Citrus Sinensis ID: 044410

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400--
Protein Sequence
GKKEKSNSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTNY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccEEEEEEEEEccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccccEEEEEEccccEEEEEEcccccccccccccEEEEEEEEEEcccccccEEEEEEccEEEEEEccccHHHHHHHHHHHHHHHHccccccccccccEEEccccHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHcccccccEEEEEEEEccccEEEcccHHHHHHHHccccccHHHHHHHHHHHHHccccEEEccccHHHHHccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccEEEEEEccccccccHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEEEcHHHcccccccccHHHHHHHHHEccEEEEEEEEccccccccccccEEEEEEEEEEcccccccEEccEEccEEccEEcccHHHHHHHHHHHHHHHHHHHHccccHHHcEEEEccccHHHHHHHHHHHcccHHHHHHHHHHHHHHcEcHHHHHHHHHHHHHHHHHHccccEccccccEEEEEEEEcccEEEEEEEEEcEcccccc
Coil and Loop (DISEMBL)
gkkeksnsrlydmttvksnqgptatilaigtstppncfyqadypdfyfrvtnsdhkTELKEKFKRICERQSIKKRYFHLTEEIlkenpnmccyeapslDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAfygvdmpgaDVRLMRLlglkpsvnrLMIYTQGCYMGGTVIRLAKDiaennpgarvLVVCSdirvldfhepsethlDVLVVQAVfgdgagaaiigadsdisnhesplfQILSctqttvpdtenyISGQLkemgtychlsrdvPVAIGNYVDkclsnamspigisdwnslfyvvhpggdglLDQVEKTLGLRKEKLWASRYVLReygnmgapsvFFILDEVRKKSIEEMKAttgeglecgvlfgfgpglTVETVVLQSVSTNFTNY
Flexible Loop (DISEMBL)
gkkeksnsrlydmttvksnqgptATILAIGTSTPPNCFYQADYPDFYFRVTNSDhktelkekfkricerqsikkRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLReygnmgapsvFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTNY
Low Complexity Region (SEG)
GKKEKSNSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFgdgagaaiigadsdisNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTNY
Disordered region (IsUnstruct)
**********************TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKC********GISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV*******
Disordered Region (DISOPRED)
*************************ILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE*****************ECGVLFGFGPGLTVETVVLQSVST*****
Disordered Region (DISEMBL)
*********LYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTNY
Disordered Region (DISPRO)
********************GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
GKKEKSNSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTNY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	402	2.2.26 [Sep-21-2011]
P51090	393	Chalcone synthase OS=Viti	yes	no	0.955	0.977	0.670	1e-152
P16107	398	Chalcone synthase OS=Petr	N/A	no	0.977	0.987	0.643	1e-150
Q9ZS40	397	Chalcone synthase 2 OS=Da	N/A	no	0.977	0.989	0.632	1e-148
P51075	395	Chalcone synthase OS=Betu	N/A	no	0.950	0.967	0.645	1e-147
Q9XJ57	391	Chalcone synthase 2 OS=Ci	no	no	0.950	0.976	0.648	1e-147
P48385	398	Chalcone synthase OS=Call	N/A	no	0.947	0.957	0.639	1e-147
P48390	398	Chalcone synthase 1 OS=Ge	N/A	no	0.962	0.972	0.630	1e-147
O23730	394	Chalcone synthase 4 OS=Br	N/A	no	0.955	0.974	0.632	1e-147
O23729	394	Chalcone synthase 3 OS=Br	N/A	no	0.955	0.974	0.632	1e-147
O23731	394	Chalcone synthase 8 OS=Br	N/A	no	0.955	0.974	0.632	1e-146

>sp|P51090|CHSY_VITVI Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1

 Score =  539 bits (1388), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 259/386 (67%), Positives = 307/386 (79%), Gaps = 2/386 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP AT+LAIGT+TP NC YQADYPD+YFR+TNS+H TELKEKFKR+CE+  
Sbjct: 6   EIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSM 64

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           I KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQP SKI
Sbjct: 65  INKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKI 124

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THL+F    GVDMPGAD +L +LLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+
Sbjct: 125 THLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGS 184

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVCS+I  + F  PS+THLD LV QA+FGDGA A IIGAD D +  E PLF+++S  
Sbjct: 185 RVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIELPLFELVSAA 243

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD+E  I G L+E+G   HL +DVP  I   ++K L  A +PIGISDWNSLF++ H
Sbjct: 244 QTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAH 303

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL++EKL A+R+VL EYGNM +  V FILDE+RKKSIEE K +TGE
Sbjct: 304 PGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGE 363

Query: 372 GLECGVLFGFGPGLTVETVVLQSVST 397
           GLE GVLFGFGPGLTVETVVL SVS 
Sbjct: 364 GLEWGVLFGFGPGLTVETVVLHSVSA 389

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.
Vitis vinifera (taxid: 29760)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4

>sp|P16107|CHSY_PETCR Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1

 Score =  532 bits (1371), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 254/395 (64%), Positives = 310/395 (78%), Gaps = 2/395 (0%)

Query: 7   NSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRI 66
           N+ + ++   +  QGP A ILAIGT+TP NC YQADYPD+YFR+TNS+H T+LK KFKR+
Sbjct: 6   NAEIEEIRNRQRAQGP-ANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRM 64

Query: 67  CERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQ 126
           CE+  I+KRY H+TEE LKENPN+C YEAPSLDARQ +++ EVP+LGKEAA KAIKEWGQ
Sbjct: 65  CEKSMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAASKAIKEWGQ 124

Query: 127 PVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186
           P SKITHLIF    GVDMPGAD +L +LLGL+PSV R M+Y QGC+ GGTV+RLAKD+AE
Sbjct: 125 PKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 184

Query: 187 NNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQ 246
           NN GARVLVVCS+I  + F  PS++HLD LV QA+FGDGA A I+G+D D+S  E PLFQ
Sbjct: 185 NNAGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVILGSDPDLSV-ERPLFQ 243

Query: 247 ILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL 306
           ++S  QT +PD++  I G L+E+G   HL +DVP  I   ++K L  A  PIGISDWNSL
Sbjct: 244 LISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSL 303

Query: 307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366
           F++ HPGG  +LDQVE  LGL++EK+ A+R VL +YGNM +  V FILDE+RKKSIEE K
Sbjct: 304 FWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGK 363

Query: 367 ATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTN 401
           ATTGEGL+ GVLFGFGPGLTVETVVL SV   FT+
Sbjct: 364 ATTGEGLDWGVLFGFGPGLTVETVVLHSVPATFTH 398

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Petroselinum crispum (taxid: 4043)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9ZS40|CHS2_DAUCA Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1

 Score =  526 bits (1354), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 250/395 (63%), Positives = 308/395 (77%), Gaps = 2/395 (0%)

Query: 7   NSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRI 66
           N+ + ++   +  QGP A ILAIGT+TP NC YQADYPD+YFR+TNS+H ++LK KFKR+
Sbjct: 5   NAEIEEIRKRQRAQGP-ANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRM 63

Query: 67  CERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQ 126
           CE+  I+KRY H+TEE LKENPN+C YEAPSLDARQ +++ EVP+LGKEAA KAIKEWG 
Sbjct: 64  CEKSMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAAAKAIKEWGH 123

Query: 127 PVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186
           P SKITHLIF    GVDMPGAD +L +LLGL+PSV R M+Y QGC+ GGTV+RLAKD+AE
Sbjct: 124 PKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 183

Query: 187 NNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQ 246
           NN GARVLVVCS+I  + F  PS++HLD LV QA+FGDGA A I+G+D D+S  E PLFQ
Sbjct: 184 NNTGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVIVGSDPDLSV-ERPLFQ 242

Query: 247 ILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL 306
           ++S  QT +PD++  I G L+E+G   HL +DVP  I   ++K L  A  PIGISDWNSL
Sbjct: 243 LISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSL 302

Query: 307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366
           F++ HPGG  +LDQVE  LGL++EK+ A+R VL +YGNM +  V FILDE+RKKSIEE K
Sbjct: 303 FWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGK 362

Query: 367 ATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTN 401
           ATTG+GL+ GVLFGFGPGLTVETVVL SV    T+
Sbjct: 363 ATTGDGLDWGVLFGFGPGLTVETVVLHSVPATITH 397

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Daucus carota (taxid: 4039)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P51075|CHSY_BETPN Chalcone synthase OS=Betula pendula GN=CHS PE=2 SV=2

 Score =  522 bits (1344), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/384 (64%), Positives = 301/384 (78%), Gaps = 2/384 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +   GP AT+LAIGT+TP NC  QADYPD+YFR+T SDH TELKEKFKR+C++  
Sbjct: 6   EIRKAQRAHGP-ATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMCDKSM 64

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IKKRY +L EEIL ENPNMC Y APSLDARQ +++ EVPKLGKEAA KAIKEWGQP SKI
Sbjct: 65  IKKRYMYLNEEILNENPNMCAYMAPSLDARQTIVVVEVPKLGKEAATKAIKEWGQPKSKI 124

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THL+F    GVDMPGAD +L +LLGL+PSV RLM+Y QGC+ GGTV+RLAKD+AENN GA
Sbjct: 125 THLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGA 184

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVCS+I  + F  P++THLD LV QA+FGDGA A I+GAD D S  E PLF+++S  
Sbjct: 185 RVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLFELISAA 243

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD++  I G L+E+G   HL +DVP  I   ++K L+ A +P+GISDWNSLF++ H
Sbjct: 244 QTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLAEAFAPLGISDWNSLFWIAH 303

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL++EKL A+R+VL EYGNM +  V FILDE+R+ S+E  K TTGE
Sbjct: 304 PGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSLEGGKVTTGE 363

Query: 372 GLECGVLFGFGPGLTVETVVLQSV 395
           GLE GVLFGFGPGLTVETVVL SV
Sbjct: 364 GLEWGVLFGFGPGLTVETVVLHSV 387

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Betula pendula (taxid: 3505)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9XJ57|CHS2_CITSI Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1

 Score =  521 bits (1343), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 249/384 (64%), Positives = 303/384 (78%), Gaps = 2/384 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +   GP AT+LAIGT+TP +   QADYPD+YFR+T S+H TELKEKFKR+C++  
Sbjct: 6   EIRNAQRADGP-ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSM 64

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IKKRY +LTEEILKENPNMC Y APSLDARQ +++ EVPKLGKEAA KAIKEWGQP SKI
Sbjct: 65  IKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKI 124

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLIF    GVDMPGAD +L +L+GL+PSV R M+Y QGC+ GGTV+RLAKD+AENN GA
Sbjct: 125 THLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGA 184

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVCS+I  + F  P++THLD LV QA+FGDGA A I+GAD D S  E PL+Q++S +
Sbjct: 185 RVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLYQLVSTS 243

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD++  I G L+E+G   HL +DVP  I   ++K LS A +P+GISDWNS+F++ H
Sbjct: 244 QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAH 303

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL+ EKL A+R VL EYGNM +  V FILDE+RKKS+EE KATTGE
Sbjct: 304 PGGPAILDQVESKLGLKGEKLKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGE 363

Query: 372 GLECGVLFGFGPGLTVETVVLQSV 395
           GL+ GVLFGFGPGLTVETVVL SV
Sbjct: 364 GLDWGVLFGFGPGLTVETVVLHSV 387

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Citrus sinensis (taxid: 2711)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P48385|CHSY_CALCH Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2

 Score =  521 bits (1341), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 245/383 (63%), Positives = 303/383 (79%), Gaps = 2/383 (0%)

Query: 17  KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRY 76
           +  QGP ATILAIGT+TP NC YQADYPD+YFR+T S+H  +LKEKFKR+C++  I+KRY
Sbjct: 14  QRRQGP-ATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRY 72

Query: 77  FHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIF 136
            HLTEE LKENP++C Y APSLDARQ +++ EVPKLGKEAA KAIKEWGQP SKITHLIF
Sbjct: 73  MHLTEEYLKENPSLCEYMAPSLDARQDVVVVEVPKLGKEAATKAIKEWGQPKSKITHLIF 132

Query: 137 SAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVV 196
               GVDMPGAD +L +LLGL+PSV R M+Y QGC+ GGTV+RLAKD+AENN GARVLVV
Sbjct: 133 CTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVV 192

Query: 197 CSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVP 256
           CS+I  + F  P++THLD LV QA+FGDGA A I+GAD D++  E PLF+++S  QT +P
Sbjct: 193 CSEITAVTFRGPNDTHLDSLVGQALFGDGAAAVIVGADPDLTT-ERPLFEMISAAQTILP 251

Query: 257 DTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDG 316
           D+E  I G L+E+G   HL +DVP  I   ++K L+ A SP+GI+DWNS+F++ HPGG  
Sbjct: 252 DSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALTQAFSPLGITDWNSIFWIAHPGGPA 311

Query: 317 LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECG 376
           +LDQVE  LGL++EK+ A+R+VL EYGNM +  V FI+DE+RKKS E+  ATTGEGL+ G
Sbjct: 312 ILDQVELKLGLKEEKMRATRHVLSEYGNMSSACVLFIIDEMRKKSAEDGAATTGEGLDWG 371

Query: 377 VLFGFGPGLTVETVVLQSVSTNF 399
           VLFGFGPGLTVETVVL S+ T  
Sbjct: 372 VLFGFGPGLTVETVVLHSLPTTM 394

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Callistephus chinensis (taxid: 13379)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P48390|CHS1_GERHY Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1

 Score =  521 bits (1341), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 247/392 (63%), Positives = 304/392 (77%), Gaps = 5/392 (1%)

Query: 12  DMTTVKSNQ---GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICE 68
           DM  ++  Q   GP ATILAIGT+TP NC YQADYPD+YFR+T S+H  +LKEKFKR+C+
Sbjct: 6   DMKAIRDAQRAEGP-ATILAIGTATPANCVYQADYPDYYFRITKSEHMVDLKEKFKRMCD 64

Query: 69  RQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPV 128
           +  I+KRY H+TEE LK+NPNMC Y APSLD RQ +++ EVPKLGKEAA+KAIKEWG P 
Sbjct: 65  KSMIRKRYMHITEEYLKQNPNMCAYMAPSLDVRQDLVVVEVPKLGKEAAMKAIKEWGHPK 124

Query: 129 SKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN 188
           SKITHLIF    GVDMPGAD +L +LLGL+PSV R M+Y QGC+ GGTV+RLAKD+AENN
Sbjct: 125 SKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 184

Query: 189 PGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQIL 248
            GARVLVVCS+I  + F  P++THLD LV QA+FGDGA A I+G+D D++  E PLF+++
Sbjct: 185 KGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAAAVIVGSDPDLTT-ERPLFEMV 243

Query: 249 SCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFY 308
           S  QT +PD+E  I G L+E+G   HL +DVP  I   ++K L+ A SP+GI+DWNS+F+
Sbjct: 244 SAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALTTAFSPLGINDWNSIFW 303

Query: 309 VVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT 368
           + HPGG  +LDQVE  LGL++EKL A+R+VL EYGNM +  V FI+DE+RKKS E    T
Sbjct: 304 IAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFIIDEMRKKSSENGAGT 363

Query: 369 TGEGLECGVLFGFGPGLTVETVVLQSVSTNFT 400
           TGEGLE GVLFGFGPGLTVETVVL SV T  T
Sbjct: 364 TGEGLEWGVLFGFGPGLTVETVVLHSVPTTVT 395

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Gerbera hybrida (taxid: 18101)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|O23730|CHS4_BROFI Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1

 Score =  520 bits (1339), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 244/386 (63%), Positives = 303/386 (78%), Gaps = 2/386 (0%)

Query: 10  LYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICER 69
           + ++   +  +GP A +LAIGTSTPPN  YQADYPD+YFR+T S+H TELKEKFKR+C++
Sbjct: 5   MEEIRQAQRAEGPAA-VLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDK 63

Query: 70  QSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVS 129
             IKKRY +LTEEILKENPN+C + APSLDARQ +++ EVPKL KEAA++AIKEWG P S
Sbjct: 64  SMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKS 123

Query: 130 KITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNP 189
           +ITHLIF    G+DMPGAD +L RLLGL+PSVNR M+Y QGC+ GGTV+RLAKD+AENN 
Sbjct: 124 RITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNA 183

Query: 190 GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILS 249
           GARVLVVCS+I  + F  PSE+HLD LV QA+FGDGA A I+G+D D S  E PLFQ++S
Sbjct: 184 GARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPD-SATERPLFQLVS 242

Query: 250 CTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYV 309
            +QT +P++E  I G L+E+G   HL +DVP  I   + KCL +A  P+G+ DWNS+F++
Sbjct: 243 ASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWI 302

Query: 310 VHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT 369
            HPGG  +LDQVE  LGL+ EKL ASR VL EYGNM +  V FILDE+R++S E  +ATT
Sbjct: 303 AHPGGPAILDQVEIKLGLKAEKLAASRSVLAEYGNMSSACVLFILDEMRRRSAEAGQATT 362

Query: 370 GEGLECGVLFGFGPGLTVETVVLQSV 395
           GEGLE GVLFGFGPGLTVET+VL+SV
Sbjct: 363 GEGLEWGVLFGFGPGLTVETIVLRSV 388

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Bromheadia finlaysoniana (taxid: 41205)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|O23729|CHS3_BROFI Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1

 Score =  520 bits (1339), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 244/386 (63%), Positives = 303/386 (78%), Gaps = 2/386 (0%)

Query: 10  LYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICER 69
           + ++   +  +GP A +LAIGTSTPPN  YQADYPD+YFR+T S+H TELKEKFKR+C++
Sbjct: 5   MEEIRQAQRAEGPAA-VLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDK 63

Query: 70  QSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVS 129
             IKKRY +LTEEILKENPN+C + APSLDARQ +++ EVPKL KEAA++AIKEWG P S
Sbjct: 64  SMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKS 123

Query: 130 KITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNP 189
           +ITHLIF    G+DMPGAD +L RLLGL+PSVNR M+Y QGC+ GGTV+RLAKD+AENN 
Sbjct: 124 RITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNA 183

Query: 190 GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILS 249
           GARVLVVCS+I  + F  PSE+HLD LV QA+FGDGA A I+G+D D S  E PLFQ++S
Sbjct: 184 GARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPD-SATERPLFQLVS 242

Query: 250 CTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYV 309
            +QT +P++E  I G L+E+G   HL +DVP  I   + KCL +A  P+G+ DWNS+F++
Sbjct: 243 ASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWI 302

Query: 310 VHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT 369
            HPGG  +LDQVE  LGL+ EKL ASR VL EYGNM +  V FILDE+R++S E  +ATT
Sbjct: 303 AHPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATT 362

Query: 370 GEGLECGVLFGFGPGLTVETVVLQSV 395
           GEGLE GVLFGFGPGLTVET+VL+SV
Sbjct: 363 GEGLEWGVLFGFGPGLTVETIVLRSV 388

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Bromheadia finlaysoniana (taxid: 41205)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|O23731|CHS8_BROFI Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1

 Score =  519 bits (1337), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 244/386 (63%), Positives = 302/386 (78%), Gaps = 2/386 (0%)

Query: 10  LYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICER 69
           + ++   +  +GP A +LAIGTSTPPN  YQADYPD+YFR+T S+H TELKEKFKR+C++
Sbjct: 5   MEEIRQAQRAEGPAA-VLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDK 63

Query: 70  QSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVS 129
             IKKRY +LTEEILKENPN+C + APSLDARQ +++ EVPKL KEAA +AIKEWG P S
Sbjct: 64  SMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAARAIKEWGHPKS 123

Query: 130 KITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNP 189
           +ITHLIF    G+DMPGAD +L RLLGL+PSVNR M+Y QGC+ GGTV+RLAKD+AENN 
Sbjct: 124 RITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNA 183

Query: 190 GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILS 249
           GARVLVVCS+I  + F  PSE+HLD LV QA+FGDGA A I+G+D D S  E PLFQ++S
Sbjct: 184 GARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAIIVGSDPD-SATERPLFQLVS 242

Query: 250 CTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYV 309
            +QT +P++E  I G L+E+G   HL +DVP  I   + KCL +A  P+G+ DWNS+F++
Sbjct: 243 ASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWI 302

Query: 310 VHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT 369
            HPGG  +LDQVE  LGL+ EKL ASR VL EYGNM +  V FILDE+R++S E  +ATT
Sbjct: 303 AHPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATT 362

Query: 370 GEGLECGVLFGFGPGLTVETVVLQSV 395
           GEGLE GVLFGFGPGLTVET+VL+SV
Sbjct: 363 GEGLEWGVLFGFGPGLTVETIVLRSV 388

The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.

Bromheadia finlaysoniana (taxid: 41205)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	402
18376655	393	chalcone synthase [Vitis vinifera]	0.945	0.966	0.683	1e-152
3288721	393	chalcone synthase [Vitis vinifera]	0.955	0.977	0.673	1e-151
239949924	393	CHS4 [Vitis labrusca x Vitis vinifera]	0.955	0.977	0.668	1e-151
225451637	393	PREDICTED: chalcone synthase [Vitis vini	0.955	0.977	0.670	1e-151
1705846	393	RecName: Full=Chalcone synthase; AltName	0.955	0.977	0.670	1e-150
223953610	393	chalcone synthase [Vitis rotundifolia]	0.965	0.987	0.661	1e-150
116395	398	RecName: Full=Chalcone synthase; AltName	0.977	0.987	0.643	1e-148
444475577	393	chalcone synthase [Lonicera japonica]	0.960	0.982	0.659	1e-148
393793976	392	chalcone synthase C [Lilium hybrid divis	0.960	0.984	0.644	1e-147
2465406	454	chalcone synthase [Vitis vinifera]	0.922	0.817	0.680	1e-147

>gi|18376655|dbj|BAB84112.1| chalcone synthase [Vitis vinifera]

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/382 (68%), Positives = 307/382 (80%), Gaps = 2/382 (0%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
           +GP AT+LAIGT+TP NC YQADYPD+YFR+TNS+H TELKEKFKR+CE+  I KRY HL
Sbjct: 14  EGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMINKRYMHL 72

Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
           TEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQP SKITHL+F   
Sbjct: 73  TEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTT 132

Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            GVDMPGAD +L +LLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+
Sbjct: 133 SGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSE 192

Query: 200 IRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE 259
           I  + F  PS+THLD LV QA+FGDGA A IIGAD D +  E PLF+++S  QT +PD+E
Sbjct: 193 ITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPD-TKIERPLFELVSAAQTILPDSE 251

Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
             I G L+E+G   HL +DVP  I   ++K L  A  PIGISDWNSLF++ HPGG  +LD
Sbjct: 252 GAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFKPIGISDWNSLFWIAHPGGPAILD 311

Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QVE  LGL++EKL A+R+VL EYGNM +  V FILDE+RKKSIEE K TTGEGLE GVLF
Sbjct: 312 QVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGTTGEGLEWGVLF 371

Query: 380 GFGPGLTVETVVLQSVSTNFTN 401
           GFGPGLTVETVVL S++T  T+
Sbjct: 372 GFGPGLTVETVVLHSLATQSTH 393

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3288721|dbj|BAA31259.1| chalcone synthase [Vitis vinifera]

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 260/386 (67%), Positives = 309/386 (80%), Gaps = 2/386 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP AT+LAIGT+TP NC YQADYPD+YFR+TNS+H TELKEKFKR+CE+  
Sbjct: 6   EIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSM 64

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           I KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQP SKI
Sbjct: 65  INKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKI 124

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THL+F    GVDMPGAD +L +LLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+
Sbjct: 125 THLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGS 184

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVCS+I  + F  PS+THLD LV QA+FGDGA A IIGAD D +  E PLF+++S  
Sbjct: 185 RVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFELVSAA 243

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD+E  I G L+E+G   HL +DVP  I   ++K L  A +PIGISDWNSLF++ H
Sbjct: 244 QTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAH 303

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL++EKL A+R+VL EYGNM +  V FILDE+RKKSIEE KA+TGE
Sbjct: 304 PGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKASTGE 363

Query: 372 GLECGVLFGFGPGLTVETVVLQSVST 397
           GLE GVLFGFGPGLTVETVVL SVS 
Sbjct: 364 GLEWGVLFGFGPGLTVETVVLHSVSA 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|239949924|gb|ACS36661.1| CHS4 [Vitis labrusca x Vitis vinifera]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 258/386 (66%), Positives = 308/386 (79%), Gaps = 2/386 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP AT+LAIGT+TP NC YQADYPD+YFR+TNS+H TELKEKFKR+CE+  
Sbjct: 6   EIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSM 64

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           I KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQP SKI
Sbjct: 65  INKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKI 124

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THL+F    GVDMPGAD +L +LLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+
Sbjct: 125 THLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGS 184

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVC +I  + F  PS+THLD LV QA+FGDGA A IIGAD D +  E PLF+++S  
Sbjct: 185 RVLVVCPEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFELVSAA 243

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD+E  I G L+E+G   HL +DVP  I   ++K L  A +PIGISDWNSLF++ H
Sbjct: 244 QTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAH 303

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL++EKL A+R+VL EYGNM +  V FILDE+RKKSIEE KA+TGE
Sbjct: 304 PGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKASTGE 363

Query: 372 GLECGVLFGFGPGLTVETVVLQSVST 397
           GLE GVLFGFGPGLT+ETVVL SVS 
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLHSVSA 389

Source: Vitis labrusca x Vitis vinifera

Species: Vitis labrusca x Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451637|ref|XP_002276946.1| PREDICTED: chalcone synthase [Vitis vinifera] gi|122893266|gb|ABM67586.1| chalcone synthase [Vitis vinifera]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 259/386 (67%), Positives = 307/386 (79%), Gaps = 2/386 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP AT+LAIGT+TP NC YQADYPD+YFR+TNS+H TELKEKFKR+CE+  
Sbjct: 6   EIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSM 64

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           I KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQP SKI
Sbjct: 65  INKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKI 124

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THL+F    GVDMPGAD +L +LLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+
Sbjct: 125 THLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGS 184

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVCS+I  + F  PS+THLD LV QA+FGDGA A IIGAD D +  E PLF+++S  
Sbjct: 185 RVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFELVSAA 243

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD+E  I G L+E+G   HL +DVP  I   ++K L  A +PIGISDWNSLF++ H
Sbjct: 244 QTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAH 303

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL++EKL A+R+VL EYGNM +  V FILDE+RKKSIEE K +TGE
Sbjct: 304 PGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGE 363

Query: 372 GLECGVLFGFGPGLTVETVVLQSVST 397
           GLE GVLFGFGPGLTVETVVL SVS 
Sbjct: 364 GLEWGVLFGFGPGLTVETVVLHSVSA 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1705846|sp|P51090.1|CHSY_VITVI RecName: Full=Chalcone synthase; AltName: Full=Naringenin-chalcone synthase gi|499038|emb|CAA53583.1| chalcone synthase [Vitis vinifera] gi|295814493|gb|ADG35962.1| chalcone synthase [Vitis hybrid cultivar]

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 259/386 (67%), Positives = 307/386 (79%), Gaps = 2/386 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP AT+LAIGT+TP NC YQADYPD+YFR+TNS+H TELKEKFKR+CE+  
Sbjct: 6   EIRKAQRAEGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSM 64

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           I KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQP SKI
Sbjct: 65  INKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKI 124

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THL+F    GVDMPGAD +L +LLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+
Sbjct: 125 THLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGS 184

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVCS+I  + F  PS+THLD LV QA+FGDGA A IIGAD D +  E PLF+++S  
Sbjct: 185 RVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIELPLFELVSAA 243

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD+E  I G L+E+G   HL +DVP  I   ++K L  A +PIGISDWNSLF++ H
Sbjct: 244 QTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAH 303

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL++EKL A+R+VL EYGNM +  V FILDE+RKKSIEE K +TGE
Sbjct: 304 PGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGE 363

Query: 372 GLECGVLFGFGPGLTVETVVLQSVST 397
           GLE GVLFGFGPGLTVETVVL SVS 
Sbjct: 364 GLEWGVLFGFGPGLTVETVVLHSVSA 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223953610|gb|ACN30003.1| chalcone synthase [Vitis rotundifolia]

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 258/390 (66%), Positives = 311/390 (79%), Gaps = 2/390 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP AT++AIGT+TPPNC  Q+ YPD+YFR+TNS+HKTELKEKFKR+C++  
Sbjct: 6   EVRNAQRAEGP-ATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSM 64

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IKKRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQP SKI
Sbjct: 65  IKKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKI 124

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THL+F    GVDMPGAD +L +LLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN GA
Sbjct: 125 THLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGA 184

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVCS+I  + F  PS+THLD LV QA+FGDGA A IIGAD D +  E PLF+++S  
Sbjct: 185 RVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPD-TKIERPLFELVSAA 243

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD++  I G L+E+G   HL +DVP  I   ++K L  A +PIGISDWNSLF++ H
Sbjct: 244 QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFNPIGISDWNSLFWIAH 303

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL++EKL A+R+VL EYGNM +  V FILDE+RKKSIEE K TTGE
Sbjct: 304 PGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGTTGE 363

Query: 372 GLECGVLFGFGPGLTVETVVLQSVSTNFTN 401
           GLE GVLFGFGPGLTVETVVL S++T  T+
Sbjct: 364 GLEWGVLFGFGPGLTVETVVLHSLATQSTH 393

Source: Vitis rotundifolia

Species: Vitis rotundifolia

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116395|sp|P16107.1|CHSY_PETCR RecName: Full=Chalcone synthase; AltName: Full=Naringenin-chalcone synthase gi|20514|emb|CAA24779.1| unnamed protein product [Petroselinum crispum] gi|223820|prf||1001151A synthase,chalcone

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/395 (64%), Positives = 310/395 (78%), Gaps = 2/395 (0%)

Query: 7   NSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRI 66
           N+ + ++   +  QGP A ILAIGT+TP NC YQADYPD+YFR+TNS+H T+LK KFKR+
Sbjct: 6   NAEIEEIRNRQRAQGP-ANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRM 64

Query: 67  CERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQ 126
           CE+  I+KRY H+TEE LKENPN+C YEAPSLDARQ +++ EVP+LGKEAA KAIKEWGQ
Sbjct: 65  CEKSMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAASKAIKEWGQ 124

Query: 127 PVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186
           P SKITHLIF    GVDMPGAD +L +LLGL+PSV R M+Y QGC+ GGTV+RLAKD+AE
Sbjct: 125 PKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 184

Query: 187 NNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQ 246
           NN GARVLVVCS+I  + F  PS++HLD LV QA+FGDGA A I+G+D D+S  E PLFQ
Sbjct: 185 NNAGARVLVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVILGSDPDLSV-ERPLFQ 243

Query: 247 ILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL 306
           ++S  QT +PD++  I G L+E+G   HL +DVP  I   ++K L  A  PIGISDWNSL
Sbjct: 244 LISAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSL 303

Query: 307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366
           F++ HPGG  +LDQVE  LGL++EK+ A+R VL +YGNM +  V FILDE+RKKSIEE K
Sbjct: 304 FWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGK 363

Query: 367 ATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTN 401
           ATTGEGL+ GVLFGFGPGLTVETVVL SV   FT+
Sbjct: 364 ATTGEGLDWGVLFGFGPGLTVETVVLHSVPATFTH 398

Source: Petroselinum crispum

Species: Petroselinum crispum

Genus: Petroselinum

Family: Apiaceae

Order: Apiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444475577|gb|AGE10597.1| chalcone synthase [Lonicera japonica]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/388 (65%), Positives = 305/388 (78%), Gaps = 2/388 (0%)

Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  QGP AT+LAIGT+TP NC YQADYPDFYFR+T S+HK ELKEKFKR+CE+  
Sbjct: 8   EIRKAQRAQGP-ATVLAIGTATPANCVYQADYPDFYFRITKSEHKAELKEKFKRMCEKSM 66

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           I+KRY HL EEILKENP +C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQP SKI
Sbjct: 67  IRKRYMHLNEEILKENPGICEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKI 126

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THL+F    GVDMPGAD +L +LLGL+PSV RLM+Y QGC+ GGTV+RLAKD+AENN GA
Sbjct: 127 THLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGA 186

Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCT 251
           RVLVVCS+I  + F  PS+THLD LV QA+FGDGA A IIGAD D S  E PLF+++S  
Sbjct: 187 RVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDKSV-ERPLFELVSAA 245

Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT +PD++  I G L+E+G   HL +DVP  I   ++K L  A +PIGI+DWNSLF++ H
Sbjct: 246 QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFAPIGITDWNSLFWIAH 305

Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE  LGL++EKL  +R+VL EYGNM +  V FILDE+RKKSIEE KATTG+
Sbjct: 306 PGGPAILDQVEIKLGLKEEKLRPTRHVLSEYGNMSSACVLFILDELRKKSIEEGKATTGD 365

Query: 372 GLECGVLFGFGPGLTVETVVLQSVSTNF 399
           GLE GVLFGFGPGLTVETVVL SV  + 
Sbjct: 366 GLEWGVLFGFGPGLTVETVVLHSVPASI 393

Source: Lonicera japonica

Species: Lonicera japonica

Genus: Lonicera

Family: Caprifoliaceae

Order: Dipsacales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|393793976|dbj|BAM28981.1| chalcone synthase C [Lilium hybrid division I]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/388 (64%), Positives = 309/388 (79%), Gaps = 2/388 (0%)

Query: 8   SRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRIC 67
           + L ++   +  +GP AT+LAIGT+TP N  YQ++YPD+YFR+T S+H TELKEKFKR+C
Sbjct: 2   ANLDEIRQSQRAEGP-ATVLAIGTATPANMIYQSEYPDYYFRITKSEHMTELKEKFKRMC 60

Query: 68  ERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQP 127
           ++  I+KRY HL EEIL ENPNMC Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQP
Sbjct: 61  DKSMIRKRYMHLNEEILTENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQP 120

Query: 128 VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187
            SKITHL+F    GVDMPGAD +L +LLGL+PSVNRLM+Y QGC+ GGTV+RLAKD+AEN
Sbjct: 121 KSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVNRLMMYQQGCFAGGTVLRLAKDLAEN 180

Query: 188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQI 247
           N  ARVLVVCS+I  + F  P+++HLD LV QA+FGDGA A IIGAD D++  E PLFQ+
Sbjct: 181 NKSARVLVVCSEITAVTFRGPNDSHLDSLVGQALFGDGAAAIIIGADPDLAV-ERPLFQL 239

Query: 248 LSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLF 307
           +S +QT +PD+E  I G L+E+G   HL +DVP  I   ++K L+ A  P+GISDWNS+F
Sbjct: 240 VSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLTGAFQPLGISDWNSIF 299

Query: 308 YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA 367
           ++ HPGG  +LDQVE+ L LRKEK+ A+R+VL EYGNM +  V FILDE+RKKS+EE KA
Sbjct: 300 WIAHPGGPAILDQVEERLALRKEKMKATRHVLSEYGNMSSACVLFILDEMRKKSVEEGKA 359

Query: 368 TTGEGLECGVLFGFGPGLTVETVVLQSV 395
           TTGEGLE GVLFGFGPGLTVETVVL S+
Sbjct: 360 TTGEGLEWGVLFGFGPGLTVETVVLHSL 387

Source: Lilium hybrid division I

Species: Lilium hybrid cultivar

Genus: Lilium

Family: Liliaceae

Order: Liliales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2465406|gb|AAB72091.1| chalcone synthase [Vitis vinifera]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/373 (68%), Positives = 299/373 (80%), Gaps = 2/373 (0%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
           +GP AT+LAIGT+TP NC YQADYPD+YFR+TNS+H TELKEKFKR+C++  I KRY HL
Sbjct: 14  EGP-ATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHL 72

Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
            EEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQP SKITHL+F   
Sbjct: 73  NEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTT 132

Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            G DMPGAD +L +LLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+
Sbjct: 133 SGCDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSE 192

Query: 200 IRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE 259
           I  + F  PS+THLD LV QA+FGDGA A IIGAD D +  E PLF+++S  QT +PD+E
Sbjct: 193 ITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPD-TKIERPLFELVSAAQTILPDSE 251

Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
             I G L+E+G   HL +DVP  I   ++K L  A  PIGISDWNSLF++ HPGG  +LD
Sbjct: 252 GAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFKPIGISDWNSLFWIAHPGGPAILD 311

Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QVE  LGL++EKL A+R+VL EYGNM +  V FILDE+RKKSIEE K TTGEGLE GVLF
Sbjct: 312 QVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGTTGEGLEWGVLF 371

Query: 380 GFGPGLTVETVVL 392
           GFGPGLTVETVV+
Sbjct: 372 GFGPGLTVETVVV 384

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	402
UNIPROTKB|Q8RVK9	389	CHS "Naringenin-chalcone synth	0.932	0.964	0.625	1.4e-126
UNIPROTKB|Q9FUB7	390	Q9FUB7 "Chalcone synthase" [Hy	0.937	0.966	0.620	5.5e-125
TAIR|locus:2159098	395	TT4 "TRANSPARENT TESTA 4" [Ara	0.962	0.979	0.592	6.5e-122
UNIPROTKB|P30074	389	CHS2 "Chalcone synthase 2" [Me	0.932	0.964	0.599	2e-118
UNIPROTKB|D2DRC4	390	BIS2 "Biphenyl synthase 2" [So	0.942	0.971	0.595	1.7e-114
UNIPROTKB|Q27Z07	390	BIS "Biphenyl synthase" [Sorbu	0.945	0.974	0.588	1.7e-114
UNIPROTKB|D2DRC5	388	BIS3 "Biphenyl synthase 3" [So	0.947	0.981	0.572	5.9e-112
UNIPROTKB|Q8SAS8	395	Q8SAS8 "Trihydroxybenzophenone	0.925	0.941	0.553	1.7e-105
UNIPROTKB|Q8LIL0	402	LOC_Os07g17010 "Curcuminoid sy	0.957	0.957	0.445	1.8e-85
TAIR|locus:2116845	392	LAP5 "LESS ADHESIVE POLLEN 5"	0.932	0.956	0.349	6.6e-58

UNIPROTKB|Q8RVK9 CHS "Naringenin-chalcone synthase" [Cannabis sativa (taxid:3483)]

 Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
 Identities = 236/377 (62%), Positives = 290/377 (76%)

Query:    20 QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
             +GP ATI+AIGT+TP NC  Q++YPD+YFR+TNS+HKTELKEKFKR+C++  I+KRY HL
Sbjct:    14 EGP-ATIMAIGTATPANCVLQSEYPDYYFRITNSEHKTELKEKFKRMCDKSMIRKRYMHL 72

