+++.+++.+...+++.. .....||+.+.|++|+-.. +++
T Consensus 328 ----------~~~la~aa~lsSl~----DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~--~~~- 390 (681)
T COG2216 328 ----------EEELADAAQLASLA----DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP--GGR- 390 (681)
T ss_pred ----------HHHHHHHHHHhhhc----cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCC--CCc-
Confidence 22333334444544 4557778899999988874333322 2467899999966665443 333
Q ss_pred ceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee-
Q 044228 220 DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 298 (703)
Q Consensus 220 ~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~- 298 (703)
-.-|||.+.+.+..+.. +| +.+++++...++-++.|-+.++++.++ +++|++.+
T Consensus 391 -----~irKGA~dai~~~v~~~---~g------~~p~~l~~~~~~vs~~GGTPL~V~~~~-----------~~~GVI~Lk 445 (681)
T COG2216 391 -----EIRKGAVDAIRRYVRER---GG------HIPEDLDAAVDEVSRLGGTPLVVVENG-----------RILGVIYLK 445 (681)
T ss_pred -----eeecccHHHHHHHHHhc---CC------CCCHHHHHHHHHHHhcCCCceEEEECC-----------EEEEEEEeh
Confidence 23689999998766531 22 235788899999999999999999998 99999999
Q ss_pred ---cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 ---REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 ---r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
|++.+|-+.+||+.|||.+|+||||+.||..||++.|+++ ..|+++||
T Consensus 446 DivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-----------------------------fiAeatPE 496 (681)
T COG2216 446 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-----------------------------FIAEATPE 496 (681)
T ss_pred hhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-----------------------------hhhcCChH
Confidence 9999999999999999999999999999999999999998 89999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYC 448 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~ 448 (703)
+|.++++.-|.+|+.|+|+|| |+||+|||.+||||+||. +|+++||+++++|=+ +...+.+.+..|+...-
T Consensus 497 dK~~~I~~eQ~~grlVAMtGD-GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 497 DKLALIRQEQAEGRLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred HHHHHHHHHHhcCcEEEEcCC-CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 999999999999999999999 999999999999999999 799999999999977 88899999999988653
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-25 Score=219.16 Aligned_cols=207 Identities=24% Similarity=0.329 Sum_probs=150.3
Q ss_pred ceeeecccccccccCceEEEEEEECCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCcccc
Q 044228 112 ASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQ 191 (703)
Q Consensus 112 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~ 191 (703)
|++||||||||||+|+|.+ ..+. ....++.+... +..+.||.+.+++.++.+.... .
T Consensus 1 i~~i~fDktGTLt~~~~~v-------~~~~-------~~~~~~~~~~~-------~~~s~~p~~~~~~~~~~~~~~~--~ 57 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-------APPS-------NEAALAIAAAL-------EQGSEHPIGKAIVEFAKNHQWS--K 57 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-------ESCS-------HHHHHHHHHHH-------HCTSTSHHHHHHHHHHHHHHHH--S
T ss_pred CeEEEEecCCCcccCeEEE-------Eecc-------HHHHHHHHHHh-------hhcCCCcchhhhhhhhhhccch--h
Confidence 6899999999999999999 1011 12455555554 5779999999999998852210 0
Q ss_pred ccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCc
Q 044228 192 NLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLR 271 (703)
Q Consensus 192 ~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r 271 (703)
. ..+|.... ..++.... ++ . +. |+++.+.+..... ............+|.+
T Consensus 58 ~-----~~~~~~~~-~~~~~~~~-~~-----~--~~-g~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 108 (215)
T PF00702_consen 58 S-----LESFSEFI-GRGISGDV-DG-----I--YL-GSPEWIHELGIRV--------------ISPDLVEEIQESQGRT 108 (215)
T ss_dssp C-----CEEEEEET-TTEEEEEE-HC-----H--EE-HHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHH
T ss_pred h-----hhhheeee-eccccccc-cc-----c--cc-ccchhhhhccccc--------------cccchhhhHHHhhCCc
Confidence 0 11111111 11222111 11 1 12 8888886544321 1112222334666777
Q ss_pred eEEEEEeecCcccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeee
Q 044228 272 PIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALE 347 (703)
Q Consensus 272 ~l~~A~~~l~~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~ 347 (703)
.+.++.+. .++|.+.+ |++++++|+.|+++|++++|+|||+..++..+++++||...
T Consensus 109 ~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~-------- 169 (215)
T PF00702_consen 109 VIVLAVNL-----------IFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS-------- 169 (215)
T ss_dssp CEEEEESH-----------EEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE--------
T ss_pred ccceeecC-----------eEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc--------
Confidence 77777655 99999999 99999999999999999999999999999999999999542
Q ss_pred chhhhccCHHHHHHhhccCceEEEe--ChhhH--HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC
Q 044228 348 GEQFRELNSTERMAKLDSMTLMGSC--LAADK--LLLVQTAKEKGHVVAFFGGSSTRDTPALKEAD 409 (703)
Q Consensus 348 g~~l~~~~~~~~~~~~~~~~v~~r~--~P~~K--~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Ad 409 (703)
.+++++ +|++| .++++.+|.+++.|+|+|| |.||++|+++||
T Consensus 170 -------------------~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGD-g~nD~~al~~Ag 215 (215)
T PF00702_consen 170 -------------------IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGD-GVNDAPALKAAG 215 (215)
T ss_dssp -------------------EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEES-SGGHHHHHHHSS
T ss_pred -------------------cccccccccccchhHHHHHHHHhcCCCEEEEEcc-CHHHHHHHHhCc
Confidence 389999 99999 9999999977779999999 999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.9e-21 Score=186.63 Aligned_cols=172 Identities=26% Similarity=0.456 Sum_probs=143.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccc
Q 044228 477 ESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNR 556 (703)
Q Consensus 477 ~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (703)
|.|+++.|++|+|++.|.+|+++++.|+|++++|+|||+++++++++++++..++.+|++++++++..++.....++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999998887766555544
Q ss_pred c-------cccchhhHHHHHHHHHHhhheeeccccccc-ccccchHHHHHHHHHHHHHHHHHHHH--HhhccccccCChh
Q 044228 557 D-------IRKAMTFNSFTLCQVFNQFDAMCLLKKAVQ-PVVLKKINFLVVFVIVIAVQVLVVEF--ATSLAGYQRLNGM 626 (703)
Q Consensus 557 ~-------~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~f~~~~l~~~ 626 (703)
. +.+|+.|++++++|+++.+++|+.++..+. .+.++|++++.++++++++++++++. .+.+|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 3 489999999999999999999985432332 47778999999999999999888764 7999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 044228 627 HWGICFILAVLPWGIHCAVNFI 648 (703)
Q Consensus 627 ~wl~~l~~~~~~ll~~~~~k~i 648 (703)
+|+++++.+++.+++++++|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.8e-16 Score=135.00 Aligned_cols=114 Identities=24% Similarity=0.322 Sum_probs=103.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
=++++++|++|++. +++++.|||..-+....|+-.|+... ++++...|+.|.
T Consensus 32 f~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~---------------------------rv~a~a~~e~K~ 83 (152)
T COG4087 32 FSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE---------------------------RVFAGADPEMKA 83 (152)
T ss_pred cHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------eeecccCHHHHH
Confidence 78999999999999 99999999999999999999999864 499999999999
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cC-CCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EE-NKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~-~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
++++.|++.++.|.|+|| |+||.+||++||+||. ++ ++..+-+.++||+++.+...+.++++
T Consensus 84 ~ii~eLkk~~~k~vmVGn-GaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~ 147 (152)
T COG4087 84 KIIRELKKRYEKVVMVGN-GANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147 (152)
T ss_pred HHHHHhcCCCcEEEEecC-CcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhh
Confidence 999999999999999999 9999999999999998 55 23456677999999998877777664
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.7e-15 Score=159.28 Aligned_cols=268 Identities=17% Similarity=0.218 Sum_probs=199.8
Q ss_pred CChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecC--------------------------
Q 044228 229 GTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTE-------------------------- 281 (703)
Q Consensus 229 Ga~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~-------------------------- 281 (703)
|-.+...+.|+++++ +....|+ ...+.++.+....-.-.| .++++|||+..
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 667788899999988 4556788 788888888887777777 69999999753
Q ss_pred ---------------cc----------------cccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHH
Q 044228 282 ---------------VS----------------EIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLA 326 (703)
Q Consensus 282 ---------------~~----------------~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~t 326 (703)
.. +..-++.+|.|++.. +.+....|+.|-++-|+.+..|-+++..
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 011245678899888 9999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC------------------------------------------Cceeeechhh-------hccCH-
Q 044228 327 VTEVACELGNFRPES------------------------------------------NDIALEGEQF-------RELNS- 356 (703)
Q Consensus 327 a~~ia~~~gi~~~~~------------------------------------------~~~vi~g~~l-------~~~~~- 356 (703)
.+-.|+++||..... ++..++-++. ..++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999987511 0111111110 00000
Q ss_pred ------------------------HHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCC--CHHHHhhCCc
Q 044228 357 ------------------------TERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTR--DTPALKEADV 410 (703)
Q Consensus 357 ------------------------~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~N--D~~al~~Adv 410 (703)
++++++..-+..|.+++|+.-.++++.+|++|++|+++|. ..| ..-.+-+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS-~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGS-CANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEecc-ccccccceEEEccce
Confidence 1222222233479999999999999999999999999999 888 4445689999
Q ss_pred ceecCCC------------cc--hHHh----------------hccchhhc--ccccHHHHHhccchhhhchhhhhhHHh
Q 044228 411 GITEENK------------CT--EMAR----------------ECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQL 458 (703)
Q Consensus 411 GIa~~~~------------~~--~~a~----------------~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l 458 (703)
+|++..- ++ ..|+ -++|+.+. .+-.+.++|..+|.....+|+++.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 9997421 11 1111 12233333 344577888899999999999999999
Q ss_pred hhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHh
Q 044228 459 TGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLM 499 (703)
Q Consensus 459 ~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~ 499 (703)
...+....+++++.++..+..++.-+++|.+++...+..+.
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~ 1135 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIG 1135 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988665555
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.3e-13 Score=113.78 Aligned_cols=68 Identities=25% Similarity=0.350 Sum_probs=59.8
Q ss_pred ccCChHHHHHHHHHHhCCC-----ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccc
Q 044228 169 ISVWPTTDWLVSWAKSRSL-----NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYY 241 (703)
Q Consensus 169 ~~~~p~e~Al~~~~~~~~~-----~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~ 241 (703)
..|+|+|.||++++.+.|. ..+..+++++.+||+|+||+|+|+++ +++. +.+|+|||||.|+++|+++
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~----~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGK----YILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCE----EEEEcCCChHHHHHhcCCC
Confidence 6899999999999999864 55678999999999999999999998 3333 7789999999999999863
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-09 Score=107.75 Aligned_cols=126 Identities=18% Similarity=0.066 Sum_probs=95.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeec-hhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEG-EQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g-~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
+|++.+.|+.+++.| ++.++||-....+..+++++|+...-.+.+.+++ ..+. . ... ..+++|
T Consensus 70 ~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t---G----------~~~--~~~~~K 133 (203)
T TIGR02137 70 LEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV---G----------YQL--RQKDPK 133 (203)
T ss_pred CccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE---C----------eee--cCcchH
Confidence 899999999999975 9999999999999999999999753222222221 1000 0 011 357899
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhcc-chhhc-ccccHHHHHhcc
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECS-DIVIS-TVGSLLPILKLG 443 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aa-d~vl~-~~~~l~~~i~~g 443 (703)
..+++.+++.|..+.++|| |.||++|++.||+||++. +.+..+++| |+... +.+.+..++.++
T Consensus 134 ~~~l~~l~~~~~~~v~vGD-s~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 134 RQSVIAFKSLYYRVIAAGD-SYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHhhCCCEEEEeC-CHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 9999999988888999999 999999999999999996 455555454 44444 888888887754
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.6e-09 Score=111.39 Aligned_cols=64 Identities=17% Similarity=0.192 Sum_probs=52.5
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|..-++.+.+. .+.|+++|| |.||++||+.|++|+||+ |+.+.+|+.||+|+. +-.++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD-~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGD-QENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECC-chhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 355555555443 256899999 999999999999999999 899999999999987 6777877775
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.91 E-value=9.3e-09 Score=106.89 Aligned_cols=142 Identities=24% Similarity=0.265 Sum_probs=100.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CC---------------------------------C
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ES---------------------------------N 342 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~---------------------------------~ 342 (703)
.+.++++|+++++.|+++.++||+....+..+.+++|+..+ .. .
T Consensus 22 ~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~ 101 (264)
T COG0561 22 SPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGI 101 (264)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccCc
Confidence 78899999999999999999999999999999999999864 00 0
Q ss_pred ceeeech---------------------------hhhc----------cCH---HHHHHhhc-----cCceEE-------
Q 044228 343 DIALEGE---------------------------QFRE----------LNS---TERMAKLD-----SMTLMG------- 370 (703)
Q Consensus 343 ~~vi~g~---------------------------~l~~----------~~~---~~~~~~~~-----~~~v~~------- 370 (703)
....... .... ... ++..+.+. ....+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~l 181 (264)
T COG0561 102 ALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISL 181 (264)
T ss_pred eEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceE
Confidence 0000000 0000 000 11111111 111222
Q ss_pred EeCh--hhHHHHHHHHHhC-CC---EEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhc
Q 044228 371 SCLA--ADKLLLVQTAKEK-GH---VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 371 r~~P--~~K~~iv~~lq~~-g~---~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
...| .+|..-++.+.+. |- .|+++|| +.||.+||+.|+.||||+ |+.+.+++.||++.. +-.++.+.|++
T Consensus 182 ei~~~g~~K~~al~~l~~~lgi~~~~v~afGD-~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 182 DITPKGVSKGYALQRLAKLLGIKLEEVIAFGD-STNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEecCCCchHHHHHHHHHHhCCCHHHeEEeCC-ccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 2223 4688888887763 43 5999999 999999999999999999 799999999997766 88888888863
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.3e-09 Score=105.24 Aligned_cols=139 Identities=17% Similarity=0.230 Sum_probs=95.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeeechh-h--hcc------------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQ-F--REL------------------ 354 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~g~~-l--~~~------------------ 354 (703)
-+++.++|++|+++|++++++||++...+..+++++++..+ ...+.+.+..+ + ...
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPRDR 99 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhhhh
Confidence 67889999999999999999999999999999999998754 11111111100 0 000
Q ss_pred -----------------CHHHHHHhhccCc--e-----EEEeC--hhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHH
Q 044228 355 -----------------NSTERMAKLDSMT--L-----MGSCL--AADKLLLVQTAKEK----GHVVAFFGGSSTRDTPA 404 (703)
Q Consensus 355 -----------------~~~~~~~~~~~~~--v-----~~r~~--P~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~a 404 (703)
..+.+.+.+.+.. + +...+ ...|...++.+.+. ...++++|| +.||.+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGD-s~ND~~m 178 (215)
T TIGR01487 100 LSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGD-SENDIDL 178 (215)
T ss_pred cccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECC-CHHHHHH
Confidence 0011121111111 1 11222 35788877777653 245899999 9999999
Q ss_pred HhhCCcceecCCCcchHHhhccchhhc--ccccHHHH
Q 044228 405 LKEADVGITEENKCTEMARECSDIVIS--TVGSLLPI 439 (703)
Q Consensus 405 l~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~ 439 (703)
++.|+.|+||+ ++.+.+++.||+++. +-.++.++
T Consensus 179 l~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 179 FRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 99999999999 899999999999987 55555443
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.2e-09 Score=110.49 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=95.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCce-eeechhhhccCHHHHHHhhccCceEE-EeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-ALEGEQFRELNSTERMAKLDSMTLMG-SCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~-vi~g~~l~~~~~~~~~~~~~~~~v~~-r~~P~~ 376 (703)
.|++.+.++.|+++|+++.++||.....+..+.+++|+...-.+.+ +.+|.--. .+.. -+..+.
T Consensus 183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~k~ 248 (322)
T PRK11133 183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDAQY 248 (322)
T ss_pred ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCccc
Confidence 8999999999999999999999999888899999999864211111 11110000 0000 023467
Q ss_pred HHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 377 KLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
|.+.++.+.++ | +.+.++|| |.||.+|++.|++|||+ ++.+..++.||.++. ++.++..++-
T Consensus 249 K~~~L~~la~~lgi~~~qtIaVGD-g~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 249 KADTLTRLAQEYEIPLAQTVAIGD-GANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HHHHHHHHHHHcCCChhhEEEEEC-CHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 88888888654 3 57999999 99999999999999999 689999999999998 7777776654
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-08 Score=103.09 Aligned_cols=141 Identities=18% Similarity=0.201 Sum_probs=97.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeee---chh-----hhcc-------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALE---GEQ-----FREL------------- 354 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~---g~~-----l~~~------------- 354 (703)
.+.+.++|++++++|++++++||+....+..+++++|+..+ ...+.+.+ ++. ++..
T Consensus 22 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (230)
T PRK01158 22 SLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFPE 101 (230)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhccc
Confidence 57889999999999999999999999999999999998653 11122221 110 0000
Q ss_pred -----------------------CHHHHHHhhccC----c-----eEEEeChh--hHHHHHHHHHhC----CCEEEEEeC
Q 044228 355 -----------------------NSTERMAKLDSM----T-----LMGSCLAA--DKLLLVQTAKEK----GHVVAFFGG 396 (703)
Q Consensus 355 -----------------------~~~~~~~~~~~~----~-----v~~r~~P~--~K~~iv~~lq~~----g~~v~~iGD 396 (703)
..+++.+.+.+. . .+....|. .|..-++.+.+. ...++++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD 181 (230)
T PRK01158 102 ASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGD 181 (230)
T ss_pred cceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECC
Confidence 001111111111 1 11233333 377777776554 346899999
Q ss_pred CCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 397 SSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 397 ~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
+.||.+|++.|++|+||+ |+.+.+|+.||+++. +-.++.++|+
T Consensus 182 -~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 182 -SENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred -chhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 999999999999999999 899999999999987 6677777765
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=106.64 Aligned_cols=64 Identities=17% Similarity=0.142 Sum_probs=52.5
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccch--hhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI--VIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~--vl~--~~~~l~~~i~ 441 (703)
.|..-++.+.+. | ..|+++|| |.||++||+.|+.|+||+ |+.+.+|++||+ ++. +-.++.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD-~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGD-AMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecC-CHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 476666666554 2 57999999 999999999999999999 899999999996 544 6677877775
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.8e-08 Score=104.95 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=50.9
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccc--hhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD--IVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad--~vl~--~~~~l~~~i~ 441 (703)
.|..-++.+.+. | +.|+++|| |.||++||+.|+.|+||+ |+.+.+|+.|| .++. +-.++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD-~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGD-GMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcC-CcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555555443 2 56899999 999999999999999999 89999999988 5555 6677877775
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.1e-08 Score=101.48 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=96.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeeechh----h-hccC---------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQ----F-RELN--------------- 355 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~g~~----l-~~~~--------------- 355 (703)
.+.+.++|++++++|++++++||++...+..+++++|+..+ .....+.+.+. + ..+.
T Consensus 17 ~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (225)
T TIGR01482 17 NESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTFPF 96 (225)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcccch
Confidence 56778999999999999999999999999999999996543 01111111100 0 0000
Q ss_pred ---------------------HHHHHHhhccCc---------eEEEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCC
Q 044228 356 ---------------------STERMAKLDSMT---------LMGSCLA--ADKLLLVQTAKEK----GHVVAFFGGSST 399 (703)
Q Consensus 356 ---------------------~~~~~~~~~~~~---------v~~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ 399 (703)
.+...+...... .+....| ..|..-++.+.+. ...++++|| +.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD-~~ 175 (225)
T TIGR01482 97 SRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD-SE 175 (225)
T ss_pred hhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC-CH
Confidence 011111111111 1122233 4688877777654 356999999 99
Q ss_pred CCHHHHhhCCcceecCCCcchHHhhccchhhc--cccc----HHHHHh
Q 044228 400 RDTPALKEADVGITEENKCTEMARECSDIVIS--TVGS----LLPILK 441 (703)
Q Consensus 400 ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~----l~~~i~ 441 (703)
||.+|++.|++|+||+ |+.+.+|+.||+|.. +-.+ +.+.|+
T Consensus 176 NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 176 NDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred hhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 9999999999999999 899999999999986 6666 666554
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-08 Score=103.59 Aligned_cols=137 Identities=15% Similarity=0.202 Sum_probs=96.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhh------------------hcc------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQF------------------REL------ 354 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l------------------~~~------ 354 (703)
-+++.+++++++++|+++++.||+....+..+.+++++..+ ..+.+|..+ ..+
T Consensus 17 ~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~---~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 17 SPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDY---FICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSE---EEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhcccceEEEEEccCcccccccccccccchhh---hcccccceeeecccccchhhheeccchhheeehhhh
Confidence 57889999999999999999999999999999999998743 000001000 000
Q ss_pred -------------------------------------------------------CH-------HHHHHhhccC-c----
Q 044228 355 -------------------------------------------------------NS-------TERMAKLDSM-T---- 367 (703)
Q Consensus 355 -------------------------------------------------------~~-------~~~~~~~~~~-~---- 367 (703)
.. +++.+..... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00 1222222221 1
Q ss_pred --eEEEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHH
Q 044228 368 --LMGSCLA--ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLL 437 (703)
Q Consensus 368 --v~~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~ 437 (703)
-+-.++| ..|..-++.+.+. .+.++++|| +.||.+||+.|+.|+||+ ++++..++.||+++. +-.++.
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD-~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGD-SENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEES-SGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeec-ccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 1223333 6688888887753 357899999 999999999999999999 899999999999988 336776
Q ss_pred HHH
Q 044228 438 PIL 440 (703)
Q Consensus 438 ~~i 440 (703)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.5e-08 Score=97.32 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=79.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC--hhhHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL--AADKLLLV 381 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~--P~~K~~iv 381 (703)
..|+.|+++|+++.++|+.+...+....+.+|+.. .|.... |+-...++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-----------------------------~f~~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-----------------------------FHEGIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-----------------------------EEecCCCCHHHHHHHH
Confidence 57999999999999999999999999999999975 343332 33333333
Q ss_pred HHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 382 QTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 382 ~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
+.++-....++++|| +.||++|++.|++++||+ ++.+.++..|++++.
T Consensus 92 ~~l~~~~~ev~~iGD-~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 92 EEMNISDAEVCYVGD-DLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTT 139 (169)
T ss_pred HHcCcCHHHEEEECC-CHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcC
Confidence 333333457999999 999999999999999999 799999999999886
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.4e-08 Score=98.67 Aligned_cols=112 Identities=23% Similarity=0.312 Sum_probs=87.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCce-----eeechhhhccCHHHHHHhhccCceEEEe-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-----ALEGEQFRELNSTERMAKLDSMTLMGSC- 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~-----vi~g~~l~~~~~~~~~~~~~~~~v~~r~- 372 (703)
+|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.+.+ +++|. +....
T Consensus 79 ~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g~~~ 140 (212)
T COG0560 79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVGPIC 140 (212)
T ss_pred CccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eeeeec
Confidence 8999999999999999999999999999999999999987522211 33443 44333
Q ss_pred ChhhHHHHHHHHHhC-CC---EEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 373 LAADKLLLVQTAKEK-GH---VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~-g~---~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
..+.|.+.++.+.+. |. .+.++|| |.||.|||+.|+.++++. .....+..|+....
T Consensus 141 ~~~~K~~~l~~~~~~~g~~~~~~~a~gD-s~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 141 DGEGKAKALRELAAELGIPLEETVAYGD-SANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred CcchHHHHHHHHHHHcCCCHHHeEEEcC-chhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 447899988776654 43 5899999 999999999999999996 45555555665544
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.2e-08 Score=98.23 Aligned_cols=125 Identities=22% Similarity=0.270 Sum_probs=89.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE-eChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r-~~P~~K 377 (703)
++++++.++.|+++|+++.++||.....+..+.+.+|+...-.+....++..+.. .+.++ ..+..|
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~k 153 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTG-------------LVEGPIVDASYK 153 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEE-------------EecCcccCCccc
Confidence 8999999999999999999999999999999999999875211111111100000 00111 122346
Q ss_pred HHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHH
Q 044228 378 LLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPI 439 (703)
Q Consensus 378 ~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~ 439 (703)
..+++.+.++ + +.+.++|| +.||++|.+.|+++++++ +.+..+++||+++. ++..+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGD-s~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGD-GANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEEC-CHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 7777766544 2 35889999 999999999999999985 67888889999988 66665543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.6e-08 Score=109.83 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=46.4
Q ss_pred CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 389 HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 389 ~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
+.|+++|| |.||++||+.|+.||||+ |+.+.+|+.||+|+. +-.++.++|+
T Consensus 524 eeviAFGD-s~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 524 DEIMAIGD-GENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHEEEEec-chhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 36899999 999999999999999999 899999999999987 7778887775
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.6e-08 Score=91.92 Aligned_cols=106 Identities=15% Similarity=0.245 Sum_probs=84.5
Q ss_pred EEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 291 HLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 291 ~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
..++...++++. +|++|+++|+++.++||++...+..+.+++|+.. .+.
T Consensus 24 ~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-----------------------------~~~ 72 (154)
T TIGR01670 24 EEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-----------------------------LYQ 72 (154)
T ss_pred cEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-----------------------------EEe
Confidence 345554446654 8999999999999999999999999999999875 232
Q ss_pred EeChhhHHHHHHHHHh----CCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 371 SCLAADKLLLVQTAKE----KGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~----~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
.. ..|.+.++.+.+ ..+.++++|| +.||.+|++.|++++++. ++.+..+..||+++.
T Consensus 73 ~~--~~k~~~~~~~~~~~~~~~~~~~~vGD-s~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~ 133 (154)
T TIGR01670 73 GQ--SNKLIAFSDILEKLALAPENVAYIGD-DLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTR 133 (154)
T ss_pred cc--cchHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEec
Confidence 22 345555555433 2467999999 999999999999999998 688889999999988
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.4e-07 Score=98.38 Aligned_cols=64 Identities=23% Similarity=0.317 Sum_probs=52.0
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.+. | +.++++|| +.||++|++.|++|++|| ++.+..++.||+++. +-.++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD-~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGD-NFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCC-ChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 355555554433 2 46999999 999999999999999999 788999999999887 7778887775
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.2e-08 Score=87.82 Aligned_cols=114 Identities=18% Similarity=0.286 Sum_probs=96.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
.-|+.|++.||++-++||++...++.=|+++||.. ++-. -++|....+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-----------------------------~~qG--~~dK~~a~~~ 90 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-----------------------------LYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-----------------------------eeec--hHhHHHHHHH
Confidence 46899999999999999999999999999999986 4433 3678877777
Q ss_pred HHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc------ccccHHHHHhccchhhhch
Q 044228 384 AKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS------TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 384 lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~------~~~~l~~~i~~gR~~~~~i 450 (703)
+.++ -+.|+++|| ..||.|+++..+.++|.. ++.+..++.||+|+. ..+.+.++|..++..+.-.
T Consensus 91 L~~~~~l~~e~~ayiGD-D~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~ 165 (170)
T COG1778 91 LLKKLNLDPEEVAYVGD-DLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEA 165 (170)
T ss_pred HHHHhCCCHHHhhhhcC-ccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHH
Confidence 6654 357999999 999999999999999998 799999999999998 5777788888777665543
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.8e-08 Score=93.79 Aligned_cols=107 Identities=18% Similarity=0.270 Sum_probs=84.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
..|+.|+++|+++.++||.+...+..+++++|+.. +|. ..+.|...++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-----------------------------~f~--g~~~k~~~l~~ 103 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-----------------------------LYQ--GQSNKLIAFSD 103 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-----------------------------eec--CCCcHHHHHHH
Confidence 68999999999999999999999999999999875 333 22446555555
Q ss_pred HHh-CC---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc------ccccHHHHHhcc
Q 044228 384 AKE-KG---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS------TVGSLLPILKLG 443 (703)
Q Consensus 384 lq~-~g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~------~~~~l~~~i~~g 443 (703)
+.+ .| ..++|+|| +.||++|++.|+++++++ ++.+..+..||+++. ..+.+.+.+...
T Consensus 104 ~~~~~gl~~~ev~~VGD-s~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~ 171 (183)
T PRK09484 104 LLEKLAIAPEQVAYIGD-DLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLA 171 (183)
T ss_pred HHHHhCCCHHHEEEECC-CHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHh
Confidence 433 33 57999999 999999999999999988 678888888999985 345556555543
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.5e-07 Score=94.68 Aligned_cols=39 Identities=23% Similarity=0.218 Sum_probs=36.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
-+.++++|++|+++|+++++.||+....+..+++++|+.
T Consensus 26 ~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 26 WQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 356889999999999999999999999999999999985
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.56 E-value=8e-07 Score=91.96 Aligned_cols=140 Identities=18% Similarity=0.156 Sum_probs=89.4
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeeechhhh----------ccCHHHHH------
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQFR----------ELNSTERM------ 360 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~g~~l~----------~~~~~~~~------ 360 (703)
+.+.++|+.|+++|++++++||+....+..+.+++|+..+ ..++.+.+...-. .++.+...
T Consensus 19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~~~ 98 (256)
T TIGR01486 19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLEEL 98 (256)
T ss_pred hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999999999998643 1122232211100 01110000
Q ss_pred -----------------------------------------------------Hhhcc--Cce-----EEEeCh--hhHH
Q 044228 361 -----------------------------------------------------AKLDS--MTL-----MGSCLA--ADKL 378 (703)
Q Consensus 361 -----------------------------------------------------~~~~~--~~v-----~~r~~P--~~K~ 378 (703)
+.+.+ +.+ +-...| ..|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg 178 (256)
T TIGR01486 99 SEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSDKG 178 (256)
T ss_pred HHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCCHH
Confidence 00000 000 011111 3455
Q ss_pred HHHHHHHhC------CCEEEEEeCCCCCCHHHHhhCCcceecCCCcc---hHHhhc---cchhhc--ccccHHHHHh
Q 044228 379 LLVQTAKEK------GHVVAFFGGSSTRDTPALKEADVGITEENKCT---EMAREC---SDIVIS--TVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~------g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~---~~a~~a---ad~vl~--~~~~l~~~i~ 441 (703)
.-++.+.+. .+.++++|| +.||.+|++.|+.||||+ |+. +..|+. ++++.. +-.++.++++
T Consensus 179 ~ai~~l~~~~~i~~~~~~~~a~GD-~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 179 KAANALKQFYNQPGGAIKVVGLGD-SPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcC-CHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 555555432 456999999 999999999999999999 676 467775 457765 7777777765
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=4e-07 Score=90.74 Aligned_cols=124 Identities=20% Similarity=0.208 Sum_probs=91.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE--EeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG--SCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~--r~~P~~ 376 (703)
.|++++.++.|+++ +++.++|+.....+..+.+++|+...-.+....+++.. +.. -..|+.
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------i~~~~~~~p~~ 132 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM----------------ITGYDLRQPDG 132 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe----------------EECccccccch
Confidence 78999999999999 99999999999999999999998642111111111110 000 124678
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccch-hhcccccHHHHHh
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI-VISTVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~-vl~~~~~l~~~i~ 441 (703)
|...++.++..+..++|+|| |.||++|.++|++|+..+. ..+.....++. ++.++..+...+.
T Consensus 133 k~~~l~~~~~~~~~~v~iGD-s~~D~~~~~aa~~~v~~~~-~~~~~~~~~~~~~~~~~~el~~~l~ 196 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGD-SYNDTTMLGEADAGILFRP-PANVIAEFPQFPAVHTYDELLAAID 196 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeC-CHHHHHHHHhCCCCEEECC-CHHHHHhCCcccccCCHHHHHHHHH
Confidence 88999999888899999999 9999999999999998763 33333345565 5557777776665
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.48 E-value=5.8e-07 Score=92.97 Aligned_cols=62 Identities=21% Similarity=0.194 Sum_probs=51.1
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHH
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPI 439 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~ 439 (703)
.|..-++.+.+. .+.++++|| +.||++|++.|+.|+||+ ++.+.+++.||+++. +-.++.++
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD-~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGD-GMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCC-cHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 477777777654 257999999 999999999999999999 799999999999987 55555543
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.1e-06 Score=87.18 Aligned_cols=115 Identities=18% Similarity=0.116 Sum_probs=80.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
++++.+.++.|+++|+++.++|+-....+..+++.+|+... ....+...+-....+ ..+....|..|.
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~g~~~p----------~~~~~~~~~~k~ 149 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV--YSNELVFDEKGFIQP----------DGIVRVTFDNKG 149 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE--EEEEEEEcCCCeEec----------ceeeEEccccHH
Confidence 89999999999999999999999999999999999997541 111111110000000 012234466787
Q ss_pred HHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccc
Q 044228 379 LLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD 427 (703)
Q Consensus 379 ~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad 427 (703)
+.++.+.++ .+.++++|| +.||++|++.||++++++. +....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGD-s~~D~~~a~~ag~~~a~~~-~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGD-SKNDLPMFEVADISISLGD-EGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcC-CHhHHHHHHhcCCeEEECC-Cccchhhccc
Confidence 777766543 346999999 9999999999999999973 4444555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.7e-07 Score=85.62 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=77.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceee----echhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIAL----EGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi----~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
-|+++|.+..|++.|.++.++||.-..-+..+|.++||+..+-+...+ +|+-.-.-. --.-+..
T Consensus 90 T~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~------------~~ptsds 157 (227)
T KOG1615|consen 90 TPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDT------------NEPTSDS 157 (227)
T ss_pred CCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccccc------------CCccccC
Confidence 789999999999999999999999999999999999998742111111 111100000 0001123
Q ss_pred hhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 375 ADKLLLVQTAKEK--GHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 375 ~~K~~iv~~lq~~--g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
..|+++++.+++. -..++|+|| |+||.+|...||.=|+.++
T Consensus 158 ggKa~~i~~lrk~~~~~~~~mvGD-GatDlea~~pa~afi~~~g 200 (227)
T KOG1615|consen 158 GGKAEVIALLRKNYNYKTIVMVGD-GATDLEAMPPADAFIGFGG 200 (227)
T ss_pred CccHHHHHHHHhCCChheeEEecC-CccccccCCchhhhhccCC
Confidence 5799999999985 458999999 9999999999888887664
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.3e-06 Score=87.40 Aligned_cols=64 Identities=22% Similarity=0.166 Sum_probs=49.9
Q ss_pred hHHHHHHHHHh----CC-CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHh----hcc-chhh--c--ccccHHHHHh
Q 044228 376 DKLLLVQTAKE----KG-HVVAFFGGSSTRDTPALKEADVGITEENKCTEMAR----ECS-DIVI--S--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~----~g-~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~----~aa-d~vl--~--~~~~l~~~i~ 441 (703)
.|..-++.+.+ .. +.|+++|| +.||++|++.|++|++|+ |+.+.+| .+| +.+. . +-.++.+.|+
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GD-s~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGD-SPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcC-ChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56655655553 25 88999999 999999999999999999 8999988 666 5666 2 5667776665
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.1e-06 Score=84.36 Aligned_cols=92 Identities=18% Similarity=0.235 Sum_probs=68.9
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh-h--
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA-D-- 376 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~-~-- 376 (703)
+++.+.|+.++++|++++++||+....+..+++.+|+... .++..+....- +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~----~v~~~~~~~~~----------~~~~~~~~~~~~~~~ 157 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD----NVIGNELFDNG----------GGIFTGRITGSNCGG 157 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG----GEEEEEEECTT----------CCEEEEEEEEEEESH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce----EEEEEeeeecc----------cceeeeeECCCCCCc
Confidence 4566999999999999999999999999999999999852 11111110000 11244555554 4
Q ss_pred HHHHHHHH------HhCCCEEEEEeCCCCCCHHHHh
Q 044228 377 KLLLVQTA------KEKGHVVAFFGGSSTRDTPALK 406 (703)
Q Consensus 377 K~~iv~~l------q~~g~~v~~iGD~G~ND~~al~ 406 (703)
|.+.++.+ +.....+.++|| |.||.+|+|
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGD-s~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGD-SINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEES-SGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEEC-CHHHHHHhC
Confidence 99999999 345789999999 999999986
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00027 Score=79.18 Aligned_cols=93 Identities=23% Similarity=0.254 Sum_probs=72.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
++++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+.|.
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-----~Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-----GVFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-----EEEeCCC------------------ccccCCchHH
Confidence 8999999999999999999999999999999999999843 2332221 1135667777
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
+.++....+ +.+.++|| ..||.++++.|+-.++++.
T Consensus 131 ~~l~~~l~~-~~~~yvGD-S~~Dlp~~~~A~~av~Vn~ 166 (479)
T PRK08238 131 AALVEAFGE-RGFDYAGN-SAADLPVWAAARRAIVVGA 166 (479)
T ss_pred HHHHHHhCc-cCeeEecC-CHHHHHHHHhCCCeEEECC
Confidence 655533222 22577899 9999999999999999973
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.3e-06 Score=83.36 Aligned_cols=124 Identities=24% Similarity=0.213 Sum_probs=83.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CceeeechhhhccCHHHHHHhhccCceEEE-----
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGS----- 371 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r----- 371 (703)
+|++.+.++.|+++|+++.++||.....+..+.+.+|+..... +....+.+.. +.+.
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~----------------~~g~~~~~~ 149 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE----------------YAGFDENEP 149 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc----------------EECccCCCc
Confidence 7999999999999999999999999999999999999973100 0001110000 0000
Q ss_pred -eChhhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhh--CCcceecCCCc-chHHhhccchhhcccccHHHH
Q 044228 372 -CLAADKLLLVQTAKEK--GHVVAFFGGSSTRDTPALKE--ADVGITEENKC-TEMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 372 -~~P~~K~~iv~~lq~~--g~~v~~iGD~G~ND~~al~~--AdvGIa~~~~~-~~~a~~aad~vl~~~~~l~~~ 439 (703)
..+..|.+.++.+.++ .+.++++|| +.||+.|.++ ++++++.++.. .+.....+|+++.++..+.+.
T Consensus 150 ~~~~~~K~~~i~~~~~~~~~~~~i~iGD-s~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 150 TSRSGGKAEAVQHIKKKHGYKTMVMIGD-GATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred ccCCccHHHHHHHHHHHcCCCceEEEeC-CHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 1123477777776654 357899999 9999999777 46666655321 233344578887776666544
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.6e-06 Score=83.24 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=86.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC-CCCceeeechhhhccCHHHHHHhhccCce-EEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP-ESNDIALEGEQFRELNSTERMAKLDSMTL-MGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~-~~~~~vi~g~~l~~~~~~~~~~~~~~~~v-~~r~~P~~ 376 (703)
+|++.+.++.|++.|+++.++||.....+..+.+.++.... ..+...++|..+....+. .... +.......
T Consensus 72 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~-------~~~~~~~~~cg~~ 144 (214)
T TIGR03333 72 REGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH-------PCDGTCQNQCGCC 144 (214)
T ss_pred cccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC-------CCccccccCCCCC
Confidence 89999999999999999999999999999999888754322 011233344332211000 0000 00011357
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHh--hccchhhcccccHHHHHh
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAR--ECSDIVISTVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~--~aad~vl~~~~~l~~~i~ 441 (703)
|..+++.++.....+.|+|| |.||.+|.+.||++++-+ .-.+-.+ ..+.+...+|..+.+.++
T Consensus 145 K~~~l~~~~~~~~~~i~iGD-g~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 145 KPSLIRKLSEPNDYHIVIGD-SVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHHHHhhcCCcEEEEeC-CHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 99999999888888999999 999999999999988754 1112111 112222227776666654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.8e-05 Score=78.56 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=75.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCcee------eechhhhccCHHHHHHhhccCceEEEe
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIA------LEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~v------i~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++++.+.++.++++|++++++||.....+..+++.+|+..--..... .+|+.. --.+
T Consensus 89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~-----------------~~~~ 151 (202)
T TIGR01490 89 YPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID-----------------GNNC 151 (202)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------CCCC
Confidence 88999999999999999999999999999999999998642001111 111100 0123
Q ss_pred ChhhHHHHHHHHHh-CC---CEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 373 LAADKLLLVQTAKE-KG---HVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 373 ~P~~K~~iv~~lq~-~g---~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
.++.|.+.++.+.+ .+ +.+.++|| +.||.+|++.|+.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gD-s~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGD-SISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeC-CcccHHHHHhCCCcEEeCC
Confidence 45788887776654 33 36889999 9999999999999999863
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.06 E-value=3.9e-05 Score=78.30 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=51.7
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccc----hhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD----IVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad----~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.++ | ..++++|| +.||.+|++.|+.|++|+ ++.+..++.|| ++.. +-.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD-~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGD-SGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcC-CccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 577777776553 2 35889999 999999999999999999 79999999999 6655 5566777775
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.4e-05 Score=79.25 Aligned_cols=40 Identities=25% Similarity=0.318 Sum_probs=36.5
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
+++.++|++|+++|++++++||+....+..+.+++|+..+
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~ 57 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP 57 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 4689999999999999999999999999999999998643
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.7e-06 Score=78.92 Aligned_cols=97 Identities=22% Similarity=0.190 Sum_probs=69.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE--EEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM--GSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~--~r~~P~~ 376 (703)
++++.+.++.+++.|++++++||.....+..+++.+|+..--.+....+.+. .+.. .+. ....+..
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g--~~~g----------~~~~~~~~~~~~ 142 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG--LLTG----------PIEGQVNPEGEC 142 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC--EEeC----------ccCCcccCCcch
Confidence 7899999999999999999999999999999999999864211111111000 0000 000 1245678
Q ss_pred HHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhC
Q 044228 377 KLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEA 408 (703)
Q Consensus 377 K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~A 408 (703)
|...++.++++ ...+.++|| |.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeC-CHHHHHHHhcC
Confidence 99999887654 346899999 99999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.03 E-value=2.1e-05 Score=76.99 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=75.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE-eChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r-~~P~~K 377 (703)
++++.+.++.|++.|+++.++|+.+......+.+..|+... ...++..+...+ .+..+.-...++..+.. .....|
T Consensus 74 ~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 74 DPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV--FIEIYSNPASFD-NDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh--eeEEeccCceEC-CCCcEEEecCCCCccCcCCCCCCH
Confidence 88999999999999999999999999999999999998642 112222211110 00000000011111111 112359
Q ss_pred HHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 378 LLLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 378 ~~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
.++++.++++ ...+.++|| |.||+.|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD-~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGD-GVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECC-CcchhchHhcCCcccc
Confidence 9999999887 889999999 9999999999988665
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.5e-05 Score=79.38 Aligned_cols=141 Identities=15% Similarity=0.151 Sum_probs=91.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----CCceeeech-hhh--------------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGE-QFR-------------------- 352 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-----~~~~vi~g~-~l~-------------------- 352 (703)
.|+..++++++++.|+.++++||+.......+.+++++..++ ..+.+..+. ...
T Consensus 23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (249)
T TIGR01485 23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIVVAI 102 (249)
T ss_pred HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHHHHH
Confidence 688899999999999999999999999999999999987651 122222111 000
Q ss_pred -----cc-----------------CHH-------HHHHhhcc----Cce-EE-----EeCh--hhHHHHHHHHHhC----
Q 044228 353 -----EL-----------------NST-------ERMAKLDS----MTL-MG-----SCLA--ADKLLLVQTAKEK---- 387 (703)
Q Consensus 353 -----~~-----------------~~~-------~~~~~~~~----~~v-~~-----r~~P--~~K~~iv~~lq~~---- 387 (703)
.+ ..+ ++.+.+.+ +.+ .+ ...| ..|...++.+.+.
T Consensus 103 ~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~ 182 (249)
T TIGR01485 103 TDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAME 182 (249)
T ss_pred HhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCC
Confidence 00 001 11111111 111 11 2333 4688888877664
Q ss_pred CCEEEEEeCCCCCCHHHHhh-CCcceecCCCcchHHhhccc-------hhhc--ccccHHHHHh
Q 044228 388 GHVVAFFGGSSTRDTPALKE-ADVGITEENKCTEMARECSD-------IVIS--TVGSLLPILK 441 (703)
Q Consensus 388 g~~v~~iGD~G~ND~~al~~-AdvGIa~~~~~~~~a~~aad-------~vl~--~~~~l~~~i~ 441 (703)
...|+++|| +.||++|++. ++.|++|+ |+.+..++.++ ++.. .-+++.+.+.
T Consensus 183 ~~~~i~~GD-~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 183 PSQTLVCGD-SGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred ccCEEEEEC-ChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 357999999 9999999998 67999999 78888876443 3332 4456666654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.00 E-value=2e-05 Score=79.63 Aligned_cols=124 Identities=24% Similarity=0.273 Sum_probs=91.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-|+++++++.|+++|++..++|+++...+..+.+..|+... ...++.++... ...-.|....
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~--F~~i~g~~~~~----------------~~KP~P~~l~ 152 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY--FDVIVGGDDVP----------------PPKPDPEPLL 152 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc--cceEEcCCCCC----------------CCCcCHHHHH
Confidence 68999999999999999999999999999999999999874 11222212111 1112455555
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC---cceecCCC-cchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEAD---VGITEENK-CTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Ad---vGIa~~~~-~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
...+.+....+.++|||| ..+|+.|=++|+ ||+..|.+ +.......+|+++.++..+...+.
T Consensus 153 ~~~~~~~~~~~~~l~VGD-s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 153 LLLEKLGLDPEEALMVGD-SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred HHHHHhCCChhheEEECC-CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 555555544447999999 999999999999 66777642 455666678999888777776554
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.1e-05 Score=79.42 Aligned_cols=123 Identities=24% Similarity=0.287 Sum_probs=86.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC--hhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL--AAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~--P~~ 376 (703)
.|++.+.++.|++.|+++.++||........+.+..|+... ...++.++.. .+.. |+-
T Consensus 95 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~kp~~~~ 154 (226)
T PRK13222 95 YPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY--FSVVIGGDSL------------------PNKKPDPAP 154 (226)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC--ccEEEcCCCC------------------CCCCcChHH
Confidence 89999999999999999999999999999999999998653 2223222211 1122 222
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecC--CC-cchHHhhccchhhcccccHHHHHhc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEE--NK-CTEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~--~~-~~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
-..+.+.++...+.++++|| +.||+.+.+.|++ +|++. .. ..+.....+|+++.++..+...+.+
T Consensus 155 ~~~~~~~~~~~~~~~i~igD-~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 155 LLLACEKLGLDPEEMLFVGD-SRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHcCCChhheEEECC-CHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 23344444444567999999 9999999999999 55543 11 2233445688877788888877654
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.99 E-value=6.2e-05 Score=75.96 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 301 EIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 301 ~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
.+.++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3789999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.8e-05 Score=78.45 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CceeeechhhhccCHHHHHHhhccCce-E-EEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTL-M-GSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~vi~g~~l~~~~~~~~~~~~~~~~v-~-~r~~P 374 (703)
+|++.+.++.|++.|+++.++||-....+..+.+.. +....- +...++|+.+....+. .... + .++ .
T Consensus 76 ~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~-------p~~~~~~~~~-~ 146 (219)
T PRK09552 76 REGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH-------PCDEHCQNHC-G 146 (219)
T ss_pred CcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC-------CccccccccC-C
Confidence 899999999999999999999999999999999888 643100 0112333322100000 0000 0 001 1
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHh--hccchhhcccccHHHHHh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAR--ECSDIVISTVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~--~aad~vl~~~~~l~~~i~ 441 (703)
..|..+++.++.....+.++|| |.||++|.++||+.++-+ .-.+.++ ..+.+...+|..+...++
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGD-s~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGD-SITDLEAAKQADKVFARD-FLITKCEELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeC-CHHHHHHHHHCCcceeHH-HHHHHHHHcCCCccccCCHHHHHHHHH
Confidence 3488888888877778999999 999999999999977732 1112211 113333336666665553
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.91 E-value=6.9e-05 Score=82.69 Aligned_cols=119 Identities=16% Similarity=0.111 Sum_probs=79.1
Q ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----CCceeeechhhhc-----------------------c---
Q 044228 306 VEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGEQFRE-----------------------L--- 354 (703)
Q Consensus 306 I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-----~~~~vi~g~~l~~-----------------------~--- 354 (703)
++++++.|+.+++.||+.......+.++.++..++ ....+..+..+.. .
T Consensus 38 ~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l 117 (413)
T PLN02382 38 WEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETSKFPEL 117 (413)
T ss_pred HHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHhcCCCc
Confidence 38889999999999999999999999999987762 1111111111000 0
Q ss_pred -----------------CH-------HHHHHhhc----cCc------eEEEeCh--hhHHHHHHHHHhC-------CCEE
Q 044228 355 -----------------NS-------TERMAKLD----SMT------LMGSCLA--ADKLLLVQTAKEK-------GHVV 391 (703)
Q Consensus 355 -----------------~~-------~~~~~~~~----~~~------v~~r~~P--~~K~~iv~~lq~~-------g~~v 391 (703)
.+ +++.+.+. ++. -+-...| ..|...++.+.+. ...+
T Consensus 118 ~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ 197 (413)
T PLN02382 118 KLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNT 197 (413)
T ss_pred ccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcE
Confidence 00 11112121 111 1224444 3488888887664 2478
Q ss_pred EEEeCCCCCCHHHHhhCC-cceecCCCcchHHhhcc
Q 044228 392 AFFGGSSTRDTPALKEAD-VGITEENKCTEMARECS 426 (703)
Q Consensus 392 ~~iGD~G~ND~~al~~Ad-vGIa~~~~~~~~a~~aa 426 (703)
+++|| +.||++||+.|+ .||+|+ |+.+..++.+
T Consensus 198 iafGD-s~NDleMl~~ag~~gvam~-NA~~elk~~a 231 (413)
T PLN02382 198 LVCGD-SGNDAELFSVPDVYGVMVS-NAQEELLQWY 231 (413)
T ss_pred EEEeC-CHHHHHHHhcCCCCEEEEc-CCcHHHHHHH
Confidence 99999 999999999999 699999 7998888643
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.87 E-value=3e-05 Score=70.76 Aligned_cols=112 Identities=18% Similarity=0.156 Sum_probs=73.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
++++.+.+++|+++|++++++||.....+..+.+.+|+... ...++......................+.+-.|+.+.
T Consensus 26 ~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (139)
T cd01427 26 YPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLL 103 (139)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccccccccccccccCCCCHHHHH
Confidence 89999999999999999999999999999999999998532 1112211111000000000000111133345566666
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhC-Cccee
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEA-DVGIT 413 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~A-dvGIa 413 (703)
.+.+.+....+.++++|| +.||+.|.+.+ .-+|+
T Consensus 104 ~~~~~~~~~~~~~~~igD-~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 104 AALKLLGVDPEEVLMVGD-SLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHcCCChhhEEEeCC-CHHHHHHHHHcCCceee
Confidence 676666655678999999 99999999984 33443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.83 E-value=5.4e-05 Score=75.42 Aligned_cols=124 Identities=12% Similarity=0.106 Sum_probs=83.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.++++.|+++|+++.++|+.....+..+.+..|+... ...++.+++. ...+-.|+-=.
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL--FDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh--eeeEEecCcC----------------CCCCCChHHHH
Confidence 79999999999999999999999999999999999998642 1122222111 01111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce-ec--CC-CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TE--EN-KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI-a~--~~-~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.++-..+.++++|| +.+|+.+-++|++.. ++ |. +..+..+..+|+++.++..+..+++
T Consensus 139 ~~~~~~~~~~~~~l~igD-~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 139 EALRLLDVPPEDAVMVGD-AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred HHHHHcCCChhheEEEcC-CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 333444334567999999 999999999999963 22 21 2233455678888877777765543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=97.76 E-value=4.3e-05 Score=77.62 Aligned_cols=52 Identities=17% Similarity=0.254 Sum_probs=48.4
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccc
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGAT 108 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~ 108 (703)
.++...+..++++++++|||+||+++++++.++++++ +|+|+++|+++++|+
T Consensus 179 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~-~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 179 ISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRL-AKNGIIVKNLSALEA 230 (230)
T ss_dssp CHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH-HHTTEEESSTTHHHH
T ss_pred cccccccccccceeeeecccceeehHHHHHHHHHHHH-HHCCEEEeCcccccC
Confidence 3778899999999999999999999999999999999 999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00019 Score=74.68 Aligned_cols=137 Identities=11% Similarity=0.123 Sum_probs=83.3
Q ss_pred cccHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCc-eeee--chh-hhccC------------------
Q 044228 299 REEIKSTVEALRN-AGVRIILVSEDELLAVTEVACELGNFRPESND-IALE--GEQ-FRELN------------------ 355 (703)
Q Consensus 299 r~~~~~~I~~l~~-agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~-~vi~--g~~-l~~~~------------------ 355 (703)
-+++.++|+.|++ .|++++++||+....+..+.+.+++.-...++ .+.+ +.. ...+.
T Consensus 38 ~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~~~ 117 (266)
T PRK10187 38 PDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALAQL 117 (266)
T ss_pred CHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhccC
Confidence 5788899999998 79999999999999998888766642111111 1110 000 00000
Q ss_pred ----------------------HHHHHHhh-------ccCc-----eEEEeCh--hhHHHHHHHHHhC----CCEEEEEe
Q 044228 356 ----------------------STERMAKL-------DSMT-----LMGSCLA--ADKLLLVQTAKEK----GHVVAFFG 395 (703)
Q Consensus 356 ----------------------~~~~~~~~-------~~~~-----v~~r~~P--~~K~~iv~~lq~~----g~~v~~iG 395 (703)
++.+.++. .... -+-.+.| .+|...++.+.+. +..++++|
T Consensus 118 pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~G 197 (266)
T PRK10187 118 PGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVG 197 (266)
T ss_pred CCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEc
Confidence 01111111 0011 1222333 4677777766554 35789999
Q ss_pred CCCCCCHHHHhhC----CcceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 396 GSSTRDTPALKEA----DVGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 396 D~G~ND~~al~~A----dvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
| +.||.+|++.+ +.||+|| ++. ..|++.+.+...+...+.
T Consensus 198 D-~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~~~~v~~~L~ 241 (266)
T PRK10187 198 D-DLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAGVPDVWSWLE 241 (266)
T ss_pred C-CccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCCHHHHHHHHH
Confidence 9 99999999999 9999999 454 346777775555554443
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00036 Score=79.72 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
+.+.++|++|+++|+.+++.||+....+..+++++|+..
T Consensus 436 ~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 436 STALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 467899999999999999999999999999999999753
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0005 Score=70.98 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=37.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
-+.+.++|++|+++||.+++.||........+.+++|+..+
T Consensus 20 ~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 20 YGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 45688999999999999999999999999999999998754
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00023 Score=74.36 Aligned_cols=124 Identities=21% Similarity=0.221 Sum_probs=81.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.++++.|+++|+++.++|+.+...+..+.++.|+... ...++.+++.. ...-.|+--.
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~--f~~i~~~d~~~----------------~~Kp~p~~~~ 164 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY--FRWIIGGDTLP----------------QKKPDPAALL 164 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh--CeEEEecCCCC----------------CCCCCcHHHH
Confidence 79999999999999999999999999999988888888642 11222222110 0011111112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC--C-CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE--N-KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~--~-~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +.||+.+.+.|++. +++. . ...+.....+|+++.++..+.+++.
T Consensus 165 ~~~~~~g~~~~~~l~IGD-~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 165 FVMKMAGVPPSQSLFVGD-SRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCA 230 (272)
T ss_pred HHHHHhCCChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHh
Confidence 222332223467999999 99999999999983 4442 1 1222344578888887777776654
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00024 Score=71.28 Aligned_cols=123 Identities=16% Similarity=0.116 Sum_probs=82.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|+++|+++.++|+.....+..+.+..|+... ...++.+++.. ...-.|+--.
T Consensus 84 ~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~Kp~p~~~~ 145 (214)
T PRK13288 84 YETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF--FDVVITLDDVE----------------HAKPDPEPVL 145 (214)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc--eeEEEecCcCC----------------CCCCCcHHHH
Confidence 78999999999999999999999999999999999998752 12222222110 0111233223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc---eecCCCc-chHHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG---ITEENKC-TEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG---Ia~~~~~-~~~a~~aad~vl~~~~~l~~~i 440 (703)
.+.+.+.-....+++||| +.+|+.+-++|++- +.-|... .+.....+|+++.++..+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~iGD-s~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAKPEEALMVGD-NHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred HHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 344444333467899999 99999999999984 3223111 1233445788777777776654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00027 Score=70.65 Aligned_cols=119 Identities=18% Similarity=0.191 Sum_probs=78.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh--hh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--AD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P--~~ 376 (703)
.+++.+.++.|+++|+++.++|+.+...+..+.+..|+... ...++.+++. .+..| +-
T Consensus 87 ~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~Kp~p~~ 146 (213)
T TIGR01449 87 FPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY--FSVLIGGDSL------------------AQRKPHPDP 146 (213)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh--CcEEEecCCC------------------CCCCCChHH
Confidence 89999999999999999999999999999999999998652 1222222211 11122 21
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cCC-Cc--chHHhhccchhhcccccHHH
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EEN-KC--TEMARECSDIVISTVGSLLP 438 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~~-~~--~~~a~~aad~vl~~~~~l~~ 438 (703)
=....+.+.-....++++|| ..||+.+.++|++-.. +.. .+ .+.....+|+++.++..+..