Query:    80 TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
             TEEILKENPN+C YEAPSLDARQ M++ EVPKLGKEAA KAIKEWGQP SKITHL+F   
Sbjct:    73 TEEILKENPNLCAYEAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTT 132

Query:   140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
              GVDMPGAD +L +LLGL+PSV RLM+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+
Sbjct:   133 SGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192

Query:   200 IRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTE 259
             I  + F  P++THLD LV QA+F                  E P+F+++S  QT +PD++
Sbjct:   193 ITAVTFRGPNDTHLDSLVGQALFGDGSAALIVGSDPIP-EVEKPIFELVSAAQTILPDSD 251

Query:   260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
               I G L+E+G   HL +DVP  I   ++K L+ A  P+GISDWNSLF++ HPGG  +LD
Sbjct:   252 GAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEAFKPLGISDWNSLFWIAHPGGPAILD 311

Query:   320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
             QVE  L L+ EKL A+R+VL EYGNM +  V FILDE+R+K +E+   TTGEGLE GVLF
Sbjct:   312 QVESKLALKTEKLRATRHVLSEYGNMSSACVLFILDEMRRKCVEDGLNTTGEGLEWGVLF 371

Query:   380 GFGPGLTVETVVLQSVS 396
             GFGPGLTVETVVL SV+
Sbjct:   372 GFGPGLTVETVVLHSVA 388

GO:0009715 "chalcone biosynthetic process" evidence=IDA

GO:0016210 "naringenin-chalcone synthase activity" evidence=IDA

GO:0034081 "polyketide synthase complex" evidence=IDA

GO:1901696 "cannabinoid biosynthetic process" evidence=NAS

UNIPROTKB|Q9FUB7 Q9FUB7 "Chalcone synthase" [Hypericum androsaemum (taxid:140968)]

 Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
 Identities = 235/379 (62%), Positives = 288/379 (75%)

Query:    20 QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
             +GP AT++AIGT+ PPNC  QA YPD+YFR+TNS+HK ELKEKF+R+C++  IKKRY +L
Sbjct:    14 EGP-ATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYMYL 72

Query:    80 TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
              EE+LKENPNMC Y APSLDARQ +++ EVPKLGKEAA+KAIKEWGQP SKITHL+F   
Sbjct:    73 NEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTT 132

Query:   140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
              GVDMPGAD +L +LLGL+PSV RLM+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+
Sbjct:   133 SGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192

Query:   200 IRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTE 259
             I  + F  P++THLD LV QA+F                  E PLF+++S  QT +PD+E
Sbjct:   193 ITAVTFRGPTDTHLDSLVGQALFGDGAAAIIIGSDPIP-EVEKPLFELVSAAQTILPDSE 251

Query:   260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
               I G L+E+G   HL +DVP  I   V+K L+ A  P+GISDWNSLF++ HPGG  +LD
Sbjct:   252 GAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILD 311

Query:   320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
             QVE  L L+ EKL A+R+VL EYGNM +  V FILDE+R+KS E+   TTGEG+E GVLF
Sbjct:   312 QVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGIEWGVLF 371

Query:   380 GFGPGLTVETVVLQSVSTN 398
             GFGPGLTVETVVL SV+ N
Sbjct:   372 GFGPGLTVETVVLHSVAIN 390

GO:0005575 "cellular_component" evidence=ND

GO:0009813 "flavonoid biosynthetic process" evidence=IDA

GO:0016210 "naringenin-chalcone synthase activity" evidence=IDA

TAIR|locus:2159098 TT4 "TRANSPARENT TESTA 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
 Identities = 230/388 (59%), Positives = 289/388 (74%)

Query:     8 SRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRIC 67
             S L ++   +   GP A ILAIGT+ P N   QA+YPD+YFR+TNS+H T+LKEKFKR+C
Sbjct:     7 SSLDEIRQAQRADGP-AGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMC 65

Query:    68 ERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQP 127
             ++ +I+KR+ HLTEE LKENP+MC Y APSLD RQ +++ EVPKLGKEAA+KAIKEWGQP
Sbjct:    66 DKSTIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQP 125

Query:   128 VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187
              SKITH++F    GVDMPGAD +L +LLGL+PSV RLM+Y QGC+ GGTV+R+AKD+AEN
Sbjct:   126 KSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAEN 185

Query:   188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQI 247
             N GARVLVVCS+I  + F  PS+THLD LV QA+F                  E P+F++
Sbjct:   186 NRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEM 245

Query:   248 LSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLF 307
             +S  QT +PD++  I G L+E+G   HL +DVP  I   + K L  A  P+GISDWNSLF
Sbjct:   246 VSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLF 305

Query:   308 YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA 367
             ++ HPGG  +LDQVE  LGL++EK+ A+R+VL EYGNM +  V FILDE+R+KS ++  A
Sbjct:   306 WIAHPGGPAILDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVA 365

Query:   368 TTGEGLECGVLFGFGPGLTVETVVLQSV 395
             TTGEGLE GVLFGFGPGLTVETVVL SV
Sbjct:   366 TTGEGLEWGVLFGFGPGLTVETVVLHSV 393

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009926 "auxin polar transport" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0010224 "response to UV-B" evidence=RCA;IMP

GO:0005634 "nucleus" evidence=IDA

GO:0031540 "regulation of anthocyanin biosynthetic process" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0009629 "response to gravity" evidence=IMP

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009813 "flavonoid biosynthetic process" evidence=ISS;RCA;IMP

GO:0009411 "response to UV" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009715 "chalcone biosynthetic process" evidence=IMP

GO:0016210 "naringenin-chalcone synthase activity" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IEP

UNIPROTKB|P30074 CHS2 "Chalcone synthase 2" [Medicago sativa (taxid:3879)]

 Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
 Identities = 226/377 (59%), Positives = 280/377 (74%)

Query:    20 QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
             +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  IK+RY +L
Sbjct:    14 EGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYL 72

Query:    80 TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
             TEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKITHLI    
Sbjct:    73 TEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTT 132

Query:   140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
              GVDMPGAD +L +LLGL+P V R M+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+
Sbjct:   133 SGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192

Query:   200 IRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTE 259
             +  + F  PS+THLD LV QA+F                  E P+F+++   QT  PD+E
Sbjct:   193 VTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVP-EIEKPIFEMVWTAQTIAPDSE 251

Query:   260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
               I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ HPGG  +LD
Sbjct:   252 GAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILD 311

Query:   320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
             QVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGEGLE GVLF
Sbjct:   312 QVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLF 371

Query:   380 GFGPGLTVETVVLQSVS 396
             GFGPGLT+ETVVL+SV+
Sbjct:   372 GFGPGLTIETVVLRSVA 388

GO:0009715 "chalcone biosynthetic process" evidence=IDA

GO:0016210 "naringenin-chalcone synthase activity" evidence=IDA

UNIPROTKB|D2DRC4 BIS2 "Biphenyl synthase 2" [Sorbus aucuparia (taxid:36599)]

 Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
 Identities = 228/383 (59%), Positives = 280/383 (73%)

Query:    15 TVKSNQGPT-ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIK 73
             +VK    P  A ILAIGT+ PPN +YQ DYPDF FRVT ++H+T+L+EKF RICE+   +
Sbjct:     4 SVKDQVEPQHAKILAIGTANPPNVYYQEDYPDFLFRVTKNEHRTDLREKFDRICEKSRTR 63

Query:    74 KRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITH 133
             KRY +LTEEILK NP +  Y APSLD RQ ML  EVPKLG+EAALKAIKEWGQP+SKITH
Sbjct:    64 KRYLYLTEEILKANPCIYTYGAPSLDVRQDMLNPEVPKLGQEAALKAIKEWGQPISKITH 123

Query:   134 LIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARV 193
             LIF     VDMPGAD +L++LLGL PSV R MIY  GCY G TV+RLAKD AENN GARV
Sbjct:   124 LIFCTASCVDMPGADFQLVKLLGLNPSVTRTMIYEAGCYAGATVLRLAKDFAENNEGARV 183

Query:   194 LVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQT 253
             LVVC++I  + FH  ++THLD+LV QA+F                  ESPLF+I++C QT
Sbjct:   184 LVVCAEITTVFFHGLTDTHLDILVGQALFADGASAVIVGANPEP-EIESPLFEIVACRQT 242

Query:   254 TVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI-GIS-DWNSLFYVVH 311
              +P++E+ +   ++EMG   +LS +VP  +G  V   L+     + G + DWNSLF+ VH
Sbjct:   243 IIPNSEHGVVANIREMGFNYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFSVH 302

Query:   312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
             PGG  ++DQVE+ LGL++ KL A+R+VL EYGNMGAPSV FILDE+RKKSIEE KATTGE
Sbjct:   303 PGGPAIVDQVEEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDEMRKKSIEEGKATTGE 362

Query:   372 GLECGVLFGFGPGLTVETVVLQS 394
             GLE GV+ G GPGLTVET VL+S
Sbjct:   363 GLEWGVVIGIGPGLTVETAVLRS 385

GO:0009805 "coumarin biosynthetic process" evidence=IDA

GO:0033815 "biphenyl synthase activity" evidence=IDA

GO:1901884 "4-hydroxycoumarin biosynthetic process" evidence=IDA

GO:1901886 "2-hydroxybenzoyl-CoA catabolic process" evidence=IDA

UNIPROTKB|Q27Z07 BIS "Biphenyl synthase" [Sorbus aucuparia (taxid:36599)]

 Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
 Identities = 226/384 (58%), Positives = 282/384 (73%)

Query:    16 VKSNQGPT-ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKK 74
             VK++  P  A ILAIGT+ PPN +YQ DYPDF FRVT ++H+T+L+EKF RICE+   +K
Sbjct:     5 VKNHGEPQHAKILAIGTANPPNVYYQKDYPDFLFRVTKNEHRTDLREKFDRICEKSRTRK 64

Query:    75 RYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHL 134
             RY HLTEEILK NP++  Y APSLD RQ ML  EVPKLG++AALKAIKEWGQP+SKITHL
Sbjct:    65 RYLHLTEEILKANPSIYTYGAPSLDVRQDMLNSEVPKLGQQAALKAIKEWGQPISKITHL 124

Query:   135 IFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVL 194
             IF     VDMPGAD +L++LLGL PSV R MIY  GCY G TV+RLAKD AENN GARVL
Sbjct:   125 IFCTASCVDMPGADFQLVKLLGLNPSVTRTMIYEAGCYAGATVLRLAKDFAENNEGARVL 184

Query:   195 VVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTT 254
             VVC++I  + FH  ++THLD+LV QA+F                  E PLF+I++C QT 
Sbjct:   185 VVCAEITTVFFHGLTDTHLDILVGQALFADGASAVIVGANPEP-KIERPLFEIVACRQTI 243

Query:   255 VPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI-GIS-DWNSLFYVVHP 312
             +P++E+ +   ++EMG   +LS +VP  +G  V   L+     + G + DWNSLF+ VHP
Sbjct:   244 IPNSEHGVVANIREMGFTYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFSVHP 303

Query:   313 GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEG 372
             GG  ++DQVE+ LGL++ KL A+R+VL EYGNMGAPSV FILD++RKKSIEE K+TTGEG
Sbjct:   304 GGPAIVDQVEEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDDMRKKSIEEGKSTTGEG 363

Query:   373 LECGVLFGFGPGLTVETVVLQSVS 396
             LE GV+ G GPGLTVET VL+S S
Sbjct:   364 LEWGVVIGIGPGLTVETAVLRSES 387

GO:0033815 "biphenyl synthase activity" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

GO:0052315 "phytoalexin biosynthetic process" evidence=IDA

UNIPROTKB|D2DRC5 BIS3 "Biphenyl synthase 3" [Sorbus aucuparia (taxid:36599)]

 Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
 Identities = 220/384 (57%), Positives = 276/384 (71%)

Query:    13 MTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSI 72
             M  V  N+   A ILAIGT+ PPN F+Q DYPDF FRVT ++H+T+L+EKF RICE+   
Sbjct:     1 MAPVVKNEPQHAKILAIGTANPPNVFHQKDYPDFLFRVTKNEHRTDLREKFDRICEKSRT 60

Query:    73 KKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT 132
             KKRY HLTEE+LK NPN+  Y APSL+ RQ +   EVPKLG+EA+LKAIKEWGQP+SKIT
Sbjct:    61 KKRYLHLTEEMLKANPNIYTYGAPSLNVRQDICNIEVPKLGQEASLKAIKEWGQPISKIT 120

Query:   133 HLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGAR 192
             HLIF     VDMPG D +L++LLGL PSV R MIY  GCY G TV+R+AKD AENN GAR
Sbjct:   121 HLIFCTASCVDMPGCDFQLIKLLGLDPSVTRTMIYEAGCYAGATVLRMAKDFAENNKGAR 180

Query:   193 VLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQ 252
             VLVVC++I  + FH  ++THLD+LV QA+F                  E PLF+I++C Q
Sbjct:   181 VLVVCAEITTVFFHGLTDTHLDILVGQALFADGASAVIVGANPEP-EIERPLFEIVACRQ 239

Query:   253 TTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI-GIS-DWNSLFYVV 310
             T +P++E+ +   ++EMG   +LS DVP  +G  V   ++     + G + DWNSLF+ V
Sbjct:   240 TILPNSEHGVVANIREMGFNYYLSGDVPKFVGGNVVDFMTKTFEKVDGKNKDWNSLFFSV 299

Query:   311 HPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTG 370
             HPGG  ++DQVE+ LGL++ KL A+R+VL EYGNMGAP+V FILDE+R KSIEE K TTG
Sbjct:   300 HPGGPAIVDQVEEKLGLKEGKLRATRHVLSEYGNMGAPTVHFILDEMRNKSIEEGKTTTG 359

Query:   371 EGLECGVLFGFGPGLTVETVVLQS 394
             EGLE GV+ G GPGLTVET VL+S
Sbjct:   360 EGLEWGVVIGIGPGLTVETAVLRS 383

GO:0009805 "coumarin biosynthetic process" evidence=IDA

GO:0033815 "biphenyl synthase activity" evidence=IDA

GO:1901884 "4-hydroxycoumarin biosynthetic process" evidence=IDA

GO:1901886 "2-hydroxybenzoyl-CoA catabolic process" evidence=IDA

UNIPROTKB|Q8SAS8 Q8SAS8 "Trihydroxybenzophenone synthase" [Hypericum androsaemum (taxid:140968)]

 Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
 Identities = 206/372 (55%), Positives = 258/372 (69%)

Query:    24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
             A++LAIGT+ P +   Q DYPDFYFR TNS+H TELKEKFKRIC +  I+KR+F+LTEEI
Sbjct:    20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEI 79

Query:    84 LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
             LKEN  +  Y A SLDARQ +L  EVPKLG+EAALKAI EWGQP+SKITH++F+   G  
Sbjct:    80 LKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFM 139

Query:   144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
             MPGAD  + RLLGL  +V R+M+Y QGC+ GGT +R+AKD+AENN GARVLVVC++   +
Sbjct:   140 MPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAENNEGARVLVVCAENTAM 199

Query:   204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
              FH P+E+HLDV+V QA+F                + E  +F ILS +QT VP ++  I+
Sbjct:   200 TFHAPNESHLDVIVGQAMFSDGAAALIIGACPDVASGERAVFNILSASQTIVPGSDGAIT 259

Query:   264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEK 323
                 EMG    L  DV     + +   +  A SP+G+SDWNSLFY +HPGG G++D V  
Sbjct:   260 AHFYEMGMSYFLKEDVIPLFRDNIAAVMEEAFSPLGVSDWNSLFYSIHPGGRGIIDGVAG 319

Query:   324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP 383
              LG++ E L A+R+VL EYGNMG+  V FILDE+RK S    K TTG+G E G L G GP
Sbjct:   320 NLGIKDENLVATRHVLGEYGNMGSACVMFILDELRKSSKVNGKPTTGDGKEFGCLIGLGP 379

Query:   384 GLTVETVVLQSV 395
             GLTVE VVLQSV
Sbjct:   380 GLTVEAVVLQSV 391

GO:0005575 "cellular_component" evidence=ND

GO:0009699 "phenylpropanoid biosynthetic process" evidence=IDA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IDA

GO:0047181 "benzophenone synthase activity" evidence=IDA

UNIPROTKB|Q8LIL0 LOC_Os07g17010 "Curcuminoid synthase" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
 Identities = 176/395 (44%), Positives = 244/395 (61%)

Query:     8 SRLYDMTTVKSNQGPT--ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKR 65
             S LY +  ++ +Q     A +LAIGT+ PPNC  Q ++PDFYFRVTNSDH T LK+KFKR
Sbjct:     9 SALYPLGEMRRSQRADGLAAVLAIGTANPPNCVTQEEFPDFYFRVTNSDHLTALKDKFKR 68

Query:    66 ICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWG 125
             IC+   +++RY H TEE+L  +P     +APSLDAR  +  D VP+L  EAA KAI EWG
Sbjct:    69 ICQEMGVQRRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWG 128

Query:   126 QPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185
             +P + ITHL+ +   G  +PG D RL+ LLGL+PSV R M++  GC+ G   +RLAKD+A
Sbjct:   129 RPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLA 188

Query:   186 ENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLF 245
             EN+ GARVLVV +++ ++ F  P E     L+VQ +F                  E PLF
Sbjct:   189 ENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDV--ERPLF 246

Query:   246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI----GIS 301
             +I+S  QT +P++++ ++ +  E      L R VP  IG+ V++CL +   P+    G  
Sbjct:   247 EIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGG 306

Query:   302 DWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKS 361
              WN LF+ VHPG   ++DQV+  LGL   KL ASR VL +YGNM   +V F LDE+R++ 
Sbjct:   307 GWNDLFWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQR 366

Query:   362 IEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396
              E   A  GE  E GV+  FGPG+TV+ ++L + S
Sbjct:   367 KEA--AAAGEWPELGVMMAFGPGMTVDAMLLHATS 399

GO:0009813 "flavonoid biosynthetic process" evidence=IDA

GO:0042802 "identical protein binding" evidence=IPI

TAIR|locus:2116845 LAP5 "LESS ADHESIVE POLLEN 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
 Identities = 133/381 (34%), Positives = 214/381 (56%)

Query:    17 KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRY 76
             KSN G  ATILA+G + P     Q    D YF+ T  D   ELK+K  R+C+  ++K RY
Sbjct:    14 KSNPGK-ATILALGKAFPHQLVMQEYLVDGYFKTTKCDDP-ELKQKLTRLCKTTTVKTRY 71

Query:    77 FHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIF 136
               ++EEILK+ P +      ++  R  +  D V ++  EA+   IK WG+ +S ITH+++
Sbjct:    72 VVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISDITHVVY 131

Query:   137 SAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVV 196
              +     +PG D+ L + LGL P  +R+++Y  GC  G   +R+AKDIAENNPG+RVL+ 
Sbjct:   132 VSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLA 191

Query:   197 CSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVP 256
              S+  ++ F  PS      LV  A+F                  E PLF++ +  Q  +P
Sbjct:   192 TSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPIC-EKPLFELHTAIQNFLP 250

Query:   257 DTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS--DWNSLFYVVHPGG 314
             +TE  I G+L E G    LSR++P  I + V+      +   G++  ++N +F+ VHPGG
Sbjct:   251 ETEKTIDGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKNYNQMFWAVHPGG 310

Query:   315 DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLE 374
               +L+++EK L L  EKL  SR  L +YGN  + S+ ++L+ + ++S ++++    E  E
Sbjct:   311 PAILNRIEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEES-KKVRNMNEEENE 369

Query:   375 CGVLFGFGPGLTVETVVLQSV 395
              G++  FGPG+T E ++ +++
Sbjct:   370 WGLILAFGPGVTFEGIIARNL 390

GO:0005737 "cytoplasm" evidence=ISM

GO:0009699 "phenylpropanoid biosynthetic process" evidence=ISS

GO:0010584 "pollen exine formation" evidence=RCA;IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0030639 "polyketide biosynthetic process" evidence=IDA

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

GO:0090439 "tetraketide alpha-pyrone synthase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q41436	CHSA_SOLTU	2, ., 3, ., 1, ., 7, 4	0.6666	0.9353	0.9665	N/A	no
Q9XGX1	CHS7_SORBI	2, ., 3, ., 1, ., 7, 4	0.64	0.9278	0.9325	N/A	no
P51090	CHSY_VITVI	2, ., 3, ., 1, ., 7, 4	0.6709	0.9552	0.9770	yes	no
Q9XGX2	CHS1_SORBI	2, ., 3, ., 1, ., 7, 4	0.6346	0.9278	0.9301	N/A	no
P51075	CHSY_BETPN	2, ., 3, ., 1, ., 7, 4	0.6458	0.9502	0.9670	N/A	no
Q9ZS40	CHS2_DAUCA	2, ., 3, ., 1, ., 7, 4	0.6329	0.9776	0.9899	N/A	no
O04111	CHSY_PERFR	2, ., 3, ., 1, ., 7, 4	0.6201	0.9577	0.9846	N/A	no
Q9SBL7	CHS2_SORBI	2, ., 3, ., 1, ., 7, 4	0.6426	0.9278	0.9301	N/A	no
Q9SBL6	CHS3_SORBI	2, ., 3, ., 1, ., 7, 4	0.64	0.9278	0.9301	N/A	no
Q9SBL5	CHS4_SORBI	2, ., 3, ., 1, ., 7, 4	0.64	0.9278	0.9301	N/A	no
Q9SBL4	CHS5_SORBI	2, ., 3, ., 1, ., 7, 4	0.64	0.9278	0.9301	N/A	no
Q9SBL3	CHS6_SORBI	2, ., 3, ., 1, ., 7, 4	0.64	0.9278	0.9301	N/A	no
P51082	CHSB_PEA	2, ., 3, ., 1, ., 7, 4	0.6321	0.9552	0.9871	N/A	no
Q9ZRR8	CHS1_CASGL	2, ., 3, ., 1, ., 7, 4	0.6481	0.9353	0.9665	N/A	no
P48392	CHS3_GERHY	2, ., 3, ., 1, ., 7, 4	0.6345	0.9676	0.9652	N/A	no
P08894	CHSA_PETHY	2, ., 3, ., 1, ., 7, 4	0.6534	0.9353	0.9665	N/A	no
P48390	CHS1_GERHY	2, ., 3, ., 1, ., 7, 4	0.6301	0.9626	0.9723	N/A	no
Q43188	CHS2_SOLTU	2, ., 3, ., 1, ., 7, 4	0.6481	0.9353	0.9665	N/A	no
O23729	CHS3_BROFI	2, ., 3, ., 1, ., 7, 4	0.6321	0.9552	0.9746	N/A	no
Q43163	CHSB_SOLTU	2, ., 3, ., 1, ., 7, 4	0.6666	0.9353	0.9665	N/A	no
Q9MB36	CHS8_IPOBA	2, ., 3, ., 1, ., 7, 4	0.6428	0.9328	0.9664	N/A	no
A2ZEX7	CHS1_ORYSI	2, ., 3, ., 1, ., 7, 4	0.6329	0.9303	0.9396	N/A	no
O22652	CHSY_RAPSA	2, ., 3, ., 1, ., 7, 4	0.6205	0.9676	0.9873	N/A	no
Q9FSB9	CHS1_RUTGR	2, ., 3, ., 1, ., 7, 4	0.6506	0.9278	0.9491	N/A	no
Q9FSB8	CHS2_RUTGR	2, ., 3, ., 1, ., 7, 4	0.6304	0.9577	0.9796	N/A	no
Q9SEP4	CHSY_ARAAL	2, ., 3, ., 1, ., 7, 4	0.6243	0.9577	0.9846	N/A	no
Q9MB37	CHS7_IPOBA	2, ., 3, ., 1, ., 7, 4	0.6380	0.9477	0.9694	N/A	no
Q8RVK9	CHS_CANSA	2, ., 3, ., 1, ., 7, 4	0.6472	0.9328	0.9640	N/A	no
Q9FUB7	CHSY_HYPAN	2, ., 3, ., 1, ., 7, 4	0.6464	0.9378	0.9666	N/A	no
O82144	CHSY_HYDMC	2, ., 3, ., 1, ., 7, 4	0.6507	0.9353	0.9665	N/A	no
Q9MB38	CHS6_IPOBA	2, ., 3, ., 1, ., 7, 4	0.6462	0.9278	0.9491	N/A	no
Q9SEP2	CHSY_CARAN	2, ., 3, ., 1, ., 7, 4	0.6269	0.9577	0.9746	N/A	no
P24825	CHS2_MAIZE	2, ., 3, ., 1, ., 7, 4	0.64	0.9278	0.9325	N/A	no
P16107	CHSY_PETCR	2, ., 3, ., 1, ., 7, 4	0.6430	0.9776	0.9874	N/A	no
P53415	CHS2_SECCE	2, ., 3, ., 1, ., 7, 4	0.6303	0.9303	0.9492	N/A	no
P48388	CHS3_CAMSI	2, ., 3, ., 1, ., 7, 4	0.6476	0.9552	0.9871	N/A	no
P13417	CHS3_SINAL	2, ., 3, ., 1, ., 7, 4	0.6237	0.9626	0.9797	N/A	no
P13416	CHS1_SINAL	2, ., 3, ., 1, ., 7, 4	0.6262	0.9626	0.9797	N/A	no
Q9ZRS4	CHSY_CATRO	2, ., 3, ., 1, ., 7, 4	0.6389	0.9527	0.9845	N/A	no
P48385	CHSY_CALCH	2, ., 3, ., 1, ., 7, 4	0.6396	0.9477	0.9572	N/A	no
P48387	CHS2_CAMSI	2, ., 3, ., 1, ., 7, 4	0.6428	0.9353	0.9665	N/A	no
P48386	CHS1_CAMSI	2, ., 3, ., 1, ., 7, 4	0.6424	0.9552	0.9871	N/A	no
Q2R3A1	CHS1_ORYSJ	2, ., 3, ., 1, ., 7, 4	0.6356	0.9303	0.9396	yes	no
P22928	CHSJ_PETHY	2, ., 3, ., 1, ., 7, 4	0.6534	0.9353	0.9665	N/A	no
O22047	CHSE_IPOPU	2, ., 3, ., 1, ., 7, 4	0.6534	0.9353	0.9665	N/A	no
O22046	CHSE_IPONI	2, ., 3, ., 1, ., 7, 4	0.6560	0.9353	0.9665	N/A	no
O23730	CHS4_BROFI	2, ., 3, ., 1, ., 7, 4	0.6321	0.9552	0.9746	N/A	no
O23731	CHS8_BROFI	2, ., 3, ., 1, ., 7, 4	0.6321	0.9552	0.9746	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gVvCHS1	RecName- Full=Chalcone synthase; EC=2.3.1.74; AltName- Full=Naringenin-chalcone synthase;; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin (By similarity) (393 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	MYBA1	SubName- Full=Chromosome chr2 scaffold_97, whole genome shotgun sequence; (174 aa)							•		0.483
	F3H	RecName- Full=Naringenin,2-oxoglutarate 3-dioxygenase; EC=1.14.11.9; AltName- Full=Flavonone-3- [...] (363 aa)							•		0.483
	GSVIVG00024561001	SubName- Full=Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgu [...] (717 aa)							•		0.483
	GSVIVG00023211001	SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (710 aa)							•		0.483
	GSVIVG00018175001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (723 aa)							•		0.483
	GSVIVG00016500001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (752 aa)							•		0.483
	GSVIVG00016492001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (797 aa)							•		0.483
	GSVIVG00016489001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (766 aa)							•		0.483
	UFGT	SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (457 aa)							•		0.483
	4CL	SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (378 aa)							•		0.483

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	402
PLN03172	393	PLN03172, PLN03172, chalcone synthase family prote	0.0
PLN03173	391	PLN03173, PLN03173, chalcone synthase; Provisional	0.0
PLN03170	401	PLN03170, PLN03170, chalcone synthase; Provisional	0.0
pfam00195	227	pfam00195, Chal_sti_synt_N, Chalcone and stilbene	1e-142
PLN03171	399	PLN03171, PLN03171, chalcone synthase-like protein	1e-141
PLN03168	389	PLN03168, PLN03168, chalcone synthase; Provisional	1e-137
cd00831	361	cd00831, CHS_like, Chalcone and stilbene synthases	1e-135
PLN03169	391	PLN03169, PLN03169, chalcone synthase family prote	1e-106
pfam02797	151	pfam02797, Chal_sti_synt_C, Chalcone and stilbene	3e-77
COG3424	356	COG3424, BcsA, Predicted naringenin-chalcone synth	2e-54
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	9e-44
cd00825	332	cd00825, decarbox_cond_enzymes, decarboxylating co	1e-37
cd00827	324	cd00827, init_cond_enzymes, "initiating" condensin	9e-31
COG0332	323	COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein]	2e-14
cd00830	320	cd00830, KAS_III, Ketoacyl-acyl carrier protein sy	9e-14
CHL00203	326	CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn	7e-11
COG3425	377	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synt	1e-09
TIGR00747	318	TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein)	2e-08
PLN00415	466	PLN00415, PLN00415, 3-ketoacyl-CoA synthase	2e-06
pfam08541	90	pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-	3e-06
PRK12879	325	PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei	6e-06
TIGR01835	379	TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylgluta	6e-05
PLN02326	379	PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protei	9e-05
pfam08545	80	pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-pr	1e-04
PLN02377	502	PLN02377, PLN02377, 3-ketoacyl-CoA synthase	5e-04
PRK09352	319	PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei	0.003
PLN02932	478	PLN02932, PLN02932, 3-ketoacyl-CoA synthase	0.004

>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional

 Score =  548 bits (1414), Expect = 0.0
 Identities = 253/377 (67%), Positives = 299/377 (79%), Gaps = 2/377 (0%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
           +GP ATILAIG +TP NC  QADYPD+YFR+TNS+H TELKEKFKR+C++  IKKRY HL
Sbjct: 14  EGP-ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHL 72

Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
           TEEILKENPNMC Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQP SKITHL+F   
Sbjct: 73  TEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTT 132

Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            GVDMPGAD +L +LLGLKPSV R M+Y QGC+ GGTV+RLAKD+AENN G+RVLVVCS+
Sbjct: 133 SGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSE 192

Query: 200 IRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE 259
           I  + F  PS+THLD LV QA+FGDGA A IIGAD D    E PLF+I+S  QT +PD++
Sbjct: 193 ITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEIVSAAQTILPDSD 251

Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
             I G L+E+G   HL +DVP  I   ++K L  A +PIGI+DWNS+F++ HPGG  +LD
Sbjct: 252 GAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGGPAILD 311

Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QVE  L L++EKL A+R+VL +YGNM +  V FILDE+RKKSIEE K +TGEGLE GVLF
Sbjct: 312 QVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLF 371

Query: 380 GFGPGLTVETVVLQSVS 396
           GFGPGLTVETVVL SV 
Sbjct: 372 GFGPGLTVETVVLHSVP 388

Length = 393

>gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional

 Score =  529 bits (1363), Expect = 0.0
 Identities = 248/378 (65%), Positives = 297/378 (78%), Gaps = 2/378 (0%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
           +GP ATI+AIGTSTPPNC  Q+ YPD+YFR+TNS+HK ELKEKFKR+CE+  IKKRY HL
Sbjct: 14  EGP-ATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHL 72

Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
           TEEILKENP++C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQP SKITHL+F   
Sbjct: 73  TEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTT 132

Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            GVDMPGAD +L +LLGL+ SV R M+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+
Sbjct: 133 SGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192

Query: 200 IRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE 259
           I  + F  PS+THLD LV QA+FGDGA A IIG+D  +   E PLF+++S  QT +PD++
Sbjct: 193 ITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDP-VLGVEKPLFELVSAAQTILPDSD 251

Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
             I G L+E+G   HL +DVP  I   V+K L+ A  P+GISDWNSLF++ HPGG  +LD
Sbjct: 252 GAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILD 311

Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QVE  L L+ EKL A+R+VL EYGNM +  V FILDE+RKKS E+   +TGEGLE GVLF
Sbjct: 312 QVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLF 371

Query: 380 GFGPGLTVETVVLQSVST 397
           GFGPGLTVETVVL SV+ 
Sbjct: 372 GFGPGLTVETVVLHSVAP 389

Length = 391

>gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional

 Score =  527 bits (1358), Expect = 0.0
 Identities = 240/376 (63%), Positives = 297/376 (78%), Gaps = 2/376 (0%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
            GP AT+LAIGT+TP NC +QADYPD+YFR+T S+H TELKEKFKR+C++  I+KRY HL
Sbjct: 18  TGP-ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHL 76

Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
           TEE L ENPNMC Y APSLDARQ +++ EVPKLGK AA KAIKEWGQP SKITHL+F   
Sbjct: 77  TEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTT 136

Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            GVDMPGAD +L ++LGL+PSVNRLM+Y QGC+ GGTV+R+AKD+AENN GARVLVVCS+
Sbjct: 137 SGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSE 196

Query: 200 IRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE 259
           I  + F  PSE+HLD +V QA+FGDGA A I+GAD D    E PLFQ++S +QT +PD+E
Sbjct: 197 ITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPD-ERVERPLFQLVSASQTILPDSE 255

Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
             I G L+E+G   HL +DVP  I   +++ L  A  P+GI+D+NS+F+V HPGG  +LD
Sbjct: 256 GAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILD 315

Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QVE  +GL KE++ A+R+VL EYGNM +  V FILDE+RK+S E+ +ATTGEG + GVLF
Sbjct: 316 QVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLF 375

Query: 380 GFGPGLTVETVVLQSV 395
           GFGPGLTVETVVL SV
Sbjct: 376 GFGPGLTVETVVLHSV 391

Length = 401

>gnl|CDD|201072 pfam00195, Chal_sti_synt_N, Chalcone and stilbene synthases, N-terminal domain

 Score =  402 bits (1036), Expect = e-142
 Identities = 153/216 (70%), Positives = 178/216 (82%), Gaps = 1/216 (0%)

Query: 19  NQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFH 78
            +GP ATILAIGT+TP NC  Q+ YPD+YFRVT S+H T+LKEKF+RICE+ +IKKRY  
Sbjct: 12  AEGP-ATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMV 70

Query: 79  LTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSA 138
           LTEEILKENP +C   APSLDARQ + + EVPKLGKEAALKAIKEWGQP SKITHL+F  
Sbjct: 71  LTEEILKENPELCTEMAPSLDARQDIAVVEVPKLGKEAALKAIKEWGQPKSKITHLVFCT 130

Query: 139 FYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCS 198
             GVDMPGAD +L +LLGL+PSV R+M+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS
Sbjct: 131 TSGVDMPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLAKDLAENNKGARVLVVCS 190

Query: 199 DIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAD 234
           +I  + F  PSETHLD LV QA+FGDGA A IIG+D
Sbjct: 191 EITAVTFRGPSETHLDSLVGQALFGDGAAAVIIGSD 226

The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain. Length = 227

>gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional

 Score =  406 bits (1045), Expect = e-141
 Identities = 185/395 (46%), Positives = 255/395 (64%), Gaps = 10/395 (2%)

Query: 8   SRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRIC 67
           + L ++   +   G  A +LAIGT+ P NC  Q ++PDFYFR T SDH T LK+KFKRIC
Sbjct: 8   ANLGEICRAQRADGLAA-VLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRIC 66

Query: 68  ERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQP 127
           +   ++KRY H TEE+L  +P    ++APSLDAR  +  D VP+L  EAA KAI EWG+P
Sbjct: 67  QELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRP 126

Query: 128 VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187
            + ITHL+ +   G  +PG D RL+ LLGL+PSV R M++  GC+ G   +RLAKD+AEN
Sbjct: 127 AADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAEN 186

Query: 188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQI 247
           N GARVLVV ++I +L F+ P E     L+ Q +FGDGA A I+GAD+D +  E PLF+I
Sbjct: 187 NRGARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA--ERPLFEI 244

Query: 248 LSCTQTTVPDTENYISGQLKEMGTYCHLS-RDVPVAIGNYVDKCLSNAMSP----IGISD 302
           +S  Q  +P++++ I+    E G   ++  R VP  IG+ +++CL +A +P     G ++
Sbjct: 245 VSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAE 304

Query: 303 WNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSI 362
           WN LF+ VHPG   +LDQV+  LGL  EKL ASR VL +YGNM   +V F LDE+R++  
Sbjct: 305 WNDLFWAVHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQ-- 362

Query: 363 EEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST 397
            E  A  G   E GV+  FGPGLTV+ ++L +   
Sbjct: 363 MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASGH 397

Length = 399

>gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional

 Score =  398 bits (1023), Expect = e-137
 Identities = 185/378 (48%), Positives = 257/378 (67%), Gaps = 2/378 (0%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
           +GP A +L IGT+ PP  F Q++YPDF+F +TN   K  LK KFKRIC++  I+KR+  L
Sbjct: 13  EGP-ACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFL 71

Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
           TEE+LK NP +C Y  PSL+ R  +++ +VPKL  EAA KAIKEWG   S ITH++F+  
Sbjct: 72  TEEVLKANPGICTYMEPSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATT 131

Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            GV+MPGAD  L +LLGLKP+V R+M+Y  GC+ G +V+R+AKD+AENN GARVL V S+
Sbjct: 132 SGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASE 191

Query: 200 IRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE 259
           +  + +  PSE HLD LV  A+FGDGAG  ++G+D      E  LF++    +T +P+++
Sbjct: 192 VTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPK-PEVEKALFEVHWAGETILPESD 250

Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
             I G L E G   HL +DVP  I   ++K L+ A   +G  DWN +F+ VHPGG  +LD
Sbjct: 251 GAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILD 310

Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QVE  L L K+K+  SR +L E+GNM + SV F+LD++R++S++   +T GEG E G   
Sbjct: 311 QVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFI 370

Query: 380 GFGPGLTVETVVLQSVST 397
           GFGPGLT+E +VL++ + 
Sbjct: 371 GFGPGLTLEVLVLRAAAN 388

Length = 389

>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

 Score =  390 bits (1005), Expect = e-135
 Identities = 149/374 (39%), Positives = 204/374 (54%), Gaps = 17/374 (4%)

Query: 23  TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLT-- 80
            ATILAIGT+ PP+   Q++  DFY R+ +SDH  ELKEK KR+C +  I+ RY  L   
Sbjct: 1   AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGG 60

Query: 81  EEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFY 140
           EE     P M    +PSLD R  + ++E  +L +EAA  A+ E G   S I HL+ +   
Sbjct: 61  EETYAPRPEM----SPSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTST 116

Query: 141 GVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 200
           G   P  D  L+  LGL+P V R  +   GC  G   + LAKD+ E NPGARVLVV +++
Sbjct: 117 GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTEL 176

Query: 201 RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTEN 260
             L +  P   H  +LV  A+FGDGA A ++  D      E PLF+++    T +PD+E+
Sbjct: 177 CSLWYRGPD--HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED 234

Query: 261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSP--IGISDWNSLFYVVHPGGDGLL 318
            +   L E G    LSRDVP  +   +++ L   ++   IG+       + VHPGG  +L
Sbjct: 235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVL 294

Query: 319 DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVL 378
           D VEK LGL  E L ASR VLR YGNM + SV ++L  +  K          +  + G+L
Sbjct: 295 DAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRV-------KRGDRGLL 347

Query: 379 FGFGPGLTVETVVL 392
             FGPG T E+ V 
Sbjct: 348 IAFGPGFTCESAVW 361

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. Length = 361

>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional

 Score =  318 bits (816), Expect = e-106
 Identities = 152/381 (39%), Positives = 223/381 (58%), Gaps = 9/381 (2%)

Query: 17  KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRY 76
            +N G  ATILA+G + P     Q    D YFR T  D    LKEK +R+C+  ++K RY
Sbjct: 16  AANPG-KATILALGKAFPSQLVPQEYLVDGYFRDTKCD-DPALKEKLERLCKTTTVKTRY 73

Query: 77  FHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIF 136
             +++EIL + P +     P++  R  +  + V ++  EA+L  IKEWG+PVS ITHL++
Sbjct: 74  VVMSKEILDKYPELATEGTPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVY 133

Query: 137 SAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVV 196
            +     +PG D+ L + LGL P V R+M+Y  GC  G   +R+AKDIAENNPG+RVL+ 
Sbjct: 134 VSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLT 193

Query: 197 CSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVP 256
            S+  +L F  PS      LV  A+FGDGA A IIGAD  I   ESP F++ +  Q  +P
Sbjct: 194 TSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADP-IPVSESPFFELHTAIQQFLP 252

Query: 257 DTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS--DWNSLFYVVHPGG 314
            TE  I G+L E G    L R++P  I + ++      M   G+   D+N LF+ VHPGG
Sbjct: 253 GTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG 312

Query: 315 DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLE 374
             +L+++EK L L  EKL  SR  L +YGN+ + ++ ++L+ +R    EE+K    E  E
Sbjct: 313 PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR----EELKKKGEEDEE 368

Query: 375 CGVLFGFGPGLTVETVVLQSV 395
            G++  FGPG+T E ++ +++
Sbjct: 369 WGLILAFGPGITFEGILARNL 389

Length = 391

>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain

 Score =  235 bits (601), Expect = 3e-77
 Identities = 91/151 (60%), Positives = 115/151 (76%)

Query: 246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNS 305
           +++S  QT +PD++  I G L+E G   HL +DVP  I   ++KCL  A  P+GISDWNS
Sbjct: 1   ELVSAAQTFLPDSDGAIDGHLREEGLTFHLLKDVPQLISKNIEKCLVEAFDPLGISDWNS 60

Query: 306 LFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEM 365
           +F++ HPGG  +LDQVE  LGL+ EKL ASR+VL EYGNM +  V FILDE+RKKS+++ 
Sbjct: 61  IFWIAHPGGPAILDQVEAKLGLKPEKLRASRHVLSEYGNMSSACVLFILDEMRKKSLKKG 120

Query: 366 KATTGEGLECGVLFGFGPGLTVETVVLQSVS 396
           K+TTGEGLE GVLFGFGPGLTVETVVL+SV 
Sbjct: 121 KSTTGEGLEWGVLFGFGPGLTVETVVLRSVP 151

This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. Length = 151

>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  183 bits (466), Expect = 2e-54
 Identities = 105/380 (27%), Positives = 173/380 (45%), Gaps = 38/380 (10%)

Query: 23  TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQ-----SIKKRYF 77
            A I ++ T+ PP  + Q++       +T+S  +   +E  + I  R       I +R+ 
Sbjct: 1   MAVIASVATALPPYRYNQSE-------ITDSFAELPFQEGREDI-PRVLHANAQINRRHL 52

Query: 78  HLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFS 137
            L  +  +E              +  + I+E   LG +A  +A+         I  ++  
Sbjct: 53  VLPLDWYRE--------PHGFGEKNEIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTV 104

Query: 138 AFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVC 197
              G+  P  D R++  LGL P   R+ ++  GC  G   +  A+D     P A VLVVC
Sbjct: 105 TSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVC 164

Query: 198 SDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPD 257
            ++  L +    +T  + LV  A+FGDGA A ++  D            IL    T  PD
Sbjct: 165 VELCSLTYVFADDTKSN-LVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPD 223

Query: 258 TENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI----GISDWNSLFYVVHPG 313
           +E+ +   + + G    LSRD+P    N ++  L+  ++      G+S  +   +VVHPG
Sbjct: 224 SEDIMGWDVGDQGLKVVLSRDLP----NLIESYLAPNVTTFLATHGLSIEDIEAWVVHPG 279

Query: 314 GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGL 373
           G  ++D  E++LGL  E L  S  VLREYGNM + +V F+L++  +K+ +          
Sbjct: 280 GPKVIDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKAPKSG-------- 331

Query: 374 ECGVLFGFGPGLTVETVVLQ 393
             G++F  GPG   E V+L 
Sbjct: 332 SRGLMFAMGPGFCSELVLLD 351

Length = 356

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score =  152 bits (386), Expect = 9e-44
 Identities = 69/288 (23%), Positives = 101/288 (35%), Gaps = 44/288 (15%)

Query: 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD-MPGADVRLMRLLGLKPSVNRLMIY 167
             +LG EAA +AI + G     I  +I     G     GA  +L   LG+        + 
Sbjct: 7   ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI-SGGPAYSVN 65

Query: 168 TQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAG 227
            Q C  G T + LA    +N     VL   S+                     VFGDGA 
Sbjct: 66  -QACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------FVFGDGAA 105

Query: 228 AAIIGADSDISNHES-PLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNY 286
           AA++ ++       + P  +I+S   T    +                    VP   G  
Sbjct: 106 AAVVESEEHALRRGAHPQAEIVSTAATFDGASM-------------------VPAVSGEG 146

Query: 287 VDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKL--WASRYVLREYGN 344
           + +    A+   G++  +  +   H  G  + D VE  LGL  + +   A    L   G+
Sbjct: 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGH 206

Query: 345 MGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392
               +   ILDE+      E    T       +L GFG G T   VVL
Sbjct: 207 PLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

 Score =  138 bits (349), Expect = 1e-37
 Identities = 63/343 (18%), Positives = 98/343 (28%), Gaps = 80/343 (23%)

Query: 109 VPKLGKEAALKAIKEWG----QPVSKITHLIFSAFYGVD--------------------- 143
           V  LG EAA +AI + G       + I  ++     G                       
Sbjct: 11  VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKA 70

Query: 144 -MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
             PGA  ++   LG+        +    C      + LA D  +N     VL   S+   
Sbjct: 71  MFPGASGQIATPLGIH--GPAYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELA 127

Query: 203 LDFHEPSET------------HLDVLVVQAVFGDGAGAAIIGADSD-ISNHESPLFQILS 249
                  +               D      VFGDGAGA ++      ++       +I+ 
Sbjct: 128 APMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVG 187

Query: 250 CTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYV 309
              T                                 + +    A++  G++ W+  + V
Sbjct: 188 TAATIDGAG------------------MGAFAPSAEGLARAAKEALAVAGLTVWDIDYLV 229

Query: 310 VHPGGDGLLDQVEKTLGLR--KEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA 367
            H  G  + D  E  L      +K  A        GN+ + +V   +DE           
Sbjct: 230 AHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIP 289

Query: 368 ------------------TTGEGLECGVLFGFGPGLTVETVVL 392
                             TT   L   +L GFG G T  T+VL
Sbjct: 290 PSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332

>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

 Score =  119 bits (301), Expect = 9e-31
 Identities = 86/376 (22%), Positives = 123/376 (32%), Gaps = 64/376 (17%)

Query: 26  ILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILK 85
           I AIG   P       +  +                          I +R+    +E   
Sbjct: 4   IEAIGAYLPRYRVDNEELAEGLGVDPGKYTT--------------GIGQRHMAGDDED-- 47

Query: 86  ENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD-M 144
                                  VP +  EAA +A++  G     I  LI +    +D  
Sbjct: 48  -----------------------VPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKG 84

Query: 145 PGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD 204
             A   L  LLGL        +  Q CY G   ++LA ++ E+ P    LVV SDI    
Sbjct: 85  KSAATYLAELLGLTN-AEAFDL-KQACYGGTAALQLAANLVESGPWRYALVVASDIASYL 142

Query: 205 FHEPSETHLDVLVVQAVFGDGAGAAIIGADSDI-SNHESPLFQILSCTQTTVP------D 257
             E S         +   GDGA A ++  +  I +                 P       
Sbjct: 143 LDEGSAL-------EPTLGDGAAAMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGG 195

Query: 258 TENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGL 317
                        T     R V  A    + K +  A+   G+S+    F    P G  +
Sbjct: 196 YPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLSEDIDYFVPHQPNGKKI 255

Query: 318 LDQVEKTLGLRKEKLWASR-YVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECG 376
           L+ V K LG   EK   +R  +LR  GNM A S+   L  +    +E  K   G   +  
Sbjct: 256 LEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASL----LESGKLKAG---DRV 308

Query: 377 VLFGFGPGLTVETVVL 392
           +LF +G G T E  VL
Sbjct: 309 LLFSYGSGFTAEAFVL 324

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. Length = 324

>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein]

 Score = 73.0 bits (180), Expect = 2e-14
 Identities = 82/386 (21%), Positives = 143/386 (37%), Gaps = 84/386 (21%)

Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           A IL IG+  P               VTN+D +  +    + I  R  I++R     +E 
Sbjct: 4   AKILGIGSYLPER------------VVTNADLEKRVDTSDEWIETRTGIRERRIAADDET 51

Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
             +                         L  EAA KA+++ G     I  +I +      
Sbjct: 52  TSD-------------------------LAVEAARKALEDAGISPDDIDLIIVATSTPDH 86

Query: 144 -MPGADVRLMRLLGLKPSVNRLMIY--TQGCYMGGTV--IRLAKDIAENNPGARVLVVCS 198
             P     +   LGL  +      +     C   G +  + +A  +  +     VLVV +
Sbjct: 87  LFPSTACLVQARLGLGGAP----AFDLQAAC--SGFLYALSVADGLIRSGGYKNVLVVGA 140

Query: 199 DI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD----ISNH---ESPLFQILS 249
           +   R+LD+ +   T         +FGDGAGA ++ A  D    +      +     +L 
Sbjct: 141 ETLSRILDWTDRD-TC-------VLFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLLY 192

Query: 250 CTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL-SNAMSPIGISDWNSLFY 308
                    +    G L  M     + +    A+   +++ L    ++P  I DW    +
Sbjct: 193 LPGGGSATPKEESGGGLLVMDGR-EVFKFAVRAMPKAIEEVLEKAGLTPEDI-DW----F 246

Query: 309 VVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE-VRKKSIEEMKA 367
           V H     +++ + K LG+ +EK       + +YGN  A S+   LDE +R+  I+    
Sbjct: 247 VPHQANLRIIEAIAKKLGIPEEK-VVV--TVDKYGNTSAASIPLALDEALREGRIKP--- 300

Query: 368 TTGEGLECGVLFGFGPGLTVETVVLQ 393
             G+ +   +L  FG GLT    +++
Sbjct: 301 --GDLV---LLEAFGGGLTWGAALVR 321

Length = 323

>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

 Score = 71.0 bits (175), Expect = 9e-14
 Identities = 78/302 (25%), Positives = 124/302 (41%), Gaps = 55/302 (18%)

Query: 112 LGKEAALKAIKEWGQPVSKITHLIF---SAFYGVDMPGADVRLMRLLGLKPSVNRLMIY- 167
           L  EAA KA+++ G     I  +I    +  Y    P     +   LG K +      + 
Sbjct: 53  LAVEAAKKALEDAGIDADDIDLIIVATSTPDYL--FPATACLVQARLGAKNAAA----FD 106

Query: 168 -TQGC--YMGGTVIRLAKDIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVF 222
               C  ++ G     A  +  +     VLVV ++   R+LD+ + S T +       +F
Sbjct: 107 INAACSGFLYGLST--AAGLIRSGGAKNVLVVGAETLSRILDWTDRS-TAV-------LF 156

Query: 223 GDGAGAAIIGADSD---------ISNHE-SPLFQILSCTQTTVPDTENYISGQLKEMGT- 271
           GDGAGA ++ A  +          S+   + L  I +    +  +        L   G  
Sbjct: 157 GDGAGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGRE 216

Query: 272 -YCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKE 330
            +    R +P +I   ++K     ++P  I DW    +V H     +++ V K LGL +E
Sbjct: 217 VFKFAVRLMPESIEEALEK---AGLTPDDI-DW----FVPHQANLRIIEAVAKRLGLPEE 268

Query: 331 KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETV 390
           K+      L  YGN  A S+   LDE    +IEE K   G+ +   +L GFG GLT    
Sbjct: 269 KVV---VNLDRYGNTSAASIPLALDE----AIEEGKLKKGDLV---LLLGFGAGLTWGAA 318

Query: 391 VL 392
           +L
Sbjct: 319 LL 320

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320

>gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

 Score = 62.7 bits (152), Expect = 7e-11
 Identities = 103/391 (26%), Positives = 151/391 (38%), Gaps = 90/391 (23%)

Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
             IL+ G+S P        + D    +  SDH          I  R  IKKR  HL    
Sbjct: 3   VHILSTGSSVPNFSVENQQFEDI---IETSDH---------WISTRTGIKKR--HL---- 44

Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
                      APS  +        + KL  EAA KA+ +      +I  +I +     D
Sbjct: 45  -----------APSSTS--------LTKLAAEAANKALDKAHMDPLEIDLIILATSTPDD 85

Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRL--AKDIAENNPGARVLVVCSDI- 200
           + G+  +L   +G   +V      T  C   G ++ L  A    +N     +LVV +D  
Sbjct: 86  LFGSASQLQAEIGATRAV--AFDITAAC--SGFILALVTATQFIQNGSYKNILVVGADTL 141

Query: 201 -RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDIS------NHESPLFQILSCTQ- 252
            + +D+ +     L        FGDGAGAAIIGA  + S        +  L   L     
Sbjct: 142 SKWIDWSDRKTCIL--------FGDGAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNK 193

Query: 253 ---------TTVPDTE-NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISD 302
                    T +P  +   IS   KE+  Y      VP  I     KCL+     I   D
Sbjct: 194 PVNNQSFGTTKLPQGQYQSISMNGKEV--YKFAVFQVPAVI----IKCLNALNISIDEVD 247

Query: 303 WNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSI 362
           W    +++H     +L+ +   L +   K+  +   L +YGN  A S+   LDE    +I
Sbjct: 248 W----FILHQANKRILEAIANRLSVPNSKMITN---LEKYGNTSAASIPLALDE----AI 296

Query: 363 EEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
           +  K   G+ +   VL GFG GLT   +VL+
Sbjct: 297 QNNKIQPGQII---VLSGFGAGLTWGAIVLK 324

Length = 326

>gnl|CDD|225959 COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 21/132 (15%)

Query: 112 LGKEAALKAIKEWGQPVSKITHLIF---SAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT 168
           +  EAA  A+K      SKI  +I    S    V  P A + +   LGL PS  R     
Sbjct: 54  MAVEAARNALKRADIDPSKIGAVIVGSESGPDAVK-PTATI-VAEALGLNPSA-RAADVE 110

Query: 169 QGCYMGGTVIRLAKDIAENNPGARVLVVCSDI---RVLDFHEPSETHLDVLVVQAVFGDG 225
             CY G   ++ A    E+   +  LV+ +D       D  E +             G G
Sbjct: 111 FACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGDALEYT------------AGAG 158

Query: 226 AGAAIIGADSDI 237
           A A +IG +  I
Sbjct: 159 AVAFLIGKNPPI 170

Length = 377

>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 52/299 (17%)

Query: 112 LGKEAALKAIKEWGQPVSKITHLIF---SAFYGVDMPGADVRLMRLLGLK--PSVNRLMI 166
           +G EAA +AI+  G     I  +I    +  +    P A   +   LG+K  P+      
Sbjct: 54  MGFEAAKRAIENAGISKDDIDLIIVATTTPDHA--FPSAACMVQAYLGIKGIPA----FD 107

Query: 167 YTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGD 224
            +  C      + +AK   E+     VLVV ++     LD+ +     L        FGD
Sbjct: 108 LSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVL--------FGD 159

Query: 225 GAGAAIIGADSD----ISNH---ESPLFQILSCTQT--TVPDTENYISGQLKEMGTYCHL 275
           GAGA ++G   D    IS H   +    + L              +I+ +  E   + H 
Sbjct: 160 GAGAVVLGESEDPGGIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNE--VFKHA 217

Query: 276 SRDVPVAIGNYVDKCL-SNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWA 334
            R     +G+ V++ L +N + P  I DW    +V H     +++ + K L L   ++  
Sbjct: 218 VRK----MGDVVEETLEANGLDPEDI-DW----FVPHQANLRIIEALAKRLELDMSQVVK 268

Query: 335 SRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
           +   + +YGN  A S+   LDE+    +   +   G+ L   +L  FG GLT    +++
Sbjct: 269 T---VHKYGNTSAASIPLALDEL----LRTGRIKPGDLL---LLVAFGGGLTWGAALVR 317

FabH in general initiate elongation in type II fatty acid synthase systems found in bacteria and plants. The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from E. coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 318

>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase

 Score = 49.7 bits (118), Expect = 2e-06
 Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 44/273 (16%)

Query: 157 LKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVL 216
           LK  V    +   GC  G   + LA ++ + NP    ++V ++   L  +  ++  +  L
Sbjct: 182 LKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSM--L 239

Query: 217 VVQAVFGDGAGAAIIGADS-DISNHESPLFQILSCTQTTVPDTENYISGQLKEMG---TY 272
           V   +F  G  A ++   S D    +  L  I+   + +    ++Y   + KE       
Sbjct: 240 VPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGS--SDKHYTCAEQKEDSKGIVG 297

Query: 273 CHLSRDVPVAIGNYVDKCLSNAMSPI--------------------------GISDWNSL 306
             LS+++ V  G+ +   L+ A+ P+                           + D+   
Sbjct: 298 VALSKELTVVAGDTLKTNLT-ALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLC 356

Query: 307 F--YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE 364
           F  + +H GG  LLD VEK LGL +  L  SR  L  +GN  + S+++ L  V      E
Sbjct: 357 FKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYV------E 410

Query: 365 MKATTGEGLECGVLFGFGPGLTVETVVLQSVST 397
            K     G     L  FG G    ++V +++ T
Sbjct: 411 AKCRVKRGDRVWQL-AFGSGFKCNSIVWRALRT 442

Length = 466

>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

 Score = 44.8 bits (107), Expect = 3e-06
 Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 302 DWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKS 361
           DW    +V H     ++D V K LGL  EK       L  YGN  A S+   LDE    +
Sbjct: 12  DW----FVPHQANLRIIDAVAKRLGLPPEK---VVVNLDRYGNTSAASIPLALDE----A 60

Query: 362 IEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
           +EE K   G+ +   +L GFG GLT    VL+
Sbjct: 61  VEEGKLKPGDLV---LLVGFGAGLTWGAAVLR 89

This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 90

>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

 Score = 47.2 bits (113), Expect = 6e-06
 Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 39/208 (18%)

Query: 192 RVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD-------ISNHES 242
           +VLV+ ++   +V D+ + +     +L     FGDGAGA ++ A  +       +   + 
Sbjct: 135 KVLVIGAERLSKVTDYTDRT---TCIL-----FGDGAGAVVLEATENEPGFIDYVLGTDG 186

Query: 243 PLFQILSCTQ--TTVPDTENYISGQLKEMG--TYCHLSRDVPVAIGNYVDKCLSNAMSPI 298
               IL  T   TT+        G + + G   +    R +P      ++K     ++  
Sbjct: 187 DGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKA---GLTKD 243

Query: 299 GISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVR 358
            I DW     + H     +++ + + LG+  EK   S   +  YGN  A ++   LD   
Sbjct: 244 DI-DW----VIPHQANLRIIESLCEKLGIPMEKTLVS---VEYYGNTSAATIPLALDLA- 294

Query: 359 KKSIEEMKATTGEGLECGVLFGFGPGLT 386
              +E+ K   G+ L   +L+GFG GLT
Sbjct: 295 ---LEQGKIKPGDTL---LLYGFGAGLT 316

Length = 325

>gnl|CDD|213655 TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP-GADVRLMRLLGLKPSVNRLMIYTQG 170
           +   AA   +    +   KI  +IF    G+D    A V +  LLGL+P   R     Q 
Sbjct: 52  MAASAAKPILDRNDK--QKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFC-RSFELKQA 108

Query: 171 CYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAI 230
           CY     +++AK     +P  +VLV+ SDI       P E            G GA A +
Sbjct: 109 CYGATAALQMAKGHVALSPDRKVLVIASDIAKYGLESPGE---------PTQGAGAVAML 159

Query: 231 IGAD 234
           + AD
Sbjct: 160 VSAD 163

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. Length = 379

>gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III

 Score = 44.0 bits (104), Expect = 9e-05
 Identities = 48/192 (25%), Positives = 69/192 (35%), Gaps = 48/192 (25%)

Query: 222 FGDGAGAAIIGADSDISNHESPLFQI-----------LSCTQTTVPDTE-----NYISGQ 265
           FGDGAGA ++ A  D    E  L              L  T     D       N +   
Sbjct: 201 FGDGAGAVVLQACDD---DEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDF 257

Query: 266 LKEMGTYCHLS-----------RDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGG 314
             +  +Y  +            R VP  I    +  L  A       DW     ++H   
Sbjct: 258 PPKKASYSCIQMNGKEVFKFAVRCVPQVI----ESALQKAGLTAESIDW----LLLHQAN 309

Query: 315 DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLE 374
             ++D V + LG+  EK+ ++   L  YGN  A S+   LDE    ++   K   G+ + 
Sbjct: 310 QRIIDAVAQRLGIPPEKVISN---LANYGNTSAASIPLALDE----AVRSGKVKKGDVIA 362

Query: 375 CGVLFGFGPGLT 386
                GFG GLT
Sbjct: 363 TA---GFGAGLT 371

Length = 379

>gnl|CDD|203976 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 10/71 (14%)

Query: 168 TQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDG 225
              C      +  A  +  +     VLVV ++   R+LD+ + S T +       +FGDG
Sbjct: 4   NAACSGFVYALSTAAALIRSGRAKNVLVVGAETLSRILDWTDRS-TAV-------LFGDG 55

Query: 226 AGAAIIGADSD 236
           AGA ++ A  +
Sbjct: 56  AGAVVLEATEE 66

This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 80

>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 287 VDKCLSNAMSPIGISDWNSLF--YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGN 344
           V K  +  M P  I D+   F  + +H GG  ++D++EK L L    + ASR  L  +GN
Sbjct: 376 VKKLFNKKMKPY-IPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGN 434

Query: 345 MGAPSVFFILDEVRKK 360
             + S+++ L  +  K
Sbjct: 435 TSSSSIWYELAYIEAK 450

Length = 502

>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

 Score = 38.9 bits (92), Expect = 0.003
 Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 50/218 (22%)

Query: 192 RVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD---ISNHESPLF- 245
            VLV+ ++   R++D+ + S     VL     FGDGAGA ++GA  +   +S H   L  
Sbjct: 134 NVLVIGAEKLSRIVDWTDRSTC---VL-----FGDGAGAVVLGASEEPGILSTH---LGS 182

Query: 246 -----QILSCTQ--TTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI 298
                 +L      +  P +  Y+  + +E   +    R++       ++      ++P 
Sbjct: 183 DGSYGDLLYLPGGGSRGPASPGYLRMEGRE--VFKFAVRELAKVAREALEA---AGLTPE 237

Query: 299 GISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLR---EYGNMGAPSVFFILD 355
            I DW     V H     ++D   K LGL  EK      V+    +YGN  A S+   LD
Sbjct: 238 DI-DW----LVPHQANLRIIDATAKKLGLPMEK------VVVTVDKYGNTSAASIPLALD 286

Query: 356 EVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
           E    ++ + +   G+ +   +L GFG GLT    +++
Sbjct: 287 E----AVRDGRIKRGDLV---LLEGFGGGLTWGAALVR 317

Length = 319

>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 17/47 (36%), Positives = 28/47 (59%)

Query: 308 YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFIL 354
           + +H GG  L+D++EK L L    + ASR  L  +GN  + S+++ L
Sbjct: 374 FCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYEL 420

Length = 478

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	402
PLN03172	393	chalcone synthase family protein; Provisional	100.0
PLN03170	401	chalcone synthase; Provisional	100.0
PLN03168	389	chalcone synthase; Provisional	100.0
PLN03173	391	chalcone synthase; Provisional	100.0
PLN03169	391	chalcone synthase family protein; Provisional	100.0
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	100.0
PLN03171	399	chalcone synthase-like protein; Provisional	100.0
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	100.0
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	100.0
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	100.0
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	100.0
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PLN02932	478	3-ketoacyl-CoA synthase	100.0
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	100.0
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	100.0
PRK06840	339	hypothetical protein; Validated	100.0
PLN02377	502	3-ketoacyl-CoA synthase	100.0
PRK04262	347	hypothetical protein; Provisional	100.0
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PLN02854	521	3-ketoacyl-CoA synthase	100.0
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	100.0
PLN02192	511	3-ketoacyl-CoA synthase	100.0
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	100.0
PLN00415	466	3-ketoacyl-CoA synthase	100.0
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	100.0
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	100.0
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	100.0
PLN02577	459	hydroxymethylglutaryl-CoA synthase	100.0
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	100.0
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	100.0
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.97
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	99.95
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	99.95
PF02797	151	Chal_sti_synt_C: Chalcone and stilbene synthases,	99.94
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.87
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	99.86
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	99.83
PRK08304	337	stage V sporulation protein AD; Validated	99.8
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	99.8
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	99.73
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.71
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	99.7
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	99.7
PRK09051	394	beta-ketothiolase; Provisional	99.68
PRK12404	334	stage V sporulation protein AD; Provisional	99.67
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.66
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	99.66
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.65
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.64
PRK05790	393	putative acyltransferase; Provisional	99.64
KOG1393	462	consensus Hydroxymethylglutaryl-CoA synthase [Lipi	99.63
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.62
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	99.62
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	99.62
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.61
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	99.61
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.6
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	99.59
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	99.58
PRK06059	399	lipid-transfer protein; Provisional	99.57
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	99.57
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	99.57
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.55
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.55
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.55
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.54
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	99.53
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	99.53
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	99.52
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	99.51
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	99.51
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.5
PLN02287	452	3-ketoacyl-CoA thiolase	99.48
PLN02644	394	acetyl-CoA C-acetyltransferase	99.48
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.48
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	99.48
PRK06158	384	thiolase; Provisional	99.47
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	99.47
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	99.46
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	99.46
PRK08256	391	lipid-transfer protein; Provisional	99.46
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.45
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	99.45
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.44
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	99.44
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.44
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	99.44
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	99.44
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	99.44
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.43
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	99.43
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.42
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	99.42
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.42
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.41
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.41
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	99.4
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	99.4
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	99.39
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	99.38
cd00832	399	CLF Chain-length factor (CLF) is a factor required	99.38
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	99.38
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	99.36
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	99.35
PRK06157	398	acetyl-CoA acetyltransferase; Validated	99.32
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	99.31
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	99.31
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	99.27
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	99.25
PRK08257	498	acetyl-CoA acetyltransferase; Validated	99.24
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	99.24
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	99.24
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	99.22
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.16
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.15
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	99.13
PRK07855	386	lipid-transfer protein; Provisional	99.04
KOG1390	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	98.96
KOG1394	440	consensus 3-oxoacyl-(acyl-carrier-protein) synthas	98.93
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	98.87
PRK07937	352	lipid-transfer protein; Provisional	98.84
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	98.83
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	98.74
COG3321	1061	Polyketide synthase modules and related proteins [	98.69
KOG1389	435	consensus 3-oxoacyl CoA thiolase [Lipid transport	98.43
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	98.13
KOG1406	408	consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44	97.91
KOG1391	396	consensus Acetyl-CoA acetyltransferase [Lipid tran	97.54
KOG1392	465	consensus Acetyl-CoA acetyltransferase [Lipid tran	97.05
PF08540	282	HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s	96.99
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	96.35
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	95.97
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	95.87
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	95.09
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	94.86
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	93.63
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	93.21
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	93.09
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	92.62
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	92.59
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	92.13
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	92.11
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	91.99
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	91.01
PRK06840	339	hypothetical protein; Validated	90.42
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	90.38
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	90.11
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	89.95
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	89.61
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	89.48
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	89.31
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	88.88
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	88.76
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	88.24
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	87.82
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	87.78
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	86.45
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	86.08
PRK04262	347	hypothetical protein; Provisional	85.87
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	82.6
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	82.43
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	80.7
PRK08257	498	acetyl-CoA acetyltransferase; Validated	80.51
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	80.14

>PLN03172 chalcone synthase family protein; Provisional

Probab=100.00  E-value=2.9e-64  Score=497.20  Aligned_cols=378  Identities=66%  Similarity=1.075  Sum_probs=330.8

Q ss_pred             cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410           15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE   94 (402)
Q Consensus        15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~   94 (402)
                      +.++.++| ++|.|+|+++|++.++|+++.+.+.+..+.++.++++++..+|++++||++||++.+++.+..++++..++
T Consensus         9 ~~~~~~~~-~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~   87 (393)
T PLN03172          9 KAQRAEGP-ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYM   87 (393)
T ss_pred             ccCCCCCC-eEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccC
Confidence            44566788 99999999999999999999998876665444455666678899999999999999776666666666678


Q ss_pred             CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410           95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG  174 (402)
Q Consensus        95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~  174 (402)
                      .|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++.+++++++||+|+
T Consensus        88 ~p~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~  167 (393)
T PLN03172         88 APSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAG  167 (393)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHH
Confidence            89999999999999999999999999999999999999999999999669999999999999998764468899999999


Q ss_pred             HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee
Q 044410          175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT  254 (402)
Q Consensus       175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~  254 (402)
                      +.||++|.+++++++.++||||++|.+|..|.++.|.+.++.++..+|||||+|+||++++. .+...+.+++.+..+.+
T Consensus       168 ~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~-~~~~~~~~~i~~~~~~~  246 (393)
T PLN03172        168 GTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFEIVSAAQTI  246 (393)
T ss_pred             HHHHHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCC-CcccCceeEEeeeccEE
Confidence            99999999999999999999999999997676665544555677899999999999998655 32223457888888888


Q ss_pred             cCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH
Q 044410          255 VPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW  333 (402)
Q Consensus       255 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~  333 (402)
                      +|.+++.+.|.+...|+.+.+.+++|+++.++++++++++|+++|++. .|| +|++||+|++|++.++++||++++++.
T Consensus       247 ~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~-~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~  325 (393)
T PLN03172        247 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGIND-WNSIFWIAHPGGPAILDQVEIKLDLKEEKLR  325 (393)
T ss_pred             ecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHH
Confidence            899999999999888888888899999999999999999999999996 888 999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          334 ASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       334 ~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      .+|+++++||||+|||+|++|++++++..++|++++|++.+++++++||+|+||+++||||.
T Consensus       326 ~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~  387 (393)
T PLN03172        326 ATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSV  387 (393)
T ss_pred             HHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEec
Confidence            99999999999999999999999885322337777774447899999999999999999994

>PLN03170 chalcone synthase; Provisional

Probab=100.00  E-value=2.4e-64  Score=499.52  Aligned_cols=377  Identities=63%  Similarity=1.059  Sum_probs=328.7

Q ss_pred             cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410           15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE   94 (402)
Q Consensus        15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~   94 (402)
                      +.++..+| ++|.++|+.+|++.++|+++.+.+.+..+.++.++++++..+|++++||++||++.+++.+..++++..++
T Consensus        13 ~~~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~   91 (401)
T PLN03170         13 KAQRATGP-ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYM   91 (401)
T ss_pred             cCCCCCCC-eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccC
Confidence            34455688 89999999999999999999999877664444455666678899999999999998766555566666678


Q ss_pred             CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410           95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG  174 (402)
Q Consensus        95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~  174 (402)
                      .|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.+++++++||+|+
T Consensus        92 ~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~  171 (401)
T PLN03170         92 APSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAG  171 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHH
Confidence            89999999999999999999999999999999999999999999999779999999999999998865689999999999


Q ss_pred             HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee
Q 044410          175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT  254 (402)
Q Consensus       175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~  254 (402)
                      +.||++|.+++++++.++||||++|.+|..|++|.+.+.+++.+..+|||||+|+||++++. .++..+.+++.+..+.+
T Consensus       172 ~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~-~~~~~~~~~l~~~~~~~  250 (401)
T PLN03170        172 GTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPD-ERVERPLFQLVSASQTI  250 (401)
T ss_pred             HHHHHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCc-ccccCCceEEeeccceE
Confidence            99999999999999999999999999998675555433456677889999999999998765 32222356788777777


Q ss_pred             cCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH
Q 044410          255 VPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW  333 (402)
Q Consensus       255 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~  333 (402)
                      +|++++.+.|.+++.|+.+.+++++|..+.+.++++++++|+++|++. +|+ +|++||+|++|++.+++.||++++|+.
T Consensus       251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~-~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~  329 (401)
T PLN03170        251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITD-YNSIFWVAHPGGPAILDQVEAKVGLEKERMR  329 (401)
T ss_pred             ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEecCCcHHHHHHHHHHcCCChHHHH
Confidence            898888788888888888888999999999999999999999999997 888 999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          334 ASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       334 ~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .+|+++++||||+|+|+|++|++++++..++|++++|++.|++++++||+|++|+++||+|
T Consensus       330 ~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~  390 (401)
T PLN03170        330 ATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHS  390 (401)
T ss_pred             HHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHhee
Confidence            8899999999999999999999998532223778887434789999999999999999999

>PLN03168 chalcone synthase; Provisional

Probab=100.00  E-value=1.8e-63  Score=491.80  Aligned_cols=377  Identities=49%  Similarity=0.863  Sum_probs=322.4

Q ss_pred             ccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCC
Q 044410           16 VKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEA   95 (402)
Q Consensus        16 ~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~   95 (402)
                      .++.++| ++|.++|+.+|++.++|+++.+.+.+...+++.+.++++..+|++++||++||++.+++.+..++++..+..
T Consensus         9 ~~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~   87 (389)
T PLN03168          9 QPRAEGP-ACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYME   87 (389)
T ss_pred             CCCCCCC-eEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccC
Confidence            3466688 999999999999999999999998776644444556666788999999999999987766666776666688


Q ss_pred             CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHH
Q 044410           96 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGG  175 (402)
Q Consensus        96 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~  175 (402)
                      |++++|++.|.+.+.+|+.+|+++||+++|++++|||+||++|+|++..|+++.+|+++||+++.+.+++++++||+|++
T Consensus        88 ps~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~  167 (389)
T PLN03168         88 PSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGA  167 (389)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHH
Confidence            99999999999999999999999999999999999999999999997789999999999999987666899999999999


Q ss_pred             HHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeec
Q 044410          176 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTV  255 (402)
Q Consensus       176 ~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~  255 (402)
                      +||++|++++++++.++||||++|.+|..+.++++.+.+++.+..+|||||+|+||++++. .......+++....+.++
T Consensus       168 ~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~-~~~~~~~~~~~~~~~~~~  246 (389)
T PLN03168        168 SVLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPK-PEVEKALFEVHWAGETIL  246 (389)
T ss_pred             HHHHHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCC-CccCCcceEEEeeeeEEE
Confidence            9999999999999999999999999998675443333455678899999999999998654 221223567776666788


Q ss_pred             CCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHH
Q 044410          256 PDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWA  334 (402)
Q Consensus       256 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~  334 (402)
                      |++++.+.|.+...|+.+.+.+++++.+.++++.+++++|+..|+.. .++ +|++||+|++|++.++++||+++||+..
T Consensus       247 p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~-~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~  325 (389)
T PLN03168        247 PESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD-WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQG  325 (389)
T ss_pred             cCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHHH
Confidence            98888888988888887877889999999999999999999999875 555 9999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          335 SRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       335 ~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      +|+++++||||+|||+|+.|++++++.+++|....|.++|++++++||+|++|++++|||.
T Consensus       326 s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~  386 (389)
T PLN03168        326 SRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAA  386 (389)
T ss_pred             HHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEEEcchhhhhhhhheec
Confidence            9999999999999999999999876422212100011238999999999999999999993

>PLN03173 chalcone synthase; Provisional

Probab=100.00  E-value=2e-63  Score=490.97  Aligned_cols=378  Identities=65%  Similarity=1.046  Sum_probs=327.8

Q ss_pred             cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410           15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE   94 (402)
Q Consensus        15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~   94 (402)
                      +.++.++| ++|.++|+.+|++.++|+++.+.+.+...+++...++++..+|++++||++||++.+++.+..+|.+..++
T Consensus         9 ~~~~~~~~-~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~   87 (391)
T PLN03173          9 KAQRAEGP-ATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYM   87 (391)
T ss_pred             cCCCCCCC-eEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCccccccc
Confidence            34466688 99999999999999999999999876664333344555678899999999999999776555566666677


Q ss_pred             CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410           95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG  174 (402)
Q Consensus        95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~  174 (402)
                      .|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++.+++++++||+|+
T Consensus        88 ~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~  167 (391)
T PLN03173         88 APSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAG  167 (391)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHH
Confidence            89999999999999999999999999999999999999999999999668999999999999998765578899999999