T Consensus 147 ~~~~~~~~~~~~~~~~~igD-s~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 147 LLLAAERLGVAPQQMVYVGD-SRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HHHHHHHcCCChhHeEEeCC-CHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 12223333323457999999 9999999999998643 421 11 12223457887766665544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00065 Score=68.55 Aligned_cols=116 Identities=14% Similarity=0.101 Sum_probs=77.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++.|+++.++|+........+.+..|+... ...++.+++.. ...|.-.
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~------------------~~Kp~~~- 152 (222)
T PRK10826 94 LPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDY--FDALASAEKLP------------------YSKPHPE- 152 (222)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhc--ccEEEEcccCC------------------CCCCCHH-
Confidence 78999999999999999999999999999999999998763 22233332210 1112111
Q ss_pred HHHHHHHhCC---CEEEEEeCCCCCCHHHHhhCCccee-cCCCcc---hHHhhccchhhcccccHH
Q 044228 379 LLVQTAKEKG---HVVAFFGGSSTRDTPALKEADVGIT-EENKCT---EMARECSDIVISTVGSLL 437 (703)
Q Consensus 379 ~iv~~lq~~g---~~v~~iGD~G~ND~~al~~AdvGIa-~~~~~~---~~a~~aad~vl~~~~~l~ 437 (703)
-+.+.+++.| +.++++|| ..||+.+-++|++... +. .+. +.-...+|.++.++..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~igD-s~~Di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALED-SFNGMIAAKAARMRSIVVP-APEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcC-ChhhHHHHHHcCCEEEEec-CCccCchhhhhhhheeccCHHHHh
Confidence 2333333333 56899999 9999999999998644 33 221 122234677776666654
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00094 Score=67.83 Aligned_cols=125 Identities=12% Similarity=0.070 Sum_probs=84.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|++.|+++.++|+.+...+..+-+..|+... ...++.+++.. ...-.|+-=.
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR--CAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc--ccEEEecCcCC----------------CCCCCHHHHH
Confidence 79999999999999999999999999888888888888652 22333332110 1112333333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce-ecCC-Cc---chHHhhccchhhcccccHHHHHhc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TEEN-KC---TEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI-a~~~-~~---~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
.+.+.+.-..+.++|||| +.||+.+-+.|++.. ++.. .. .......+|+++.++..+.+.+.|
T Consensus 159 ~~~~~l~~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVAPTDCVYVGD-DERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPATW 226 (229)
T ss_pred HHHHHhCCChhhEEEeCC-CHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHhcC
Confidence 444445444577999999 999999999999863 3321 11 112234588888887777666544
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00091 Score=68.75 Aligned_cols=116 Identities=20% Similarity=0.178 Sum_probs=69.7
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----CCceeeechhhhcc-----------C------------
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGEQFREL-----------N------------ 355 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-----~~~~vi~g~~l~~~-----------~------------ 355 (703)
+.++...+.++.++++||++.+.+..+.++.++..|+ ....+..|..+... .
T Consensus 26 ~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~ 105 (247)
T PF05116_consen 26 ELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELP 105 (247)
T ss_dssp HHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHC
T ss_pred HHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhh
Confidence 4444445789999999999999999999999987651 12222222211100 0
Q ss_pred ---------------------------HHHHHHhhccCceEE----------EeCh--hhHHHHHHHHHhC----CCEEE
Q 044228 356 ---------------------------STERMAKLDSMTLMG----------SCLA--ADKLLLVQTAKEK----GHVVA 392 (703)
Q Consensus 356 ---------------------------~~~~~~~~~~~~v~~----------r~~P--~~K~~iv~~lq~~----g~~v~ 392 (703)
-+++.+.+....+-+ ...| ..|...++.++++ .+.|+
T Consensus 106 ~l~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl 185 (247)
T PF05116_consen 106 GLRPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVL 185 (247)
T ss_dssp CEEEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEE
T ss_pred CcccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 022333332222222 2223 5688888888875 24577
Q ss_pred EEeCCCCCCHHHHhhCCcceecCCCcchH
Q 044228 393 FFGGSSTRDTPALKEADVGITEENKCTEM 421 (703)
Q Consensus 393 ~iGD~G~ND~~al~~AdvGIa~~~~~~~~ 421 (703)
++|| +.||.+||..++-||.++ |+.+.
T Consensus 186 ~aGD-SgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 186 VAGD-SGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp EEES-SGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred EEeC-CCCcHHHHcCcCCEEEEc-CCCHH
Confidence 7899 999999999999999999 56665
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0031 Score=64.87 Aligned_cols=54 Identities=13% Similarity=0.241 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCC---CCCCHHHHhhC-CcceecCCCcchHHhhccchh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGS---STRDTPALKEA-DVGITEENKCTEMARECSDIV 429 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~---G~ND~~al~~A-dvGIa~~~~~~~~a~~aad~v 429 (703)
.+|..-++.|.+..+.|+++||. |.||.+||+.| -.|++++ ++.+..+..+.++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 45777777776666789999993 47999999976 5778887 7999988776654
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0017 Score=67.80 Aligned_cols=121 Identities=15% Similarity=0.153 Sum_probs=80.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|+++.++|+.+...+..+-+.+|+... ...++.++... ..|+-=.
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~--F~~vi~~~~~~-------------------~k~~~~~ 202 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSL--FSVVQAGTPIL-------------------SKRRALS 202 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhh--eEEEEecCCCC-------------------CCHHHHH
Confidence 78999999999999999999999999999999999998753 22233322110 0111111
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce-ecCC-Ccch--HHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TEEN-KCTE--MARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI-a~~~-~~~~--~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+++.++-....+++||| +.+|+.+-++|++-. ++.. .... .....+|+++.++..+...+.
T Consensus 203 ~~l~~~~~~p~~~l~IGD-s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 203 QLVAREGWQPAAVMYVGD-ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVT 268 (273)
T ss_pred HHHHHhCcChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHH
Confidence 122222223457999999 999999999999853 3321 1122 233458888877777776553
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0031 Score=75.18 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhC---CcceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK--GHVVAFFGGSSTRDTPALKEA---DVGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~--g~~v~~iGD~G~ND~~al~~A---dvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+|...++.+.+. ...++++|| +.||.+|++.+ +.+|+|| ++ +.+|++.+.+-..+.++++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD-~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGD-DTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQREVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECC-CCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCHHHHHHHHH
Confidence 5688888888764 258999999 99999999986 5788888 43 4578888885555665554
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0014 Score=67.76 Aligned_cols=121 Identities=15% Similarity=0.119 Sum_probs=81.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|+++|+++.++|+.....+..+-+.+|+... ...++.+++... ..-.|+-=.
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~~----------------~KP~Pe~~~ 172 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVYR----------------GKPDPEMFM 172 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCCC----------------CCCCHHHHH
Confidence 78999999999999999999999999999999999998753 334554443211 111222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHHhhccchhhcccccHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMARECSDIVISTVGSLLP 438 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a~~aad~vl~~~~~l~~ 438 (703)
...+.+.-....++|||| ..+|+.+-++|++- |++.+.........+|+++.+++.+..
T Consensus 173 ~a~~~l~~~p~~~l~IgD-s~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~ 232 (260)
T PLN03243 173 YAAERLGFIPERCIVFGN-SNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSV 232 (260)
T ss_pred HHHHHhCCChHHeEEEcC-CHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHH
Confidence 333333334467999999 99999999999984 344322333333356777666655543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0026 Score=63.20 Aligned_cols=37 Identities=32% Similarity=0.507 Sum_probs=33.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG 335 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g 335 (703)
.+++.++|++|++.|++++++||+....+..+.++++
T Consensus 19 ~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 19 SPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 5788899999999999999999999999999988744
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0023 Score=66.04 Aligned_cols=92 Identities=14% Similarity=0.061 Sum_probs=65.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.+.++.|+++|+++.++|+.....+..+-+..|+.... ...++.+++.. +..| +..
T Consensus 101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~------------------~~KP-~p~ 160 (253)
T TIGR01422 101 IPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP------------------AGRP-APW 160 (253)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC------------------CCCC-CHH
Confidence 789999999999999999999999999999998888886521 12333333211 1122 122
Q ss_pred HHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.+.+.+++. .+.+++||| ..+|+.+=+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGD-s~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGD-TVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECC-cHHHHHHHHHCCCe
Confidence 233444433 345999999 99999999999984
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0036 Score=62.66 Aligned_cols=105 Identities=14% Similarity=0.108 Sum_probs=73.6
Q ss_pred cccHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVE-ALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~-~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
+|++.+.|+ .++++|++++++|+-....+..+|+..++... ..++ |.+++...... + .=..|.-++|
T Consensus 96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~~gg~----~----~g~~c~g~~K 163 (210)
T TIGR01545 96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERGNGGW----V----LPLRCLGHEK 163 (210)
T ss_pred CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEeCCce----E----cCccCCChHH
Confidence 799999995 78889999999999999999999999665431 1122 22222100000 0 0123566889
Q ss_pred HHHHHHHHh-CCCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 378 LLLVQTAKE-KGHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 378 ~~iv~~lq~-~g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
..-++..-. ......+-|| ..||.|||+.||..++++.
T Consensus 164 v~rl~~~~~~~~~~~~aYsD-S~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSD-SKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred HHHHHHHhCCChhheEEecC-CcccHHHHHhCCCcEEECc
Confidence 887765432 2344567899 9999999999999999963
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0049 Score=61.75 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=73.8
Q ss_pred cccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE-EEeChhh
Q 044228 299 REEIKSTV-EALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM-GSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I-~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~-~r~~P~~ 376 (703)
+|++.+.| +.+++.|++++++|+-....+..+++.+|+... ..++ |.+++.. ..-.+. ..|..++
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~~i-~t~l~~~---------~tg~~~g~~c~g~~ 163 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VNLI-ASQMQRR---------YGGWVLTLRCLGHE 163 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---CceE-EEEEEEE---------EccEECCccCCChH
Confidence 68999999 678889999999999999999999999996321 1122 2222210 000011 1356688
Q ss_pred HHHHHHHH-HhCCCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 377 KLLLVQTA-KEKGHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 377 K~~iv~~l-q~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
|..-++.. ........+-|| ..||.|||+.|+-+++++.
T Consensus 164 K~~~l~~~~~~~~~~~~aY~D-s~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 164 KVAQLERKIGTPLRLYSGYSD-SKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred HHHHHHHHhCCCcceEEEecC-CcccHHHHHhCCCCEEECc
Confidence 98877754 333445567899 9999999999999999963
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0032 Score=64.76 Aligned_cols=118 Identities=11% Similarity=0.025 Sum_probs=80.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++.|+++.++|+-....+...-+.+|+... ...++.+++... ..-.|+--.
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF--FQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh--CcEEEecCcCCC----------------CCCChHHHH
Confidence 78999999999999999999999999999999999998753 234444443211 112232223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC--CCcchHHhhccchhhccccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE--NKCTEMARECSDIVISTVGS 435 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~--~~~~~~a~~aad~vl~~~~~ 435 (703)
...+.++-....+++||| ..+|+.+=++|++- |++. ....+.....+|+++.++..
T Consensus 172 ~a~~~~~~~~~~~l~vgD-s~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 172 KALEVLKVSKDHTFVFED-SVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHHHhCCChhHEEEEcC-CHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 334444434567999999 99999999999985 3342 11112223467887775554
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0023 Score=64.43 Aligned_cols=123 Identities=17% Similarity=0.156 Sum_probs=79.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+|+.+.++.|+++|+++.++|+-....+..+.+..|+...+....++.+.+.. ..+-.|+-=.
T Consensus 89 ~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~----------------~~KP~p~~~~ 152 (220)
T TIGR03351 89 LPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA----------------AGRPAPDLIL 152 (220)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC----------------CCCCCHHHHH
Confidence 899999999999999999999999999999999999987211123333333221 0111222112
Q ss_pred HHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcce--ecCCCcc----hHHhhccchhhcccccHHHH
Q 044228 379 LLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVGI--TEENKCT----EMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 379 ~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGI--a~~~~~~----~~a~~aad~vl~~~~~l~~~ 439 (703)
...+.+.-. ...++++|| +.+|+.+-++|++.. ++. .+. ......+|+++.+++.+..+
T Consensus 153 ~a~~~~~~~~~~~~~~igD-~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 153 RAMELTGVQDVQSVAVAGD-TPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred HHHHHcCCCChhHeEEeCC-CHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 222222222 357999999 999999999999986 332 221 12223467776666655543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0041 Score=62.56 Aligned_cols=118 Identities=12% Similarity=0.071 Sum_probs=75.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.++++.|+++|+++.++|+.+...+...-+..|+.. ...++.+++.. ...-.|+-=.
T Consensus 85 ~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~----------------~~KP~p~~~~ 145 (218)
T PRK11587 85 LPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK----------------RGKPEPDAYL 145 (218)
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc----------------CCCCCcHHHH
Confidence 7999999999999999999999988777666666777743 22344433221 0111222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHHhhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMARECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a~~aad~vl~~~~~l 436 (703)
...+.+.-..+.+++||| ..+|+.+=+.|++- |++...........+|+++.+++.+
T Consensus 146 ~~~~~~g~~p~~~l~igD-s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 146 LGAQLLGLAPQECVVVED-APAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred HHHHHcCCCcccEEEEec-chhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhe
Confidence 223333333568999999 99999999999984 5565222222334567766655443
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0034 Score=65.35 Aligned_cols=122 Identities=13% Similarity=0.104 Sum_probs=79.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-||+.++++.|++.|+++.++||.....+..+-+..|+.... ...++.+++.. ...| +..
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~~------------------~~KP-~p~ 162 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDVP------------------AGRP-YPW 162 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcCC------------------CCCC-ChH
Confidence 689999999999999999999999998888887777765420 12232222210 1122 112
Q ss_pred HHHHHHHhCC----CEEEEEeCCCCCCHHHHhhCCc---ceecCCCc------------------------chHHhhccc
Q 044228 379 LLVQTAKEKG----HVVAFFGGSSTRDTPALKEADV---GITEENKC------------------------TEMARECSD 427 (703)
Q Consensus 379 ~iv~~lq~~g----~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~------------------------~~~a~~aad 427 (703)
-+.+.+++.| ..++|||| +.+|+.+=+.|++ |+.-|... .+.....+|
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~ 241 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDD-TVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAH 241 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcC-cHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 2334444432 56999999 9999999999998 33333110 122234578
Q ss_pred hhhcccccHHHHHh
Q 044228 428 IVISTVGSLLPILK 441 (703)
Q Consensus 428 ~vl~~~~~l~~~i~ 441 (703)
+++.++..+...+.
T Consensus 242 ~vi~~~~~l~~~l~ 255 (267)
T PRK13478 242 YVIDTIADLPAVIA 255 (267)
T ss_pred eehhhHHHHHHHHH
Confidence 88887777766653
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0048 Score=61.02 Aligned_cols=90 Identities=12% Similarity=-0.005 Sum_probs=65.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.++++++++.|++.|+++.++||.....+..+.+.+|+... ...++.+++ +..+-.|+--.
T Consensus 108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~~~~~~~-----------------~~~KP~p~~~~ 168 (197)
T TIGR01548 108 LLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL--FPVQIWMED-----------------CPPKPNPEPLI 168 (197)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh--CCEEEeecC-----------------CCCCcCHHHHH
Confidence 66779999999999999999999999999999999998753 223333322 11123344434
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEA 408 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~A 408 (703)
...+.+.-....+++||| +.+|+.+-++|
T Consensus 169 ~~~~~~~~~~~~~i~vGD-~~~Di~aA~~a 197 (197)
T TIGR01548 169 LAAKALGVEACHAAMVGD-TVDDIITGRKA 197 (197)
T ss_pred HHHHHhCcCcccEEEEeC-CHHHHHHHHhC
Confidence 455555545567999999 99999886654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0099 Score=55.74 Aligned_cols=107 Identities=17% Similarity=0.237 Sum_probs=81.6
Q ss_pred HHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee--cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 261 LIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL--REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 261 ~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~--r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
..+.+..+|.|.+.+-.++ +++.--.- -|++++-+++++++|+++.++|-.++..+...++.+|+.-
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-----------TLv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-----------TLVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-----------ceecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 3567889999999988877 55544444 7788888999999999999999999999999999999986
Q ss_pred CCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCC
Q 044228 339 PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEK---GHVVAFFGGSST-RDTPALKEAD 409 (703)
Q Consensus 339 ~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~---g~~v~~iGD~G~-ND~~al~~Ad 409 (703)
++--..|-.++ +-+++++. .+.|+|+|| .. .|+-+=+.|+
T Consensus 88 -----------------------------i~~A~KP~~~~-fr~Al~~m~l~~~~vvmVGD-qL~TDVlggnr~G 131 (175)
T COG2179 88 -----------------------------IYRAKKPFGRA-FRRALKEMNLPPEEVVMVGD-QLFTDVLGGNRAG 131 (175)
T ss_pred -----------------------------eecccCccHHH-HHHHHHHcCCChhHEEEEcc-hhhhhhhcccccC
Confidence 55555666554 55566654 568999999 44 4665544443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.011 Score=56.17 Aligned_cols=100 Identities=11% Similarity=0.154 Sum_probs=65.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVT---EVACEL---G--NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~---~ia~~~---g--i~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
.+++++++++++++|++++++||+....+. ...+++ | +.. ..++.....+...... .+..
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~---g~li~~~g~~~~~~~~---------e~i~ 96 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH---GPVLLSPDRLFAALHR---------EVIS 96 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC---ceEEEcCCcchhhhhc---------cccc
Confidence 789999999999999999999999988874 444442 3 322 1223222221100000 1222
Q ss_pred EeChhhHHHHHHHHHh-----CCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 371 SCLAADKLLLVQTAKE-----KGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~-----~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
+-.-+.|.+.++.+++ ....++.+|| +.+|+.+.+++++-
T Consensus 97 ~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn-~~~D~~~y~~~gi~ 141 (157)
T smart00775 97 KKPEVFKIACLRDIKSLFPPQGNPFYAGFGN-RITDVISYSAVGIP 141 (157)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCC-CchhHHHHHHcCCC
Confidence 3223458888888877 3467778999 99999999988764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.011 Score=63.94 Aligned_cols=67 Identities=18% Similarity=0.208 Sum_probs=48.9
Q ss_pred EeChh---hHHHHHHHHHhC-C-----C-EEEEEeCCCCCCHHHHhh-----CCcceecCCCcchHHhhccchhhccccc
Q 044228 371 SCLAA---DKLLLVQTAKEK-G-----H-VVAFFGGSSTRDTPALKE-----ADVGITEENKCTEMARECSDIVISTVGS 435 (703)
Q Consensus 371 r~~P~---~K~~iv~~lq~~-g-----~-~v~~iGD~G~ND~~al~~-----AdvGIa~~~~~~~~a~~aad~vl~~~~~ 435 (703)
.+.|. +|...++.+.+. | . .++++|| +.||..|++. +++||+|+ ++.... .|++.+.+-..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGD-D~TDedmF~~L~~~~~G~~I~Vg-n~~~~t--~A~y~L~dp~e 368 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGD-DRTDEDAFKVLREGNRGYGILVS-SVPKES--NAFYSLRDPSE 368 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECC-CchHHHHHHhhhccCCceEEEEe-cCCCCc--cceEEcCCHHH
Confidence 45553 898888887654 2 1 2589999 9999999996 58999998 455433 57888877666
Q ss_pred HHHHHh
Q 044228 436 LLPILK 441 (703)
Q Consensus 436 l~~~i~ 441 (703)
+...++
T Consensus 369 V~~~L~ 374 (384)
T PLN02580 369 VMEFLK 374 (384)
T ss_pred HHHHHH
Confidence 666664
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0064 Score=58.87 Aligned_cols=123 Identities=9% Similarity=-0.002 Sum_probs=69.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHH--------HHHHHHHHcCCCCCCCCceeeechh-hhccCHHHHHHhhccCceE
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELL--------AVTEVACELGNFRPESNDIALEGEQ-FRELNSTERMAKLDSMTLM 369 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~--------ta~~ia~~~gi~~~~~~~~vi~g~~-l~~~~~~~~~~~~~~~~v~ 369 (703)
.|+++++++.|++.|+++.++|+.+.. ......+..|+... +.+.. ..+ . .-.
T Consensus 30 ~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~------~~~~~~~~~-----------~-~~~ 91 (173)
T PRK06769 30 FPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI------YLCPHKHGD-----------G-CEC 91 (173)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE------EECcCCCCC-----------C-CCC
Confidence 899999999999999999999987631 12233444555431 10000 000 0 000
Q ss_pred EEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCC-Ccch--------HHhhccchhhcccccHHHH
Q 044228 370 GSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEEN-KCTE--------MARECSDIVISTVGSLLPI 439 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~-~~~~--------~a~~aad~vl~~~~~l~~~ 439 (703)
..-.|+-=.++.+.+....+.++|||| ..+|+.+=++|++- |++.. .+.+ .....+|+++.++..+...
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD-~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~ 170 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGD-RWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNW 170 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcC-CHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHH
Confidence 111222223333444333467999999 99999999999985 33431 1221 1123467776666666554
Q ss_pred H
Q 044228 440 L 440 (703)
Q Consensus 440 i 440 (703)
+
T Consensus 171 l 171 (173)
T PRK06769 171 I 171 (173)
T ss_pred H
Confidence 3
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0047 Score=62.72 Aligned_cols=90 Identities=19% Similarity=0.213 Sum_probs=63.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE----LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~----~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++++.++.+++.|+++.++||+. ..|+..+.+..|+........++.|+.. .-
T Consensus 116 ~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---------------------~K 174 (237)
T PRK11009 116 KEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---------------------GQ 174 (237)
T ss_pred hHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------CC
Confidence 6789999999999999999999964 6699999999999432112233333210 11
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eec
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITE 414 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~ 414 (703)
.+|.. .+++.+ .++++|| ..+|..+-++|++- |++
T Consensus 175 ~~K~~---~l~~~~-i~I~IGD-s~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 175 YTKTQ---WLKKKN-IRIFYGD-SDNDITAAREAGARGIRI 210 (237)
T ss_pred CCHHH---HHHhcC-CeEEEcC-CHHHHHHHHHcCCcEEEE
Confidence 33444 344444 4888999 99999999999984 443
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0068 Score=61.63 Aligned_cols=87 Identities=20% Similarity=0.217 Sum_probs=63.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSED----ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++++.++.++++|+++.++|+. ...++..+.+.+|+... ...++.++... .-.|
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~------------------~~Kp 175 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG------------------QYQY 175 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC------------------CCCC
Confidence 556999999999999999999998 67799999999999752 23333333211 0112
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
+|. ..+++.| .++|+|| ..||+.+-++|++-
T Consensus 176 -~~~---~~l~~~~-i~i~vGD-s~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 -TKT---QWIQDKN-IRIHYGD-SDNDITAAKEAGAR 206 (237)
T ss_pred -CHH---HHHHhCC-CeEEEeC-CHHHHHHHHHCCCC
Confidence 232 2345555 4789999 99999999999884
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0071 Score=65.50 Aligned_cols=118 Identities=16% Similarity=0.136 Sum_probs=79.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+|+.+.++.|+++|+++.++|+.+...+..+-+..|+... ...++.+++.. ...-.|+-=.
T Consensus 218 ~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~----------------~~KP~Peifl 279 (381)
T PLN02575 218 RTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY----------------RGKPDPEMFI 279 (381)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC----------------CCCCCHHHHH
Confidence 78999999999999999999999999999999999998753 23333333221 0011222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHH-hhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMA-RECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a-~~aad~vl~~~~~l 436 (703)
...+.+.-....++|+|| ..+|+.|-+.|++- |++. .+.+.. ...+|+++.++..+
T Consensus 280 ~A~~~lgl~Peecl~IGD-S~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s~~EL 337 (381)
T PLN02575 280 YAAQLLNFIPERCIVFGN-SNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRRLDEL 337 (381)
T ss_pred HHHHHcCCCcccEEEEcC-CHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECCHHHH
Confidence 334444434678999999 99999999999985 3454 222222 22467766655554
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.012 Score=57.50 Aligned_cols=139 Identities=19% Similarity=0.241 Sum_probs=87.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhh-----------------hccCHHHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQF-----------------RELNSTERMA 361 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l-----------------~~~~~~~~~~ 361 (703)
-||+.++++.|++. ...+++|-.-.+-+..+|+.+|+...+.++.-++=++. ..+..+++.+
T Consensus 85 vPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelfe 163 (315)
T COG4030 85 VPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELFE 163 (315)
T ss_pred CCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHHH
Confidence 58899999988876 44556666677788999999999764222111111100 0111222222
Q ss_pred hhccCceEEEeChhhHHHHHHHHH---------------hC---CCEEEEEeCCCCCCHHHHhhCCc--ceecCCCcchH
Q 044228 362 KLDSMTLMGSCLAADKLLLVQTAK---------------EK---GHVVAFFGGSSTRDTPALKEADV--GITEENKCTEM 421 (703)
Q Consensus 362 ~~~~~~v~~r~~P~~K~~iv~~lq---------------~~---g~~v~~iGD~G~ND~~al~~Adv--GIa~~~~~~~~ 421 (703)
.+.. +|.|..|..-.++++.++ +. ....+++|| .+.|+.||+.+.= |+|+.-||.+-
T Consensus 164 ~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGD-SItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 164 KLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGD-SITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecC-cccchHHHHHhhccCceEEEecCCcc
Confidence 2222 566766655444444443 32 235678999 9999999998753 36655578888
Q ss_pred Hhhccchhhc--ccccHHHHHh
Q 044228 422 ARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 422 a~~aad~vl~--~~~~l~~~i~ 441 (703)
|...||+.+. +...+..+|.
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 8888998877 6666666665
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.019 Score=52.61 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=61.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC--------HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE--------LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~--------~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
.+++.++++.|+++|+++.++|+.. ......+.+.+|+... .....+ . ..
T Consensus 27 ~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~---~~~~~~-~------------------~~ 84 (132)
T TIGR01662 27 YPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID---VLYACP-H------------------CR 84 (132)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE---EEEECC-C------------------CC
Confidence 7999999999999999999999988 7778888888888531 111111 0 00
Q ss_pred EeChhhHHHHHHHHH-hCCCEEEEEeCCC-CCCHHHHhhCCc
Q 044228 371 SCLAADKLLLVQTAK-EKGHVVAFFGGSS-TRDTPALKEADV 410 (703)
Q Consensus 371 r~~P~~K~~iv~~lq-~~g~~v~~iGD~G-~ND~~al~~Adv 410 (703)
.-.|+-=..+.+.++ -..+.++|+|| + .+|+.+-+.|++
T Consensus 85 KP~~~~~~~~~~~~~~~~~~~~v~IGD-~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 85 KPKPGMFLEALKRFNEIDPEESVYVGD-QDLTDLQAAKRAGL 125 (132)
T ss_pred CCChHHHHHHHHHcCCCChhheEEEcC-CCcccHHHHHHCCC
Confidence 111222223344442 33467999999 8 799999999876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.012 Score=58.06 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=64.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK- 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K- 377 (703)
.|++.++++.|+++|+++.++|+-+......+.+.+|+... ...++..++.. ...|...
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~~------------------~~KP~~~~ 153 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP--FDAVLSADAVR------------------AYKPAPQV 153 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh--hheeEehhhcC------------------CCCCCHHH
Confidence 78999999999999999999999998888888899998642 12233332211 1223211
Q ss_pred -HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 378 -LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 378 -~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
..+.+.+.-....++++|| +.+|+.+-++|++-
T Consensus 154 ~~~~~~~~~~~p~~~~~vgD-~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 154 YQLALEALGVPPDEVLFVAS-NPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHhCCChhhEEEEeC-CHHHHHHHHHCCCc
Confidence 2233333333467899999 99999999999875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.016 Score=59.90 Aligned_cols=41 Identities=15% Similarity=0.302 Sum_probs=38.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
|||+.+.++.|+++|+++.++||-....+..+.++.|+..+
T Consensus 123 ~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~ 163 (277)
T TIGR01544 123 KDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHP 163 (277)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCc
Confidence 99999999999999999999999999999999999998643
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.012 Score=66.22 Aligned_cols=122 Identities=16% Similarity=0.037 Sum_probs=82.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++... .-.|+-=.
T Consensus 332 ~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~--f~~i~~~d~v~~-----------------~~kP~~~~ 392 (459)
T PRK06698 332 YPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW--VTETFSIEQINS-----------------LNKSDLVK 392 (459)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh--cceeEecCCCCC-----------------CCCcHHHH
Confidence 89999999999999999999999999999999999998753 233444432210 11232111
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCC-CcchHHhhccchhhcccccHHHHHhc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEEN-KCTEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~-~~~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
...+.+ ..+.++++|| ..+|+.+-+.|++- |++.. .+.+.....+|+++.++..+.+++..
T Consensus 393 ~al~~l--~~~~~v~VGD-s~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~ 455 (459)
T PRK06698 393 SILNKY--DIKEAAVVGD-RLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILST 455 (459)
T ss_pred HHHHhc--CcceEEEEeC-CHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHH
Confidence 122222 2357999999 99999999999984 44431 12222234578888888777776643
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.011 Score=59.88 Aligned_cols=96 Identities=19% Similarity=0.133 Sum_probs=65.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh--h
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA--D 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~--~ 376 (703)
.+|+.+.++.|+++|+++.++|+-+.+.+...-+..|+... ...++.+++. .+..|+ -
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~iv~s~~~------------------~~~KP~p~~ 154 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH--LDLLLSTHTF------------------GYPKEDQRL 154 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH--CCEEEEeeeC------------------CCCCCCHHH
Confidence 78999999999999999999999888888887788887642 1222222211 111221 1
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc--eecC
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG--ITEE 415 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG--Ia~~ 415 (703)
=....+.+.-..+.++++|| ..+|+.+-++|++. +++.
T Consensus 155 ~~~~~~~~~~~p~~~l~igD-s~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 155 WQAVAEHTGLKAERTLFIDD-SEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred HHHHHHHcCCChHHEEEEcC-CHHHHHHHHHcCCeEEEEEe
Confidence 11222222223457999999 99999999999995 4444
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0092 Score=58.04 Aligned_cols=89 Identities=16% Similarity=0.155 Sum_probs=59.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|+++.++|+... +....+.+|+... -..++++.+.. +..|. ..
T Consensus 89 ~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~--f~~~~~~~~~~------------------~~kp~-p~ 145 (185)
T TIGR01990 89 LPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY--FDAIVDPAEIK------------------KGKPD-PE 145 (185)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh--CcEEEehhhcC------------------CCCCC-hH
Confidence 78999999999999999999997532 4566778887643 23333333221 12221 22
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEK---GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
-+-+.+++. ...+++||| ..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD-~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIED-AQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEec-CHHHHHHHHHcCCE
Confidence 222333333 346899999 99999999999884
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.013 Score=58.78 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=66.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|++++++|+-+...+....+.+|+... ...++.+.+. .+..|...
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~------------------~~~KP~~~- 154 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF--FDAVITSEEE------------------GVEKPHPK- 154 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh--ccEEEEeccC------------------CCCCCCHH-
Confidence 78999999999999999999999988888888888988652 1223333221 11223221
Q ss_pred HHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCcc-eecC
Q 044228 379 LLVQTAKEK---GHVVAFFGGSST-RDTPALKEADVG-ITEE 415 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~-ND~~al~~AdvG-Ia~~ 415 (703)
-+.+.+++. ...+++||| .. +|+.+-++|++- |.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igD-s~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGD-RLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECC-ChHHHHHHHHHCCCEEEEEC
Confidence 233333333 457999999 97 999999999984 4454
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.03 Score=54.53 Aligned_cols=126 Identities=16% Similarity=0.094 Sum_probs=70.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
.||+.+.++.|+++|+++.++|..+. +....+-+..|+.. ..++........
T Consensus 31 ~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f----~~i~~~~~~~~~--------- 97 (181)
T PRK08942 31 IPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL----DGIYYCPHHPED--------- 97 (181)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc----ceEEECCCCCCC---------
Confidence 89999999999999999999998762 11122233445421 011110000000
Q ss_pred ccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcch---HHhhcc--chhhcccccHH
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTE---MARECS--DIVISTVGSLL 437 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~---~a~~aa--d~vl~~~~~l~ 437 (703)
. .-...-.|+--..+.+.+.-..+.++|||| ..+|+.+-+.|++. |++. .|.. .....+ |+++.++..+.
T Consensus 98 -~-~~~~KP~p~~~~~~~~~l~~~~~~~~~VgD-s~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~l~el~ 173 (181)
T PRK08942 98 -G-CDCRKPKPGMLLSIAERLNIDLAGSPMVGD-SLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDSLADLP 173 (181)
T ss_pred -C-CcCCCCCHHHHHHHHHHcCCChhhEEEEeC-CHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecCHHHHH
Confidence 0 000111223223344444334568999999 99999999999984 2332 2221 112234 77776777776
Q ss_pred HHHh
Q 044228 438 PILK 441 (703)
Q Consensus 438 ~~i~ 441 (703)
+.+.
T Consensus 174 ~~l~ 177 (181)
T PRK08942 174 QALK 177 (181)
T ss_pred HHHH
Confidence 6554
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.015 Score=58.46 Aligned_cols=118 Identities=14% Similarity=0.028 Sum_probs=74.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK- 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K- 377 (703)
.+++.+.++.|++. +++.++|+-....+..+.++.|+... -..++.+.+.. ...|...
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~--fd~i~~~~~~~------------------~~KP~~~~ 157 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF--FDDIFVSEDAG------------------IQKPDKEI 157 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh--cCEEEEcCccC------------------CCCCCHHH
Confidence 88999999999999 99999999999998888999998653 12222222110 1123221
Q ss_pred -HHHHHHH-HhCCCEEEEEeCCCC-CCHHHHhhCCcc-eecCC-CcchHHhhccchhhcccccHHH
Q 044228 378 -LLLVQTA-KEKGHVVAFFGGSST-RDTPALKEADVG-ITEEN-KCTEMARECSDIVISTVGSLLP 438 (703)
Q Consensus 378 -~~iv~~l-q~~g~~v~~iGD~G~-ND~~al~~AdvG-Ia~~~-~~~~~a~~aad~vl~~~~~l~~ 438 (703)
...++.+ .-....+++||| .. +|+.+=+.+++- |.... ...+.....+|+++.+++.+..
T Consensus 158 ~~~~~~~~~~~~~~~~v~igD-~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFSKEEVLMIGD-SLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred HHHHHHHhcCCCchheEEECC-CcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 2333333 223457999999 98 899999999973 33321 1221222345555556555544
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.022 Score=55.15 Aligned_cols=92 Identities=21% Similarity=0.168 Sum_probs=61.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|+++|+++.++|+-.... ..+..++|+... ...++.+.+.. ...-.|+-=.
T Consensus 87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 87 LPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC----------------CCCCCHHHHH
Confidence 7899999999999999999999988777 556556888642 22233322210 0111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV 410 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv 410 (703)
.+.+.+.-....++++|| ...|+.+-+++++
T Consensus 148 ~~~~~~~~~~~~~~~vgD-~~~di~aA~~~G~ 178 (183)
T TIGR01509 148 LALKKLGLKPEECLFVDD-SPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHcCCCcceEEEEcC-CHHHHHHHHHcCC
Confidence 333333334578999999 9999999888877
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.02 Score=57.73 Aligned_cols=119 Identities=14% Similarity=0.062 Sum_probs=75.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+ +|+++.++|......+...-+..|+... -..++.+++.. ...|. ..
T Consensus 97 ~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~v~~~~~~~------------------~~KP~-p~ 154 (224)
T PRK09449 97 LPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY--FDLLVISEQVG------------------VAKPD-VA 154 (224)
T ss_pred CccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH--cCEEEEECccC------------------CCCCC-HH
Confidence 789999999999 6899999999888888888888888642 12222222110 11232 12
Q ss_pred HHHHHHHhCC----CEEEEEeCCCC-CCHHHHhhCCcc-eecCCCcch-HHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKG----HVVAFFGGSST-RDTPALKEADVG-ITEENKCTE-MARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g----~~v~~iGD~G~-ND~~al~~AdvG-Ia~~~~~~~-~a~~aad~vl~~~~~l~~~i 440 (703)
-+.+.+++.| +.+++||| .. +|+.+=+.|++- |.+...+.. .....+|+++.++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD-~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGD-NLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcC-CcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 2233333332 57999999 98 799999999985 444311211 11124677776777666554
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.021 Score=60.13 Aligned_cols=120 Identities=14% Similarity=0.088 Sum_probs=72.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|++.|+++.++|+-+......+-+..+.......-.++.+++.. ...-.|+-=.
T Consensus 146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~~~ 209 (286)
T PLN02779 146 RPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDIYN 209 (286)
T ss_pred hhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHHHH
Confidence 789999999999999999999999888877766555322110011122222110 0111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cCCCcc--hHHhhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EENKCT--EMARECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~~~~~--~~a~~aad~vl~~~~~l 436 (703)
.+.+.+.-....+++||| +.+|+.+-++|++... +. .+. ......+|+++.++..+
T Consensus 210 ~a~~~~~~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~-~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 210 LAAETLGVDPSRCVVVED-SVIGLQAAKAAGMRCIVTK-SSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred HHHHHhCcChHHEEEEeC-CHHhHHHHHHcCCEEEEEc-cCCccccccCCCcEEECChhhc
Confidence 333444334567999999 9999999999998644 32 221 11123477777644443
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.027 Score=54.32 Aligned_cols=108 Identities=17% Similarity=0.192 Sum_probs=73.2
Q ss_pred HHhcCCceEEEEEeecCcccccccCcEEE--EEEeecccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCCCCC
Q 044228 265 MEDSGLRPIAFACGQTEVSEIKENGLHLL--ALAGLREEIKSTVEALRNAGVRIILVSEDE-LLAVTEVACELGNFRPES 341 (703)
Q Consensus 265 ~~~~G~r~l~~A~~~l~~~~~~e~~l~~l--G~~~~r~~~~~~I~~l~~agi~v~m~TGD~-~~ta~~ia~~~gi~~~~~ 341 (703)
+.+.|.+.+.+-.++ ++. ....+.+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+..
T Consensus 20 ~~~~~v~~vv~D~Dg-----------tl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~--- 85 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-----------TLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV--- 85 (170)
T ss_pred HHHCCCCEEEEecCC-----------ccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---
Confidence 345788888888765 222 111117899999999999999999999988 677777888888653
Q ss_pred CceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHh---CCCEEEEEeCCCC-CCHHHHhhCCcc-eec
Q 044228 342 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKE---KGHVVAFFGGSST-RDTPALKEADVG-ITE 414 (703)
Q Consensus 342 ~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~---~g~~v~~iGD~G~-ND~~al~~AdvG-Ia~ 414 (703)
......|... .+-+.+++ ....++|||| .. .|+.+=+.|++- |.+
T Consensus 86 --------------------------~~~~~KP~p~-~~~~~l~~~~~~~~~~l~IGD-s~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 86 --------------------------LPHAVKPPGC-AFRRAHPEMGLTSEQVAVVGD-RLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred --------------------------EcCCCCCChH-HHHHHHHHcCCCHHHEEEECC-cchHHHHHHHHcCCeEEEE
Confidence 1111233211 22233333 3456999999 97 799999999983 444
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.012 Score=56.10 Aligned_cols=94 Identities=18% Similarity=0.185 Sum_probs=67.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|+++|++++++|+..........++.|+... ...++...+... ..-.|+-=.
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~~----------------~Kp~~~~~~ 140 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVGS----------------RKPDPDAYR 140 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSSS----------------STTSHHHHH
T ss_pred hhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhhh----------------hhhHHHHHH
Confidence 89999999999999999999999999999999999998732 223333332211 011112223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.+.+.+.-....+++||| ..+|+.+-++|++-
T Consensus 141 ~~~~~~~~~p~~~~~vgD-~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 141 RALEKLGIPPEEILFVGD-SPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHTSSGGGEEEEES-SHHHHHHHHHTTSE
T ss_pred HHHHHcCCCcceEEEEeC-CHHHHHHHHHcCCe
Confidence 344444434567999999 99999999998864
|
... |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.11 Score=50.79 Aligned_cols=46 Identities=24% Similarity=0.282 Sum_probs=37.9
Q ss_pred EEEEEEee-cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 291 HLLALAGL-REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 291 ~~lG~~~~-r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
++++ -+. -+.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 17 TLl~-~~ye~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 17 TLLP-HSYEWQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cccC-CCCCCCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4444 333 567889999999999999999998888888888999987
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.026 Score=53.65 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=70.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-CceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES-NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~-~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
+|+-++.++.+++++++++++|+...--...+-...+=...-. ...+-+...+..-.+ ..+... ....---+|
T Consensus 75 dp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~---h~i~~~---~ds~fG~dK 148 (220)
T COG4359 75 DPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ---HSIKYT---DDSQFGHDK 148 (220)
T ss_pred CccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc---eeeecC---CccccCCCc
Confidence 8999999999999999999999888777766666554111100 001100000000000 000000 001112578
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceec
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE 414 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~ 414 (703)
...|+.+++..+.+.++|| |+.|++|-+.+|+=+|-
T Consensus 149 ~~vI~~l~e~~e~~fy~GD-svsDlsaaklsDllFAK 184 (220)
T COG4359 149 SSVIHELSEPNESIFYCGD-SVSDLSAAKLSDLLFAK 184 (220)
T ss_pred chhHHHhhcCCceEEEecC-CcccccHhhhhhhHhhH
Confidence 9999999999999999999 99999999998887763
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.023 Score=62.31 Aligned_cols=96 Identities=14% Similarity=0.069 Sum_probs=65.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-HcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh--h
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVAC-ELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--A 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~-~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P--~ 375 (703)
.+++.+.++.|++.|+++.++|+.....+....+ ..|+... -..++.+++. .+..| +
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--Fd~ii~~d~v------------------~~~KP~p~ 154 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--FSVIVGGDEV------------------EKGKPSPD 154 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--CCEEEehhhc------------------CCCCCCHH
Confidence 7899999999999999999999998888777655 5777542 2333333321 11222 2
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
-=....+.+.-..+.++++|| ..+|+.+-++|++. |++.
T Consensus 155 ~~~~a~~~lgv~p~~~l~VGD-s~~Di~aA~~aGi~~I~v~ 194 (382)
T PLN02940 155 IFLEAAKRLNVEPSNCLVIED-SLPGVMAGKAAGMEVIAVP 194 (382)
T ss_pred HHHHHHHHcCCChhHEEEEeC-CHHHHHHHHHcCCEEEEEC
Confidence 222333333333567999999 99999999999986 3343
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.019 Score=55.71 Aligned_cols=89 Identities=13% Similarity=0.136 Sum_probs=59.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.++++.|+++|+++.++|+. ..+..+-+.+|+... ...++.+.+. .+..|...
T Consensus 90 ~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~--f~~v~~~~~~------------------~~~kp~~~- 146 (185)
T TIGR02009 90 LPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY--FDAIVDADEV------------------KEGKPHPE- 146 (185)
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH--CCEeeehhhC------------------CCCCCChH-
Confidence 899999999999999999999987 557777788888642 1222222211 11223211
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEK---GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.+-+.+++. .+.+++||| ..+|+.+-+.|++.
T Consensus 147 ~~~~~~~~~~~~~~~~v~IgD-~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVSPNECVVFED-ALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEeC-cHhhHHHHHHCCCe
Confidence 122233333 356889999 99999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.038 Score=53.42 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=64.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSED-ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD-~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.|++.++++.|+++|+++.++|+- ....+..+-+.+|+...... ..+.+.+.. .+.++-.+..|
T Consensus 47 ~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~--------------~~~~~~Fd~-iv~~~~~~~~k 111 (174)
T TIGR01685 47 IKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT--------------VPMHSLFDD-RIEIYKPNKAK 111 (174)
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc--------------ccHHHhcee-eeeccCCchHH
Confidence 899999999999999999999975 88889989888998621000 000000000 01111111112
Q ss_pred --HHHHHHHHhC------CCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 378 --LLLVQTAKEK------GHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 378 --~~iv~~lq~~------g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
..+.+.+.+. ...++|+|| ...|+.+-++|++-..
T Consensus 112 p~~~i~~~~~~~~~~gl~p~e~l~VgD-s~~di~aA~~aGi~~i 154 (174)
T TIGR01685 112 QLEMILQKVNKVDPSVLKPAQILFFDD-RTDNVREVWGYGVTSC 154 (174)
T ss_pred HHHHHHHHhhhcccCCCCHHHeEEEcC-hhHhHHHHHHhCCEEE
Confidence 2334444332 357999999 9999999999998654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.044 Score=57.96 Aligned_cols=102 Identities=14% Similarity=-0.018 Sum_probs=71.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-CCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR-PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~-~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.+++.+.++.|++.|+++.++||....++..+.+.+|+.. . .. .+.|.+. ... .+... --.+-.|+-+
T Consensus 189 ~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~--f~-~i~~~~~----~~~---~~~~~-~~~kp~p~~~ 257 (300)
T PHA02530 189 NPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIW--FD-DLIGRPP----DMH---FQREQ-GDKRPDDVVK 257 (300)
T ss_pred ChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCc--hh-hhhCCcc----hhh---hcccC-CCCCCcHHHH
Confidence 8999999999999999999999999999999999998864 2 00 1111110 000 00000 0123456667
Q ss_pred HHHHHHHHh-CCCEEEEEeCCCCCCHHHHhhCCcce
Q 044228 378 LLLVQTAKE-KGHVVAFFGGSSTRDTPALKEADVGI 412 (703)
Q Consensus 378 ~~iv~~lq~-~g~~v~~iGD~G~ND~~al~~AdvGI 412 (703)
.+.++.+-. ....++|+|| ..+|+.+-+.|++-.
T Consensus 258 ~~~l~~~~~~~~~~~~~vgD-~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 258 EEIFWEKIAPKYDVLLAVDD-RDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHhccCceEEEEEcC-cHHHHHHHHHhCCeE
Confidence 777666533 3378999999 999999999999863
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.051 Score=53.75 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=57.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-|++.++++.|+++|+++.++|+-... .....+.+|+... ...++...+.. ...|+ ..
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~--fd~i~~s~~~~------------------~~KP~-~~ 164 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY--FDFVVTSYEVG------------------AEKPD-PK 164 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh--cceEEeecccC------------------CCCCC-HH
Confidence 689999999999999999999976544 4667777887542 11222221110 01221 12
Q ss_pred HHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCc
Q 044228 379 LLVQTAKEK---GHVVAFFGGSST-RDTPALKEADV 410 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~-ND~~al~~Adv 410 (703)
-+.+.+++. ...+++||| +. +|+.+=++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD-~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGD-SLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECC-CchHHHHHHHHcCC
Confidence 222333333 467999999 97 89998888875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.07 Score=53.68 Aligned_cols=117 Identities=14% Similarity=0.104 Sum_probs=66.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHcCCCCCCCCceeeech--hhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTE-VACELGNFRPESNDIALEGE--QFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~-ia~~~gi~~~~~~~~vi~g~--~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.|++.+.|+.|+++|+++.++||-....... ..+..++... ...++.++ +.. ...-.|+
T Consensus 80 ~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 80 MPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhhcc----------------CCCCCcH
Confidence 7899999999999999999999977654332 2222233221 11222222 110 0011121
Q ss_pred hHHHHHHHHH---hCCCEEEEEeCCCCCCHHHHhhCCcce-ecCC-CcchHHhhccchhhcccc
Q 044228 376 DKLLLVQTAK---EKGHVVAFFGGSSTRDTPALKEADVGI-TEEN-KCTEMARECSDIVISTVG 434 (703)
Q Consensus 376 ~K~~iv~~lq---~~g~~v~~iGD~G~ND~~al~~AdvGI-a~~~-~~~~~a~~aad~vl~~~~ 434 (703)
-=...++.+. -..+.+++||| ...|+.+-++|++-. ++.. .........+|+++.++.
T Consensus 142 ~~~~a~~~~~~~~~~~~~~v~IgD-s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 142 IFLAAARRFEDGPVDPGKVLVFED-APSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred HHHHHHHHhCCCCCCccceEEEec-cHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHh
Confidence 1122333332 22367999999 999999999999953 3431 112112235677766444
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.12 Score=50.14 Aligned_cols=26 Identities=15% Similarity=0.359 Sum_probs=23.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL 324 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~ 324 (703)
.|++.++++.|+++|+++.++|.-+.
T Consensus 28 ~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 28 IDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 78999999999999999999997653
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.086 Score=49.57 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=56.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+-....+....+.. +... ...++..++ +...-.|+-=.
T Consensus 66 ~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~~~~~-----------------~~~Kp~~~~~~ 125 (154)
T TIGR01549 66 IRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLILGSDE-----------------FGAKPEPEIFL 125 (154)
T ss_pred ccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEEecCC-----------------CCCCcCHHHHH
Confidence 578999999999999999999999998888877765 3321 111111111 11111121112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEAD 409 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Ad 409 (703)
.+.+.+.-.. .++++|| ..+|+.+-++|+
T Consensus 126 ~~~~~~~~~~-~~l~iGD-s~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLPP-EVLHVGD-NLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCCC-CEEEEeC-CHHHHHHHHHcc
Confidence 2222222224 7999999 999998887764
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.1 Score=48.91 Aligned_cols=94 Identities=18% Similarity=0.177 Sum_probs=57.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
.|++.++++.|+++|+++.++|..+. ..+..+.+.+|+... ........-.
T Consensus 29 ~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---~~~~~~~~~~----------- 94 (147)
T TIGR01656 29 RPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD---GVLFCPHHPA----------- 94 (147)
T ss_pred cCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee---EEEECCCCCC-----------
Confidence 89999999999999999999998662 345566777887521 0010000000
Q ss_pred ccCceEEEeChhhHHHHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEK---GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~---g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.......|+-+ -+-+.+++. .+.+++||| ...|+.+-+.+++-
T Consensus 95 ---~~~~~~KP~~~-~~~~~~~~~~~~~~e~i~IGD-s~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 ---DNCSCRKPKPG-LILEALKRLGVDASRSLVVGD-RLRDLQAARNAGLA 140 (147)
T ss_pred ---CCCCCCCCCHH-HHHHHHHHcCCChHHEEEEcC-CHHHHHHHHHCCCC
Confidence 00000123211 122223333 457999999 99999998988874
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.16 Score=52.52 Aligned_cols=82 Identities=16% Similarity=0.120 Sum_probs=57.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA---VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
-|++.+.++.|++.|+++.++|+..... ....-+..|+....... ++.|-...
T Consensus 120 ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~------------------------lllr~~~~ 175 (266)
T TIGR01533 120 VAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH------------------------LLLKKDKS 175 (266)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce------------------------EEeCCCCC
Confidence 6889999999999999999999987443 33455668886421111 33333333
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHH
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPAL 405 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al 405 (703)
.|..-.+.+.+.-.+++++|| -.+|....
T Consensus 176 ~K~~rr~~I~~~y~Ivl~vGD-~~~Df~~~ 204 (266)
T TIGR01533 176 SKESRRQKVQKDYEIVLLFGD-NLLDFDDF 204 (266)
T ss_pred CcHHHHHHHHhcCCEEEEECC-CHHHhhhh
Confidence 466666666665567999999 88898653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.36 Score=58.22 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=30.2
Q ss_pred cccHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Q 044228 299 REEIKSTVEAL-RNAGVRIILVSEDELLAVTEVACEL 334 (703)
Q Consensus 299 r~~~~~~I~~l-~~agi~v~m~TGD~~~ta~~ia~~~ 334 (703)
-+++.+++++| ++.|+.|+++||+...+....-..+
T Consensus 618 ~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 618 SSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 45788999997 7789999999999999988876443
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.21 Score=50.26 Aligned_cols=84 Identities=15% Similarity=0.081 Sum_probs=53.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA---VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
-+++.+.++.+++.|++|+++||+.... ...--++.|+..- ..+++.+.+-. ....-+
T Consensus 122 ip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~d~-----------------~~~~~~ 182 (229)
T TIGR01675 122 LPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLEDS-----------------NKTVVT 182 (229)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCCCC-----------------CchHhH
Confidence 5788999999999999999999999755 2222345676531 12222221000 000112
Q ss_pred hHHHHHHHHHhCCC-EEEEEeCCCCCCH
Q 044228 376 DKLLLVQTAKEKGH-VVAFFGGSSTRDT 402 (703)
Q Consensus 376 ~K~~iv~~lq~~g~-~v~~iGD~G~ND~ 402 (703)
-|.+.-+.+.++|+ +++.+|| -.+|.
T Consensus 183 yKs~~R~~l~~~GYrIv~~iGD-q~sDl 209 (229)
T TIGR01675 183 YKSEVRKSLMEEGYRIWGNIGD-QWSDL 209 (229)
T ss_pred HHHHHHHHHHhCCceEEEEECC-ChHHh
Confidence 27777777777776 5667899 88786
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.18 Score=48.37 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=55.5
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHH------------HHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCc
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELL------------AVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMT 367 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~------------ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~ 367 (703)
||+.++++.|+++|+++.++|.-... .+..+.+.+|+.. ..++.+..
T Consensus 45 pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~----------------- 103 (166)
T TIGR01664 45 PEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHA----------------- 103 (166)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCC-----------------
Confidence 89999999999999999999965432 4566778888742 12222211
Q ss_pred eEEEeChh--hHHHHHHHHH--hCCCEEEEEeCCCC--------CCHHHHhhCCcce
Q 044228 368 LMGSCLAA--DKLLLVQTAK--EKGHVVAFFGGSST--------RDTPALKEADVGI 412 (703)
Q Consensus 368 v~~r~~P~--~K~~iv~~lq--~~g~~v~~iGD~G~--------ND~~al~~AdvGI 412 (703)
..++ .|. -=..+.+.+. -..+.++|||| .. +|+.+=++|++-.
T Consensus 104 ~~~~-KP~p~~~~~~~~~~~~~~~~~~~v~VGD-~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLYR-KPMTGMWEYLQSQYNSPIKMTRSFYVGD-AAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCC-CCccHHHHHHHHHcCCCCCchhcEEEEC-CCCCCCCCchhHHHHHHHCCCCc
Confidence 0011 221 1122233332 12357999999 86 6888888887643
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.12 Score=49.28 Aligned_cols=91 Identities=11% Similarity=0.150 Sum_probs=57.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCceeee----chhhhccCHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSED---------------ELLAVTEVACELGNFRPESNDIALE----GEQFRELNSTER 359 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~~~vi~----g~~l~~~~~~~~ 359 (703)
-+++.++++.|+++|+++.++|-- ....+..+.++.|+.- ...++. .++
T Consensus 31 ~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~ii~~~~~~~~~--------- 98 (161)
T TIGR01261 31 EKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---DDVLICPHFPDDN--------- 98 (161)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---eEEEECCCCCCCC---------
Confidence 689999999999999999999974 2345566777777752 111111 010
Q ss_pred HHhhccCceEEEeChhhHHHHHHH-HHhC---CCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 360 MAKLDSMTLMGSCLAADKLLLVQT-AKEK---GHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 360 ~~~~~~~~v~~r~~P~~K~~iv~~-lq~~---g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
..+ ..|. .++++. +++. ...+.|||| +.+|+.+-++|++-..
T Consensus 99 --------~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD-~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 99 --------CDC-RKPK--IKLLEPYLKKNLIDKARSYVIGD-RETDMQLAENLGIRGI 144 (161)
T ss_pred --------CCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeC-CHHHHHHHHHCCCeEE
Confidence 001 1222 222222 2222 356999999 9999999999998543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.11 Score=52.23 Aligned_cols=125 Identities=10% Similarity=0.014 Sum_probs=74.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++++.++.| ++++.++|+.....+...-+..|+...- ...++.+.+...- .-.|+-=.
T Consensus 90 ~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~~~----------------KP~p~~~~ 149 (221)
T PRK10563 90 IAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQRW----------------KPDPALMF 149 (221)
T ss_pred CCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcCCC----------------CCChHHHH
Confidence 67899999888 4999999999988888887888886520 0123333322110 01111112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cC-CCcchHHhhccchhhcccccHHHHHhccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EE-NKCTEMARECSDIVISTVGSLLPILKLGR 444 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~-~~~~~~a~~aad~vl~~~~~l~~~i~~gR 444 (703)
...+.+.-..+.+++||| ..+|+.+=++|++... .. ....+.....++.++.++..+.+.+..+-
T Consensus 150 ~a~~~~~~~p~~~l~igD-s~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 216 (221)
T PRK10563 150 HAAEAMNVNVENCILVDD-SSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELWKARG 216 (221)
T ss_pred HHHHHcCCCHHHeEEEeC-cHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHHHHhc
Confidence 222222222356899999 9999999999998754 31 01222223344555557777776665433
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.12 Score=48.58 Aligned_cols=90 Identities=11% Similarity=-0.011 Sum_probs=63.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
||++.+.++.|+ .++++.++|.-+...+..+-+.+|+... ....++.+++.. +..|.
T Consensus 47 ~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~------------------~~KP~--- 103 (148)
T smart00577 47 RPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV------------------FVKGK--- 103 (148)
T ss_pred CCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc------------------ccCCe---
Confidence 999999999999 5799999999999999999999887531 012333333221 11222
Q ss_pred HHHHHHHh---CCCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 379 LLVQTAKE---KGHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 379 ~iv~~lq~---~g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
+.+.+++ ..+.+.++|| ..+|..+-++|++-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~D-s~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDD-SPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEEC-CHHHhhcCccCEEEec
Confidence 3333433 3568999999 9999998777766554
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.29 Score=44.76 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=32.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcC
Q 044228 299 REEIKSTVEALRNAGVRIILVSED-ELLAVTEVACELG 335 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD-~~~ta~~ia~~~g 335 (703)
.+++.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 31 ~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 31 IKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 789999999999999999999999 7777777767666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.27 Score=52.99 Aligned_cols=95 Identities=11% Similarity=0.063 Sum_probs=58.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSED---------------ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
.|++.+.++.|+++|+++.++|.- ....+..+.+..|+.. ....+....-.+
T Consensus 32 ~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f---d~i~i~~~~~sd---------- 98 (354)
T PRK05446 32 EPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF---DEVLICPHFPED---------- 98 (354)
T ss_pred CcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce---eeEEEeCCcCcc----------
Confidence 899999999999999999999983 2334556667777642 111111000000
Q ss_pred ccCceEEEeChhhHHHHHHHHHh----CCCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKE----KGHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~----~g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
...+| .| |..++..+.+ ....+.|||| +.+|..+-+.|++-..
T Consensus 99 ---~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGD-s~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ---NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGD-RETDVQLAENMGIKGI 145 (354)
T ss_pred ---cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcC-CHHHHHHHHHCCCeEE
Confidence 00111 22 2233333322 2367999999 9999999999998633
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.53 Score=48.12 Aligned_cols=85 Identities=11% Similarity=0.164 Sum_probs=54.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVT--EVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~--~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
-|+++++++.|+++|+++.++|.-....+. ...+++|+..+ ....+++..+..
T Consensus 26 ~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~-~~~~Ii~s~~~~------------------------ 80 (242)
T TIGR01459 26 YPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINAD-LPEMIISSGEIA------------------------ 80 (242)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcc-ccceEEccHHHH------------------------
Confidence 789999999999999999999985554443 55678888641 012222222110
Q ss_pred HHHHHHHHHh---CCCEEEEEeCCCCCCHHHHhhCC
Q 044228 377 KLLLVQTAKE---KGHVVAFFGGSSTRDTPALKEAD 409 (703)
Q Consensus 377 K~~iv~~lq~---~g~~v~~iGD~G~ND~~al~~Ad 409 (703)
...+.+.+++ .+..+.++|| +.+|...+..++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~vGd-~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 VQMILESKKRFDIRNGIIYLLGH-LENDIINLMQCY 115 (242)
T ss_pred HHHHHhhhhhccCCCceEEEeCC-cccchhhhcCCC
Confidence 1122222232 2467999999 999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.2 Score=50.71 Aligned_cols=101 Identities=13% Similarity=0.149 Sum_probs=66.2
Q ss_pred cccHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhc-cCceEEEeCh-
Q 044228 299 REEIKSTVEAL--RNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLD-SMTLMGSCLA- 374 (703)
Q Consensus 299 r~~~~~~I~~l--~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~-~~~v~~r~~P- 374 (703)
-|+.++.++.+ ++.|+++.++|--|..-...+-+.-|+... ...+.+-...-+-.. ...+.+ ..+-|.+|.|
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~--f~~I~TNpa~~~~~G--~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC--FSEIFTNPACFDADG--RLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc--cceEEeCCceecCCc--eEEEeCccCCCCCcCCCc
Confidence 88999999999 457999999999999999999999998653 112222211100000 000000 0012445554
Q ss_pred hhHHHHHHHHHhC----C---CEEEEEeCCCCCCHHH
Q 044228 375 ADKLLLVQTAKEK----G---HVVAFFGGSSTRDTPA 404 (703)
Q Consensus 375 ~~K~~iv~~lq~~----g---~~v~~iGD~G~ND~~a 404 (703)
.=|..+++.+++. | ..|..+|| |.||...
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGD-G~nD~Cp 184 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGD-GRNDFCP 184 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECC-CCCCcCc
Confidence 4699999888765 4 68999999 9999643
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.41 Score=59.40 Aligned_cols=117 Identities=11% Similarity=0.105 Sum_probs=76.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh--
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD-- 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~-- 376 (703)
.||+.+.++.|+++|+++.++|+-....+..+-++.|+... ....++.+++. .+..|+.
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~-~Fd~iv~~~~~------------------~~~KP~Pe~ 223 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLS-MFDAIVSADAF------------------ENLKPAPDI 223 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChh-HCCEEEECccc------------------ccCCCCHHH
Confidence 68999999999999999999999999999888888998521 02233333322 1222321
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCC--cchHHhhccchhhccccc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENK--CTEMARECSDIVISTVGS 435 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~--~~~~a~~aad~vl~~~~~ 435 (703)
=....+.+.-..+.++++|| ..+|+.+-++|++- |++... ..+.....+|+++.++..
T Consensus 224 ~~~a~~~lgv~p~e~v~IgD-s~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~e 284 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIED-ALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGN 284 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcC-CHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHH
Confidence 12233333333567999999 99999999999983 444321 122333456777764444
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.33 Score=46.48 Aligned_cols=101 Identities=15% Similarity=0.087 Sum_probs=72.9
Q ss_pred HHhcCCceEEEEEeecCcccccccCcEEEEEEee--cccHHHHHHHHHHCCC--EEEEEcCC-------CHHHHHHHHHH
Q 044228 265 MEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL--REEIKSTVEALRNAGV--RIILVSED-------ELLAVTEVACE 333 (703)
Q Consensus 265 ~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~--r~~~~~~I~~l~~agi--~v~m~TGD-------~~~ta~~ia~~ 333 (703)
+.+.|.|.+.+-.++ ++..--.- -++..+.+++|++.+. +++++|-- +.+.|..+++.
T Consensus 36 Lk~~Gik~li~DkDN-----------TL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~ 104 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-----------TLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA 104 (168)
T ss_pred hhhcCceEEEEcCCC-----------CCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh
Confidence 778999999888766 22111111 7888999999999977 59999875 47899999999
Q ss_pred cCCCCCCCCceeeechhhhccCHHHHHHhhccCce-EEEeChhhHHHHHHHHHhC-----CCEEEEEeCCCCCCHHHH
Q 044228 334 LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTL-MGSCLAADKLLLVQTAKEK-----GHVVAFFGGSSTRDTPAL 405 (703)
Q Consensus 334 ~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v-~~r~~P~~K~~iv~~lq~~-----g~~v~~iGD~G~ND~~al 405 (703)
+|+.. + +....|.-..++.+.++.+ .+.++||||-=..|+-+=
T Consensus 105 lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~g 153 (168)
T PF09419_consen 105 LGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMG 153 (168)
T ss_pred hCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHh
Confidence 99863 2 2234787777888888765 567999999222355443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.14 Score=52.57 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=49.3
Q ss_pred EEeChhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhC--------CcceecCCCcchHHhhccchhhcccccHH
Q 044228 370 GSCLAADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEA--------DVGITEENKCTEMARECSDIVISTVGSLL 437 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~A--------dvGIa~~~~~~~~a~~aad~vl~~~~~l~ 437 (703)
.+-.+.+|...++.+.+. ...++++|| +.||.+|++.+ ..||+++ .+. .+..|++++.+...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD-~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGD-DITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTGPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcC-CCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCCHHHHH
Confidence 344566898888877654 347899999 99999999998 4778885 232 3456888888766666
Q ss_pred HHHh
Q 044228 438 PILK 441 (703)
Q Consensus 438 ~~i~ 441 (703)
+.+.
T Consensus 237 ~~L~ 240 (244)
T TIGR00685 237 EFLG 240 (244)
T ss_pred HHHH
Confidence 6553
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.95 E-value=1.7 Score=46.98 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=41.2
Q ss_pred HHhcCCceEEEEEeecCcccccccCcEEEEEEe------ecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 044228 265 MEDSGLRPIAFACGQTEVSEIKENGLHLLALAG------LREEIKSTVEALRNAGVRIILVSEDELLAVTEVA 331 (703)
Q Consensus 265 ~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~------~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia 331 (703)
.+....+.+++-|++ +|+-++. +-++..++|++|. .|++++++||+.......+.
T Consensus 106 ~~~~k~~llflD~DG-----------TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 106 ASRGKQIVMFLDYDG-----------TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HhcCCCeEEEEecCC-----------cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 344445666666777 6664443 1678889999999 78999999999999998873
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=91.94 E-value=1.2 Score=46.00 Aligned_cols=41 Identities=22% Similarity=0.195 Sum_probs=32.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA---VTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~~~ 339 (703)
=|++.++|++|+++|++++++||.+..+ .....+++|+...
T Consensus 23 ~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~ 66 (257)
T TIGR01458 23 VPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDIS 66 (257)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 4689999999999999999999977665 4444556787643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.34 Score=48.80 Aligned_cols=94 Identities=14% Similarity=0.109 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC---CCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG---NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g---i~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.+|+.++++.|+++|+++.++|..+......+-+..+ +... +++ .+. ..+...-.|+
T Consensus 97 ypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~~-------------~fd-~~~g~KP~p~ 156 (220)
T TIGR01691 97 YPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FSG-------------YFD-TTVGLKTEAQ 156 (220)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cce-------------EEE-eCcccCCCHH
Confidence 8999999999999999999999988777666655542 2210 000 000 0011111222
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
-=..+.+.+.-..+.++++|| ...|+.+=++|++-..
T Consensus 157 ~y~~i~~~lgv~p~e~lfVgD-s~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 157 SYVKIAGQLGSPPREILFLSD-IINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHhCcChhHEEEEeC-CHHHHHHHHHcCCEEE
Confidence 222333444333467999999 9999999999998643
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.66 Score=40.50 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=29.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVA---CELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~gi~~ 338 (703)
=|++.++|+.|+++|++++++|-....+...++ +++|+..
T Consensus 16 ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 16 IPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp -TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred CcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 589999999999999999999988755544444 5678765
|
... |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=91.71 E-value=0.2 Score=49.94 Aligned_cols=96 Identities=11% Similarity=0.099 Sum_probs=55.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA--VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t--a~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
.|++.+.++.|+++|+++.++|...... ........++... -..++...+. ....|+-
T Consensus 96 ~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~------------------~~~KP~p 155 (211)
T TIGR02247 96 RPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL--FDAVVESCLE------------------GLRKPDP 155 (211)
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh--CCEEEEeeec------------------CCCCCCH
Confidence 7999999999999999999999865432 2222222333221 0111111100 0012221
Q ss_pred H--HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 377 K--LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 377 K--~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
. ..+.+.+.-....+++||| ...|+.+=++|++- |.+.
T Consensus 156 ~~~~~~~~~~g~~~~~~l~i~D-~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 156 RIYQLMLERLGVAPEECVFLDD-LGSNLKPAAALGITTIKVS 196 (211)
T ss_pred HHHHHHHHHcCCCHHHeEEEcC-CHHHHHHHHHcCCEEEEEC
Confidence 1 2222333323456889999 99999999999984 4443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.61 E-value=1.2 Score=42.07 Aligned_cols=100 Identities=10% Similarity=0.106 Sum_probs=67.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH---HHHc-----CCCCCCCCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEV---ACEL-----GNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~i---a~~~-----gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
++++.+..+.+++.|++++-+|++..-.+... -.+. ++.. ....++...+-..... .+..
T Consensus 29 h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~---Gpv~~sP~~l~~al~r---------Evi~ 96 (157)
T PF08235_consen 29 HPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD---GPVLLSPDSLFSALHR---------EVIS 96 (157)
T ss_pred hhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC---CCEEECCcchhhhhhc---------cccc
Confidence 99999999999999999999999996555432 2222 4433 2233332222111111 1455
Q ss_pred EeChhhHHHHHHHHHhC-----CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 371 SCLAADKLLLVQTAKEK-----GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~~-----g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
+-..+.|...++.++.. ....+..|+ ..+|+.+.+++++-
T Consensus 97 ~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN-~~tDv~aY~~vGip 141 (157)
T PF08235_consen 97 KDPEEFKIACLRDLRALFPPDGNPFYAGFGN-RSTDVIAYKAVGIP 141 (157)
T ss_pred cChHHHHHHHHHHHHHhcCCCCCeEEEecCC-cHHHHHHHHHcCCC
Confidence 55668899999999864 346778899 99999999988764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.48 Score=50.70 Aligned_cols=89 Identities=11% Similarity=0.050 Sum_probs=66.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----cCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE----LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~----~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++.++++.|++.|+++.++|.-+...+..+-++ +|+... + ......+
T Consensus 33 ~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~-----------------------f----~~~~~~~ 85 (320)
T TIGR01686 33 HKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED-----------------------F----DARSINW 85 (320)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH-----------------------e----eEEEEec
Confidence 57899999999999999999999999999999888 776541 0 1112223
Q ss_pred hhHHHHHHHHHh----CCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 375 ADKLLLVQTAKE----KGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 375 ~~K~~iv~~lq~----~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
.-|.+.++.+.+ ....++|+|| ...|+.+.+++..++.+-
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD-~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDD-NPAERANVKITLPVKTLL 129 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECC-CHHHHHHHHHHCCCCccC
Confidence 345554444433 2468999999 999999999988886543
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=89.53 E-value=31 Score=42.44 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHhCCCEEEE-EeCCCCCCHHHH
Q 044228 375 ADKLLLVQTAKEKGHVVAF-FGGSSTRDTPAL 405 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~-iGD~G~ND~~al 405 (703)
++=.+.|+.+|+.|-.|.| +|| ...-+.++
T Consensus 553 ~~a~~aI~~l~~aGI~v~miTGD-~~~tA~aI 583 (903)
T PRK15122 553 ESAAPAIAALRENGVAVKVLTGD-NPIVTAKI 583 (903)
T ss_pred HHHHHHHHHHHHCCCeEEEECCC-CHHHHHHH
Confidence 3445678899999866655 599 65444333
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.24 E-value=0.65 Score=45.80 Aligned_cols=96 Identities=18% Similarity=0.177 Sum_probs=56.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE-LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD- 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~- 376 (703)
.|++.++++.|+++|+++.++|.-+.......-.. .++... ...++...+. ....|.-
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~------------------~~~KP~p~ 145 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQDL------------------GMRKPEAR 145 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEeccc------------------CCCCCCHH
Confidence 78999999999999999999998776554332211 233211 1111111111 1112211
Q ss_pred -HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 377 -KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 377 -K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
=..+.+.+.-..+.++++|| ...|+.+-++|++- +.+.
T Consensus 146 ~~~~~~~~~~~~p~~~l~vgD-~~~di~aA~~aG~~~i~~~ 185 (199)
T PRK09456 146 IYQHVLQAEGFSAADAVFFDD-NADNIEAANALGITSILVT 185 (199)
T ss_pred HHHHHHHHcCCChhHeEEeCC-CHHHHHHHHHcCCEEEEec
Confidence 12223333333467899999 99999999999885 3344
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.23 E-value=0.8 Score=44.47 Aligned_cols=89 Identities=13% Similarity=0.064 Sum_probs=59.0
Q ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHH
Q 044228 303 KSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQ 382 (703)
Q Consensus 303 ~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~ 382 (703)
.++++.|++. +++.++||.....+..+-+..|+... ...++.+++.. ..+-.|+-=....+
T Consensus 93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~--fd~i~~~~~~~----------------~~KP~p~~~~~~~~ 153 (188)
T PRK10725 93 IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY--FDAVVAADDVQ----------------HHKPAPDTFLRCAQ 153 (188)
T ss_pred HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH--ceEEEehhhcc----------------CCCCChHHHHHHHH
Confidence 5889999875 89999999999999999999998653 22333333221 01111221222333
Q ss_pred HHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 383 TAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 383 ~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.++-....++++|| ..+|+.+=++|++-
T Consensus 154 ~~~~~~~~~l~igD-s~~di~aA~~aG~~ 181 (188)
T PRK10725 154 LMGVQPTQCVVFED-ADFGIQAARAAGMD 181 (188)
T ss_pred HcCCCHHHeEEEec-cHhhHHHHHHCCCE
Confidence 33323346889999 99999999999884
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=88.40 E-value=4.7 Score=45.73 Aligned_cols=149 Identities=13% Similarity=0.103 Sum_probs=87.4
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE--EeChhhHHHHH
Q 044228 305 TVEALRNAGVRIILVSEDELLAVTEVACE-LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG--SCLAADKLLLV 381 (703)
Q Consensus 305 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~--r~~P~~K~~iv 381 (703)
+.+.++++|.+ +++|+-...-++.+|++ +|++.- -|.+++...+..+ .. .+-. .+.-++|.+-+
T Consensus 115 a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~V-------IgTeLev~~~G~~---TG--~i~g~~~c~Ge~Kv~rl 181 (497)
T PLN02177 115 TWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADKV-------LGTELEVSKSGRA---TG--FMKKPGVLVGDHKRDAV 181 (497)
T ss_pred HHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEE-------EecccEECcCCEE---ee--eecCCCCCccHHHHHHH
Confidence 44556677855 99999999999999987 898731 1222110000000 00 0111 13446788877
Q ss_pred HHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHHh-ccchhhhchhhhhhHHhhh
Q 044228 382 QTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPILK-LGRCAYCNIQKFTKLQLTG 460 (703)
Q Consensus 382 ~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~-~gR~~~~~i~~~~~~~l~~ 460 (703)
+..........+.|| ..||.|||+.||-+.+++... .. . +..-.....+|- .||-.++-.-......+.+
T Consensus 182 ~~~~g~~~~~~aYgD-S~sD~plL~~a~e~y~V~~~~---~~---~--~~~~~~~~~~~fhdgrl~~~p~~~~~l~~~~~ 252 (497)
T PLN02177 182 LKEFGDALPDLGLGD-RETDHDFMSICKEGYMVPRTK---CE---P--LPRNKLLSPVIFHEGRLVQRPTPLVALLTFLW 252 (497)
T ss_pred HHHhCCCCceEEEEC-CccHHHHHHhCCccEEeCCCC---CC---c--CCcccCCCceeeeCCcccCCCCHHHHHHHHHH
Confidence 643322222368899 999999999999999998411 10 0 122122334454 4999888777766666666
Q ss_pred hhHHHHHHHHHHHhc
Q 044228 461 CASGLLITLVTTLIL 475 (703)
Q Consensus 461 n~~~~~~~~~~~~~~ 475 (703)
-=+++.++++-.+.+
T Consensus 253 ~p~g~~l~~~r~~~~ 267 (497)
T PLN02177 253 MPIGFILSLLRVYLN 267 (497)
T ss_pred HHHHHHHHHHHHHHh
Confidence 555555555544433
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=87.20 E-value=1.6 Score=46.39 Aligned_cols=40 Identities=20% Similarity=0.327 Sum_probs=33.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVA---CELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~gi~~ 338 (703)
=++++++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 46 ~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 46 IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 588999999999999999999999977777766 5577753
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.90 E-value=0.54 Score=46.30 Aligned_cols=114 Identities=11% Similarity=0.152 Sum_probs=64.9
Q ss_pred cccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh-hh
Q 044228 299 REEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA-AD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P-~~ 376 (703)
-|+..++|+.+++.|- .++++|--|.--...+-+..|+.+- ...+.+.....+........-...-+-|.+|.| -=
T Consensus 86 ~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 86 VPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--FSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--HHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 7899999999999997 9999999998877777777776531 000000000000000000000000012334333 23
Q ss_pred HHHHHHHHHhCC-------CEEEEEeCCCCCCH-HHHhhCCcceecC
Q 044228 377 KLLLVQTAKEKG-------HVVAFFGGSSTRDT-PALKEADVGITEE 415 (703)
Q Consensus 377 K~~iv~~lq~~g-------~~v~~iGD~G~ND~-~al~~AdvGIa~~ 415 (703)
|..++..++..+ +.+..+|| |.||. |+++...--+||-
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGD-G~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGD-GANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcC-CCCCcCcchhcccCceecc
Confidence 666766665432 37889999 99995 6776665556654
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=85.63 E-value=1.7 Score=42.60 Aligned_cols=92 Identities=14% Similarity=0.061 Sum_probs=54.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--CCceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE--SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
.||+.++++.|++.+ +.+++|.-+..+....-+.+|+...- ....++ .++... .
T Consensus 76 ~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~----------------------~~~~~~-~ 131 (197)
T PHA02597 76 YDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVL----------------------MCGHDE-S 131 (197)
T ss_pred CCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEE----------------------EeccCc-c
Confidence 789999999999875 56666765444444444566654210 001111 122211 1
Q ss_pred HHHHHH-HHHhCC-CEEEEEeCCCCCCHHHHhhC--Ccce-ecC
Q 044228 377 KLLLVQ-TAKEKG-HVVAFFGGSSTRDTPALKEA--DVGI-TEE 415 (703)
Q Consensus 377 K~~iv~-~lq~~g-~~v~~iGD~G~ND~~al~~A--dvGI-a~~ 415 (703)
|.++++ .+++.| +.++++|| ..+|+.+-++| |+-. .+.
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgD-s~~di~aA~~a~~Gi~~i~~~ 174 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDD-LAHNLDAAHEALSQLPVIHML 174 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCC-CHHHHHHHHHHHcCCcEEEec
Confidence 333333 333333 46889999 99999999999 9853 343
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=85.25 E-value=1.8 Score=41.99 Aligned_cols=93 Identities=15% Similarity=0.033 Sum_probs=59.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh--
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD-- 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~-- 376 (703)
.+++.+++++|+ .+++++|.-+...+....+..|+... ...++.+++... -+....|..
T Consensus 86 ~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~--------------~~~~~KP~p~~ 146 (184)
T TIGR01993 86 DPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC--FDGIFCFDTANP--------------DYLLPKPSPQA 146 (184)
T ss_pred CHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh--hCeEEEeecccC--------------ccCCCCCCHHH
Confidence 678899999887 47899999988889999999998642 122222221110 000013321
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
=..+.+.+......++++|| ...|+.+=++|++.
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD-~~~di~aA~~~G~~ 180 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDD-SARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHhCCCccceEEEeC-CHHHHHHHHHcCCE
Confidence 12333444434567899999 99999988888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.06 E-value=4.8 Score=41.33 Aligned_cols=40 Identities=10% Similarity=0.099 Sum_probs=34.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH---cCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE---LGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~---~gi~~ 338 (703)
-|++.++++.|+++|++++++|+....+...++++ +|+.-
T Consensus 19 ~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~ 61 (248)
T PRK10444 19 VPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 61 (248)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 58899999999999999999999999888777776 47743
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=84.93 E-value=5.4 Score=40.94 Aligned_cols=41 Identities=15% Similarity=0.176 Sum_probs=34.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSE---DELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TG---D~~~ta~~ia~~~gi~~~ 339 (703)
=+++.++|++|+++|++++++|| +..+......+++|+...
T Consensus 19 i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 19 IPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 35789999999999999999996 667777777888888654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=84.87 E-value=6.1 Score=42.59 Aligned_cols=62 Identities=18% Similarity=0.250 Sum_probs=43.3
Q ss_pred hHHHHHHHHHhC-C------CEEEEEeCCCCCCHHHHhhC-----CcceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G------HVVAFFGGSSTRDTPALKEA-----DVGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g------~~v~~iGD~G~ND~~al~~A-----dvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
+|...++.+.+. + ..++++|| ...|-.|++.. ++||-+|. +.. ...|++.+.+...+.+++.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGD-D~TDEDaF~~L~~~~~G~gI~Vg~-~~k--~T~A~y~L~dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGD-DRTDEDAFKILRDKKQGLGILVSK-YAK--ETNASYSLQEPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcC-CCcHHHHHHHHhhcCCCccEEecc-CCC--CCcceEeCCCHHHHHHHHH
Confidence 788888877654 1 24899999 99999999853 56676762 221 2257888887666666664
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.69 E-value=1.5 Score=44.61 Aligned_cols=87 Identities=10% Similarity=0.080 Sum_probs=52.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-||+.++++.|++. +++.++|..+.. .+..|+... ...++..++. .+..|.- .
T Consensus 115 ~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~--fd~i~~~~~~------------------~~~KP~p-~ 167 (238)
T PRK10748 115 PQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDY--FEFVLRAGPH------------------GRSKPFS-D 167 (238)
T ss_pred CccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHh--hceeEecccC------------------CcCCCcH-H
Confidence 58999999999875 899999886554 145666532 1112221111 1112321 1
Q ss_pred HHHHHHHh---CCCEEEEEeCCC-CCCHHHHhhCCccee
Q 044228 379 LLVQTAKE---KGHVVAFFGGSS-TRDTPALKEADVGIT 413 (703)
Q Consensus 379 ~iv~~lq~---~g~~v~~iGD~G-~ND~~al~~AdvGIa 413 (703)
-+.+.+++ ....++|||| . ..|+.+=++|++-..
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD-~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGD-DLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcC-CcHHHHHHHHHCCCeEE
Confidence 12222333 3457999999 9 599999999988544
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=83.34 E-value=2.2 Score=43.26 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=53.2
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELL----AVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~----ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
|++.+.++.+++.|++|..+||++.. |..+ -++.|.... ..+++.+..-. -.....+
T Consensus 118 p~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~n-L~~~G~~~~--~~l~lr~~~~~----------------~~~~~~~ 178 (229)
T PF03767_consen 118 PGALELYNYARSRGVKVFFITGRPESQREATEKN-LKKAGFPGW--DHLILRPDKDP----------------SKKSAVE 178 (229)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHH-HHHHTTSTB--SCGEEEEESST----------------SS-----
T ss_pred HHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHH-HHHcCCCcc--chhcccccccc----------------ccccccc
Confidence 67889999999999999999998854 3333 345565431 12222221100 0000123
Q ss_pred hHHHHHHHHHhCCC-EEEEEeCCCCCCHHH
Q 044228 376 DKLLLVQTAKEKGH-VVAFFGGSSTRDTPA 404 (703)
Q Consensus 376 ~K~~iv~~lq~~g~-~v~~iGD~G~ND~~a 404 (703)
.|...-+.++++|+ +++.+|| ..+|..-
T Consensus 179 yK~~~r~~i~~~Gy~Ii~~iGD-~~~D~~~ 207 (229)
T PF03767_consen 179 YKSERRKEIEKKGYRIIANIGD-QLSDFSG 207 (229)
T ss_dssp -SHHHHHHHHHTTEEEEEEEES-SGGGCHC
T ss_pred cchHHHHHHHHcCCcEEEEeCC-CHHHhhc
Confidence 48888888988865 6677999 9998865
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.36 E-value=2.9 Score=42.11 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=71.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+|+.+.++.|++.|+.+.+.|+-....+..+.+..|+... ...++++.+...- .-.|+-=.
T Consensus 88 ~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~--f~~~v~~~dv~~~----------------KP~Pd~yL 149 (221)
T COG0637 88 IPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY--FDVIVTADDVARG----------------KPAPDIYL 149 (221)
T ss_pred CccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh--cchhccHHHHhcC----------------CCCCHHHH
Confidence 79999999999999999999999999999999999999874 3445555544321 12233323
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce-ecC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TEE 415 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI-a~~ 415 (703)
.-.+.|.-....+.++.| ..|.+.|-++|+.-+ ++.
T Consensus 150 ~Aa~~Lgv~P~~CvviED-s~~Gi~Aa~aAGm~vv~v~ 186 (221)
T COG0637 150 LAAERLGVDPEECVVVED-SPAGIQAAKAAGMRVVGVP 186 (221)
T ss_pred HHHHHcCCChHHeEEEec-chhHHHHHHHCCCEEEEec
Confidence 333333334567899999 999999999999853 344
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=82.17 E-value=3 Score=43.55 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=65.3
Q ss_pred c-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccC-H-HHHHH----hhccCceEEE
Q 044228 299 R-EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELN-S-TERMA----KLDSMTLMGS 371 (703)
Q Consensus 299 r-~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~-~-~~~~~----~~~~~~v~~r 371 (703)
| |++.+++++|+++|+++.++|+-....+...-+++|+... ...++.+.+..... . +..+. ....-..+-.
T Consensus 147 rdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y--FdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d 224 (301)
T TIGR01684 147 RDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY--FDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLN 224 (301)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc--cCEEEECCccccCCCCccccccccceEEecCCeEEe
Confidence 6 8999999999999999999999999999999999999863 34566655554332 2 22221 1222223334
Q ss_pred eC-----hhhHHHHHHHHHhCC----CEEEEEeCCCCCCH
Q 044228 372 CL-----AADKLLLVQTAKEKG----HVVAFFGGSSTRDT 402 (703)
Q Consensus 372 ~~-----P~~K~~iv~~lq~~g----~~v~~iGD~G~ND~ 402 (703)
++ |..=.-++..|++.| +.+--+-|+-.||.
T Consensus 225 ~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 225 TTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred CCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 42 333344667777775 34444566555553
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 703 | ||||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-08 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-08 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 9e-08 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-07 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-07 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-06 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-05 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 9e-05 |
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 703 | |||
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-33 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-33 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 6e-32 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-29 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 8e-29 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 7e-04 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 8e-04 |
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 2e-33
Identities = 115/716 (16%), Positives = 228/716 (31%), Gaps = 164/716 (22%)
Query: 60 SILVSALTVVAIAVQH---GMPFVITVSL----FFWKEKLLINHHAKPQNLSAGATMGIA 112
S L + + ++ I V + G+ +TV L K + + +NL A T+G
Sbjct: 321 SWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA-----KRMARKNCLVKNLEAVETLGST 375
Query: 113 SVICIDVTGGLLCNRVDVSKFCIGEKDVN-------NDVASEINQAVLQALERGIGA--- 162
S IC D TG L NR+ V+ + + A + A AL R I A
Sbjct: 376 STICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSR-IAALCN 434
Query: 163 -SVLVPEISVWPTTDW----------LVSWAKSRSLNVDQNLSIVQYRKL-----SSHNK 206
+V P L+ + +V + K+ +S NK
Sbjct: 435 RAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRD--RNPKIVEIPFNSTNK 492
Query: 207 VCGVLMKI-NGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGE-KRRFQKLIKD 264
+ + + ++ + G IL+ CS G +K + K FQ +
Sbjct: 493 YQLSIHENEKSSESRYLLVMK--GAPERILDRCSTILL-NGAEEPLKEDMKEAFQNAYLE 549
Query: 265 MEDSGLRPIAFAC-------------GQTEVSEIKENGLHLLALAGL----REEIKSTVE 307
+ G R + F + L + L + R + V
Sbjct: 550 LGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVG 609
Query: 308 ALRNAGVRIILV----------------------SEDELLAVTEVACELGNFRPESNDIA 345
R+AG+++I+V E +A ++
Sbjct: 610 KCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACV 669
Query: 346 LEGEQFRELNSTERMAKLDSMTLMGSCLA----ADKLLLVQTAKEKGHVVAFFGGSST-- 399
+ G ++L++ L T A KL++V+ + +G +VA T
Sbjct: 670 VHGSDLKDLSTEVLDDILHYHT--EIVFARTSPQQKLIIVEGCQRQGAIVA-----VTGD 722
Query: 400 --RDTPALKEADVGITEENKCTEMARECSDIV---------ISTVGSLLPILKLGRCAYC 448
D+PALK+AD+G+ ++++++ +D++ ++ V + GR +
Sbjct: 723 GVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGV-------EEGRLIFD 775
Query: 449 NIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQE 508
N++K LT + LV + P+ ++ ++ + ++ + + E + +
Sbjct: 776 NLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESD 835
Query: 509 PVTNPPAR-RTKSLLDKVMWKHAAVQVLCQVVVLLIFQF--------------------- 546
+ P +T L+++ + A Q+ + F +
Sbjct: 836 IMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRW 895
Query: 547 -----------AGQVIPGMNRDIRKA----MTFNSFTLCQVFNQFDAMCLLKKAVQPVVL 591
GQ R I + F S + Q + K + +
Sbjct: 896 DDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIIC-----KTRRNSIF 950
Query: 592 ------KKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGI 641
K + F + +A + L W F +++ +
Sbjct: 951 QQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLY 1006
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 3e-33
Identities = 94/620 (15%), Positives = 205/620 (33%), Gaps = 62/620 (10%)
Query: 65 ALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLL 124
A+T++ + V G+P V+T ++ L A Q LSA ++ ++C D TG L
Sbjct: 328 AITIIGVPV--GLPAVVTTTMAVGAAYL-AKKKAIVQKLSAIESLAGVEILCSDKTGTLT 384
Query: 125 CNRVDVSKFCIGEKDVNNDVASEINQAVLQA-LERGIGASVLVPEISVWPTTDWLVSWAK 183
N++ + D+ + A L A ++ + K
Sbjct: 385 KNKLSLHDPYTVAGVDPEDL---MLTACLAASRKKKGI----------DAIDKAFLKSLK 431
Query: 184 SRSLNVDQNLSIVQYRKLS-----SHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMC 238
+ +Y+ L +K +++ G+ + G +L
Sbjct: 432 YYPRAKS---VLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCV----KGAPLFVLKTV 484
Query: 239 SYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL 298
+ + + ++ + + G R + A + E +L +
Sbjct: 485 EEDHPIPEE------VDQAYKNKVAEFATRGFRSLGVARKRGE------GSWEILGIMPC 532
Query: 299 ----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFREL 354
R + TV + G+ I +++ D + E + +LG N L ++
Sbjct: 533 MDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDM 592
Query: 355 NSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFG-GSSTRDTPALKEADVGIT 413
+E +++ K +V+ +++G++VA G G D P+LK+AD GI
Sbjct: 593 PGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDG--VNDAPSLKKADTGIA 650
Query: 414 EENKCTEMARECSDIVISTVGSLLPI---LKLGRCAYCNIQKFTKLQLTGCASGLLITLV 470
E ++ AR +DIV L I LK R + + + ++ L I L
Sbjct: 651 VEG-SSDAARSAADIVF-LAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS-IHLEIFLG 707
Query: 471 TTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHA 530
+ + + ++++ I + L + + + P L +
Sbjct: 708 LWIAILNRSLNIELVVFI-AIFADVATLAIAYD--NAPYSQTPVKWNLPKLWGMSVLLGV 764
Query: 531 AVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVV 590
+ V + V ++ N + F +L + + F +A P
Sbjct: 765 VLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFIT-----RANGPFW 819
Query: 591 LKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAG 650
++ + I + + + + + +I + + I V +I
Sbjct: 820 SSIPSWQLSGAIFLVDILATCFTIWGWFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQ 879
Query: 651 SFLDWSLSGILRLEFSRRQQ 670
+ + + ++Q
Sbjct: 880 DSVGFDNLMHGKSPKGNQKQ 899
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 6e-32
Identities = 117/712 (16%), Positives = 236/712 (33%), Gaps = 155/712 (21%)
Query: 60 SILVSALTVVAIAVQH---GMPFVITVSL----FFWKEKLLINHHAKPQNLSAGATMGIA 112
+ L + + +AI V + G+ +TV L K L + + +NL A T+G
Sbjct: 326 TFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA-----KRLASKNCVVKNLEAVETLGST 380
Query: 113 SVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVAS-------EINQAVLQALERGIGA--- 162
SVIC D TG L NR+ VS + D + + +AL R +
Sbjct: 381 SVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCR-VLTLCN 439
Query: 163 -SVLVPEISVWPTTDW----------LVSWAKSRSLNVDQNLSIVQYRKL-----SSHNK 206
+ P L+ +++ N ++ K+ +S NK
Sbjct: 440 RAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRE--RFPKVCEIPFNSTNK 497
Query: 207 VCGVLMKI-NGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKD 264
+ + + D ++ + G +L CS +G+ + + + FQ
Sbjct: 498 FQLSIHTLEDPRDPRHVLVMK--GAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLS 554
Query: 265 MEDSGLRPIAFAC-------------GQTEVSEIKENGLHLLALAGL----REEIKSTVE 307
+ G R + F E +GL L + R + V
Sbjct: 555 LGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVL 614
Query: 308 ALRNAGVRII------------------LVSED----ELLAVTEVACELGNFRPESNDIA 345
R AG+R+I ++SE E +A R ++
Sbjct: 615 KCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACV 674
Query: 346 LEGEQFRELNSTERMAKLDSMTLMGSCLA----ADKLLLVQTAKEKGHVVAFFGGSST-- 399
+ G Q ++++ +E + L + A KL++V++ + G +VA T
Sbjct: 675 INGMQLKDMDPSELVEALRTHP--EMVFARTSPQQKLVIVESCQRLGAIVA-----VTGD 727
Query: 400 --RDTPALKEADVGITEENKCTEMARECSDIV---------ISTVGSLLPILKLGRCAYC 448
D+PALK+AD+G+ ++ A+ +D++ ++ V + GR +
Sbjct: 728 GVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGV-------EQGRLIFD 780
Query: 449 NIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQE 508
N++K LT L L+ + P+ I ++++ I + + E + +
Sbjct: 781 NLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESD 840
Query: 509 PVTNPP-ARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQF--------------------- 546
+ P + L+++ + ++ Q+ +
Sbjct: 841 IMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQW 900
Query: 547 -----------AGQVIPGMNRDIRKA----MTFNSFTLCQVFNQFDAMCLLKKAVQPVVL 591
GQ R ++ + F S +CQ+ + A Q
Sbjct: 901 ENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFF 960
Query: 592 --KKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGI 641
+ + +VF + I + ++ + + W + +L +
Sbjct: 961 RNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVY 1012
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 3e-29
Identities = 117/727 (16%), Positives = 237/727 (32%), Gaps = 152/727 (20%)
Query: 45 VKLFERFLLKPQGKISILVSALTVVAIAVQH---GMPFVITVSLFFWKEKLLINHHAKPQ 101
+ F + + VA+AV G+P VIT L ++ +A +
Sbjct: 277 IGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM-AKKNAIVR 335
Query: 102 NLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI------------------------GE 137
+L + T+G SVIC D TG L N++ V K I GE
Sbjct: 336 SLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGE 395
Query: 138 KDVNNDVASEINQAVLQALERGIGA----SVLVP--EISVW-----PT------------ 174
N+ L L I A S L V+ T
Sbjct: 396 VLKNDKPIRSGQFDGLVELAT-ICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMN 454
Query: 175 --TDWLVSWAKSRSLNVDQNLSIVQYRKL-----SSHNKVCGVLMKINGGDEDKIMHINW 227
+ + +K N ++ +K S K V + + +
Sbjct: 455 VFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMF 514
Query: 228 S-GTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKD--MEDSGLRPIAFAC------- 277
G +++ C+Y + K + +IK+ LR +A A
Sbjct: 515 VKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKR 574
Query: 278 -----GQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVT 328
+ E L + + G+ R+E+ +++ R+AG+R+I+++ D
Sbjct: 575 EEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAI 634
Query: 329 EVACELGNFRPESN--DIALEGEQFRELNSTERMAKLDSMTLMGSCLA----ADKLLLVQ 382
+ +G F D A G +F +L E+ C A + K +V+
Sbjct: 635 AICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRR----ACCFARVEPSHKSKIVE 690
Query: 383 TAKEKGHVVAFFGGSST----RDTPALKEADVGI---TEENKCTEMARECSDIV------ 429
+ + A T D PALK+A++GI + T +A+ S++V
Sbjct: 691 YLQSYDEITA-----MTGDGVNDAPALKKAEIGIAMGSG----TAVAKTASEMVLADDNF 741
Query: 430 ---ISTVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLI 486
++ V + GR Y N+++F + ++ ++ +T + + +QL+
Sbjct: 742 STIVAAV-------EEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLL 794
Query: 487 WVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQ-VLCQVVVLLIFQ 545
WV + L + D + + PP + L+ ++ +
Sbjct: 795 WVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAA 854
Query: 546 FA---------------------------GQVIPGMNRDIRKAMT--FNSFTLCQVFNQF 576
+ + + + + MT + ++ N
Sbjct: 855 WWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNAL 914
Query: 577 DAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLV--VEFATSLAGYQRLNGMHWGICFIL 634
+++ + ++ I L + +++ L+ V+ + + L+ W + +
Sbjct: 915 NSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKI 974
Query: 635 AVLPWGI 641
++ G+
Sbjct: 975 SLPVIGL 981
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 8e-29
Identities = 77/447 (17%), Positives = 160/447 (35%), Gaps = 62/447 (13%)
Query: 237 MCSYYYDSEGKSFEI-KG--------------EKRRFQKLIKDMEDSGLRPIAFACGQ-- 279
Y D G + KG ++ +I + GLR +A A
Sbjct: 407 TALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVP 466
Query: 280 TEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG 335
+ E + L L R + T+ N GV + +++ D+L E LG
Sbjct: 467 EKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 526
Query: 336 NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD---------KLLLVQTAKE 386
+ L T + A L S+ + AD K +V+ +E
Sbjct: 527 --------MGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQE 578
Query: 387 KGHVVAFFG-GSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPI---LKL 442
+ H+V G G D PALK+AD+GI + T+ AR SDIV+ T L I +
Sbjct: 579 RKHIVGMTGDG--VNDAPALKKADIGIAVAD-ATDAARGASDIVL-TEPGLSVIISAVLT 634
Query: 443 GRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRM 502
R + ++ +T ++ + ++ LI E ++ ++ + I+ G +M +
Sbjct: 635 SRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEF-DFSAFMVLII-AILN--DGTIMTI 690
Query: 503 EFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLI-----FQFAGQVIPGMNRD 557
+P P + + K + + Q + V+ F + + +
Sbjct: 691 SKDRVKPSPTPDSWKLKEIFATGVVL-GGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDN 749
Query: 558 IRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSL 617
+ M + + A+ + ++ +++ L++ +IA + + +
Sbjct: 750 NHELMGAVYLQVSIISQ---ALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYAN 806
Query: 618 AGY---QRLNGMHWGICFILAVLPWGI 641
+ + + G+ ++ +++ +
Sbjct: 807 WEFAKIRGIGWGWAGVIWLYSIVTYFP 833
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 2e-05
Identities = 59/402 (14%), Positives = 108/402 (26%), Gaps = 145/402 (36%)
Query: 147 EINQAVLQALER----------GIGASVLVPEI----SVWPTTDWLVSWAKSRSLNVDQN 192
++ QA L L G G + + ++ V D+ + W ++ N +
Sbjct: 139 KLRQA-LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197
Query: 193 LSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIK 252
+ L K+ + NW+ + + + I+
Sbjct: 198 V-------LEMLQKLLYQIDP------------NWTSRSD---HSSNIKLRIH----SIQ 231
Query: 253 GEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNA 312
E RR K K E+ LL L ++ A N
Sbjct: 232 AELRRLLKS-KPYENC-----------------------LLVLLNVQN--AKAWNAF-NL 264
Query: 313 GVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372
+I+L + + VT+ + L E +L+
Sbjct: 265 SCKILLTTRFK--QVTDFLSAATTTHISLDHH-SMT-----LTPDE------VKSLLLKY 310
Query: 373 LAADKLLLVQTAKEKGH--VVAFFGGSSTRDTPALKEADVGITEEN----KCTEMARECS 426
L L + + ++ S RD A T +N C ++
Sbjct: 311 LDCRPQDLPREVL-TTNPRRLSII-AESIRDGLA--------TWDNWKHVNCDKLTT--- 357
Query: 427 DIVISTVGSLLP-ILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEES---PITS 482
I+ S++ L P + + F +L + S P
Sbjct: 358 -IIESSLNVLEPAEYR---------KMFDRLS----------------VFPPSAHIPTIL 391
Query: 483 IQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDK 524
+ LIW + D V N + SL++K
Sbjct: 392 LSLIWFD------------VIKSDVMVVVNKLHK--YSLVEK 419
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 8e-05
Identities = 57/461 (12%), Positives = 110/461 (23%), Gaps = 173/461 (37%)
Query: 249 FEIKGEKRRFQKLI-------------KDMEDSGLRPIAFACGQTEVSEI-----KENGL 290
FE + +++ ++ KD++D + I + E+ I +G
Sbjct: 9 FETGEHQYQYKDILSVFEDAFVDNFDCKDVQDM-PKSI---LSKEEIDHIIMSKDAVSGT 64
Query: 291 HLL--------------------------ALAGLREEIK----------STVEALRNAGV 314
L ++ ++ E + + L N
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 315 RII---LVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG- 370
+ L + + EL RP N + ++G + G
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLEL---RPAKN-VLIDG-----------------VLGSGK 163
Query: 371 SCLAADKLLLVQTAKEKGHVVAFFG-------GSSTRDTPALK---------------EA 408
+ +A D + L+ +
Sbjct: 164 TWVALD------VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217
Query: 409 DVGITEENKCTEMARECSDIVISTVG--SLLPIL------KLGRCAYCNIQKFTKLQLTG 460
D + + + E ++ S LL +L K F
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLL-VLLNVQNAKA-------WNAFN----LS 265
Query: 461 CASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKS 520
C L+TT +T + + P KS
Sbjct: 266 CK-----ILLTT---RFKQVTDF----------LSAATTTHISLDHHSMTLTPDE--VKS 305
Query: 521 LLDKVMWKHAAVQVL----CQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSF--TLCQVFN 574
LL K + Q L + A + G+ ++++ C
Sbjct: 306 LLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT-------WDNWKHVNCDKLT 356
Query: 575 QFDAMCLLKKAVQPVVLKKINF--LVVFV--IVIAVQVLVV 611
L ++P +K F L VF I +L +
Sbjct: 357 TIIESSL--NVLEPAEYRK-MFDRLSVFPPSAHIPTILLSL 394
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 7e-04
Identities = 31/167 (18%), Positives = 64/167 (38%), Gaps = 44/167 (26%)
Query: 292 LLALA-GLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQ 350
++ R +K +E L+N G++II++S D+ V E++ EL
Sbjct: 130 SFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN--------------- 174
Query: 351 FRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFG-GSSTRDTPALKEAD 409
+ + DK+ +++ K+ G+ V G G D AL AD
Sbjct: 175 ------------IQ--EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDG--VNDAAALALAD 218
Query: 410 VGI---TEENKCTEMARECSDIVISTVGSLLPI---LKLGRCAYCNI 450
V + ++++ +DI++ + + + +K + I
Sbjct: 219 VSVAMGNG----VDISKNVADIILVS-NDIGTLLGLIKNRKRLSNAI 260
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 39.5 bits (91), Expect = 8e-04
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 24/54 (44%)
Query: 254 EKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVE 307
EK+ +KL + L+ +A ALA IK+T+E
Sbjct: 18 EKQALKKL-----QASLKL--YADDSAP------------ALA-----IKATME 47
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 703 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.96 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.96 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.94 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.82 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.6 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.45 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.26 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.17 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.09 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.08 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.07 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.03 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.91 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.91 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.91 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.81 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.8 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.78 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.73 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.73 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.71 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.68 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.68 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.68 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.67 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.64 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.64 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.61 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.6 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 98.59 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.57 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.57 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.57 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.56 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.56 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.54 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.49 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.47 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.46 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.43 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.41 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.4 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.35 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.28 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.28 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.28 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.26 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.26 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.25 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.23 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.22 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.21 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.21 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.21 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.2 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.2 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.19 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.18 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.18 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.18 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.17 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.16 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.16 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.14 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.13 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 98.12 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.11 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.11 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.09 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.08 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.08 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.08 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.05 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.05 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.03 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.01 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.01 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.0 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.99 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.97 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.93 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.93 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.89 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.89 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.88 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.88 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.88 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.83 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.82 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.82 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.78 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.78 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.75 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.73 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.72 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.7 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.68 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.68 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.65 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.56 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.56 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.5 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.44 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.37 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.36 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.35 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.31 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.29 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.28 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.25 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.24 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.19 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.18 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.91 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.73 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.67 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.65 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.65 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.55 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.54 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.43 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.41 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.37 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.33 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.31 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.28 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.05 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.97 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.83 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.56 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.94 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.65 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.51 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 94.49 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.47 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.1 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 92.6 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 92.24 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 92.13 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 90.15 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 88.99 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 86.93 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 86.64 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 84.15 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 84.07 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 83.66 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 83.37 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 81.61 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-90 Score=836.88 Aligned_cols=591 Identities=17% Similarity=0.238 Sum_probs=508.2
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
.++..++.+++++++++||||||++++++++.+++|| +|+|++||+++++|+||++++||||||||||+|+|+|.+++.
T Consensus 325 ~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm-ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~ 403 (1034)
T 3ixz_A 325 YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL-ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWF 403 (1034)
T ss_pred chHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH-hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEE
Confidence 3778899999999999999999999999999999999 999999999999999999999999999999999999999998
Q ss_pred CCeecCCCCc--------ccccHHHHHHHHH-Hhccccc-----------CCcccCChHHHHHHHHHHhCCC---ccccc
Q 044228 136 GEKDVNNDVA--------SEINQAVLQALER-GIGASVL-----------VPEISVWPTTDWLVSWAKSRSL---NVDQN 192 (703)
Q Consensus 136 ~~~~~~~~~~--------~~~~~~~~~~l~~-~~~~~~~-----------~~~~~~~p~e~Al~~~~~~~~~---~~~~~ 192 (703)
++..+..+.. ...++...+++.. +.|++.. .....|||+|.|+++++++.+. ..+++
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~ 483 (1034)
T 3ixz_A 404 DNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRER 483 (1034)
T ss_pred CCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHh
Confidence 7765432211 1112222233322 2343321 1234789999999999987654 44577
Q ss_pred cceEEEecCCCCCCeEEEEEEeCC--CCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcC
Q 044228 193 LSIVQYRKLSSHNKVCGVLMKING--GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSG 269 (703)
Q Consensus 193 ~~~l~~~~F~s~~k~msviv~~~~--~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G 269 (703)
+++++++||+|+||+|+++++..+ +++ +++|+|||||.|+++|+.+.. +|...|+ ++.++.+.+..++++++|
T Consensus 484 ~~~~~~~pF~s~rk~m~~v~~~~~~~~~~---~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G 559 (1034)
T 3ixz_A 484 FPKVCEIPFNSTNKFQLSIHTLEDPRDPR---HVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLG 559 (1034)
T ss_pred CcceEEeeecCCCceEEEEEEecCCCCcc---EEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHHHHHHHHHHHhcC
Confidence 899999999999999998887643 122 889999999999999998775 6778888 888999999999999999
Q ss_pred CceEEEEEeecCc-------------ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 044228 270 LRPIAFACGQTEV-------------SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVAC 332 (703)
Q Consensus 270 ~r~l~~A~~~l~~-------------~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~ 332 (703)
+||+++|++.++. .+..|+||+|+|++++ |++++++|++|+++||+++|+|||+..||.++|+
T Consensus 560 ~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~ 639 (1034)
T 3ixz_A 560 ERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAA 639 (1034)
T ss_pred cHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence 9999999998752 1235899999999999 9999999999999999999999999999999999
Q ss_pred HcCCCCCC----------------------CCceeeechhhhccCHHHHHHhhccCc--eEEEeChhhHHHHHHHHHhCC
Q 044228 333 ELGNFRPE----------------------SNDIALEGEQFRELNSTERMAKLDSMT--LMGSCLAADKLLLVQTAKEKG 388 (703)
Q Consensus 333 ~~gi~~~~----------------------~~~~vi~g~~l~~~~~~~~~~~~~~~~--v~~r~~P~~K~~iv~~lq~~g 388 (703)
++|+..++ ....+++|.++..+.++++.+...++. +|+|++|+||.++|+.+|+.|
T Consensus 640 ~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g 719 (1034)
T 3ixz_A 640 SVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLG 719 (1034)
T ss_pred HcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcC
Confidence 99997542 124689999999999999998887765 999999999999999999999
Q ss_pred CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHH
Q 044228 389 HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLL 466 (703)
Q Consensus 389 ~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~ 466 (703)
++|+|+|| |.||+|||++||+|||||.+|++.+|++||+++. ++.++.+++++||++|+|+++++.|.+++|+..++
T Consensus 720 ~~V~a~GD-G~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~ 798 (1034)
T 3ixz_A 720 AIVAVTGD-GVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELT 798 (1034)
T ss_pred CEEEEECC-cHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999998899999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC-CCCccCHHHHHHHHH-HHHHHHHHHHHH
Q 044228 467 ITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARR-TKSLLDKVMWKHAAV-QVLCQVVVLLIF 544 (703)
Q Consensus 467 ~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~-~~~l~~~~~~~~~~~-~~~~~~~~~~~~ 544 (703)
..+++.++..+.|++++|++|+|+++|.+|++++++|+|++++|++||+++ ++++++++++...++ .++++++..++.
T Consensus 799 ~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 878 (1034)
T 3ixz_A 799 PYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTD 878 (1034)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888899999999999999999999999999999999999999987 688999998776554 477777766665
Q ss_pred HHhhcccCC--------cc---------------------------cccccchhhHHHHHHHHHHhhheeecccccccc-
Q 044228 545 QFAGQVIPG--------MN---------------------------RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQP- 588 (703)
Q Consensus 545 ~~~~~~~~~--------~~---------------------------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~- 588 (703)
+++.....+ .. ....+|+.|++++++|+++.+++|+.+ .++|+
T Consensus 879 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~-~s~~~~ 957 (1034)
T 3ixz_A 879 YFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRR-LSAFQQ 957 (1034)
T ss_pred HHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCC-Cccccc
Confidence 543221100 00 012579999999999999999999854 44555
Q ss_pred cccchHHHHHHHHHHHHHHHHHH--HHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 044228 589 VVLKKINFLVVFVIVIAVQVLVV--EFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFL 653 (703)
Q Consensus 589 ~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~ 653 (703)
+.++|++++++++++++++++++ |+++.+|++.++++.+|+++++++++.++++++.|++.|++.
T Consensus 958 ~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1024 (1034)
T 3ixz_A 958 GFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCP 1024 (1034)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77899999999999999887764 567899999999999999999999999999999999988763
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-90 Score=833.74 Aligned_cols=588 Identities=16% Similarity=0.210 Sum_probs=505.0
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
+|..++.+++++++++||||||++++++++.++++| +|+|++||+++++|+||++|+||||||||||+|+|+|.+++..
T Consensus 321 ~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m-ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 399 (1028)
T 2zxe_A 321 SWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM-ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 399 (1028)
T ss_dssp CHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH-HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEET
T ss_pred cHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH-hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEEC
Confidence 567788999999999999999999999999999999 9999999999999999999999999999999999999999988
Q ss_pred CeecCCCCc--------ccccHHHHHHHH-HHhccccc-----------CCcccCChHHHHHHHHHHhCCC---cccccc
Q 044228 137 EKDVNNDVA--------SEINQAVLQALE-RGIGASVL-----------VPEISVWPTTDWLVSWAKSRSL---NVDQNL 193 (703)
Q Consensus 137 ~~~~~~~~~--------~~~~~~~~~~l~-~~~~~~~~-----------~~~~~~~p~e~Al~~~~~~~~~---~~~~~~ 193 (703)
+..+..+.. ...++...+++. .++|++.. ..+..|||+|.|+++++++.+. ..+..+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~ 479 (1028)
T 2zxe_A 400 NQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRN 479 (1028)
T ss_dssp TEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHS
T ss_pred CeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhC
Confidence 765432210 011232223332 34454332 1124689999999999987532 234578
Q ss_pred ceEEEecCCCCCCeEEEEEEeC---CCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcC
Q 044228 194 SIVQYRKLSSHNKVCGVLMKIN---GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSG 269 (703)
Q Consensus 194 ~~l~~~~F~s~~k~msviv~~~---~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G 269 (703)
++++++||+|+||||+++++.+ +++ +++|+|||||.|+++|++... +|+..++ ++.++++.+.+++++++|
T Consensus 480 ~~~~~~pF~s~rk~msvi~~~~~~~~~~----~~~~~KGA~e~il~~c~~~~~-~g~~~~l~~~~~~~~~~~~~~~a~~G 554 (1028)
T 2zxe_A 480 PKIVEIPFNSTNKYQLSIHENEKSSESR----YLLVMKGAPERILDRCSTILL-NGAEEPLKEDMKEAFQNAYLELGGLG 554 (1028)
T ss_dssp CEEEEECCCTTTCEEEEEEECSCTTTCC----EEEEEEECHHHHHTTEEEECB-TTBCCBCCHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEeccCcccceEEEEEeccCCCCCc----EEEEEeCCcHHHHHHhhhhhc-CCCcccCCHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999874 343 889999999999999998654 6777888 888899999999999999
Q ss_pred CceEEEEEeecCcc-------------cccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 044228 270 LRPIAFACGQTEVS-------------EIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVAC 332 (703)
Q Consensus 270 ~r~l~~A~~~l~~~-------------~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~ 332 (703)
+||+++|+|+++.. +..|+|++|+|++++ |++++++|++|+++||+++|+|||+..||.++|+
T Consensus 555 ~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~ 634 (1028)
T 2zxe_A 555 ERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAK 634 (1028)
T ss_dssp CEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred CEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHH
Confidence 99999999987521 234789999999999 9999999999999999999999999999999999
Q ss_pred HcCCCCCCC----------------------CceeeechhhhccCHHHHHHhhccCc--eEEEeChhhHHHHHHHHHhCC
Q 044228 333 ELGNFRPES----------------------NDIALEGEQFRELNSTERMAKLDSMT--LMGSCLAADKLLLVQTAKEKG 388 (703)
Q Consensus 333 ~~gi~~~~~----------------------~~~vi~g~~l~~~~~~~~~~~~~~~~--v~~r~~P~~K~~iv~~lq~~g 388 (703)
+|||...+. ...+++|++++.+.++++.+...++. +|||++|+||.++|+.+|+.|
T Consensus 635 ~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g 714 (1028)
T 2zxe_A 635 GVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG 714 (1028)
T ss_dssp HHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTT
T ss_pred HcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCC
Confidence 999985321 14689999999999999999888886 999999999999999999999
Q ss_pred CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHH
Q 044228 389 HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLL 466 (703)
Q Consensus 389 ~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~ 466 (703)
++|+|+|| |.||+|||++||||||||.+|+++++++||+++. +++++.+++++||++|+|+++++.|.+++|+..+.