Q ss_pred             HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee
Q 044410          175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT  254 (402)
Q Consensus       175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~  254 (402)
                      +.||++|++++++++.++||||++|.+|..|+++.|.+.++..+..+|||||+|+||+.++. .++..+.+++.+..+..
T Consensus       168 ~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~-~~~~~~~~~l~~~~~~~  246 (391)
T PLN03173        168 GTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPV-LGVEKPLFELVSAAQTI  246 (391)
T ss_pred             HHHHHHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCC-CCcCCcceEEEeeeeEE
Confidence            99999999999999999999999999996676665544455567899999999999998654 33223457888888888


Q ss_pred             cCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH
Q 044410          255 VPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW  333 (402)
Q Consensus       255 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~  333 (402)
                      +|.+++.+.|.++..|+.+.+.+++|+.+.+.++++++++|+++|++. +|| +|++||+|++|++.++++||++++|+.
T Consensus       247 ~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~-~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~  325 (391)
T PLN03173        247 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISD-WNSLFWIAHPGGPAILDQVEAKLALKPEKLR  325 (391)
T ss_pred             ecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEECCCcHHHHHHHHHHcCCChHHHH
Confidence            999998889998888888888899999999999999999999999997 888 999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          334 ASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       334 ~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      .+|+++++||||+|||+|++|++++++..+++.+++|++++++++++||+|+|+++++|+|.
T Consensus       326 ~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~  387 (391)
T PLN03173        326 ATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSV  387 (391)
T ss_pred             HHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhhc
Confidence            99999999999999999999999996422124444553348899999999999999999994

>PLN03169 chalcone synthase family protein; Provisional

Probab=100.00  E-value=1.6e-61  Score=479.00  Aligned_cols=368  Identities=40%  Similarity=0.703  Sum_probs=311.0

Q ss_pred             cCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCC
Q 044410           17 KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAP   96 (402)
Q Consensus        17 ~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~   96 (402)
                      ..+.++ ++|.|+|+++|++.++|+++.+.+....... .+.++++.++|++++||++||++.+++....+|.+.....|
T Consensus        16 ~~~~~~-~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~   93 (391)
T PLN03169         16 AANPGK-ATILALGKAFPSQLVPQEYLVDGYFRDTKCD-DPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTP   93 (391)
T ss_pred             cCCCCC-eEEEEEEeeCCCeecCHHHHHHHHHHHhccc-CHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCC
Confidence            344566 8999999999999999999998655422111 23455567889999999999999754444445655555679


Q ss_pred             ChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHH
Q 044410           97 SLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGT  176 (402)
Q Consensus        97 ~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~  176 (402)
                      ++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++.+..|+++.+|+++||+++.+.+++++++||+|+++
T Consensus        94 ~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~  173 (391)
T PLN03169         94 TIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVA  173 (391)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHH
Confidence            99999999999999999999999999999999999999999986688999999999999998876447999999999999


Q ss_pred             HHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecC
Q 044410          177 VIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVP  256 (402)
Q Consensus       177 al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p  256 (402)
                      ||++|.+++++++.++||||++|.+|..+..+.+....++.+..+|||||+|+||+.++. .......+.+...++..+|
T Consensus       174 aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~-~~~~~~~~~l~~~~~~~ip  252 (391)
T PLN03169        174 GLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPI-PVSESPFFELHTAIQQFLP  252 (391)
T ss_pred             HHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCC-cccCCcceEEEeeeeeEcC
Confidence            999999999999999999999999987554332222345678899999999999998664 2101234667666667788


Q ss_pred             CCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCC--CcceEEEEcCCCHHHHHHHHHHcCCCccccHH
Q 044410          257 DTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISD--WNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWA  334 (402)
Q Consensus       257 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~--~~di~~i~H~~~~~~~~~~~~~lgi~~ek~~~  334 (402)
                      .+.+.+.|.+...|+.+.+++++|+++.+.++++++++|+++|+++  .++++|++||+|++|++.++++||++++|+..
T Consensus       253 ~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~  332 (391)
T PLN03169        253 GTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLEC  332 (391)
T ss_pred             CCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHH
Confidence            8777677777778888888999999999999999999999999984  13448899999999999999999999999998


Q ss_pred             HHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc---CCCCCceEEEEEEcccccceeeEEee
Q 044410          335 SRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT---TGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       335 ~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~---~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +|+++++||||+|||+|++|++++++    ++++   +|   |++++++||+|++|++++|||
T Consensus       333 s~~~l~~~GNtsSasip~~L~~~~~~----~~~~~~~~g---d~~ll~afG~G~s~~~~ll~~  388 (391)
T PLN03169        333 SRRALMDYGNVSSNTIVYVLEYMREE----LKKKGEEDE---EWGLILAFGPGITFEGILARN  388 (391)
T ss_pred             HHHHHHHhCCchHhHHHHHHHHHHHh----hcccCCCCC---cEEEEEEEcccHhHHHHHHhh
Confidence            88899999999999999999999887    6665   56   999999999999999999998

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=100.00  E-value=2.8e-62  Score=464.29  Aligned_cols=313  Identities=23%  Similarity=0.286  Sum_probs=268.9

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|.|+|+++++|+++++.+   ..++         +||..++||++||++.++|.                    
T Consensus         4 a~i~g~G~~lP~~~vtn~d~e~~~---~tsd---------ewI~~rtGir~R~~a~~~e~--------------------   51 (323)
T COG0332           4 AKILGIGSYLPERVVTNADLEKRV---DTSD---------EWIETRTGIRERRIAADDET--------------------   51 (323)
T ss_pred             ceEEEEEeecCCcccChHHHHhcc---CCCc---------ceeeeecCCceeeecCCCcc--------------------
Confidence            689999999999999999998653   4443         89999999999999988763                    


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                           .++|+++|+++||+++|++|+|||+||++|++| +.+|++|+.||++||+....  +||++.+|+|+++||.+|.
T Consensus        52 -----~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--afDl~aaCsgf~yaL~~A~  124 (323)
T COG0332          52 -----TSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--AFDLQAACSGFLYALSVAD  124 (323)
T ss_pred             -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--eeechhhhHHHHHHHHHHH
Confidence                 899999999999999999999999999999999 78899999999999999865  8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee----ecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT----TVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~----~~p~~  258 (402)
                      .+|++|.+++||||++|++|+ +.+++     ++.+.++|||||+|+||++.+...++.  .+.+.+++..    ..|.+
T Consensus       125 ~~i~sG~~k~vLVVg~e~~S~-~ld~~-----dR~t~vlFgDGAgAvvl~~~~~~~~i~--~~~l~sdg~~~~~l~~~~~  196 (323)
T COG0332         125 GLIRSGGYKNVLVVGAETLSR-ILDWT-----DRDTCVLFGDGAGAVVLEATEDDNGIL--DTDLGSDGSQGDLLYLPGG  196 (323)
T ss_pred             HHHHcCCCCEEEEEehhHhhc-cCCHh-----hccceEEEcCCceEEEEecCCCCcCee--eeeeeccccCCCeeeccCC
Confidence            999999999999999999997 44543     456899999999999999987313321  2344443332    12222


Q ss_pred             cccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHH
Q 044410          259 ENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASR  336 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~  336 (402)
                      ..... ........+.| |+++|+++++.++++++++|+++++++ +|| +|+|||+|.+|++.++++||+|++|+..+ 
T Consensus       197 ~~~~~-~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~-~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~-  273 (323)
T COG0332         197 GSATP-KEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP-EDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVT-  273 (323)
T ss_pred             CCccc-cccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEccccccHHHHHHHHHHcCCCHHHHhhH-
Confidence            11110 00011123344 999999999999999999999999998 999 99999999999999999999999999986 


Q ss_pred             HHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          337 YVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       337 ~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                        +++||||++||+|++|++++++    |++++|   |+++|++||+|++||++++||.
T Consensus       274 --~~~yGNtsaAsiplaL~~~~~~----g~ik~G---d~ill~~fG~Gltwg~~~~r~~  323 (323)
T COG0332         274 --VDKYGNTSAASIPLALDEALRE----GRIKPG---DLVLLEAFGGGLTWGAALVRWG  323 (323)
T ss_pred             --HHHhcccccchHHHHHHHHhhh----CCCCCC---CEEEEEeecCcceeeeEEEEeC
Confidence              9999999999999999999998    999999   9999999999999999999984

>PLN03171 chalcone synthase-like protein; Provisional

Probab=100.00  E-value=5.6e-60  Score=468.83  Aligned_cols=375  Identities=48%  Similarity=0.839  Sum_probs=308.9

Q ss_pred             cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410           15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE   94 (402)
Q Consensus        15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~   94 (402)
                      ..++.++| ++|.|+|+|+|+++++|+++.+.+.+....+..++++++.+||++++||++||++.+++.+..+|.+....
T Consensus        15 ~~~~~~~~-~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~   93 (399)
T PLN03171         15 RAQRADGL-AAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHD   93 (399)
T ss_pred             cccCCCCC-cEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccC
Confidence            34455677 99999999999999999999988644322333344555678999999999999998765555566666667


Q ss_pred             CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410           95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG  174 (402)
Q Consensus        95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~  174 (402)
                      .|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.+++++.+||+|+
T Consensus        94 ~~~~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~  173 (399)
T PLN03171         94 APSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAG  173 (399)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHH
Confidence            89999999999999999999999999999999999999999999999558999999999999987653356778899999


Q ss_pred             HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccc-hhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee
Q 044410          175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETH-LDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT  253 (402)
Q Consensus       175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~-~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~  253 (402)
                      ++||++|.+++++++.++||||++|.+|..+ ++.+++ .++.+...+|||||+|+||++.++ .. ....+++......
T Consensus       174 ~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~-~~-~~~~~~l~~~~~~  250 (399)
T PLN03171        174 AAALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADAD-AA-ERPLFEIVSAAQA  250 (399)
T ss_pred             HHHHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCC-CC-CCCceEEEEeeeE
Confidence            9999999999999999999999999999755 343322 233445689999999999998664 21 1124677766666


Q ss_pred             ecCCCcccccceeecCceEEEeC-CchhHHHHHhHHHHHHHhhcc-----CCCCCCcceEEEEcCCCHHHHHHHHHHcCC
Q 044410          254 TVPDTENYISGQLKEMGTYCHLS-RDVPVAIGNYVDKCLSNAMSP-----IGISDWNSLFYVVHPGGDGLLDQVEKTLGL  327 (402)
Q Consensus       254 ~~p~~~~~~~~~~~~~g~~~~~~-~~v~~~~~~~~~~~i~~~L~~-----~gl~~~~di~~i~H~~~~~~~~~~~~~lgi  327 (402)
                      .+|.+.+.+.|.....++.+.++ +.+++.+.+.+.++++++|.+     .|++. +|+.|++||+|++|++.++++||+
T Consensus       251 ~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~-~di~~~~Hq~~~~il~~v~~~Lgl  329 (399)
T PLN03171        251 IIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEW-NDLFWAVHPGSSAILDQVDAALGL  329 (399)
T ss_pred             EecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCc-ccceEEEcCCcHHHHHHHHHHcCC
Confidence            78888777777766666666665 788887777777777766553     57776 888566799999999999999999


Q ss_pred             CccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc--ccCCCCCceEEEEEEcccccceeeEEeeeccC
Q 044410          328 RKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK--ATTGEGLECGVLFGFGPGLTVETVVLQSVSTN  398 (402)
Q Consensus       328 ~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~--i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~  398 (402)
                      +++|+..+|.++++||||+|||+|++|++++++    ++  +++|.+.|++++++||+|++|++++|+|.+.|
T Consensus       330 ~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~----~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~~~  398 (399)
T PLN03171        330 EPEKLAASRRVLSDYGNMFGATVIFALDELRRQ----MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASGHP  398 (399)
T ss_pred             CHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhh----HhhcCCCCCCcceEEEEEEcccHHHHHHHhhcccCC
Confidence            999999888899999999999999999999876    53  45553238999999999999999999999988

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=100.00  E-value=8.5e-56  Score=436.23  Aligned_cols=354  Identities=41%  Similarity=0.668  Sum_probs=296.5

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccc--hhHhhhCCCCccCCCCChHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLT--EEILKENPNMCCYEAPSLDAR  101 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~--~~~~~~~~~~~~~~~~~~~~~  101 (402)
                      ++|.|+|+++|+++++|+++.+.+.........+..+++.+||.+++||++||++.+  ++...  +  .....|.+++|
T Consensus         2 ~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~--~--~~~~~~~~~~~   77 (361)
T cd00831           2 ATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYA--P--RPEMSPSLDER   77 (361)
T ss_pred             cEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcC--C--ccccCCCcCcc
Confidence            689999999999999999999886432211001234455689999999999999987  33210  0  00134778999


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccchHHHHHHH
Q 044410          102 QAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYMGGTVIRL  180 (402)
Q Consensus       102 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~~~~al~~  180 (402)
                      +..+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+++||+++... +++++ ++|+|++.||++
T Consensus        78 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~-~~dv~~~~C~~~~~al~~  156 (361)
T cd00831          78 NDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVK-RYNLGGMGCSAGAIALDL  156 (361)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccc-hhccccccchhHHHHHHH
Confidence            9999999999999999999999999999999999999988889999999999999986443 78998 899999999999


Q ss_pred             HHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcc
Q 044410          181 AKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTEN  260 (402)
Q Consensus       181 A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  260 (402)
                      |.+++++++.++||||++|.+|..+ ++.+ +++.....++|||||+|+||++++.........+++.+.....+|.+.+
T Consensus       157 A~~~~~~~~~~~aLvv~~e~~s~~~-~~~d-~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  234 (361)
T cd00831         157 AKDLLEANPGARVLVVSTELCSLWY-RGPD-HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED  234 (361)
T ss_pred             HHHHHHHCCCCEEEEEEeeccccee-CCCC-cHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCC
Confidence            9999999999999999999999744 4433 1344446789999999999998765211112345666555566787766


Q ss_pred             cccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccC--CCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410          261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI--GISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY  337 (402)
Q Consensus       261 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~--gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~  337 (402)
                      .+.|.+...++.+.++++++..+...++++++++|+++  |++. +|| +|++||+|+++++.+++.||++++|+..+|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~-~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~  313 (361)
T cd00831         235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFK-LAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASRM  313 (361)
T ss_pred             ceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcc-ccceEEEECCCChHHHHHHHHHcCCCHHHHHHHHH
Confidence            66676666677778888999999999999999999999  9997 999 9999999999999999999999999987777


Q ss_pred             HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410          338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll  392 (402)
                      ++++||||+|||+|++|++++++    |++++|   |+|++++||+|++|+++||
T Consensus       314 ~l~~~GN~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~l~  361 (361)
T cd00831         314 VLRRYGNMSSSSVLYVLAYMEAK----GRVKRG---DRGLLIAFGPGFTCESAVW  361 (361)
T ss_pred             HHHHhCCchhccHHHHHHHHHHh----CCCCCC---CEEEEEEEcCCceeeeeeC
Confidence            89999999999999999999998    889999   9999999999999999885

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=3.4e-54  Score=392.12  Aligned_cols=352  Identities=29%  Similarity=0.503  Sum_probs=311.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHH-HcCcceeecccchhHhhhCCCCccCCCCChHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICE-RQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQ  102 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~-~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (402)
                      ..|.|+++++|++.+.|.|+.+.+......+   + .+...+.+. +.+|++|+++.|.+..+        .-+++.+||
T Consensus         2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~---~-~~~I~r~l~~~~~i~~R~~v~Pl~~y~--------e~~~f~ekN   69 (356)
T COG3424           2 AVIASVATALPPYRYNQSEITDSFAELPFQE---G-REDIPRVLHANAQINRRHLVLPLDWYR--------EPHGFGEKN   69 (356)
T ss_pred             ceeeecccCCCccccchHHHHHHHHHhcccc---c-hHHHHHHHhhccccccceecccHhhcc--------CCCChhhhh
Confidence            4799999999999999999888875433222   2 233445554 78999999999987522        235789999


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          103 AMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       103 ~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                      +.|.+.+..|.++|.++||+.+++.++|||+|+++|+|+...|++..+|..+||+++.+.|......||+++..+|..|.
T Consensus        70 ~ifie~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~  149 (356)
T COG3424          70 EIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARAR  149 (356)
T ss_pred             hhHHHHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999998888889999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI  262 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  262 (402)
                      .++++.|..+||||+.|.||.++. ..++..++.+...+||||++|+|++.+....+.......+.+..+.++|++++.|
T Consensus       150 ~y~ra~P~~~vlvV~vELCSLt~~-~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~M  228 (356)
T COG3424         150 DYCRAAPDANVLVVCVELCSLTYV-FADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIM  228 (356)
T ss_pred             HHHhhCccceEEEEEeeeeeeeee-cCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCcccccc
Confidence            999999999999999999998765 3333345788899999999999999865422223335667777788899999999


Q ss_pred             cceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHh
Q 044410          263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLRE  341 (402)
Q Consensus       263 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~  341 (402)
                      .|.+.+.|+.+.++++++..+...+...+..+|..++++. +|| .|+.|+++++++++..+.||+++|+...+|+.+++
T Consensus       229 gwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~-~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~  307 (356)
T COG3424         229 GWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSI-EDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLRE  307 (356)
T ss_pred             ceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCch-hhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999997 999 99999999999999999999999999999999999


Q ss_pred             cCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410          342 YGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       342 ~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                      |||++||++++.|.+.+++    + .++|   +++++.++|+||+...+|++|.+.
T Consensus       308 ~GNMSSatvLfVL~d~l~~----~-~~~g---~~Gl~~A~GPGf~sElvL~~w~~~  355 (356)
T COG3424         308 YGNMSSATVLFVLEDTLQK----A-PKSG---SRGLMFAMGPGFCSELVLLDWEGG  355 (356)
T ss_pred             hCCccchhhHHHHHHHHHh----c-CCCC---cceeeeecCCcceeeeeeEEeecc
Confidence            9999999999999999996    4 6778   899999999999999999999864

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=7.5e-53  Score=412.32  Aligned_cols=317  Identities=21%  Similarity=0.259  Sum_probs=258.1

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+++.+...   ..+     ....+++.+++||++||++.+++                     
T Consensus         8 ~~I~~~g~~lP~~~v~~~~~~~~~~---~~~-----~~~~~~i~~~~Gi~~R~~~~~~e---------------------   58 (353)
T PRK12880          8 AKISGICVSVPEHKICIDDELESVF---SND-----IKTLKRMKKVIGLNTRYICDENT---------------------   58 (353)
T ss_pred             cEEEEEEEECCCeEecHHHHHHHhc---Ccc-----hhhhhhhhhccCceEEEeCCCCC---------------------
Confidence            7999999999999999997654431   111     01245788899999999997665                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ++.+|+++|+++||+++|++++|||+||++|++| +..|+++.+|+++||+++.+. +++++++|+|+++||++|.
T Consensus        59 ----~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~-~~di~~~C~g~~~aL~~A~  133 (353)
T PRK12880         59 ----CVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTI-AFDLGQACAGYLYGLFVAH  133 (353)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCce-EEehhhhhHHHHHHHHHHH
Confidence                3899999999999999999999999999999998 899999999999999986543 7999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      +++++|+.+ ||||++|.+|..+ +|++     +....+|||||+|+||++.+. ..   ..+.+...+.    ..+|.+
T Consensus       134 ~~i~~~~~~-~LVv~~e~~S~~~-~~~d-----~~~~~lFGDGAaA~vl~~~~~-~~---~~~~~~~~~~~~~~~~~p~g  202 (353)
T PRK12880        134 SLIQSGLGK-ILLICGDTLSKFI-HPKN-----MNLAPIFGDGVSATLIEKTDF-NE---AFFELGSDGKYFDKLIIPKG  202 (353)
T ss_pred             HHHHcCCCC-EEEEEehhhhccC-Cccc-----CCceeeecccceEEEEEecCC-CC---ceEEEEecCCCCCeEEecCC
Confidence            999999888 9999999999744 4543     235789999999999997654 21   1244444433    344544


Q ss_pred             cccc-cceeec-----------CceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410          259 ENYI-SGQLKE-----------MGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKT  324 (402)
Q Consensus       259 ~~~~-~~~~~~-----------~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~  324 (402)
                      .... .|....           ....+.+ ++.+|+++.+.++++++++|+++|++. +|| +|++||+|+++++.++++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~HQ~~~~i~~~i~~~  281 (353)
T PRK12880        203 AMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDE-KDIAFHLFHQSNAYLVDCIKEE  281 (353)
T ss_pred             CcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHH
Confidence            3211 111100           0112334 799999999999999999999999997 999 999999999999999999


Q ss_pred             cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410          325 LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF  399 (402)
Q Consensus       325 lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~  399 (402)
                      ||++++|++..  ++++|||++|||+|++|++++++    |+       -++++++||+|++||+++|||.++=|
T Consensus       282 Lgl~~ek~~~~--~l~~~GNtssasip~~L~~~~~~----~~-------~~~ll~~~G~G~s~g~~ll~~~~~~~  343 (353)
T PRK12880        282 LKLNDDKVPNF--IMEKYANLSACSLPALLCELDTP----KE-------FKASLSAFGAGLSWGSAVLNFKDLYT  343 (353)
T ss_pred             hCCCHHHhhhh--hHHhhCCHHHHHHHHHHHHHHHc----CC-------cEEEEEEEchhhhheEeEEEECCcCC
Confidence            99999998743  58999999999999999999875    43       46899999999999999999976543

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=2e-52  Score=406.93  Aligned_cols=312  Identities=20%  Similarity=0.214  Sum_probs=257.2

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.++   ..         .+++.+++||++||++.+++                     
T Consensus         4 ~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~e---------------------   50 (326)
T PRK05963          4 SRIAGFGHAVPDRRVENAEIEAQLG---LE---------TGWIERRTGIRCRRWAAPDE---------------------   50 (326)
T ss_pred             cEEEEEEEECCCCeecHHHHHHHcC---CC---------HHHhhhccCCeEEEEcCCCC---------------------
Confidence            7999999999999999999988752   11         36889999999999997765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ++.+|+++|+++||+++|++++|||+||++|++| +.+|+.+.+|+++||+++..  +++++++|+|+++||++|.
T Consensus        51 ----~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~--~~di~~~C~g~~~aL~~A~  124 (326)
T PRK05963         51 ----TLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG--AIDLAGACAGFLYALVLAD  124 (326)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCc--eeeccchhhHHHHHHHHHH
Confidence                3899999999999999999999999999999999 79999999999999998764  8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeee----eecCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQ----TTVPD  257 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~----~~~p~  257 (402)
                      ++++++ .++||||++|+.+..+ ++.+     +.+..+|||||+|+||++++... ++.  ...+.+.+.    ..+|.
T Consensus       125 ~~l~~~-~~~aLVv~~d~~s~~~-~~~~-----~~~~~lfGDgA~A~ll~~~~~~~~~~l--~~~~~t~~~~~~~~~~~~  195 (326)
T PRK05963        125 GFVRAQ-GKPVLVVAANILSRRI-NMAE-----RASAVLFADAAGAVVLAPSAKANSGVL--GSQLISDGSHYDLIKIPA  195 (326)
T ss_pred             HHHHcC-CCeEEEEEechhhccC-Cccc-----cCceEEEeecceEEEEEecCCCCCceE--EEEEEEcCCCCCeEEeCC
Confidence            999987 5999999999988633 4432     33578999999999999866411 111  112222211    12232


Q ss_pred             Ccccccce--eecCceEEE--eCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcccc
Q 044410          258 TENYISGQ--LKEMGTYCH--LSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKL  332 (402)
Q Consensus       258 ~~~~~~~~--~~~~g~~~~--~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~  332 (402)
                      ......+.  .......+.  .++.+|+.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+.+.||++++|+
T Consensus       196 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~l~l~~~k~  274 (326)
T PRK05963        196 GGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTP-QDIDRFFPHQANARIVDKVCETIGIPRAKA  274 (326)
T ss_pred             CCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCHHHh
Confidence            21111111  011111222  3678898889999999999999999997 999 99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          333 WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       333 ~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      ..   ++++|||+++||+|++|++++++    +++++|   |+|++++||+|++|+++||||
T Consensus       275 ~~---~l~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~~~~~~ll~~  326 (326)
T PRK05963        275 AS---TLETYGNSSAATIPLSLSLANLE----QPLREG---ERLLFAAAGAGMTGGAVVMRV  326 (326)
T ss_pred             hh---hHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEehhhhheeeEEeC
Confidence            76   49999999999999999999987    889999   999999999999999999997

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=100.00  E-value=6.9e-52  Score=410.15  Aligned_cols=319  Identities=21%  Similarity=0.275  Sum_probs=258.5

Q ss_pred             CCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCC
Q 044410           18 SNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPS   97 (402)
Q Consensus        18 ~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~   97 (402)
                      +.+.. ++|.|+|+|+|+++++|+++.+.++   ..         .+||.+++||++||++.+++               
T Consensus        43 ~~~~~-~~I~g~g~~lP~~~v~n~el~~~~~---~~---------~~~i~~~tGi~~R~~~~~~~---------------   94 (379)
T PLN02326         43 RVGSG-SKLVGCGSAVPKLLITNDDLSKLVD---TS---------DEWIATRTGIRNRRVLSGDE---------------   94 (379)
T ss_pred             cccCC-cEEEEEEEECCCceecHHHHHHhcC---Cc---------hhheecccCcceEeecCCCC---------------
Confidence            33444 8999999999999999999988652   11         36789999999999987765               


Q ss_pred             hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHH
Q 044410           98 LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTV  177 (402)
Q Consensus        98 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~a  177 (402)
                                +..+|+.+|+++||+++|++++|||+||++++++...+..+..|+++||+++..  +++++++|+|++.|
T Consensus        95 ----------~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~--~~dv~~~Ca~~~~a  162 (379)
T PLN02326         95 ----------TLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNAL--AFDLTAACSGFVLG  162 (379)
T ss_pred             ----------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCc--eeeccccchHHHHH
Confidence                      389999999999999999999999999999988844456789999999998654  79999999999999


Q ss_pred             HHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee--e--
Q 044410          178 IRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ--T--  253 (402)
Q Consensus       178 l~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~--~--  253 (402)
                      |++|.++|++|..++||||++|.++. +.++.+     +....+|||||+|+||++++. ....-..+.+.+.+.  .  
T Consensus       163 L~~A~~~l~~g~~~~vLVv~~e~~s~-~~~~~d-----~~~~~lfGDGAaAvlL~~~~~-~~~~i~~~~~~t~g~~~~~~  235 (379)
T PLN02326        163 LVTAARFIRGGGYKNVLVIGADALSR-YVDWTD-----RGTCILFGDGAGAVVLQACDD-DEDGLLGFDMHSDGNGHKHL  235 (379)
T ss_pred             HHHHHHHHHcCCCCEEEEEEechhcC-CCCccc-----cCceEEEcceeEEEEEEEcCC-CCCceEEEEEEEcCCCCCeE
Confidence            99999999999999999999999986 434432     234579999999999998764 210001123332211  0  


Q ss_pred             ec--CCCc---------ccccceeecCce-EEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH
Q 044410          254 TV--PDTE---------NYISGQLKEMGT-YCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD  319 (402)
Q Consensus       254 ~~--p~~~---------~~~~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~  319 (402)
                      ..  +...         +...+.....++ .+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|+++++
T Consensus       236 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~  314 (379)
T PLN02326        236 HATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTA-ESIDWLLLHQANQRIID  314 (379)
T ss_pred             EecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHH
Confidence            11  1110         000111111122 2344 788999999999999999999999997 999 9999999999999


Q ss_pred             HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       320 ~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .+++.||++++|+..+   +++||||+|||+|++|++++++    |++++|   |+||+++||+|++|+++||+|
T Consensus       315 ~~~~~Lgl~~ek~~~~---l~~~GNt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~  379 (379)
T PLN02326        315 AVAQRLGIPPEKVISN---LANYGNTSAASIPLALDEAVRS----GKVKKG---DVIATAGFGAGLTWGSAIVRW  379 (379)
T ss_pred             HHHHHcCCCHHHeeec---HhhcCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhheeeEEEEEC
Confidence            9999999999999765   8999999999999999999988    889999   999999999999999999997

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=3.2e-51  Score=398.97  Aligned_cols=314  Identities=20%  Similarity=0.236  Sum_probs=256.1

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.++   ..         .+|+.+++||++||++. ++                     
T Consensus         5 ~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~R~~~~-~~---------------------   50 (329)
T PRK07204          5 ISIKGIGTYLPKRKVDSLELDKKLD---LP---------EGWVLKKSGVKTRHFVD-GE---------------------   50 (329)
T ss_pred             cEEEEEEEeCCCceecHHHHHHhhC---CC---------HhHhhhccCceEEeecC-CC---------------------
Confidence            7999999999999999999987642   11         26889999999999986 44                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+++||+++...++++++++|+|++.||.+|.
T Consensus        51 ----~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~  126 (329)
T PRK07204         51 ----TSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALDTIS  126 (329)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHH
Confidence                3889999999999999999999999999999888 67899999999999998631238999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      +++++|..++||||++|.++..+ ++.+     ....++|||||+|+||++++...++..  ..+...+.    ..+|..
T Consensus       127 ~~l~~g~~~~~Lvv~~e~~s~~~-~~~~-----~~~~~lfGDGAaA~ll~~~~~~~~il~--~~~~t~~~~~~~~~~~~~  198 (329)
T PRK07204        127 YAIECGRYKRVLIISSEISSVGL-NWGQ-----NESCILFGDGAAAVVITKGDHSSRILA--SHMETYSSGAHLSEIRGG  198 (329)
T ss_pred             HHHHCCCCCEEEEEEeccccCCC-Cccc-----CcceEEEecccEEEEEEEcCCCCcEEE--EEEEEecCCCCceEEecC
Confidence            99999999999999999988633 3321     224689999999999998765121110  11111110    011211


Q ss_pred             cccc----cceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcccc
Q 044410          259 ENYI----SGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKL  332 (402)
Q Consensus       259 ~~~~----~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~  332 (402)
                      ...+    .+.....++.+.+ ++++++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.|++|++|+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~H~~~~~~~~~i~~~l~l~~e~~  277 (329)
T PRK07204        199 GTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL-ADIDLIVPHQASGPAMRLIRKKLGVDEERF  277 (329)
T ss_pred             CcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCHHHh
Confidence            1000    1111222334444 688999999999999999999999997 999 99999999999999999999999998


Q ss_pred             HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          333 WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       333 ~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      ..   ++++|||++|||+|++|++++++    |++++|   |+|++++||+|++|++++|||
T Consensus       278 ~~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~ll~~  329 (329)
T PRK07204        278 VT---IFEDHGNMIAASIPVALFEAIKQ----KKVQRG---NKILLLGTSAGLSIGGILLEY  329 (329)
T ss_pred             hh---hHhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeEEeC
Confidence            75   59999999999999999999998    889999   999999999999999999986

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=100.00  E-value=8.8e-51  Score=395.19  Aligned_cols=313  Identities=25%  Similarity=0.304  Sum_probs=254.3

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+|+++.++   ..         ..+|.+++||++||++.+++                     
T Consensus         3 v~I~~~g~~lP~~~v~~~e~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~---------------------   49 (326)
T CHL00203          3 VHILSTGSSVPNFSVENQQFEDIIE---TS---------DHWISTRTGIKKRHLAPSST---------------------   49 (326)
T ss_pred             cEEEEEEEECCCeEEcHHHHHHhcC---CC---------hhhEeeccCeEEEEeCCCCC---------------------
Confidence            7999999999999999999998753   11         25788999999999987765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKD  183 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~  183 (402)
                          +..+|+.+|+++||+++|++++|||.||++++++...+..+..+++.||+.+.+  +++++++|+|++.||++|.+
T Consensus        50 ----~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~--~~~v~~~Casg~~al~~A~~  123 (326)
T CHL00203         50 ----SLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV--AFDITAACSGFILALVTATQ  123 (326)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCc--eeeecccchhHHHHHHHHHH
Confidence                389999999999999999999999999999888843345678999999998754  78999999999999999999


Q ss_pred             HHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee----ecCCCc
Q 044410          184 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT----TVPDTE  259 (402)
Q Consensus       184 ~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~----~~p~~~  259 (402)
                      +|++|..+++|||++|.+|..+ ++++     +....+|||||+|+||++.+. .++.  .+.+...+..    .++...
T Consensus       124 ~i~sg~~~~~Lvv~~e~~s~~~-~~~~-----~~~~~~fgDga~A~ll~~~~~-~~~~--~~~~~t~g~~~~~~~~~~~~  194 (326)
T CHL00203        124 FIQNGSYKNILVVGADTLSKWI-DWSD-----RKTCILFGDGAGAAIIGASYE-NSIL--GFKLCTDGKLNSHLQLMNKP  194 (326)
T ss_pred             HHHcCCCCEEEEEEehhhhCcC-Cccc-----CCceEEEcceeeEEEEEEcCC-CCeE--EEEEEEcCCCcceEEecCCC
Confidence            9999999999999999999644 4443     224689999999999998654 2211  1222222110    111100


Q ss_pred             -c--cccceeecC-ce-EEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcccc
Q 044410          260 -N--YISGQLKEM-GT-YCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKL  332 (402)
Q Consensus       260 -~--~~~~~~~~~-g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~  332 (402)
                       .  .......++ .. .+.+ +++++.+..+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|++|+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~hq~~~~~~~~~~~~lgl~~~k~  273 (326)
T CHL00203        195 VNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI-DEVDWFILHQANKRILEAIANRLSVPNSKM  273 (326)
T ss_pred             CCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHh
Confidence             0  000000001 11 2233 788888888889999999999999997 999 99999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          333 WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       333 ~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      ..   ++++|||++|||+|++|++++++    |++++|   |+|++++||+|++|+++|+||+
T Consensus       274 ~~---~l~~~Gn~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~v~~~~  326 (326)
T CHL00203        274 IT---NLEKYGNTSAASIPLALDEAIQN----NKIQPG---QIIVLSGFGAGLTWGAIVLKWK  326 (326)
T ss_pred             hh---HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence            76   49999999999999999999988    889999   9999999999999999999995

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=2.8e-50  Score=391.64  Aligned_cols=314  Identities=21%  Similarity=0.262  Sum_probs=256.7

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+|+.+.++   ..         .+++++++||++||++.+++                     
T Consensus         5 ~~I~~ig~~~P~~~v~~~e~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~~---------------------   51 (325)
T PRK12879          5 ARITGIGTYVPPRVLTNDDLETFID---TS---------DEWIVQRTGIKERRIAHVEE---------------------   51 (325)
T ss_pred             CEEEEEEEECCCcEEcHHHHHHhcC---CC---------HHHhhhccCceEEEECCCCC---------------------
Confidence            7999999999999999999988642   11         25789999999999997765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|++.||+++..  .++++++|+|++.||.+|.
T Consensus        52 ----~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~--~~~v~~~C~~~~~al~~A~  125 (325)
T PRK12879         52 ----YTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAA--AFDINAACAGFLYGLETAN  125 (325)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EEEECccchHHHHHHHHHH
Confidence                3899999999999999999999999999999987 78899999999999998654  7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..++||||++|+++..+ ++.+     +....+|||||+|+||++++...++.  ...+...+.    .+.+..
T Consensus       126 ~~l~~g~~~~~Lvv~~e~~s~~~-~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  197 (325)
T PRK12879        126 GLITSGLYKKVLVIGAERLSKVT-DYTD-----RTTCILFGDGAGAVVLEATENEPGFI--DYVLGTDGDGGDILYRTGL  197 (325)
T ss_pred             HHHHcCCCCEEEEEEehhhcCcC-Cccc-----cCceEEEeecceEEEEEecCCCCCeE--EEEEEEcCCCCCeEEEcCC
Confidence            99999999999999999988633 3322     22457999999999999877512110  011111110    011111


Q ss_pred             cccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHH
Q 044410          259 ENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASR  336 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~  336 (402)
                      ...........+..+.+ +++++..+.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||++++|+..+ 
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~~-  275 (325)
T PRK12879        198 GTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK-DDIDWVIPHQANLRIIESLCEKLGIPMEKTLVS-  275 (325)
T ss_pred             CCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHhhhh-
Confidence            11000000111222333 678898888999999999999999997 999 99999999999999999999999999874 


Q ss_pred             HHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          337 YVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       337 ~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                        +++|||+++||+|++|++++++    |++++|   |+++++++|+|++|+++|+||+
T Consensus       276 --~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~~~~~~l~~~~  325 (325)
T PRK12879        276 --VEYYGNTSAATIPLALDLALEQ----GKIKPG---DTLLLYGFGAGLTWAALLVKWG  325 (325)
T ss_pred             --HhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEeC
Confidence              8999999999999999999988    889999   9999999999999999999994

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=6.8e-50  Score=391.02  Aligned_cols=320  Identities=17%  Similarity=0.167  Sum_probs=256.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+++.+.+.+......     ....++.+.+||++||+..+++                     
T Consensus         6 v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~-----~~~~~i~~~~Gi~~R~~~~~~~---------------------   59 (338)
T PRK09258          6 VAILSLAYELAPVVVTSSEIEERLAPLYERLR-----LPPGQLEALTGIRERRWWPEGT---------------------   59 (338)
T ss_pred             eEEEEEEecCCCccCcHHHHHHHhhhcccccC-----CChhHhhhhcCceeEecCCCCC---------------------
Confidence            79999999999999999999987543211100     1135688899999999986544                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|++++|||+||++++++ +..|+++.+++++||+++... .++++++|+|++.||++|.
T Consensus        60 ----~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~-~~~v~~~C~~~~~al~~A~  134 (338)
T PRK09258         60 ----QLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCA-NFDVSNACLGFLNGMLDAA  134 (338)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCc-eeehhhhhHHHHHHHHHHH
Confidence                3899999999999999999999999999999987 788999999999999986432 7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCC------ccc----hhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPS------ETH----LDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ  252 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~------~~~----~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~  252 (402)
                      ++|++|..++||||++|+++..+ ++.      +.+    ........+|||||+|+||++.+. ..   ...++.....
T Consensus       135 ~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~-~~---~~~~~~~~~~  209 (338)
T PRK09258        135 NMIELGQIDYALVVSGESAREIV-EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSL-HP---RGHRLLGGVT  209 (338)
T ss_pred             HHHHcCCCCEEEEEEecccchhc-cchhhhhccCccchhhhhhccceEEecccceEEEEecCCC-CC---Ccceeeeeee
Confidence            99999999999999999988632 211      110    111123568999999999998654 21   1133433222