T Consensus 715 ~~V~~iGD-G~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~ 793 (1028)
T 2zxe_A 715 AIVAVTGD-GVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEIT 793 (1028)
T ss_dssp CCEEEEEC-SGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CEEEEEcC-CcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999996799999999999998 79999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCC-CccCHHHHHH-HHHHHHHHHHHHHHH
Q 044228 467 ITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTK-SLLDKVMWKH-AAVQVLCQVVVLLIF 544 (703)
Q Consensus 467 ~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~ 544 (703)
..+++.++..+.|++++|++|+|++++.+|++++++++|++++|++||+.++. ++++++++.. ++..|++++++.++.
T Consensus 794 ~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~ 873 (1028)
T 2zxe_A 794 PFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFS 873 (1028)
T ss_dssp HHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999999999999999999999998766 9999998776 556688888877766
Q ss_pred HHhhcccCCc-----------------c------------------cccccchhhHHHHHHHHHHhhheeeccccccccc
Q 044228 545 QFAGQVIPGM-----------------N------------------RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPV 589 (703)
Q Consensus 545 ~~~~~~~~~~-----------------~------------------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~ 589 (703)
+++.+...+. + ....+|++|++++++|+++.+++|+. ..++|+.
T Consensus 874 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~-~~~~~~~ 952 (1028)
T 2zxe_A 874 YFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR-RNSIFQQ 952 (1028)
T ss_dssp HHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-SSCHHHH
T ss_pred HHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccC-Ccchhcc
Confidence 5432211000 0 01467999999999999999999984 3455664
Q ss_pred ccchHHHHHHHHHHHHHHHHHHH--HHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 590 VLKKINFLVVFVIVIAVQVLVVE--FATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 590 ~~~n~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
.++|+++++++++++++++++++ +++.+|++.++++.+|++++++++..++++++.|++.|++
T Consensus 953 ~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 953 GMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 48999999999998988887765 5688999999999999999999999999999999987765
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-89 Score=824.85 Aligned_cols=588 Identities=18% Similarity=0.268 Sum_probs=503.2
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
.+..++..++++++++||||||+++|++++.++++| +|+|++||+++++|+||++|+||||||||||+|+|+|.+++..
T Consensus 292 ~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m-a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 370 (995)
T 3ar4_A 292 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM-AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFII 370 (995)
T ss_dssp HHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH-HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh-ccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEec
Confidence 345678899999999999999999999999999999 9999999999999999999999999999999999999999875
Q ss_pred CeecC----------------CCCc---------ccccHHHHHHHH-HHhccccc--C--C----cccCChHHHHHHHHH
Q 044228 137 EKDVN----------------NDVA---------SEINQAVLQALE-RGIGASVL--V--P----EISVWPTTDWLVSWA 182 (703)
Q Consensus 137 ~~~~~----------------~~~~---------~~~~~~~~~~l~-~~~~~~~~--~--~----~~~~~p~e~Al~~~~ 182 (703)
+..++ .... ...++.+.+++. .++|++.. . . +..+||+|.|+++++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a 450 (995)
T 3ar4_A 371 DKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLV 450 (995)
T ss_dssp EEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHH
T ss_pred CcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHH
Confidence 32111 0000 011233434333 23454322 0 0 235899999999999
Q ss_pred HhCCC-c------------------cccccceEEEecCCCCCCeEEEEEEeCCC-----CcceeEEEEEeCChHHHHhhc
Q 044228 183 KSRSL-N------------------VDQNLSIVQYRKLSSHNKVCGVLMKINGG-----DEDKIMHINWSGTASTILNMC 238 (703)
Q Consensus 183 ~~~~~-~------------------~~~~~~~l~~~~F~s~~k~msviv~~~~~-----~~~~~~~l~~KGa~e~i~~~c 238 (703)
++.|. . .++.+++++++||+|+||||||+++.++| + +++|+|||||.|+++|
T Consensus 451 ~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~----~~~~~KGa~e~il~~c 526 (995)
T 3ar4_A 451 EKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVG----NKMFVKGAPEGVIDRC 526 (995)
T ss_dssp HHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCC----CEEEEEECHHHHHHTE
T ss_pred HHcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccc----eEEEEcCCHHHHHHhc
Confidence 87664 1 12457899999999999999999997665 3 7799999999999999
Q ss_pred ccccccCCceecc-hHHHHHHHHHHHHH--HhcCCceEEEEEeecCc------------ccccccCcEEEEEEee----c
Q 044228 239 SYYYDSEGKSFEI-KGEKRRFQKLIKDM--EDSGLRPIAFACGQTEV------------SEIKENGLHLLALAGL----R 299 (703)
Q Consensus 239 ~~~~~~~g~~~~l-~~~~~~~~~~~~~~--~~~G~r~l~~A~~~l~~------------~~~~e~~l~~lG~~~~----r 299 (703)
+++.. ++...|+ ++.++++.+.++++ +++|+||+++|||+++. ++.+|+|++|+|++++ |
T Consensus 527 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr 605 (995)
T 3ar4_A 527 NYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605 (995)
T ss_dssp EEEEE-TTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBC
T ss_pred chhhc-CCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCc
Confidence 98766 3456677 78888999999999 99999999999998752 2345889999999999 9
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
++++++|+.|+++||+++|+|||+..||.++|+++|+...+. ...+++|++++.+.++++.+.+.+..+|||++|+||
T Consensus 606 ~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K 685 (995)
T 3ar4_A 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHK 685 (995)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHH
T ss_pred hhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHH
Confidence 999999999999999999999999999999999999986422 257899999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhh
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTK 455 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~ 455 (703)
.++|+.+|++|++|+|+|| |.||+|||++||+||||| +|+++|+++||+++. +++++.+++++||++|+|+++++.
T Consensus 686 ~~~v~~l~~~g~~v~~~GD-G~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~ 763 (995)
T 3ar4_A 686 SKIVEYLQSYDEITAMTGD-GVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIR 763 (995)
T ss_dssp HHHHHHHHTTTCCEEEEEC-SGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcC-CchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999 899999999999998 899999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHH
Q 044228 456 LQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVL 535 (703)
Q Consensus 456 ~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~ 535 (703)
|++++|+..++..+++.++..+.|++++|++|+|+++|.+|++++++++|++++|++||+.++++++++++++.++.+++
T Consensus 764 ~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~ 843 (995)
T 3ar4_A 764 YLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGG 843 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHH
Confidence 99999999988888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-hcccC--------Cc---------------------ccccccchhhHHHHHHHHHHhhheeeccccc
Q 044228 536 CQVVVLLIFQFA-GQVIP--------GM---------------------NRDIRKAMTFNSFTLCQVFNQFDAMCLLKKA 585 (703)
Q Consensus 536 ~~~~~~~~~~~~-~~~~~--------~~---------------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~ 585 (703)
+++++.+..+++ ..... .. .....+|+.|++++++|+++.+++|+.+...
T Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~ 923 (995)
T 3ar4_A 844 YVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSL 923 (995)
T ss_dssp HHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCT
T ss_pred HHHHHHHHHHHHHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccch
Confidence 998776543322 11000 00 0123579999999999999999999865444
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHH--HHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 586 VQPVVLKKINFLVVFVIVIAVQVLVV--EFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 586 ~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
+..+.++|++++++++++++++++++ ++++.+|++.++++.+|+++++++++.+++++++|++.|++
T Consensus 924 ~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 924 MRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp TTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred hccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 55577889999998888887776654 46788999999999999999999999999999999987755
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-83 Score=755.99 Aligned_cols=550 Identities=16% Similarity=0.198 Sum_probs=448.5
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
.++..++.+++++++++||||||+++|++++.|+++| +|+|++||+++++|+||++|+||||||||||+|+|+|.+++.
T Consensus 317 ~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~m-ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~ 395 (920)
T 1mhs_A 317 NPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYL-AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT 395 (920)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBC
T ss_pred CcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHH-HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEee
Confidence 3678899999999999999999999999999999999 999999999999999999999999999999999999999875
Q ss_pred CCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCC--ccccccceEEEecCCCCCCeEEEEEE
Q 044228 136 GEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSL--NVDQNLSIVQYRKLSSHNKVCGVLMK 213 (703)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~--~~~~~~~~l~~~~F~s~~k~msviv~ 213 (703)
.+. +..+ +.+ +..++|++.. ...+||+|.|+++++++.+. .....+++++.+||+|.+|||+++++
T Consensus 396 ~~g-~~~~-------~ll--~~a~l~~~~~--~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~ 463 (920)
T 1mhs_A 396 VAG-VDPE-------DLM--LTACLAASRK--KKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVE 463 (920)
T ss_dssp CSC-CCCT-------HHH--HHHHHSCCCS--SCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEEC
T ss_pred cCC-CCHH-------HHH--HHHHHhcCCc--ccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEE
Confidence 432 1111 222 2223332211 11249999999999987654 23456889999999999999999998
Q ss_pred eCCCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEE
Q 044228 214 INGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHL 292 (703)
Q Consensus 214 ~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~ 292 (703)
.++|+ .++++|||||.++++|+.. .++ ++.++++.+.+++++++|+||+++|++. .|++++|
T Consensus 464 ~~~g~----~~~~~KGape~il~~c~~~-------~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~------~e~~l~~ 526 (920)
T 1mhs_A 464 SPQGE----RITCVKGAPLFVLKTVEED-------HPIPEEVDQAYKNKVAEFATRGFRSLGVARKR------GEGSWEI 526 (920)
T ss_dssp CSSSS----CEEEEEECHHHHHHHCCCS-------SCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS------SSCSCCC
T ss_pred eCCCc----EEEEEeCCHHHHHHhcccc-------CCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec------cccccEE
Confidence 76665 6688999999999999741 234 6667889999999999999999999985 3688999
Q ss_pred EEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC--CCCceeeechhhhccCHHHHHHhhccC
Q 044228 293 LALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP--ESNDIALEGEQFRELNSTERMAKLDSM 366 (703)
Q Consensus 293 lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~~~vi~g~~l~~~~~~~~~~~~~~~ 366 (703)
+|++++ |||++++|++||++||+++|+|||++.||.+||+++||... +....+++|+ +.++++++.+.+.++
T Consensus 527 lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~ 604 (920)
T 1mhs_A 527 LGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAA 604 (920)
T ss_dssp CBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTT
T ss_pred EEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhC
Confidence 999999 99999999999999999999999999999999999999742 1234566776 566777888888889
Q ss_pred ceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccc
Q 044228 367 TLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGR 444 (703)
Q Consensus 367 ~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR 444 (703)
.+|+|++|+||.++|+.+|++|++|+|+|| |.||+|||++|||||||| +|+++|+++||+++. +|+++.+++++||
T Consensus 605 ~V~arv~P~~K~~iV~~Lq~~g~~Vam~GD-GvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR 682 (920)
T 1mhs_A 605 DGFAEVFPQHKYNVVEILQQRGYLVAMTGD-GVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSR 682 (920)
T ss_dssp SCEESCCSTHHHHHHHHHHTTTCCCEECCC-CGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHH
T ss_pred eEEEEeCHHHHHHHHHHHHhCCCeEEEEcC-CcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999 799999999999998 9999999999999
Q ss_pred hhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCH
Q 044228 445 CAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDK 524 (703)
Q Consensus 445 ~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~ 524 (703)
++|+||++++.|.++.|+....+........ ..|+++.|++|+|++.+. |++++++++++.+ ++|+.++. +
T Consensus 683 ~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~-~~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~----~ 753 (920)
T 1mhs_A 683 QIFHRMYAYVVYRIALSIHLEIFLGLWIAIL-NRSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNL----P 753 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-SCCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCS----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchH----H
Confidence 9999999999999999997644333323333 345899999999999996 8999999998653 56766543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc-----CCcccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHH
Q 044228 525 VMWKHAAVQVLCQVVVLLIFQFAGQVI-----PGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVV 599 (703)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 599 (703)
+++..++..|++.++..++.+++.... +..+....+|++|++++++|+++.+++|+ ..++|++ +.|++++++
T Consensus 754 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~--~~~~~~~-~~~~~~~~~ 830 (920)
T 1mhs_A 754 KLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRA--NGPFWSS-IPSWQLSGA 830 (920)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSC--SSSCSCC-SCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHhcc--chhhhcC-chHHHHHHH
Confidence 333334455555555444433222110 11123457899999999999999999998 3446664 478888777
Q ss_pred HHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 044228 600 FVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFL 653 (703)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~ 653 (703)
+++..++++++.+ .+ +|++.++++.+|+.+++++++.+++.++.|++.++..
T Consensus 831 ~~~~~~~~~~~~~-~~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 882 (920)
T 1mhs_A 831 IFLVDILATCFTI-WG-WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSV 882 (920)
T ss_dssp HHHHHHHHHHHHS-SS-STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCC
T ss_pred HHHHHHHHHHHHH-hh-hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 7777776665544 33 8899999999999999999999999999998766653
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-81 Score=738.65 Aligned_cols=555 Identities=16% Similarity=0.183 Sum_probs=429.2
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.|+++| +|+|++||+++++|+||++|+||||||||||+|+|+|.+....
T Consensus 269 ~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~-ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 347 (885)
T 3b8c_A 269 KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL-SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE 347 (885)
T ss_dssp CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH-TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe
Confidence 345578899999999999999999999999999999 9999999999999999999999999999999999999743211
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
.+.. ....++++.....+ +. ..++||+|.|+++++++.. ..++.++.++.+||+|.+|+|+++++..+
T Consensus 348 --~~~~---~~~~~~ll~~aa~~--~~----~~~~~p~~~Al~~~~~~~~-~~~~~~~~~~~~pF~s~~k~~sv~~~~~~ 415 (885)
T 3b8c_A 348 --VFCK---GVEKDQVLLFAAMA--SR----VENQDAIDAAMVGMLADPK-EARAGIREVHFLPFNPVDKRTALTYIDGS 415 (885)
T ss_dssp --SSCS---STTHHHHHHHHHHH--CC----SSSCCSHHHHHHHTTCCTT-CCCCSSCCBCCCCCCTTTCCCCCBBCSSS
T ss_pred --ccCC---CCCHHHHHHHHHHH--hC----CCCCCchHHHHHHHhhchh-hHhhcCceeecccCCcccceEEEEEEecC
Confidence 0110 00112333333222 21 2379999999999875321 23456778889999999999999988655
Q ss_pred CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC--cccccccCcEEEE
Q 044228 217 GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE--VSEIKENGLHLLA 294 (703)
Q Consensus 217 ~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~--~~~~~e~~l~~lG 294 (703)
|+ +++++|||||.++++|+.. ++.++++.+.+++++++|+|++++|+++++ ..+..|++++|+|
T Consensus 416 g~----~~~~~KGa~e~il~~c~~~----------~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lG 481 (885)
T 3b8c_A 416 GN----WHRVSKGAPEQILELAKAS----------NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVG 481 (885)
T ss_dssp SC----BCBCCCCSGGGTSSSSCCC----------STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCE
T ss_pred Cc----EEEEEeCCHHHHHHhccCc----------hhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEE
Confidence 65 6788999999999999741 122356778889999999999999999876 3455688999999
Q ss_pred EEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhc-cCHHHHHHhhccCceE
Q 044228 295 LAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRE-LNSTERMAKLDSMTLM 369 (703)
Q Consensus 295 ~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~-~~~~~~~~~~~~~~v~ 369 (703)
++++ |||++++|++|+++||+++|+|||++.||.++|+++||..+.....+++|.+++. +.++++.+.+.++.+|
T Consensus 482 li~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~ 561 (885)
T 3b8c_A 482 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGF 561 (885)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCE
T ss_pred EEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEE
Confidence 9999 9999999999999999999999999999999999999975322345778888876 6666778888899999
Q ss_pred EEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhh
Q 044228 370 GSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAY 447 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~ 447 (703)
+|++|+||.++|+.+|++|++|+|+|| |.||+|||++|||||||| +|+++|+++||+++. +++++.+++++||++|
T Consensus 562 arv~P~~K~~iV~~lq~~g~~Vam~GD-GvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~ 639 (885)
T 3b8c_A 562 AGVFPEHKYEIVKKLQERKHIVGMTGD-GVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIF 639 (885)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCCCBCCC-SSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHH
T ss_pred EEECHHHHHHHHHHHHHCCCeEEEEcC-CchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999999 999999999999999999 799999999999998 8999999999999999
Q ss_pred hchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHH
Q 044228 448 CNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMW 527 (703)
Q Consensus 448 ~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~ 527 (703)
+||++++.|++.+|+..++..++ .....+.|++++|++|+|++.+..+ ++++++++++. ++|. ... .+.++
T Consensus 640 ~ni~~~i~~~l~~n~~~~~~~~~-~~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p~---~~~-~~~~~ 710 (885)
T 3b8c_A 640 QRMKNYTIYAVSITIRIVFGFML-IALIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTPD---SWK-LKEIF 710 (885)
T ss_dssp HHHHHHHHHHHHHTTTTTSTTHH-HHSSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCCC---STT-TTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCCc---chh-HHHHH
Confidence 99999999999999965443333 3345577999999999999999865 88888776542 2232 222 25555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc------cCCcc-----cccccc-hhhHHHHHHHHHHhhheeecccccccccccchHH
Q 044228 528 KHAAVQVLCQVVVLLIFQFAGQV------IPGMN-----RDIRKA-MTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKIN 595 (703)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~t-~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~ 595 (703)
...+..|+++++..+.++++... .++.+ ....+| ++|..+++.|+ +.+++|+.+ +++.....|++
T Consensus 711 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~--~~~~~~~~~~~ 787 (885)
T 3b8c_A 711 ATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS--WSFVERPGALL 787 (885)
T ss_dssp TTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT--TTSTTSTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCC--CCcccCccHHH
Confidence 55666777777766655544321 11211 122334 45556677775 789999842 33322224444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 596 FLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
.+..++..++++++.++....++++.++++.+|+.+++++++.+++.++.|++.|+.
T Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 844 (885)
T 3b8c_A 788 MIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYI 844 (885)
T ss_dssp SGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444333333333333332233456899999999999999999999999999887654
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-58 Score=532.47 Aligned_cols=325 Identities=20% Similarity=0.255 Sum_probs=287.8
Q ss_pred HHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECC
Q 044228 58 KISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGE 137 (703)
Q Consensus 58 ~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~ 137 (703)
+..++.+++++++++|||+|++++|++++.+++++ +|+|+++|+++++|++|++|+||||||||||+|+|+|.++...+
T Consensus 367 ~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~-a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~ 445 (736)
T 3rfu_A 367 LSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG-AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDD 445 (736)
T ss_dssp TTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH-HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESS
T ss_pred HHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH-hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecC
Confidence 45689999999999999999999999999999999 99999999999999999999999999999999999999998432
Q ss_pred eecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCC
Q 044228 138 KDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGG 217 (703)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~ 217 (703)
. . .++.+.+.... ++.++||+++|+++++++.+. +.....+|++.+++ ++....+ |
T Consensus 446 ~--~-------~~~~l~~aa~l-------e~~s~hPla~Aiv~~a~~~~~------~~~~~~~f~~~~g~-gv~~~~~-g 501 (736)
T 3rfu_A 446 F--V-------EDNALALAAAL-------EHQSEHPLANAIVHAAKEKGL------SLGSVEAFEAPTGK-GVVGQVD-G 501 (736)
T ss_dssp S--C-------HHHHHHHHHHH-------HHSSCCHHHHHHHHHHHTTCC------CCCCCSCCCCCTTT-EEEECSS-S
T ss_pred C--C-------HHHHHHHHHHH-------hhcCCChHHHHHHHHHHhcCC------CccCcccccccCCc-eEEEEEC-C
Confidence 1 1 12455554444 567999999999999997765 22334578888754 6766654 4
Q ss_pred CcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEe
Q 044228 218 DEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAG 297 (703)
Q Consensus 218 ~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~ 297 (703)
++ + .+|+++.+.+.+.. .+.+.+..++++++|+|++++|++. +++|+++
T Consensus 502 ~~---~---~~G~~~~~~~~~~~--------------~~~~~~~~~~~~~~G~~vl~va~d~-----------~~~G~i~ 550 (736)
T 3rfu_A 502 HH---V---AIGNARLMQEHGGD--------------NAPLFEKADELRGKGASVMFMAVDG-----------KTVALLV 550 (736)
T ss_dssp SC---E---EEESHHHHHHHCCC--------------CHHHHHHHHHHHHTTCEEEEEEETT-----------EEEEEEE
T ss_pred EE---E---EEcCHHHHHHcCCC--------------hhHHHHHHHHHHhcCCeEEEEEECC-----------EEEEEEE
Confidence 32 4 45999988665432 1345667888999999999999988 9999999
Q ss_pred e----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC
Q 044228 298 L----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL 373 (703)
Q Consensus 298 ~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~ 373 (703)
+ |++++++|++|+++|++++|+|||+..+|..+|+++|+.. ++++++
T Consensus 551 i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~-----------------------------v~a~~~ 601 (736)
T 3rfu_A 551 VEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK-----------------------------VVAEIM 601 (736)
T ss_dssp EECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC-----------------------------EECSCC
T ss_pred eeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE-----------------------------EEEecC
Confidence 9 9999999999999999999999999999999999999986 999999
Q ss_pred hhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchh
Q 044228 374 AADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQ 451 (703)
Q Consensus 374 P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~ 451 (703)
|+||.++|+.+|++|+.|+|+|| |.||+|||++||+||||| +|+|.++++||+++. +++++.+++++||++++||+
T Consensus 602 P~~K~~~v~~l~~~g~~V~~vGD-G~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~ 679 (736)
T 3rfu_A 602 PEDKSRIVSELKDKGLIVAMAGD-GVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIR 679 (736)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEEC-SSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEEC-ChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999 799999999999998 99999999999999999999
Q ss_pred hhhhHHhhhhhHHHHHHH
Q 044228 452 KFTKLQLTGCASGLLITL 469 (703)
Q Consensus 452 ~~~~~~l~~n~~~~~~~~ 469 (703)
+|+.|++.||++.+++++
T Consensus 680 qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 680 QNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999876
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-55 Score=512.58 Aligned_cols=336 Identities=17% Similarity=0.195 Sum_probs=285.3
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++..++++++++|||+|++++|+++..+++++ +|+|++||+++++|+||++|++|||||||||+|+|+|.++...
T Consensus 350 ~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~-a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~ 428 (723)
T 3j09_A 350 PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG-AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL 428 (723)
T ss_dssp TTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH-HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEES
T ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH-HHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeC
Confidence 445578899999999999999999999999999999 9999999999999999999999999999999999999999886
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+.. .++.+.+...+ +..++||++.|+++++++.|.... ...+|++.. +.++..
T Consensus 429 ~~~---------~~~~l~~aa~~-------e~~s~hP~~~Ai~~~a~~~~~~~~------~~~~~~~~~-g~g~~~---- 481 (723)
T 3j09_A 429 NGD---------ERELLRLAAIA-------ERRSEHPIAEAIVKKALEHGIELG------EPEKVEVIA-GEGVVA---- 481 (723)
T ss_dssp SSC---------HHHHHHHHHHH-------HTTCCSHHHHHHHHHHHHTTCCCC------SCCCCEEET-TTEEEE----
T ss_pred CCC---------HHHHHHHHHHH-------hccCCCchhHHHHHHHHhcCCCcC------CccceEEec-CCceEE----
Confidence 421 12455555544 667999999999999998776211 111233333 223332
Q ss_pred CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEE
Q 044228 217 GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA 296 (703)
Q Consensus 217 ~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~ 296 (703)
.. +. +|+++.+.+.... .++++.+..++++++|+|++++|++. +++|++
T Consensus 482 ~~----~~---~g~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~~va~~~-----------~~~G~i 530 (723)
T 3j09_A 482 DG----IL---VGNKRLMEDFGVA-------------VSNEVELALEKLEREAKTAVIVARNG-----------RVEGII 530 (723)
T ss_dssp TT----EE---EECHHHHHHTTCC-------------CCHHHHHHHHHHHTTTCEEEEEEETT-----------EEEEEE
T ss_pred EE----EE---ECCHHHHHhcCCC-------------ccHHHHHHHHHHHhcCCeEEEEEECC-----------EEEEEE
Confidence 22 43 5999887553321 12467778889999999999999977 999999
Q ss_pred ee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 297 GL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 297 ~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++ |++++++|+.|+++|++++|+|||+..+|.++|+++|+.. +++++
T Consensus 531 ~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-----------------------------~~~~~ 581 (723)
T 3j09_A 531 AVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-----------------------------VIAEV 581 (723)
T ss_dssp EEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----------------------------EECSC
T ss_pred eecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-----------------------------EEccC
Confidence 99 9999999999999999999999999999999999999986 99999
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhch
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i 450 (703)
+|+||.++++.+|++ +.|+|+|| |.||+|||++||+||||| +|++.++++||+++. +++.+.+++++||++++++
T Consensus 582 ~P~~K~~~v~~l~~~-~~v~~vGD-g~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i 658 (723)
T 3j09_A 582 LPHQKSEEVKKLQAK-EVVAFVGD-GINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658 (723)
T ss_dssp CTTCHHHHHHHHTTT-CCEEEEEC-SSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcC-CeEEEEEC-ChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 89999999 999999999999999999 799999999999997 9999999999999999999
Q ss_pred hhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHH
Q 044228 451 QKFTKLQLTGCASGLLITLVTTLILEESPITSI 483 (703)
Q Consensus 451 ~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~ 483 (703)
++|+.|+++||++.+++++.+........++|+
T Consensus 659 ~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~ 691 (723)
T 3j09_A 659 KQNIFWALIYNVILIPAAAGLLYPIFGVVFRPE 691 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccCHH
Confidence 999999999999999887765332223344443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-55 Score=506.22 Aligned_cols=323 Identities=18% Similarity=0.218 Sum_probs=279.1
Q ss_pred HHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECC
Q 044228 58 KISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGE 137 (703)
Q Consensus 58 ~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~ 137 (703)
+..++..++++++++|||+|++++|+++..++.++ +|+|++||+++++|++|++|++|||||||||+|+|++.++...+
T Consensus 273 ~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~-a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~ 351 (645)
T 3j08_A 273 LLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG-AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN 351 (645)
T ss_dssp CCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH-HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCC
Confidence 34466779999999999999999999999999999 99999999999999999999999999999999999999998864
Q ss_pred eecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCC
Q 044228 138 KDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGG 217 (703)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~ 217 (703)
.. .++.+.+...+ +..++||++.|+++++++.|....+ ..+|++..+ .++.. .
T Consensus 352 ~~---------~~~~l~~aa~~-------e~~s~hPla~Aiv~~a~~~g~~~~~------~~~~~~~~g-~g~~~----~ 404 (645)
T 3j08_A 352 GD---------ERELLRLAAIA-------ERRSEHPIAEAIVKKALEHGIELGE------PEKVEVIAG-EGVVA----D 404 (645)
T ss_dssp SC---------HHHHHHHHHHH-------HTTCCSHHHHHHHHHHHHTTCCCCS------CCCCEEETT-TEEEE----T
T ss_pred CC---------HHHHHHHHHHH-------hhcCCChhHHHHHHHHHhcCCCcCC------ccceEEecC-CceEE----E
Confidence 21 12555555554 6779999999999999987762111 112333332 23332 2
Q ss_pred CcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEe
Q 044228 218 DEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAG 297 (703)
Q Consensus 218 ~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~ 297 (703)
. + .+|+++.+.+.... .++++.+..++++++|+|++++|++. +++|+++
T Consensus 405 ~----v---~~g~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~l~va~~~-----------~~~G~i~ 453 (645)
T 3j08_A 405 G----I---LVGNKRLMEDFGVA-------------VSNEVELALEKLEREAKTAVIVARNG-----------RVEGIIA 453 (645)
T ss_dssp T----E---EEECHHHHHHTTCC-------------CCHHHHHHHHHHHTTTCCCEEEEETT-----------EEEEEEE
T ss_pred E----E---EECCHHHHHhcCCC-------------ccHHHHHHHHHHHhcCCeEEEEEECC-----------EEEEEEE
Confidence 2 4 45999887553321 12457778889999999999999987 9999999
Q ss_pred e----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC
Q 044228 298 L----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL 373 (703)
Q Consensus 298 ~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~ 373 (703)
+ ||+++++|++|+++|++++|+|||+..+|.++|+++|+.. ++++++
T Consensus 454 ~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-----------------------------~~~~~~ 504 (645)
T 3j08_A 454 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-----------------------------VIAEVL 504 (645)
T ss_dssp EECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----------------------------EECSCC
T ss_pred ecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-----------------------------EEEeCC
Confidence 9 9999999999999999999999999999999999999986 999999
Q ss_pred hhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchh
Q 044228 374 AADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQ 451 (703)
Q Consensus 374 P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~ 451 (703)
|+||.++++.+|++ +.|+|+|| |.||+||+++||+||||| +|++.++++||+++. +++.+.+++++||+++++++
T Consensus 505 P~~K~~~v~~l~~~-~~v~~vGD-g~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~ 581 (645)
T 3j08_A 505 PHQKSEEVKKLQAK-EVVAFVGD-GINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 581 (645)
T ss_dssp TTCHHHHHHHHTTT-CCEEEEEC-SSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHhhC-CeEEEEeC-CHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 89999999 999999999999999999 799999999999997 99999999999999999999
Q ss_pred hhhhHHhhhhhHHHHHHHHH
Q 044228 452 KFTKLQLTGCASGLLITLVT 471 (703)
Q Consensus 452 ~~~~~~l~~n~~~~~~~~~~ 471 (703)
+|+.|++.||++.+++++.+
T Consensus 582 ~nl~~a~~~N~~~i~la~~~ 601 (645)
T 3j08_A 582 QNIFWALIYNVILIPAAAGL 601 (645)
T ss_dssp HHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998887655
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-34 Score=299.09 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=203.1
Q ss_pred HHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeecCCCCcccccHHHHHHHHHHhcccccC
Q 044228 87 FWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLV 166 (703)
Q Consensus 87 ~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 166 (703)
.+++++ +|+||++|+++++|.++++++||||||||||+|+|.+.++. .. +++++++...
T Consensus 4 ~a~~~~-~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------~~-------~~~l~~~~~~------- 62 (263)
T 2yj3_A 4 SLYEKM-LHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------GD-------SLSLAYAASV------- 62 (263)
Confidence 467788 99999999999999999999999999999999999999875 11 1455555544
Q ss_pred CcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCC
Q 044228 167 PEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEG 246 (703)
Q Consensus 167 ~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g 246 (703)
+..+.||++.|+.+++++.|.. ....-.|.... +.++.....+.. +.+ |+++
T Consensus 63 e~~s~hp~a~ai~~~~~~~g~~------~~~~~~~~~~~-G~g~~~~~~~~~----~~~---G~~~-------------- 114 (263)
T 2yj3_A 63 EALSSHPIAKAIVKYAKEQGVK------ILEVKDFKEIS-GIGVRGKISDKI----IEV---KKAE-------------- 114 (263)
Confidence 6679999999999988765541 11111122111 122221111110 111 2221
Q ss_pred ceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCC
Q 044228 247 KSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSED 322 (703)
Q Consensus 247 ~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD 322 (703)
+|.+ +.++++. .+.|.+.+ +|++.++++.|+++|++++|+|||
T Consensus 115 ---------------------~~~~-~~~~~~~-----------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 161 (263)
T 2yj3_A 115 ---------------------NNND-IAVYING-----------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGD 161 (263)
Confidence 3444 6667766 78888777 999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCH
Q 044228 323 ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDT 402 (703)
Q Consensus 323 ~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~ 402 (703)
+..++..+++++|+.. +|+.+.|++|.+.++.++..++.|+|+|| |.||+
T Consensus 162 ~~~~~~~~~~~~gl~~-----------------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD-~~~D~ 211 (263)
T 2yj3_A 162 KEDKVKELSKELNIQE-----------------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGD-GVNDA 211 (263)
Confidence 9999999999999976 78888899999999999999999999999 99999
Q ss_pred HHHhhCCcceecCCCcchHHhhccchhh--cccccHHHHHhccchhhhchhhh
Q 044228 403 PALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQKF 453 (703)
Q Consensus 403 ~al~~AdvGIa~~~~~~~~a~~aad~vl--~~~~~l~~~i~~gR~~~~~i~~~ 453 (703)
+|+++||+|+++| ++++.+++.||+++ .++..+.++++.+|+++++|++|
T Consensus 212 ~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 212 AALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999999999999 68899999999999 49999999999999999999986
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-28 Score=254.37 Aligned_cols=274 Identities=19% Similarity=0.252 Sum_probs=209.1
Q ss_pred HHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeecCCCCcccccHHHHHHHHHHhcccccC
Q 044228 87 FWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLV 166 (703)
Q Consensus 87 ~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 166 (703)
-|.+++ +|+|+++|+++++|++++++++|||||||||.+.+.+.++...+. ..++++++....
T Consensus 8 ~~~~~~-~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~---------~~~~~l~~~~~~------- 70 (287)
T 3a1c_A 8 HGSRKG-AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG---------DERELLRLAAIA------- 70 (287)
T ss_dssp -------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS---------CHHHHHHHHHHH-------
T ss_pred hhHHHH-HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC---------CHHHHHHHHHHH-------
Confidence 367788 999999999999999999999999999999999999999887653 123555555444
Q ss_pred CcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCC
Q 044228 167 PEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEG 246 (703)
Q Consensus 167 ~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g 246 (703)
+..+.||++.|+.+++++.|..... .+..... . ++++.. .. + .+|+++.+.+.....
T Consensus 71 e~~s~hp~~~a~~~~~~~~g~~~~~-~~~~~~~-----~-G~~~~~----~~----~---~~g~~~~~~~~~~~~----- 127 (287)
T 3a1c_A 71 ERRSEHPIAEAIVKKALEHGIELGE-PEKVEVI-----A-GEGVVA----DG----I---LVGNKRLMEDFGVAV----- 127 (287)
T ss_dssp TTTCCSHHHHHHHHHHHHTTCCCCC-CSCEEEE-----T-TTEEEE----TT----E---EEECHHHHHHTTCCC-----
T ss_pred hhcCCCHHHHHHHHHHHhcCCCccc-cccceee-----c-CCCeEE----EE----E---EECCHHHHHhcCCCc-----
Confidence 6779999999999999988762111 1111111 1 222222 11 3 358776653322110
Q ss_pred ceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCC
Q 044228 247 KSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSED 322 (703)
Q Consensus 247 ~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD 322 (703)
++.+.+..+.+..+|.++++++++. .+.+.+.. +|++.++++.|+++|+++.++||+
T Consensus 128 --------~~~~~~~~~~~~~~g~~~i~~~~d~-----------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 188 (287)
T 3a1c_A 128 --------SNEVELALEKLEREAKTAVIVARNG-----------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGD 188 (287)
T ss_dssp --------CHHHHHHHHHHHHTTCEEEEEEETT-----------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred --------cHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCC
Confidence 1234556677888999999999988 88887765 999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCH
Q 044228 323 ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDT 402 (703)
Q Consensus 323 ~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~ 402 (703)
+...+..+.+.+|+.. .|....|+.|...++.++.. +.++|+|| +.||+
T Consensus 189 ~~~~~~~~l~~~gl~~-----------------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGD-s~~Di 237 (287)
T 3a1c_A 189 NWRSAEAISRELNLDL-----------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGD-GINDA 237 (287)
T ss_dssp CHHHHHHHHHHHTCSE-----------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEEC-TTTCH
T ss_pred CHHHHHHHHHHhCCce-----------------------------eeeecChHHHHHHHHHHhcC-CeEEEEEC-CHHHH
Confidence 9999999999999975 67778899999999999888 89999999 99999
Q ss_pred HHHhhCCcceecCCCcchHHhhccchhh--cccccHHHHHhccchhhhchh
Q 044228 403 PALKEADVGITEENKCTEMARECSDIVI--STVGSLLPILKLGRCAYCNIQ 451 (703)
Q Consensus 403 ~al~~AdvGIa~~~~~~~~a~~aad~vl--~~~~~l~~~i~~gR~~~~~i~ 451 (703)
+|.+.|++|++++ ++.+..+..+|+++ .++..+.++++.+|+++++|+
T Consensus 238 ~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 238 PALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 9999999999998 57777777899999 599999999999999999885
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-26 Score=235.37 Aligned_cols=270 Identities=21% Similarity=0.246 Sum_probs=204.5
Q ss_pred cccCccccccCCceeeecccccccccCceEEEEEEECCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHH
Q 044228 100 PQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLV 179 (703)
Q Consensus 100 vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~ 179 (703)
+|+++++|.+++++.|||||+||||.|+|++.++...+. . ..+++..+... +..+.||...++.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~--~-------~~~~~~~~~~~-------~~~s~~~~~~a~~ 64 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH--S-------EDELLQIAASL-------EARSEHPIAAAIV 64 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS--C-------HHHHHHHHHHH-------HTTCCSHHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC--C-------HHHHHHHHHHh-------hccCCCHHHHHHH
Confidence 588999999999999999999999999999999987654 1 12555555555 5668999999999
Q ss_pred HHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHH
Q 044228 180 SWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQ 259 (703)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~ 259 (703)
+.+++.|.... ..+.....+ +.++.... ++.. + ..|+++.+.+..... .
T Consensus 65 ~~~~~~g~~~~-~~~~~~~~~------g~~~~~~~-~~~~---~---~~~~~~~~~~~~~~~-----------------~ 113 (280)
T 3skx_A 65 EEAEKRGFGLT-EVEEFRAIP------GKGVEGIV-NGRR---Y---MVVSPGYIRELGIKT-----------------D 113 (280)
T ss_dssp HHHHHTTCCCC-CCEEEEEET------TTEEEEEE-TTEE---E---EEECHHHHHHTTCCC-----------------C
T ss_pred HHHHhcCCCCC-CccceeecC------CCEEEEEE-CCEE---E---EEecHHHHHHcCCCc-----------------h
Confidence 99998876221 112222222 12333322 2221 2 348888775543321 1
Q ss_pred HHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Q 044228 260 KLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG 335 (703)
Q Consensus 260 ~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g 335 (703)
+...++..++.+.+.++++. .++|.+.+ +|++.++++.|++.|+++.++||++...+..+.+.+|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~g 182 (280)
T 3skx_A 114 ESVEKLKQQGKTVVFILKNG-----------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG 182 (280)
T ss_dssp TTHHHHHTTTCEEEEEEETT-----------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCeEEEEEECC-----------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence 22445678899999999877 88888877 9999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 336 NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 336 i~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
+.. .|..+.|.+|...++.+.+.. .++|+|| +.||++|++.|++|++||
T Consensus 183 l~~-----------------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD-~~nDi~~~~~Ag~~va~~ 231 (280)
T 3skx_A 183 LDD-----------------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGD-GVNDAPALAQADVGIAIG 231 (280)
T ss_dssp CSE-----------------------------EECSCCGGGHHHHHHHHHTTS-CEEEEEC-TTTTHHHHHHSSEEEECS
T ss_pred Chh-----------------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeC-CchhHHHHHhCCceEEec
Confidence 976 788899999999999998876 5689999 999999999999999999
Q ss_pred CCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhh
Q 044228 416 NKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLT 459 (703)
Q Consensus 416 ~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~ 459 (703)
++.+.+++.||+++. ++..+.++++.+|++++++++|+.|++.
T Consensus 232 -~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 232 -AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp -CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred -CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 688889999999985 9999999999999999999999999864
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.3e-20 Score=178.60 Aligned_cols=125 Identities=15% Similarity=0.170 Sum_probs=108.0
Q ss_pred ccCChHHHHHHHHHHhCCC-ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCc
Q 044228 169 ISVWPTTDWLVSWAKSRSL-NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGK 247 (703)
Q Consensus 169 ~~~~p~e~Al~~~~~~~~~-~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~ 247 (703)
..+||+|.|+++++.+.+. ..++.|+++..+||+|+||||+++++.++++ +++++|||||.|+++|+.+.. +|.
T Consensus 31 ~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~----~~l~~KGApE~IL~~C~~~~~-~g~ 105 (170)
T 3gwi_A 31 GLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEH----HQLVCKGALQEILNVCSQVRH-NGE 105 (170)
T ss_dssp SCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSE----EEEEEEECHHHHHTTEEEEEE-TTE
T ss_pred CCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCC----EEEEEcCCcHHHHHHhHHHhc-CCC
Confidence 4689999999998754322 2346789999999999999999999876664 889999999999999998764 788
Q ss_pred eecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCc-----ccccccCcEEEEEEee
Q 044228 248 SFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV-----SEIKENGLHLLALAGL 298 (703)
Q Consensus 248 ~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~-----~~~~e~~l~~lG~~~~ 298 (703)
..|+ ++.++.+.+.+++|+++|+|||++|+|.++. ..+.|++|+|+|++++
T Consensus 106 ~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~ 162 (170)
T 3gwi_A 106 IVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAF 162 (170)
T ss_dssp EEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcc
Confidence 8999 8899999999999999999999999999862 2356999999999998
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-16 Score=165.89 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=108.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh--ccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL--DSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~--~~~~v~~r~~P~~ 376 (703)
||++++.++.|+++|+++.|+|||...++.++|+++|+..+ +..+... .+. ..++.+...+ +....+++..|.+
T Consensus 143 ~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~--~~~i~~n-~l~-~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 143 KEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS--NVKVVSN-FMD-FDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCT--TEEEEEE-CEE-ECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcc--cceEEee-eEE-EcccceeEeccccccchhhcccHHH
Confidence 99999999999999999999999999999999999999764 1111111 110 0000000000 1123677888999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHh---hCCcceecCC------CcchHHhhccchhhc--ccccHHHHHhc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALK---EADVGITEEN------KCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~---~AdvGIa~~~------~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
|...+..+++.++.|+|+|| |+||+||++ .||+||+||- ++++.+++++|+|+. ++..++++|.+
T Consensus 219 k~~~~~~~~~~~~~v~~vGD-GiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il~ 294 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGD-SQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSILQ 294 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEES-SGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHHH
T ss_pred HHHHHHHhhccCCEEEEEeC-cHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHHH
Confidence 99999999999999999999 999999955 9999999983 588899999999999 88888887753
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.45 E-value=5.2e-14 Score=137.31 Aligned_cols=135 Identities=15% Similarity=0.183 Sum_probs=111.3
Q ss_pred EEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 293 LALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 293 lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++.+.++++. +++.|+++|+++.++||++...+..+++++|+.. +|...
T Consensus 44 ~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~-----------------------------~f~~~ 92 (189)
T 3mn1_A 44 IKTFNTLDGQ--GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH-----------------------------LFQGR 92 (189)
T ss_dssp EEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-----------------------------EECSC
T ss_pred eeeeccccHH--HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-----------------------------HhcCc
Confidence 3333334433 8999999999999999999999999999999975 44433
Q ss_pred ChhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcc------cccHHHHHhc
Q 044228 373 LAADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIST------VGSLLPILKL 442 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~------~~~l~~~i~~ 442 (703)
.+|.+.++.+.++ .+.++|+|| +.||++|++.|++|++++ ++.+.+++.||+++.+ +..+.+.+..
T Consensus 93 --~~K~~~~~~~~~~~g~~~~~~~~vGD-~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~ 168 (189)
T 3mn1_A 93 --EDKLVVLDKLLAELQLGYEQVAYLGD-DLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILS 168 (189)
T ss_dssp --SCHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred --CChHHHHHHHHHHcCCChhHEEEECC-CHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 6677777776654 467999999 999999999999999999 6899999999999983 6778888899
Q ss_pred cchhhhchhhhhhHHhhhhh
Q 044228 443 GRCAYCNIQKFTKLQLTGCA 462 (703)
Q Consensus 443 gR~~~~~i~~~~~~~l~~n~ 462 (703)
+|.+++++++++.|.+.||-
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~ 188 (189)
T 3mn1_A 169 AQGNLEAAHSVYLEGHHHHH 188 (189)
T ss_dssp HTTCHHHHHHTTSTTC----
T ss_pred ccCcHHHHHHHHhccccccC
Confidence 99999999999999999873
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.4e-12 Score=134.34 Aligned_cols=143 Identities=16% Similarity=0.134 Sum_probs=104.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE-----eC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-----CL 373 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r-----~~ 373 (703)
+|++.+.++.|+++|+++.++||+....+..+++++|+...-.....+.... +..+ ..
T Consensus 180 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~-----------------~tg~~~~~~~~ 242 (335)
T 3n28_A 180 MPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGK-----------------LTGQVLGEVVS 242 (335)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-----------------EEEEEESCCCC
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCe-----------------eeeeecccccC
Confidence 8999999999999999999999999999999999999964200001000000 0011 12
Q ss_pred hhhHHHHHHH----HHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhh
Q 044228 374 AADKLLLVQT----AKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAY 447 (703)
Q Consensus 374 P~~K~~iv~~----lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~ 447 (703)
+..|.+.++. ++-..+.++|+|| |.||++|++.||+|++| ++.+..++.||+++. ++.++.+++.......
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGD-s~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~ 319 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGD-GANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQ 319 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeC-CHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHh
Confidence 2345444444 4334567999999 99999999999999999 588999999999988 9999999999887888
Q ss_pred hchhhhhhHHhhhh
Q 044228 448 CNIQKFTKLQLTGC 461 (703)
Q Consensus 448 ~~i~~~~~~~l~~n 461 (703)
+++++|+.|++.||
T Consensus 320 ~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 320 QKLSWKSKEGHHHH 333 (335)
T ss_dssp TCCCCC--------
T ss_pred hhhccccccccccc
Confidence 99999999999987
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=5.7e-11 Score=114.60 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=104.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.++..++|+.|+++|++++++||++...+..+++++|+.. .+... ..|.
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-----------------------------~~~~~--k~k~ 85 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-----------------------------FFLGK--LEKE 85 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-----------------------------EEESC--SCHH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-----------------------------eecCC--CCcH
Confidence 5677899999999999999999999999999999999975 34332 4566
Q ss_pred HHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHH----HHHhccchhhh
Q 044228 379 LLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLL----PILKLGRCAYC 448 (703)
Q Consensus 379 ~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~----~~i~~gR~~~~ 448 (703)
+.++.+.++ | +.++++|| +.||++|++.|+++++++ ++.+.+++.||+++. +..++. +.+...|..++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~ 163 (180)
T 1k1e_A 86 TACFDLMKQAGVTAEQTAYIGD-DSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSS 163 (180)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTH
T ss_pred HHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchh
Confidence 666655433 4 67999999 999999999999999998 688999999999988 333443 44555777889
Q ss_pred chhhhhhHHhhhh
Q 044228 449 NIQKFTKLQLTGC 461 (703)
Q Consensus 449 ~i~~~~~~~l~~n 461 (703)
+++.++.|...-+
T Consensus 164 ~~~~~~~~~~~~~ 176 (180)
T 1k1e_A 164 VFDTAQGFLKSVK 176 (180)
T ss_dssp HHHCHHHHHHHGG
T ss_pred hhhhccchhhhhc
Confidence 9998888876543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.09 E-value=7.1e-11 Score=117.04 Aligned_cols=116 Identities=15% Similarity=0.217 Sum_probs=94.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
+++. +++.|+++|+++.++||++...+..+++++|+.. +|... ..|.
T Consensus 80 ~d~~--~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~-----------------------------~f~~~--k~K~ 126 (211)
T 3ij5_A 80 RDGY--GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH-----------------------------LYQGQ--SDKL 126 (211)
T ss_dssp HHHH--HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------EECSC--SSHH
T ss_pred chHH--HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------hhccc--CChH
Confidence 4444 8999999999999999999999999999999975 55544 5677
Q ss_pred HHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc-c-----cccHHHHHhccchhhh
Q 044228 379 LLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-T-----VGSLLPILKLGRCAYC 448 (703)
Q Consensus 379 ~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~-~-----~~~l~~~i~~gR~~~~ 448 (703)
+.++.+.++ .+.++|+|| +.||++|++.|+++++++ ++.+.+++.||+++. . ++.+.+.+...+..+.
T Consensus 127 ~~l~~~~~~lg~~~~~~~~vGD-s~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~~~~~~ 204 (211)
T 3ij5_A 127 VAYHELLATLQCQPEQVAYIGD-DLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRGAVREVCDLILLAQDKLE 204 (211)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHcCcCcceEEEEcC-CHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHHcCcHH
Confidence 777777654 568999999 999999999999999999 688999999999998 2 3456666655444443
Q ss_pred c
Q 044228 449 N 449 (703)
Q Consensus 449 ~ 449 (703)
+
T Consensus 205 ~ 205 (211)
T 3ij5_A 205 G 205 (211)
T ss_dssp T
T ss_pred H
Confidence 3
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.3e-11 Score=116.44 Aligned_cols=113 Identities=17% Similarity=0.183 Sum_probs=91.2
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
..|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-----------------------------~~~~~--k~k~~~~~~ 107 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-----------------------------IYQGQ--DDKVQAYYD 107 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-----------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-----------------------------EeeCC--CCcHHHHHH
Confidence 45999999999999999999999999999999975 45444 456666665
Q ss_pred HHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--c----cccHHHHHhccchhhhc
Q 044228 384 AKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--T----VGSLLPILKLGRCAYCN 449 (703)
Q Consensus 384 lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~----~~~l~~~i~~gR~~~~~ 449 (703)
+.+. .+.++++|| +.||++|++.|+++++|+ ++.+.+++.||+++. + ...+.+.+...|..+.+
T Consensus 108 ~~~~~~~~~~~~~~vGD-~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~~ 181 (195)
T 3n07_A 108 ICQKLAIAPEQTGYIGD-DLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELDV 181 (195)
T ss_dssp HHHHHCCCGGGEEEEES-SGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSCC
T ss_pred HHHHhCCCHHHEEEEcC-CHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHHH
Confidence 5443 457999999 999999999999999999 799999999999998 2 34456666656655544
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.8e-10 Score=110.71 Aligned_cols=114 Identities=15% Similarity=0.194 Sum_probs=89.5
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHH
Q 044228 305 TVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTA 384 (703)
Q Consensus 305 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~l 384 (703)
+++.|+++|+++.++||++...+..+++++|+. +++.. ..|.+.++.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------~~~~~--~~k~~~l~~~ 94 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------VLHGI--DRKDLALKQW 94 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------EEESC--SCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------eEeCC--CChHHHHHHH
Confidence 799999999999999999999999999999985 22222 5577777666
Q ss_pred HhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcc------cccHHHHHhccchhhhchhh
Q 044228 385 KEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIST------VGSLLPILKLGRCAYCNIQK 452 (703)
Q Consensus 385 q~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~------~~~l~~~i~~gR~~~~~i~~ 452 (703)
.++ .+.++++|| +.||++|++.|++|++++ ++.+.+++.||+++.+ +..+.+.+...|..+.+..+
T Consensus 95 ~~~~~~~~~~~~~vGD-~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~~~~~~~~~~~ 170 (176)
T 3mmz_A 95 CEEQGIAPERVLYVGN-DVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIASWILGPSLDSLDKEG 170 (176)
T ss_dssp HHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTTTTC------
T ss_pred HHHcCCCHHHEEEEcC-CHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCccccccc
Confidence 554 367899999 999999999999999999 6889999999999983 56666666666665555443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.5e-10 Score=111.26 Aligned_cols=121 Identities=14% Similarity=0.120 Sum_probs=98.4
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe--ChhhHHHHHH
Q 044228 305 TVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC--LAADKLLLVQ 382 (703)
Q Consensus 305 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~--~P~~K~~iv~ 382 (703)
.|+.|+++|+++.++||++...+..+++++|+.. ++... .|+-...+.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-----------------------------~~~~~kpk~~~~~~~~~ 104 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-----------------------------YYKGQVDKRSAYQHLKK 104 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------EECSCSSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------ceeCCCChHHHHHHHHH
Confidence 5999999999999999999999999999999975 44444 3444455555
Q ss_pred HHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--c----cccHHHHHhccchhhhchhhhhhH
Q 044228 383 TAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--T----VGSLLPILKLGRCAYCNIQKFTKL 456 (703)
Q Consensus 383 ~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~----~~~l~~~i~~gR~~~~~i~~~~~~ 456 (703)
.++-....++|+|| +.||++|++.|+++++++ ++.+.+++.||+++. + +..+.+.+...|..+.++.+.+.+
T Consensus 105 ~~~~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 105 TLGLNDDEFAYIGD-DLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HhCCCHHHEEEECC-CHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 55545667999999 999999999999999998 688999999999998 3 555666777778777777666554
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.03 E-value=4e-10 Score=113.00 Aligned_cols=141 Identities=18% Similarity=0.186 Sum_probs=101.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceee--echhh-hc-------------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIAL--EGEQF-RE------------------- 353 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi--~g~~l-~~------------------- 353 (703)
.+++.++|++|+++|++++++||++...+..+++++|+..+ .....+. +|+.+ ..
T Consensus 24 ~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~ 103 (227)
T 1l6r_A 24 STKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMR 103 (227)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCB
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCC
Confidence 67889999999999999999999999999999999998642 1111222 12222 00
Q ss_pred ------------------cCHHHHHHhhc--cCce-----EEEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCCCCH
Q 044228 354 ------------------LNSTERMAKLD--SMTL-----MGSCLA--ADKLLLVQTAKEK----GHVVAFFGGSSTRDT 402 (703)
Q Consensus 354 ------------------~~~~~~~~~~~--~~~v-----~~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ND~ 402 (703)
..++++.++.. .+.+ +....| .+|...++.+.+. .+.++++|| +.||.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD-~~nD~ 182 (227)
T 1l6r_A 104 SILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD-SNNDM 182 (227)
T ss_dssp CCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC-SGGGH
T ss_pred ccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECC-cHHhH
Confidence 01122222211 1222 223345 6899988888764 246899999 99999
Q ss_pred HHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 403 PALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 403 ~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
+|++.|++|++|+ ++.+.+++.||+++. +-.++.++++
T Consensus 183 ~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 183 PMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp HHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999 789999999999987 5677877775
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=104.04 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=83.1
Q ss_pred EEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH--HcCCCCCCCCceeeechhhhccCHHHHHHhhccCce
Q 044228 291 HLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVAC--ELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTL 368 (703)
Q Consensus 291 ~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~--~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v 368 (703)
..++.+.+|++ .+|+.|+++|+++.++||+ ..+..+++ .+|+. +
T Consensus 32 ~~~~~f~~~D~--~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------------~ 77 (168)
T 3ewi_A 32 KEIISYDVKDA--IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------------T 77 (168)
T ss_dssp CCEEEEEHHHH--HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------------E
T ss_pred CEEEEEecCcH--HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------------E
Confidence 44555555555 4899999999999999999 67888888 55553 2
Q ss_pred EEEeChhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 369 MGSCLAADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 369 ~~r~~P~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
+ ..+++|.+.++.+.++ .+.++++|| +.||++|++.|+++++|+ ++.+.+++.||+++.
T Consensus 78 ~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD-~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~ 140 (168)
T 3ewi_A 78 E--VSVSDKLATVDEWRKEMGLCWKEVAYLGN-EVSDEECLKRVGLSAVPA-DACSGAQKAVGYICK 140 (168)
T ss_dssp E--CSCSCHHHHHHHHHHHTTCCGGGEEEECC-SGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECS
T ss_pred E--ECCCChHHHHHHHHHHcCcChHHEEEEeC-CHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeC
Confidence 2 1235788888777654 357999999 999999999999999999 799999999999998
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=4e-09 Score=98.59 Aligned_cols=136 Identities=15% Similarity=0.223 Sum_probs=88.7
Q ss_pred cccccccCceEEEEEEECCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhC-CCccccccc-eE
Q 044228 119 VTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSR-SLNVDQNLS-IV 196 (703)
Q Consensus 119 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~-~~~~~~~~~-~l 196 (703)
..||+|-|.+.+..+...+. ++ ..+++++.+.+ |..+.||+++|+++++++. +.......+ ..