Q ss_pred             eecCCCcccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc
Q 044410          253 TTVPDTENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE  330 (402)
Q Consensus       253 ~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e  330 (402)
                      ...+...+...|.    ...+.+ ++.+++.....++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++
T Consensus       210 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~-~did~~i~H~~~~~~~~~~~~~lgl~~~  284 (338)
T PRK09258        210 RAATEHHELCQGG----RDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAV-EQVDRVICHQVGAAHTRAILKALGIDPE  284 (338)
T ss_pred             ecCCCcccccccC----ccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEecCCCCHHHHHHHHHHhCCCHH
Confidence            2233322222221    112222 567777788888899999999999997 999 999999999999999999999999


Q ss_pred             ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          331 KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       331 k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      |++.+   +++||||++||+|++|++++++    |++++|   |+|++++||+|++|+++++||
T Consensus       285 k~~~~---~~~~GN~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~~~~~  338 (338)
T PRK09258        285 KVFTT---FPTLGNMGPASLPITLAMAAEE----GFLKPG---DRVALLGIGSGLNCSMLEVKW  338 (338)
T ss_pred             Hceeh---HhhhCCcHHhHHHHHHHHHHHh----CCCCCC---CEEEEEEechhHhhHhHeeeC
Confidence            99875   8999999999999999999988    889999   999999999999999999997

>PLN02932 3-ketoacyl-CoA synthase

Probab=100.00  E-value=5.3e-49  Score=392.23  Aligned_cols=352  Identities=18%  Similarity=0.245  Sum_probs=271.1

Q ss_pred             CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhh----cCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410           21 GPTATILAIGTSTPPN--CFYQADYPDFYFRV----TNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE   94 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~   94 (402)
                      +| +|++..++|.|+.  +++.+.+.+.....    ...+..++..+..+||.+++||.+|++..+..           .
T Consensus        66 ~~-vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~-----------~  133 (478)
T PLN02932         66 KP-VYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGL-----------Q  133 (478)
T ss_pred             Cc-EEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeecccc-----------c
Confidence            67 9999999999876  68888888776432    11111133367789999999999999985432           1


Q ss_pred             CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccch
Q 044410           95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYM  173 (402)
Q Consensus        95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~  173 (402)
                      ..+++++++.+++.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||++++.. .++++ +||+|
T Consensus       134 ~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~-~fdL~gmGCSg  212 (478)
T PLN02932        134 CLPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK-SLNLGGMGCSA  212 (478)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce-EEEeccchhhh
Confidence            12478899999999999999999999999999999999999999999999999999999999986654 78998 89999


Q ss_pred             HHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee
Q 044410          174 GGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT  253 (402)
Q Consensus       174 ~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~  253 (402)
                      ++.||++|++++++++.++||||++|.+|..+ ++.+ +++.+.+.++|||||+|+||++.+....  ...+++......
T Consensus       213 gl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~r~~l~t~~LFgDGAAAvlLs~~~~~~~--~~~~~L~~~v~t  288 (478)
T PLN02932        213 GVIAIDAAKSLLQVHRNTYALVVSTENITQNL-YLGN-NKSMLVTNCLFRIGGAAILLSNRSRDRK--RAKYELVHTVRV  288 (478)
T ss_pred             HHHHHHHHHHHHHcCCCCeEEEEEEeeccccc-CCCc-chhhhccceeecccceEEEEeccccccc--CcceEEEeeeee
Confidence            99999999999999999999999999999765 3433 3455678899999999999998653111  234566543332


Q ss_pred             ec---CCCcccccceeecCce-EEEeCCchhHHHHHhHHHHH----------------------HHhhcc--CCCCC--C
Q 044410          254 TV---PDTENYISGQLKEMGT-YCHLSRDVPVAIGNYVDKCL----------------------SNAMSP--IGISD--W  303 (402)
Q Consensus       254 ~~---p~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~--~gl~~--~  303 (402)
                      +.   +.+.+.+.+..+++|. .+.++++++..+.+.++..+                      +++++.  .++.+  .
T Consensus       289 ~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~  368 (478)
T PLN02932        289 HTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFK  368 (478)
T ss_pred             eeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHH
Confidence            22   2222223333333443 55666666655444433111                      111111  12221  1


Q ss_pred             cce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEc
Q 044410          304 NSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG  382 (402)
Q Consensus       304 ~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G  382 (402)
                      ++| +|++||+|+++++.+++.||++++++..++.++++||||+|+|+++.|+++.++    |++++|   |+|++++||
T Consensus       369 ~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~----grik~G---d~vl~iaFG  441 (478)
T PLN02932        369 LAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMKKG---DRIWQIALG  441 (478)
T ss_pred             hhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEe
Confidence            457 999999999999999999999997776667789999999999999999999887    999999   999999999


Q ss_pred             ccccceeeEEeeec
Q 044410          383 PGLTVETVVLQSVS  396 (402)
Q Consensus       383 ~G~~~~~~ll~~~~  396 (402)
                      +|++|++++||...
T Consensus       442 sGf~~~s~vw~~~~  455 (478)
T PLN02932        442 SGFKCNSSVWVALR  455 (478)
T ss_pred             ccHHHHHHHHHHhc
Confidence            99999999998644

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=100.00  E-value=1.9e-48  Score=377.81  Aligned_cols=306  Identities=24%  Similarity=0.303  Sum_probs=253.3

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++++++.+.++   .         ..+++.+++||++||++.+++                     
T Consensus         2 ~~I~~i~~~lP~~~~~~~~~~~~~~---~---------~~~~~~~~~Gi~~r~~~~~~~---------------------   48 (320)
T cd00830           2 ARILGIGSYLPERVVTNDELEKRLD---T---------SDEWIRTRTGIRERRIADPGE---------------------   48 (320)
T ss_pred             CEEEEEEEECCCcEEcHHHHHHHcC---C---------CHHHhhhccCceEEeeCCCCC---------------------
Confidence            6899999999999999999988752   1         136788999999999997755                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|+++++||.||++++++ +..|+.+.+|+.+||+++.+  +++++++|++++.||.+|.
T Consensus        49 ----~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~--~~~v~~~C~s~~~al~~A~  122 (320)
T cd00830          49 ----TTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAA--AFDINAACSGFLYGLSTAA  122 (320)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EeeccccchHHHHHHHHHH
Confidence                3899999999999999999999999999999888 66899999999999998544  7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI  262 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  262 (402)
                      ++|++|+.++||||++|.++..+ ++.+     +...++|||||+|+||++.+...+       +........+...+.+
T Consensus       123 ~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~-------i~~~~~~~~~~~~~~~  189 (320)
T cd00830         123 GLIRSGGAKNVLVVGAETLSRIL-DWTD-----RSTAVLFGDGAGAVVLEATEEDPG-------ILDSVLGSDGSGADLL  189 (320)
T ss_pred             HHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEecCCCCc-------EEEEEEEEcCCCCCeE
Confidence            99999999999999999998643 3321     235689999999999998765111       1111111122222111


Q ss_pred             cce---------e-ecCceEEE-eCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc
Q 044410          263 SGQ---------L-KEMGTYCH-LSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE  330 (402)
Q Consensus       263 ~~~---------~-~~~g~~~~-~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e  330 (402)
                      .+.         . ...+..+. .++.++..+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||++++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgl~~~  268 (320)
T cd00830         190 TIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTP-DDIDWFVPHQANLRIIEAVAKRLGLPEE  268 (320)
T ss_pred             EeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHH
Confidence            111         0 11112233 3788998888999999999999999997 999 999999999999999999999999


Q ss_pred             ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410          331 KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       331 k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll  392 (402)
                      |+..   ++++|||+++||+|++|++++++    |++++|   |+++++++|+|++|+++++
T Consensus       269 ~~~~---~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~l~  320 (320)
T cd00830         269 KVVV---NLDRYGNTSAASIPLALDEAIEE----GKLKKG---DLVLLLGFGAGLTWGAALL  320 (320)
T ss_pred             Hhhh---hHHhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchHHhhHHhhC
Confidence            9975   49999999999999999999998    889999   9999999999999999875

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=100.00  E-value=6.2e-48  Score=374.09  Aligned_cols=310  Identities=22%  Similarity=0.275  Sum_probs=256.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++++++.+.++   ..         ..++++++||++||+..+++                     
T Consensus         3 ~~I~~i~~~~P~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~---------------------   49 (318)
T TIGR00747         3 AGILGTGSYLPEKVLTNADLEKMVD---TS---------DEWIVTRTGIKERRIAADDE---------------------   49 (318)
T ss_pred             CEEEEEEEECCCceecHHHHHHhcC---Cc---------hHHeecccCceEEEECCCCC---------------------
Confidence            7899999999999999999988752   11         25688899999999987765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ++.+|+.+|+++||+++|++++|||.|+++++++ +..|+.+.+++..||+++.+  +++++++|++++.||++|.
T Consensus        50 ----~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~--~~~v~~~C~s~~~al~~A~  123 (318)
T TIGR00747        50 ----TSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIP--AFDLSAACAGFIYALSVAK  123 (318)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCc--EeehhhhhHHHHHHHHHHH
Confidence                3899999999999999999999999999999888 77899999999999998754  7889999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..+++||+++|+++..+ ++.+     +....+|||||+|+||++++...++  ..+.+...+.    ..+|..
T Consensus       124 ~~i~~g~~~~~Lvv~~e~~~~~~-~~~~-----~~~~~~~GDGAaA~lL~~~~~~~~i--~~~~~~~~~~~~~~~~~~~~  195 (318)
T TIGR00747       124 QYIESGKYKTVLVVGAEKLSSTL-DWTD-----RGTCVLFGDGAGAVVLGESEDPGGI--ISTHLGADGTQGEALYLPAG  195 (318)
T ss_pred             HHHHcCCCCEEEEEEehhhcCcC-CcCC-----CCeEEEEecceeEEEEeecCCCCcE--EEEEEEEcCCCcceEEECCC
Confidence            99999999999999999988533 3332     1235789999999999987751111  1122222211    123332


Q ss_pred             cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410          259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY  337 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~  337 (402)
                      ...   .....++....++++++...+.+.++++++|+++|+++ +|| +|++||++.++++.+++.||+|++|++.+  
T Consensus       196 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~~--  269 (318)
T TIGR00747       196 GRP---TSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDP-EDIDWFVPHQANLRIIEALAKRLELDMSQVVKT--  269 (318)
T ss_pred             CcC---CCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHeeeh--
Confidence            211   01112233344788888888899999999999999997 999 99999999999999999999999999864  


Q ss_pred             HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                       +++|||+++||+|++|++++++    |++++|   |+|+++++|+|++|+++++||
T Consensus       270 -~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~t~~~~~l~~  318 (318)
T TIGR00747       270 -VHKYGNTSAASIPLALDELLRT----GRIKPG---DLLLLVAFGGGLTWGAALVRF  318 (318)
T ss_pred             -HhhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeeEEEEEC
Confidence             9999999999999999999998    889999   999999999999999999997

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>PRK06840 hypothetical protein; Validated

Probab=100.00  E-value=2e-47  Score=373.66  Aligned_cols=317  Identities=17%  Similarity=0.148  Sum_probs=245.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.++   ..         .+++.+++||++||++.+++                     
T Consensus         5 v~I~~~~~~lP~~~v~~~~l~~~~g---~~---------~~~~~~~~Gi~~r~~~~~~~---------------------   51 (339)
T PRK06840          5 VGIVGTGVYLPKDVMTAEEIAEKTG---IP---------EEVVIEKFGIYEKPVPGPED---------------------   51 (339)
T ss_pred             eEEEEEEEeCCCcccCHHHHHHHhC---CC---------HHHHhhhcCcceEeeCCCCC---------------------
Confidence            8999999999999999999987652   11         26778899999999997655                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecC-C-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFY-G-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLA  181 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~-~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A  181 (402)
                          +..+|+.+|+++||+++|++++|||+||+++++ + +..|+.+.+|+++||+++..  +++++++|++++.||.+|
T Consensus        52 ----~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~--~~~v~~~C~~~~~al~~A  125 (339)
T PRK06840         52 ----HTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAW--AFDIMAVCASFPIALKVA  125 (339)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCcc--cccccccchHHHHHHHHH
Confidence                389999999999999999999999999987654 4 67899999999999998654  788999999999999999


Q ss_pred             HHHHHc-CCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecC
Q 044410          182 KDIAEN-NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVP  256 (402)
Q Consensus       182 ~~~i~~-g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p  256 (402)
                      .++|++ |..+++|||++|+.+..+ ++.++  ... ..++|||||+|+||++++...++.  ...+...+.    ..+|
T Consensus       126 ~~~l~~~g~~~~~Lvv~~~~~s~~~-~~~~~--~~~-~~~~~GDgAaA~ll~~~~~~~~il--~~~~~t~~~~~~~~~~~  199 (339)
T PRK06840        126 KDLLYSDPSIENVLLVGGYRNSDLV-DYDNP--RTR-FMFNFAAGGSAALLKKDAGKNRIL--GSAIITDGSFSEDVRVP  199 (339)
T ss_pred             HHHHhcCCCccEEEEEeeccccccc-CcCCC--Cee-eeccCCCceeEEEEEecCCCCceE--EEEEEEcCCccceEEec
Confidence            999999 778999999999988633 33221  111 113479999999999876511110  011111111    1122


Q ss_pred             CCcc--cccceeecCc-eEEEe-CCchhHH-----HHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcC
Q 044410          257 DTEN--YISGQLKEMG-TYCHL-SRDVPVA-----IGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLG  326 (402)
Q Consensus       257 ~~~~--~~~~~~~~~g-~~~~~-~~~v~~~-----~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lg  326 (402)
                      ....  .........+ ..+.+ +++.+..     ....++++++++|+++|+++ +|| +|++||.|.++++.++++||
T Consensus       200 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~Lg  278 (339)
T PRK06840        200 AGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTP-KDIDYLAILHMKRSAHIALLEGLG  278 (339)
T ss_pred             CCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCcCHHHHHHHHHHcC
Confidence            1111  1000000111 12222 3444542     23467899999999999997 999 99999999999999999999


Q ss_pred             CCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410          327 LRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       327 i~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                      ++++|+.    ++++||||+|+|+|++|++++++    |++++|   |++++++||+|++|+++++||.++
T Consensus       279 l~~~~~~----~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~ill~~~G~G~s~~~~~l~~~~~  338 (339)
T PRK06840        279 LTEEQAI----YLDEYGHLGQLDQILSLHLALEQ----GKLKDG---DLVVLVSAGTGYTWAATVIRWGPV  338 (339)
T ss_pred             CCHHHeE----eHHhccchhhhhHHHHHHHHHHc----CCCCCC---CEEEEEEEehhhheeEEEEEecCC
Confidence            9999985    38999999999999999999987    889999   999999999999999999999754

>PLN02377 3-ketoacyl-CoA synthase

Probab=100.00  E-value=2.1e-46  Score=375.61  Aligned_cols=351  Identities=17%  Similarity=0.217  Sum_probs=261.0

Q ss_pred             CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410           21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL   98 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~   98 (402)
                      +| +|++..++|.|+.  +++.+.+.+.......-+  ++..+...++.+++||.+..+. |....          ..+.
T Consensus        96 ~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~ri~~~sgig~~t~~-p~~~~----------~~~~  161 (502)
T PLN02377         96 RP-VYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFD--DSSLEFQRKILERSGLGEDTYV-PEAMH----------YIPP  161 (502)
T ss_pred             CC-EEEEeeeeecCCccccccHHHHHHHHHHhCCCC--HHHHHHHHHHHHhcCCCCcccc-Cchhc----------cCCc
Confidence            57 9999999999876  688888888765332111  3445667899999999885444 43210          1235


Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeec-cccchHHH
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYMGGT  176 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~~~~  176 (402)
                      +..++.+.+.+.+++..|+++||+++|++|+|||+||+ ++++ +..|+++.+|+++||++++.. .++++ +||+|++.
T Consensus       162 ~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~-afdL~gmGCsggl~  239 (502)
T PLN02377        162 RPSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIR-SFNLGGMGCSAGVI  239 (502)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCe-EEecccchhhHHHH
Confidence            56899999999999999999999999999999999987 7888 689999999999999986654 88998 79999999


Q ss_pred             HHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCC-ceEEEeeeeeec
Q 044410          177 VIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESP-LFQILSCTQTTV  255 (402)
Q Consensus       177 al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~-~~~~~~~~~~~~  255 (402)
                      ||++|++++++++.++||||++|.+|..+ ++.+ ++...+..++|||||+|+||++.+........ .+.+........
T Consensus       240 aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d  317 (502)
T PLN02377        240 AVDLAKDMLQVHRNTYAVVVSTENITQNW-YFGN-KKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGAD  317 (502)
T ss_pred             HHHHHHHHHHcCCCCEEEEEEEecccccc-CCCC-CccccccceeeccccEEEEEecccccccccccccceEEEEEEEEc
Confidence            99999999999999999999999999755 3443 23334456899999999999985431110000 112332222111


Q ss_pred             CCCcccccceeecCc-eEEEe-------------------CCch-------hHHHHHhHHHHHHHhhccCC-CCCCcce-
Q 044410          256 PDTENYISGQLKEMG-TYCHL-------------------SRDV-------PVAIGNYVDKCLSNAMSPIG-ISDWNSL-  306 (402)
Q Consensus       256 p~~~~~~~~~~~~~g-~~~~~-------------------~~~v-------~~~~~~~~~~~i~~~L~~~g-l~~~~di-  306 (402)
                      +...+.+.+...+.| ..+.+                   ++.+       +.++...+++.+++.++..+ ... +++ 
T Consensus       318 ~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~-~did  396 (502)
T PLN02377        318 DKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFK-LAFD  396 (502)
T ss_pred             CCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcH-hhcC
Confidence            111111111100011 01111                   2222       33455566677777776654 333 678 


Q ss_pred             EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEccccc
Q 044410          307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLT  386 (402)
Q Consensus       307 ~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~  386 (402)
                      +|++||+|+++++.+++.||+++++...++.++++||||+|+|+++.|+++.++    |++++|   |+|++++||+|++
T Consensus       397 hf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~----grik~G---d~VlliaFGsGf~  469 (502)
T PLN02377        397 HFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK----GRMRKG---NRVWQIAFGSGFK  469 (502)
T ss_pred             EEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHc----CCCCCC---CeEEEEEEccccE
Confidence            999999999999999999999986555566679999999999999999999987    999999   9999999999999


Q ss_pred             ceeeEEeeecc
Q 044410          387 VETVVLQSVST  397 (402)
Q Consensus       387 ~~~~ll~~~~~  397 (402)
                      |++++|||...
T Consensus       470 ~~s~v~~~~~~  480 (502)
T PLN02377        470 CNSAVWEALRH  480 (502)
T ss_pred             eeeEEEEEecC
Confidence            99999999653

>PRK04262 hypothetical protein; Provisional

Probab=100.00  E-value=2e-47  Score=374.48  Aligned_cols=303  Identities=17%  Similarity=0.210  Sum_probs=242.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.++   ..         .+|+.+++||++||++.+++                     
T Consensus         3 v~I~~~g~ylP~~~v~~~el~~~~~---~~---------~~~i~~~~Gi~~R~~~~~~~---------------------   49 (347)
T PRK04262          3 VGIVGYGAYIPRYRIKVEEIARVWG---DD---------PEAIKRGLGVEEKSVPGPDE---------------------   49 (347)
T ss_pred             eeEEEEEEeCCCEEecHHHHHHHhC---cC---------HHHHhhccCeeeeecCCCCc---------------------
Confidence            7999999999999999999998752   11         37899999999999997766                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+++||+++... +++++++|+|++.+|++|.
T Consensus        50 ----~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~-~~dv~~~C~~~~~aL~~A~  124 (347)
T PRK04262         50 ----DTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLT-AADLEFACKAGTAALQAAM  124 (347)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCce-EEEHHHhHHHHHHHHHHHH
Confidence                3899999999999999999999999999999988 788999999999999986432 7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI  262 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  262 (402)
                      ++|++|+.++||||++|+...   +|.+     . ...+|||||+|+||+.++.       ..++...... .++..+.+
T Consensus       125 ~~i~sg~~~~aLVv~~e~~~~---~~~~-----~-~~~~~GDGA~A~ll~~~~~-------~~~i~~~~~~-~~d~~d~~  187 (347)
T PRK04262        125 GLVKSGMIKYALAIGADTAQG---APGD-----A-LEYTAAAGGAAFIIGKEEV-------IAEIEATYSY-TTDTPDFW  187 (347)
T ss_pred             HHHHcCCCCEEEEEEEeeecc---CCCC-----C-CCCcCCCCcEEEEEecCcc-------cceeeccccc-cccchhhc
Confidence            999999999999999998432   3322     1 1346899999999997543       1223221111 11111111


Q ss_pred             c---ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHH
Q 044410          263 S---GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYV  338 (402)
Q Consensus       263 ~---~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~  338 (402)
                      .   +.....+..  +...  ....+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|++.++ +
T Consensus       188 ~~~~~~~~~~~~~--~~~~--~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~-~  261 (347)
T PRK04262        188 RREGEPYPRHGGR--FTGE--PAYFKHIISAAKGLMEKLGLKP-SDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGL-L  261 (347)
T ss_pred             CCCCCcCCCcCce--ecch--HHHHHHHHHHHHHHHHHhCcCH-HHhceeecCCCchHHHHHHHHHcCCCHHHhhccc-h
Confidence            1   000111111  1111  1233578899999999999997 999 999999999999999999999999998653 4


Q ss_pred             HHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          339 LREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       339 l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      +++||||+|||+|++|++++++      +++|   |+|++++||+|++|++++++|.+
T Consensus       262 ~~~~GNt~sAsi~~~L~~~~~~------~~~G---d~vll~~~G~G~~~~~~~~~~~~  310 (347)
T PRK04262        262 TPYIGNTYSGSALLGLAAVLDV------AKPG---DRILVVSFGSGAGSDAFSITVTD  310 (347)
T ss_pred             hhhhCChHHHHHHHHHHHHHHh------CCCC---CEEEEEecCCCcceeeEEEEech
Confidence            7999999999999999998864      6788   99999999999999999999854

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=7.3e-47  Score=366.72  Aligned_cols=310  Identities=24%  Similarity=0.282  Sum_probs=255.4

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++++++.+..+   ..         ..+|.+++||++|+++.+++                     
T Consensus         4 v~I~ai~~~lP~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~---------------------   50 (319)
T PRK09352          4 AKILGTGSYLPERVVTNDDLEKMVD---TS---------DEWIVTRTGIKERRIAAPDE---------------------   50 (319)
T ss_pred             eEEEEEEEECCCeEEcHHHHHHHcC---CC---------HHHhhhhcCeEEEEeCCCCC---------------------
Confidence            7999999999999999999998742   11         25788899999999987765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.+|+..||+.+.+  .++++++|++++.||..|.
T Consensus        51 ----~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~--~~~v~~~Casg~~al~~A~  124 (319)
T PRK09352         51 ----TTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAA--AFDLSAACSGFVYALSTAD  124 (319)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCc--EeeccccchhHHHHHHHHH
Confidence                3899999999999999999999999999999887 66889999999999997644  7888999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee----ecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT----TVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~----~~p~~  258 (402)
                      ++|++|..++|||+++|+++..+ ++.+     +....+|||||+|+||++++. .+.  ..+++...+..    .+|..
T Consensus       125 ~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~gDGaaA~ll~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~  195 (319)
T PRK09352        125 QFIRSGAYKNVLVIGAEKLSRIV-DWTD-----RSTCVLFGDGAGAVVLGASEE-PGI--LSTHLGSDGSYGDLLYLPGG  195 (319)
T ss_pred             HHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEEcCC-CCe--EEEEEEEcCCCCCeEEeCCC
Confidence            99999999999999999988633 3322     224579999999999999875 221  11233322211    22332


Q ss_pred             cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410          259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY  337 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~  337 (402)
                      .....+.   .++....++++++...+.+.++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++++..   
T Consensus       196 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~---  268 (319)
T PRK09352        196 GSRGPAS---PGYLRMEGREVFKFAVRELAKVAREALEAAGLTP-EDIDWLVPHQANLRIIDATAKKLGLPMEKVVV---  268 (319)
T ss_pred             CCCCCCC---CCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh---
Confidence            2111110   1111223677888888889999999999999997 999 9999999999999999999999999865   


Q ss_pred             HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      ++.+|||++++|++++|++++++    |++++|   |+++++++|+|++|+++++||+
T Consensus       269 ~~~~~Gn~~~a~~~~~L~~~~~~----g~~~~G---d~vll~s~G~G~~~~~~ll~~~  319 (319)
T PRK09352        269 TVDKYGNTSAASIPLALDEAVRD----GRIKRG---DLVLLEGFGGGLTWGAALVRWP  319 (319)
T ss_pred             hHHhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeC
Confidence            49999999999999999999998    889999   9999999999999999999995

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=4.6e-47  Score=375.58  Aligned_cols=330  Identities=17%  Similarity=0.214  Sum_probs=253.9

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+++.+.+.......     ....+||++++||++||++.+++.   .+.              
T Consensus         3 v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~-----~~~~~~i~~~~Gi~~R~~~~~~~~---~~~--------------   60 (378)
T PRK06816          3 VYITSTGAFLPGEPVSNDEMEAYLGLINGKP-----SRARRIILRNNGIKTRHYALDPEG---RPT--------------   60 (378)
T ss_pred             eEEEeeeecCCCCccCHHHHHHHHhhccCCc-----HHHHHHHHHhCCCceEEEEECCCC---CCC--------------
Confidence            7999999999999999999988764322111     112368999999999999875421   111              


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                         .+..+|+.+|+++||+++|++++|||+||++++++ +..|+.+..|+++||+++..  +++++++|+|++.||++|.
T Consensus        61 ---~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~--~~~v~~~Cas~~~al~~A~  135 (378)
T PRK06816         61 ---HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIE--VVSSAGVCAAGMMALKYAY  135 (378)
T ss_pred             ---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCc--eeeecCcCHHHHHHHHHHH
Confidence               14789999999999999999999999999999988 78899899999999998754  7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccc------------h----hhhhhhhhhccCcEEEEEccCCCCCCCCCCceE
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETH------------L----DVLVVQAVFGDGAGAAIIGADSDISNHESPLFQ  246 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~------------~----~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~  246 (402)
                      ++|++|+.++||||++|++|..+ ++.+.+            .    +.....++|||||+|+||++.+...+.   .+.
T Consensus       136 ~~i~sg~~~~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~---~l~  211 (378)
T PRK06816        136 LSVKAGESRNAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGL---SLR  211 (378)
T ss_pred             HHHHCCCCCEEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCc---eEE
Confidence            99999999999999999998643 222100            0    000113479999999999976551121   122


Q ss_pred             E--Eeeeee------ec-CCCc-----ccccceee------cCc-eEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCc
Q 044410          247 I--LSCTQT------TV-PDTE-----NYISGQLK------EMG-TYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWN  304 (402)
Q Consensus       247 ~--~~~~~~------~~-p~~~-----~~~~~~~~------~~g-~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~  304 (402)
                      +  ....+.      .. +...     ....|...      .++ ..+.+ ++.+++.+...++++++++|+++|+++ +
T Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~  290 (378)
T PRK06816        212 IDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLDP-D  290 (378)
T ss_pred             EEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCCh-h
Confidence            1  111110      01 1100     01122210      011 12222 566777788888999999999999997 9


Q ss_pred             ce-EEEEcCCCHHHHHHHHHHc-----CCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEE
Q 044410          305 SL-FYVVHPGGDGLLDQVEKTL-----GLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVL  378 (402)
Q Consensus       305 di-~~i~H~~~~~~~~~~~~~l-----gi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll  378 (402)
                      || +|++||+|.++++.+.++|     |+|++|++.+   +++||||+|||+|++|++++++    |++++|   |+|++
T Consensus       291 DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~~---~~~~GNt~sAsipi~L~~a~~~----g~~~~G---d~vl~  360 (378)
T PRK06816        291 DIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFTN---LATVGNTGSASIYIMLDELLNS----GRLKPG---QKILC  360 (378)
T ss_pred             hCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEEe---ccccccccchHHHHHHHHHHHc----CCCCCC---CEEEE
Confidence            99 9999999999999999987     9999999864   9999999999999999999998    999999   99999


Q ss_pred             EEEccc-ccceeeEEeee
Q 044410          379 FGFGPG-LTVETVVLQSV  395 (402)
Q Consensus       379 ~~~G~G-~~~~~~ll~~~  395 (402)
                      ++.|+| +++|.++|.|.
T Consensus       361 ~~~~s~~~~~~~~~~~~~  378 (378)
T PRK06816        361 FVPESGRFSTAFMLLTVV  378 (378)
T ss_pred             EEecccchhheeEEEEEC
Confidence            988776 99999999984

>PLN02854 3-ketoacyl-CoA synthase

Probab=100.00  E-value=4.3e-46  Score=373.22  Aligned_cols=350  Identities=17%  Similarity=0.237  Sum_probs=260.9

Q ss_pred             CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410           21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL   98 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~   98 (402)
                      +| +|++..++|.|+.  +++.+.+.+.......-  .++..+...++.+++|+.+..+..+.-.           ....
T Consensus       112 ~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~sg~g~~ty~P~~~~-----------~~~~  177 (521)
T PLN02854        112 KP-VYLVDFACYKPEDERKISVDSFLTMTEENGSF--EDETVQFQRRISTRSGLGDETYLPRGIT-----------SRPP  177 (521)
T ss_pred             Cc-EEEEeeeeecCCccccccHHHHHHHHHHcCCC--CHHHHHHHHHHHHhcCCCCccccCcccc-----------CCCC
Confidence            56 9999999999876  68888888876533211  1344567789999999998888644321           0112


Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeec-cccchHHH
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYMGGT  176 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~~~~  176 (402)
                      +..++..++.+......|++++|+++|++|+|||+||++ +++ +..|+++.+|+++||++++.. .++++ +||+|++.
T Consensus       178 ~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~-afdLsgmGCSggl~  255 (521)
T PLN02854        178 NLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIK-SYNLGGMGCSAGLI  255 (521)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCce-EEecccchhhhHHH
Confidence            346777888899999999999999999999999999985 667 689999999999999986654 78987 89999999


Q ss_pred             HHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeec-
Q 044410          177 VIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTV-  255 (402)
Q Consensus       177 al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~-  255 (402)
                      ||++|++++++++.++||||++|.+|.+++.  .+|++...+.++|||||+|+||++.+...+  ...+++......++ 
T Consensus       256 aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~--g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~--~~k~~L~~~v~t~~~  331 (521)
T PLN02854        256 SIDLANDLLKANPNSYAVVVSTENITLNWYF--GNDRSMLLCNCIFRMGGAAVLLSNKARDRK--RSKYQLVHTVRTHKG  331 (521)
T ss_pred             HHHHHHHHHHhCCCCeEEEEEEeeeecCCCC--CCchhhhcceeeeccceeEEEEeccccccc--ccchheeeEEEEEEe
Confidence            9999999999999999999999999965532  123444455889999999999998653111  12233322111111 


Q ss_pred             --CCCcccccceeecCce-------------------EE-EeCCchhHHHHHh--HHHHHHHhhccCCCCCC-----cce
Q 044410          256 --PDTENYISGQLKEMGT-------------------YC-HLSRDVPVAIGNY--VDKCLSNAMSPIGISDW-----NSL  306 (402)
Q Consensus       256 --p~~~~~~~~~~~~~g~-------------------~~-~~~~~v~~~~~~~--~~~~i~~~L~~~gl~~~-----~di  306 (402)
                        +...+.+.+..+..|.                   .+ ++++.++......  +..++++.|.++|+++.     +++
T Consensus       332 ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~di  411 (521)
T PLN02854        332 ADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAF  411 (521)
T ss_pred             eCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccC
Confidence              1111111110000110                   11 1244454433222  46678888999998742     468


Q ss_pred             -EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccc
Q 044410          307 -FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGL  385 (402)
Q Consensus       307 -~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~  385 (402)
                       ||++||+|+++++.+++.||+++++...++.++++||||+|+|+|+.|+++.++    |++++|   |+|++++||+|+
T Consensus       412 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~k----Grik~G---D~Vl~iaFGsGf  484 (521)
T PLN02854        412 EHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAK----GRVSAG---DRVWQIAFGSGF  484 (521)
T ss_pred             cEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhh
Confidence             999999999999999999999954444444569999999999999999999988    999999   999999999999


Q ss_pred             cceeeEEeeecc
Q 044410          386 TVETVVLQSVST  397 (402)
Q Consensus       386 ~~~~~ll~~~~~  397 (402)
                      +|++++|||...
T Consensus       485 t~~sav~~~~~~  496 (521)
T PLN02854        485 KCNSAVWKALRE  496 (521)
T ss_pred             hhhheeeEEecc
Confidence            999999999764

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=100.00  E-value=8.9e-47  Score=368.98  Aligned_cols=304  Identities=16%  Similarity=0.155  Sum_probs=238.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|.|+|+++++|+++.+.++   ..         .+|+.+++||++|+++.+++                     
T Consensus         2 ~~I~g~g~~lP~~~v~n~~l~~~~~---~~---------~~~i~~~~Gi~~r~v~~~~~---------------------   48 (345)
T TIGR00748         2 AGIVGYGAYIPMYRIKVEEIARVWG---KD---------PESISNGLPVEEKAVPGLDE---------------------   48 (345)
T ss_pred             ccEEEEEEeCCCeeecHHHHHHHhC---CC---------HhHeeeccceeeeecCCCCC---------------------
Confidence            5899999999999999999987642   11         36889999999999997766                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+++|+++||+++|++++|||+||++++++ +..|..+..+++.||+++... .++++++|+|++.||++|.
T Consensus        49 ----~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~-~~dv~~aC~g~~~al~~A~  123 (345)
T TIGR00748        49 ----DTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLT-AADLEFACKAGTAGIQACM  123 (345)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCce-EEEHHHhHHHHHHHHHHHH
Confidence                3899999999999999999999999999999888 778999999999999974432 7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee--cCCCcc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT--VPDTEN  260 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~  260 (402)
                      ++|++|..++||||++|+.+.   +|.+     . ...+|||||+|+||++.+. .      ..+.......  .|+...
T Consensus       124 ~~i~sg~~~~vLVv~~d~~~~---~~~~-----~-~~~~~GDGAaA~vl~~~~~-~------~~~~~~~~~~~d~~~~~~  187 (345)
T TIGR00748       124 GLVASGMIKYGLAIGADTAQG---APGD-----A-LEYTAGAGGAAYIIGEKNT-V------AYFEGTYSYTTDTPDFWR  187 (345)
T ss_pred             HHHHcCCCCEEEEEEEeeccc---CCCc-----c-CcccCCCceEEEEEccCCc-c------eEeecccceecccccccc
Confidence            999999999999999999874   2322     1 2367899999999997553 1      1121111000  000000


Q ss_pred             cccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHH
Q 044410          261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVL  339 (402)
Q Consensus       261 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l  339 (402)
                      .........+..+.....+++    .+.++++++|+++|+++ +|| +|++||+|.++++.+.+.||+|++|++.+. .+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~~~gl~~-~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~-~~  261 (345)
T TIGR00748       188 REGEPYPRHGGRFTGEPAYFH----HVVTAAKGLMEKLGLTP-EDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGL-LT  261 (345)
T ss_pred             cCCCcCCCcCCeecChHHHHH----HHHHHHHHHHHHcCCCH-HHcCEEEeCCCChHHHHHHHHHcCCCHHHeeccc-cc
Confidence            000000000101111123444    34478899999999997 999 999999999999999999999999998751 13


Q ss_pred             HhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          340 REYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       340 ~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      ++||||+|||+|++|+++++.      +++|   |+|++++||+|++|++++++|.+
T Consensus       262 ~~~GNt~sAsipl~L~~~~~~------~~~G---d~vll~~~G~G~s~~~~~~~~~~  309 (345)
T TIGR00748       262 PRIGNTYSGATPVGLSAVLDI------AEPG---DRILAVSYGSGAGSDAFSIVVQD  309 (345)
T ss_pred             cccCchhhhHHHHHHHHHHHh------cCCC---CEEEEEEecCCcceeEEEEEEch
Confidence            899999999999999998864      7889   99999999999999999999964

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PLN02192 3-ketoacyl-CoA synthase

Probab=100.00  E-value=1.2e-45  Score=369.21  Aligned_cols=351  Identities=18%  Similarity=0.234  Sum_probs=263.1

Q ss_pred             CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410           21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL   98 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~   98 (402)
                      +| +|++..++|.|+.  +++.+.+.+.......-  .++..+...++.+++|+.+..+..+.- ...          ..
T Consensus       100 ~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~sglg~~t~~p~~~-~~~----------~~  165 (511)
T PLN02192        100 RP-VYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSF--TEENLEFQRKILERSGLGESTYLPEAV-LNV----------PP  165 (511)
T ss_pred             Cc-EEEEeeeeecCCccccccHHHHHHHHHHcCCC--CHHHHHHHHHHHHhcCCCCcccCChhh-ccC----------CC
Confidence            56 9999999999887  68888888876533211  134456778999999999988875432 111          11


Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cccchHHHH
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT-QGCYMGGTV  177 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~C~~~~~a  177 (402)
                      +.-++..++.+..++..|+++||+++|++|+|||.||++++..+..|+++.+|+++||++.+.. .++++ +||+|++.|
T Consensus       166 ~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~-afdLsgmGCSggl~a  244 (511)
T PLN02192        166 NPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIL-SYNLGGMGCSAGLIS  244 (511)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCce-EEEcccchhhhHHHH
Confidence            2245666778999999999999999999999999999875533789999999999999986554 89998 799999999


Q ss_pred             HHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCC
Q 044410          178 IRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPD  257 (402)
Q Consensus       178 l~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~  257 (402)
                      |++|++++++++.++||||++|.+|..++..+  |++.....++|||||+|+||++.+. .. ..+.+++......+.+.
T Consensus       245 LdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~--drs~lv~n~LFgDGAaAvLLs~~~~-~~-~~~k~~L~~~vrt~~~~  320 (511)
T PLN02192        245 IDLAKHLLQVHPNSYALVISMENITLNWYFGN--DRSMLVSNCLFRMGGAAILLSNKRS-DR-RRSKYQLVHTVRTHKGA  320 (511)
T ss_pred             HHHHHHHHHcCCCCeEEEEEEEeccccCCCCC--CHHHHhccccccccceEEEEecccc-cc-ccccceeeeeEEEEecC
Confidence            99999999999999999999999996553212  3444445589999999999998643 11 11234555444444554


Q ss_pred             Cccccccee----ecCceEEEeCCchhHHHHHhHHHHHHHh--------------hccCC-------CC--C---Ccce-
Q 044410          258 TENYISGQL----KEMGTYCHLSRDVPVAIGNYVDKCLSNA--------------MSPIG-------IS--D---WNSL-  306 (402)
Q Consensus       258 ~~~~~~~~~----~~~g~~~~~~~~v~~~~~~~~~~~i~~~--------------L~~~g-------l~--~---~~di-  306 (402)
                      +++.+.+..    ...+..+.++++++..+...++..++.+              +.-.|       +.  +   ..+| 
T Consensus       321 dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Id  400 (511)
T PLN02192        321 DDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFE  400 (511)
T ss_pred             ChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhc
Confidence            444333221    1233466777777776655544333221              00001       11  0   0357 


Q ss_pred             EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEccccc
Q 044410          307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLT  386 (402)
Q Consensus       307 ~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~  386 (402)
                      +|++||+|+++++.+++.||+++++...++.++++||||+|+|+++.|+++.++    |++++|   |+|++++||+|++
T Consensus       401 hf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eak----grik~G---DrVl~iaFGsGf~  473 (511)
T PLN02192        401 HFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKKG---DRTWQIAFGSGFK  473 (511)
T ss_pred             eEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEcchHh
Confidence            999999999999999999999985555555679999999999999999999987    999999   9999999999999


Q ss_pred             ceeeEEeeecc
Q 044410          387 VETVVLQSVST  397 (402)
Q Consensus       387 ~~~~ll~~~~~  397 (402)
                      |++++|||...
T Consensus       474 ~~sav~~~~~~  484 (511)
T PLN02192        474 CNSAVWKALRT  484 (511)
T ss_pred             hhhhheeeecc
Confidence            99999999654

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=100.00  E-value=2.3e-46  Score=370.35  Aligned_cols=342  Identities=19%  Similarity=0.273  Sum_probs=254.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhc---CCCChhHHH---------HHHHHHHHHcCcceeecccchhHhhhCCCCc
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVT---NSDHKTELK---------EKFKRICERQSIKKRYFHLTEEILKENPNMC   91 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~---~~~~~~~~~---------~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~   91 (402)
                      ++|.|+|+|+|+++++|+|+++.+....   ..++..++.         ...+||++++||++||++.+.+.+..     
T Consensus         3 ~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~-----   77 (372)
T PRK07515          3 VVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDP-----   77 (372)
T ss_pred             cEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcc-----
Confidence            6899999999999999999988753110   000000000         12578999999999999864211100     


Q ss_pred             cCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccc
Q 044410           92 CYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQG  170 (402)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~  170 (402)
                      ....+.+++|...+.....+|+.+|+++||+++|++++|||.||++++++ +..|+.+..|++.||++. +  +++++++
T Consensus        78 ~~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~-~--~~~v~~a  154 (372)
T PRK07515         78 DRMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEG-F--AFDMNVA  154 (372)
T ss_pred             cccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCC-c--EEEecch
Confidence            11234445555444456789999999999999999999999999998887 788999999999999973 3  7899999


Q ss_pred             cchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEee
Q 044410          171 CYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSC  250 (402)
Q Consensus       171 C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~  250 (402)
                      |+|++.||.+|.++|++|..++||||++|+++..+ ++.+     +...++|||||+|+||++.+. .. ....+++.+.
T Consensus       155 Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-~~~d-----~~~~~lfGDgAaA~vL~~~~~-~~-~~~~~~il~~  226 (372)
T PRK07515        155 CSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL-NFRD-----RDSHFIFGDVATAVIVERADT-AT-SAGGFEILGT  226 (372)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc-cccC-----CCCCEEecCccEEEEEeeccc-cc-cCCCceEEEE
Confidence            99999999999999999999999999999998633 3332     224689999999999998654 21 0012233222


Q ss_pred             ee-----eecCCCccc-cc---ceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH
Q 044410          251 TQ-----TTVPDTENY-IS---GQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD  319 (402)
Q Consensus       251 ~~-----~~~p~~~~~-~~---~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~  319 (402)
                      ..     ..++...+. ..   .........+.+ ++.+++.+...++++|+++|+++|+++ +|| +|++||+|.++++
T Consensus       227 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~-~dId~~~~Hq~~~~~~d  305 (372)
T PRK07515        227 RLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTP-ADVKRFWLHQANINMNQ  305 (372)
T ss_pred             EeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHH
Confidence            11     111100000 00   001111123343 778899999999999999999999997 999 9999999999999


Q ss_pred             HHHHH-cCC--CccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          320 QVEKT-LGL--RKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       320 ~~~~~-lgi--~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .+.+. ||+  +.++.+.   ++++||||+|||+|++|+++.      +++++|   |+|++++||+|++|+++|||.
T Consensus       306 ~~~~~llg~~~~~~~~~~---~~~~~GNt~sasi~~~L~~~~------~~~~~G---d~vll~~~G~G~~~~~~ll~~  371 (372)
T PRK07515        306 LIGKKVLGRDATPEEAPV---ILDEYANTSSAGSIIAFHKHS------DDLAAG---DLGVICSFGAGYSIGSVIVRK  371 (372)
T ss_pred             HHHHHhccCCCChhhceE---eHHhcCCchhhHHHHHHHHHh------ccCCCC---CEEEEEEecccHHHHHHHhcc
Confidence            99988 564  5566655   499999999999999999874      447889   999999999999999999985

>PLN00415 3-ketoacyl-CoA synthase

Probab=100.00  E-value=1.8e-44  Score=355.37  Aligned_cols=347  Identities=20%  Similarity=0.324  Sum_probs=269.8

Q ss_pred             CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410           21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL   98 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~   98 (402)
                      +| +|++..++|.|+.  +++.+.+.+.......-+  ++..+...+|.+++||.+..+..+.- +...|      .|++
T Consensus        58 ~~-vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~s~~F~~~i~~rSGlg~et~~p~~~-~~~~~------~~~~  127 (466)
T PLN00415         58 KP-VYLVDFSCHQPTDSCKISSETFFNMAKGAQLYT--EETIQFMTRILNRSGLGDDTYSPRCM-LTSPP------TPSM  127 (466)
T ss_pred             Cc-EEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHHcCCCCCeeeCCcc-ccCCC------CCCh
Confidence            57 9999999999876  688888888764322211  34456678899999998876654322 11111      1222


Q ss_pred             HHHHHHHHhhHHHHHHH-HHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeecc-ccchHH
Q 044410           99 DARQAMLIDEVPKLGKE-AALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQ-GCYMGG  175 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~-Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~-~C~~~~  175 (402)
                      .+     .+...+|+.. |+++||+++|++|+|||+||+ ++++ +..|+++.+|+++||++++.. .+++++ ||+|++
T Consensus       128 ~~-----~~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v~-~~dL~gmGCsggv  200 (466)
T PLN00415        128 YE-----ARHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDVK-TYNLSGMGCSAGA  200 (466)
T ss_pred             hh-----hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCce-EEEeccccchHHH
Confidence            11     1235566665 778999999999999999985 5678 589999999999999996654 788885 999999


Q ss_pred             HHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeec
Q 044410          176 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTV  255 (402)
Q Consensus       176 ~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~  255 (402)
                      .||++|++++++++.++||||++|.+|..++++.+  +...+..++|||||+|+||++++. .. ..+.+++......+.
T Consensus       201 ~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~d--r~~lv~n~LFgDGAAAvlLs~~~~-~~-~~~~~~L~~~vrt~~  276 (466)
T PLN00415        201 ISVDLATNLLKANPNTYAVIVSTENMTLSMYRGND--RSMLVPNCLFRVGGAAVMLSNRSQ-DR-VRSKYELTHIVRTHK  276 (466)
T ss_pred             HHHHHHHHHHHhCCCCEEEEEEEecccccccCCCc--HhHhccceeecccceEEEEecCcc-cc-cCccceeeeEEEecC
Confidence            99999999999999999999999999976644433  455556789999999999998654 21 123565544434444


Q ss_pred             CCCccccc---ceeecCce-EEEeCCchhHHHHHhHHHHHHHhhccCC----------------------CCC----Cc-
Q 044410          256 PDTENYIS---GQLKEMGT-YCHLSRDVPVAIGNYVDKCLSNAMSPIG----------------------ISD----WN-  304 (402)
Q Consensus       256 p~~~~~~~---~~~~~~g~-~~~~~~~v~~~~~~~~~~~i~~~L~~~g----------------------l~~----~~-  304 (402)
                      |.+++.+.   |..+++|+ .+.++++++..+.+.+...+..+ ....                      +++    ++ 
T Consensus       277 ~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l-~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~~  355 (466)
T PLN00415        277 GSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTAL-GPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKL  355 (466)
T ss_pred             CCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHh-hhhccchHHHHHHHHHHHhhhhhhccCCCCCCCccc
Confidence            77776666   66777787 88899999999888877666553 2222                      221    12 


Q ss_pred             ce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcc
Q 044410          305 SL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP  383 (402)
Q Consensus       305 di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~  383 (402)
                      .+ +|++|++++++++.+++.||++++++..+|+++++||||+|+|+++.|++..++    ++.++|   |++++++||+
T Consensus       356 ~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~----~~~~~G---drvl~iaFGp  428 (466)
T PLN00415        356 CFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAK----CRVKRG---DRVWQLAFGS  428 (466)
T ss_pred             cceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhh----ccCCCC---CEEEEEEEcC
Confidence            15 899999999999999999999999999999999999999999999999999877    888999   9999999999


Q ss_pred             cccceeeEEeeec
Q 044410          384 GLTVETVVLQSVS  396 (402)
Q Consensus       384 G~~~~~~ll~~~~  396 (402)
                      |+++.++|||+..
T Consensus       429 Gf~~es~v~~~~~  441 (466)
T PLN00415        429 GFKCNSIVWRALR  441 (466)
T ss_pred             cchhhHhHHHHhc
Confidence            9999999999865

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=100.00  E-value=3.4e-43  Score=341.58  Aligned_cols=307  Identities=27%  Similarity=0.353  Sum_probs=248.3

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++++.+.    .          .++...+||++|++..+++                     
T Consensus         2 v~I~~i~~~lP~~~v~~~~~~~~~~----~----------~~~~~~~gi~~r~~~~~~~---------------------   46 (324)
T cd00827           2 VGIEAIGAYLPRYRVDNEELAEGLG----V----------DPGKYTTGIGQRHMAGDDE---------------------   46 (324)
T ss_pred             ccEEEEEecCCceeecHHHHHHHhC----C----------CcceeeeecceeEecCCCC---------------------
Confidence            6899999999999999999988642    1          2677889999999987644                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|++++|+++|++++|||.||++++++ ...|+.+.+|+..||++..+  .++++++|+|++.||.+|.
T Consensus        47 ----~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~--~~~v~~~C~s~~~al~~A~  120 (324)
T cd00827          47 ----DVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAE--AFDLKQACYGGTAALQLAA  120 (324)
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCc--eeehhhhhHHHHHHHHHHH
Confidence                3899999999999999999999999999999888 56889999999999998544  7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCc---
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE---  259 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~---  259 (402)
                      ++|++|..++|||+++|.++.... ..      ....++|||||+|+||++.+. ..    ...+........+...   
T Consensus       121 ~~i~~g~~~~vlvv~~e~~~~~~~-~~------~~~~~~~gdgaaA~ll~~~~~-~~----~~~i~~~~~~~~~~~~~~~  188 (324)
T cd00827         121 NLVESGPWRYALVVASDIASYLLD-EG------SALEPTLGDGAAAMLVSRNPG-IL----AAGIVSTHSTSDPGYDFSP  188 (324)
T ss_pred             HHHHcCCCCEEEEEEEHHhhhccc-CC------CCccccccCceEEEEEecCcc-cc----cCCceeeeeecccccccCc
Confidence            999999999999999999986331 11      124689999999999998765 10    1122211111122111   


Q ss_pred             -ccccceee-----cCceEEEeC---CchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCH-HHHHHHHHHcCCC
Q 044410          260 -NYISGQLK-----EMGTYCHLS---RDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGD-GLLDQVEKTLGLR  328 (402)
Q Consensus       260 -~~~~~~~~-----~~g~~~~~~---~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~-~~~~~~~~~lgi~  328 (402)
                       ..+.....     .....+.+.   ++++..+...++++++++|++.|++  ++| +|++||+|. .+++.++++|+++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~~~h~~~~~~~~~~~~~~l~~~  266 (324)
T cd00827         189 YPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS--EDIDYFVPHQPNGKKILEAVAKKLGGP  266 (324)
T ss_pred             cceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc--cccceeeccCchHHHHHHHHHHHccch
Confidence             01111000     011234443   4788888999999999999999988  678 999999999 9999999999999


Q ss_pred             ccccHHHHH-HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410          329 KEKLWASRY-VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       329 ~ek~~~~~~-~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll  392 (402)
                      ++++..++. ++++|||+++||+|++|++++++    +++++|   |+|+++++|+|++|+++++
T Consensus       267 ~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~----~~~~~G---d~vl~~~~G~G~~~~~~~~  324 (324)
T cd00827         267 PEKASQTRWILLRRVGNMYAASILLGLASLLES----GKLKAG---DRVLLFSYGSGFTAEAFVL  324 (324)
T ss_pred             HhhhccchhhHHHHhCchHHHHHHHHHHHHHhc----CCCCCC---CEEEEEEeccchhheeccC
Confidence            888886543 69999999999999999999998    889999   9999999999999998764

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=100.00  E-value=2.3e-40  Score=327.40  Aligned_cols=304  Identities=22%  Similarity=0.199  Sum_probs=237.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++++++++..+   ..         .+|+...+|+++|++..++|                     
T Consensus         1 iGI~~i~~y~P~~~v~~~ela~~~g---~~---------~~~~~~g~G~~~~~~~~~~e---------------------   47 (379)
T TIGR01835         1 IGIDKISFFTPQNYLDMTALAEARG---VD---------PEKFHIGIGQKKMAVPPIDE---------------------   47 (379)
T ss_pred             CCEeEEEEECCCEEeeHHHHHHHhC---CC---------HHHHHhhcCceEEeeCCCCC---------------------
Confidence            4799999999999999999998642   11         36888999999999987766                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+++|+++||+++  ++++||+|+++|+++ +..|+.+..|++.||+++.+. ++++.++|+|++.||++|.
T Consensus        48 ----d~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~-~~dv~~aC~gg~~aL~~A~  120 (379)
T TIGR01835        48 ----DIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCR-SFELKQACYGATAALQMAK  120 (379)
T ss_pred             ----CHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCce-EEEeccccHHHHHHHHHHH
Confidence                37999999999999998  899999999999999 778999999999999986543 8899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI  262 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  262 (402)
                      ++|++|+.++||||++|.....   +.+      ....+|||||+|+||++++.       .+.+...... .  +++.+
T Consensus       121 ~~i~s~~~~~aLVv~~D~a~~~---~~~------~~~~~~GdGA~A~Ll~~~~~-------i~~~~~~~~~-~--t~~~~  181 (379)
T TIGR01835       121 GHVALSPDRKVLVIASDIAKYG---LES------PGEPTQGAGAVAMLVSADPK-------LLAINEDSVL-Y--TDDIM  181 (379)
T ss_pred             HHHHcCCCCeEEEEEeehhhcc---cCC------CCCccccCccEEEEEecCCC-------eeEEecccee-e--ecCCC
Confidence            9999999999999999996531   111      12468999999999998654       1222110000 0  11111


Q ss_pred             cceeecCce--EEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHH----HHHHHHHcCCCc-cccH-
Q 044410          263 SGQLKEMGT--YCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGL----LDQVEKTLGLRK-EKLW-  333 (402)
Q Consensus       263 ~~~~~~~g~--~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~----~~~~~~~lgi~~-ek~~-  333 (402)
                      ++. ++.+.  ....++.....+.+.++++++++|+++|+++ +|+ +|++||++.++    ++.+.+.++++. +++. 
T Consensus       182 df~-~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~-~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~  259 (379)
T TIGR01835       182 DFW-RPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSL-ADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQN  259 (379)
T ss_pred             Ccc-CCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCH-HHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHH
Confidence            111 11111  1223566677788899999999999999997 999 99999998777    344666777773 3333 


Q ss_pred             ---HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhh-cccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          334 ---ASRYVLREYGNMGAPSVFFILDEVRKKSIEEM-KATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       334 ---~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g-~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                         .++.+.+++|||++||+|++|..+++.    + ++++|   |+|+|+++|+|++.....++..
T Consensus       260 ~~~~s~~~~~~~GN~~sas~~l~L~~~l~~----~~~~~~G---d~ill~s~GsG~~ae~~~~~~~  318 (379)
T TIGR01835       260 AYLESIIYNREVGNLYTGSLYLGLASLLEN----AFEDTTG---DKIGLFSYGSGAVAEFFSGTLV  318 (379)
T ss_pred             HhhhhhhhhhhcCchHhHHHHHHHHHHHHh----cccCCCC---CEEEEEEecCCcceeeEEEEEc
Confidence               233468999999999999999999986    5 68899   9999999999999887777653

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=100.00  E-value=6.2e-39  Score=289.72  Aligned_cols=222  Identities=45%  Similarity=0.748  Sum_probs=190.7

Q ss_pred             cccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCcc
Q 044410           13 MTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCC   92 (402)
Q Consensus        13 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~   92 (402)
                      |.+.++.+++ .+|.|||+.+|+++++|+++.+.+.+....++..+.+++..++++++||++||+..|.+.+..+|.+..
T Consensus         5 ~~~~~~~~g~-A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~   83 (226)
T PF00195_consen    5 MRRAQRSPGP-AYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWD   83 (226)
T ss_dssp             HHHHHS-SSS-EEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHS
T ss_pred             HhhcccCCCC-eEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhh
Confidence            5556677788 999999999999999999999987665555554566778889999999999999999888888888877


Q ss_pred             CCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccc
Q 044410           93 YEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCY  172 (402)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~  172 (402)
                      ...|++++|++.|.+.+.+|+.+|+++||+++|++++|||+||++|||++..|++..+|.++|||++.+.|.....+||+
T Consensus        84 ~~~ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~  163 (226)
T PF00195_consen   84 FADPSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCA  163 (226)
T ss_dssp             SSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGG
T ss_pred             ccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchh
Confidence            88999999999999999999999999999999999999999999999999999999999999999999998999999999


Q ss_pred             hHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCC
Q 044410          173 MGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       173 ~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                      +++.+|+.|..+.++++..+||||++|.+|.+|+.|.+.++++.+...+|||||+|+||+.+|
T Consensus       164 gg~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP  226 (226)
T PF00195_consen  164 GGAAGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP  226 (226)
T ss_dssp             HHHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred             hHHHHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence            999999999999999999999999999999888756566688899999999999999999875

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=100.00  E-value=1.3e-36  Score=302.77  Aligned_cols=303  Identities=17%  Similarity=0.191  Sum_probs=232.1

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeeccc--chhHhhhCCCCccCCCCChHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL--TEEILKENPNMCCYEAPSLDAR  101 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~--~~~~~~~~~~~~~~~~~~~~~~  101 (402)
                      ++|.++|.|+|+++++|+++++.++   .+         .+|+  .+||.+|+++.  ++|                   
T Consensus         5 vgI~gig~Y~P~~~v~n~eLa~~~g---~~---------~~~~--~~GI~~r~~ava~~~E-------------------   51 (459)
T PLN02577          5 VGILAMEVYFPPTCVQQEALEAHDG---VS---------KGKY--TIGLGQDCMAFCTDVE-------------------   51 (459)
T ss_pred             cEEEEEEEeCCCeEEcHHHHHHHhC---CC---------HHHH--hhccceeEeccCCCCC-------------------
Confidence            8999999999999999999988752   22         2565  68999999754  444                   


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHH---HHcCCCCccccceeeccccchHHHH
Q 044410          102 QAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLM---RLLGLKPSVNRLMIYTQGCYMGGTV  177 (402)
Q Consensus       102 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~---~~LGl~~~~~~~~~i~~~C~~~~~a  177 (402)
                            ++.+||++|++++|+++|+++++||+||++|.++ +..|+++..|+   +.||.+...  ++|++.+|.|++.|
T Consensus        52 ------d~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~~~~--afDi~~AC~G~~~A  123 (459)
T PLN02577         52 ------DVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDIE--GVDSTNACYGGTAA  123 (459)
T ss_pred             ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCCCcE--EeehhhhhHHHHHH
Confidence                  4899999999999999999999999999999999 88999998885   677877653  89999999999999


Q ss_pred             HHHHHHHHHcCC--CCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEE--Eeeeee
Q 044410          178 IRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQI--LSCTQT  253 (402)
Q Consensus       178 l~~A~~~i~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~--~~~~~~  253 (402)
                      |.+|.++|++|.  .++||||++|..+... +|.         ..++||||+|+||+.++. .     .+..  .+.++ 
T Consensus       124 L~~A~~~i~sg~~~~~~aLVV~aD~a~~~~-~~~---------e~t~GdGA~A~lv~~~~~-~-----~l~~~~~g~~~-  186 (459)
T PLN02577        124 LLNCVNWVESSSWDGRYGLVVAADSAVYAE-GPA---------RPTGGAGAVAMLVGPNAP-I-----VFESKYRGSHM-  186 (459)
T ss_pred             HHHHHHHHHcCCCCCCeEEEEEechhhccC-CCC---------CCCCCcceEEEEEccCCC-c-----eeecccccccC-
Confidence            999999999986  5999999999988532 232         245699999999997543 1     1111  11111 


Q ss_pred             ecCCCccccc-ceeecC-ceEEEeCCchhHHHHHhHHHHHHHhhccC------CCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410          254 TVPDTENYIS-GQLKEM-GTYCHLSRDVPVAIGNYVDKCLSNAMSPI------GISDWNSL-FYVVHPGGDGLLDQVEKT  324 (402)
Q Consensus       254 ~~p~~~~~~~-~~~~~~-g~~~~~~~~v~~~~~~~~~~~i~~~L~~~------gl~~~~di-~~i~H~~~~~~~~~~~~~  324 (402)
                           .+.++ |..... .+.+.-|+.++.++.+.++.++++++++.      |++. +|+ ++++||+..+|..+..++
T Consensus       187 -----~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~-~d~d~~vfHqP~~km~~ka~~~  260 (459)
T PLN02577        187 -----AHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSI-SDADYFVFHAPYNKLVQKSFAR  260 (459)
T ss_pred             -----cccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCH-HHcCEEEecCCccchhHHHHHH
Confidence                 11111 111111 11233388999999999999999998877      7886 999 999999998887776655


Q ss_pred             cCCC----------------------------------------------ccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410          325 LGLR----------------------------------------------KEKLWASRYVLREYGNMGAPSVFFILDEVR  358 (402)
Q Consensus       325 lgi~----------------------------------------------~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~  358 (402)
                      |.+.                                              .+|+..+...-+++||++++|+++.|..++
T Consensus       261 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~SlL  340 (459)
T PLN02577        261 LVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASLV  340 (459)
T ss_pred             HhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHHHH
Confidence            5411                                              022333333567899999999999999999


Q ss_pred             HhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          359 KKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       359 ~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      +..   ....+|   ++|+++|+|+|......-+++.+
T Consensus       341 ~~~---~~~~~G---~rIg~fSYGSG~~se~fs~~v~~  372 (459)
T PLN02577        341 HNK---HSELAG---KRILMFSYGSGLTATMFSLRLHE  372 (459)
T ss_pred             hhc---cccCCC---CEEEEEeecCCccceeEEEEEeC
Confidence            751   113378   99999999999998888777654

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=100.00  E-value=6.3e-35  Score=277.97  Aligned_cols=305  Identities=20%  Similarity=0.226  Sum_probs=245.2

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|.|+|.++++.+|+++..+    -        ..+++.+.+|+++|.++..+|.                    
T Consensus         3 iGI~~~g~y~p~~~i~~~ela~~~g----~--------d~~k~~~gl~~~e~sv~~~~ED--------------------   50 (377)
T COG3425           3 IGIVGIGAYIPRYRIKLEELARAWG----V--------DPEKIKKGLGVEEKSVPPWDED--------------------   50 (377)
T ss_pred             cccceEEEeccceEeeHHHHHhhcC----C--------ChHHhhhccccccccCCCCchh--------------------
Confidence            7899999999999999999988632    1        1367888999999999988773                    


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                           +..||++|++++|+++++|+++|+.|+++|.++ +...+.+..|++.||+++... ++++..+|-++..||+.|.
T Consensus        51 -----~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~-~~d~~~AC~agT~aL~~a~  124 (377)
T COG3425          51 -----AVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSAR-AADVEFACYAGTAALQAAI  124 (377)
T ss_pred             -----HHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCcee-hhhHHHHHHHHHHHHHHHH
Confidence                 999999999999999999999999999999998 888999999999999998864 9999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee--cCCCcc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT--VPDTEN  260 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~  260 (402)
                      .++.+|+.+++|||++|+....   |.+      ....+.|+||+|+||++++. .     ...+...++.+  .|+.  
T Consensus       125 ~~v~s~~~~~~LvI~sD~a~~~---~~~------~~E~t~GAGavA~lIg~n~~-~-----~a~~~~~~syt~d~~DF--  187 (377)
T COG3425         125 GWVESGMISYGLVIGADTAQYA---PGD------ALEYTAGAGAVAFLIGKNPP-I-----VAEFEGTGSYTTDTPDF--  187 (377)
T ss_pred             HHHHcCCccceEEEeehhhccC---CCc------ccCccCCCceEEEEEccCCC-e-----EEEecCceEEecCCCcc--
Confidence            9999999999999999998642   221      13467999999999999744 1     12222222221  1111  


Q ss_pred             cccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHH
Q 044410          261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVL  339 (402)
Q Consensus       261 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l  339 (402)
                         |+....-+-..-++..-..+.+++..++++++++.|+++ +|+ ++++|+++.++....++.++...+++..+....
T Consensus       188 ---wRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~-~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~  263 (377)
T COG3425         188 ---WRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSP-DDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYP  263 (377)
T ss_pred             ---cccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCCh-hhhCeEEecCCCCchHHHHHHHhCccHhhcCccchhh
Confidence               211100000111222234567888999999999999997 999 999999999999999999999988888775445


Q ss_pred             HhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          340 REYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       340 ~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      ++.||++++|+++.|..+++.    .+ .+|   |+|++++||+|......-++..
T Consensus       264 ~~vGN~YtgS~~L~Las~L~~----a~-~~G---~rIl~~SYGSGa~s~~fs~~v~  311 (377)
T COG3425         264 QRIGNTYTGSLLLGLASLLDN----AK-LPG---DRILLFSYGSGAGSEAFSITVT  311 (377)
T ss_pred             hhcCcccchhHHHHHHHHHhh----cC-CCC---CEEEEEeeCCCcceeEEEEEec
Confidence            689999999999999999997    33 588   9999999999987666555543

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=100.00  E-value=1.6e-32  Score=273.12  Aligned_cols=310  Identities=20%  Similarity=0.178  Sum_probs=210.9

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeec--ccchhHhhhCCCCccCCCCChHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYF--HLTEEILKENPNMCCYEAPSLDAR  101 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~~~~~~~~~~~~~~~~~~~~~  101 (402)
                      ++|.++|.|+|+++++|+++++..+   . +        ..|+  .+||.+|++  +.++|                   
T Consensus         2 vgI~~ig~y~P~~~v~~~eLa~~~g---~-~--------~~k~--~~GI~~rr~av~~~~E-------------------   48 (454)
T TIGR01833         2 VGILALEIYFPSQYVDQAELEKYDG---V-S--------AGKY--TIGLGQTKMGFCTDRE-------------------   48 (454)
T ss_pred             cEEEEEEEeCCCeEEcHHHHHHhcC---C-C--------HHHh--eechhheecccCCCCC-------------------
Confidence            6899999999999999999987642   1 1        2455  599999994  55555                   


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHc---CCCCccccceeeccccchHHHH
Q 044410          102 QAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLL---GLKPSVNRLMIYTQGCYMGGTV  177 (402)
Q Consensus       102 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~L---Gl~~~~~~~~~i~~~C~~~~~a  177 (402)
                            +..+|+..|++++|+++++++++||+||++|.++ +..|+.+..|++.|   |.+...  ++++.++|+|++.|
T Consensus        49 ------d~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~--~fDi~~AC~G~t~A  120 (454)
T TIGR01833        49 ------DINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVE--GIDTTNACYGGTAA  120 (454)
T ss_pred             ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCce--EEeccccchhHHHH
Confidence                  4899999999999999999999999999999999 89999999999855   455443  89999999999999


Q ss_pred             HHHHHHHHHcCC--CCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCC--CceEEEeeeee
Q 044410          178 IRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHES--PLFQILSCTQT  253 (402)
Q Consensus       178 l~~A~~~i~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~--~~~~~~~~~~~  253 (402)
                      |.+|.++|+++.  .++||||++|+.-.  . +.       ....++||||+|+||++++. ..+..  ....+....-.
T Consensus       121 L~~A~~~i~s~~~~~~~aLVV~sDia~y--~-~~-------~~~~t~GaGAvAmLv~~~~~-~~~~~~~~~~~~~~~~DF  189 (454)
T TIGR01833       121 LFNAINWIESSSWDGRYALVVAGDIAVY--A-KG-------NARPTGGAGAVAMLIGPNAP-IVFERGLRGSHMQHAYDF  189 (454)
T ss_pred             HHHHHHHHHcCCcCCCeEEEEEeccccc--c-CC-------CeeeccccceEEEEeccCcc-ceecCccceEEEeecccc
Confidence            999999999985  59999999999442  1 11       12457899999999998765 21111  01111110001


Q ss_pred             ecCCCcccccceeecCceEEEeCCchh--------HHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHH-
Q 044410          254 TVPDTENYISGQLKEMGTYCHLSRDVP--------VAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEK-  323 (402)
Q Consensus       254 ~~p~~~~~~~~~~~~~g~~~~~~~~v~--------~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~-  323 (402)
                      .-|......   ..-+|   .++-+.+        ....+.+..+++.+..+.++.+ +|+ +++||++..+|..+... 
T Consensus       190 ~rP~~~~~~---p~vdg---~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~-~dfd~~~fH~P~~km~~ka~~~  262 (454)
T TIGR01833       190 YKPDLASEY---PVVDG---KLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL-NDFDYMVFHSPYCKLVQKSLAR  262 (454)
T ss_pred             cCCCCCCcc---cccCC---ccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH-hHcCEEeccCCcccHHHHHHHH
Confidence            112211100   00011   0111111        1111112222222333345775 888 99999998887665422 


Q ss_pred             Hc----C-----------------------------------------CCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410          324 TL----G-----------------------------------------LRKEKLWASRYVLREYGNMGAPSVFFILDEVR  358 (402)
Q Consensus       324 ~l----g-----------------------------------------i~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~  358 (402)
                      .|    .                                         ...+|+..+...-++.||++++|+++.|..++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L~Sll  342 (454)
T TIGR01833       263 LLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCLASLL  342 (454)
T ss_pred             HHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHHHHHH
Confidence            22    1                                         01133333322345899999999999999999


Q ss_pred             HhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410          359 KKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       359 ~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                      +...  .....|   ++|+|+++|+|.......+++.+.
T Consensus       343 ~~~~--~~~~~g---~ri~~fSYGSG~~se~fs~~v~~~  376 (454)
T TIGR01833       343 SSKS--AQELAG---KRVGMFSYGSGLAASMFSLRVSQD  376 (454)
T ss_pred             hhCC--ccccCC---CEEEEEeccCCcceeeEEEEEeCC
Confidence            7511  113468   999999999999988888887654

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.97  E-value=9.3e-30  Score=238.56  Aligned_cols=236  Identities=28%  Similarity=0.343  Sum_probs=189.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      ..+|+.+|++++|+++|++++|||.|+++++++ +..|+.+.+|+..+|+++.+  .+++..+|++++.||++|..+|++
T Consensus         7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~--~~~i~~~C~s~~~al~~A~~~i~~   84 (254)
T cd00327           7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP--AYSVNQACATGLTALALAVQQVQN   84 (254)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCC--cceeccHhHHHHHHHHHHHHHHHC
Confidence            789999999999999999999999999999998 66899999999999996333  789999999999999999999999


Q ss_pred             CCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCccccccee
Q 044410          188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQL  266 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~  266 (402)
                      |..+++||+++|.                   ++|||||+|+||++.+.... ...+..++.+......+...       
T Consensus        85 g~~~~~lv~~~e~-------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~-------  138 (254)
T cd00327          85 GKADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM-------  138 (254)
T ss_pred             CCCCEEEEEecce-------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC-------
Confidence            9999999999988                   36899999999998653110 01122344432221111100       


Q ss_pred             ecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH--HHHHHHHhcC
Q 044410          267 KEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW--ASRYVLREYG  343 (402)
Q Consensus       267 ~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~--~~~~~l~~~G  343 (402)
                                  .+....+.+.++++++|+++|+++ +|+ +|++|+.+..+++.+++.++++.++..  ....+..+||
T Consensus       139 ------------~~~~~~~~~~~~i~~~l~~ag~~~-~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  205 (254)
T cd00327         139 ------------VPAVSGEGLARAARKALEGAGLTP-SDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTG  205 (254)
T ss_pred             ------------CCCCChHHHHHHHHHHHHHcCCCH-HHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccc
Confidence                        011124456788999999999997 999 999999999999999999998877762  0012588999


Q ss_pred             CCCcchHHHHHHHHHHhhhhhhccc-------CCCCCceEEEEEEcccccceeeEE
Q 044410          344 NMGAPSVFFILDEVRKKSIEEMKAT-------TGEGLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       344 n~~sasi~i~L~~~~~~~~~~g~i~-------~G~~~d~vll~~~G~G~~~~~~ll  392 (402)
                      |+++||.++.|.++++.    .+.+       +|   ++++++++|.|++++++++
T Consensus       206 ~~~~as~~~~l~~~~~~----~~~~~~~~~~~~~---~~~l~~~~g~Gg~~~~~~l  254 (254)
T cd00327         206 HPLGAAGLAILDELLLM----LEHEFIPPTPREP---RTVLLLGFGLGGTNAAVVL  254 (254)
T ss_pred             cchHHHHHHHHHHHHHH----HhCCCcCCCCCCc---CEEEEeeEcCCCcceEEEC
Confidence            99999999999999886    4444       56   9999999999999999875

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=99.95  E-value=8e-28  Score=234.33  Aligned_cols=254  Identities=23%  Similarity=0.226  Sum_probs=189.9

Q ss_pred             HHHHHHHHHHHHHHHcCCC----CCCccEEEEEecCC-CC---------------------CCCHHHHHHHHcCCCCccc
Q 044410          109 VPKLGKEAALKAIKEWGQP----VSKITHLIFSAFYG-VD---------------------MPGADVRLMRLLGLKPSVN  162 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~----~~dId~li~~s~~~-~~---------------------~p~~a~~i~~~LGl~~~~~  162 (402)
                      ..+|+.+|+++||+++|++    +++||.||++++++ +.                     .|+.+.+|+..||++. + 
T Consensus        11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g-~-   88 (332)
T cd00825          11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHG-P-   88 (332)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCC-C-
Confidence            6789999999999999999    99999999988876 43                     6788999999999954 3 


Q ss_pred             cceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCC----------CCc--cchhhhhhhhhhccCcEEEE
Q 044410          163 RLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHE----------PSE--THLDVLVVQAVFGDGAGAAI  230 (402)
Q Consensus       163 ~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~----------~~~--~~~~~~~~~~lfGDGAaA~v  230 (402)
                       .+++..+|++++.||++|.++|++|..+++||+++|..+..+..          |+.  ...++....++|||||+|+|
T Consensus        89 -~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v  167 (332)
T cd00825          89 -AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV  167 (332)
T ss_pred             -ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence             67889999999999999999999999999999999987642211          000  00011235779999999999


Q ss_pred             EccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EE
Q 044410          231 IGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FY  308 (402)
Q Consensus       231 L~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~  308 (402)
                      |++.+... ........+.+.+....+...                  ..+....+.+.++++++|+++|+++ +|| ++
T Consensus       168 L~~~~~a~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~~~~~i~~al~~agl~~-~did~~  228 (332)
T cd00825         168 VEELEHALARGAHIYAEIVGTAATIDGAGM------------------GAFAPSAEGLARAAKEALAVAGLTV-WDIDYL  228 (332)
T ss_pred             ECcHHHHHHCCCeEEEEEEEEEEccCCCCC------------------CCCCcCHHHHHHHHHHHHHHcCCCH-hHCCEE
Confidence            99755311 001112344433222111110                  0011123456788999999999997 999 99


Q ss_pred             EEcCCCHHHHHHHHHHcCCCcccc---HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc-----------------
Q 044410          309 VVHPGGDGLLDQVEKTLGLRKEKL---WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT-----------------  368 (402)
Q Consensus       309 i~H~~~~~~~~~~~~~lgi~~ek~---~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~-----------------  368 (402)
                      ++|+.+..+.+.+++.++.+.++.   .. +.+..+|||+++|+.++.|..+++.    .+.+                 
T Consensus       229 ~~h~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~G~~~aas~~~~l~~~~~~----~~~~~~p~~~~~~~~~~~~~~  303 (332)
T cd00825         229 VAHGTGTPIGDVKELKLLRSEFGDKSPAV-SATKAMTGNLSSAAVVLAVDEAVLM----LEHGFIPPSIHIEELDEAGLN  303 (332)
T ss_pred             EccCCCCCCCCHHHHHHHHHHhCCCCcee-ECCCcccccchhHhHHHHHHHHHHH----HhcCccCCCCCCCCCCcccCc
Confidence            999999999999988887765541   11 1257899999999999999999875    3333                 