T Consensus 13 ~~~tit~gnr~vt~v~~~~g-~~-------e~elL~lAAs~-------E~~SeHPla~AIv~~A~~~~~l~~~~~~~~~~ 77 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG-VD-------EKTLADAAQLA-------SLADETPEGRSIVILAKQRFNLRERDVQSLHA 77 (156)
T ss_dssp --------CEEEEEEEECTT-SC-------HHHHHHHHHHT-------TSSCCSHHHHHHHHHHHHHTTCCCCCHHHHTC
T ss_pred CCCceecCCCeEEEEEecCC-CC-------HHHHHHHHHHH-------hCcCCCHHHHHHHHHHHHhcCCCccccccccc
Confidence 47999999999999976532 11 12566666655 7889999999999999976 552111000 12
Q ss_pred EEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEE
Q 044228 197 QYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFA 276 (703)
Q Consensus 197 ~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A 276 (703)
...+|++..+++|+.+ +|+ -+.||+++.|.+.+... |.. .++.+.+.+++++++|.+++++|
T Consensus 78 ~~~~F~a~~G~~Gv~v---~G~------~v~vGn~~~i~~l~~~~----gi~-----~~~~~~~~~~~la~~G~T~v~VA 139 (156)
T 1svj_A 78 TFVPFTAQSRMSGINI---DNR------MIRKGSVDAIRRHVEAN----GGH-----FPTDVDQKVDQVARQGATPLVVV 139 (156)
T ss_dssp EEEEEETTTTEEEEEE---TTE------EEEEEEHHHHHHHHHHH----TCC-----CCHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceeeccccCCCCeEEE---CCE------EEEEeCcHHHHHHHHHc----CCC-----CcHHHHHHHHHHHhCCCCEEEEE
Confidence 3579999998789843 453 23569987765554321 111 12357778889999999999999
Q ss_pred EeecCcccccccCcEEEEEEee
Q 044228 277 CGQTEVSEIKENGLHLLALAGL 298 (703)
Q Consensus 277 ~~~l~~~~~~e~~l~~lG~~~~ 298 (703)
.++ .++|++++
T Consensus 140 ~d~-----------~l~GvIal 150 (156)
T 1svj_A 140 EGS-----------RVLGVIAL 150 (156)
T ss_dssp ETT-----------EEEEEEEE
T ss_pred ECC-----------EEEEEEEE
Confidence 988 99999999
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-09 Score=103.13 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=79.9
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
.+++.|+++|+++.++||++...+..+++++|+.. .+... ..|.+.++.
T Consensus 38 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-----------------------------~~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 38 AGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-----------------------------LFQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-----------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-----------------------------eeccc--CChHHHHHH
Confidence 38999999999999999999999999999999975 44433 335555444
Q ss_pred HHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 384 AKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 384 lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
+.++ .+.++|+|| +.||++|.+.|+++++++ ++.+..++.||+++.
T Consensus 87 ~~~~~~~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~ 136 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGD-DLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLE 136 (164)
T ss_dssp HHHHHTCCGGGEEEECC-SGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCC
T ss_pred HHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEec
Confidence 4332 457999999 999999999999999998 699999999999998
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.81 E-value=2e-08 Score=103.32 Aligned_cols=64 Identities=19% Similarity=0.248 Sum_probs=54.7
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.+. .+.|+++|| +.||++|++.|++|+||| ++.+.++++||+++. +-.++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGD-GYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECC-ChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 677777766654 346999999 999999999999999999 799999999999998 6677877775
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.3e-08 Score=104.79 Aligned_cols=64 Identities=14% Similarity=0.193 Sum_probs=47.0
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.+. .+.++++|| +.||++|++.|++|+||+ ++.+..|+.||+++. +-.++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGD-QGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC---CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECC-chhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 477777776654 246999999 999999999999999999 799999999999987 6777887775
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.8e-08 Score=104.21 Aligned_cols=65 Identities=15% Similarity=0.145 Sum_probs=54.8
Q ss_pred hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
..|...++.+.+. .+.|+++|| +.||++|++.|++|+||+ ++.+.+++.||+++. +-.++.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGH-QYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECC-chhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 4577777776654 246899999 999999999999999999 899999999999988 5667887776
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.5e-08 Score=110.93 Aligned_cols=130 Identities=22% Similarity=0.213 Sum_probs=101.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCcee-eechhhhccCHHHHHHhhccCceEEE-----e
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIA-LEGEQFRELNSTERMAKLDSMTLMGS-----C 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~v-i~g~~l~~~~~~~~~~~~~~~~v~~r-----~ 372 (703)
.|++.+.++.|+++|+++.++||.....+..+++.+|+...-.+.+. .+|. +.++ .
T Consensus 258 ~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~------------------~tg~~~~~v~ 319 (415)
T 3p96_A 258 MPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGT------------------LTGRVVGPII 319 (415)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTE------------------EEEEECSSCC
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCE------------------EEeeEccCCC
Confidence 89999999999999999999999999999999999999642000010 1110 1111 1
Q ss_pred ChhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchh
Q 044228 373 LAADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCA 446 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~ 446 (703)
.+..|.++++.+.++ .+.++++|| |.||++|++.|++|+++ ++.+..++.||+++. ++..+..++..+|.-
T Consensus 320 ~~kpk~~~~~~~~~~~gi~~~~~i~vGD-~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 320 DRAGKATALREFAQRAGVPMAQTVAVGD-GANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCcchHHHHHHHHHHcCcChhhEEEEEC-CHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 256777777766553 256999999 99999999999999999 478888889999988 999999999887765
Q ss_pred hhc
Q 044228 447 YCN 449 (703)
Q Consensus 447 ~~~ 449 (703)
+..
T Consensus 397 ~~~ 399 (415)
T 3p96_A 397 IEA 399 (415)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.3e-08 Score=103.47 Aligned_cols=65 Identities=17% Similarity=0.184 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccch--hhc--ccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI--VIS--TVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~--vl~--~~~~l~~~i~ 441 (703)
..|...++.+.+. | +.++++|| +.||++|++.|++|+||+ ++.+.+|++||+ ++. +-.++.++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD-~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGD-GMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECC-cHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4587777777654 3 46999999 999999999999999999 899999999995 444 6777887775
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.71 E-value=1.7e-08 Score=99.14 Aligned_cols=126 Identities=16% Similarity=0.124 Sum_probs=92.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCc-eEEE--eChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMT-LMGS--CLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~-v~~r--~~P~ 375 (703)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++...+- ... .++. ....
T Consensus 77 ~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~-------------~~~~~~~~~~~~~k 141 (217)
T 3m1y_A 77 FEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAA--FSNTLIVEND-------------ALNGLVTGHMMFSH 141 (217)
T ss_dssp CBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEE--EEEEEEEETT-------------EEEEEEEESCCSTT
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchh--ccceeEEeCC-------------EEEeeeccCCCCCC
Confidence 89999999999999999999999999999999999998752 1111111000 000 0010 1245
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhc
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
.|.+.++.+.+. .+.++++|| +.||++|++.|++++++ ++.+..++.||+++. ++..+..++.+
T Consensus 142 ~k~~~~~~~~~~~g~~~~~~i~vGD-s~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 142 SKGEMLLVLQRLLNISKTNTLVVGD-GANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp HHHHHHHHHHHHHTCCSTTEEEEEC-SGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred ChHHHHHHHHHHcCCCHhHEEEEeC-CHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 566666655443 356899999 99999999999999999 578888899999998 88888877764
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.68 E-value=2.3e-08 Score=106.02 Aligned_cols=157 Identities=15% Similarity=0.111 Sum_probs=103.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeech------------------hhhccCHHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGE------------------QFRELNSTERM 360 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~------------------~l~~~~~~~~~ 360 (703)
++++.+.++.|++ |+++.++||++...+..+++.+++.... ....+..+ .+....++++
T Consensus 105 ~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l- 181 (332)
T 1y8a_A 105 VPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL-HGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF- 181 (332)
T ss_dssp CTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE-EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH-
T ss_pred HHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh-cccccchhhhccccccceeEEecCHHHHhhhhHHHH-
Confidence 7899999999999 9999999999977777778887774210 00001101 0000000111
Q ss_pred HhhccC-------ceE---EEeChhhHHHHHHHHHhCC--CEEEEEeCCCCCCHHHHhhC----CcceecCCCcchHHhh
Q 044228 361 AKLDSM-------TLM---GSCLAADKLLLVQTAKEKG--HVVAFFGGSSTRDTPALKEA----DVGITEENKCTEMARE 424 (703)
Q Consensus 361 ~~~~~~-------~v~---~r~~P~~K~~iv~~lq~~g--~~v~~iGD~G~ND~~al~~A----dvGIa~~~~~~~~a~~ 424 (703)
+.+.++ .+. --..+.+|...++.++... ++|+++|| |.||++|++.| ++|||| ++.+.+++
T Consensus 182 ~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GD-s~NDi~ml~~A~~~~g~~vam--na~~~lk~ 258 (332)
T 1y8a_A 182 RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGD-SISDYKMFEAARGLGGVAIAF--NGNEYALK 258 (332)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEEC-SGGGHHHHHHHHHTTCEEEEE--SCCHHHHT
T ss_pred HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeC-cHhHHHHHHHHhhcCCeEEEe--cCCHHHHh
Confidence 111110 011 1123567988888776543 55999999 99999999999 999999 58999999
Q ss_pred ccchhhc--ccccHHHH----Hhccchhhhchhh-------hhhHHhhhhh
Q 044228 425 CSDIVIS--TVGSLLPI----LKLGRCAYCNIQK-------FTKLQLTGCA 462 (703)
Q Consensus 425 aad~vl~--~~~~l~~~----i~~gR~~~~~i~~-------~~~~~l~~n~ 462 (703)
.||+++. +..++.++ +.+||..+ ++-+ ++.+....|.
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 308 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDF 308 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCH
Confidence 9999987 56555554 45789888 5555 4555444443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.6e-08 Score=104.92 Aligned_cols=128 Identities=15% Similarity=0.160 Sum_probs=92.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE-EeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG-SCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~-r~~P~~K 377 (703)
.|++.+.++.|+++|+++.++||.....+..+.+.+|+...-......++..+.. .+.. -..+..|
T Consensus 181 ~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg-------------~i~~~~~~~kpk 247 (317)
T 4eze_A 181 SPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD-------------NITLPIMNAANK 247 (317)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE-------------EECSSCCCHHHH
T ss_pred CcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee-------------eEecccCCCCCC
Confidence 8999999999999999999999999999999999999965200011111100000 0000 0134566
Q ss_pred HHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhc
Q 044228 378 LLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 378 ~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
.++++.+.++ ...++|+|| +.||++|.+.|++|++++ +.+..++.||.++. ++..+.+++++
T Consensus 248 p~~~~~~~~~lgv~~~~~i~VGD-s~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~~ 315 (317)
T 4eze_A 248 KQTLVDLAARLNIATENIIACGD-GANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIED 315 (317)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTCS
T ss_pred HHHHHHHHHHcCCCcceEEEEeC-CHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHHh
Confidence 6666555432 357999999 999999999999999994 67777778888877 88888877654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.68 E-value=5.2e-09 Score=101.16 Aligned_cols=117 Identities=21% Similarity=0.286 Sum_probs=90.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
++++.+.++.|++.|+++.++|+++...+..+ +.+|+... ..........+ --....|..|.
T Consensus 81 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~----------------~~~~~~~~~k~ 142 (201)
T 4ap9_A 81 SPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGKF----------------QGIRLRFRDKG 142 (201)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTEE----------------EEEECCSSCHH
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCce----------------ECCcCCccCHH
Confidence 89999999999999999999999998888888 88887541 01111111000 00345667899
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
..++.+ ..+.++++|| +.||++|++.|++|++|+ ++.+ .||+++.++..+.++++
T Consensus 143 ~~l~~l--~~~~~i~iGD-~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~~~el~~~l~ 197 (201)
T 4ap9_A 143 EFLKRF--RDGFILAMGD-GYADAKMFERADMGIAVG-REIP----GADLLVKDLKELVDFIK 197 (201)
T ss_dssp HHHGGG--TTSCEEEEEC-TTCCHHHHHHCSEEEEES-SCCT----TCSEEESSHHHHHHHHH
T ss_pred HHHHhc--CcCcEEEEeC-CHHHHHHHHhCCceEEEC-CCCc----cccEEEccHHHHHHHHH
Confidence 998888 5567899999 999999999999999998 5665 78999888877877765
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.67 E-value=1.9e-08 Score=104.01 Aligned_cols=65 Identities=15% Similarity=0.217 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
..|...++.+.+. | +.|+++|| +.||.+|++.|++|+||+ ++.+.+|+.||+++. +-.++.++|+
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD-~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGD-NLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECC-CHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 3488777777654 2 46999999 999999999999999999 899999999999998 6667887775
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=3.8e-08 Score=95.84 Aligned_cols=125 Identities=20% Similarity=0.245 Sum_probs=86.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE-eChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r-~~P~~K 377 (703)
.+++.++++.|+++|+++.++||+....+..+.+.+|+...-..........+. ..+... ..+..|
T Consensus 78 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~K 144 (211)
T 1l7m_A 78 TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLT-------------GDVEGEVLKENAK 144 (211)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE-------------EEEECSSCSTTHH
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEc-------------CCcccCccCCccH
Confidence 678999999999999999999999998888888888875310000000000000 000000 124567
Q ss_pred HHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcc--cccHHHH
Q 044228 378 LLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIST--VGSLLPI 439 (703)
Q Consensus 378 ~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~--~~~l~~~ 439 (703)
.+.++.+.++ | +.++++|| +.||++|++.|+++++|+ +.+..+..||+++.+ +..+..+
T Consensus 145 ~~~l~~~~~~lgi~~~~~~~iGD-~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 145 GEILEKIAKIEGINLEDTVAVGD-GANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGGG
T ss_pred HHHHHHHHHHcCCCHHHEEEEec-ChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHHh
Confidence 6666655442 3 46999999 999999999999999997 456667789998874 7766543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.64 E-value=2.9e-08 Score=98.88 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=94.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.++... ...-.|+--.
T Consensus 106 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 167 (237)
T 4ex6_A 106 YPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR--LTVIAGDDSVE----------------RGKPHPDMAL 167 (237)
T ss_dssp CTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT--CSEEECTTTSS----------------SCTTSSHHHH
T ss_pred CCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh--eeeEEeCCCCC----------------CCCCCHHHHH
Confidence 78999999999999999999999999999999999998643 23344333211 1111233334
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---ceecCCCcchHHhh-ccchhhcccccHHHHHhccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEMARE-CSDIVISTVGSLLPILKLGR 444 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~~~~a~~-aad~vl~~~~~l~~~i~~gR 444 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++ +|++|.+..+..++ .||+++.++..+.++++.++
T Consensus 168 ~~~~~lg~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 168 HVARGLGIPPERCVVIGD-GVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHHC-
T ss_pred HHHHHcCCCHHHeEEEcC-CHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHccC
Confidence 455555444567999999 9999999999999 89888434344444 79999999999998887664
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=4.8e-08 Score=94.61 Aligned_cols=95 Identities=16% Similarity=0.254 Sum_probs=78.2
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
.+++.|+++|+++.++||++...+..+++++|+.. ++... ..|.+.++.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-----------------------------~~~~~--kpk~~~~~~ 108 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-----------------------------LYQGQ--SNKLIAFSD 108 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------EECSC--SCSHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-----------------------------eecCC--CCCHHHHHH
Confidence 48999999999999999999999999999999875 34333 334555555
Q ss_pred HHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 384 AKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 384 lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
+.++ | +.++++|| +.||+++.+.|+++++++ ++.+.+++.||+++.
T Consensus 109 ~~~~~g~~~~~~~~iGD-~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~ 158 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGD-DLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTR 158 (188)
T ss_dssp HHHHHTCCGGGEEEEES-SGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECS
T ss_pred HHHHcCCCHHHEEEECC-CHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEe
Confidence 4432 3 57999999 999999999999999998 577777888999988
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.60 E-value=7.8e-08 Score=90.41 Aligned_cols=106 Identities=15% Similarity=0.208 Sum_probs=82.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.++++.|+++|+++.++||.+...+..+.+++|+.. .|....| |.
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-----------------------------~~~~~kp--~~ 86 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-----------------------------IYTGSYK--KL 86 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-----------------------------EEECC----CH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-----------------------------hccCCCC--CH
Confidence 6788999999999999999999999999999999999874 3333222 33
Q ss_pred HHHH-HHHh---CCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHH
Q 044228 379 LLVQ-TAKE---KGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLL 437 (703)
Q Consensus 379 ~iv~-~lq~---~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~ 437 (703)
+.++ .+++ ..+.++++|| +.||+++.+.|++++++. ++.+..++.||+++. +-.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD-~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGD-DVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 3333 2233 3457999999 999999999999999987 677888888999988 434444
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.8e-07 Score=88.75 Aligned_cols=136 Identities=10% Similarity=0.109 Sum_probs=85.7
Q ss_pred cccccCceEEEEEEECCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhC-CCccccccceEEEe
Q 044228 121 GGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSR-SLNVDQNLSIVQYR 199 (703)
Q Consensus 121 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~-~~~~~~~~~~l~~~ 199 (703)
||||+|++.|.++........ ....+++.++..+ |..+.||+++||++++++. +... ....-
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~-----~~~~~lL~laaa~-------E~~SeHPlA~AIv~~a~~~~~~~~-----~~~~~ 63 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNR-----ISHHKILAIVGTA-------ESNSEHPLGTAITKYCKQELDTET-----LGTCI 63 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTT-----SCHHHHHHHHHHG-------GGSSSCHHHHHHHHHHHHHHTCSC-----CCCCB
T ss_pred CCCcCCcEEEEEEEecCCcCC-----CCHHHHHHHHHHH-------HccCCCHHHHHHHHHHHhhcCCCC-----CCCcc
Confidence 899999999999876531100 0112566666665 8889999999999999753 3210 01112
Q ss_pred cCCCCCCeEEEEEEeCCCCc---------------------------------------------ceeEEEEEeCChHHH
Q 044228 200 KLSSHNKVCGVLMKINGGDE---------------------------------------------DKIMHINWSGTASTI 234 (703)
Q Consensus 200 ~F~s~~k~msviv~~~~~~~---------------------------------------------~~~~~l~~KGa~e~i 234 (703)
.|.... +.|+.++..+.+. .++-+-+..|+++++
T Consensus 64 ~f~~i~-G~Gv~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m 142 (185)
T 2kmv_A 64 DFQVVP-GCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWM 142 (185)
T ss_dssp CCEEET-TTEEEEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHH
T ss_pred ceEEec-cceEEEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHH
Confidence 344444 4577776643000 000023455999998
Q ss_pred HhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee
Q 044228 235 LNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL 298 (703)
Q Consensus 235 ~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~ 298 (703)
.+..... ++.+.+.+.++..+|..++.+|.++ .++|++++
T Consensus 143 ~~~gi~i-------------~~~~~~~~~~~~~~G~T~V~vaidg-----------~l~g~iav 182 (185)
T 2kmv_A 143 IRNGLVI-------------NNDVNDFMTEHERKGRTAVLVAVDD-----------ELCGLIAI 182 (185)
T ss_dssp HHHTCCC-------------CHHHHHHHHHHHHTTCEEEEEEETT-----------EEEEEEEE
T ss_pred HHcCCCC-------------CHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEEE
Confidence 6532111 1234556677889999999999988 99999987
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.57 E-value=5e-08 Score=99.80 Aligned_cols=66 Identities=15% Similarity=0.195 Sum_probs=55.6
Q ss_pred hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhc
Q 044228 375 ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 375 ~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
..|...++.+.+. .+.++++|| +.||++|++.|++|+||| ++.+.+++.||+++. +-.++.++|++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGD-GQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECC-SGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECC-ChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 3477777766553 456999999 999999999999999999 799999999999998 67788888763
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.3e-07 Score=94.69 Aligned_cols=141 Identities=16% Similarity=0.171 Sum_probs=96.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeee-chh---------------hh-c-----
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALE-GEQ---------------FR-E----- 353 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~-g~~---------------l~-~----- 353 (703)
.+.+.+++++++++|++++++||+....+..+.+.+|+..+ .....+.+ |+. +. .
T Consensus 22 ~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~ 101 (231)
T 1wr8_A 22 HEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNAR 101 (231)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCCce
Confidence 56788999999999999999999999999999999987542 01111111 110 00 0
Q ss_pred ------------------cCHHHHHHhhcc----CceE-----EEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCCC
Q 044228 354 ------------------LNSTERMAKLDS----MTLM-----GSCLA--ADKLLLVQTAKEK----GHVVAFFGGSSTR 400 (703)
Q Consensus 354 ------------------~~~~~~~~~~~~----~~v~-----~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~N 400 (703)
...+.+.+.... +.+. ....| ..|...++.+.++ .+.++++|| +.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD-~~n 180 (231)
T 1wr8_A 102 TSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD-GEN 180 (231)
T ss_dssp BCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC-SGG
T ss_pred EEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECC-CHH
Confidence 012222222211 2222 23333 3587777776653 356899999 999
Q ss_pred CHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 401 DTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 401 D~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
|.+|++.|++|++|+ ++.+..++.||+++. +-.++.++++
T Consensus 181 D~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 181 DLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 999999999999998 688888889999987 4456777665
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.57 E-value=7e-08 Score=100.84 Aligned_cols=65 Identities=14% Similarity=0.176 Sum_probs=55.1
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
..|...++.+.+. | +.|+++|| +.||++|++.|++|+||+ ++.+.+++.||+++. +-.++.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GD-s~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGD-GGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECC-CHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4577777776554 2 46999999 999999999999999999 899999999999988 6667887776
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.56 E-value=7.1e-08 Score=98.52 Aligned_cols=65 Identities=22% Similarity=0.272 Sum_probs=55.7
Q ss_pred hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
..|...++.+.+. .+.++++|| +.||++|++.|++|+||+ ++.+.++++||+++. +-.++.++|+
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGD-GGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECC-cHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 4577777776654 346899999 999999999999999999 899999999999998 6778888876
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.56 E-value=5.5e-08 Score=98.90 Aligned_cols=64 Identities=22% Similarity=0.199 Sum_probs=53.5
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|..-++.+.+. .+.|+++|| +.||++|++.|++|+||| ++.+.+++.||+++. +-.++.++|+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GD-s~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGD-GLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECC-SGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECC-cHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 455556666543 356899999 999999999999999999 799999999999987 7778888776
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=5.4e-08 Score=94.90 Aligned_cols=127 Identities=12% Similarity=0.010 Sum_probs=93.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+...++.++. . ...-.|+--.
T Consensus 72 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~----------------~~kp~~~~~~ 134 (205)
T 3m9l_A 72 APGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-A----------------PPKPHPGGLL 134 (205)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-S----------------CCTTSSHHHH
T ss_pred CccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-C----------------CCCCCHHHHH
Confidence 8999999999999999999999999999999999999864210022222211 0 0111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecCCCcchHHhhccchhhcccccHHHHHhccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEENKCTEMARECSDIVISTVGSLLPILKLGR 444 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~~~~~~~a~~aad~vl~~~~~l~~~i~~gR 444 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++ +|+|+ ++.+..++.||+++.++..+...+...|
T Consensus 135 ~~~~~~g~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~~~~el~~~~~~~~ 199 (205)
T 3m9l_A 135 KLAEAWDVSPSRMVMVGD-YRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHARDCAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECSSHHHHHHHHHHTT
T ss_pred HHHHHcCCCHHHEEEECC-CHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeCCHHHHHHHHHhcc
Confidence 333333333467999999 9999999999999 99999 6777777789999999999999887543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.49 E-value=5.8e-07 Score=87.55 Aligned_cols=123 Identities=21% Similarity=0.104 Sum_probs=93.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-ceeeechhhhccCHHHHHHhhccCceEE--EeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN-DIALEGEQFRELNSTERMAKLDSMTLMG--SCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-~~vi~g~~l~~~~~~~~~~~~~~~~v~~--r~~P~ 375 (703)
.|++.+.++.|++. +++.++|+.....+..+.+.+|+... . ..+..+.+.. .-. .-.|+
T Consensus 71 ~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~~---------------~~~~~~p~p~ 132 (206)
T 1rku_A 71 LEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL--LCHKLEIDDSDR---------------VVGYQLRQKD 132 (206)
T ss_dssp CTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE--EEEEEEECTTSC---------------EEEEECCSSS
T ss_pred CccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce--ecceeEEcCCce---------------EEeeecCCCc
Confidence 89999999999999 99999999999999999999998752 1 1122221110 111 25688
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchh-hcccccHHHHHh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIV-ISTVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~v-l~~~~~l~~~i~ 441 (703)
.|...++.+...+..++++|| +.||++|.+.|++++++. ...+....+++++ +.++..+.+++.
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGD-SYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEEC-SSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeC-ChhhHHHHHhcCccEEEC-CcHHHHHHHhhhccccchHHHHHHHH
Confidence 999999999888889999999 999999999999999985 3333333344554 448888877765
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.7e-07 Score=91.43 Aligned_cols=128 Identities=18% Similarity=0.101 Sum_probs=88.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--ceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN--DIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
++++.+.++.|+++|+++.++|+.....+..+.+.+|+...... ..+....... .. ......+|..
T Consensus 84 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~ 151 (219)
T 3kd3_A 84 TDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF-----------KE-LDNSNGACDS 151 (219)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE-----------EE-EECTTSTTTC
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce-----------ec-cCCCCCCccc
Confidence 78999999999999999999999999999999999998531000 0111111000 00 0011224556
Q ss_pred HHHHHHHH-HhCCCEEEEEeCCCCCCHHHHhh----CCcceecCCCcchHHhhccchhhcccccHHHHH
Q 044228 377 KLLLVQTA-KEKGHVVAFFGGSSTRDTPALKE----ADVGITEENKCTEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 377 K~~iv~~l-q~~g~~v~~iGD~G~ND~~al~~----AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i 440 (703)
|.+.++.. .-..+.++++|| +.||++|+++ +.+|++++ +..+..+..||+++.++..+.+++
T Consensus 152 ~~~~l~~~~~~~~~~~~~vGD-~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 152 KLSAFDKAKGLIDGEVIAIGD-GYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHHHHHGGGCCSEEEEEES-SHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEEC-CHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCCHHHHHHhh
Confidence 66666554 445688999999 9999999976 34455555 466777888999988877777654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.46 E-value=2.9e-07 Score=95.09 Aligned_cols=64 Identities=14% Similarity=0.199 Sum_probs=53.6
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.+. .+.++++|| +.||++|++.|++|++|+ ++.+..++.||+++. +-.++.++|+
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD-~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGD-QENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECC-cHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 688877777653 346899999 999999999999999999 788888889999987 5667777765
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.8e-07 Score=92.50 Aligned_cols=128 Identities=11% Similarity=-0.038 Sum_probs=91.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+..|+... ...++.++... ...-.|+--.
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 154 (233)
T 3s6j_A 93 LPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDIN--KINIVTRDDVS----------------YGKPDPDLFL 154 (233)
T ss_dssp CTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTT--SSCEECGGGSS----------------CCTTSTHHHH
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhh--hheeeccccCC----------------CCCCChHHHH
Confidence 78999999999999999999999999999999999998753 23333333221 0111122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---ceecCCCcchHHhhc-cchhhcccccHHHHHhccch
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEMAREC-SDIVISTVGSLLPILKLGRC 445 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~~~~a~~a-ad~vl~~~~~l~~~i~~gR~ 445 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++ ++++|.+..+..++. ||+++.++..+.++++....
T Consensus 155 ~~~~~l~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 224 (233)
T 3s6j_A 155 AAAKKIGAPIDECLVIGD-AIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIAS 224 (233)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTCC
T ss_pred HHHHHhCCCHHHEEEEeC-CHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHhh
Confidence 333333323457999999 9999999999999 666664445554544 89999999999998885433
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.41 E-value=1.8e-07 Score=92.19 Aligned_cols=125 Identities=10% Similarity=0.060 Sum_probs=89.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.++.... ..-.|+--.
T Consensus 88 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~kp~~~~~~ 149 (226)
T 3mc1_A 88 YDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFY--FDAIVGSSLDGK----------------LSTKEDVIR 149 (226)
T ss_dssp CTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECTTSS----------------SCSHHHHHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhh--eeeeeccCCCCC----------------CCCCHHHHH
Confidence 79999999999999999999999999999999999998742 222333222110 001122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---ceecCCCcchHH--hhccchhhcccccHHHHHhcc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEMA--RECSDIVISTVGSLLPILKLG 443 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~~~~a--~~aad~vl~~~~~l~~~i~~g 443 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++ ++++|. +.... +..||+++.++..+.+++...
T Consensus 150 ~~~~~lgi~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~g~-~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 150 YAMESLNIKSDDAIMIGD-REYDVIGALKNNLPSIGVTYGF-GSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHTTTCCEEEESSSS-SCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred HHHHHhCcCcccEEEECC-CHHHHHHHHHCCCCEEEEccCC-CCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 333333333457999999 9999999999999 888873 44332 578999999998898888753
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.35 E-value=5.4e-07 Score=88.29 Aligned_cols=122 Identities=13% Similarity=0.027 Sum_probs=86.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+........+.+.+|+... ...++.+.... ...-.|+--.
T Consensus 96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~----------------~~kp~~~~~~ 157 (226)
T 1te2_A 96 LPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP----------------YSKPHPQVYL 157 (226)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS----------------CCTTSTHHHH
T ss_pred CccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhh--CcEEEeccccC----------------CCCCChHHHH
Confidence 68899999999999999999999999888888888887642 12233222110 0011133334
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceec----CCCcchHHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE----ENKCTEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~----~~~~~~~a~~aad~vl~~~~~l~~~i 440 (703)
.+.+.+.-....++++|| +.||++|++.|++++++ + ++.+..+..||+++.++..+..-+
T Consensus 158 ~~~~~~~i~~~~~i~iGD-~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~~~el~~~~ 221 (226)
T 1te2_A 158 DCAAKLGVDPLTCVALED-SVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSSLTELTAKD 221 (226)
T ss_dssp HHHHHHTSCGGGEEEEES-SHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSCGGGCCHHH
T ss_pred HHHHHcCCCHHHeEEEeC-CHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECCHHHHhHHH
Confidence 444544444567999999 99999999999999997 4 344455778999988766665433
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.28 E-value=6.8e-07 Score=88.37 Aligned_cols=127 Identities=21% Similarity=0.164 Sum_probs=85.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC------ 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~------ 372 (703)
.|++.+.++.|+++|+++.++|+.....+..+.+.+|+........++.-. . ...+.+.-
T Consensus 88 ~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~-~-------------~~~~~~~~~~~~~~ 153 (225)
T 1nnl_A 88 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY-F-------------NGEYAGFDETQPTA 153 (225)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC-T-------------TSCEEEECTTSGGG
T ss_pred CccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEc-C-------------CCcEecCCCCCccc
Confidence 899999999999999999999999999999999999986310000000000 0 00011111
Q ss_pred ChhhHHHHHHHHHhC-C-CEEEEEeCCCCCCHHHHhhCCcceecCCCc-chHHhhccchhhcccccHHHHH
Q 044228 373 LAADKLLLVQTAKEK-G-HVVAFFGGSSTRDTPALKEADVGITEENKC-TEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~-g-~~v~~iGD~G~ND~~al~~AdvGIa~~~~~-~~~a~~aad~vl~~~~~l~~~i 440 (703)
.+..|.++++.+.++ | ..++++|| +.||+.+.++|+++|+++... .+.....+|+++.++..+.+++
T Consensus 154 ~~~~Kp~~~~~~~~~~~~~~~~~vGD-s~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 154 ESGGKGKVIKLLKEKFHFKKIIMIGD-GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEES-SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred CCCchHHHHHHHHHHcCCCcEEEEeC-cHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 123676666665443 3 57999999 999999999999988887322 2334456888887777766554
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.28 E-value=6.3e-07 Score=87.77 Aligned_cols=124 Identities=22% Similarity=0.226 Sum_probs=81.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|++.........+.+|+... ...++.++.... ..-.|+--.
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----------------~k~~~~~~~ 152 (225)
T 3d6j_A 91 FPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDW--FDIIIGGEDVTH----------------HKPDPEGLL 152 (225)
T ss_dssp CTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTC--CSEEECGGGCSS----------------CTTSTHHHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhh--eeeeeehhhcCC----------------CCCChHHHH
Confidence 68999999999999999999999999888888888887642 223333322110 001112222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceec-CC--CcchHHhhc-cchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE-EN--KCTEMAREC-SDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~-~~--~~~~~a~~a-ad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-....++++|| +.||++|++.|++++++ +. +..+..+.. ||+++.++..+.+.++
T Consensus 153 ~~~~~~~~~~~~~i~iGD-~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~ 218 (225)
T 3d6j_A 153 LAIDRLKACPEEVLYIGD-STVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPE 218 (225)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC----
T ss_pred HHHHHhCCChHHeEEEcC-CHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhh
Confidence 333333333456889999 99999999999998876 21 233444444 8998887777777665
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.28 E-value=7.4e-07 Score=90.43 Aligned_cols=126 Identities=15% Similarity=0.086 Sum_probs=87.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|++....+..+.+.+|+...- ...++.++... ...-.|+--.
T Consensus 105 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~----------------~~kp~~~~~~ 167 (267)
T 1swv_A 105 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP----------------AGRPYPWMCY 167 (267)
T ss_dssp CTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS----------------CCTTSSHHHH
T ss_pred CccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC-hHheecCCccC----------------CCCCCHHHHH
Confidence 789999999999999999999999988888888887765320 02223332211 0111333444
Q ss_pred HHHHHHHhCC-CEEEEEeCCCCCCHHHHhhCC---cceecCCCc-----------------------chHHhhc-cchhh
Q 044228 379 LLVQTAKEKG-HVVAFFGGSSTRDTPALKEAD---VGITEENKC-----------------------TEMAREC-SDIVI 430 (703)
Q Consensus 379 ~iv~~lq~~g-~~v~~iGD~G~ND~~al~~Ad---vGIa~~~~~-----------------------~~~a~~a-ad~vl 430 (703)
.+.+.+.-.. +.++++|| +.||+.|++.|+ +++++|... .+..++. ||+++
T Consensus 168 ~~~~~lgi~~~~~~i~iGD-~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~ 246 (267)
T 1swv_A 168 KNAMELGVYPMNHMIKVGD-TVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 246 (267)
T ss_dssp HHHHHHTCCSGGGEEEEES-SHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHhCCCCCcCEEEEeC-CHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceec
Confidence 4555555445 67999999 999999999999 677777321 2333333 89998
Q ss_pred cccccHHHHHhc
Q 044228 431 STVGSLLPILKL 442 (703)
Q Consensus 431 ~~~~~l~~~i~~ 442 (703)
.++..+..++..
T Consensus 247 ~~~~el~~~l~~ 258 (267)
T 1swv_A 247 ETMQELESVMEH 258 (267)
T ss_dssp SSGGGHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 888888887753
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.5e-06 Score=85.72 Aligned_cols=123 Identities=10% Similarity=0.041 Sum_probs=84.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE---LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~---~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.+++.+.++.|++.|+++.++|+.. ........+..|+... ...++.+.+.... .-.|+
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~~----------------kp~~~ 162 (235)
T 2om6_A 101 LEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF--IDKTFFADEVLSY----------------KPRKE 162 (235)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG--CSEEEEHHHHTCC----------------TTCHH
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH--hhhheeccccCCC----------------CCCHH
Confidence 7899999999999999999999999 8888888888988642 2233333322110 01122
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCcceec---CCCcchHHhhccchhhcccccHHHHHh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSST-RDTPALKEADVGITE---ENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~-ND~~al~~AdvGIa~---~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
--..+.+.+.-..+.++++|| +. ||+.|.+.|++++++ + +..+..+..+|+++.++..+..++.
T Consensus 163 ~~~~~~~~lgi~~~~~~~iGD-~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~~el~~~l~ 230 (235)
T 2om6_A 163 MFEKVLNSFEVKPEESLHIGD-TYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIPSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHTTCCGGGEEEEES-CTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEESSGGGHHHHHH
T ss_pred HHHHHHHHcCCCccceEEECC-ChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHhhHHHHHHHHH
Confidence 222233333223457999999 99 999999999999987 4 2333334457888778888877764
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.26 E-value=7.6e-07 Score=89.50 Aligned_cols=123 Identities=20% Similarity=0.186 Sum_probs=86.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++... ..-.|+--.
T Consensus 116 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~~----------------~Kp~~~~~~ 177 (243)
T 2hsz_A 116 YPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSLPE----------------IKPHPAPFY 177 (243)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTSSS----------------CTTSSHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe--EEEEEecccCCC----------------CCcCHHHHH
Confidence 78999999999999999999999999999999999998642 233343332211 011233344
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cCC--C-cchHHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EEN--K-CTEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~~--~-~~~~a~~aad~vl~~~~~l~~~i 440 (703)
.+.+.+.-..+.++++|| +.||++|.+.|++++. +.. + +.+..+..+|+++.++..+.+++
T Consensus 178 ~~~~~~~~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 178 YLCGKFGLYPKQILFVGD-SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred HHHHHhCcChhhEEEEcC-CHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHHh
Confidence 455555444567999999 9999999999998844 431 1 23445667899888777666543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.25 E-value=3.1e-06 Score=83.91 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=73.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE-EEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM-GSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~-~r~~P~~K 377 (703)
+|++.+.++.|++.|+++.++||.....+..+++.+|+..--..........+.. .+. ....+..|
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g-------------~~~~~~~~~~~K 160 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTG-------------RIEGTPSFREGK 160 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEE-------------EEESSCSSTHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEee-------------eecCCCCcchHH
Confidence 7999999999999999999999999999999999999863100001000000000 000 11234677
Q ss_pred HHHHHHHHh-CC------CEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 378 LLLVQTAKE-KG------HVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 378 ~~iv~~lq~-~g------~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
.+.++.+.+ .| +.++++|| +.||++|++.|++++++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~vGD-s~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 161 VVRVNQWLAGMGLALGDFAESYFYSD-SVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HHHHHHHHHHTTCCGGGSSEEEEEEC-CGGGHHHHHHSSEEEEES
T ss_pred HHHHHHHHHHcCCCcCchhheEEEeC-CHhhHHHHHhCCCeEEEC
Confidence 777655443 34 68999999 999999999999999986
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.23 E-value=9.2e-07 Score=88.18 Aligned_cols=122 Identities=13% Similarity=0.082 Sum_probs=86.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.++.... ..-.|+--.
T Consensus 112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~kp~~~~~~ 173 (240)
T 3sd7_A 112 YENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRY--FKYIAGSNLDGT----------------RVNKNEVIQ 173 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECTTSC----------------CCCHHHHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhh--EEEEEeccccCC----------------CCCCHHHHH
Confidence 89999999999999999999999999999999999998642 222332222110 001122222
Q ss_pred HHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCc---ceecCCCcchH--HhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEK-GHVVAFFGGSSTRDTPALKEADV---GITEENKCTEM--ARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~-g~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~~~~--a~~aad~vl~~~~~l~~~i 440 (703)
.+.+.+.-. .+.++++|| +.||+.|.+.|++ ++++|. +... .+..+|+++.++..+.++|
T Consensus 174 ~~~~~~g~~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~~g~-~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 174 YVLDLCNVKDKDKVIMVGD-RKYDIIGAKKIGIDSIGVLYGY-GSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp HHHHHHTCCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSS-CCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred HHHHHcCCCCCCcEEEECC-CHHHHHHHHHCCCCEEEEeCCC-CCHHHHhhcCCCEEECCHHHHHHHh
Confidence 334444434 567999999 9999999999999 777763 4333 2478999988888888765
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.22 E-value=9.3e-07 Score=85.68 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=87.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++... ..-.|+--.
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~kp~~~~~~ 152 (214)
T 3e58_A 91 FPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF--FDIVLSGEEFKE----------------SKPNPEIYL 152 (214)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGCSS----------------CTTSSHHHH
T ss_pred CchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh--eeeEeecccccC----------------CCCChHHHH
Confidence 78999999999999999999999999999999999998653 233444332211 111233334
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCc-chHHhhccchhhcccccHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKC-TEMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~-~~~a~~aad~vl~~~~~l~~~ 439 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++++.+...+ ....+..+|+++.++..+.++
T Consensus 153 ~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 153 TALKQLNVQASRALIIED-SEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HHHHHHTCCGGGEEEEEC-SHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred HHHHHcCCChHHeEEEec-cHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 455555444567999999 999999999999988764332 334446788888877766543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.3e-06 Score=86.98 Aligned_cols=62 Identities=15% Similarity=0.122 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHhC-C-----CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK-G-----HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~-g-----~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
..|...++.+.+. | ..++++|| +.||.+|++.|++|++|+ ++.+ . .++++.. +-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD-~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGD-SLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEES-SGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeC-CHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888887665 3 67999999 999999999999999999 6877 4 6778776 4455666554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.21 E-value=8.9e-07 Score=87.59 Aligned_cols=124 Identities=13% Similarity=0.014 Sum_probs=92.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++... ..-.|+--.
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~kp~~~~~~ 162 (233)
T 3umb_A 101 FPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGL--FDHVLSVDAVRL----------------YKTAPAAYA 162 (233)
T ss_dssp CTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTT--CSEEEEGGGTTC----------------CTTSHHHHT
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhh--cCEEEEecccCC----------------CCcCHHHHH
Confidence 78999999999999999999999999999999999998753 233444332211 111222333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceec----CCCcchHHhhccchhhcccccHHHHHhc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE----ENKCTEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~----~~~~~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++++++ + +..+..+..+|+++.++..+.+++..
T Consensus 163 ~~~~~~~~~~~~~~~vGD-~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~~~~el~~~l~~ 228 (233)
T 3umb_A 163 LAPRAFGVPAAQILFVSS-NGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGHDMRDLLQFVQA 228 (233)
T ss_dssp HHHHHHTSCGGGEEEEES-CHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEESSHHHHHHHHHC
T ss_pred HHHHHhCCCcccEEEEeC-CHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEECCHHHHHHHHHH
Confidence 444444444567999999 99999999999999997 4 45555566799999999999988874
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.21 E-value=9.3e-07 Score=85.08 Aligned_cols=118 Identities=12% Similarity=0.086 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
++++.+.++.|++.|+++.++|++...... ..+.+|+... ...++.+.+.. ...-.|+--.
T Consensus 87 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 147 (207)
T 2go7_A 87 MPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY--FTEILTSQSGF----------------VRKPSPEAAT 147 (207)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG--EEEEECGGGCC----------------CCTTSSHHHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh--eeeEEecCcCC----------------CCCCCcHHHH
Confidence 899999999999999999999999988887 8788887642 12222222110 0001133333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.++-..+.++++|| +.||++|++.|+++ ++|+ ++. . .||+++.++..+.++++
T Consensus 148 ~~~~~~~i~~~~~~~iGD-~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 148 YLLDKYQLNSDNTYYIGD-RTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQALADISRIFE 205 (207)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEESS-CCS-C---TTEEECSSTTHHHHHTS
T ss_pred HHHHHhCCCcccEEEECC-CHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeCCHHHHHHHHh
Confidence 445555444567999999 99999999999997 7787 455 2 68998888877776653
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.20 E-value=3.3e-06 Score=83.40 Aligned_cols=122 Identities=13% Similarity=0.144 Sum_probs=89.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++. +++.++|+.....+....+.+|+... ...++.+++.. ...-.|+--.
T Consensus 102 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 162 (234)
T 3u26_A 102 YPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDL--FDSITTSEEAG----------------FFKPHPRIFE 162 (234)
T ss_dssp CTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred CcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHH--cceeEeccccC----------------CCCcCHHHHH
Confidence 78999999999999 99999999999999999999998642 22333333221 0111222233
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCC---cceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSST-RDTPALKEAD---VGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~-ND~~al~~Ad---vGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +. ||+.|.+.|+ ++++++ ++.+..++.+|+++.++..+.+++.
T Consensus 163 ~~~~~~~~~~~~~~~vGD-~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~~~el~~~l~ 227 (234)
T 3u26_A 163 LALKKAGVKGEEAVYVGD-NPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSDLREVIKIVD 227 (234)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESSTHHHHHHHH
T ss_pred HHHHHcCCCchhEEEEcC-CcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCCHHHHHHHHH
Confidence 344444434567999999 97 9999999999 677777 5666666789999998888888775
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.2e-06 Score=88.20 Aligned_cols=134 Identities=8% Similarity=0.068 Sum_probs=85.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCCCCCCceeee-chh------h--hccC-------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL-GNFRPESNDIALE-GEQ------F--RELN------------- 355 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~-gi~~~~~~~~vi~-g~~------l--~~~~------------- 355 (703)
-+.+.++|++|+++| +++++||+....+..+.+++ ++.. .....+.+ |+. + ..++
T Consensus 25 ~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~-~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 102 (239)
T 1u02_A 25 DAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMIC-YHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSD 102 (239)
T ss_dssp CHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEE-GGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHHH
T ss_pred CHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEE-ECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHhh
Confidence 467899999999999 99999999999988887654 0000 01111111 111 0 0000
Q ss_pred ------------------------HH---HHHHhh---ccCce-----EEEeChh--hHHHHHHHHHhCCCEEEEEeCCC
Q 044228 356 ------------------------ST---ERMAKL---DSMTL-----MGSCLAA--DKLLLVQTAKEKGHVVAFFGGSS 398 (703)
Q Consensus 356 ------------------------~~---~~~~~~---~~~~v-----~~r~~P~--~K~~iv~~lq~~g~~v~~iGD~G 398 (703)
++ ++.+.+ ..+.+ +....|. .|...++.+.+.-. |+++|| +
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD-~ 180 (239)
T 1u02_A 103 FPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAGD-D 180 (239)
T ss_dssp STTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEES-S
T ss_pred CCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeC-C
Confidence 00 111111 11211 2233343 68888888877633 899999 9
Q ss_pred CCCHHHHhhC--CcceecCCCcchHHhhccchhhcc---cccHHHHHh
Q 044228 399 TRDTPALKEA--DVGITEENKCTEMARECSDIVIST---VGSLLPILK 441 (703)
Q Consensus 399 ~ND~~al~~A--dvGIa~~~~~~~~a~~aad~vl~~---~~~l~~~i~ 441 (703)
.||.+||+.| +.||||+ |+ ++.||+++.+ -.++.++|+
T Consensus 181 ~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 181 ATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp HHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred CccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 9999999999 9999999 56 5678888764 666666665
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.19 E-value=4.6e-06 Score=85.23 Aligned_cols=64 Identities=25% Similarity=0.333 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.+. ...++++|| +.||++|++.|++|++|+ ++.+..++.||+++. +-.++.++|+
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD-~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGD-NENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEEC-SHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcC-chhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 677777776653 256899999 999999999999999999 788888889999987 5677888776
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.18 E-value=6.5e-06 Score=84.54 Aligned_cols=40 Identities=23% Similarity=0.187 Sum_probs=36.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
-+.+.++|++|+++|++++++||+....+..+.+++|+..
T Consensus 28 ~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 28 WQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp CCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 3567899999999999999999999999999999999864
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.18 E-value=2.5e-06 Score=86.26 Aligned_cols=55 Identities=18% Similarity=0.073 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHhC-----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcc-hHHhhccchhhc
Q 044228 375 ADKLLLVQTAKEK-----GHVVAFFGGSSTRDTPALKEADVGITEENKCT-EMARECSDIVIS 431 (703)
Q Consensus 375 ~~K~~iv~~lq~~-----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~-~~a~~aad~vl~ 431 (703)
..|...++.+.+. ...|+++|| +.||.+|++.|++|++|| ++. +..++.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD-~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGD-SYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEEC-SGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECC-CcccHHHHHhCCcEEEeC-CCCccccchhceEEec
Confidence 3588777776543 357999999 999999999999999999 677 667788999876
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.18 E-value=4.6e-07 Score=97.62 Aligned_cols=105 Identities=16% Similarity=0.190 Sum_probs=73.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE-------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS------- 371 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r------- 371 (703)
+|++.+.|+.||++|++|+++||.....++.+|+++|+...-....|+ |..+....+ -.+-.+
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~d---------G~~tg~~~~~~p~ 292 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDE---------GKILPKFDKDFPI 292 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTT---------CCEEEEECTTSCC
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecC---------CceeeeecCccce
Confidence 999999999999999999999999999999999999874321112222 222211000 001111
Q ss_pred eChhhHHHHHHHHHhC--C-CEEEEEeCCCCCCHHHHhh-CCcceec
Q 044228 372 CLAADKLLLVQTAKEK--G-HVVAFFGGSSTRDTPALKE-ADVGITE 414 (703)
Q Consensus 372 ~~P~~K~~iv~~lq~~--g-~~v~~iGD~G~ND~~al~~-AdvGIa~ 414 (703)
+..+.|.+.++.+-+. | ..++++|| |.||.+||++ +|.++++
T Consensus 293 ~~~~gK~~~i~~~~~~~~~~~~i~a~GD-s~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 293 SIREGKVQTINKLIKNDRNYGPIMVGGD-SDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp CSTHHHHHHHHHHTCCTTEECCSEEEEC-SGGGHHHHHHCTTCSEEE
T ss_pred eCCCchHHHHHHHHHhcCCCCcEEEEEC-CHhHHHHHhcCccCceEE
Confidence 3457899999876433 2 35788899 9999999986 6766664
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.17 E-value=1e-06 Score=86.80 Aligned_cols=124 Identities=18% Similarity=0.155 Sum_probs=88.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++... ..-.|+--.
T Consensus 98 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~kp~~~~~~ 159 (230)
T 3um9_A 98 FADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNS--FDHLISVDEVRL----------------FKPHQKVYE 159 (230)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGG--CSEEEEGGGTTC----------------CTTCHHHHH
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhh--cceeEehhhccc----------------CCCChHHHH
Confidence 78999999999999999999999999999999999998642 223333332210 011222233
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCC---CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEEN---KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~---~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-....++++|| +.||+.|.+.|++++++-. +..+..+..+|+++.++..+.+++.
T Consensus 160 ~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 224 (230)
T 3um9_A 160 LAMDTLHLGESEILFVSC-NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFS 224 (230)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCC
T ss_pred HHHHHhCCCcccEEEEeC-CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHH
Confidence 344444434467999999 9999999999999998721 3444455678998888887776664
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.16 E-value=7.6e-06 Score=84.51 Aligned_cols=64 Identities=19% Similarity=0.181 Sum_probs=51.3
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
+|...++.+.+. .+.++++|| +.||++|++.|++|++|+ ++.+..++.||+++. +-.++.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD-~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGD-SLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEES-SGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcC-CHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 355555555443 246899999 999999999999999999 788989999999987 6667877775
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.16 E-value=2.5e-06 Score=87.32 Aligned_cols=65 Identities=15% Similarity=0.146 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
..|...++.+.+. .+.++++|| +.||.+|++.|++|++|+ ++.+..++.||+++. +-.++.++|+
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD-~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGD-SGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECC-cHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3677777776554 246899999 999999999999999999 788889999999987 5567877775
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.14 E-value=1.8e-06 Score=85.41 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=88.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++.. ...-.|+-..
T Consensus 85 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~Kp~~~~~~ 146 (222)
T 2nyv_A 85 YPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY--FDLIVGGDTFG----------------EKKPSPTPVL 146 (222)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTSSC----------------TTCCTTHHHH
T ss_pred CCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH--heEEEecCcCC----------------CCCCChHHHH
Confidence 89999999999999999999999999999999999998642 22333332210 1112344444
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCC-CcchHHhhccchhhcccccHHHHHhc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEEN-KCTEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~-~~~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
.+.+.+.-....++++|| +.||++|.+.|+++ |++.. .+.... ..+|+++.++..+.+++..
T Consensus 147 ~~~~~~~~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~~ 210 (222)
T 2nyv_A 147 KTLEILGEEPEKALIVGD-TDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMDN 210 (222)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHHT
T ss_pred HHHHHhCCCchhEEEECC-CHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHHH
Confidence 555555444567999999 99999999999987 55541 122222 5688888888888887764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=1.7e-06 Score=88.86 Aligned_cols=127 Identities=13% Similarity=0.014 Sum_probs=86.8
Q ss_pred cccHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGV--RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi--~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
.+++.+.++.|++.|+ ++.++|+.....+..+.+.+|+... ...++.++..... ...+.-.|+-
T Consensus 144 ~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~--fd~v~~~~~~~~~------------~~~~Kp~~~~ 209 (282)
T 3nuq_A 144 DIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADL--FDGLTYCDYSRTD------------TLVCKPHVKA 209 (282)
T ss_dssp CHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTS--CSEEECCCCSSCS------------SCCCTTSHHH
T ss_pred ChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccc--cceEEEeccCCCc------------ccCCCcCHHH
Confidence 7899999999999999 9999999999999999999998753 2233322211000 0011112222
Q ss_pred HHHHHHHHHhCC-CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHH------hhccchhhcccccHHHHHh
Q 044228 377 KLLLVQTAKEKG-HVVAFFGGSSTRDTPALKEADVGITEENKCTEMA------RECSDIVISTVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~g-~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a------~~aad~vl~~~~~l~~~i~ 441 (703)
=..+.+.+.-.. +.++++|| +.||+.|.++|++|.+|+ ++.... ...||+++.++..+.+++.
T Consensus 210 ~~~~~~~lgi~~~~~~i~vGD-~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~ 279 (282)
T 3nuq_A 210 FEKAMKESGLARYENAYFIDD-SGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVISDILELPHVVS 279 (282)
T ss_dssp HHHHHHHHTCCCGGGEEEEES-CHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEESSGGGGGGTSG
T ss_pred HHHHHHHcCCCCcccEEEEcC-CHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEeCCHHHHHHHhh
Confidence 223333443344 67999999 999999999999998876 333322 2367888888888777664
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=98.12 E-value=9.9e-06 Score=76.50 Aligned_cols=134 Identities=12% Similarity=0.019 Sum_probs=81.1
Q ss_pred cccCceEEEEEEECCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhC-CCccccccceEEEecC
Q 044228 123 LLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSR-SLNVDQNLSIVQYRKL 201 (703)
Q Consensus 123 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~-~~~~~~~~~~l~~~~F 201 (703)
||+|+|.|.++......-. ....+++.+.... |..|.||+++||++++++. +.... ...-.|
T Consensus 1 LT~G~p~V~~v~~~~~~~~-----~~~~~lL~laasl-------E~~SeHPlA~AIv~~a~~~~~~~~~-----~~~~~f 63 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVAT-----LPLRKVLAVVGTA-------EASSEHPLGVAVTKYCKEELGTETL-----GYCTDF 63 (165)
T ss_dssp CCCCCCCEEEEEECCCTTT-----SCHHHHHHHHHHH-------HTTSCSTTHHHHHHHHHHHHTCCCC-----CCEEEE
T ss_pred CCCceeEEEEEEeeCCcCC-----CCHHHHHHHHHHH-------HccCCChHHHHHHHHHHHhcCCCCC-----CCcCce
Confidence 8999999999876432100 0112566666666 7889999999999999754 32100 112233
Q ss_pred CCCCCeEEEEEEeCCCCc----------------------------ceeEEEEEeCChHHHHhhcccccccCCceecchH
Q 044228 202 SSHNKVCGVLMKINGGDE----------------------------DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKG 253 (703)
Q Consensus 202 ~s~~k~msviv~~~~~~~----------------------------~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~ 253 (703)
.... +.|+.++..+... ...-+-+.-|+++++-+.....
T Consensus 64 ~~i~-G~Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~------------ 130 (165)
T 2arf_A 64 QAVP-GCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTI------------ 130 (165)
T ss_dssp EEET-TTEEEEEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSS------------
T ss_pred EEec-CccEEEEEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCC------------
Confidence 3333 4466666533100 0001122349999885422110
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee
Q 044228 254 EKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL 298 (703)
Q Consensus 254 ~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~ 298 (703)
.+.+.+.+.++..+|..++++|.++ .++|++++
T Consensus 131 -~~~~~~~~~~~~~~G~T~v~va~dg-----------~~~g~i~l 163 (165)
T 2arf_A 131 -SSDVSDAMTDHEMKGQTAILVAIDG-----------VLCGMIAI 163 (165)
T ss_dssp -CHHHHHHHHHHHTTTSEEEEEEETT-----------EEEEEEEE
T ss_pred -CHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEEE
Confidence 1234455667788999999999988 89999886
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.11 E-value=6.3e-06 Score=85.90 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=51.9
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc---ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS---TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~---~~~~l~~~i~ 441 (703)
.|...++.+.+. | ..++++|| +.||.+|++.|++|++|+ ++.+..++.||+++. +-.++.++|+
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD-~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGD-AENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 577766666543 2 46899999 999999999999999999 788888889999885 4556777775
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=5.4e-06 Score=83.54 Aligned_cols=64 Identities=13% Similarity=0.122 Sum_probs=51.9
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhc-------cchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC-------SDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~a-------ad~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.+. | ..++++|| +.||.+|++.|++|++|+ ++.+..++. ||+++. +-.++.++|+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD-~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGD-SGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECC-chhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 577777766653 2 46899999 999999999999999999 788888875 788887 5567777775
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.09 E-value=3.7e-06 Score=83.15 Aligned_cols=115 Identities=14% Similarity=0.056 Sum_probs=75.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+... +..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 94 ~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~Kp~~~~~~ 153 (233)
T 3nas_A 94 LPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDD--FHAIVDPTTLA----------------KGKPDPDIFL 153 (233)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTT--CSEECCC-------------------------CCHHH
T ss_pred CcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhh--cCEEeeHhhCC----------------CCCCChHHHH
Confidence 78999999999999999999999754 6778888998653 22333332210 1111222224
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l 436 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++++++. ++.+..+ .||+++.++..+
T Consensus 154 ~~~~~lgi~~~~~i~vGD-s~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el 208 (233)
T 3nas_A 154 TAAAMLDVSPADCAAIED-AEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDL 208 (233)
T ss_dssp HHHHHHTSCGGGEEEEEC-SHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGC
T ss_pred HHHHHcCCCHHHEEEEeC-CHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhC
Confidence 455555444567999999 999999999999999988 4555555 889998855444
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=3.3e-06 Score=83.39 Aligned_cols=120 Identities=10% Similarity=0.019 Sum_probs=81.8
Q ss_pred cccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNA-GVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~a-gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.+++.+.++.|++. |+++.++|+.....+....+.+|+... ...++.+.+.. ..|.-+
T Consensus 95 ~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~-------------------~~~k~~ 153 (234)
T 2hcf_A 95 LEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY--FPFGAFADDAL-------------------DRNELP 153 (234)
T ss_dssp CTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT--CSCEECTTTCS-------------------SGGGHH
T ss_pred CCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhh--cCcceecCCCc-------------------CccchH
Confidence 79999999999999 999999999999999999999998753 12223332210 011112
Q ss_pred HHH----HHHHH--hCCCEEEEEeCCCCCCHHHHhhCC---cceecCCCcchHHhh--ccchhhcccccHHHHHh
Q 044228 378 LLL----VQTAK--EKGHVVAFFGGSSTRDTPALKEAD---VGITEENKCTEMARE--CSDIVISTVGSLLPILK 441 (703)
Q Consensus 378 ~~i----v~~lq--~~g~~v~~iGD~G~ND~~al~~Ad---vGIa~~~~~~~~a~~--aad~vl~~~~~l~~~i~ 441 (703)
..+ .+.+. -..+.++++|| +.||+.|.+.|+ ++++.+ .+...... .+|+++.++..+.+++.