Q ss_pred             --------CCCCCceEEEEEEcccccceeeEE
Q 044410          369 --------TGEGLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       369 --------~G~~~d~vll~~~G~G~~~~~~ll  392 (402)
                              +|   ++++++++|.|.++++++|
T Consensus       304 ~~~~~~~~~~---~~~l~~~~G~Gg~~~~~vl  332 (332)
T cd00825         304 IVTETTPREL---RTALLNGFGLGGTNATLVL  332 (332)
T ss_pred             ccCCCCCCCC---CEEEEeeecCCCeeEEEeC
Confidence                    45   9999999999999999885

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=99.95  E-value=7.1e-26  Score=210.06  Aligned_cols=255  Identities=17%  Similarity=0.235  Sum_probs=197.9

Q ss_pred             CCcEEEEeeeeeCCCc--ccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCCh
Q 044410           21 GPTATILAIGTSTPPN--CFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSL   98 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~--~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~   98 (402)
                      +| +|++..++|.|+.  +++.+.+.+.+.....-  .++..+...+|.+++||.++.+..+ ....          ...
T Consensus         7 r~-VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f--~~~sl~F~~kIlerSGlG~eTy~P~-~~~~----------~p~   72 (290)
T PF08392_consen    7 RP-VYLVDFACYKPPDELRVSREEFIEHARRCGRF--DEESLDFQRKILERSGLGDETYLPP-ALHE----------IPP   72 (290)
T ss_pred             CC-EEEEeeeecCCCcccccCHHHHHHHHHhcccC--ChhHHHHHHHHHHhcCCCccccCCc-cccc----------CCC
Confidence            57 9999999999876  58889988876532221  1344567788999999999999743 3211          112


Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-eccccchHHHH
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI-YTQGCYMGGTV  177 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~-i~~~C~~~~~a  177 (402)
                      +..+....+.+..++..|++++|+++|++|+|||.||+.++++...|+++.+|.+++|++.+.. .++ .++||++++.+
T Consensus        73 ~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~-~~nLsGMGCsAglia  151 (290)
T PF08392_consen   73 DPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK-SYNLSGMGCSAGLIA  151 (290)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee-eecccCCcchhhHHH
Confidence            3456666777888999999999999999999999999999888999999999999999999876 555 57799999999


Q ss_pred             HHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCC
Q 044410          178 IRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPD  257 (402)
Q Consensus       178 l~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~  257 (402)
                      |++|+++++..+..++|||++|.++..++.  .++++...+.++|+|||+|+||++.+. .. ....+++.....++...
T Consensus       152 i~lA~~lL~~~p~~~ALVVstE~~s~~~Y~--G~~rsmlv~NcLFr~GgAAvLLSn~~~-~~-~~aky~L~~~vRt~~g~  227 (290)
T PF08392_consen  152 IDLAKDLLQAHPNSYALVVSTENISANWYR--GNDRSMLVSNCLFRMGGAAVLLSNKPS-DR-RRAKYELLHTVRTHTGA  227 (290)
T ss_pred             HHHHHHHHHhCCCcEEEEEEEeeccccccc--CCcHHHhhccccccCCceeEEeecCcc-cc-ccchhhhhheeeeecCC
Confidence            999999999999999999999999976643  345777889999999999999999876 22 23457776655555555


Q ss_pred             Ccccccce---eecCc-eEEEeCCchhHHHHHhHHHHHHHh
Q 044410          258 TENYISGQ---LKEMG-TYCHLSRDVPVAIGNYVDKCLSNA  294 (402)
Q Consensus       258 ~~~~~~~~---~~~~g-~~~~~~~~v~~~~~~~~~~~i~~~  294 (402)
                      .++.+..-   .+++| ..+.+++++...+.+.+..-|..+
T Consensus       228 ~d~ay~~v~q~eD~~g~~Gv~lsk~l~~vag~al~~ni~~l  268 (290)
T PF08392_consen  228 DDDAYRCVFQEEDEEGIVGVSLSKDLMKVAGKALKANITTL  268 (290)
T ss_pred             CCCceeeEEEeEcCCCceEEEEecchHHHHHHHHHHHHHHh
Confidence            55555422   22344 357789999998887776655543

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=99.94  E-value=2.2e-25  Score=190.80  Aligned_cols=149  Identities=43%  Similarity=0.741  Sum_probs=127.1

Q ss_pred             EEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410          246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKT  324 (402)
Q Consensus       246 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~  324 (402)
                      ++++..+.++|++++.+.|++.+.|+.+.++++++..+.++++.+++++|++.|++. .++ +|++|+++++|++.+++.
T Consensus         1 el~~~~~~~iP~te~~m~~~i~~~Gf~~~Ls~~vP~~i~~~i~~~~~~~L~~~g~~~-~~~~~wavHPGG~~ILd~v~~~   79 (151)
T PF02797_consen    1 ELVSTSSHLIPDTEDAMGWDIGDTGFHFILSKEVPDLISDNIPPFVEDLLARHGLSD-WDILFWAVHPGGRKILDAVEEA   79 (151)
T ss_dssp             EEEEEEEEE-TT-TTSEEEEEETTEEEEEE-TTHHHHHHHHHHHHHHHHHHGGTCCS-GGGSEEEEE-SSHHHHHHHHHH
T ss_pred             CceeccceEecCCcCceEEEEeCCeEEEEEhhHhHHHHHHHHHHHHHHHHhhhcccc-cccceeeecCChHHHHHHHHHH
Confidence            466777889999999999999999999999999999999999999999999999986 555 999999999999999999


Q ss_pred             cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          325 LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       325 lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      |+++++++..||++|++||||+|+++++.|++++++...+|....|++++++++++||+|+|..++|||..
T Consensus        80 L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~  150 (151)
T PF02797_consen   80 LGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV  150 (151)
T ss_dssp             HTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred             cCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence            99999999999999999999999999999999988433335555544458999999999999999999964

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.87  E-value=5.2e-21  Score=187.37  Aligned_cols=280  Identities=14%  Similarity=0.074  Sum_probs=194.3

Q ss_pred             HHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcC-CCCCCccEEEEEec---
Q 044410           64 KRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWG-QPVSKITHLIFSAF---  139 (402)
Q Consensus        64 ~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag-~~~~dId~li~~s~---  139 (402)
                      +||..++|+.+|++.. .+                         ...+|+..|++++|++++ +++++||++|..+.   
T Consensus        46 ~~i~~~~~~~~~~~~~-~~-------------------------r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~   99 (348)
T PRK06147         46 EWLIGAPVPLPPPWRG-PE-------------------------RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEER   99 (348)
T ss_pred             CceEeecCcCCcccCc-hH-------------------------HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhc
Confidence            5788888998888853 33                         278999999999999999 79999999888654   


Q ss_pred             --CC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----cC---CC
Q 044410          140 --YG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----FH---EP  208 (402)
Q Consensus       140 --~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~~---~~  208 (402)
                        .+ ...+.++..++.+||+.... +.+++..+|++++.||..|..+|++|..+.+||+++|..+..     |.   .+
T Consensus       100 ~~~~~~~~~~~~~~~~~~lG~~~~~-~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l  178 (348)
T PRK06147        100 PGRPPDLEERLLRELEARLGLRLEP-GSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRL  178 (348)
T ss_pred             CCCCcchHHHHHHHHHHHhCCCCCC-CcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhcc
Confidence              12 34456788999999995432 268999999999999999999999999999999999987641     10   01


Q ss_pred             CccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHH
Q 044410          209 SETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVD  288 (402)
Q Consensus       209 ~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~  288 (402)
                      ...   +....++|||||+++||++.+. ..  ....+++..+....++.            .+...+.. +  ..+.+.
T Consensus       179 ~~~---~~~~G~v~GEGA~a~vLe~~~~-A~--~rga~i~a~g~~~~~~~------------~~~~~~~p-~--~g~gl~  237 (348)
T PRK06147        179 LTS---QNSNGFIPGEAAAAVLLGRPAG-GE--APGLPLLGLGLGREPAP------------VGESEDLP-L--RGDGLT  237 (348)
T ss_pred             CCC---CCCCceeeeceEEEEEEccHhh-hh--cCCCceEEEEEeecCCC------------cccCCCCC-C--ChHHHH
Confidence            000   1225789999999999998654 21  11223332111111110            00000000 0  134677


Q ss_pred             HHHHHhhccCCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhh
Q 044410          289 KCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSI  362 (402)
Q Consensus       289 ~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~  362 (402)
                      ++++++|+++|+++ ++| +++.|..+....+     .+.+.++-..+..+. +..-..+||+++|+-.+.+..++.. +
T Consensus       238 ~ai~~AL~~agl~~-~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~-~  314 (348)
T PRK06147        238 QAIRAALAEAGCGL-EDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAA-S  314 (348)
T ss_pred             HHHHHHHHHcCCCH-HHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHH-H
Confidence            89999999999997 999 9999987655433     234445543333322 1246789999999999988876643 1


Q ss_pred             hhhcccCCCCCceEEEEEEcccccceeeEEeeeccC
Q 044410          363 EEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTN  398 (402)
Q Consensus       363 ~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~  398 (402)
                      .+| .-+|   +++|+++..-...-++++|+..+.|
T Consensus       315 ~~g-~~~g---~~~L~~s~~d~g~r~a~~l~~~~~~  346 (348)
T PRK06147        315 RKG-YGPG---PNVLCHLSDDDGARAALVLEYRRGP  346 (348)
T ss_pred             HcC-cCCC---CcEEEEecCCCCceEEEEEeccccC
Confidence            114 4457   7999999998888899999988876

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=99.86  E-value=9.2e-22  Score=154.92  Aligned_cols=89  Identities=28%  Similarity=0.542  Sum_probs=78.1

Q ss_pred             hccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCC
Q 044410          295 MSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGL  373 (402)
Q Consensus       295 L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~  373 (402)
                      |+++|+++ +|| +|++||.|.++++.+++.+|+++++++.+   +++|||+++||+|++|++++++    |++++|   
T Consensus         1 L~~~g~~~-~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~---~~~~Gn~~sa~~~~~L~~~~~~----g~~~~G---   69 (90)
T PF08541_consen    1 LERAGLSP-DDIDHFIPHQASKKILDSIAKRLGIPPERFPDN---LAEYGNTGSASIPINLADALEE----GRIKPG---   69 (90)
T ss_dssp             HHHTT--G-GGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T---HHHH-B-GGGHHHHHHHHHHHT----TSSCTT---
T ss_pred             CccccCCH-HHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH---HhccCcchhhhHHHHHHHHHHc----CCCCCC---
Confidence            67899997 999 99999999999999999999999999875   8999999999999999999998    899999   


Q ss_pred             ceEEEEEEcccccceeeEEee
Q 044410          374 ECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       374 d~vll~~~G~G~~~~~~ll~~  394 (402)
                      |+|+++++|+|++|+++++||
T Consensus        70 d~vl~~~~G~G~~~~~~~~~~   90 (90)
T PF08541_consen   70 DRVLLVGFGAGFSWGAAVLRW   90 (90)
T ss_dssp             EEEEEEEEETTTEEEEEEEE-
T ss_pred             CEEEEEEEEhhheeEEEEEEC
Confidence            999999999999999999998

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=99.83  E-value=5.6e-19  Score=166.31  Aligned_cols=250  Identities=16%  Similarity=0.144  Sum_probs=166.0

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      +..+|+.+|+++||+++|++++|||++++++. +. .+..+..+++.||++     .++++++|+++..||.+|..+|++
T Consensus        49 Ae~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~-Q~~~As~vA~~LGIP-----~fdV~~ACSTf~~AL~lAa~lI~S  121 (327)
T TIGR02845        49 AERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN-QIITANFVARDLGIP-----FLGLYGACSTSMETLALGAMLVDG  121 (327)
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC-cccHHHHHHHHhCCC-----EEEEeccCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999998863 32 345689999999973     589999999999999999999999


Q ss_pred             CCCCeEEEEEeccCcc---ccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccc
Q 044410          188 NPGARVLVVCSDIRVL---DFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISG  264 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  264 (402)
                      |.+++|||++++..|.   .|+.|.+...+++.+..+|||||+|+||++.+..+     ...-...+..        +++
T Consensus       122 G~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~~~~-----~i~~~t~gkv--------~d~  188 (327)
T TIGR02845       122 GFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGGP-----RITSATIGKV--------VDY  188 (327)
T ss_pred             CCCCEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecCCCC-----ceEEEEEEEE--------Eec
Confidence            9999999999999872   24445221112345789999999999999875411     2222222211        111


Q ss_pred             eeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc---CCCHHHHHHHHHHcCCCccccHHHHHHHH
Q 044410          265 QLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH---PGGDGLLDQVEKTLGLRKEKLWASRYVLR  340 (402)
Q Consensus       265 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~~~~~~~~~~~~~lgi~~ek~~~~~~~l~  340 (402)
                      .+.+   -+.||.-    +.......|.+.|++.|.++ ++. .++.-   ..++.++..+.++-|++.++.+      .
T Consensus       189 g~~d---~~nmgaa----mapaa~dti~~h~~d~~~~~-~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~------~  254 (327)
T TIGR02845       189 GITD---PLDMGAA----MAPAAADTIEAHFKDTGRSV-DDYDLIVTGDLARVGSEILRKLLKERGYDVTERY------D  254 (327)
T ss_pred             CCCC---cccchhh----hhHHHHHHHHHHHHHcCCCh-hhccEEEecchHHHHHHHHHHHHHHcCCChhhcc------c
Confidence            1111   1223322    23344467778899999997 887 55432   3567888888888787654322      2


Q ss_pred             hcC----------C---CCc-chHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410          341 EYG----------N---MGA-PSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF  399 (402)
Q Consensus       341 ~~G----------n---~~s-asi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~  399 (402)
                      ++|          |   .|+ +|..+...+++++      ++.|. ..+||+++.|+=++- ....+-..+||
T Consensus       255 dcg~~iy~~~~~~~aggsgc~csa~v~~~~~~~~------~~~g~-~~r~l~v~tgalls~-~s~~q~esip~  319 (327)
T TIGR02845       255 DCGVMIYRPDQQVFAGGSGCACSAVVTYGHILKE------MLRGK-LKKVLVVATGALLSP-TTFQQGESIPG  319 (327)
T ss_pred             cCCeEEEcCCCcccCCCcccchhHHHHHHHHHHH------HhcCc-ceEEEEEEchhhcCc-chhccCCcCch
Confidence            333          2   222 2333334455544      33341 368999999985543 23444455554

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>PRK08304 stage V sporulation protein AD; Validated

Probab=99.80  E-value=3.9e-18  Score=160.94  Aligned_cols=256  Identities=16%  Similarity=0.142  Sum_probs=168.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      +..+|+.+|+++||+++|++++|||++|+++...+  +..+..+++.||+   +  ++++.++|+++..||.+|..+|++
T Consensus        55 AeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI---P--a~dV~gACST~~~AL~lAa~lI~S  127 (337)
T PRK08304         55 AERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI---P--FLGLYGACSTMMESLALGSMLIDG  127 (337)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC---c--EEEEeccCHHHHHHHHHHHHHHhc
Confidence            46799999999999999999999999999875323  4578899999997   2  789999999999999999999999


Q ss_pred             CCCCeEEEEEeccCcc---ccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccc
Q 044410          188 NPGARVLVVCSDIRVL---DFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISG  264 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  264 (402)
                      |.+++|||++++..+.   .|+.|.+...+...+..+++|||+|+||++... .    +...-...+..        +++
T Consensus       128 G~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~~-~----~~i~~~t~Gkv--------~D~  194 (337)
T PRK08304        128 GFADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREGS-G----PRITHATIGKV--------VDL  194 (337)
T ss_pred             CCCCEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCCC-C----ceEEEEeEEEE--------Eec
Confidence            9999999999999874   476674433333457889999999999998654 1    12222222211        111


Q ss_pred             eeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc---CCCHHHHHHHHHHcCCCccccHHHHH--H
Q 044410          265 QLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH---PGGDGLLDQVEKTLGLRKEKLWASRY--V  338 (402)
Q Consensus       265 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~~~~~~~~~~~~~lgi~~ek~~~~~~--~  338 (402)
                      .+.+   -+.||.-    +.......|.+.|++.|.++ +|. .++.-   ..++.|+..+.++-|++.++.+...-  +
T Consensus       195 g~~d---~~nmgaa----MapAa~dti~~h~~d~~~~~-~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~i  266 (337)
T PRK08304        195 GIKD---PNDMGAA----MAPAAADTIQQHFKDTGRSP-EDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMI  266 (337)
T ss_pred             CCCC---cccchhh----hhHHHHHHHHHHHHHcCCCh-hhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEE
Confidence            1111   1223322    23344467778899999997 887 44432   35678888888888887653322100  0


Q ss_pred             HH--h----cCCCCc-chHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410          339 LR--E----YGNMGA-PSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF  399 (402)
Q Consensus       339 l~--~----~Gn~~s-asi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~  399 (402)
                      ++  +    -|-.|+ +|..+...+++++      ++.|. ..+||+++.|+=++- ....+-..+||
T Consensus       267 y~~~~q~~~aGgSGc~csa~v~~~~~~~~------~~~g~-~~rvl~v~tGaLls~-~s~~qgesip~  326 (337)
T PRK08304        267 YDSEQQDVFAGGSGCACSAVVTYGYLLKE------LQKGK-LKRVLVVATGALLSP-TSSQQGESIPG  326 (337)
T ss_pred             eccCCCcccCCCcccchhHHHHHHHHHHH------HhcCC-ceEEEEEEchhhcCc-chhccCCcCCh
Confidence            10  0    122332 2333333455543      33331 368999999985543 23444445554

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=99.80  E-value=1.4e-19  Score=156.08  Aligned_cols=164  Identities=24%  Similarity=0.287  Sum_probs=127.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      |+|.+++.|+|+..++.++|++.-+   ..         ..++....|.++..+..+.|                     
T Consensus         5 VGI~~i~~y~p~~~v~~~~La~~~g---~d---------~~K~~~glgq~~~av~~~~E---------------------   51 (174)
T PF01154_consen    5 VGIDAIEFYIPRYYVDQEELAEARG---VD---------PGKYTIGLGQEKMAVPPPDE---------------------   51 (174)
T ss_dssp             EEEEEEEEE-ESEEEEHHHHHHHTT---S----------TCHHHTTT--SEEEE--TTS---------------------
T ss_pred             ccEeEEEEecCceEecHHHHHHHhC---CC---------HHHhhhhcCeeEEEeCCCcc---------------------
Confidence            8999999999999999999987621   11         14566678888889988776                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCC--CccccceeeccccchHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLK--PSVNRLMIYTQGCYMGGTVIRL  180 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~--~~~~~~~~i~~~C~~~~~al~~  180 (402)
                          .+..||+.|++++|++.++++++|+.|+++|.+. +...+.+.+|++.||+.  ..+ +.+++.++|.|+..||+.
T Consensus        52 ----D~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~-~~~e~k~ACygGTaAL~~  126 (174)
T PF01154_consen   52 ----DIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDC-RGVEMKQACYGGTAALQN  126 (174)
T ss_dssp             -----HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSS-EEEEEESGGGHHHHHHHH
T ss_pred             ----cHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCce-eeeehhhhhHHHHHHHHH
Confidence                3999999999999999999999999999999998 77889999999999994  333 478999999999999999


Q ss_pred             HHHHHHcCC--CCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCC
Q 044410          181 AKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       181 A~~~i~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                      |..+++++.  .+++|||++|.....   +..       ...+-|-||+|+||+++.
T Consensus       127 a~~~v~s~~~~g~~aLVVasDiA~y~---~g~-------~e~TqGAGAVAmLi~~na  173 (174)
T PF01154_consen  127 AVNWVASSPWDGRKALVVASDIARYD---LGS-------AEPTQGAGAVAMLIGPNA  173 (174)
T ss_dssp             HHHHHCSTTSTTEEEEEEEEEEE--S---TTT-------TGGG-EEEEEEEEEECS-
T ss_pred             HHHHHhcCCCCCCeEEEEeccccccC---CCC-------ccccccceeEEEEecCCC
Confidence            999999974  679999999998632   111       245789999999999864

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=99.73  E-value=1.5e-16  Score=159.40  Aligned_cols=259  Identities=15%  Similarity=0.157  Sum_probs=169.3

Q ss_pred             HhhHHHHHHHHHHHHHHHcCCCCCCccE----EEEEecCC---------------------------CCCCCHHHHHHHH
Q 044410          106 IDEVPKLGKEAALKAIKEWGQPVSKITH----LIFSAFYG---------------------------VDMPGADVRLMRL  154 (402)
Q Consensus       106 ~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~---------------------------~~~p~~a~~i~~~  154 (402)
                      .+....|+.+|+++||+++|++++++|.    ++++++.+                           ...+..+.+|+..
T Consensus        68 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  147 (406)
T cd00834          68 MDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIR  147 (406)
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHH
Confidence            3457899999999999999999877653    55555432                           1224578899999


Q ss_pred             cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc---------------------cCCCCccch
Q 044410          155 LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD---------------------FHEPSETHL  213 (402)
Q Consensus       155 LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~---------------------~~~~~~~~~  213 (402)
                      ||++..   .+.+..+|++++.||..|..+|++|.++++||+++|..+..                     ...|.+.+ 
T Consensus       148 lgl~g~---~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~-  223 (406)
T cd00834         148 LGLRGP---NYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKD-  223 (406)
T ss_pred             hCCCCc---ccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCC-
Confidence            999753   67899999999999999999999999999999999987610                     01122211 


Q ss_pred             hhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410          214 DVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS  292 (402)
Q Consensus       214 ~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~  292 (402)
                         ...+++||||+|+||++.+.... .......+.+.+...              ++..... ..   .....+.++++
T Consensus       224 ---~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~--------------d~~~~~~-~~---~~~~~~~~~i~  282 (406)
T cd00834         224 ---RDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASS--------------DAYHITA-PD---PDGEGAARAMR  282 (406)
T ss_pred             ---CCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecc--------------cCCCCCC-CC---CCcHHHHHHHH
Confidence               13679999999999997654111 001123343332210              0000000 00   01234567889


Q ss_pred             HhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410          293 NAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK  366 (402)
Q Consensus       293 ~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~  366 (402)
                      ++|+++|+++ +|| ++.+|..+...     .+.+.+.++-..++++.+ ..-..+||+.+|+-++.|..++.. +.+|.
T Consensus       283 ~al~~agi~~-~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~  359 (406)
T cd00834         283 AALADAGLSP-EDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVS-STKSMTGHLLGAAGAVEAIATLLA-LRDGV  359 (406)
T ss_pred             HHHHHcCCCH-HHCCEEecccccCccccHHHHHHHHHHhcccCCCCcee-CcchhhccchhhhhHHHHHHHHHH-HhcCC
Confidence            9999999997 999 99999776544     334555566543444442 235578999999988887665432 11133


Q ss_pred             ccCC-------------------C--CCceEEEEEEcccccceeeEE
Q 044410          367 ATTG-------------------E--GLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       367 i~~G-------------------~--~~d~vll~~~G~G~~~~~~ll  392 (402)
                      +.+-                   .  +..+++..+||.|.+-.+++|
T Consensus       360 ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl  406 (406)
T cd00834         360 LPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF  406 (406)
T ss_pred             cCCCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence            2210                   0  014678888998887777664

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.71  E-value=5.9e-16  Score=154.09  Aligned_cols=95  Identities=15%  Similarity=0.148  Sum_probs=85.6

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.||++++++ ...+..+..++..+|++... ++++++.+|++++.++..|.++|+
T Consensus        25 ~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~-p~~~V~~~Casg~~ai~~A~~~I~  103 (393)
T PRK05656         25 PAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSV-PAMTLNKVCGSGLKALHLAAQAIR  103 (393)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCc-ceEEecccchhHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998876 45677888899999998622 289999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|..+.+||+++|++|.
T Consensus       104 sG~~d~vLv~G~E~ms~  120 (393)
T PRK05656        104 CGDAEVIIAGGQENMSL  120 (393)
T ss_pred             cCCCCEEEEEEEhhhcc
Confidence            99999999999998764

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=99.70  E-value=5.9e-16  Score=156.07  Aligned_cols=262  Identities=15%  Similarity=0.147  Sum_probs=171.5

Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-CC-------------------CCCHHHHHHHHcCCCC
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-VD-------------------MPGADVRLMRLLGLKP  159 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~~-------------------~p~~a~~i~~~LGl~~  159 (402)
                      +..+....|+.+|+++||+++|+++++||    .|+++++++ +.                   .+..+.+|+..||+..
T Consensus        82 ~~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g  161 (424)
T smart00825       82 EAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG  161 (424)
T ss_pred             HhcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC
Confidence            34455678999999999999999999998    788887643 21                   3456788999999976


Q ss_pred             ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------c------CCCCccchhhhhhhhhhc
Q 044410          160 SVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------F------HEPSETHLDVLVVQAVFG  223 (402)
Q Consensus       160 ~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~------~~~~~~~~~~~~~~~lfG  223 (402)
                      .   .+.+..+|++++.||..|.++|++|..+.|||+++|.....          +      ..|.+.+    ...+++|
T Consensus       162 ~---~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~----~~g~~~g  234 (424)
T smart00825      162 P---SVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD----ADGYVRG  234 (424)
T ss_pred             C---ccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC----CCccccc
Confidence            3   68899999999999999999999999999999999974310          0      1122211    2467899


Q ss_pred             cCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCC
Q 044410          224 DGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISD  302 (402)
Q Consensus       224 DGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~  302 (402)
                      |||+|+||++.+.... ......++.+.+.......              .  +...+  ....+..+++++|+++|+++
T Consensus       235 eGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~--------------~--~~~~~--~~~~~~~a~~~al~~Agl~~  296 (424)
T smart00825      235 EGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRS--------------N--GLTAP--SGPAQARLIRQALARAGVDP  296 (424)
T ss_pred             ceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCC--------------C--CCCCc--CHHHHHHHHHHHHHHhCCCH
Confidence            9999999997544111 0011223443322110000              0  00001  12345578899999999997


Q ss_pred             Ccce-EEEEcCCCHH-----HHHHHHHHcCCCc---cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc-----
Q 044410          303 WNSL-FYVVHPGGDG-----LLDQVEKTLGLRK---EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT-----  368 (402)
Q Consensus       303 ~~di-~~i~H~~~~~-----~~~~~~~~lgi~~---ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~-----  368 (402)
                       +|| ++.+|-.+..     -.+.+.+.++...   .+++.+ .+-..+||+.+|+-.+.|...+.. +.++.+.     
T Consensus       297 -~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip~~~~~  373 (424)
T smart00825      297 -ADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLG-SVKSNIGHLEAAAGVAGLIKVVLA-LRHGTIPPTLHF  373 (424)
T ss_pred             -HHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEe-ccccccCCcccchhHHHHHHHHHH-HhCCCCCCCCCC
Confidence             999 9999955432     3445666665421   233332 123457999999888777654421 0002111     


Q ss_pred             ---------------------C---CCCCceEEEEEEcccccceeeEEe
Q 044410          369 ---------------------T---GEGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       369 ---------------------~---G~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                                           +   +...+.++..+||-|...++++|+
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~  422 (424)
T smart00825      374 ETPNPHIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE  422 (424)
T ss_pred             CCCCCCCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence                                 0   001267899999999888888886

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.70  E-value=5.2e-16  Score=154.39  Aligned_cols=252  Identities=14%  Similarity=0.106  Sum_probs=167.7

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKP-SVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~-~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|+++||+++|++++|||.||++++++ +..|..+..++..||++. .+  +++++++|++++.+|.+|.++|
T Consensus        21 ~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~--~~~v~~~c~s~~~al~~A~~~I   98 (386)
T cd00751          21 SADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVP--ATTVNRVCGSGLQAVALAAQSI   98 (386)
T ss_pred             CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc--hhhhccccHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999987776 556778888999999985 43  7899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCccc-c----------CC--------CC---c---c----------------chhh---------
Q 044410          186 ENNPGARVLVVCSDIRVLD-F----------HE--------PS---E---T----------------HLDV---------  215 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~~-~----------~~--------~~---~---~----------------~~~~---------  215 (402)
                      ++|..++|||+++|++|.. +          ..        |.   +   .                .+++         
T Consensus        99 ~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~  178 (386)
T cd00751          99 AAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH  178 (386)
T ss_pred             HCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            9999999999999987531 0          00        00   0   0                0000         


Q ss_pred             -h----------------------------------------------------------hhhhhhccCcEEEEEccCCC
Q 044410          216 -L----------------------------------------------------------VVQAVFGDGAGAAIIGADSD  236 (402)
Q Consensus       216 -~----------------------------------------------------------~~~~lfGDGAaA~vL~~~~~  236 (402)
                       +                                                          .....++|||+|+||.+.+.
T Consensus       179 ~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~~  258 (386)
T cd00751         179 QRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEK  258 (386)
T ss_pred             HHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHHH
Confidence             0                                                          00012246666666655432


Q ss_pred             CCCCC-CCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCC
Q 044410          237 ISNHE-SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGG  314 (402)
Q Consensus       237 ~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~  314 (402)
                      ..... .+...+.+.+...    .                +...   .......+++++++++|+++ +|| ++-+|-..
T Consensus       259 a~~~~~~~~~~I~g~~~~~----~----------------~~~~---~~~~~~~a~~~a~~~Agi~~-~did~~e~~d~f  314 (386)
T cd00751         259 AKELGLKPLARIVGYAVAG----V----------------DPAI---MGIGPVPAIPKALKRAGLTL-DDIDLIEINEAF  314 (386)
T ss_pred             HHHCCCCeeEEEEEEEEcc----C----------------CCcc---cchhHHHHHHHHHHHcCCCH-HHcCEEEeechh
Confidence            00000 1112233222110    0                0000   01123478889999999997 999 88899766


Q ss_pred             HHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEe
Q 044410          315 DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       315 ~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                      ....-...+.||+.+..+..+ --.-.+||+..|+-...+.+++.+..  |+  .+   .+.+...-|+|...+++|++
T Consensus       315 ~~~~~~~~e~lg~~~~pvn~~-GG~l~~Gh~~gasG~~~~~e~~~qL~--g~--~~---~~gl~~~~~~gg~g~~~~ie  385 (386)
T cd00751         315 AAQALACLKELGLDPEKVNVN-GGAIALGHPLGASGARIVVTLLHELK--RR--GG---RYGLATMCIGGGQGAAMVIE  385 (386)
T ss_pred             HHHHHHHHHHhCCChhhcCCC-cchHhhCccHHHHHHHHHHHHHHHHH--hc--CC---CEEEEEEcccccceEEEEEE
Confidence            555555678899876444432 12336899999988888888777521  21  23   56677667777777777776

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK09051 beta-ketothiolase; Provisional

Probab=99.68  E-value=2.7e-15  Score=149.17  Aligned_cols=95  Identities=12%  Similarity=0.009  Sum_probs=83.0

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCC-CCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDM-PGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~-p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|+++||+++|++++|||.||++++++ ... +..+..++..+|++.... +++++.+|+|++.|+..|.++|
T Consensus        26 ~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~V~~aCaSg~~Al~~A~~~I  104 (394)
T PRK09051         26 APTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETP-AFNVNRLCGSGLQAIVSAAQAI  104 (394)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCc-eEEecccchHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999887 433 456666777889974222 8999999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|..+.|||+++|++|.
T Consensus       105 ~sG~~d~vLvvG~E~mS~  122 (394)
T PRK09051        105 LLGDADVAIGGGAESMSR  122 (394)
T ss_pred             HcCCCCEEEEEeehhccc
Confidence            999999999999999874

>PRK12404 stage V sporulation protein AD; Provisional

Probab=99.67  E-value=9.5e-15  Score=137.31  Aligned_cols=257  Identities=17%  Similarity=0.153  Sum_probs=164.8

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +...+|+.+|+++||+++|++++|||+++.++...+..|+  ..+++.||++     .+.+.++|+++..||.+|..+|+
T Consensus        52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP-----~~gV~gACSTg~eAL~lAa~~Va  124 (334)
T PRK12404         52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP-----YLGLFGACSTSMEGLALAALIVN  124 (334)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC-----ccceeecCHHHHHHHHHHHHHHH
Confidence            3577999999999999999999999999999887555555  5999999955     57899999999999999999999


Q ss_pred             cCCCCeEEEEEeccCc---cccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCccccc
Q 044410          187 NNPGARVLVVCSDIRV---LDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYIS  263 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s---~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  263 (402)
                      +|.+++||++++...+   +.|+.|.+...+...+..+---||+|+||++... .    +...-...+..        ++
T Consensus       125 SG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~-~----~~i~~~T~Gkv--------~D  191 (334)
T PRK12404        125 SGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGD-G----PRVTSATIGRV--------VD  191 (334)
T ss_pred             cCCCCEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCC-C----ceEEEEEEEEE--------Ee
Confidence            9999999999988875   3466665432223334556668999999987643 1    12222222211        11


Q ss_pred             ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc---CCCHHHHHHHHHHcCCCc-cccHHHHH-
Q 044410          264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH---PGGDGLLDQVEKTLGLRK-EKLWASRY-  337 (402)
Q Consensus       264 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~~~~~~~~~~~~~lgi~~-ek~~~~~~-  337 (402)
                      +.+.+   -+.||.-    +.......|.+.|++.|.++ +|. .++.-   ..++.|+..+.++-|++. ++.+...- 
T Consensus       192 ~g~~d---~~nMGaa----MAPAA~dti~~h~~d~~~~~-~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~  263 (334)
T PRK12404        192 MGLTD---PFNMGGA----MAPAAVDTIEAHLRDRQIDA-SYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDCGL  263 (334)
T ss_pred             cCCCC---cccchhh----hhHHHHHHHHHHHHHhCCCh-hhccEEEEcchHHHHHHHHHHHHHHcCCCCCcccccccCe
Confidence            11111   1223322    23334467778889999997 887 55432   356788888888877765 32221000 


Q ss_pred             -HH---H--hcCCCCc-chHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410          338 -VL---R--EYGNMGA-PSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF  399 (402)
Q Consensus       338 -~l---~--~~Gn~~s-asi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~  399 (402)
                       ++   +  .-|-.|+ +|..+...+++++      ++.|. ..+||+++.|+=++- ....+-..+||
T Consensus       264 ~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~------~~~g~-~~rvL~v~TGALlS~-~s~~qgesIP~  324 (334)
T PRK12404        264 LIYREGQPVIAGASGPGCSATVTYGHLLNR------MKRGE-LKRILVVATGALLSP-LSFQQGETIPC  324 (334)
T ss_pred             EEecCCCcccCCCcccchHHHHHHHHHHHH------HhcCC-ceEEEEEEchhhcCc-chhccCCcCCh
Confidence             00   0  1122232 2333334455544      33341 368999999985543 23444444554

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.66  E-value=5.3e-15  Score=147.39  Aligned_cols=252  Identities=17%  Similarity=0.110  Sum_probs=167.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-C--CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-V--DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~--~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|+++||+++|++++|||.|+++++.+ .  ..+..+..++..||++..+  .+.++++|+++..+|..|..+
T Consensus        21 ~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~aCasg~~ai~~A~~~   98 (389)
T PRK06064         21 SLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIP--ATRVEAACASGGAALRQAYLA   98 (389)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCC--eeEEeCCcHHHHHHHHHHHHH
Confidence            3789999999999999999999999999988765 3  2467888999999998544  788999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcccc----------------CCCCccc------------------------------hh----
Q 044410          185 AENNPGARVLVVCSDIRVLDF----------------HEPSETH------------------------------LD----  214 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~~~----------------~~~~~~~------------------------------~~----  214 (402)
                      |++|.+++|||+++|.++...                ..|....                              ++    
T Consensus        99 I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~  178 (389)
T PRK06064         99 VASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSK  178 (389)
T ss_pred             HHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh
Confidence            999999999999999765210                0010000                              00    


Q ss_pred             -------------------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecC
Q 044410          215 -------------------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEM  269 (402)
Q Consensus       215 -------------------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  269 (402)
                                               .......++|||+|+||++.+...........+.+.+....+..           
T Consensus       179 np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v~I~g~g~~~~~~~-----------  247 (389)
T PRK06064        179 NPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASDTIA-----------  247 (389)
T ss_pred             CcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcCCCeEEEEEEEecCccc-----------
Confidence                                     00011256999999999875431111111234554432211000           


Q ss_pred             ceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc----------------cc
Q 044410          270 GTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KL  332 (402)
Q Consensus       270 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~  332 (402)
                         +...+++..  ......+++++|+++|+++ +|| ++-+|-......-...+.||+.+.                ++
T Consensus       248 ---~~~~~~~~~--~~~~~~a~~~al~~aGi~~-~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~  321 (389)
T PRK06064        248 ---LHDRKDFTT--LDAAVVAAEKAYKMAGIEP-KDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDI  321 (389)
T ss_pred             ---ccccccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence               000011110  1233467889999999997 999 999998877776677899998642                22


Q ss_pred             HHHHHH---HHhcCCCCcchHHHHHHHHHHhhhhhhcc------cCCCCCceEEEEEEccc
Q 044410          333 WASRYV---LREYGNMGAPSVFFILDEVRKKSIEEMKA------TTGEGLECGVLFGFGPG  384 (402)
Q Consensus       333 ~~~~~~---l~~~Gn~~sasi~i~L~~~~~~~~~~g~i------~~G~~~d~vll~~~G~G  384 (402)
                      +.|  .   .--+||...++-...+.+++.+..  |+-      -+|  .++.+..++|..
T Consensus       322 pvN--~~GG~l~~Ghp~~a~G~~~~~e~~~qL~--g~a~~g~rqv~~--a~~~l~~~~g~~  376 (389)
T PRK06064        322 PVN--PSGGLKAKGHPVGATGVSQAVEIVWQLR--GEAEKGRQQVIG--AGYGLTHNVGGT  376 (389)
T ss_pred             eec--CCCCcccCCCCcchhHHHHHHHHHHHHh--CCCCCCCccCCC--ccEEEEecCCCc
Confidence            332  1   123899998888888887776522  221      123  267777777743

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=99.66  E-value=2.5e-15  Score=149.40  Aligned_cols=94  Identities=14%  Similarity=0.111  Sum_probs=84.5