T Consensus 154 ~~~~~~~~~~lg~~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~~~~el~~~l~ 226 (234)
T 2hcf_A 154 HIALERARRMTGANYSPSQIVIIGD-TEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFKNFAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEES-SHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEESCSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccEEEECC-CHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeCCHHhHHHHHH
Confidence 222 23332 22357899999 999999999999 555555 23333222 38998887777777665
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.08 E-value=3.3e-06 Score=83.50 Aligned_cols=120 Identities=11% Similarity=0.017 Sum_probs=83.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 105 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~Kp~~~~~~ 166 (231)
T 3kzx_A 105 NDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHY--FDSIIGSGDTG----------------TIKPSPEPVL 166 (231)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEETSSS----------------CCTTSSHHHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhh--eeeEEcccccC----------------CCCCChHHHH
Confidence 89999999999999999999999999999999999998642 22233322211 0011223334
Q ss_pred HHHHHHHhCCC-EEEEEeCCCCCCHHHHhhCCc-ceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGH-VVAFFGGSSTRDTPALKEADV-GITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~-~v~~iGD~G~ND~~al~~Adv-GIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-... .++++|| +.||+.|.++|++ +|.++ ++.+ ..+|+++.++..+.+++.
T Consensus 167 ~~~~~lgi~~~~~~v~vGD-~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~~~~el~~~l~ 226 (231)
T 3kzx_A 167 AALTNINIEPSKEVFFIGD-SISDIQSAIEAGCLPIKYG-STNI---IKDILSFKNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHTCCCSTTEEEEES-SHHHHHHHHHTTCEEEEEC-C--------CCEEESSHHHHHHHHH
T ss_pred HHHHHcCCCcccCEEEEcC-CHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeCCHHHHHHHHH
Confidence 44455544455 7999999 9999999999997 66676 4443 356777778888777664
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.3e-06 Score=85.37 Aligned_cols=114 Identities=10% Similarity=-0.034 Sum_probs=78.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 152 (221)
T 2wf7_A 93 YPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY--FDAIADPAEVA----------------ASKPAPDIFI 152 (221)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG--CSEECCTTTSS----------------SCTTSSHHHH
T ss_pred CCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH--cceEeccccCC----------------CCCCChHHHH
Confidence 789999999999999999999998 445667777887542 22233332211 0011122223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhccccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGS 435 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~ 435 (703)
.+.+.+.-..+.++++|| +.||++|++.|+++++|. ++.+..+ .||+++.++..
T Consensus 153 ~~~~~lgi~~~~~i~iGD-~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~e 206 (221)
T 2wf7_A 153 AAAHAVGVAPSESIGLED-SQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSH 206 (221)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGG
T ss_pred HHHHHcCCChhHeEEEeC-CHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHh
Confidence 344444333457999999 999999999999999998 5666666 89998874433
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.05 E-value=4.9e-06 Score=84.43 Aligned_cols=125 Identities=10% Similarity=0.001 Sum_probs=87.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.++.... ..-.|+--.
T Consensus 113 ~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~----------------~kp~~~~~~ 175 (277)
T 3iru_A 113 IPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT-PASTVFATDVVR----------------GRPFPDMAL 175 (277)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-CSEEECGGGSSS----------------CTTSSHHHH
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-CceEecHHhcCC----------------CCCCHHHHH
Confidence 789999999999999999999999999988888888875420 123333332110 011222233
Q ss_pred HHHHHHHhCC-CEEEEEeCCCCCCHHHHhhCC---cceecCCC-----------------------cchHHh-hccchhh
Q 044228 379 LLVQTAKEKG-HVVAFFGGSSTRDTPALKEAD---VGITEENK-----------------------CTEMAR-ECSDIVI 430 (703)
Q Consensus 379 ~iv~~lq~~g-~~v~~iGD~G~ND~~al~~Ad---vGIa~~~~-----------------------~~~~a~-~aad~vl 430 (703)
.+.+.+.-.. +.+++||| +.||+.|.+.|+ ++|++|.+ ..+..+ ..+|+++
T Consensus 176 ~~~~~lgi~~~~~~i~vGD-~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~ 254 (277)
T 3iru_A 176 KVALELEVGHVNGCIKVDD-TLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVI 254 (277)
T ss_dssp HHHHHHTCSCGGGEEEEES-SHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHcCCCCCccEEEEcC-CHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEe
Confidence 4445554455 78999999 999999999999 56666632 122333 3489999
Q ss_pred cccccHHHHHh
Q 044228 431 STVGSLLPILK 441 (703)
Q Consensus 431 ~~~~~l~~~i~ 441 (703)
.++..+.+++.
T Consensus 255 ~~~~el~~~l~ 265 (277)
T 3iru_A 255 DSVADLETVIT 265 (277)
T ss_dssp SSGGGTHHHHH
T ss_pred cCHHHHHHHHH
Confidence 98888888876
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.7e-06 Score=87.83 Aligned_cols=127 Identities=17% Similarity=0.175 Sum_probs=83.1
Q ss_pred cccHHHHHHHHHHC-CCEEEEEcCC---------------------CHHHHHHHHHHcCCCCCCCCceeeechhhhccCH
Q 044228 299 REEIKSTVEALRNA-GVRIILVSED---------------------ELLAVTEVACELGNFRPESNDIALEGEQFRELNS 356 (703)
Q Consensus 299 r~~~~~~I~~l~~a-gi~v~m~TGD---------------------~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~ 356 (703)
++++.+.++.+++. |+++.+.|.. ....+..+.++.|+... +...+.....
T Consensus 124 ~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-----~~~~~~~~~~-- 196 (289)
T 3gyg_A 124 KEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN-----INRCNPLAGD-- 196 (289)
T ss_dssp HHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE-----EEECCGGGTC--
T ss_pred HHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE-----EEEccccccC--
Confidence 78899999999988 9999888876 22333344444444310 0000000000
Q ss_pred HHHHHhhccCceEEEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhh
Q 044228 357 TERMAKLDSMTLMGSCLA--ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI 430 (703)
Q Consensus 357 ~~~~~~~~~~~v~~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl 430 (703)
..-..+....| ..|...++.+.+. .+.++++|| +.||.+|++.|++|++|+ ++.+..++.||+++
T Consensus 197 -------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GD-s~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~ 267 (289)
T 3gyg_A 197 -------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGD-SGNDVRMLQTVGNGYLLK-NATQEAKNLHNLIT 267 (289)
T ss_dssp -------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBC
T ss_pred -------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcC-CHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEc
Confidence 00002333333 4577777666553 346899999 999999999999999999 68999999999998
Q ss_pred c--ccccHHHHHh
Q 044228 431 S--TVGSLLPILK 441 (703)
Q Consensus 431 ~--~~~~l~~~i~ 441 (703)
. +-.++.++++
T Consensus 268 ~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 268 DSEYSKGITNTLK 280 (289)
T ss_dssp SSCHHHHHHHHHH
T ss_pred CCCCcCHHHHHHH
Confidence 8 5556777665
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.03 E-value=9.3e-06 Score=82.49 Aligned_cols=179 Identities=15% Similarity=0.159 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeecCc----ccccc----cCcEEEE----EE----------ee-cccHHHHHHHHHHC
Q 044228 256 RRFQKLIKDMEDSGLRPIAFACGQTEV----SEIKE----NGLHLLA----LA----------GL-REEIKSTVEALRNA 312 (703)
Q Consensus 256 ~~~~~~~~~~~~~G~r~l~~A~~~l~~----~~~~e----~~l~~lG----~~----------~~-r~~~~~~I~~l~~a 312 (703)
+...+.++++.++|.++....=|. .. .+... -+ .+++ .+ .+ ++++.+.++.+++.
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~-~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 100 (261)
T 2rbk_A 23 SSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLID-GYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKK 100 (261)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCC-EEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccC-eEEEeCCEEEEECCEEEEecCCCHHHHHHHHHHHHHc
Confidence 556677888888998765544444 31 01111 11 1221 01 11 78889999999999
Q ss_pred CCEEEEEcCCCH------HHHH-HHHHHcCC-CCC----------CCCceeeechhhhccCHHHHHHhhccCceE-----
Q 044228 313 GVRIILVSEDEL------LAVT-EVACELGN-FRP----------ESNDIALEGEQFRELNSTERMAKLDSMTLM----- 369 (703)
Q Consensus 313 gi~v~m~TGD~~------~ta~-~ia~~~gi-~~~----------~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~----- 369 (703)
|+.+.+.|+|.. .... ..-+.+++ ... +.....+.+++-. ..++.+.+.++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~~~~~s~~~ 177 (261)
T 2rbk_A 101 GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEE---EKEVLPSIPTCEIGRWYPA 177 (261)
T ss_dssp TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHH---HHHHGGGSTTCEEECSSTT
T ss_pred CCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHH---HHHHHHhcCCeEEEEecCC
Confidence 999888887764 1111 11112232 100 0011112111100 01122222222211
Q ss_pred -EEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccc--cHHHHH
Q 044228 370 -GSCLA--ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVG--SLLPIL 440 (703)
Q Consensus 370 -~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~--~l~~~i 440 (703)
....| ..|...++.+.+. .+.++++|| +.||++|++.|++|++|+ ++.+..++.||+++.+.. ++.+++
T Consensus 178 ~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD-~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l 255 (261)
T 2rbk_A 178 FADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGD-GGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAM 255 (261)
T ss_dssp CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHH
T ss_pred eEEecCCCCChHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHH
Confidence 12222 4677777766543 356899999 999999999999999998 788888889999988444 488777
Q ss_pred h
Q 044228 441 K 441 (703)
Q Consensus 441 ~ 441 (703)
+
T Consensus 256 ~ 256 (261)
T 2rbk_A 256 K 256 (261)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=5.3e-06 Score=82.65 Aligned_cols=123 Identities=13% Similarity=0.104 Sum_probs=85.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 107 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 168 (240)
T 2no4_A 107 YPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV--LDSCLSADDLK----------------IYKPDPRIYQ 168 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGTT----------------CCTTSHHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH--cCEEEEccccC----------------CCCCCHHHHH
Confidence 79999999999999999999999999999999999998642 22334333221 0111233333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc---eecCCCcchHHhhcc-chhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG---ITEENKCTEMARECS-DIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG---Ia~~~~~~~~a~~aa-d~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++. +..+. ..+..+..+ |+++.++..+..++.
T Consensus 169 ~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~v~~~~-~~~~~~~~~~~~~~~~~~el~~~l~ 233 (240)
T 2no4_A 169 FACDRLGVNPNEVCFVSS-NAWDLGGAGKFGFNTVRINRQG-NPPEYEFAPLKHQVNSLSELWPLLA 233 (240)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHHHHHHHTCEEEEECTTC-CCCCCTTSCCSEEESSGGGHHHHHC
T ss_pred HHHHHcCCCcccEEEEeC-CHHHHHHHHHCCCEEEEECCCC-CCCcccCCCCceeeCCHHHHHHHHH
Confidence 444444434557899999 99999999999955 44442 233333456 888888888887764
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.01 E-value=3.5e-06 Score=83.34 Aligned_cols=124 Identities=12% Similarity=0.122 Sum_probs=85.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 97 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 158 (232)
T 1zrn_A 97 FSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG--FDHLLSVDPVQ----------------VYKPDNRVYE 158 (232)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEESGGGT----------------CCTTSHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhh--hheEEEecccC----------------CCCCCHHHHH
Confidence 79999999999999999999999999999999999998642 22333333221 1112233333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCC---CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEEN---KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~---~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++++++-. +..+..+..+|+++.++..+..++.
T Consensus 159 ~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 223 (232)
T 1zrn_A 159 LAEQALGLDRSAILFVAS-NAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFE 223 (232)
T ss_dssp HHHHHHTSCGGGEEEEES-CHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC-
T ss_pred HHHHHcCCCcccEEEEeC-CHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHH
Confidence 444444434457899999 9999999999999988621 2223334567888777776665554
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.00 E-value=4.7e-06 Score=79.33 Aligned_cols=119 Identities=12% Similarity=0.025 Sum_probs=79.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcC--CCCCCCCceeee-----chhhhccCH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELG--NFRPESNDIALE-----GEQFRELNS 356 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~g--i~~~~~~~~vi~-----g~~l~~~~~ 356 (703)
.|++.++++.|+++|+++.++|+... ..+..+.+++| +.. ++. +++.
T Consensus 29 ~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~------~~~~~~~~~~~~----- 97 (179)
T 3l8h_A 29 LPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA------IFMCPHGPDDGC----- 97 (179)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE------EEEECCCTTSCC-----
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE------EEEcCCCCCCCC-----
Confidence 78999999999999999999999885 55666777777 332 110 0000
Q ss_pred HHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---ceecCCCcchHHh----hccchh
Q 044228 357 TERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEMAR----ECSDIV 429 (703)
Q Consensus 357 ~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~~~~a~----~aad~v 429 (703)
-...-.|+-=..+.+.+.-..+.++++|| +.||+.|.++|++ +++.| .+..... ..+|++
T Consensus 98 -----------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v 164 (179)
T 3l8h_A 98 -----------ACRKPLPGMYRDIARRYDVDLAGVPAVGD-SLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRV 164 (179)
T ss_dssp -----------SSSTTSSHHHHHHHHHHTCCCTTCEEEES-SHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEE
T ss_pred -----------CCCCCCHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEE
Confidence 00001122223344444444567999999 9999999999995 66666 3444433 457999
Q ss_pred hcccccHHHHHh
Q 044228 430 ISTVGSLLPILK 441 (703)
Q Consensus 430 l~~~~~l~~~i~ 441 (703)
+.++..+.+.+.
T Consensus 165 ~~~l~el~~~l~ 176 (179)
T 3l8h_A 165 CEDLAAVAEQLL 176 (179)
T ss_dssp ESSHHHHHHHHH
T ss_pred ecCHHHHHHHHH
Confidence 888888888775
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.2e-05 Score=78.18 Aligned_cols=124 Identities=14% Similarity=0.046 Sum_probs=84.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++... ..-.|+-=.
T Consensus 96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~Kp~~~~~~ 157 (241)
T 2hoq_A 96 VPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDF--FEHVIISDFEGV----------------KKPHPKIFK 157 (241)
T ss_dssp CTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGG--CSEEEEGGGGTC----------------CTTCHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhh--ccEEEEeCCCCC----------------CCCCHHHHH
Confidence 78999999999999999999999999888899999998642 233333332210 011122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCccee-cC-CCcchHHhh---ccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSST-RDTPALKEADVGIT-EE-NKCTEMARE---CSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~-ND~~al~~AdvGIa-~~-~~~~~~a~~---aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +. ||+.|.+.|+++.+ +. +.+...... .+|+++.++..+..++.
T Consensus 158 ~~~~~~g~~~~~~i~iGD-~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l~ 225 (241)
T 2hoq_A 158 KALKAFNVKPEEALMVGD-RLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVLA 225 (241)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHHH
T ss_pred HHHHHcCCCcccEEEECC-CchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHHH
Confidence 333444334457999999 98 99999999999755 32 123333332 68888888888887775
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.97 E-value=3.9e-06 Score=83.88 Aligned_cols=135 Identities=13% Similarity=0.071 Sum_probs=90.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHH--hhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMA--KLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~--~~~~~~v~~r~~P~~ 376 (703)
.|++.+.++.|+++|+++.++|+.....+..+.+ |+... ..++.++....-. .+.. .-++-..+-+....+
T Consensus 79 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~---~~v~~~~~~~~~~--~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 79 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK---DRIYCNHASFDND--YIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG---GGEEEEEEECSSS--BCEEECTTCCCTTCCSCCSSC
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC---CeEEeeeeEEcCC--ceEEecCCCCccccccccCCc
Confidence 8999999999999999999999999988888887 76442 2333332211000 0000 000000011112457
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhc--cchhhcccccHHHHHhc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC--SDIVISTVGSLLPILKL 442 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~a--ad~vl~~~~~l~~~i~~ 442 (703)
|..+++.+....+.++++|| +.||+.+.+.|++.++.. ...+..... +|+++.++..+.+++..
T Consensus 152 K~~~~~~~~~~~~~~~~vGD-s~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~el~~~l~~ 217 (236)
T 2fea_A 152 KPSVIHELSEPNQYIIMIGD-SVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQDFYEIRKEIEN 217 (236)
T ss_dssp HHHHHHHHCCTTCEEEEEEC-CGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCSSHHHHHHHHHT
T ss_pred HHHHHHHHhccCCeEEEEeC-ChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecCCHHHHHHHHHH
Confidence 88888888777789999999 999999999999988743 122223332 78877788888877754
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.93 E-value=6.8e-06 Score=81.84 Aligned_cols=124 Identities=7% Similarity=0.036 Sum_probs=81.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+....+. |+...-....++.+++.. ...-.|+--.
T Consensus 110 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~----------------~~kp~~~~~~ 172 (247)
T 3dv9_A 110 MPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK----------------YGKPNPEPYL 172 (247)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS----------------SCTTSSHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC----------------CCCCCCHHHH
Confidence 78999999999999999999999988877777777 876531003344443321 1111233333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcch----HHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTE----MARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~----~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|+++ +++. .+.. ..+..||+++.++..+.+++.
T Consensus 173 ~~~~~lg~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~~~~el~~~l~ 238 (247)
T 3dv9_A 173 MALKKGGFKPNEALVIEN-APLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFHSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHTCCGGGEEEEEC-SHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEESSHHHHHHHHH
T ss_pred HHHHHcCCChhheEEEeC-CHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 444544444567999999 99999999999975 3343 2221 122378999888888777765
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.93 E-value=1e-05 Score=79.93 Aligned_cols=123 Identities=11% Similarity=-0.008 Sum_probs=85.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|+ .|+++.++|+.....+....+.+|+... ...++.+++... ..-.|+--.
T Consensus 109 ~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~kp~~~~~~ 169 (240)
T 3qnm_A 109 MPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY--FKKIILSEDLGV----------------LKPRPEIFH 169 (240)
T ss_dssp STTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGTTC----------------CTTSHHHHH
T ss_pred CccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh--ceeEEEeccCCC----------------CCCCHHHHH
Confidence 789999999999 9999999999999988989899998653 233333332211 011122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCcceecCCCcch-HHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSST-RDTPALKEADVGITEENKCTE-MARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~-ND~~al~~AdvGIa~~~~~~~-~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +. ||+.|.+.|++++++...+.. ..+..+|+++.++..+..+..
T Consensus 170 ~~~~~lgi~~~~~~~iGD-~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~~ 233 (240)
T 3qnm_A 170 FALSATQSELRESLMIGD-SWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLLE 233 (240)
T ss_dssp HHHHHTTCCGGGEEEEES-CTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHTC
T ss_pred HHHHHcCCCcccEEEECC-CchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHHh
Confidence 233333223467999999 95 999999999999997743331 455678999888877776554
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.89 E-value=1.8e-05 Score=78.18 Aligned_cols=124 Identities=10% Similarity=0.008 Sum_probs=85.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++. +++.++|+.....+....+.+|+... ...++.+++... ..-.|+--.
T Consensus 105 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~kp~~~~~~ 165 (238)
T 3ed5_A 105 IDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPF--FKDIFVSEDTGF----------------QKPMKEYFN 165 (238)
T ss_dssp CTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGG--CSEEEEGGGTTS----------------CTTCHHHHH
T ss_pred CccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhh--hheEEEecccCC----------------CCCChHHHH
Confidence 78999999999999 99999999999998899899998753 223333332210 001111112
Q ss_pred HHHHHHH-hCCCEEEEEeCCCC-CCHHHHhhCCcce-ecCC-CcchHHhhccchhhcccccHHHHHhc
Q 044228 379 LLVQTAK-EKGHVVAFFGGSST-RDTPALKEADVGI-TEEN-KCTEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~~lq-~~g~~v~~iGD~G~-ND~~al~~AdvGI-a~~~-~~~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
.+.+.+. -..+.++++|| +. ||+.|.+.|+++. .++. +..+..+..+|+++.++..+.+++..
T Consensus 166 ~~~~~~g~~~~~~~i~vGD-~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~ 232 (238)
T 3ed5_A 166 YVFERIPQFSAEHTLIIGD-SLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNI 232 (238)
T ss_dssp HHHHTSTTCCGGGEEEEES-CTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTC
T ss_pred HHHHHcCCCChhHeEEECC-CcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHh
Confidence 2222222 22357999999 98 9999999999953 3431 22455666789999999999988874
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.89 E-value=6.2e-06 Score=82.35 Aligned_cols=124 Identities=10% Similarity=0.056 Sum_probs=82.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+.....+....+. |+...-....++.+++... ..-.|+--.
T Consensus 111 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~----------------~kp~~~~~~ 173 (243)
T 3qxg_A 111 MPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY----------------GKPNPEPYL 173 (243)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS----------------CTTSSHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC----------------CCCChHHHH
Confidence 78999999999999999999999887777777666 7765310133444433211 111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchH----HhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEM----ARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~----a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|+++ +.+. .+... .+..+|+++.++..+.+++.
T Consensus 174 ~~~~~lg~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~s~~el~~~l~ 239 (243)
T 3qxg_A 174 MALKKGGLKADEAVVIEN-APLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFPSMQTLCDSWD 239 (243)
T ss_dssp HHHHHTTCCGGGEEEEEC-SHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEESCHHHHHHHHH
T ss_pred HHHHHcCCCHHHeEEEeC-CHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 333333333467999999 99999999999995 4454 33322 23368999888888877665
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.5e-05 Score=78.26 Aligned_cols=114 Identities=12% Similarity=0.037 Sum_probs=80.2
Q ss_pred cccHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAG-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~ag-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.+++.+.++.|++.| +++.++|+........+.+.+|+... ... +++...| |
T Consensus 107 ~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~--f~~-----------------------~~~~~kp--k 159 (234)
T 3ddh_A 107 LPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPY--FDH-----------------------IEVMSDK--T 159 (234)
T ss_dssp CTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGG--CSE-----------------------EEEESCC--S
T ss_pred CccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhh--hhe-----------------------eeecCCC--C
Confidence 789999999999999 99999999998888888899988642 111 2333333 4
Q ss_pred HHHHHHHHh----CCCEEEEEeCCCC-CCHHHHhhCCcceecC------CCcchHHhhc-cchhhcccccHHHHH
Q 044228 378 LLLVQTAKE----KGHVVAFFGGSST-RDTPALKEADVGITEE------NKCTEMAREC-SDIVISTVGSLLPIL 440 (703)
Q Consensus 378 ~~iv~~lq~----~g~~v~~iGD~G~-ND~~al~~AdvGIa~~------~~~~~~a~~a-ad~vl~~~~~l~~~i 440 (703)
.+.++.+.+ ..+.++++|| +. ||+.|.+.|+++.++- +++....+.. +|+++.++..+.+++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD-~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGN-SFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEES-CCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHHC
T ss_pred HHHHHHHHHHhCCCcceEEEECC-CcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHhc
Confidence 444443332 3467999999 96 9999999999988752 0222222333 488888888887664
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.88 E-value=2.8e-06 Score=85.32 Aligned_cols=119 Identities=13% Similarity=0.106 Sum_probs=78.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCCCCCCceeeech--hhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVA-CELGNFRPESNDIALEGE--QFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia-~~~gi~~~~~~~~vi~g~--~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.+++.+.++.|++.|+++.++|+.........- +..|+... ...++.++ ... ...|
T Consensus 114 ~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~--f~~~~~~~~~~~~------------------~~Kp- 172 (250)
T 3l5k_A 114 MPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL--FSHIVLGDDPEVQ------------------HGKP- 172 (250)
T ss_dssp CTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT--SSCEECTTCTTCC------------------SCTT-
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh--eeeEEecchhhcc------------------CCCC-
Confidence 789999999999999999999999876554432 22343321 12222222 110 1111
Q ss_pred hHHHHHH-HHHhCC-----CEEEEEeCCCCCCHHHHhhCC---cceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 376 DKLLLVQ-TAKEKG-----HVVAFFGGSSTRDTPALKEAD---VGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~-~lq~~g-----~~v~~iGD~G~ND~~al~~Ad---vGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
|.++++ .+++.| +.++++|| +.||+.|.+.|+ +++++| ++.+..+..||+++.++..+...+.
T Consensus 173 -~~~~~~~~~~~lgi~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~sl~el~~~l~ 244 (250)
T 3l5k_A 173 -DPDIFLACAKRFSPPPAMEKCLVFED-APNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNSLQDFQPELF 244 (250)
T ss_dssp -STHHHHHHHHTSSSCCCGGGEEEEES-SHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSCGGGCCGGGG
T ss_pred -ChHHHHHHHHHcCCCCCcceEEEEeC-CHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecCHHHhhHHHh
Confidence 112222 233333 67999999 999999999999 566667 4566677889999987777765543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.88 E-value=4.9e-06 Score=83.97 Aligned_cols=125 Identities=16% Similarity=-0.023 Sum_probs=86.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCce-eeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-ALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~-vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.+++.+.++.|++.|+++.++|+.....+..+.+..|+... ... ++.+++.. ....-.|+--
T Consensus 112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~i~~~~~~~---------------~~~Kp~~~~~ 174 (259)
T 4eek_A 112 IEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL--AGEHIYDPSWVG---------------GRGKPHPDLY 174 (259)
T ss_dssp CTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH--HCSCEECGGGGT---------------TCCTTSSHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh--ccceEEeHhhcC---------------cCCCCChHHH
Confidence 78999999999999999999999999999999999988631 111 23332211 0111112222
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCc-------c-hHHhhccchhhcccccHHHHHhc
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKC-------T-EMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~-------~-~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
..+.+.+.-..+.++++|| +.||+.|.+.|+++ +.+. .+ . +.....+|+++.++..+.+++..
T Consensus 175 ~~~~~~lgi~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~ 246 (259)
T 4eek_A 175 TFAAQQLGILPERCVVIED-SVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLTSHAELRAALAE 246 (259)
T ss_dssp HHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEEcC-CHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhCCHHHHHHHHHh
Confidence 3333333333467999999 99999999999998 4454 22 2 23334589999999999888874
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.83 E-value=3.4e-06 Score=82.05 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=80.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC--hhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL--AAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~--P~~ 376 (703)
.+++.+.++.|++. +++.++|+.....+..+.+.+|+... ...++.+.+. .... |+-
T Consensus 85 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~KP~~~~ 143 (209)
T 2hdo_A 85 YPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDT------------------PKRKPDPLP 143 (209)
T ss_dssp CTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGS------------------SCCTTSSHH
T ss_pred CCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh--ccEEEecCcC------------------CCCCCCcHH
Confidence 78999999999999 99999999999988888888887542 1222222211 0111 222
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCC--C-cchHHhhccchhhcccccHHHH
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEEN--K-CTEMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~--~-~~~~a~~aad~vl~~~~~l~~~ 439 (703)
-..+.+.+.-....++++|| +.||+.|.+.|++++++.. . ..+..++ +|+++.++..+.++
T Consensus 144 ~~~~~~~~~~~~~~~i~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 144 LLTALEKVNVAPQNALFIGD-SVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp HHHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred HHHHHHHcCCCcccEEEECC-ChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 23344444333467999999 9999999999999988631 1 2333444 88888777666554
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.82 E-value=2e-05 Score=78.60 Aligned_cols=122 Identities=16% Similarity=0.116 Sum_probs=81.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. . ...++.+++.. ...-.|+-=.
T Consensus 112 ~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~--f~~~~~~~~~~----------------~~Kp~p~~~~ 172 (240)
T 2hi0_A 112 FPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S--FDFALGEKSGI----------------RRKPAPDMTS 172 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T--CSEEEEECTTS----------------CCTTSSHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c--eeEEEecCCCC----------------CCCCCHHHHH
Confidence 689999999999999999999999988888888888875 2 23344333211 0001122112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc---eecCCCcc-hHH-hhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG---ITEENKCT-EMA-RECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG---Ia~~~~~~-~~a-~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++. +++| .+. +.. ...+|+++.++..+...+.
T Consensus 173 ~~~~~l~~~~~~~~~vGD-s~~Di~~a~~aG~~~v~v~~~-~~~~~~~~~~~a~~~~~~~~el~~~l~ 238 (240)
T 2hi0_A 173 ECVKVLGVPRDKCVYIGD-SEIDIQTARNSEMDEIAVNWG-FRSVPFLQKHGATVIVDTAEKLEEAIL 238 (240)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEESSS-SSCHHHHHHTTCCCEECSHHHHHHHHH
T ss_pred HHHHHcCCCHHHeEEEcC-CHHHHHHHHHCCCeEEEECCC-CCchhHHHhcCCCEEECCHHHHHHHhc
Confidence 333333333467999999 99999999999994 4444 222 332 2358888887777766553
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.82 E-value=1.9e-05 Score=76.36 Aligned_cols=120 Identities=11% Similarity=0.076 Sum_probs=83.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+ ++.|++. +++.++|+.....+..+.+.+|+... ...++.+++... ..-.|+--.
T Consensus 76 ~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~Kp~~~~~~ 135 (201)
T 2w43_A 76 YEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY--FKGIFSAESVKE----------------YKPSPKVYK 135 (201)
T ss_dssp CGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGTC----------------CTTCHHHHH
T ss_pred CCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh--CcEEEehhhcCC----------------CCCCHHHHH
Confidence 788999 9999999 99999999999999999999998642 233444432210 111233334
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceec-CC--CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE-EN--KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~-~~--~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+. ...++++|| +.||+.|.+.|+++..+ .. +..+.....+|+++.++..+.+++.
T Consensus 136 ~~~~~~~--~~~~~~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 198 (201)
T 2w43_A 136 YFLDSIG--AKEAFLVSS-NAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWIL 198 (201)
T ss_dssp HHHHHHT--CSCCEEEES-CHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHH
T ss_pred HHHHhcC--CCcEEEEeC-CHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHH
Confidence 4555555 567899999 99999999999998765 21 2222234468888777777776654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.9e-05 Score=80.15 Aligned_cols=123 Identities=15% Similarity=0.109 Sum_probs=86.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++.|+++.++|+.... ...+.+.+|+... ...++.+.+.. ...-.|+--.
T Consensus 108 ~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 168 (263)
T 3k1z_A 108 LDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREH--FDFVLTSEAAG----------------WPKPDPRIFQ 168 (263)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGG--CSCEEEHHHHS----------------SCTTSHHHHH
T ss_pred CcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHh--hhEEEeecccC----------------CCCCCHHHHH
Confidence 789999999999999999999987664 5778888998642 22333333221 1112333344
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCcceecCCCcchH-----HhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSST-RDTPALKEADVGITEENKCTEM-----ARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~-ND~~al~~AdvGIa~~~~~~~~-----a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-....+++||| +. ||+.|.++|++++++...+... ....+|+++.++..+.+++.
T Consensus 169 ~~~~~~g~~~~~~~~vGD-~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~ 236 (263)
T 3k1z_A 169 EALRLAHMEPVVAAHVGD-NYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALD 236 (263)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHH
T ss_pred HHHHHcCCCHHHEEEECC-CcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHH
Confidence 455555444567999999 97 9999999999998876333211 22368999888888888776
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.5e-05 Score=81.57 Aligned_cols=118 Identities=12% Similarity=-0.011 Sum_probs=80.8
Q ss_pred cccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNA-GVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~a-gi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.+++.+.++.|++. |+++.++|+.....+....+..|+.. ...++.+++.... .-.|+--
T Consensus 116 ~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~---f~~i~~~~~~~~~----------------kp~~~~~ 176 (275)
T 2qlt_A 116 VPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR---PEYFITANDVKQG----------------KPHPEPY 176 (275)
T ss_dssp CTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC---CSSEECGGGCSSC----------------TTSSHHH
T ss_pred CcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc---cCEEEEcccCCCC----------------CCChHHH
Confidence 78999999999999 99999999999999999888888853 2344444432110 0122223
Q ss_pred HHHHHHHHh-------CCCEEEEEeCCCCCCHHHHhhCCcceec---CCCcchHHhhccchhhcccccH
Q 044228 378 LLLVQTAKE-------KGHVVAFFGGSSTRDTPALKEADVGITE---ENKCTEMARECSDIVISTVGSL 436 (703)
Q Consensus 378 ~~iv~~lq~-------~g~~v~~iGD~G~ND~~al~~AdvGIa~---~~~~~~~a~~aad~vl~~~~~l 436 (703)
..+.+.+.- ..+.++++|| +.||+.|.+.|++++++ +.+..+..+..||+++.++..+
T Consensus 177 ~~~~~~lgi~~~~~~~~~~~~i~~GD-s~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el 244 (275)
T 2qlt_A 177 LKGRNGLGFPINEQDPSKSKVVVFED-APAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESI 244 (275)
T ss_dssp HHHHHHTTCCCCSSCGGGSCEEEEES-SHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGE
T ss_pred HHHHHHcCCCccccCCCcceEEEEeC-CHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHc
Confidence 334444443 4456999999 99999999999976554 4222333333589888755444
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.75 E-value=2.4e-05 Score=78.75 Aligned_cols=122 Identities=13% Similarity=0.138 Sum_probs=85.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|+ |+++.++|+.+...+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 95 ~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 154 (253)
T 1qq5_A 95 YPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAKR----------------VFKPHPDSYA 154 (253)
T ss_dssp CTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT----------------CCTTSHHHHH
T ss_pred CccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhh--ccEEEEccccC----------------CCCCCHHHHH
Confidence 789999999999 999999999999999999999998642 22333333221 1111233333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCC-----------------------c---chHHhhccchhhcc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENK-----------------------C---TEMARECSDIVIST 432 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~-----------------------~---~~~a~~aad~vl~~ 432 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|+++.++... + .+..+..+|+++.+
T Consensus 155 ~~~~~~~~~~~~~~~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (253)
T 1qq5_A 155 LVEEVLGVTPAEVLFVSS-NGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (253)
T ss_dssp HHHHHHCCCGGGEEEEES-CHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHcCCCHHHEEEEeC-ChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCC
Confidence 444444333457899999 99999999999999886532 1 12234468888888
Q ss_pred cccHHHHHh
Q 044228 433 VGSLLPILK 441 (703)
Q Consensus 433 ~~~l~~~i~ 441 (703)
+..+.+++.
T Consensus 234 ~~el~~~l~ 242 (253)
T 1qq5_A 234 LGDLPRLVR 242 (253)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887775
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.73 E-value=2.1e-05 Score=78.72 Aligned_cols=121 Identities=15% Similarity=0.032 Sum_probs=85.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++. +++.++|+........+.+.+|+.. ..++.++... ...-.|+--.
T Consensus 122 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f----~~~~~~~~~~----------------~~kp~~~~~~ 180 (254)
T 3umc_A 122 WPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW----DMLLCADLFG----------------HYKPDPQVYL 180 (254)
T ss_dssp CTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC----SEECCHHHHT----------------CCTTSHHHHH
T ss_pred CccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc----ceEEeecccc----------------cCCCCHHHHH
Confidence 78999999999985 9999999999998999999999852 2333332211 0111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCC----Ccc---hH--HhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEEN----KCT---EM--ARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~----~~~---~~--a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.+++||| +.||+.|.+.|+++++|.. .|. +. .+..+|+++.++..+.+++.
T Consensus 181 ~~~~~lgi~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 181 GACRLLDLPPQEVMLCAA-HNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHHH
T ss_pred HHHHHcCCChHHEEEEcC-chHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHhc
Confidence 344444334467999999 9999999999999999873 121 11 25678999888888887775
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=8.3e-05 Score=72.95 Aligned_cols=135 Identities=13% Similarity=0.049 Sum_probs=81.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE---------------LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~---------------~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
.|++.++++.|+++|+++.++|+.. ...+..+.+++|+.- ...+..+...+.... +..
T Consensus 52 ~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~~~~~~~~~~~~~~----~~~ 124 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DGIYYCPHHPQGSVE----EFR 124 (211)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCBTTCSSG----GGB
T ss_pred CcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EEEEECCcCCCCccc----ccC
Confidence 7999999999999999999999999 466777888888752 111211110000000 000
Q ss_pred ccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc--eec--CCCcchHHhhccchhhcccccHHHH
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG--ITE--ENKCTEMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG--Ia~--~~~~~~~a~~aad~vl~~~~~l~~~ 439 (703)
.. .....-.|+--..+.+.+.-..+.++|||| +.||+.+.++|++. +.+ |....+.....+|+++.++..+.++
T Consensus 125 ~~-~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD-~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 125 QV-CDCRKPHPGMLLSARDYLHIDMAASYMVGD-KLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp SC-CSSSTTSCHHHHHHHHHHTBCGGGCEEEES-SHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred cc-CcCCCCCHHHHHHHHHHcCCCHHHEEEEcC-CHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 00 001111232223344444434467899999 99999999999964 333 3212233334588888888888877
Q ss_pred Hhc
Q 044228 440 LKL 442 (703)
Q Consensus 440 i~~ 442 (703)
+..
T Consensus 203 l~~ 205 (211)
T 2gmw_A 203 IKK 205 (211)
T ss_dssp HHC
T ss_pred HHh
Confidence 653
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.70 E-value=3.9e-05 Score=72.99 Aligned_cols=105 Identities=16% Similarity=0.018 Sum_probs=68.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|++.. .+....+.+|+... ...++.+++.. ...-.|+--.
T Consensus 84 ~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 144 (190)
T 2fi1_A 84 FEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY--FTEVVTSSSGF----------------KRKPNPESML 144 (190)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG--EEEEECGGGCC----------------CCTTSCHHHH
T ss_pred CcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh--eeeeeeccccC----------------CCCCCHHHHH
Confidence 78999999999999999999998764 56677788887642 12233322110 0001122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhcc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECS 426 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aa 426 (703)
.+.+.+.-. .++++|| +.||++|.+.|++++++. +.....++..
T Consensus 145 ~~~~~~~~~--~~~~iGD-~~~Di~~a~~aG~~~~~~-~~~~~~~~~l 188 (190)
T 2fi1_A 145 YLREKYQIS--SGLVIGD-RPIDIEAGQAAGLDTHLF-TSIVNLRQVL 188 (190)
T ss_dssp HHHHHTTCS--SEEEEES-SHHHHHHHHHTTCEEEEC-SCHHHHHHHH
T ss_pred HHHHHcCCC--eEEEEcC-CHHHHHHHHHcCCeEEEE-CCCCChhhcc
Confidence 333333222 6899999 999999999999998866 3444444443
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.68 E-value=2.7e-05 Score=76.40 Aligned_cols=122 Identities=11% Similarity=0.025 Sum_probs=80.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC-ceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN-DIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.+++.+.++.++. ++.++|+........+.+++|+... . ..++.++....- .+ .-.|+--
T Consensus 89 ~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~------------~~--kpk~~~~ 149 (229)
T 2fdr_A 89 IDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY--FAPHIYSAKDLGAD------------RV--KPKPDIF 149 (229)
T ss_dssp CTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG--TTTCEEEHHHHCTT------------CC--TTSSHHH
T ss_pred CcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh--ccceEEeccccccC------------CC--CcCHHHH
Confidence 6778888877764 8999999999989999999988642 1 223333221100 00 0112222
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcch-------HHhhc-cchhhcccccHHHHHh
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTE-------MAREC-SDIVISTVGSLLPILK 441 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~-------~a~~a-ad~vl~~~~~l~~~i~ 441 (703)
..+.+.+.-..+.++++|| +.||++|++.|+++ ++++ ++.+ ..++. ||+++.++..+.+.+.
T Consensus 150 ~~~~~~l~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~ 220 (229)
T 2fdr_A 150 LHGAAQFGVSPDRVVVVED-SVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISRMQDLPAVIA 220 (229)
T ss_dssp HHHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHH
T ss_pred HHHHHHcCCChhHeEEEcC-CHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecCHHHHHHHHH
Confidence 3344444334467899999 99999999999998 6676 4443 35555 8999888888777664
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.68 E-value=3.5e-05 Score=75.90 Aligned_cols=121 Identities=9% Similarity=0.046 Sum_probs=83.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++ |+++.++|+..........+.++-. ...++.+.+.. ...-.|+-..
T Consensus 101 ~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~----fd~i~~~~~~~----------------~~KP~~~~~~ 159 (240)
T 3smv_A 101 FPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE----FDHIITAQDVG----------------SYKPNPNNFT 159 (240)
T ss_dssp CTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC----CSEEEEHHHHT----------------SCTTSHHHHH
T ss_pred CCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc----cCEEEEccccC----------------CCCCCHHHHH
Confidence 7899999999999 8999999999888777776654421 23444444322 1122333333
Q ss_pred HHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCcceecCCCc----------chHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEK---GHVVAFFGGSST-RDTPALKEADVGITEENKC----------TEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~-ND~~al~~AdvGIa~~~~~----------~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
..++.+++. .+.++++|| +. ||+.|.++|++++++...+ .+..+..+|+++.++..+.+++.
T Consensus 160 ~~l~~~~~lgi~~~~~~~vGD-~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~ 235 (240)
T 3smv_A 160 YMIDALAKAGIEKKDILHTAE-SLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHK 235 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEES-CTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHH
T ss_pred HHHHHHHhcCCCchhEEEECC-CchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHH
Confidence 443334433 457999999 96 9999999999999974221 13344678999888888877765
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.65 E-value=2.8e-05 Score=77.46 Aligned_cols=118 Identities=14% Similarity=0.067 Sum_probs=83.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++. +++.++|+........+.+.+|+.. ..++.++... ...|. .
T Consensus 118 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f----~~~~~~~~~~------------------~~kp~--~ 172 (254)
T 3umg_A 118 WPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW----DVIIGSDINR------------------KYKPD--P 172 (254)
T ss_dssp CTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC----SCCCCHHHHT------------------CCTTS--H
T ss_pred CcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe----eEEEEcCcCC------------------CCCCC--H
Confidence 78999999999997 9999999999999999999999852 2223322211 11221 2
Q ss_pred HHHH-HHHhC---CCEEEEEeCCCCCCHHHHhhCCcceecCCC----cc----hH-HhhccchhhcccccHHHHHhc
Q 044228 379 LLVQ-TAKEK---GHVVAFFGGSSTRDTPALKEADVGITEENK----CT----EM-ARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~-~lq~~---g~~v~~iGD~G~ND~~al~~AdvGIa~~~~----~~----~~-a~~aad~vl~~~~~l~~~i~~ 442 (703)
..++ .+++. .+.++++|| +.||+.|.+.|++++++... |. +. .+..+|+++.++..+.+++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAA-HNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeC-ChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 2222 23332 357999999 99999999999999997631 11 11 356789999999999888863
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00016 Score=72.41 Aligned_cols=116 Identities=9% Similarity=0.035 Sum_probs=80.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh--hh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--AD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P--~~ 376 (703)
.+++.+.++.|+ .|+++.++|+.....+....+.+|+... ... +++...| +-
T Consensus 114 ~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~-----------------------i~~~~kp~~~~ 167 (251)
T 2pke_A 114 IAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDL--FPR-----------------------IEVVSEKDPQT 167 (251)
T ss_dssp CTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGT--CCC-----------------------EEEESCCSHHH
T ss_pred CccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHh--Cce-----------------------eeeeCCCCHHH
Confidence 789999999999 9999999999998888888888887642 001 3333223 32
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCcceecCCCcch--------HHhhccch-hhcccccHHHHHh
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSST-RDTPALKEADVGITEENKCTE--------MARECSDI-VISTVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~-ND~~al~~AdvGIa~~~~~~~--------~a~~aad~-vl~~~~~l~~~i~ 441 (703)
-..+.+.+.-..+.++++|| +. ||+.|.+.|++++++-..+.. .....+|+ ++.++..+..++.
T Consensus 168 ~~~~~~~l~~~~~~~i~iGD-~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 241 (251)
T 2pke_A 168 YARVLSEFDLPAERFVMIGN-SLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHTCCGGGEEEEES-CCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHHH
T ss_pred HHHHHHHhCcCchhEEEECC-CchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHH
Confidence 23344444434567999999 99 999999999999774222321 11235787 7778888877664
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.56 E-value=9.2e-05 Score=71.01 Aligned_cols=87 Identities=14% Similarity=0.160 Sum_probs=65.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE--eChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE-LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS--CLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r--~~P~ 375 (703)
.|++.++++.|+++|+++.++||.. ...+..+.+.+|+... |.. ..+.
T Consensus 70 ~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~-----------------------------f~~~~~~~~ 120 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY-----------------------------FVHREIYPG 120 (187)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT-----------------------------EEEEEESSS
T ss_pred chhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh-----------------------------cceeEEEeC
Confidence 8999999999999999999999999 7899999999998752 221 1223
Q ss_pred hHHHHHHH-HHh---CCCEEEEEeCCCCCCHHHHhhCCcce-ecC
Q 044228 376 DKLLLVQT-AKE---KGHVVAFFGGSSTRDTPALKEADVGI-TEE 415 (703)
Q Consensus 376 ~K~~iv~~-lq~---~g~~v~~iGD~G~ND~~al~~AdvGI-a~~ 415 (703)
.|.+..+. +++ ..+.++++|| +.||+.+.++|++.. .+.
T Consensus 121 ~k~~~~~~~~~~~~~~~~~~~~igD-~~~Di~~a~~aG~~~i~v~ 164 (187)
T 2wm8_A 121 SKITHFERLQQKTGIPFSQMIFFDD-ERRNIVDVSKLGVTCIHIQ 164 (187)
T ss_dssp CHHHHHHHHHHHHCCCGGGEEEEES-CHHHHHHHHTTTCEEEECS
T ss_pred chHHHHHHHHHHcCCChHHEEEEeC-CccChHHHHHcCCEEEEEC
Confidence 34333332 233 2356899999 999999999999854 344
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.50 E-value=6.1e-05 Score=73.51 Aligned_cols=115 Identities=15% Similarity=0.107 Sum_probs=79.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe-ChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC-LAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~-~P~~K 377 (703)
.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+... ... +++.- .+.-|
T Consensus 86 ~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~--f~~-----------------------i~~~~~~~Kp~ 139 (210)
T 2ah5_A 86 FPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHF--FDG-----------------------IYGSSPEAPHK 139 (210)
T ss_dssp CTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGG--CSE-----------------------EEEECSSCCSH
T ss_pred CCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhh--eee-----------------------eecCCCCCCCC
Confidence 7899999999999 999999999988888888889998642 111 22211 11223
Q ss_pred HHHHHH-HHhC---CCEEEEEeCCCCCCHHHHhhCCc---ceecCCCcchHHh-hccchhhcccccHHHHH
Q 044228 378 LLLVQT-AKEK---GHVVAFFGGSSTRDTPALKEADV---GITEENKCTEMAR-ECSDIVISTVGSLLPIL 440 (703)
Q Consensus 378 ~~iv~~-lq~~---g~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~~~~a~-~aad~vl~~~~~l~~~i 440 (703)
.++.+. +++. .+.++++|| +.||+.|.++|++ ++++|....+..+ ..+|+++.++..+.+++
T Consensus 140 p~~~~~~~~~lg~~p~~~~~vgD-s~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~l 209 (210)
T 2ah5_A 140 ADVIHQALQTHQLAPEQAIIIGD-TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred hHHHHHHHHHcCCCcccEEEECC-CHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 333333 3333 356999999 9999999999999 6666632133333 35888887777666543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0004 Score=66.66 Aligned_cols=129 Identities=13% Similarity=0.090 Sum_probs=85.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL---LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~---~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.|++.++++.|+++|+++.++|+... ..+..+.+.+|+... ...++.+.+.... .-...-.|+
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~~------------~~~~KP~p~ 101 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDY--FDFIYASNSELQP------------GKMEKPDKT 101 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGG--EEEEEECCTTSST------------TCCCTTSHH
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhh--eEEEEEccccccc------------cCCCCcCHH
Confidence 89999999999999999999998776 888899999998652 1222222211000 001111223
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCC-CCCHHHHhhCCccee-cCCCcch-----H-Hhhccchhhc--ccccHHHHHhcc
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSS-TRDTPALKEADVGIT-EENKCTE-----M-ARECSDIVIS--TVGSLLPILKLG 443 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G-~ND~~al~~AdvGIa-~~~~~~~-----~-a~~aad~vl~--~~~~l~~~i~~g 443 (703)
--..+.+.+.-....+++||| + .+|+.+-++|++... +. .+.. . ....+|+++. ++..+.++++..
T Consensus 102 ~~~~~~~~~~~~~~~~l~VGD-~~~~Di~~A~~aG~~~i~v~-~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 102 IFDFTLNALQIDKTEAVMVGN-TFESDIIGANRAGIHAIWLQ-NPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp HHHHHHHHHTCCGGGEEEEES-BTTTTHHHHHHTTCEEEEEC-CTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECC-CcHHHHHHHHHCCCeEEEEC-CccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 333444444444567999999 9 799999999999644 43 2221 1 1126788888 888888887643
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0004 Score=67.55 Aligned_cols=124 Identities=17% Similarity=0.199 Sum_probs=82.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++.|+++.++|+.+...+....+.+|+... ...++.+++... ..-.|+-=.
T Consensus 86 ~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~--fd~~~~~~~~~~----------------~KP~p~~~~ 147 (216)
T 3kbb_A 86 NPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKY--FDVMVFGDQVKN----------------GKPDPEIYL 147 (216)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECGGGSSS----------------CTTSTHHHH
T ss_pred CccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcc--ccccccccccCC----------------CcccHHHHH
Confidence 68999999999999999999999999999999999998753 233444333211 111233223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-e---ecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-I---TEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-I---a~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++|||| ..+|+.+-++|++. | .-|.+..+...++.+..+.+...+.+.++
T Consensus 148 ~a~~~lg~~p~e~l~VgD-s~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~ 213 (216)
T 3kbb_A 148 LVLERLNVVPEKVVVFED-SKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLK 213 (216)
T ss_dssp HHHHHHTCCGGGEEEEEC-SHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHH
T ss_pred HHHHhhCCCccceEEEec-CHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHH
Confidence 344444444567999999 99999999999984 2 22323334444444444445555665554
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00027 Score=71.60 Aligned_cols=41 Identities=24% Similarity=0.165 Sum_probs=34.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSE---DELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TG---D~~~ta~~ia~~~gi~~~ 339 (703)
-++++++|++++++|++++++|| +.........+++|+...
T Consensus 26 ~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 26 IPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 35799999999999999999999 667777777788888643
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00019 Score=68.98 Aligned_cols=97 Identities=9% Similarity=-0.045 Sum_probs=69.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.| ++.++|+.+......+.+.+|+... ...++.+.+.. ...-.|+--.
T Consensus 88 ~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 148 (200)
T 3cnh_A 88 RPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEF--LLAFFTSSALG----------------VMKPNPAMYR 148 (200)
T ss_dssp CHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGT--CSCEEEHHHHS----------------CCTTCHHHHH
T ss_pred CccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHh--cceEEeecccC----------------CCCCCHHHHH
Confidence 789999999999999 9999999999999999899997642 22233332211 1111233333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
.+.+.+.-..+.++++|| +.||+.|.+.|++...+-
T Consensus 149 ~~~~~~~~~~~~~~~vgD-~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 149 LGLTLAQVRPEEAVMVDD-RLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHHHHHHTTCEEEEC
T ss_pred HHHHHcCCCHHHeEEeCC-CHHHHHHHHHCCCEEEEE
Confidence 444444434567999999 999999999999987754
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00013 Score=71.85 Aligned_cols=133 Identities=14% Similarity=0.032 Sum_probs=77.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCceeeechhh-hccCHHHHHHh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELGNFRPESNDIALEGEQF-RELNSTERMAK 362 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~vi~g~~l-~~~~~~~~~~~ 362 (703)
.+++.++++.|+++|+++.++|+... ..+..+.+++|+.-. ......... ..+. +.
T Consensus 58 ~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~~~g~~~-----~~ 129 (218)
T 2o2x_A 58 RPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD---MVLACAYHEAGVGP-----LA 129 (218)
T ss_dssp CGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCCTTCCST-----TC
T ss_pred CcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee---eEEEeecCCCCcee-----ec
Confidence 78999999999999999999999987 677778888887421 111000000 0000 00
Q ss_pred hccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce--ecCC-Ccc-hHHhhccchhhcccccHHH
Q 044228 363 LDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI--TEEN-KCT-EMARECSDIVISTVGSLLP 438 (703)
Q Consensus 363 ~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI--a~~~-~~~-~~a~~aad~vl~~~~~l~~ 438 (703)
...+ .+..-.|+-=..+.+.+.-..+.++|||| +.||+.+.+.|++.. .+.. ... +.....+|+++.++..+.+
T Consensus 130 ~~~~-~~~KP~~~~~~~~~~~~~i~~~~~~~VGD-~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~ 207 (218)
T 2o2x_A 130 IPDH-PMRKPNPGMLVEAGKRLALDLQRSLIVGD-KLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLA 207 (218)
T ss_dssp CSSC-TTSTTSCHHHHHHHHHHTCCGGGCEEEES-SHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHH
T ss_pred ccCC-ccCCCCHHHHHHHHHHcCCCHHHEEEEeC-CHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHH
Confidence 0000 00000111112223333323456899999 999999999999764 3321 111 1222357888778777777
Q ss_pred HHh
Q 044228 439 ILK 441 (703)
Q Consensus 439 ~i~ 441 (703)
++.
T Consensus 208 ~l~ 210 (218)
T 2o2x_A 208 AIE 210 (218)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.29 E-value=9.2e-05 Score=71.76 Aligned_cols=98 Identities=11% Similarity=0.004 Sum_probs=67.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH------cCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE------LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~------~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
.|++.+.++.|++ |+++.++|+.....+..+.+. .|+... ...++.+.+.. ...-
T Consensus 91 ~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~--f~~~~~~~~~~----------------~~Kp 151 (211)
T 2i6x_A 91 SAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF--FDKVYASCQMG----------------KYKP 151 (211)
T ss_dssp CHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG--SSEEEEHHHHT----------------CCTT
T ss_pred ChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH--cCeEEeecccC----------------CCCC
Confidence 7899999999999 999999999988887777766 566432 12233332211 1111
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
.|+--..+.+.+.-..+.++++|| +.||+.|.+.|+++..+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igD-~~~Di~~a~~aG~~~~~~~ 194 (211)
T 2i6x_A 152 NEDIFLEMIADSGMKPEETLFIDD-GPANVATAERLGFHTYCPD 194 (211)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEECS-CHHHHHHHHHTTCEEECCC
T ss_pred CHHHHHHHHHHhCCChHHeEEeCC-CHHHHHHHHHcCCEEEEEC
Confidence 222333444444434567999999 9999999999999988773
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00046 Score=69.81 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=34.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSE---DELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TG---D~~~ta~~ia~~~gi~~~ 339 (703)
-++++++|++++++|++++++|| ..........+++|+...
T Consensus 24 ~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 24 IEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 35789999999999999999988 667777777888888643
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00029 Score=68.99 Aligned_cols=117 Identities=19% Similarity=0.186 Sum_probs=76.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++. +++.++|+.... -+.+|+... ...++.+++.. ...-.|+--.
T Consensus 107 ~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 162 (230)
T 3vay_A 107 FPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY--FAFALCAEDLG----------------IGKPDPAPFL 162 (230)
T ss_dssp CTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG--CSEEEEHHHHT----------------CCTTSHHHHH
T ss_pred CcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH--eeeeEEccccC----------------CCCcCHHHHH
Confidence 78999999999998 999999987654 244555432 12222222211 0111222233
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCcceec---CCCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSST-RDTPALKEADVGITE---ENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~-ND~~al~~AdvGIa~---~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-....++++|| +. ||+.|.+.|+++.++ +.+..+. ...+|+++.++..+.+++.
T Consensus 163 ~~~~~~~~~~~~~~~vGD-~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~l~el~~~l~ 227 (230)
T 3vay_A 163 EALRRAKVDASAAVHVGD-HPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESSGGGHHHHHH
T ss_pred HHHHHhCCCchheEEEeC-ChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECCHHHHHHHHH
Confidence 444444434567999999 98 999999999998775 2122222 5578998889988888775
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00029 Score=70.89 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=33.1
Q ss_pred CCEEEEEeCC---CCCCHHHHhhCC-cceecCCCcchHHhhccchh
Q 044228 388 GHVVAFFGGS---STRDTPALKEAD-VGITEENKCTEMARECSDIV 429 (703)
Q Consensus 388 g~~v~~iGD~---G~ND~~al~~Ad-vGIa~~~~~~~~a~~aad~v 429 (703)
.+.|+++||. |.||.+||+.|+ +|++|+ ++.+..+..+++.
T Consensus 199 ~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 199 FEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKII 243 (246)
T ss_dssp CSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHHH
T ss_pred cccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHHh
Confidence 3679999993 399999999996 899999 7888877655443
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00057 Score=69.14 Aligned_cols=123 Identities=13% Similarity=0.100 Sum_probs=83.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++ |+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+--.
T Consensus 123 ~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~KP~p~~~~ 183 (260)
T 2gfh_A 123 ADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY--FDAIVIGGEQK----------------EEKPAPSIFY 183 (260)
T ss_dssp CHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGSS----------------SCTTCHHHHH
T ss_pred CcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhh--hheEEecCCCC----------------CCCCCHHHHH
Confidence 7899999999998 599999999999988898899998753 22333333221 0111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCC-CCCHHHHhhCCc--ceecCCCcch--HHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSS-TRDTPALKEADV--GITEENKCTE--MARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G-~ND~~al~~Adv--GIa~~~~~~~--~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-....++|||| . .||+.+-++|++ .|.+...+.. .....+|+++.++..+.+++.
T Consensus 184 ~~~~~~~~~~~~~~~vGD-s~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 250 (260)
T 2gfh_A 184 HCCDLLGVQPGDCVMVGD-TLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQ 250 (260)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHH
T ss_pred HHHHHcCCChhhEEEECC-CchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHH
Confidence 334444334467999999 8 899999999999 5777532211 123457888778887777664
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00015 Score=65.00 Aligned_cols=94 Identities=14% Similarity=0.029 Sum_probs=64.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.|+--.
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~----------------~~Kp~~~~~~ 81 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGV--VDKVLLSGELG----------------VEKPEEAAFQ 81 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTS--SSEEEEHHHHS----------------CCTTSHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhh--ccEEEEeccCC----------------CCCCCHHHHH
Confidence 78899999999999999999999998888888888887642 22333332211 0111222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.+.+.+.-..+.++++|| +.+|+.+.++|++.
T Consensus 82 ~~~~~~~~~~~~~~~vgD-~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 82 AAADAIDLPMRDCVLVDD-SILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHTTCCGGGEEEEES-CHHHHHHHHHHTCE
T ss_pred HHHHHcCCCcccEEEEcC-CHHHHHHHHHCCCE
Confidence 233333323346899999 99999999999874
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.91 E-value=9e-05 Score=71.45 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=61.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE-LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.|++.+.++.|++.|+++.++|+........+.+. .|+... ...++.+.+.. ...-.|+--
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~~ 154 (206)
T 2b0c_A 93 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDLG----------------MRKPEARIY 154 (206)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEEHHHHT----------------CCTTCHHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh--eeeEEEecccC----------------CCCCCHHHH
Confidence 78999999999999999999998765443322222 222110 01122221110 011123333
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
..+.+.+.-..+.++++|| +.||+.|.+.|++...+.
T Consensus 155 ~~~~~~~~~~~~~~~~vgD-~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 155 QHVLQAEGFSPSDTVFFDD-NADNIEGANQLGITSILV 191 (206)
T ss_dssp HHHHHHHTCCGGGEEEEES-CHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHcCCCHHHeEEeCC-CHHHHHHHHHcCCeEEEe
Confidence 3445555444567999999 999999999999987765
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0041 Score=62.23 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=34.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVS---EDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~~ 338 (703)
-++..++++.+++.|+++.++| |..........+++|+..
T Consensus 34 ~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 34 IAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp CTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 3667888999999999999999 999888888888888754
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0013 Score=70.52 Aligned_cols=133 Identities=16% Similarity=0.128 Sum_probs=84.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.++++.|+++|+++.++|+.....+..+.+..|+...-+...++.+++.... .+..+...-. ..|.-.
T Consensus 217 ~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-----~~~~~~~kp~--~KP~P~- 288 (384)
T 1qyi_A 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-----ENMYPQARPL--GKPNPF- 288 (384)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-----HHHSTTSCCC--CTTSTH-
T ss_pred CcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc-----ccccccccCC--CCCCHH-
Confidence 89999999999999999999999999999999999998753111145555543210 0000000000 112111
Q ss_pred HHHHHHHh-----------------CCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcc-------hHHhhccchhhccc
Q 044228 379 LLVQTAKE-----------------KGHVVAFFGGSSTRDTPALKEADVG-ITEENKCT-------EMARECSDIVISTV 433 (703)
Q Consensus 379 ~iv~~lq~-----------------~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~-------~~a~~aad~vl~~~ 433 (703)
-+...+++ ....+++||| +.+|+.+-++|++. |++. .+. +.....+|+++.++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGD-s~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGD-SLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVINHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEES-SHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEESSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcC-CHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEECCH
Confidence 11222222 2367899999 99999999999975 4444 221 12223588988888
Q ss_pred ccHHHHHh
Q 044228 434 GSLLPILK 441 (703)
Q Consensus 434 ~~l~~~i~ 441 (703)
..+..++.
T Consensus 367 ~eL~~~l~ 374 (384)
T 1qyi_A 367 GELRGVLD 374 (384)
T ss_dssp GGHHHHHS
T ss_pred HHHHHHHH
Confidence 88887775
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.00072 Score=66.50 Aligned_cols=97 Identities=10% Similarity=-0.034 Sum_probs=65.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH------HcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVAC------ELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~------~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
.|++.+.++.|++. +++.++|+.+...+..+.+ ..|+... ...++.+.+.. ...-
T Consensus 114 ~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~--fd~i~~~~~~~----------------~~KP 174 (229)
T 4dcc_A 114 PTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY--FEKTYLSYEMK----------------MAKP 174 (229)
T ss_dssp CHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH--CSEEEEHHHHT----------------CCTT
T ss_pred cHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh--CCEEEeecccC----------------CCCC
Confidence 68999999999999 9999999999888876663 3444321 11222222211 1111
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
.|+--..+.+.+.-..+.++++|| +.||+.|.++|+++..+.
T Consensus 175 ~~~~~~~~~~~~g~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v 216 (229)
T 4dcc_A 175 EPEIFKAVTEDAGIDPKETFFIDD-SEINCKVAQELGISTYTP 216 (229)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEECS-CHHHHHHHHHTTCEEECC
T ss_pred CHHHHHHHHHHcCCCHHHeEEECC-CHHHHHHHHHcCCEEEEE
Confidence 233333445555444567999999 999999999999998876
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0025 Score=64.39 Aligned_cols=40 Identities=20% Similarity=0.243 Sum_probs=35.4
Q ss_pred ccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCCCC
Q 044228 300 EEIKSTVEALRNAGVRIILVS---EDELLAVTEVACELGNFRP 339 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~~~ 339 (703)
++++++|++++++|++++++| |..........+++|+...
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 688999999999999999999 8888888888888898653
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0014 Score=66.46 Aligned_cols=55 Identities=18% Similarity=0.351 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHhC--CCEEEEEeCC---CCCCHHHHhhCC-cceecCCCcchHHhhccchhhc
Q 044228 375 ADKLLLVQTAKEK--GHVVAFFGGS---STRDTPALKEAD-VGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 375 ~~K~~iv~~lq~~--g~~v~~iGD~---G~ND~~al~~Ad-vGIa~~~~~~~~a~~aad~vl~ 431 (703)
..|..-++.+ .. .+.|+++||. |.||.+||+.|+ +|++|+ |+.+..++.||+++.
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~ 256 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 256 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCC
Confidence 4688888888 22 4689999995 699999999999 599998 899999999999876
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0037 Score=60.40 Aligned_cols=116 Identities=16% Similarity=0.091 Sum_probs=72.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|+++.++||.....+..+.. .. ...++.+++.. +..|. ..
T Consensus 38 ~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~----~d~v~~~~~~~------------------~~KP~-p~ 91 (196)
T 2oda_A 38 TPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV----NDWMIAAPRPT------------------AGWPQ-PD 91 (196)
T ss_dssp CTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT----TTTCEECCCCS------------------SCTTS-TH
T ss_pred CcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc----CCEEEECCcCC------------------CCCCC-hH
Confidence 7999999999999999999999998887755443 11 11122222110 11221 12
Q ss_pred HHHHHHHhCC----CEEEEEeCCCCCCHHHHhhCCc-ceecCCCcc--------------------------hHHhhccc
Q 044228 379 LLVQTAKEKG----HVVAFFGGSSTRDTPALKEADV-GITEENKCT--------------------------EMARECSD 427 (703)
Q Consensus 379 ~iv~~lq~~g----~~v~~iGD~G~ND~~al~~Adv-GIa~~~~~~--------------------------~~a~~aad 427 (703)
-+.+.+++.| +.++|||| ..+|+.+-++|++ .|++..... +.....+|
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d 170 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISG-DPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVH 170 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEES-CHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCCCccEEEEeC-CHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCC
Confidence 2333344332 56899999 9999999999997 455531111 01123478
Q ss_pred hhhcccccHHHHHh
Q 044228 428 IVISTVGSLLPILK 441 (703)
Q Consensus 428 ~vl~~~~~l~~~i~ 441 (703)
+++.++..+..++.
T Consensus 171 ~vi~~~~eL~~~l~ 184 (196)
T 2oda_A 171 SVIDHLGELESCLA 184 (196)
T ss_dssp EEESSGGGHHHHHH
T ss_pred EEeCCHHHHHHHHH
Confidence 88888888877664
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0029 Score=63.32 Aligned_cols=114 Identities=12% Similarity=0.148 Sum_probs=77.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+... ...++.+++... ..-.|+-=.
T Consensus 118 ~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~--Fd~i~~~~~~~~----------------~KP~p~~~~ 177 (250)
T 4gib_A 118 LPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDK--FDFIADAGKCKN----------------NKPHPEIFL 177 (250)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGG--CSEECCGGGCCS----------------CTTSSHHHH
T ss_pred chhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccc--cceeecccccCC----------------CCCcHHHHH
Confidence 6899999999999999998877654 35667788898753 344444443321 112233333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecCCCcchHHhhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEENKCTEMARECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~~~~~~~a~~aad~vl~~~~~l 436 (703)
.+.+.+.-..+.+++||| ..+|+.+-++|++ .|+++ +..+. ..||+++.++..+
T Consensus 178 ~a~~~lg~~p~e~l~VGD-s~~Di~aA~~aG~~~i~v~-~~~~~--~~ad~vi~~l~eL 232 (250)
T 4gib_A 178 MSAKGLNVNPQNCIGIED-ASAGIDAINSANMFSVGVG-NYENL--KKANLVVDSTNQL 232 (250)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEES-CTTTT--TTSSEEESSGGGC
T ss_pred HHHHHhCCChHHeEEECC-CHHHHHHHHHcCCEEEEEC-ChhHh--ccCCEEECChHhC
Confidence 444555444567999999 9999999999998 56665 33333 3589988866665
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0029 Score=61.76 Aligned_cols=117 Identities=11% Similarity=0.032 Sum_probs=69.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|+++|+++.++|+... .+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 97 ~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 157 (220)
T 2zg6_A 97 YDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKY--FDALALSYEIK----------------AVKPNPKIFG 157 (220)
T ss_dssp CTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGG--CSEEC---------------------------CCHHH
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhH--eeEEEeccccC----------------CCCCCHHHHH
Confidence 79999999999999999999999866 47788888898642 12222222110 1111122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCC-CHHHHhhCCccee-cCCCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTR-DTPALKEADVGIT-EENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~N-D~~al~~AdvGIa-~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.- .. +++|| +.+ |+.+-++|++... +. .+... .+. +.++.++..+..++.
T Consensus 158 ~~~~~~~~--~~-~~vgD-~~~~Di~~a~~aG~~~i~v~-~~~~~-~~~-~~~i~~l~el~~~l~ 215 (220)
T 2zg6_A 158 FALAKVGY--PA-VHVGD-IYELDYIGAKRSYVDPILLD-RYDFY-PDV-RDRVKNLREALQKIE 215 (220)
T ss_dssp HHHHHHCS--SE-EEEES-SCCCCCCCSSSCSEEEEEBC-TTSCC-TTC-CSCBSSHHHHHHHHH
T ss_pred HHHHHcCC--Ce-EEEcC-CchHhHHHHHHCCCeEEEEC-CCCCC-CCc-ceEECCHHHHHHHHH
Confidence 23333322 23 89999 998 9999999998754 43 22111 111 444446666665553
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0039 Score=62.76 Aligned_cols=81 Identities=15% Similarity=0.138 Sum_probs=62.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL----LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.|++.+.++.|+++|+++.++||.+. +.+..-.+++|+....+.. ++-|...
T Consensus 103 ~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~------------------------Lilr~~~ 158 (260)
T 3pct_A 103 IPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKT------------------------LLLKKDK 158 (260)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTT------------------------EEEESSC
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccce------------------------eEecCCC
Confidence 78999999999999999999999865 3666677889997521111 4444344
Q ss_pred hhHHHHHHHHHhCC-CEEEEEeCCCCCCHHH
Q 044228 375 ADKLLLVQTAKEKG-HVVAFFGGSSTRDTPA 404 (703)
Q Consensus 375 ~~K~~iv~~lq~~g-~~v~~iGD~G~ND~~a 404 (703)
..|....+.+++.| ..|+++|| ..+|.++
T Consensus 159 ~~K~~~r~~L~~~gy~iv~~iGD-~~~Dl~~ 188 (260)
T 3pct_A 159 SNKSVRFKQVEDMGYDIVLFVGD-NLNDFGD 188 (260)
T ss_dssp SSSHHHHHHHHTTTCEEEEEEES-SGGGGCG
T ss_pred CChHHHHHHHHhcCCCEEEEECC-ChHHcCc
Confidence 67888888888854 47888999 9999976
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.003 Score=63.75 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=35.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVS---EDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~~ 338 (703)
-+++.++++.|+++|++++++| |..........+++|+..
T Consensus 35 ~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 35 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5678899999999999999999 888888888888888864
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0016 Score=65.08 Aligned_cols=54 Identities=19% Similarity=0.286 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHh--CCCEEEEEeCC---CCCCHHHHhhCCc-ceecCCCcchHHhhccchhh
Q 044228 375 ADKLLLVQTAKE--KGHVVAFFGGS---STRDTPALKEADV-GITEENKCTEMARECSDIVI 430 (703)
Q Consensus 375 ~~K~~iv~~lq~--~g~~v~~iGD~---G~ND~~al~~Adv-GIa~~~~~~~~a~~aad~vl 430 (703)
..|..-++.+ . ..+.|+++||. |.||.+||+.|+. |++|+ |+.+..|+.||+|.
T Consensus 187 ~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 187 WDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLFS 246 (246)
T ss_dssp CSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHCC
T ss_pred CchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhcC
Confidence 3677777777 2 24689999996 7999999999988 99999 89999999999974
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0036 Score=61.61 Aligned_cols=47 Identities=11% Similarity=0.073 Sum_probs=33.3
Q ss_pred CCEEEEEeCCC-CCCHHHHhhCCccee---cCCCcc-hHHh---hccchhhcccccH
Q 044228 388 GHVVAFFGGSS-TRDTPALKEADVGIT---EENKCT-EMAR---ECSDIVISTVGSL 436 (703)
Q Consensus 388 g~~v~~iGD~G-~ND~~al~~AdvGIa---~~~~~~-~~a~---~aad~vl~~~~~l 436 (703)
.+.++++|| + .||+.|++.|+++++ +| ++. +..+ ..+|+++.++..+
T Consensus 193 ~~~~i~iGD-~~~nDi~~~~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 193 SEETVIVGD-NLRTDILAGFQAGLETILVLSG-VSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp GGGEEEEES-CTTTHHHHHHHTTCEEEEESSS-SCCGGGGSSCSSCCSEEESSGGGC
T ss_pred cceEEEECC-CchhHHHHHHHcCCeEEEECCC-CCChhhhhhcCCCCCEEECCHHHh
Confidence 467999999 9 799999999999854 44 233 3333 3578887755443
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0049 Score=62.12 Aligned_cols=81 Identities=11% Similarity=0.063 Sum_probs=61.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL----LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.|++.+.++.|+++|+++.++||.+. +.+..-.+++|+....+.. ++-|..-
T Consensus 103 ~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~------------------------Lilr~~~ 158 (262)
T 3ocu_A 103 VPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESA------------------------FYLKKDK 158 (262)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGG------------------------EEEESSC
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccc------------------------eeccCCC
Confidence 78999999999999999999999865 4666667789997520001 4444334
Q ss_pred hhHHHHHHHHHhCC-CEEEEEeCCCCCCHHH
Q 044228 375 ADKLLLVQTAKEKG-HVVAFFGGSSTRDTPA 404 (703)
Q Consensus 375 ~~K~~iv~~lq~~g-~~v~~iGD~G~ND~~a 404 (703)
..|....+.+++.| ..|+++|| ..+|.++
T Consensus 159 ~~K~~~r~~l~~~Gy~iv~~vGD-~~~Dl~~ 188 (262)
T 3ocu_A 159 SAKAARFAEIEKQGYEIVLYVGD-NLDDFGN 188 (262)
T ss_dssp SCCHHHHHHHHHTTEEEEEEEES-SGGGGCS
T ss_pred CChHHHHHHHHhcCCCEEEEECC-ChHHhcc
Confidence 66888888888875 46889999 9999875
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0074 Score=59.37 Aligned_cols=113 Identities=11% Similarity=0.169 Sum_probs=73.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|+++| ++.++|+.....+..+.+.+|+... +.. .+... ..|.
T Consensus 98 ~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~-----------------------f~~-~~~~~---~~K~ 149 (231)
T 2p11_A 98 YPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE-----------------------VEG-RVLIY---IHKE 149 (231)
T ss_dssp CTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH-----------------------TTT-CEEEE---SSGG
T ss_pred CccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh-----------------------cCe-eEEec---CChH
Confidence 799999999999999 9999999998888888888887531 000 01111 1232
Q ss_pred HHHHHHHh--CCCEEEEEeCCCCC---CHHHHhhCCcc-eecCCCc----c-hHHhh--ccchhhcccccHHHHHh
Q 044228 379 LLVQTAKE--KGHVVAFFGGSSTR---DTPALKEADVG-ITEENKC----T-EMARE--CSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~--~g~~v~~iGD~G~N---D~~al~~AdvG-Ia~~~~~----~-~~a~~--aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.+ ....++++|| +.| |+.+-+.|++. |.+. .+ . +..++ .+|+++.++..+.+++.
T Consensus 150 ~~~~~~~~~~~~~~~~~vgD-s~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l~ 223 (231)
T 2p11_A 150 LMLDQVMECYPARHYVMVDD-KLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVERIGDLVEMDA 223 (231)
T ss_dssp GCHHHHHHHSCCSEEEEECS-CHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEESSGGGGGGCGG
T ss_pred HHHHHHHhcCCCceEEEEcC-ccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeecCHHHHHHHHH
Confidence 33333332 4568999999 999 55555667753 3343 22 1 22223 27888887777766554
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.011 Score=61.99 Aligned_cols=119 Identities=13% Similarity=0.045 Sum_probs=72.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc----CCCCCCCCceeee-----chhhhccC-HHHHHHh------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL----GNFRPESNDIALE-----GEQFRELN-STERMAK------ 362 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~----gi~~~~~~~~vi~-----g~~l~~~~-~~~~~~~------ 362 (703)
.++..+.++.|+++|++|+++||-....++.+|..+ ||... +.+... +..-.... ..+..+-
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e--~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~~~ 222 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE--NVIGVTTLLKNRKTGELTTARKQIAEGKYDPKA 222 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG--GEEEECEEEECTTTCCEECHHHHHHTTCCCGGG
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH--HeEeeeeeeeccccccccccccccccccccccc
Confidence 889999999999999999999999999999999885 55542 211111 00000000 0011110
Q ss_pred hccCceEEE-----eChhhHHHHHHHHHhCC-CEEEEEeCCCC-CCHHHHhh--CCcceecCCCcch
Q 044228 363 LDSMTLMGS-----CLAADKLLLVQTAKEKG-HVVAFFGGSST-RDTPALKE--ADVGITEENKCTE 420 (703)
Q Consensus 363 ~~~~~v~~r-----~~P~~K~~iv~~lq~~g-~~v~~iGD~G~-ND~~al~~--AdvGIa~~~~~~~ 420 (703)
..+...-.+ +--+.|...|+...+.| ..+++.|| +. .|.+||+. ++.|+++-.+-.+
T Consensus 223 ~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gn-s~dgD~~ML~~~~~~~~~~L~in~~~ 288 (327)
T 4as2_A 223 NLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGD-TPDSDGYMLFNGTAENGVHLWVNRKA 288 (327)
T ss_dssp GTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEES-CHHHHHHHHHHTSCTTCEEEEECCCH
T ss_pred cccccccccccccccccCccHHHHHHHHhhCCCCeEEecC-CCCCCHHHHhccccCCCeEEEEecCC
Confidence 001111111 22467888887765443 56899999 94 79999965 5666664433433
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.0077 Score=56.93 Aligned_cols=95 Identities=6% Similarity=0.102 Sum_probs=61.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCceeeec----hhhhccCHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSED---------------ELLAVTEVACELGNFRPESNDIALEG----EQFRELNSTER 359 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~~~vi~g----~~l~~~~~~~~ 359 (703)
.|++.++++.|+++|+++.++|+. ....+..+.+..|+.. ...+..+ .+..
T Consensus 44 ~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~v~~s~~~~~~~~~------- 113 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF---DEVLICPHLPADECD------- 113 (176)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE---EEEEEECCCGGGCCS-------
T ss_pred CccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe---eEEEEcCCCCccccc-------
Confidence 899999999999999999999997 4667778888888851 1111221 1110
Q ss_pred HHhhccCceEEEeChhh--HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 360 MAKLDSMTLMGSCLAAD--KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 360 ~~~~~~~~v~~r~~P~~--K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
...|.- =..+.+.+.-..+.++|||| ..+|+.+-++|++. |.+.
T Consensus 114 -----------~~KP~p~~~~~~~~~~gi~~~~~l~VGD-~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 114 -----------CRKPKVKLVERYLAEQAMDRANSYVIGD-RATDIQLAENMGINGLRYD 160 (176)
T ss_dssp -----------SSTTSCGGGGGGC----CCGGGCEEEES-SHHHHHHHHHHTSEEEECB
T ss_pred -----------ccCCCHHHHHHHHHHcCCCHHHEEEEcC-CHHHHHHHHHcCCeEEEEc
Confidence 011110 01112222223456899999 99999999999985 4455
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.65 E-value=0.11 Score=51.52 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=30.0
Q ss_pred ccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHHcCCCC
Q 044228 300 EEIKSTVEALRNAGVRIILVS---EDELLAVTEVACELGNFR 338 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~~gi~~ 338 (703)
+++.++++.++++|++++++| |.........-++.|+..
T Consensus 26 ~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 26 PGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp TTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 567788999999999999999 555555555556677754
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.51 E-value=0.026 Score=56.91 Aligned_cols=83 Identities=18% Similarity=0.185 Sum_probs=52.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL---LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~---~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.|++.++|+.|+++|+++.++||... ......-+.+|+..-.....++.+++. -.|.
T Consensus 103 ~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--------------------~K~~ 162 (258)
T 2i33_A 103 LPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--------------------KGKE 162 (258)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--------------------CSSH
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--------------------CCcH
Confidence 78999999999999999999999883 344445567788721112334433321 0121
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHH
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPAL 405 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al 405 (703)
-...++ +..-..++|+|| ..||+.+-
T Consensus 163 ~~~~~~---~~~~~~~l~VGD-s~~Di~aA 188 (258)
T 2i33_A 163 KRRELV---SQTHDIVLFFGD-NLSDFTGF 188 (258)
T ss_dssp HHHHHH---HHHEEEEEEEES-SGGGSTTC
T ss_pred HHHHHH---HhCCCceEEeCC-CHHHhccc
Confidence 111111 122235889999 99998775
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.02 Score=56.82 Aligned_cols=96 Identities=10% Similarity=-0.001 Sum_probs=65.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|+++|+++.++|+... +..+-+.+|+... ...++.+++.... .-.|+-=.
T Consensus 97 ~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~--fd~i~~~~~~~~~----------------KP~p~~~~ 156 (243)
T 4g9b_A 97 LPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF--FTFCADASQLKNS----------------KPDPEIFL 156 (243)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG--CSEECCGGGCSSC----------------TTSTHHHH
T ss_pred cccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc--cccccccccccCC----------------CCcHHHHH
Confidence 78999999999999999999997653 4556678888753 3344444443211 11222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEE 415 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~ 415 (703)
...+.+.-..+.+++||| ..+|+.+-++|++ .|+++
T Consensus 157 ~a~~~lg~~p~e~l~VgD-s~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 157 AACAGLGVPPQACIGIED-AQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp HHHHHHTSCGGGEEEEES-SHHHHHHHHHHTCEEEEES
T ss_pred HHHHHcCCChHHEEEEcC-CHHHHHHHHHcCCEEEEEC
Confidence 334444444567999999 9999999999997 35555
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.47 E-value=0.03 Score=57.55 Aligned_cols=95 Identities=14% Similarity=-0.055 Sum_probs=65.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH--------cCCCCCCCCceeeechhhhccCHHHHHHhhccCc
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAV---TEVACE--------LGNFRPESNDIALEGEQFRELNSTERMAKLDSMT 367 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta---~~ia~~--------~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~ 367 (703)
.|++.++++.|+++|+++.++||.....+ ...-+. .|+. ...++.+.+..
T Consensus 190 ~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~--------------- 250 (301)
T 1ltq_A 190 NPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP----LVMQCQREQGD--------------- 250 (301)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC----CSEEEECCTTC---------------
T ss_pred ChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC----chheeeccCCC---------------
Confidence 79999999999999999999999885432 333334 6873 22333222111
Q ss_pred eEEEeChhhHHHHHHHHHhCC-CEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 368 LMGSCLAADKLLLVQTAKEKG-HVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~~g-~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
.+-.|+-|..+.+.+.... ..++|+|| ..+|+.|-++|++- |++.
T Consensus 251 --~kp~p~~~~~~~~~~~~~~~~~~~~vgD-~~~di~~a~~aG~~~~~v~ 297 (301)
T 1ltq_A 251 --TRKDDVVKEEIFWKHIAPHFDVKLAIDD-RTQVVEMWRRIGVECWQVA 297 (301)
T ss_dssp --CSCHHHHHHHHHHHHTTTTCEEEEEEEC-CHHHHHHHHHTTCCEEECS
T ss_pred --CcHHHHHHHHHHHHHhccccceEEEeCC-cHHHHHHHHHcCCeEEEec
Confidence 1234667777777775444 34688999 99999999999985 4443
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.10 E-value=0.067 Score=53.79 Aligned_cols=116 Identities=14% Similarity=0.115 Sum_probs=72.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc---CCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL---GNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~---gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.|++.++++.|+++|+++.++|..+...+..+-+.+ |+... ...++.+ +. -..-.|+
T Consensus 132 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~--fd~i~~~-~~-----------------~~KP~p~ 191 (261)
T 1yns_A 132 FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--VDGHFDT-KI-----------------GHKVESE 191 (261)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG--CSEEECG-GG-----------------CCTTCHH
T ss_pred CcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh--ccEEEec-CC-----------------CCCCCHH
Confidence 899999999999999999999999988777776644 45432 1222222 21 1111122
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcc---hHHhhccchhhccccc
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCT---EMARECSDIVISTVGS 435 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~---~~a~~aad~vl~~~~~ 435 (703)
-=..+.+.+.-..+.++|||| ..+|+.+-++|++- |.+...+. +.....+|.++.++..
T Consensus 192 ~~~~~~~~lg~~p~~~l~VgD-s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~e 254 (261)
T 1yns_A 192 SYRKIADSIGCSTNNILFLTD-VTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSE 254 (261)
T ss_dssp HHHHHHHHHTSCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGG
T ss_pred HHHHHHHHhCcCcccEEEEcC-CHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHH
Confidence 223334444434567999999 99999999999984 44431121 1122346766665543
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=92.60 E-value=0.018 Score=59.21 Aligned_cols=34 Identities=12% Similarity=-0.023 Sum_probs=27.3
Q ss_pred hhcCCccccCcccccc---------CCceeeecccccccccCce
Q 044228 94 INHHAKPQNLSAGATM---------GIASVICIDVTGGLLCNRV 128 (703)
Q Consensus 94 ~k~~ilvk~~~~~e~l---------g~v~~i~~DKTGTLT~n~m 128 (703)
.|.++++|+++.+|++ .++. ++||||||||+...
T Consensus 17 ~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 17 QKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp TSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred hcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 7899999999999873 2333 57799999998654
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=92.24 E-value=0.029 Score=54.68 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=55.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHH----HHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTE----VACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~----ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++.+.++.|+++|+++.++|+.....+.. +.+..+... .+... ..+....|
T Consensus 90 ~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~---------------~~~~~~KP 146 (211)
T 2b82_A 90 KEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP---------------VIFAGDKP 146 (211)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC---------------CEECCCCT
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch---------------hhhcCCCC
Confidence 6789999999999999999999986543322 222222210 00000 01111222
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
.- ..+.+.+++.|- ++++|| ..+|+.+-+.|++- |.+.
T Consensus 147 ~p-~~~~~~~~~~g~-~l~VGD-s~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 147 GQ-NTKSQWLQDKNI-RIFYGD-SDNDITAARDVGARGIRIL 185 (211)
T ss_dssp TC-CCSHHHHHHTTE-EEEEES-SHHHHHHHHHTTCEEEECC
T ss_pred CH-HHHHHHHHHCCC-EEEEEC-CHHHHHHHHHCCCeEEEEe
Confidence 11 123334455554 999999 99999999999985 4443
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=92.13 E-value=0.088 Score=54.14 Aligned_cols=56 Identities=13% Similarity=0.054 Sum_probs=37.3
Q ss_pred CCEEEEEeCCCC-CCHHHHhhCCcceec-CC-Ccc-hHHh---------hccchhhcccccHHHHHh-ccc
Q 044228 388 GHVVAFFGGSST-RDTPALKEADVGITE-EN-KCT-EMAR---------ECSDIVISTVGSLLPILK-LGR 444 (703)
Q Consensus 388 g~~v~~iGD~G~-ND~~al~~AdvGIa~-~~-~~~-~~a~---------~aad~vl~~~~~l~~~i~-~gR 444 (703)
.+.++|||| +. ||+.|.+.|++...+ .. ... +... ..+|+++.++..+.++++ +|+
T Consensus 232 ~~e~l~vGD-~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~~~~~ 301 (306)
T 2oyc_A 232 PARTLMVGD-RLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLEDEGH 301 (306)
T ss_dssp GGGEEEEES-CTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-----
T ss_pred hHHEEEECC-CchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHHhhcc
Confidence 357999999 96 999999999997664 21 111 1211 357888888888887776 344
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=90.15 E-value=0.11 Score=57.32 Aligned_cols=95 Identities=13% Similarity=0.075 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC------CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 299 REEIKSTVEALRNAGVRIILVSED------ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD------~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
.+++.+.++.|+++|+++.++|+- ......... .|+... ...++.+++.... .-
T Consensus 102 ~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~--fd~i~~~~~~~~~----------------KP 161 (555)
T 3i28_A 102 NRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH--FDFLIESCQVGMV----------------KP 161 (555)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT--SSEEEEHHHHTCC----------------TT
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh--eeEEEeccccCCC----------------CC
Confidence 789999999999999999999985 222222211 133322 2345555443211 11
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceec
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE 414 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~ 414 (703)
.|+-=..+.+.+.-..+.+++||| ..||+.+-++|++....
T Consensus 162 ~p~~~~~~~~~lg~~p~~~~~v~D-~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 162 EPQIYKFLLDTLKASPSEVVFLDD-IGANLKPARDLGMVTIL 202 (555)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEES-CHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHcCCChhHEEEECC-cHHHHHHHHHcCCEEEE
Confidence 222223344444434567899999 99999999999997653
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=88.99 E-value=0.25 Score=49.23 Aligned_cols=45 Identities=11% Similarity=0.154 Sum_probs=30.2
Q ss_pred CCEEEEEeCCC-CCCHHHHhhCCcc---eecCCCcch-HHhh---ccchhhcccc
Q 044228 388 GHVVAFFGGSS-TRDTPALKEADVG---ITEENKCTE-MARE---CSDIVISTVG 434 (703)
Q Consensus 388 g~~v~~iGD~G-~ND~~al~~AdvG---Ia~~~~~~~-~a~~---aad~vl~~~~ 434 (703)
.+.++|||| + .||+.+-++|++. +..| .+.. ..++ .+|+++.++.
T Consensus 200 ~~~~~~vGD-~~~~Di~~a~~aG~~~i~v~~g-~~~~~~l~~~~~~~d~v~~~l~ 252 (264)
T 1yv9_A 200 KEQVIMVGD-NYETDIQSGIQNGIDSLLVTSG-FTPKSAVPTLPTPPTYVVDSLD 252 (264)
T ss_dssp GGGEEEEES-CTTTHHHHHHHHTCEEEEETTS-SSCSSSTTTCSSCCSEEESSGG
T ss_pred HHHEEEECC-CcHHHHHHHHHcCCcEEEECCC-CCCHHHHHhcCCCCCEEEecHH
Confidence 457999999 9 6999999999986 3344 2221 2222 4787766443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=86.93 E-value=0.67 Score=41.91 Aligned_cols=40 Identities=25% Similarity=0.068 Sum_probs=33.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE---LLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~---~~ta~~ia~~~gi~~ 338 (703)
-+++.++|++|+++|++++++||++ ...+....++.|+..
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 4688999999999999999999998 556667777888865
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=86.64 E-value=0.31 Score=52.57 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=32.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC------------HHHHHHHHHHcCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE------------LLAVTEVACELGNF 337 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~------------~~ta~~ia~~~gi~ 337 (703)
-+++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 89 ~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 89 YPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred cccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 6999999999999999999999965 22367778888884
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.15 E-value=0.39 Score=46.04 Aligned_cols=89 Identities=13% Similarity=0.014 Sum_probs=62.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
||++.+.++.|++. +++.+.|.-....|..+.+.+++... ...++.+++... .|.
T Consensus 70 RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~--f~~~l~rd~~~~----------------------~k~ 124 (195)
T 2hhl_A 70 RPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV--FRARLFRESCVF----------------------HRG 124 (195)
T ss_dssp CTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC--EEEEECGGGCEE----------------------ETT
T ss_pred CcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc--EEEEEEccccee----------------------cCC
Confidence 99999999999998 99999999999999999999998652 223333332111 122
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 379 LLVQTAKEK---GHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
..++.++.- -..|++++| ..++..+=++|++-|.
T Consensus 125 ~~lK~L~~Lg~~~~~~vivDD-s~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 125 NYVKDLSRLGRELSKVIIVDN-SPASYIFHPENAVPVQ 161 (195)
T ss_dssp EEECCGGGSSSCGGGEEEEES-CGGGGTTCGGGEEECC
T ss_pred ceeeeHhHhCCChhHEEEEEC-CHHHhhhCccCccEEe
Confidence 233333333 346999999 9998887666655543
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=84.07 E-value=0.56 Score=46.84 Aligned_cols=90 Identities=9% Similarity=-0.019 Sum_probs=55.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc--C---------CCCCCCCceeeechhhhccCHHHHHHhhccCc
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL--G---------NFRPESNDIALEGEQFRELNSTERMAKLDSMT 367 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~--g---------i~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~ 367 (703)
.|++.++++. |+++.++|..+...+..+-+.+ | +... -...++. .
T Consensus 127 ~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~--~~~~f~~-~----------------- 182 (253)
T 2g80_A 127 YADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY--IDGYFDI-N----------------- 182 (253)
T ss_dssp CHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG--CCEEECH-H-----------------
T ss_pred CCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhh--cceEEee-e-----------------
Confidence 6777777776 9999999999998888777766 4 2110 0001110 0
Q ss_pred eEEEeCh--hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eec
Q 044228 368 LMGSCLA--ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITE 414 (703)
Q Consensus 368 v~~r~~P--~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~ 414 (703)
+ +...| +-=..+.+.+.-..+.++++|| ..+|+.+=++|++- |.+
T Consensus 183 ~-~g~KP~p~~~~~a~~~lg~~p~~~l~vgD-s~~di~aA~~aG~~~i~v 230 (253)
T 2g80_A 183 T-SGKKTETQSYANILRDIGAKASEVLFLSD-NPLELDAAAGVGIATGLA 230 (253)
T ss_dssp H-HCCTTCHHHHHHHHHHHTCCGGGEEEEES-CHHHHHHHHTTTCEEEEE
T ss_pred c-cCCCCCHHHHHHHHHHcCCCcccEEEEcC-CHHHHHHHHHcCCEEEEE
Confidence 1 01123 2222333444334467999999 99999999999974 344
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=83.66 E-value=0.01 Score=56.75 Aligned_cols=38 Identities=8% Similarity=0.011 Sum_probs=33.3
Q ss_pred cccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCC
Q 044228 299 REEIKSTVEALRNA-GVRIILVSEDELLAVTEVACELGN 336 (703)
Q Consensus 299 r~~~~~~I~~l~~a-gi~v~m~TGD~~~ta~~ia~~~gi 336 (703)
.|++.+.++.|+++ |+++.++|+.....+..+.+.+|+
T Consensus 75 ~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 75 IPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 79999999999999 999999999887777777776665
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=83.37 E-value=0.48 Score=44.73 Aligned_cols=89 Identities=12% Similarity=0.040 Sum_probs=62.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
||++.+.++.+++. +++.+.|.-....|..+.+.++.... ...++.+++.. ..|.
T Consensus 57 rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~--f~~~~~rd~~~----------------------~~k~ 111 (181)
T 2ght_A 57 RPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGA--FRARLFRESCV----------------------FHRG 111 (181)
T ss_dssp CTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCC--EEEEECGGGSE----------------------EETT
T ss_pred CCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCc--EEEEEeccCce----------------------ecCC
Confidence 99999999999998 99999999999999999999988642 22223222211 0122
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 379 LLVQTAKEK---GHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
..++.++.- -..|+++|| ..+|..+=.++++-|.
T Consensus 112 ~~~k~L~~Lg~~~~~~vivdD-s~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 112 NYVKDLSRLGRDLRRVLILDN-SPASYVFHPDNAVPVA 148 (181)
T ss_dssp EEECCGGGTCSCGGGEEEECS-CGGGGTTCTTSBCCCC
T ss_pred cEeccHHHhCCCcceEEEEeC-CHHHhccCcCCEeEec
Confidence 223333332 356999999 9998887666655543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=81.61 E-value=3.8 Score=40.47 Aligned_cols=53 Identities=21% Similarity=0.241 Sum_probs=35.7
Q ss_pred CCCEEEEEeCCCC-CCHHHHhhCCcc-eecCC-Ccc-hHHhh---ccchhhcccccHHHHH
Q 044228 387 KGHVVAFFGGSST-RDTPALKEADVG-ITEEN-KCT-EMARE---CSDIVISTVGSLLPIL 440 (703)
Q Consensus 387 ~g~~v~~iGD~G~-ND~~al~~AdvG-Ia~~~-~~~-~~a~~---aad~vl~~~~~l~~~i 440 (703)
..+.++|||| .. +|+.+-++|++. +.+.. ... +...+ .+|+++.++..+.+.+
T Consensus 201 ~~~~~~~VGD-~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l 260 (263)
T 1zjj_A 201 PGEELWMVGD-RLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYL 260 (263)
T ss_dssp TTCEEEEEES-CTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGG
T ss_pred CcccEEEECC-ChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHH
Confidence 4678999999 95 999999999985 44541 111 12221 4788877777766544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 703 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-15 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 8e-15 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-12 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-09 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-06 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-05 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-04 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 71.4 bits (174), Expect = 4e-15
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 298 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG--NFRPESNDIALEGEQFRELN 355
R+E+ +++ R+AG+R+I+++ D + +G E D A G +F +L
Sbjct: 21 PRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLP 80
Query: 356 STERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEE 415
E+ + K +V+ + + A G D PALK+A++GI
Sbjct: 81 LAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMT-GDGVNDAPALKKAEIGIA-M 138
Query: 416 NKCTEMARECSDIVI--STVGSLLPILKLG 443
T +A+ S++V+ +++ ++ G
Sbjct: 139 GSGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 75.1 bits (184), Expect = 8e-15
Identities = 29/246 (11%), Positives = 80/246 (32%), Gaps = 32/246 (13%)
Query: 441 KLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMM 500
LGR Y N+++F + ++ ++ +T + + +QL+WV + L +
Sbjct: 226 TLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATAL 285
Query: 501 RMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIR- 559
D + + PP + L+ ++ + + +
Sbjct: 286 GFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTY 345
Query: 560 -----------------------------KAMTFNSFTLCQVFNQFDAMCLLKKAVQPVV 590
M + ++ N +++ + ++
Sbjct: 346 HQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPP 405
Query: 591 LKKINFLVVFVIVIAVQVLV--VEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFI 648
I L + +++ L+ V+ + + L+ W + +++ G+ + FI
Sbjct: 406 WVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465
Query: 649 AGSFLD 654
A ++L+
Sbjct: 466 ARNYLE 471
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 66.8 bits (162), Expect = 3e-12
Identities = 38/364 (10%), Positives = 94/364 (25%), Gaps = 44/364 (12%)
Query: 103 LSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGA 162
L +G+ S I + + F + + + + I
Sbjct: 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHL 89
Query: 163 SVLVPEISVWPTTDWLVSWAKSRS--LNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDED 220
++ ++S ++ N+ NL+ + +
Sbjct: 90 IDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYA 149
Query: 221 KIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFAC--- 277
+ A+T L++ + + + +
Sbjct: 150 ALEEF-----ATTELHVS-------------DATLFSLKGALWTLAQEVYQEWYLGSKLY 191
Query: 278 ----GQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACE 333
+ + K ++ + +E+K + L+ AG + + +
Sbjct: 192 EDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFEN 251
Query: 334 LGNFRPESNDIALEGEQFRELNSTERMA----KLDSMTLMGSCLAAD-----KLLLVQTA 384
LG D E + A K + + + + + + Q
Sbjct: 252 LGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDN 311
Query: 385 KEKGHVVAFFGGSSTRDTPALKEADV-------GITEENKCTEMARECSDIVISTVGSLL 437
V G S D + ++ G+ ++ E+ +D VI+ +G L
Sbjct: 312 IVNKDDVFIV-GDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELR 370
Query: 438 PILK 441
+L
Sbjct: 371 GVLD 374
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 53.2 bits (127), Expect = 4e-09
Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 32/133 (24%)
Query: 298 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 357
L+E K V+ L+ G+++ +++ D ++
Sbjct: 22 LKESAKPAVQELKRMGIKVGMITGDN-----------------------------WRSAE 52
Query: 358 ERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENK 417
+L+ ++ L K V+ + VVAF G D PAL +AD+GI +
Sbjct: 53 AISRELNLDLVIAEVLPHQKSEEVK-KLQAKEVVAFVG-DGINDAPALAQADLGIAVGS- 109
Query: 418 CTEMARECSDIVI 430
+++A E DIV+
Sbjct: 110 GSDVAVESGDIVL 122
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 47.9 bits (113), Expect = 1e-06
Identities = 20/137 (14%), Positives = 38/137 (27%), Gaps = 18/137 (13%)
Query: 178 LVSWAKSRSLNVD---QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTI 234
L+ + +V V +S NK + + + ++ G I
Sbjct: 72 LLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV--MKGAPERI 129
Query: 235 LNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFAC-------------GQTE 281
L+ CS + K + FQ ++ G R + F T+
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTD 189
Query: 282 VSEIKENGLHLLALAGL 298
L + L +
Sbjct: 190 ELNFPTEKLCFVGLMSM 206
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 44.6 bits (104), Expect = 2e-05
Identities = 16/156 (10%), Positives = 41/156 (26%), Gaps = 7/156 (4%)
Query: 298 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 357
+RE + V + + ++S V + + D + +
Sbjct: 76 IREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK-----DRIYCNHASFDNDYI 130
Query: 358 ERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENK 417
+ K ++ E + G S D A K +D+ +
Sbjct: 131 HIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIG-DSVTDVEAAKLSDLCFARDYL 189
Query: 418 CTEMARECSD-IVISTVGSLLPILKLGRCAYCNIQK 452
E + + + + ++ + +Q
Sbjct: 190 LNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 44.1 bits (103), Expect = 3e-05
Identities = 23/181 (12%), Positives = 54/181 (29%), Gaps = 22/181 (12%)
Query: 140 VNNDVASEINQA--VLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQ 197
+ ND + + N+ V + + ++ + + + +K N ++
Sbjct: 59 LCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQL 118
Query: 198 YRKL-----SSHNKVCGVLMKINGGDEDKIMHINWS-GTASTILNMCSYYYDSEGKSFEI 251
+K S K V + + + G +++ C+Y +
Sbjct: 119 MKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMT 178
Query: 252 KGEKRRFQKLIKD--MEDSGLRPIAFAC------------GQTEVSEIKENGLHLLALAG 297
K + +IK+ LR +A A + E L + + G
Sbjct: 179 GPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVG 238
Query: 298 L 298
+
Sbjct: 239 M 239
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (95), Expect = 2e-04
Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 8/141 (5%)
Query: 298 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 357
L I+ V L+ V++ L+S V VA +L L+ E
Sbjct: 83 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF 142
Query: 358 ERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TEEN 416
+ S + L++ ++ G D A AD I N
Sbjct: 143 DET-----QPTAESGGKGKVIKLLKEKFHFKKIIMI--GDGATDMEACPPADAFIGFGGN 195
Query: 417 KCTEMARECSDIVISTVGSLL 437
+ ++ + I+ LL
Sbjct: 196 VIRQQVKDNAKWYITDFVELL 216
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 703 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.93 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.92 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.91 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.9 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.85 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.17 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.06 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.02 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.02 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.99 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.99 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.94 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.88 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.84 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.81 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.79 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.74 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.7 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.67 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.66 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.56 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.53 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.18 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.97 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.97 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.9 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.77 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.67 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.58 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.31 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.12 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.96 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.81 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.74 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.69 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.55 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.48 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.45 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.19 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.78 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.63 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.48 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.21 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.19 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.05 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.55 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.18 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.0 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.87 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 93.23 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 92.85 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 92.7 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 91.44 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 90.32 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 88.63 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 85.15 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=1.9e-31 Score=252.46 Aligned_cols=143 Identities=23% Similarity=0.426 Sum_probs=136.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
|++++++|+.||++||++||+|||+..||.++|+++||..++. ....++|++++.+...+..+..++..+|+|++|+|
T Consensus 22 R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~ 101 (168)
T d1wpga2 22 RKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSH 101 (168)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCHHH
T ss_pred chhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccchhH
Confidence 9999999999999999999999999999999999999987632 34578999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhcc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLG 443 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~g 443 (703)
|..+|+.+|+.|++|+|+|| |.||++||++|||||+++ +++++|+++||+++. +|..+.++|+||
T Consensus 102 K~~lv~~l~~~g~~Va~vGD-G~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 102 KSKIVEYLQSYDEITAMTGD-GVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-SGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHhcccceeEEec-CCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999 999999999999999999 799999999999999 899999999987
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=1.4e-26 Score=210.10 Aligned_cols=119 Identities=26% Similarity=0.404 Sum_probs=102.5
Q ss_pred EEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccC
Q 044228 291 HLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSM 366 (703)
Q Consensus 291 ~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~ 366 (703)
+..+.+++ |++++++|+.|+++||+++|+|||+.++|.++|++|||..
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------- 62 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------- 62 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh----------------------------
Confidence 44445666 9999999999999999999999999999999999999976
Q ss_pred ceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 367 TLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 367 ~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
++++++|++|.++++.+|+. ++|+|+|| |.||+|||++|||||+|+ +++++++++||+++. +|+.|+++|+
T Consensus 63 -v~~~~~p~~k~~~v~~~q~~-~~v~~vGD-g~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 -VIAEVLPHQKSEEVKKLQAK-EVVAFVGD-GINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EECSCCHHHHHHHHHHHTTT-SCEEEEEC-SSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred -hccccchhHHHHHHHHHHcC-CEEEEEeC-CCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 99999999999999999875 68999999 999999999999999999 799999999999999 8999998874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.92 E-value=2.4e-31 Score=286.43 Aligned_cols=317 Identities=11% Similarity=-0.005 Sum_probs=217.4
Q ss_pred CccccccCCceeeecccccccccCceEEEEEEECCeecCCCCccccc--HHHHHHHHHHhcccccCCcccCChHHHHHHH
Q 044228 103 LSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVASEIN--QAVLQALERGIGASVLVPEISVWPTTDWLVS 180 (703)
Q Consensus 103 ~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~ 180 (703)
..+.|.||..+++|+|||||+|.|+|++..+..+....... ....+ -+....... |+.....+..++|.+.+++.
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k-~~g~n~~~dl~~~~~~--~~~~~~~~~~~~~~~~~~~~ 106 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLK-SLGLNSNWDMLFIVFS--IHLIDILKKLSHDEIEAFMY 106 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHH-HTTCCCHHHHHHHHHH--HHHHHHHTTSCHHHHHHHHH
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhh-hcCCChhHHHHHHHHH--HHHHHHHhhcCCCcHHHHHH
Confidence 46779999999999999999999999875533221110000 00001 111111111 11111123467888888876
Q ss_pred HHHhCCC---ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHH
Q 044228 181 WAKSRSL---NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRR 257 (703)
Q Consensus 181 ~~~~~~~---~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~ 257 (703)
..+..+. ..++.+.....+||++.+|+|++.....++. +..+.||+++.+.-. ++.+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~----~~~~~~~a~~~~~~~--------------~~~~~~ 168 (380)
T d1qyia_ 107 QDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNI----YAALEEFATTELHVS--------------DATLFS 168 (380)
T ss_dssp CSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHH----HHHHHHHHHHHTTCS--------------CCGGGS
T ss_pred HHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccch----hHhhhhccHhhcCCc--------------HHHHHH
Confidence 5442221 4456677778899999999998766543332 445566666654111 222345
Q ss_pred HHHHHHHHHhcCCceEEEEEeecCc-ccccccCcEEEEEEee------cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Q 044228 258 FQKLIKDMEDSGLRPIAFACGQTEV-SEIKENGLHLLALAGL------REEIKSTVEALRNAGVRIILVSEDELLAVTEV 330 (703)
Q Consensus 258 ~~~~~~~~~~~G~r~l~~A~~~l~~-~~~~e~~l~~lG~~~~------r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~i 330 (703)
+.+.+.+++++|+|++++|++..+. .+....+....|++.. |++++++++.|+++|++++|+|||+..+|..+
T Consensus 169 ~~~~~~~~a~~~~r~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~i 248 (380)
T d1qyia_ 169 LKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVP 248 (380)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHhhhcccccccccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 6677888999999999999987641 2222233344455554 66999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCceeeechhhhccCHH---------HHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCC
Q 044228 331 ACELGNFRPESNDIALEGEQFRELNST---------ERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRD 401 (703)
Q Consensus 331 a~~~gi~~~~~~~~vi~g~~l~~~~~~---------~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND 401 (703)
++++|+...-+...++++++....... .-.+.+..+..++|.+|++|..+++.++..++.|+|+|| |.||
T Consensus 249 l~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD-~~~D 327 (380)
T d1qyia_ 249 FENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGD-SLAD 327 (380)
T ss_dssp HHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEES-SHHH
T ss_pred HHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECC-CHHH
Confidence 999999865445567777664321110 001122233468899999999999999999999999999 9999
Q ss_pred HHHHhhCC---cceecCCCcchHHhh----ccchhhcccccHHHHHh
Q 044228 402 TPALKEAD---VGITEENKCTEMARE----CSDIVISTVGSLLPILK 441 (703)
Q Consensus 402 ~~al~~Ad---vGIa~~~~~~~~a~~----aad~vl~~~~~l~~~i~ 441 (703)
++|.|+|| |||+||..+++..++ .||+++.++..+.+++.
T Consensus 328 ~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~ 374 (380)
T d1qyia_ 328 LLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374 (380)
T ss_dssp HHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHS
T ss_pred HHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHH
Confidence 99999999 999999777766544 79999999888887764
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=9e-24 Score=233.24 Aligned_cols=212 Identities=13% Similarity=0.192 Sum_probs=187.1
Q ss_pred ccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCc
Q 044228 442 LGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSL 521 (703)
Q Consensus 442 ~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l 521 (703)
.||.++.|++|.+.|.++.|+..+...+++.++..+.|+++.|++|+|+++|++|++++++|+|++++|++||+++++++
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~l 306 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPL 306 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCS
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccc
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc------------------------------ccccccchhhHHHHHHH
Q 044228 522 LDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGM------------------------------NRDIRKAMTFNSFTLCQ 571 (703)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~t~~f~~~v~~~ 571 (703)
+++.++..++.++++.++..+..+++....... ...+.+|+.|++++++|
T Consensus 307 i~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q 386 (472)
T d1wpga4 307 ISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIE 386 (472)
T ss_dssp SCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHH
Confidence 999999999999999888777666544322110 12346799999999999
Q ss_pred HHHhhheeecccccccccccchHHHHHHHHHHHHHHHHHHH--HHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 044228 572 VFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVE--FATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIA 649 (703)
Q Consensus 572 ~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~ 649 (703)
+++.+++|+.+...+.++.++|+++++++++++++++++++ +++.+|++.++++.+|++++.++++.+++++++|++.
T Consensus 387 ~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~ 466 (472)
T d1wpga4 387 MCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIA 466 (472)
T ss_dssp HHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999865444445788999999999998988887754 5788999999999999999999999999999999998
Q ss_pred hhhc
Q 044228 650 GSFL 653 (703)
Q Consensus 650 r~~~ 653 (703)
|+|.
T Consensus 467 R~~~ 470 (472)
T d1wpga4 467 RNYL 470 (472)
T ss_dssp HTTT
T ss_pred hcCC
Confidence 8774
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.90 E-value=2.2e-23 Score=205.59 Aligned_cols=168 Identities=14% Similarity=0.131 Sum_probs=127.0
Q ss_pred eEEEEEEECCeecCCCCc--------ccccHHHHHHHHH-Hhccc--cc---------CCcccCChHHHHHHHHHHhCCC
Q 044228 128 VDVSKFCIGEKDVNNDVA--------SEINQAVLQALER-GIGAS--VL---------VPEISVWPTTDWLVSWAKSRSL 187 (703)
Q Consensus 128 m~v~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~-~~~~~--~~---------~~~~~~~p~e~Al~~~~~~~~~ 187 (703)
|+|.++|.++..+..+.. ...++....++.. ++|++ +. .....|+|+|.||++++.+.|.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 899999998876643321 1223344444433 34422 22 1235899999999999997766
Q ss_pred ---ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHH
Q 044228 188 ---NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIK 263 (703)
Q Consensus 188 ---~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~ 263 (703)
..++.++++..+||+|.+|+|+++++.+++++. +++|+|||||.|+++|++++. +|+..++ ++.++.+.+.++
T Consensus 82 ~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~--~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~ 158 (214)
T d1q3ia_ 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQS--HVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYL 158 (214)
T ss_dssp CHHHHHHTSCEEEEEC------CEEEEEECSSCTTS--EEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHH
T ss_pred CHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCc--eeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHH
Confidence 556789999999999999999999997643221 889999999999999999886 7889999 999999999999
Q ss_pred HHHhcCCceEEEEEeecC-------------cccccccCcEEEEEEee
Q 044228 264 DMEDSGLRPIAFACGQTE-------------VSEIKENGLHLLALAGL 298 (703)
Q Consensus 264 ~~~~~G~r~l~~A~~~l~-------------~~~~~e~~l~~lG~~~~ 298 (703)
+|+++|+|||++|||.++ ..+..|++|+|+|+++|
T Consensus 159 ~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi 206 (214)
T d1q3ia_ 159 ELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSM 206 (214)
T ss_dssp HHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEE
T ss_pred HHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEE
Confidence 999999999999999986 23455889999999999
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.85 E-value=3.8e-21 Score=192.81 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=131.9
Q ss_pred eeecccccccccCceEEEEEEECCeecCCCC---------cccccHHHHHHHHHH-hccc--cc------CCcccCChHH
Q 044228 114 VICIDVTGGLLCNRVDVSKFCIGEKDVNNDV---------ASEINQAVLQALERG-IGAS--VL------VPEISVWPTT 175 (703)
Q Consensus 114 ~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~-~~~~--~~------~~~~~~~p~e 175 (703)
..+.||++..| +...++.+.+..|..++ .....+.+.+++..+ +|+. +. .....|+|+|
T Consensus 6 m~v~~~~~~~~---~~~~~~~VtG~~y~p~G~i~~~~~~v~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE 82 (239)
T d1wpga3 6 MFIIDKVDGDF---CSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATE 82 (239)
T ss_dssp EEEEEEEETTE---EEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHH
T ss_pred EEEEeeecCCc---ccceEEEEEeEeeCCceEEEECCcCcCccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCc
Confidence 45677764443 34445555554444322 112334555555443 4533 22 1235799999
Q ss_pred HHHHHHHHhCCCc-------------------cccccceEEEecCCCCCCeEEEEEEeCCCCc-ceeEEEEEeCChHHHH
Q 044228 176 DWLVSWAKSRSLN-------------------VDQNLSIVQYRKLSSHNKVCGVLMKINGGDE-DKIMHINWSGTASTIL 235 (703)
Q Consensus 176 ~Al~~~~~~~~~~-------------------~~~~~~~l~~~~F~s~~k~msviv~~~~~~~-~~~~~l~~KGa~e~i~ 235 (703)
.||+.++.+.|.. .++.++++..+||+|+||||+|+++.+++.. ...+++|+|||||.|+
T Consensus 83 ~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL 162 (239)
T d1wpga3 83 TALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVI 162 (239)
T ss_dssp HHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHH
T ss_pred HHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHH
Confidence 9999999988761 1356889999999999999999999876421 0116899999999999
Q ss_pred hhcccccccCCceecc-hHHHHHHHHHHHHH--HhcCCceEEEEEeecC------------cccccccCcEEEEEEee
Q 044228 236 NMCSYYYDSEGKSFEI-KGEKRRFQKLIKDM--EDSGLRPIAFACGQTE------------VSEIKENGLHLLALAGL 298 (703)
Q Consensus 236 ~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~--~~~G~r~l~~A~~~l~------------~~~~~e~~l~~lG~~~~ 298 (703)
++|+.++. +|...|+ ++.++.+.+..+++ +++|+|||++|||+++ ..+++|++|+|+|++||
T Consensus 163 ~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 163 DRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred Hhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 99998876 6777899 99999999999987 6799999999999987 13457899999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.17 E-value=3.3e-11 Score=117.53 Aligned_cols=142 Identities=15% Similarity=0.142 Sum_probs=99.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeeechh----------------h--------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQ----------------F-------- 351 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~g~~----------------l-------- 351 (703)
.+++.++|++|+++|++++++||++...+..+++.+++..+ .....+..... +
T Consensus 21 ~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T d1wr8a_ 21 HEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNAR 100 (230)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccccc
Confidence 57789999999999999999999999999999999998754 00000000000 0
Q ss_pred ----------------hccCHHHHHHhhccCc---------eEEE--eChhhHHHHHHHHHhC----CCEEEEEeCCCCC
Q 044228 352 ----------------RELNSTERMAKLDSMT---------LMGS--CLAADKLLLVQTAKEK----GHVVAFFGGSSTR 400 (703)
Q Consensus 352 ----------------~~~~~~~~~~~~~~~~---------v~~r--~~P~~K~~iv~~lq~~----g~~v~~iGD~G~N 400 (703)
.....+.+.++..+.. .... .....|...++.+.++ .+.|+++|| |.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD-~~N 179 (230)
T d1wr8a_ 101 TSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD-GEN 179 (230)
T ss_dssp BCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC-SGG
T ss_pred ceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeec-Ccc
Confidence 0001122333222211 1122 2345788877776553 456999999 999
Q ss_pred CHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhc
Q 044228 401 DTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 401 D~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
|++|++.||+||||+ ++.+.+++.||+++. +..++.+++.+
T Consensus 180 Di~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~ 222 (230)
T d1wr8a_ 180 DLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 222 (230)
T ss_dssp GHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 999999999999999 799999999999998 66777777654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.06 E-value=1.5e-10 Score=113.24 Aligned_cols=142 Identities=18% Similarity=0.216 Sum_probs=99.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeeechhh-hc-c-------------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQF-RE-L------------------- 354 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~g~~l-~~-~------------------- 354 (703)
.+++.+++++|++.|++++++||++...+..++...|+..+ .....+.+.+.. .. .
T Consensus 22 ~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (225)
T d1l6ra_ 22 STKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMR 101 (225)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCB
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhcCcc
Confidence 57889999999999999999999999999999999998654 000011110000 00 0
Q ss_pred -------------------CHHHHHHhhcc--Cce-----EEEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCCCCH
Q 044228 355 -------------------NSTERMAKLDS--MTL-----MGSCLA--ADKLLLVQTAKEK----GHVVAFFGGSSTRDT 402 (703)
Q Consensus 355 -------------------~~~~~~~~~~~--~~v-----~~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ND~ 402 (703)
..+.+.+.... ..+ .....| ..|...++.+.++ ...|+++|| |.||.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GD-s~nD~ 180 (225)
T d1l6ra_ 102 SILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD-SNNDM 180 (225)
T ss_dssp CCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC-SGGGH
T ss_pred eeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecC-CcchH
Confidence 00112111111 111 222333 4788888877653 345888999 99999
Q ss_pred HHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhc
Q 044228 403 PALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 403 ~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
+|++.||+||||+ ++.+.+++.||+++. +..++.+++++
T Consensus 181 ~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 181 PMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp HHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999 799999999999987 77888888763
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=1.8e-10 Score=115.62 Aligned_cols=69 Identities=14% Similarity=0.197 Sum_probs=57.0
Q ss_pred EeChh--hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 371 SCLAA--DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 371 r~~P~--~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
..+|. +|...++.+.+. ...++++|| |.||.+||+.|+.|+||+ ++.+.+++.||+++. +-.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD-~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGD-QENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeC-cHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34454 599888888764 345899999 999999999999999999 899999999999987 4466777665
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.02 E-value=2.1e-10 Score=115.96 Aligned_cols=68 Identities=18% Similarity=0.155 Sum_probs=57.6
Q ss_pred eChh--hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 372 CLAA--DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 372 ~~P~--~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.+|. .|..-++.+.+. .+.|+++|| |.||.+||+.|+.|+||+ ++.+.+++.||+++. +-.++.++|+
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD-~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGD-SLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEES-SGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeC-CHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4443 799888888764 246999999 999999999999999999 799999999999988 6667777775
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.99 E-value=3.2e-10 Score=106.44 Aligned_cols=108 Identities=14% Similarity=0.211 Sum_probs=87.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
+++ ..|+.|++.|+.+.++||++...+...++++++.. ++.. ..+|.
T Consensus 36 ~Dg--~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-----------------------------~~~~--~~~K~ 82 (177)
T d1k1ea_ 36 RDG--LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-----------------------------FFLG--KLEKE 82 (177)
T ss_dssp HHH--HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-----------------------------EEES--CSCHH
T ss_pred cch--HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-----------------------------cccc--cccHH
Confidence 444 37999999999999999999999999999999874 3433 34555
Q ss_pred HHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--c----cccHHHHHh
Q 044228 379 LLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--T----VGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~----~~~l~~~i~ 441 (703)
..++.+.++ ...|+++|| |.||.+||+.|++|+|++ ++.+.+++.||+|+. . .+.+.+.|.
T Consensus 83 ~~l~~~~~~~~i~~~~v~~vGD-d~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il 153 (177)
T d1k1ea_ 83 TACFDLMKQAGVTAEQTAYIGD-DSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMIL 153 (177)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcceeEEecC-CccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHHHHH
Confidence 555544432 468999999 999999999999999999 799999999999998 2 555556554
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=2e-10 Score=111.97 Aligned_cols=125 Identities=20% Similarity=0.164 Sum_probs=92.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--Cce--eeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDI--ALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~--vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
+|++.+.|+.||++|++++++||.....+..+++.+|+..... +.. ..+|...... .......+
T Consensus 84 ~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~------------~~~p~~~~ 151 (217)
T d1nnla_ 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD------------ETQPTAES 151 (217)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC------------TTSGGGST
T ss_pred CHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccce------------eeeeeecc
Confidence 8999999999999999999999999999999999999974200 000 0011100000 00011346
Q ss_pred hhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhCCcceecCCC-cchHHhhccchhhcccccH
Q 044228 375 ADKLLLVQTAKEK--GHVVAFFGGSSTRDTPALKEADVGITEENK-CTEMARECSDIVISTVGSL 436 (703)
Q Consensus 375 ~~K~~iv~~lq~~--g~~v~~iGD~G~ND~~al~~AdvGIa~~~~-~~~~a~~aad~vl~~~~~l 436 (703)
..|.++++.++++ ...+.++|| |.||++|++.||+|||++.+ .....++.+|+++.+|..+
T Consensus 152 ~~K~~~v~~~~~~~~~~~~~~vGD-s~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 152 GGKGKVIKLLKEKFHFKKIIMIGD-GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEES-SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred chHHHHHHHHHhccCccccEEEEe-CHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 7899999999864 346899999 99999999999999999743 3456667889888776654
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.94 E-value=4.2e-10 Score=112.76 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=58.5
Q ss_pred EEeChh--hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 370 GSCLAA--DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 370 ~r~~P~--~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
-..+|. .|..-++.+.+. .+.|+++|| |.||.+||+.|+.|+||+ ++.+.+|+.||+++. +-.++.+.|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD-~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGD-SGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcC-CcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 345554 599888888764 246899999 999999999999999999 899999999999988 6667777775
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.88 E-value=2.6e-09 Score=101.63 Aligned_cols=127 Identities=18% Similarity=0.067 Sum_probs=94.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.++....++.+ +.+.+...+|+.............++............... ........+..+.
T Consensus 71 ~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------------~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 71 LEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR--------------VVGYQLRQKDPKR 135 (206)
T ss_dssp CTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC--------------EEEEECCSSSHHH
T ss_pred cchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccc--------------cccccccchhhHH
Confidence 55566666554 57899999999999999999999988753111111111100 0123344566677
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc-ccccHHHHHhc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-TVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~-~~~~l~~~i~~ 442 (703)
..++.++...+.|+|+|| |.||++||+.||+||||+ ...+..++++|+++. +...+.+.|..
T Consensus 136 ~~~~~~~i~~~eviaiGD-g~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 136 QSVIAFKSLYYRVIAAGD-SYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHTTCEEEEEEC-SSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred HHHHHhcccccceEEecC-CccCHHHHHhCCccEEEC-CCHHHHHhCCCceeecCHHHHHHHHHH
Confidence 788888888999999999 999999999999999996 677778888899887 89999987764
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.84 E-value=4.7e-10 Score=122.21 Aligned_cols=74 Identities=23% Similarity=0.251 Sum_probs=69.0
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccc--cccccCceEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVT--GGLLCNRVDV 130 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKT--GTLT~n~m~v 130 (703)
..+.+.+..+++++++++|+|||+++++++++|++|| +|+|++||+++++|++|+..+.|+||| +|||.|.+++
T Consensus 175 ~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rm-ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 175 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM-AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp SCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH-HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH-HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 4667789999999999999999999999999999999 999999999999999999999999998 9999886543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.81 E-value=1.1e-09 Score=106.56 Aligned_cols=141 Identities=11% Similarity=0.052 Sum_probs=100.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-CCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
+|++.+.++.|++.|+++.++|+.....+..+.+++|+...- .+...+++....... ........+...|+.|
T Consensus 77 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~------~~~~~~~~~~~k~~~~ 150 (226)
T d2feaa1 77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW------PHSCKGTCSNQCGCCK 150 (226)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEEC------TTCCCTTCCSCCSSCH
T ss_pred hHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceecc------ccccccccccCCHHHH
Confidence 899999999999999999999999999999999999876520 001111111110000 0000114456788999
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhc-cchhh-cccccHHHHHhccchhh
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC-SDIVI-STVGSLLPILKLGRCAY 447 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~a-ad~vl-~~~~~l~~~i~~gR~~~ 447 (703)
..+++.++..++.|+++|| +.||++|+++||+++|++ ...+.+++. .++.. .+|+.+...+.+-....
T Consensus 151 ~~~~~~~~~~~~~~i~iGD-s~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~ 220 (226)
T d2feaa1 151 PSVIHELSEPNQYIIMIGD-SVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQDFYEIRKEIENVKEVQ 220 (226)
T ss_dssp HHHHHHHCCTTCEEEEEEC-CGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHH
T ss_pred HHHHHHhcCCCceEEEEeC-chhhHHHHHHCCEEEEec-chHHHHHHcCCCeeecCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999998 455544433 33333 38888887776544333
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.79 E-value=1.3e-09 Score=108.79 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=58.4
Q ss_pred EeCh--hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhc
Q 044228 371 SCLA--ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 371 r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
...| ..|...++.+.++ ...++++|| |.||++||+.|+.|+||+ ++.+.+++.||+++. +-.++.++|++
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD-~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGD-GGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHhccccHhheeEecC-CcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 3444 3688888888663 456889999 999999999999999999 799999999999877 66788888863
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.74 E-value=5.1e-09 Score=105.05 Aligned_cols=64 Identities=17% Similarity=0.210 Sum_probs=51.1
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccc-cHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVG-SLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~-~l~~~i~ 441 (703)
.|...++.+.+. ...|+++|| |.||.+||+.||.|++|+ ++.+.+++.||+++. +-. ++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD-~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGD-AENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecC-ChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 566666666543 357999999 999999999999999999 899999999999986 333 3555554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.70 E-value=1.1e-08 Score=102.34 Aligned_cols=69 Identities=23% Similarity=0.313 Sum_probs=57.3
Q ss_pred EeChh--hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 371 SCLAA--DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 371 r~~P~--~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.++|. .|...++.+.+. ...|+++|| |.||.+||+.||+|+||+ ++.+.+++.||+++. +-.++.++|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD-~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGD-NENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEEC-SHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcC-CcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 34553 588888777654 245888999 999999999999999999 899999999999988 6677887775
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.67 E-value=2.1e-08 Score=97.92 Aligned_cols=41 Identities=24% Similarity=0.262 Sum_probs=37.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
.+.++++|++|+++|++++++||++...+..+.+++++..+
T Consensus 19 ~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~ 59 (243)
T d1wzca1 19 PDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETP 59 (243)
T ss_dssp SGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccccc
Confidence 46688999999999999999999999999999999998764
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.66 E-value=1.5e-08 Score=96.46 Aligned_cols=125 Identities=18% Similarity=0.146 Sum_probs=88.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE--eChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS--CLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r--~~P~~ 376 (703)
.+++.+.++.++..|..+.++||.....+....++.+.... ....+..+..... ..... ..+..
T Consensus 77 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------------~~~~~~~~~~~~ 142 (210)
T d1j97a_ 77 TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA--FANRLIVKDGKLT------------GDVEGEVLKENA 142 (210)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEE--EEEEEEEETTEEE------------EEEECSSCSTTH
T ss_pred hhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhh--hhhhhcccccccc------------cccccccccccc
Confidence 67889999999999999999999999999999998887652 1111111110000 00000 11223
Q ss_pred HHHHHHH----HHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHH
Q 044228 377 KLLLVQT----AKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPIL 440 (703)
Q Consensus 377 K~~iv~~----lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i 440 (703)
|...++. ++-..+.++++|| |.||++|++.||+|||| ++.+..++.||+++. ++..|.+.|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~i~iGD-s~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 143 KGEILEKIAKIEGINLEDTVAVGD-GANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEES-SGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccchhhhHHHHhcccccceEEecC-CcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 3333333 3333557899999 99999999999999999 478899999999998 778887765
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.56 E-value=4.9e-08 Score=95.87 Aligned_cols=138 Identities=11% Similarity=0.069 Sum_probs=90.9
Q ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----CCceeeechhhhc---------cC-------------
Q 044228 303 KSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGEQFRE---------LN------------- 355 (703)
Q Consensus 303 ~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-----~~~~vi~g~~l~~---------~~------------- 355 (703)
.+.+.++++.|+.+.++||++...+..+.+++++..++ ....+...+.... ..
T Consensus 24 ~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (244)
T d1s2oa1 24 LQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEA 103 (244)
T ss_dssp HHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTCTT
T ss_pred HHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhccc
Confidence 34455668889999999999999999999999987651 1111222111100 00
Q ss_pred --------------------------HHHHHHhhccC----c------eEEEe--ChhhHHHHHHHHHhC-C---CEEEE
Q 044228 356 --------------------------STERMAKLDSM----T------LMGSC--LAADKLLLVQTAKEK-G---HVVAF 393 (703)
Q Consensus 356 --------------------------~~~~~~~~~~~----~------v~~r~--~P~~K~~iv~~lq~~-g---~~v~~ 393 (703)
.+++.+..... . -+... ....|...++.+.+. | ..|++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~ 183 (244)
T d1s2oa1 104 LKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLV 183 (244)
T ss_dssp EEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhEEE
Confidence 01222222111 0 11222 335699988888775 2 45888
Q ss_pred EeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc---------ccccHHHHHhc
Q 044228 394 FGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS---------TVGSLLPILKL 442 (703)
Q Consensus 394 iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~---------~~~~l~~~i~~ 442 (703)
+|| |.||.+||+.||.|++|+ |+.+.+++.||.+.. +..++.+++++
T Consensus 184 ~GD-~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 184 CGD-SGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEC-SGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EcC-CCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 999 999999999999999999 799999999985432 45566666653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=1.8e-07 Score=90.25 Aligned_cols=40 Identities=23% Similarity=0.187 Sum_probs=37.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
-+.+.+++++|+++|+.++++||++...+..+.+++|+..
T Consensus 23 ~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 23 WQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 5678999999999999999999999999999999999864
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.18 E-value=2.6e-06 Score=75.57 Aligned_cols=128 Identities=14% Similarity=0.205 Sum_probs=85.4
Q ss_pred EEEEEECCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCC--ccccccceEEEecCCCCCCe
Q 044228 130 VSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSL--NVDQNLSIVQYRKLSSHNKV 207 (703)
Q Consensus 130 v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~--~~~~~~~~l~~~~F~s~~k~ 207 (703)
+..+.+.+..-. .+++.+.+.+ |..|.||+.+||+++|++.+. ............+|+...+.
T Consensus 4 ~td~ip~~G~~~--------~ell~~AA~a-------E~~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (136)
T d2a29a1 4 ASEFIPAQGVDE--------KTLADAAQLA-------SLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 68 (136)
T ss_dssp EEEEEECTTCCH--------HHHHHHHHHH-------HHTCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTE
T ss_pred cceEEeCCCCCH--------HHHHHHHHHH-------hCCCCchHHHHHHHHHHHhcCCCccccccccccccccccccce
Confidence 566666543211 2566666655 678999999999999996643 11223344456677777755
Q ss_pred EEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccc
Q 044228 208 CGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKE 287 (703)
Q Consensus 208 msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e 287 (703)
.++.+ +|. .+.+|++..+.+.... .|. ..++++.+.+++++++|.+++.+|.++
T Consensus 69 ~g~~~---~g~------~v~~G~~~~~~~~~~~----~g~-----~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------- 122 (136)
T d2a29a1 69 SGINI---DNR------MIRKGSVDAIRRHVEA----NGG-----HFPTDVDQKVDQVARQGATPLVVVEGS-------- 122 (136)
T ss_dssp EEEEE---TTE------EEEEECHHHHHHHHHH----HTC-----CCCHHHHHHHHHHHHTTSEEEEEEETT--------
T ss_pred EEEEE---CCE------EEEecHHHHHHHHHHH----cCC-----CCcHHHHHHHHHHHHCCCeEEEEEECC--------
Confidence 55433 343 3356999887654322 111 123678888999999999999999998
Q ss_pred cCcEEEEEEeeccc
Q 044228 288 NGLHLLALAGLREE 301 (703)
Q Consensus 288 ~~l~~lG~~~~r~~ 301 (703)
+++|++++.+.
T Consensus 123 ---~~~G~i~l~D~ 133 (136)
T d2a29a1 123 ---RVLGVIALKDI 133 (136)
T ss_dssp ---EEEEEEEEEES
T ss_pred ---EEEEEEEEEee
Confidence 99999998443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.97 E-value=1.9e-06 Score=82.99 Aligned_cols=55 Identities=18% Similarity=0.340 Sum_probs=47.2
Q ss_pred hhHHHHHHHHHhC-CCEEEEEeCCC----CCCHHHHhhCC-cceecCCCcchHHhhccchhhc
Q 044228 375 ADKLLLVQTAKEK-GHVVAFFGGSS----TRDTPALKEAD-VGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 375 ~~K~~iv~~lq~~-g~~v~~iGD~G----~ND~~al~~Ad-vGIa~~~~~~~~a~~aad~vl~ 431 (703)
-.|...++.|.+. ...|+++|| + .||.+||++|+ .|+||+ ++.+.++..+|+++.
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD-~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGN-ETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 244 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEES-CCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred ccHHHHHHHHhcCChhhEEEEcC-CCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcCC
Confidence 4688888888664 568999999 6 49999999997 699999 899999999999863
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.97 E-value=1.3e-05 Score=68.54 Aligned_cols=99 Identities=12% Similarity=0.161 Sum_probs=71.6
Q ss_pred HHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCC
Q 044228 151 AVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGT 230 (703)
Q Consensus 151 ~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa 230 (703)
+++.++... |..+.||+++|+++++++.+.... ....|.... +.|+.. +. +++ |+
T Consensus 14 elL~~aasl-------E~~S~HPlA~AIv~~a~~~~~~~~------~~~~~~~~~-G~Gi~g-----~~---v~v---G~ 68 (113)
T d2b8ea2 14 ELLRLAAIA-------ERRSEHPIAEAIVKKALEHGIELG------EPEKVEVIA-GEGVVA-----DG---ILV---GN 68 (113)
T ss_dssp HHHHHHHHH-------TTTCCSHHHHHHHHHHHTTTCCCC------CCSCEEEET-TTEEEE-----TT---EEE---EC
T ss_pred HHHHHHHHH-------HCcCCCchHHHHHHHHHHhcCCCC------ccccceeec-cceEEe-----EE---EEE---Cc
Confidence 677777666 889999999999999998765211 112233333 446543 22 766 99
Q ss_pred hHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee
Q 044228 231 ASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL 298 (703)
Q Consensus 231 ~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~ 298 (703)
++++.+..... ++.+.+.++.+..+|.++++++.++ .++|++++
T Consensus 69 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~G~T~v~va~d~-----------~~~G~ial 112 (113)
T d2b8ea2 69 KRLMEDFGVAV-------------SNEVELALEKLEREAKTAVIVARNG-----------RVEGIIAV 112 (113)
T ss_dssp HHHHHHTTCCC-------------CHHHHHHHHHHHTTTCEEEEEEETT-----------EEEEEEEE
T ss_pred HHHHHhcCCCC-------------CHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEEE
Confidence 99986643221 3567788999999999999999999 99999875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.90 E-value=2.4e-06 Score=81.79 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=46.5
Q ss_pred EeCh--hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 371 SCLA--ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 371 r~~P--~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
...| ..|...++.+.++. .++++|| +.||.+||+.|+-|+||+ +|.. +.+|++.+.+...+.++++
T Consensus 152 di~p~g~~Kg~al~~l~~~~-~~i~~GD-s~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~~~~ev~~~l~ 219 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGER-PAIIAGD-DATDEAAFEANDDALTIK-VGEG--ETHAKFHVADYIEMRKILK 219 (229)
T ss_dssp EEECTTCCHHHHHHHHHTTS-CEEEEES-SHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEESSHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHhccc-cceeecC-CCChHHHHhccCCeEEEE-eCCC--CccCeEEcCCHHHHHHHHH
Confidence 4444 46999999998775 5678899 999999999997776654 2321 4578888874444444443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.77 E-value=1.6e-05 Score=76.28 Aligned_cols=123 Identities=14% Similarity=0.086 Sum_probs=83.7
Q ss_pred cccHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe-Chhh
Q 044228 299 REEIKSTVEALRNAG-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC-LAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~ag-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~-~P~~ 376 (703)
-||+.++++.|++.| +++.++|+.....+..+.+..|+... ...++.+++.. .+- .|.-
T Consensus 93 ~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~-----------------~~k~~p~~ 153 (228)
T d2hcfa1 93 LEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY--FPFGAFADDAL-----------------DRNELPHI 153 (228)
T ss_dssp CTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT--CSCEECTTTCS-----------------SGGGHHHH
T ss_pred cCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccc--ccccccccccc-----------------cccchhHH
Confidence 689999999999987 89999999999999999999999863 22233332211 111 1111
Q ss_pred HHHHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCc---ceecCCCcch-HHhhccchhhcccccHHHHHh
Q 044228 377 KLLLVQTAKEK---GHVVAFFGGSSTRDTPALKEADV---GITEENKCTE-MARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~---g~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~~~-~a~~aad~vl~~~~~l~~~i~ 441 (703)
-...++.+... .+.++|||| +.+|+.|-+.|++ ||+-|....+ ..+..+|+++.+++.+.++|.
T Consensus 154 ~~~~~~~~~~~~~~p~~~l~VGD-~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~ 224 (228)
T d2hcfa1 154 ALERARRMTGANYSPSQIVIIGD-TEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHCCCCCGGGEEEEES-SHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHH
T ss_pred HHHHhhhhcccCCChhHheeecC-ChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHH
Confidence 12223333222 357999999 9999999999995 4444432222 244468999888888888775
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.67 E-value=1.8e-05 Score=75.20 Aligned_cols=123 Identities=19% Similarity=0.158 Sum_probs=87.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++++.++.|++.|+++.++|+.....+..+.+++|+... ...++.+.+.. ...-.|+--.
T Consensus 97 ~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~----------------~~kp~p~~~~ 158 (224)
T d2hsza1 97 YPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSLP----------------EIKPHPAPFY 158 (224)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTSS----------------SCTTSSHHHH
T ss_pred HHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhh--ccccccccccc----------------cccccchhhH
Confidence 78999999999999999999999999999999999998753 12222222111 1112334444
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecC--CC-cchHHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEE--NK-CTEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~--~~-~~~~a~~aad~vl~~~~~l~~~i 440 (703)
.+.+.++-....++|+|| ..+|+.+-+.|++ .|.+. .+ ..+.....+|+++.+++.+.+++
T Consensus 159 ~~~~~~~~~~~~~~~igD-~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 159 YLCGKFGLYPKQILFVGD-SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223 (224)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred HHHHHhhhhhhccchhcC-cHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence 455555555678999999 9999999999997 34443 11 22344456888888888887765
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.58 E-value=3.9e-05 Score=72.75 Aligned_cols=119 Identities=13% Similarity=0.053 Sum_probs=82.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|+++.++|+.....+..+.+..|+... -..++.+++.. .+.-.|+-=.
T Consensus 90 ~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~--F~~i~~~~~~~----------------~~Kp~~~~~~ 151 (218)
T d1te2a_ 90 LPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP----------------YSKPHPQVYL 151 (218)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS----------------CCTTSTHHHH
T ss_pred cchHHHHHHHhhhcccccccccccccccccccccccccccc--ccccccccccc----------------cchhhHHHHH
Confidence 68999999999999999999999999999999999999753 23344443321 1112233334
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCC--CcchHHhhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEEN--KCTEMARECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~--~~~~~a~~aad~vl~~~~~l 436 (703)
.+++.+.-..+.++++|| +.+|+.+-+.|++. |++.. ...+.....||+++.++..+
T Consensus 152 ~~~~~l~~~~~~~l~igD-~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 152 DCAAKLGVDPLTCVALED-SVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp HHHHHHTSCGGGEEEEES-SHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred HHHHHcCCCchhcEEEee-CHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence 455555545678999999 99999999999974 34421 11222234577777766644
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.31 E-value=0.00014 Score=70.74 Aligned_cols=124 Identities=13% Similarity=0.062 Sum_probs=85.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.++++.|++.|+++.++||.+...+..+-+..|+.... ...++.+++.. ...-.|+.=.
T Consensus 101 ~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~~----------------~~KP~p~~~~ 163 (257)
T d1swva_ 101 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDVP----------------AGRPYPWMCY 163 (257)
T ss_dssp CTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGSS----------------CCTTSSHHHH
T ss_pred CCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc-ccccccccccc----------------ccccChHHHH
Confidence 799999999999999999999999999999999999886521 12334443321 1112333344
Q ss_pred HHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcch---------------------------HHhhccchh
Q 044228 379 LLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVG-ITEENKCTE---------------------------MARECSDIV 429 (703)
Q Consensus 379 ~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~---------------------------~a~~aad~v 429 (703)
...+.+.-. .+.++|||| ..+|+.+=+.|++- |++. .|.. ..+..||++
T Consensus 164 ~~~~~l~~~p~~~~v~VgD-s~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~v 241 (257)
T d1swva_ 164 KNAMELGVYPMNHMIKVGD-TVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFT 241 (257)
T ss_dssp HHHHHHTCCSGGGEEEEES-SHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHhCCCCcceEEEEeC-ChhhHHHHHHCCCEEEEEc-cCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEE
Confidence 455555432 367999999 99999999999973 4443 1210 111238999
Q ss_pred hcccccHHHHHh
Q 044228 430 ISTVGSLLPILK 441 (703)
Q Consensus 430 l~~~~~l~~~i~ 441 (703)
+.++..|+.+|.
T Consensus 242 i~~l~eL~~ii~ 253 (257)
T d1swva_ 242 IETMQELESVME 253 (257)
T ss_dssp ESSGGGHHHHHH
T ss_pred ECCHHHHHHHHH
Confidence 998888888775
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.12 E-value=0.00011 Score=69.03 Aligned_cols=120 Identities=12% Similarity=0.044 Sum_probs=81.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.+++.+ ++.++|+.....+..+.+..|+... ...++.+.+. ....|+-..
T Consensus 86 ~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~--fd~v~~~~~~------------------~~~~p~~~~ 144 (210)
T d2ah5a1 86 FPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHF--FDGIYGSSPE------------------APHKADVIH 144 (210)
T ss_dssp CTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECSS------------------CCSHHHHHH
T ss_pred hhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccc--cccccccccc------------------ccccccccc
Confidence 789999999998775 8899999999999999999998863 2223222211 122333333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceec--CCCc-chHHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITE--ENKC-TEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~--~~~~-~~~a~~aad~vl~~~~~l~~~i 440 (703)
.+.+.++-..+.++|||| +.||+.|-++|++ .|++ |... .+.....+|+++.++..+.+.+
T Consensus 145 ~~~~~~~~~~~~~v~VGD-s~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 145 QALQTHQLAPEQAIIIGD-TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred hhhhhhhcccccceeecC-CHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 333333334567999999 9999999999998 4444 3222 2333344889887877776544
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.96 E-value=0.001 Score=63.22 Aligned_cols=123 Identities=13% Similarity=0.105 Sum_probs=82.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.++++.|+ +|+++.++|+........+.+.+|+... ...++...+... ..-.|+-=.
T Consensus 102 ~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~~~----------------~KP~~~~~~ 162 (230)
T d1x42a1 102 YPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL--FDSITTSEEAGF----------------FKPHPRIFE 162 (230)
T ss_dssp CTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG--CSEEEEHHHHTB----------------CTTSHHHHH
T ss_pred cccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc--cccccccccccc----------------cchhhHHHH
Confidence 789999999996 5899999999999999999999998752 223333332211 111121112
Q ss_pred HHHHHHHhCCCEEEEEeCCC-CCCHHHHhhCCcce-ecCC-CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSS-TRDTPALKEADVGI-TEEN-KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G-~ND~~al~~AdvGI-a~~~-~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-....+++||| . .+|+.+-++|++-. .+.. .........+|+++.+++.+.++|+
T Consensus 163 ~~~~~l~~~p~~~l~vgD-~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~ 227 (230)
T d1x42a1 163 LALKKAGVKGEEAVYVGD-NPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVD 227 (230)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHH
T ss_pred HHHhhhcccccccceeec-CcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHH
Confidence 233333333467999999 8 58999999998843 2321 2333344568998889999888876
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.81 E-value=0.00079 Score=66.79 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=39.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
|+|+++.++.|++.|+++.++||--...+..++++.|+..+
T Consensus 137 r~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ 177 (291)
T d2bdua1 137 KEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS 177 (291)
T ss_dssp CBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBT
T ss_pred ccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999999998754
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.74 E-value=0.0016 Score=59.81 Aligned_cols=134 Identities=13% Similarity=0.089 Sum_probs=75.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH---------------HHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA---------------VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t---------------a~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
-|++.++++.|+++|+++.++|...... ........|+... ...+.....+... . ..
T Consensus 29 ~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~p~~~~----~-~~ 100 (182)
T d2gmwa1 29 IDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHHPQGSV----E-EF 100 (182)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCBTTCSS----G-GG
T ss_pred CCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeeccccccccc----c-cc
Confidence 5899999999999999999999876321 1111122222210 0000000000000 0 00
Q ss_pred ccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc--eec--CCCcchHHhhccchhhcccccHHHH
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG--ITE--ENKCTEMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG--Ia~--~~~~~~~a~~aad~vl~~~~~l~~~ 439 (703)
..-..+..=.|.--..+.+.+.-..+.+.|||| ..+|+.|=+.|+++ +.+ |....+.....||+++.++..+.++
T Consensus 101 ~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGD-s~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 101 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGD-KLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEES-SHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred cccccccCCccccccchhhhcccccccccccCC-CHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 000001111233334455555544567999999 99999999999985 333 2222345555699999999999988
Q ss_pred Hh
Q 044228 440 LK 441 (703)
Q Consensus 440 i~ 441 (703)
|+
T Consensus 180 ik 181 (182)
T d2gmwa1 180 IK 181 (182)
T ss_dssp HH
T ss_pred hc
Confidence 76
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.00036 Score=66.43 Aligned_cols=53 Identities=17% Similarity=0.305 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHhC-CCEEEEEeCC---CCCCHHHHhhCC-cceecCCCcchHHhhccchh
Q 044228 375 ADKLLLVQTAKEK-GHVVAFFGGS---STRDTPALKEAD-VGITEENKCTEMARECSDIV 429 (703)
Q Consensus 375 ~~K~~iv~~lq~~-g~~v~~iGD~---G~ND~~al~~Ad-vGIa~~~~~~~~a~~aad~v 429 (703)
.+|..-++.+.+. .+.|+++||. |.||.+||+.|+ .|++++ +. +-+++.++.+
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~-~~~~~~~~~l 241 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-AP-EDTRRICELL 241 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SH-HHHHHHHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CH-HHHHHHHHHH
Confidence 4566666666543 5789999992 349999999998 688886 44 4445455543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.55 E-value=0.00075 Score=62.84 Aligned_cols=117 Identities=10% Similarity=0.063 Sum_probs=76.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++.|+++.++|+... .+..+.++.|+... -..++..++.. ...-.|+--.
T Consensus 84 ~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~--f~~i~~s~~~~----------------~~Kp~~~~~~ 144 (204)
T d2go7a1 84 MPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY--FTEILTSQSGF----------------VRKPSPEAAT 144 (204)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG--EEEEECGGGCC----------------CCTTSSHHHH
T ss_pred cchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc--ccccccccccc----------------ccchhHHHHH
Confidence 79999999999999999999998654 55677888998752 12222222111 1112333334
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a~~aad~vl~~~~~l~~~i 440 (703)
.+.+.+.-....++|||| +.+|+.+-+.|++. |++. .+.. .+|..+.++..+.+++
T Consensus 145 ~~~~~~~~~p~~~l~VgD-~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 145 YLLDKYQLNSDNTYYIGD-RTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQALADISRIF 201 (204)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEESS-CCSC----TTEEECSSTTHHHHHT
T ss_pred HHHHHhCCCCceEEEEeC-CHHHHHHHHHcCCeEEEEc-CCCC----CcCeecCCHHHHHHHh
Confidence 445555444568999999 99999999999985 4565 3322 3455444555555544
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0019 Score=61.39 Aligned_cols=119 Identities=13% Similarity=0.061 Sum_probs=76.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.+.+++|+++|+++.++|+..........+.+|+..-.+..... .++. ....-.|+-=.
T Consensus 129 ~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~----------------~~~KP~p~~~~ 191 (253)
T d1zs9a1 129 FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGH-FDTK----------------IGHKVESESYR 191 (253)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEE-ECGG----------------GCCTTCHHHHH
T ss_pred CCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhccee-eccc----------------cccCCCcHHHH
Confidence 799999999999999999999999999999999989886521100000 0000 11111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-c---CCCcchHHhhccchhhccccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-E---ENKCTEMARECSDIVISTVGS 435 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~---~~~~~~~a~~aad~vl~~~~~ 435 (703)
...+.+.-..+.++|||| ..+|+.+=++|++-.. + |..........++.++.+|..
T Consensus 192 ~~~~~~~~~p~~~l~vgD-~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~E 251 (253)
T d1zs9a1 192 KIADSIGCSTNNILFLTD-VTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSE 251 (253)
T ss_dssp HHHHHHTSCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGG
T ss_pred HHHHHhCCCcCcEEEEeC-CHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHH
Confidence 344444444578999999 9999999999998543 3 222222333455666555543
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.45 E-value=0.00041 Score=64.96 Aligned_cols=119 Identities=12% Similarity=0.051 Sum_probs=79.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|++ ++++.++|+.....+..+.++.|+... ...++.+.+.. ...-.|+--.
T Consensus 84 ~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~----------------~~KP~p~~~~ 144 (207)
T d2hdoa1 84 YPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDTP----------------KRKPDPLPLL 144 (207)
T ss_dssp CTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGSS----------------CCTTSSHHHH
T ss_pred ccchhhhhhhhcc-ccccccccccccccccccccccccccc--ccccccccccc----------------cchhhhhhhc
Confidence 6899999999974 799999999999999999999998752 22233332211 1111233334
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceec---CCCcchHHhhccchhhcccccHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE---ENKCTEMARECSDIVISTVGSLLP 438 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~---~~~~~~~a~~aad~vl~~~~~l~~ 438 (703)
.+++.++-..+.++|||| ..+|+.+-++|++.... | .......+.+|+++.++..|.+
T Consensus 145 ~~~~~~~~~~~~~l~VgD-s~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 145 TALEKVNVAPQNALFIGD-SVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEESSGGGGGG
T ss_pred ccccceeeeccceeEecC-CHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeCCHHHHHh
Confidence 444444433467899999 99999999999987542 3 2334444567777666665543
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.19 E-value=0.0044 Score=59.12 Aligned_cols=123 Identities=14% Similarity=0.118 Sum_probs=81.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++ |+++.++|+.........-+++|+... ...++.+.+... +.-.|+-=.
T Consensus 111 ~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~~~----------------~KP~p~~~~ 171 (247)
T d2gfha1 111 ADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY--FDAIVIGGEQKE----------------EKPAPSIFY 171 (247)
T ss_dssp CHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGSSS----------------CTTCHHHHH
T ss_pred CccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc--cccccccccccc----------------chhhhhhHH
Confidence 6899999999985 899999999999999999999998753 223333332211 011111112
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCcc-eec-CC--CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSST-RDTPALKEADVG-ITE-EN--KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~-ND~~al~~AdvG-Ia~-~~--~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++|||| .. +|+.+-+.|++. +.. .. .........+|+++.++..+.++|+
T Consensus 172 ~~~~~~~~~~~~~l~iGD-~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~ 238 (247)
T d2gfha1 172 HCCDLLGVQPGDCVMVGD-TLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQ 238 (247)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHH
T ss_pred HHHHHhhcCHHhcceecc-ChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHH
Confidence 233333333456999999 85 899999999996 432 11 1112223347888888888888887
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.78 E-value=0.0034 Score=60.59 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.4
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 334 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~ 334 (703)
+++.++|+.|+++|++++++|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 56789999999999999999987766666665543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.63 E-value=0.0038 Score=56.03 Aligned_cols=91 Identities=12% Similarity=0.002 Sum_probs=62.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh--
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE-LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA-- 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~-- 375 (703)
.|++.++++.|+++|+++.++|+-+ ...+...-+..++... .. .+.+.-.|.
T Consensus 48 ~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~--~~-----------------------~~~~~~kp~~~ 102 (164)
T d1u7pa_ 48 YPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKY--FI-----------------------QREIYPGSKVT 102 (164)
T ss_dssp CTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGG--CS-----------------------EEEESSSCHHH
T ss_pred chHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccc--ce-----------------------eeecccCCChH
Confidence 8999999999999999999999755 4556666677776542 00 022222232
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
.-.++.+.+.-..+.++|+|| ..+|+.+-++|++- |.+.
T Consensus 103 ~~~~~~~~~~~~~~~~l~igD-~~~di~aA~~aG~~~i~v~ 142 (164)
T d1u7pa_ 103 HFERLHHKTGVPFSQMVFFDD-ENRNIIDVGRLGVTCIHIR 142 (164)
T ss_dssp HHHHHHHHHCCCGGGEEEEES-CHHHHHHHHTTTCEEEECS
T ss_pred HHHHHHHHhCCChHHEEEEcC-CHHHHHHHHHcCCEEEEEC
Confidence 223334444334568999999 99999999999883 4443
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.48 E-value=0.01 Score=53.99 Aligned_cols=105 Identities=16% Similarity=0.030 Sum_probs=67.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+|+++.++.|++.|+++.++|+-+.... .+-+..|+... -..++.+++... ..-.|+--.
T Consensus 81 ~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~--fd~i~~~~~~~~----------------~KP~p~~~~ 141 (187)
T d2fi1a1 81 FEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY--FTEVVTSSSGFK----------------RKPNPESML 141 (187)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG--EEEEECGGGCCC----------------CTTSCHHHH
T ss_pred cchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc--cccccccccccc----------------cCCCHHHHH
Confidence 68999999999999999999998766554 56778888752 223333332210 011122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHHhhccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMARECSD 427 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a~~aad 427 (703)
.+.+.+. .+.+++||| ..+|+.+-++|++- |.+ ++....++..|
T Consensus 142 ~~~~~~~--~~~~l~vgD-s~~Di~aA~~aG~~~i~v--~~~~~~~~~~d 186 (187)
T d2fi1a1 142 YLREKYQ--ISSGLVIGD-RPIDIEAGQAAGLDTHLF--TSIVNLRQVLD 186 (187)
T ss_dssp HHHHHTT--CSSEEEEES-SHHHHHHHHHTTCEEEEC--SCHHHHHHHHT
T ss_pred HHHHHcC--CCCeEEEeC-CHHHHHHHHHcCCEEEEE--CCCCChHhhcC
Confidence 3333332 234899999 99999999999886 444 35555555554
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.21 E-value=0.0084 Score=55.77 Aligned_cols=122 Identities=11% Similarity=0.120 Sum_probs=82.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.+++.|+++.++|+-........-+..++... ...++...+.. ...-.|+-=.
T Consensus 95 ~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~--fd~~~~s~~~~----------------~~KP~p~~~~ 156 (220)
T d1zrna_ 95 FSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG--FDHLLSVDPVQ----------------VYKPDNRVYE 156 (220)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEESGGGT----------------CCTTSHHHHH
T ss_pred cchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccc--ccceeeeeeee----------------ccccHHHHHH
Confidence 68899999999999999999999999999999888888753 23333333321 1111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cC--CCcchHHhhccchhhcccccHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EE--NKCTEMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~--~~~~~~a~~aad~vl~~~~~l~~~ 439 (703)
.+.+.+.-..+.++|||| ..+|+.+=++|++-.. +. +...+.....+|+++.++..++++
T Consensus 157 ~~~~~~g~~p~e~l~VgD-~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 157 LAEQALGLDRSAILFVAS-NAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp HHHHHHTSCGGGEEEEES-CHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHhCCCCceEEEEec-ChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 344444444567999999 9999999999998643 42 122222334578877777666543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.19 E-value=0.022 Score=54.74 Aligned_cols=61 Identities=20% Similarity=0.206 Sum_probs=39.9
Q ss_pred HHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCc-ceecCC-Ccc-hHHh---hccchhhcccccHHHHHh
Q 044228 380 LVQTAKEKGHVVAFFGGSST-RDTPALKEADV-GITEEN-KCT-EMAR---ECSDIVISTVGSLLPILK 441 (703)
Q Consensus 380 iv~~lq~~g~~v~~iGD~G~-ND~~al~~Adv-GIa~~~-~~~-~~a~---~aad~vl~~~~~l~~~i~ 441 (703)
..+.+.-..+.++|||| .. ||+.+-++|++ +|.+.. ... +... ..+|+++.++..|.++|+
T Consensus 194 a~~~l~~~~~~~lmVGD-~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l~ 261 (261)
T d1vjra_ 194 ISEKFGVPKERMAMVGD-RLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ 261 (261)
T ss_dssp HHHHHTCCGGGEEEEES-CHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred HHhhhccCchhcceecC-ChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 33333334578999999 96 59999999997 555531 112 2122 224888888888887763
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.05 E-value=0.012 Score=54.60 Aligned_cols=90 Identities=18% Similarity=0.249 Sum_probs=64.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE----LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~----~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++.+.++.+++.|++|+.+||+. ..|+.++-+.+|+.........+.+.+ ...
T Consensus 88 ~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~---------------------~~K 146 (209)
T d2b82a1 88 KEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK---------------------PGQ 146 (209)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC---------------------TTC
T ss_pred chhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC---------------------CCc
Confidence 5789999999999999999999986 457788888899875422223222221 111
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceec
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITE 414 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~ 414 (703)
..|.+.++ + -.+++++|| ..+|..+-++|++ +|-+
T Consensus 147 ~~rr~~Ik---~-y~I~l~~GD-~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 147 NTKSQWLQ---D-KNIRIFYGD-SDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCSHHHHH---H-TTEEEEEES-SHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHH---H-cCeEEEecC-CHHHHhHHHHcCCCceEe
Confidence 33555543 3 358999999 9999999999986 5654
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.55 E-value=0.011 Score=51.70 Aligned_cols=94 Identities=10% Similarity=-0.105 Sum_probs=56.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh--ccCceEE------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL--DSMTLMG------ 370 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~--~~~~v~~------ 370 (703)
.+++.+.++.|+++|+++.++||.+......+.+.++.. .....+.. .....+.
T Consensus 38 ~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 99 (149)
T d1ltqa1 38 NPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT------------------RKWVEDIAGVPLVMQCQREQGDT 99 (149)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH------------------HHHHHHTTCCCCSEEEECCTTCC
T ss_pred CHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH------------------hhhhhhcCCCcEEEeeccccccc
Confidence 789999999999999999999998742211110000000 00000000 0000111
Q ss_pred EeChhhHHHHHHHHHhCC-CEEEEEeCCCCCCHHHHhhCCcc
Q 044228 371 SCLAADKLLLVQTAKEKG-HVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~~g-~~v~~iGD~G~ND~~al~~AdvG 411 (703)
|-.+.-|..+.+.+...+ .+++++|| -..|+.|.+++++=
T Consensus 100 ~~d~~~k~~~l~~~~~~~~~i~~~igD-~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 100 RKDDVVKEEIFWKHIAPHFDVKLAIDD-RTQVVEMWRRIGVE 140 (149)
T ss_dssp SCHHHHHHHHHHHHTTTTCEEEEEEEC-CHHHHHHHHHTTCC
T ss_pred CCchHHHHHHHHHhccCCCceEEEEcC-CHHHHHHHHHCCCc
Confidence 223456777777766554 45688999 99999999999884
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.18 E-value=0.038 Score=52.67 Aligned_cols=40 Identities=10% Similarity=0.142 Sum_probs=29.6
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHHcCCCCC
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDE---LLAVTEVACELGNFRP 339 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~---~~ta~~ia~~~gi~~~ 339 (703)
+++.++|+.|+++|++++.+|+.. .....+.-+++|+..+
T Consensus 22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 578899999999999999998544 4444444456787654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.00 E-value=0.035 Score=51.24 Aligned_cols=105 Identities=15% Similarity=0.085 Sum_probs=68.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSED----ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
++++.+.++.|+++|+++.++|+- ............|+... -..++.+++.. ...-.|
T Consensus 99 ~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~--fd~i~~s~~~~----------------~~KP~p 160 (222)
T d1cr6a1 99 NRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH--FDFLIESCQVG----------------MIKPEP 160 (222)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG--CSEEEEHHHHS----------------CCTTCH
T ss_pred CccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh--hceeeehhhcc----------------CCCCCh
Confidence 889999999999999999999962 33344445555665532 12333333221 111234
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecCCCcchHHh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEENKCTEMAR 423 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~~~~~~~a~ 423 (703)
+--....+.++-..+.++|||| ..+|+.+-++|++ +|.+. ++.+...
T Consensus 161 ~~~~~~~~~~~v~p~~~l~IgD-~~~Di~~A~~aG~~ti~V~-~~~~~~~ 208 (222)
T d1cr6a1 161 QIYNFLLDTLKAKPNEVVFLDD-FGSNLKPARDMGMVTILVH-NTASALR 208 (222)
T ss_dssp HHHHHHHHHHTSCTTSEEEEES-SSTTTHHHHHHTCEEEECC-SSSHHHH
T ss_pred HHHHHHHHHhCCCcceEEEEEC-CHHHHHHHHHcCCEEEEEC-CcchHHH
Confidence 4445555666555677999999 9999999999998 56665 3444433
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.87 E-value=0.015 Score=54.06 Aligned_cols=96 Identities=11% Similarity=-0.003 Sum_probs=64.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-||+.+.++.|++.|+++.++|+... +....+..|+... ...++.+.+.. ...-.|+-=.
T Consensus 93 ~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~--f~~i~~~~~~~----------------~~KP~~~~~~ 152 (221)
T d1o08a_ 93 YPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY--FDAIADPAEVA----------------ASKPAPDIFI 152 (221)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG--CSEECCTTTSS----------------SCTTSTHHHH
T ss_pred cCCceeccccccccccceEEEeecch--hhHHHHhhccccc--ccccccccccc----------------ccccChHHHH
Confidence 68999999999999999999999754 5677788888753 23333333221 1111222112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEE 415 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~ 415 (703)
.+.+.+.-..+.++|||| ..+|+.+-+.|++ .|+++
T Consensus 153 ~~l~~~~i~~~~~l~VgD-~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 153 AAAHAVGVAPSESIGLED-SQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEES
T ss_pred HHHHHcCCCCceEEEEec-CHHHHHHHHHcCCEEEEEC
Confidence 233333333457899999 9999999999987 45565
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.23 E-value=0.083 Score=49.26 Aligned_cols=134 Identities=17% Similarity=0.189 Sum_probs=85.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhcc--------------------CHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFREL--------------------NSTE 358 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~--------------------~~~~ 358 (703)
=||+.++++.+++. ....++|---.+-+.++|+.+|+... .--+.-+++.+ +.++
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e----~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ee 157 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE----LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 157 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE----EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred cCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce----eecccccccccCCChHHHHHHHHHhhhccCccHHH
Confidence 58999999999887 66777777778889999999999521 11111122211 1122
Q ss_pred HH-------------HhhccCceEEEeChhhHHHHHHHHHhC-C-CEEEEEeCCCCCCHHHHhhCCc--ceecCCCcchH
Q 044228 359 RM-------------AKLDSMTLMGSCLAADKLLLVQTAKEK-G-HVVAFFGGSSTRDTPALKEADV--GITEENKCTEM 421 (703)
Q Consensus 359 ~~-------------~~~~~~~v~~r~~P~~K~~iv~~lq~~-g-~~v~~iGD~G~ND~~al~~Adv--GIa~~~~~~~~ 421 (703)
+. +++.+++.. --..|..+++..-+. + ...+.+|| ...|+.||+.|.= |+|++=||.+-
T Consensus 158 l~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGD-SITDve~Lr~~r~~gGlaIsFNGN~Y 233 (308)
T d1y8aa1 158 LFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGD-SISDYKMFEAARGLGGVAIAFNGNEY 233 (308)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEEC-SGGGHHHHHHHHHTTCEEEEESCCHH
T ss_pred HHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccC-ccccHHHHHHHhcCCCeeEEecCccc
Confidence 21 222233322 125566666554332 2 23478999 9999999998754 67766678999
Q ss_pred Hhhccchhhc--ccccHHHHHh
Q 044228 422 ARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 422 a~~aad~vl~--~~~~l~~~i~ 441 (703)
+...||+++. +...+..++.
T Consensus 234 al~eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 234 ALKHADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp HHTTCSEEEECSSTHHHHHHHH
T ss_pred cccccceEEeccchhHHHHHHH
Confidence 9999999888 5555554443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=92.85 E-value=0.041 Score=51.21 Aligned_cols=23 Identities=17% Similarity=0.514 Sum_probs=21.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcC
Q 044228 299 REEIKSTVEALRNAGVRIILVSE 321 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TG 321 (703)
-|++.++|+.|+++|+++.++|-
T Consensus 50 ~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 50 RPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CGGGHHHHHHHHHHTCCEEEEEE
T ss_pred cccHHHHHHHHHhhCCeEEEecc
Confidence 78999999999999999999994
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=92.70 E-value=0.095 Score=48.96 Aligned_cols=122 Identities=13% Similarity=0.128 Sum_probs=78.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+++++|+ |+++.++|..+...+...-+..|+... ...++.+++.... .-.|+-=.
T Consensus 95 ~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~--fd~v~~s~~~~~~----------------KP~p~~f~ 154 (245)
T d1qq5a_ 95 YPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAKRVF----------------KPHPDSYA 154 (245)
T ss_dssp CTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGTCC----------------TTSHHHHH
T ss_pred chhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc--ccccccccccccc----------------CccHHHHH
Confidence 577888888775 788999999999999988888888753 3445555443211 11121112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcch-------------------------HHhhccchhhcc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTE-------------------------MARECSDIVIST 432 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~-------------------------~a~~aad~vl~~ 432 (703)
.+++.+.-+.+.+++||| ..+|+.+=++|++- |.+.-.+.+ .....+|+++.+
T Consensus 155 ~a~~~lg~~p~e~l~VgD-~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~ 233 (245)
T d1qq5a_ 155 LVEEVLGVTPAEVLFVSS-NGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (245)
T ss_dssp HHHHHHCCCGGGEEEEES-CHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHhCCChhhEEEEeC-CHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECC
Confidence 233334334456999999 99999998998863 333211100 011247888889
Q ss_pred cccHHHHHh
Q 044228 433 VGSLLPILK 441 (703)
Q Consensus 433 ~~~l~~~i~ 441 (703)
+..++.+|+
T Consensus 234 l~el~~lv~ 242 (245)
T d1qq5a_ 234 LGDLPRLVR 242 (245)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988876
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=91.44 E-value=0.15 Score=48.34 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCC-CHHHHhhCCc-ceecC
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTR-DTPALKEADV-GITEE 415 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~N-D~~al~~Adv-GIa~~ 415 (703)
..+.+.++-..+.++|||| ..+ |+.+-++|++ +|.+.
T Consensus 187 ~~al~~l~i~~~~~~mIGD-s~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 187 NKALDRLGVKRHEAIMVGD-NYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp HHHHHHHTSCGGGEEEEES-CTTTTHHHHHHTTCEEEEES
T ss_pred eehhhhccccccceEEEcC-ChHHHHHHHHHCCCCEEEEC
Confidence 3444455445568999999 976 9999999999 66653
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.32 E-value=0.12 Score=47.02 Aligned_cols=98 Identities=14% Similarity=0.048 Sum_probs=58.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHH----HHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAV----TEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta----~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++.+.++.|++.|++++++|....... ...-...++... ...++.+.+.. ...-.|
T Consensus 101 ~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~--fd~i~~s~~~~----------------~~KP~~ 162 (225)
T d1zd3a1 101 NRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH--FDFLIESCQVG----------------MVKPEP 162 (225)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT--SSEEEEHHHHT----------------CCTTCH
T ss_pred CccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh--ccEEEeccccc----------------cchhHH
Confidence 78999999999999999999997543222 222222333221 12233332211 001122
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecC
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEE 415 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~ 415 (703)
+-=..+.+.+.-....++|||| ...|+.+-++|++ +|.+.
T Consensus 163 ~~~~~~~~~~~~~p~e~l~VgD-~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 163 QIYKFLLDTLKASPSEVVFLDD-IGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp HHHHHHHHHHTCCGGGEEEEES-CHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHhhhcccCccceeEEec-CHHHHHHHHHcCCEEEEEC
Confidence 2223344444434467889999 9999999999999 66665
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=88.63 E-value=0.25 Score=45.21 Aligned_cols=121 Identities=11% Similarity=0.040 Sum_probs=75.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh--h
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA--D 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~--~ 376 (703)
.+++.+.+++|+ .+..++|+-....+..+-+.+|+...-+ ..+..+++.. ..+..|. .
T Consensus 87 ~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~-~~~~~~~~~~----------------~~~~KP~~~~ 146 (222)
T d2fdra1 87 IDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFA-PHIYSAKDLG----------------ADRVKPKPDI 146 (222)
T ss_dssp CTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTT-TCEEEHHHHC----------------TTCCTTSSHH
T ss_pred hhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccc-eeeccccccc----------------ccccccCHHH
Confidence 677777776665 5567899999999999999999986311 1222222211 0112332 2
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcc--------hHHhhccchhhcccccHHHHHh
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCT--------EMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~--------~~a~~aad~vl~~~~~l~~~i~ 441 (703)
=....+.+.-..+.++|||| ..+|+.+=+.|++- |++. .+. +....-+|+++.++..+..+|.
T Consensus 147 ~~~~~~~l~~~p~~~l~vgD-s~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~ 218 (222)
T d2fdra1 147 FLHGAAQFGVSPDRVVVVED-SVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHH
T ss_pred HHHHHHhhCCCCceEEEEcC-CHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEECCHHHHHHHHH
Confidence 23334444434568999999 99999999999973 4443 121 1122348999888888877664
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=85.15 E-value=0.13 Score=45.54 Aligned_cols=24 Identities=13% Similarity=0.433 Sum_probs=22.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSED 322 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD 322 (703)
-|++.++++.|+++|+++.++|..
T Consensus 32 ~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 32 EPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred CccHHHHHHHHHHcCCceeeeccc
Confidence 689999999999999999999964
|