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKP-SVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~-~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|+++||+++|++++|||.+++++.++ ...|..+..++..+|++. .+  +++++.+|++++.+|..|.++|
T Consensus        20 t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~--~~~v~~~Casg~~al~~A~~~I   97 (386)
T TIGR01930        20 SAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVP--AYTVNRQCASGLQAVILAAQLI   97 (386)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCce--eeeecchhhHHHHHHHHHHHHH
Confidence            4789999999999999999999999999988776 445777888999999985 44  7899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|.+++|||+++|+++.
T Consensus        98 ~sG~~~~vLv~g~e~~s~  115 (386)
T TIGR01930        98 RAGEADVVVAGGVESMSR  115 (386)
T ss_pred             HCCCCCEEEEEEehhhcc
Confidence            999999999999998653

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.65  E-value=4.2e-15  Score=147.69  Aligned_cols=95  Identities=15%  Similarity=0.078  Sum_probs=85.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMP-GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p-~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|++++|+++|++++|||.||++++.+ ...| ..+..++..+|++... ++++++.+|+|++.||.+|.++|
T Consensus        26 ~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~-p~~~V~~aCaSg~~Al~~A~~~I  104 (392)
T PRK07108         26 HGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV-PGMTVNRFCSSGLQTIALAAQRV  104 (392)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC-ceeeecchhhHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999887 4444 4888999999998533 28999999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|.++.+|+++.|++|.
T Consensus       105 ~sG~~d~vlagGvE~ms~  122 (392)
T PRK07108        105 IAGEGDVFVAGGVESISC  122 (392)
T ss_pred             HCCCCCEEEEEEEeccCC
Confidence            999999999999999974

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.64  E-value=1.5e-14  Score=143.79  Aligned_cols=95  Identities=12%  Similarity=0.030  Sum_probs=84.1

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ++.+|+.+|++++|+++|+++++||.||+++.++ .. .+..+...+..+|++... ++++++.+|+|++.||.+|.++|
T Consensus        27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~-pa~~Vn~aCaSg~~Ai~~A~~~I  105 (402)
T PRK08242         27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETV-PGVQINRFCASGLEAVNLAAAKV  105 (402)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCC-CeEEEcchhhhHHHHHHHHHHHH
Confidence            4889999999999999999999999999999987 33 345666777888996543 38999999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|..+.+|++++|++|.
T Consensus       106 ~sG~~d~vLv~G~E~mS~  123 (402)
T PRK08242        106 RSGWDDLVIAGGVESMSR  123 (402)
T ss_pred             HcCCCCEEEEEEEEccCC
Confidence            999999999999999984

>PRK05790 putative acyltransferase; Provisional

Probab=99.64  E-value=1.5e-14  Score=144.28  Aligned_cols=253  Identities=16%  Similarity=0.120  Sum_probs=168.6

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKP-SVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~-~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|+++||+++|++++|||.|+++++++ ...+..+..++..+|++. .+  .++++.+|++++.+|..|.++|
T Consensus        25 ~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~--~~~v~~~Casg~~al~~A~~~I  102 (393)
T PRK05790         25 SAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVP--ALTINKVCGSGLKAVALAAQAI  102 (393)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCc--eeeecccchHHHHHHHHHHHHH
Confidence            4789999999999999999999999999988766 334455566777889874 33  7899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCccc-c-----C-----------C------CCcc-------------------chh---------
Q 044410          186 ENNPGARVLVVCSDIRVLD-F-----H-----------E------PSET-------------------HLD---------  214 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~~-~-----~-----------~------~~~~-------------------~~~---------  214 (402)
                      ++|..++|||+++|++|.. .     .           +      +.+.                   +++         
T Consensus       103 ~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~  182 (393)
T PRK05790        103 RAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALAS  182 (393)
T ss_pred             HcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence            9999999999999986421 0     0           0      0000                   000         


Q ss_pred             ------hhh------------------------------------------------------hhhhhccCcEEEEEccC
Q 044410          215 ------VLV------------------------------------------------------VQAVFGDGAGAAIIGAD  234 (402)
Q Consensus       215 ------~~~------------------------------------------------------~~~lfGDGAaA~vL~~~  234 (402)
                            ++.                                                      ....++|||+|+||++.
T Consensus       183 ~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~  262 (393)
T PRK05790        183 QQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSE  262 (393)
T ss_pred             HHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecH
Confidence                  000                                                      01244677777777764


Q ss_pred             CCCCCC-CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcC
Q 044410          235 SDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHP  312 (402)
Q Consensus       235 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~  312 (402)
                      +..... ..+..++.+.+....                    .....   ......+++++++++|+++ +|| ++-+|-
T Consensus       263 e~a~~~~~~~~~~I~g~~~~~~--------------------~~~~~---~~~~~~a~~~a~~~Agi~~-~did~~e~~d  318 (393)
T PRK05790        263 AKAKELGLTPLARIVSYAVAGV--------------------DPAIM---GIGPVPAIRKALEKAGWSL-ADLDLIEINE  318 (393)
T ss_pred             HHHHHCCCCeeEEEEEEEEccC--------------------CCCcc---chhHHHHHHHHHHHcCCCH-HHCCEEEeCc
Confidence            431100 011123443322100                    00000   0123467889999999997 999 888887


Q ss_pred             CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410          313 GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       313 ~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll  392 (402)
                      .-....-...+.||+...++..+ --.--+||...|+-...+.++.++.-  +  +.+   .+.+....|.|..-+++||
T Consensus       319 ~f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~--~--~~~---~~gl~~~~~~~g~g~~~~~  390 (393)
T PRK05790        319 AFAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMK--R--RGA---KKGLATLCIGGGQGVALIV  390 (393)
T ss_pred             HHHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHH--h--cCC---CeEEEEEeccCCceeEEEE
Confidence            54444445678899876665543 23456899999998888888887521  2  122   5677777777777788888


Q ss_pred             ee
Q 044410          393 QS  394 (402)
Q Consensus       393 ~~  394 (402)
                      +.
T Consensus       391 e~  392 (393)
T PRK05790        391 ER  392 (393)
T ss_pred             Ec
Confidence            75

>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]

Probab=99.63  E-value=1.6e-14  Score=135.98  Aligned_cols=308  Identities=19%  Similarity=0.168  Sum_probs=192.7

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++-.|+|.+.++|+|+++.-   ..+.         .++.-..|..+=-|+.+.|                     
T Consensus        12 vGI~aieiyfP~~yV~Q~elEk~d---~vs~---------gKytIGLGq~~MgfcsdrE---------------------   58 (462)
T KOG1393|consen   12 VGIIAIEIYFPSQYVDQEELEKFD---GVSA---------GKYTIGLGQTQMGFCSDRE---------------------   58 (462)
T ss_pred             cceeEEEEEcCccccChhhHhhcC---Cccc---------cceEeccCcceecccCchh---------------------
Confidence            899999999999999999998652   1111         1222233444444444433                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcC--CCCccccceeeccccchHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLG--LKPSVNRLMIYTQGCYMGGTVIRL  180 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LG--l~~~~~~~~~i~~~C~~~~~al~~  180 (402)
                          ....|+.-+.++++++..++++.|..|-++|.|- .-..+.-..+.+.++  -..+.. ..|..++|.|+..||-.
T Consensus        59 ----Di~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIE-GiDttnACYGGtaALfn  133 (462)
T KOG1393|consen   59 ----DIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIE-GIDTTNACYGGTAALFN  133 (462)
T ss_pred             ----hhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccc-cccccccccccHHHHHH
Confidence                3788999999999999999999999999999886 555566667777666  344554 78899999999999999


Q ss_pred             HHHHHHcC--CCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEE---Eeeeeeec
Q 044410          181 AKDIAENN--PGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQI---LSCTQTTV  255 (402)
Q Consensus       181 A~~~i~~g--~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~---~~~~~~~~  255 (402)
                      |..+|++.  ..+.+|||++|..-..- .+         ...+=|-||+|++++++.. -.++ +.++.   .......-
T Consensus       134 avnWiESssWDGr~aivV~gDIAvY~~-G~---------aRpTGGAgAVAmLIgPnAp-i~fe-rglr~thM~hayDFyK  201 (462)
T KOG1393|consen  134 AVNWIESSSWDGRYAIVVCGDIAVYAK-GN---------ARPTGGAGAVAMLIGPNAP-IIFE-RGLRATHMQHAYDFYK  201 (462)
T ss_pred             HhhhhhhcccCCceeEEEEeeEEEecC-CC---------CCCCCCcceEEEEEcCCCc-eEec-ccchhhhhhhhhhccC
Confidence            99999987  47999999999976310 11         2345699999999999865 1100 01110   00000011


Q ss_pred             CCCcccccceeecCceEEEeCCchhHHHHHhHH--------HHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHc-
Q 044410          256 PDTENYISGQLKEMGTYCHLSRDVPVAIGNYVD--------KCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTL-  325 (402)
Q Consensus       256 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~--------~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~l-  325 (402)
                      |.-...   ..--+      |+.........+.        ++.+.-.+.-+... ++. ++++|.+--++.++-..+| 
T Consensus       202 Pdl~SE---yPvVD------GklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l-~~fdy~ifHsP~cKlvqKs~arl~  271 (462)
T KOG1393|consen  202 PDLLSE---YPVVD------GKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNL-NSFDYIIFHSPYCKLVQKSLARLL  271 (462)
T ss_pred             CCCCCc---Cceec------CeehHHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccCCeEEEeCchhhhHHHHHHHhh
Confidence            211000   00011      2221222222222        22222223334444 577 8999988666555411111 


Q ss_pred             -----------------------------------------CCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410          326 -----------------------------------------GLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE  364 (402)
Q Consensus       326 -----------------------------------------gi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~  364 (402)
                                                               .+-.+|+-.+.-.-.+.||+.++|++..|..++.....+
T Consensus       272 ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~d  351 (462)
T KOG1393|consen  272 YNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPAD  351 (462)
T ss_pred             hhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHHhccchh
Confidence                                                     111112222210113789999999999999999863211


Q ss_pred             hcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          365 MKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       365 g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                        --.|   ++|+++++|+|++.+..-+|+.+
T Consensus       352 --~l~G---krig~FSYGSGlAAs~fs~~v~~  378 (462)
T KOG1393|consen  352 --ELAG---KRIGMFSYGSGLAASMFSLRVTQ  378 (462)
T ss_pred             --hhhc---cEEEEEeecCcchhheEEEEecC
Confidence              1246   89999999999999888888754

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.62  E-value=1.2e-14  Score=144.61  Aligned_cols=95  Identities=16%  Similarity=0.074  Sum_probs=81.0

Q ss_pred             hHHHHHHHHHHHHHHHc-CCCCCCccEEEEEecCC-CCCCCHHHH-HHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEW-GQPVSKITHLIFSAFYG-VDMPGADVR-LMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~~~-~~~p~~a~~-i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|++++|+++ |++++|||.||++++.+ ...+....+ +...+|++... ++++++.+|++++.|+..|..+
T Consensus        30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~-p~~~V~~aCaSg~~Al~~A~~~  108 (399)
T PRK09052         30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSV-GGVTVNRFCASGLQAVAMAADR  108 (399)
T ss_pred             CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCC-ceeeecchhhHHHHHHHHHHHH
Confidence            47899999999999997 99999999999998887 444444444 55566998522 2899999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |++|..+.|||+++|++|.
T Consensus       109 I~sG~~d~vLv~G~E~mS~  127 (399)
T PRK09052        109 IRVGEADVMIAAGVESMSM  127 (399)
T ss_pred             HHCCCCCEEEEEEEecccc
Confidence            9999999999999998874

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=99.62  E-value=3.6e-14  Score=140.82  Aligned_cols=233  Identities=16%  Similarity=0.051  Sum_probs=160.6

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.++++++.+ ...+..+..++..||++..+  .+.++.+|++++.++..|.++|+
T Consensus        15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~~c~sg~~al~~Aa~~I~   92 (375)
T cd00829          15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKP--ATRVEAAGASGSAAVRAAAAAIA   92 (375)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcc--eeeEeCccHHHHHHHHHHHHHHH
Confidence            4889999999999999999999999999988766 44577889999999997544  78899999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcccc-----C----CCCc----c----c-hh----------------------------------
Q 044410          187 NNPGARVLVVCSDIRVLDF-----H----EPSE----T----H-LD----------------------------------  214 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~~~-----~----~~~~----~----~-~~----------------------------------  214 (402)
                      +|..+.|||+++|.++...     .    ++.+    .    . ..                                  
T Consensus        93 sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~n  172 (375)
T cd00829          93 SGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARN  172 (375)
T ss_pred             hCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC
Confidence            9999999999999876320     0    0000    0    0 00                                  


Q ss_pred             ------------------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCc
Q 044410          215 ------------------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMG  270 (402)
Q Consensus       215 ------------------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g  270 (402)
                                              .......++|||+|+||++.+.......+...+.+.+....+..   + +      
T Consensus       173 p~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~~~~~~~i~g~~~~~~~~~---~-~------  242 (375)
T cd00829         173 PYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAASDTPS---L-S------  242 (375)
T ss_pred             ChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhcCCCCeEEEEEEEecCCcc---c-c------
Confidence                                    00011246999999999876541111122334444332211000   0 0      


Q ss_pred             eEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCc--c----------------c
Q 044410          271 TYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRK--E----------------K  331 (402)
Q Consensus       271 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~--e----------------k  331 (402)
                           .+..+ ........+++++|+++|+++ +|| ++-+|-......-...+.||+.+  +                +
T Consensus       243 -----~~~~~-~~~~~~~~a~~~al~~Agl~~-~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~p  315 (375)
T cd00829         243 -----ERDDF-LSLDAARLAARRAYKMAGITP-DDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLP  315 (375)
T ss_pred             -----ccccc-cccHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCcc
Confidence                 00000 012334568899999999997 999 99999888878888899999987  3                2


Q ss_pred             cHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410          332 LWASRYVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       332 ~~~~~~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      +..+ --+-.+||...++-...+.++..+
T Consensus       316 vN~~-GG~la~Ghp~gatG~~~~~e~~~q  343 (375)
T cd00829         316 VNTS-GGLLSKGHPLGATGLAQAVEAVRQ  343 (375)
T ss_pred             ccCC-CchhcCCCCccHHHHHHHHHHHHH
Confidence            2221 012247999998887777776664

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=99.62  E-value=1.9e-14  Score=144.30  Aligned_cols=257  Identities=14%  Similarity=0.108  Sum_probs=165.5

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCC-cc----EEEEEecCC-----------------------CCC--CCHHHHHHHHcC
Q 044410          107 DEVPKLGKEAALKAIKEWGQPVSK-IT----HLIFSAFYG-----------------------VDM--PGADVRLMRLLG  156 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~~~~d-Id----~li~~s~~~-----------------------~~~--p~~a~~i~~~LG  156 (402)
                      +....|+..|+++||+++|+++++ ++    .++++++..                       ...  ...+.+|+..+|
T Consensus        70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g  149 (407)
T cd00828          70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL  149 (407)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence            457789999999999999998766 43    355555321                       111  457789999999


Q ss_pred             C-CCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcc--------------------ccCCCCccchhh
Q 044410          157 L-KPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL--------------------DFHEPSETHLDV  215 (402)
Q Consensus       157 l-~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~--------------------~~~~~~~~~~~~  215 (402)
                      + ...   .+.+..+|++++.||..|.++|++|..+.+||+++|..+.                    ....|.+.+   
T Consensus       150 l~~Gp---~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~---  223 (407)
T cd00828         150 SSHGP---IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET---  223 (407)
T ss_pred             cCCCC---CcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC---
Confidence            9 653   6889999999999999999999999999999999998641                    011132221   


Q ss_pred             hhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHh
Q 044410          216 LVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNA  294 (402)
Q Consensus       216 ~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~  294 (402)
                       ...+++||||+++||++.+..... .....++.+.+...              ++.... ...    -.+.+.++++++
T Consensus       224 -~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~--------------d~~~~~-~~~----~~~~~~~a~~~A  283 (407)
T cd00828         224 -RDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTT--------------DGAGRS-VPA----GGKGIARAIRTA  283 (407)
T ss_pred             -CCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEecc--------------CCCCCC-CCC----ChHHHHHHHHHH
Confidence             247899999999999986541110 01122333322211              110000 011    134566789999


Q ss_pred             hccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc
Q 044410          295 MSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT  368 (402)
Q Consensus       295 L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~  368 (402)
                      |+++|+++ +|| ++..|-.+...     .+.+.+.++-..+..+.+ .+-..+||+.+|+-++.|...+.. +.++.+.
T Consensus       284 l~~Agi~~-~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~Gh~~~Asg~~~l~~~~~~-l~~~~ip  360 (407)
T cd00828         284 LAKAGLSL-DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVT-AQKALFGHSKGAAGALQLIGALQS-LEHGLIP  360 (407)
T ss_pred             HHHcCCCH-HHcCEEecccccCccccHHHHHHHHHHHhccCCCceee-cccchhccchhhhhHHHHHHHHHH-HhcCccC
Confidence            99999997 999 99999665443     333444554321222221 146689999999988887665432 1113222


Q ss_pred             CC-------------------CC----CceEEEEEEcccccceeeEE
Q 044410          369 TG-------------------EG----LECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       369 ~G-------------------~~----~d~vll~~~G~G~~~~~~ll  392 (402)
                      +-                   .+    ..+++..+||.|.+-+++++
T Consensus       361 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~  407 (407)
T cd00828         361 PTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL  407 (407)
T ss_pred             CCCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence            10                   00    14678888998888777664

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.61  E-value=2.8e-14  Score=141.90  Aligned_cols=95  Identities=14%  Similarity=0.121  Sum_probs=83.9

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.||+++.++ ...+..+..++..+|++... ++++++.+|+|++.|+..|.++|+
T Consensus        25 ~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~-p~~~V~~~CaSg~~Al~~A~~~I~  103 (393)
T PRK08235         25 KATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEV-QTETVNKVCASGLRAVTLADQIIR  103 (393)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCc-ceeehhhhhhHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998876 23455667789999997433 289999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|..+.|||+++|++|.
T Consensus       104 sG~~d~vLvvG~E~ms~  120 (393)
T PRK08235        104 AGDASVIVAGGMESMSN  120 (393)
T ss_pred             CCCCCEEEEEeeecccc
Confidence            99999999999999874

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=99.61  E-value=2.5e-14  Score=143.42  Aligned_cols=261  Identities=15%  Similarity=0.153  Sum_probs=166.6

Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCCccE----EEEEecCC----------------------C----CCC-CHHHHHHH
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSKITH----LIFSAFYG----------------------V----DMP-GADVRLMR  153 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~----------------------~----~~p-~~a~~i~~  153 (402)
                      ..+....|+.+|+++||+++|+++++||.    ++++++..                      +    ..+ ..+.+|..
T Consensus        67 ~~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~  146 (407)
T TIGR03150        67 RMDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISI  146 (407)
T ss_pred             hcCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHH
Confidence            34456789999999999999999988886    66665321                      0    011 24567899


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c----------CCCCccc
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F----------HEPSETH  212 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~----------~~~~~~~  212 (402)
                      .+|+...   .+.+..+|++++.||..|..+|++|.++.+||+++|.....           +          ..|.+.+
T Consensus       147 ~~gl~g~---~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~  223 (407)
T TIGR03150       147 RYGAKGP---NHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD  223 (407)
T ss_pred             HhCCCCc---ccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC
Confidence            9999754   67889999999999999999999999999999999973210           0          0122211


Q ss_pred             hhhhhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410          213 LDVLVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL  291 (402)
Q Consensus       213 ~~~~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i  291 (402)
                      +    ..+++||||+|+||++.+..... ......+.+.+....              +..+. .+. +  .......++
T Consensus       224 ~----~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d--------------~~~~~-~~~-~--~~~~~~~ai  281 (407)
T TIGR03150       224 R----DGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGD--------------AYHIT-APA-P--EGEGAARAM  281 (407)
T ss_pred             C----CcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCC--------------CCCCC-CCC-C--CcHHHHHHH
Confidence            1    35789999999999976541110 011223443322100              00000 000 0  112345788


Q ss_pred             HHhhccCCCCCCcce-EEEEcCCCH-----HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhh
Q 044410          292 SNAMSPIGISDWNSL-FYVVHPGGD-----GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEM  365 (402)
Q Consensus       292 ~~~L~~~gl~~~~di-~~i~H~~~~-----~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g  365 (402)
                      +++|+++|+++ +|| ++.+|-.+.     .-...+.+.++-...+++.+ ..-..+||+.+|+-.+.+..++.. +.++
T Consensus       282 ~~Al~~Agi~~-~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~~~~~~~-l~~~  358 (407)
T TIGR03150       282 RAALKDAGINP-EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVS-STKSMTGHLLGAAGAIEAIFTVLA-IRDG  358 (407)
T ss_pred             HHHHHHcCCCH-hHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCcee-CCcchhchhHHHHHHHHHHHHHHH-HhcC
Confidence            89999999997 999 999997765     33555677777544445442 123467999888877766554432 1112


Q ss_pred             cccC--------------------CC-CCceEEEEEEcccccceeeEEe
Q 044410          366 KATT--------------------GE-GLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       366 ~i~~--------------------G~-~~d~vll~~~G~G~~~~~~ll~  393 (402)
                      .+.+                    +. +..+++..+||.|.+-.+++|+
T Consensus       359 ~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~  407 (407)
T TIGR03150       359 VVPPTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK  407 (407)
T ss_pred             CcCCCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence            2111                    10 1146788889998888887764

FabB sequences should fall well below the noise cutoff of this model.

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.60  E-value=3e-14  Score=142.33  Aligned_cols=95  Identities=16%  Similarity=0.116  Sum_probs=86.1

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.|+++++.+ ...|..+..++..+|++.... +++++.+|++++.++..|.++|+
T Consensus        25 ~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~V~~~CaSg~~Al~~A~~~I~  103 (404)
T PRK06205         25 PAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVP-GMQLDRRCGSGLQAVITAAMQVQ  103 (404)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc-eeehhhhhhHHHHHHHHHHHHHH
Confidence            4889999999999999999999999999998887 566788889999999984222 78999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|.++.|||+++|++|.
T Consensus       104 sG~~d~vLv~G~E~ms~  120 (404)
T PRK06205        104 TGAADVVIAGGAESMSN  120 (404)
T ss_pred             cCCCCEEEEeeehhhcc
Confidence            99999999999999873

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=99.59  E-value=9.9e-14  Score=138.02  Aligned_cols=234  Identities=13%  Similarity=0.030  Sum_probs=157.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.||++++.+ ...+..+..++..||++..+  .++++++|++++.+|..|..+|+
T Consensus        20 ~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~--~~~v~~~casg~~al~~A~~~I~   97 (385)
T PRK12578         20 SVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKV--PLRVEAMCATGLAASLTAYTAVA   97 (385)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCC--eeEEeccCHHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999988765 22344578899999998765  68999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCccc----------------cC-CCCc---c-----------------------------------
Q 044410          187 NNPGARVLVVCSDIRVLD----------------FH-EPSE---T-----------------------------------  211 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~~----------------~~-~~~~---~-----------------------------------  211 (402)
                      +|.+++|||+++|++|..                +. .|..   .                                   
T Consensus        98 sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~n  177 (385)
T PRK12578         98 SGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAMN  177 (385)
T ss_pred             CCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcC
Confidence            999999999999986521                00 0000   0                                   


Q ss_pred             ---------chh------------hhhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccceeecC
Q 044410          212 ---------HLD------------VLVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEM  269 (402)
Q Consensus       212 ---------~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  269 (402)
                               +.+            .......++|||+|+||.+.+..... ..+...+.+.+....+..     +.    
T Consensus       178 p~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~-----~~----  248 (385)
T PRK12578        178 PKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAY-----VA----  248 (385)
T ss_pred             ChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCccc-----cc----
Confidence                     000            11223356799999999875431110 012344554433211110     00    


Q ss_pred             ceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc----------------cc
Q 044410          270 GTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KL  332 (402)
Q Consensus       270 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~  332 (402)
                           ..+++..  ......+++++|+++|+++ +|| ++-+|-....+--...+.||+.+.                ++
T Consensus       249 -----~~~~~~~--~~~~~~a~~~al~~Agi~~-~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~  320 (385)
T PRK12578        249 -----RRGEWVG--FKATQLAARQAYNMAKVTP-NDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKV  320 (385)
T ss_pred             -----ccccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence                 0011111  1123467889999999997 999 889998877777777889998762                12


Q ss_pred             HHHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410          333 WASR-YVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       333 ~~~~-~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      +.|. -=+--+||...|+-+..+.+++.+
T Consensus       321 pvN~~GG~la~GhP~gatG~~~v~e~~~q  349 (385)
T PRK12578        321 GVNLFGGLKAKGHPLGATGLSMIYEITKQ  349 (385)
T ss_pred             eeCCCCCcccCCCCccHHHHHHHHHHHHH
Confidence            2210 012247999988888888877764

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=99.58  E-value=4.6e-14  Score=140.67  Aligned_cols=95  Identities=16%  Similarity=0.120  Sum_probs=79.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|++++|+++|++++|||.||+++..+ ......+......+|++... ++++++.+|+|++.|+..|.++|+
T Consensus        30 ~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~-p~~~V~~aCaSG~~Av~~A~~~I~  108 (397)
T PRK06954         30 TAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSV-GCTTVNKMCGSGMRAAMFAHDMLV  108 (397)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCc-cEeeccccchHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999998776 33333444445556776533 289999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|.++.+||+++|++|.
T Consensus       109 sG~~d~vLv~G~E~ms~  125 (397)
T PRK06954        109 AGSVDVIVAGGMESMTN  125 (397)
T ss_pred             CCCCCEEEEEeeeccCC
Confidence            99999999999999883

>PRK06059 lipid-transfer protein; Provisional

Probab=99.57  E-value=1.5e-13  Score=137.42  Aligned_cols=274  Identities=17%  Similarity=0.112  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      ..+|+.+|+++||+++|++++|||.||++++.+  +..+..+..++..||+.+.+  .++++.+|++++.+|..|.++|+
T Consensus        23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~--~~~v~~~Casg~~al~~A~~~I~  100 (399)
T PRK06059         23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAP--VSSSYAACASGSQALQSARAQIL  100 (399)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCc--eecccchhHHHHHHHHHHHHHHH
Confidence            689999999999999999999999999887665  33345678999999997654  78899999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcccc-C--------C-------CCc---c------------------------------------
Q 044410          187 NNPGARVLVVCSDIRVLDF-H--------E-------PSE---T------------------------------------  211 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~~~-~--------~-------~~~---~------------------------------------  211 (402)
                      +|..++|||+++|.++..+ .        +       |..   .                                    
T Consensus       101 sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np  180 (399)
T PRK06059        101 AGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGATVEDFAQVKVKNARHGLLNP  180 (399)
T ss_pred             CCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCc
Confidence            9999999999999865310 0        0       000   0                                    


Q ss_pred             --------chh------------hhhhhhhhccCcEEEEEccCCCCCCC---CCCceEEEeeeeeecCCCcccccceeec
Q 044410          212 --------HLD------------VLVVQAVFGDGAGAAIIGADSDISNH---ESPLFQILSCTQTTVPDTENYISGQLKE  268 (402)
Q Consensus       212 --------~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~  268 (402)
                              +.+            ........+|||+|+||.+.+.....   ..+...+.+.+... +...  ..+. ..
T Consensus       181 ~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g~~~~~-~~~~--~~~~-~~  256 (399)
T PRK06059        181 NARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRAISTVT-PRYP--QHLP-EL  256 (399)
T ss_pred             HhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEEEEEec-cccc--cccc-cc
Confidence                    000            00122345799999999875431111   11223444332211 0000  0000 00


Q ss_pred             CceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc----c------------
Q 044410          269 MGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----K------------  331 (402)
Q Consensus       269 ~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----k------------  331 (402)
                      ..+........+.........+++++++++|+++ +|| .+=+|-.-....-...+.||+.+.    +            
T Consensus       257 ~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~-~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~  335 (399)
T PRK06059        257 PDIATDSTAAVPAPERVFKDQILDAAYAEAGIGP-EDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGR  335 (399)
T ss_pred             ccccccccccccccccHHHHHHHHHHHHHcCCCH-HHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCC
Confidence            0000000000011001123457788999999997 999 888887754444445689998753    1            


Q ss_pred             cHHH-HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcc---c-CCCCCceEEEEEEcccccceeeEEe
Q 044410          332 LWAS-RYVLREYGNMGAPSVFFILDEVRKKSIEEMKA---T-TGEGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       332 ~~~~-~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i---~-~G~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                      ++.| .-=+--+||...++-...+.+++.+.-  |+-   + +|  ..+.+....|.|...++++|+
T Consensus       336 ~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLr--g~ag~~Qv~~--a~~gl~~~~g~~g~~~~~~l~  398 (399)
T PRK06059        336 IPVNPSGGLACFGEAIPAQAIAQVCELTWQLR--GQAGGRQVEG--ARVGITANQGLFGHGSSVIVA  398 (399)
T ss_pred             eeecCCCccccCCccCCccHHHHHHHHHHHhc--cCcCCccCCC--ccEEEEeccCCcccceEEEec
Confidence            1211 001234799999988888888776521  210   0 13  145555444544455666654

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=99.57  E-value=2.1e-13  Score=135.46  Aligned_cols=257  Identities=19%  Similarity=0.164  Sum_probs=162.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD--MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~--~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|+++||+++|++++|||.+++++ ++ +.  .+..+..+++.||+.+.+  +++++.+|+++..++..|.++
T Consensus        23 s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~~~~--~~~v~~~casg~~al~~A~~~   99 (386)
T PRK08313         23 SMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGATGKP--LIRVHTAGSVGGSTAVVAASL   99 (386)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCCCCc--eEEEeccCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999886 34 21  123347899999998655  789999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCccc-----------cC------------------------------------------CC---
Q 044410          185 AENNPGARVLVVCSDIRVLD-----------FH------------------------------------------EP---  208 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~~-----------~~------------------------------------------~~---  208 (402)
                      |++|.+++||||++|+.+..           |.                                          +|   
T Consensus       100 I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~  179 (386)
T PRK08313        100 VQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAH  179 (386)
T ss_pred             HHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHh
Confidence            99999999999999976421           11                                          01   


Q ss_pred             -Cc--cchh------------hhhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccceeecCceE
Q 044410          209 -SE--THLD------------VLVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTY  272 (402)
Q Consensus       209 -~~--~~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~  272 (402)
                       ..  -+.+            .+.....++|||+|+||.+.+..... ..+...+.+.+...-|..     +.       
T Consensus       180 ~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~-----~~-------  247 (386)
T PRK08313        180 LHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLA-----FA-------  247 (386)
T ss_pred             cCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcc-----cc-------
Confidence             00  0000            11223456899999999875431100 122334444333211110     00       


Q ss_pred             EEeCCchhHHHHHhHHHHHHHhhccCCCC--CCcce-EEEEcCCCHHHHHHHHHHcCCCcc----------------ccH
Q 044410          273 CHLSRDVPVAIGNYVDKCLSNAMSPIGIS--DWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KLW  333 (402)
Q Consensus       273 ~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~~  333 (402)
                         .++.+.  .......++++++++|++  + +|| .+=+|-......-...+.||+.++                +++
T Consensus       248 ---~~~~~~--~~~~~~a~~~a~~~Agi~~p~-~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~p  321 (386)
T PRK08313        248 ---GRDQVN--PQAGRDAAAALWKAAGITDPR-DEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLP  321 (386)
T ss_pred             ---cccccc--cHHHHHHHHHHHHHcCCCCCh-hhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCcc
Confidence               011111  122346888999999997  5 888 888888766666677899999865                223


Q ss_pred             HH--HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcc---c-CCCCCceEEEEEEcccccceeeE
Q 044410          334 AS--RYVLREYGNMGAPSVFFILDEVRKKSIEEMKA---T-TGEGLECGVLFGFGPGLTVETVV  391 (402)
Q Consensus       334 ~~--~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i---~-~G~~~d~vll~~~G~G~~~~~~l  391 (402)
                      .|  =-.+.  ||-..++-+..+.++..+.-  |..   + ++  .++.+..+.|.+...+.++
T Consensus       322 vN~~GG~l~--g~p~gatG~~~~~e~~~qlr--G~ag~rQv~~--a~~~l~~~~Gg~~~~~~~~  379 (386)
T PRK08313        322 VNPSGGVLS--SNPIGASGMIRFAEAALQVM--GKAGEHQVDG--ARKALGHAYGGGSQFFSMW  379 (386)
T ss_pred             ccCCCcccc--cCCCcHHHHHHHHHHHHHhc--ccccCCcCCC--ccEEEEeccCCcceEEEEE
Confidence            22  00122  77666666777777666421  221   1 23  2566777776443444433

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=99.57  E-value=5.6e-14  Score=141.40  Aligned_cols=227  Identities=17%  Similarity=0.181  Sum_probs=148.4

Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCCccE----EEEEecCC-C-------------------CCCCHHHHHHHHcCCCCc
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSKITH----LIFSAFYG-V-------------------DMPGADVRLMRLLGLKPS  160 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~-~-------------------~~p~~a~~i~~~LGl~~~  160 (402)
                      ..+....|+.+|+++||+++|+++++++.    +++++..+ +                   ..+..+..++..+|+...
T Consensus        83 ~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g~  162 (421)
T cd00833          83 AMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGP  162 (421)
T ss_pred             hcCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCCC
Confidence            34556889999999999999999888774    66666432 1                   113467889999999763


Q ss_pred             cccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------------cCCCCccchhhhhhhhhhcc
Q 044410          161 VNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------------FHEPSETHLDVLVVQAVFGD  224 (402)
Q Consensus       161 ~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------------~~~~~~~~~~~~~~~~lfGD  224 (402)
                         .+.+..+|++++.||..|..+|++|..+.+||+++|.....                ...|.+..    ...+++||
T Consensus       163 ---~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~----~~g~~~ge  235 (421)
T cd00833         163 ---SLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDAD----ADGYVRGE  235 (421)
T ss_pred             ---ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCC----CCCeeeec
Confidence               68899999999999999999999999999999999975310                01222211    23678999


Q ss_pred             CcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCC
Q 044410          225 GAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDW  303 (402)
Q Consensus       225 GAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~  303 (402)
                      ||+|+||++.+.... .......+.+.+....              +...  ....+  ....+..+++++|+++|+++ 
T Consensus       236 GAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~--------------~~~~--~~~~p--~~~~~~~a~~~al~~Agi~~-  296 (421)
T cd00833         236 GVGVVVLKRLSDALRDGDRIYAVIRGSAVNQD--------------GRTK--GITAP--SGEAQAALIRRAYARAGVDP-  296 (421)
T ss_pred             eEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCC--------------CCCC--CCcCC--CHHHHHHHHHHHHHHhCCCH-
Confidence            999999997654111 0111223333221100              0000  00011  13455688999999999997 


Q ss_pred             cce-EEEEcCCCHHH-----HHHHHHHcCCCc---cccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410          304 NSL-FYVVHPGGDGL-----LDQVEKTLGLRK---EKLWASRYVLREYGNMGAPSVFFILDEVR  358 (402)
Q Consensus       304 ~di-~~i~H~~~~~~-----~~~~~~~lgi~~---ek~~~~~~~l~~~Gn~~sasi~i~L~~~~  358 (402)
                      +|| ++.+|-.+...     .+.+.+.++-..   ..++.+ ..-..+||+.+|+-++.|...+
T Consensus       297 ~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~-s~k~~~Gh~~~aag~~~l~~~~  359 (421)
T cd00833         297 SDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIG-SVKSNIGHLEAAAGLAGLIKVV  359 (421)
T ss_pred             HHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeee-cCcCccccchhhhHHHHHHHHH
Confidence            999 99999765433     334455554321   222221 1234689999998887765543

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.55  E-value=1.4e-13  Score=137.28  Aligned_cols=252  Identities=14%  Similarity=0.103  Sum_probs=161.1

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCC---CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMP---GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKD  183 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p---~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~  183 (402)
                      +..+|+.+|+++||+++|++++|||.++++++.+ ...|   .....+...++  ... ++++++.+|++++.++..|.+
T Consensus        31 ~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~-p~~~V~~~CaSg~~ai~~A~~  107 (394)
T PRK06445         31 RPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNI-PAMAVDRQCASSLTTVSIGAM  107 (394)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCC-cchhhhhhhHHHHHHHHHHHH
Confidence            4789999999999999999999999999998876 3223   22233444444  222 378999999999999999999


Q ss_pred             HHHcCCCCeEEEEEeccCccc-c-------C------CCC----cc-------------------chhhh--h-------
Q 044410          184 IAENNPGARVLVVCSDIRVLD-F-------H------EPS----ET-------------------HLDVL--V-------  217 (402)
Q Consensus       184 ~i~~g~~~~vLvv~~e~~s~~-~-------~------~~~----~~-------------------~~~~~--~-------  217 (402)
                      +|++|.+++|||++.|++|.. +       .      ++.    +.                   ++++.  +       
T Consensus       108 ~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~  187 (394)
T PRK06445        108 EIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQL  187 (394)
T ss_pred             HHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            999999999999999977631 0       0      000    00                   00000  0       


Q ss_pred             ---------------------------------------------h--------------hhhhccCcEEEEEccCCCCC
Q 044410          218 ---------------------------------------------V--------------QAVFGDGAGAAIIGADSDIS  238 (402)
Q Consensus       218 ---------------------------------------------~--------------~~lfGDGAaA~vL~~~~~~~  238 (402)
                                                                   .              .+..+|||+|+||++.+...
T Consensus       188 A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~  267 (394)
T PRK06445        188 AAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVK  267 (394)
T ss_pred             HHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHHHH
Confidence                                                         0              01113333333333222100


Q ss_pred             CC-CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHH
Q 044410          239 NH-ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDG  316 (402)
Q Consensus       239 ~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~  316 (402)
                      .. ..+..++.+.+..                     .. . +.........+++++|+++|+++ +|| ++=+|-....
T Consensus       268 ~~~~~~~a~i~g~~~~---------------------~~-~-~~~~~~~~~~a~~~al~~Agl~~-~dId~~e~~d~f~~  323 (394)
T PRK06445        268 KYGLKPMAKIRSFGFA---------------------GV-P-PAIMGKGPVPASKKALEKAGLSV-KDIDLWEINEAFAV  323 (394)
T ss_pred             HCCCCceEEEEEEEEe---------------------cc-C-CchhcchHHHHHHHHHHHcCCCH-HHcCEEEecccchH
Confidence            00 0001112111110                     00 0 11112234578899999999997 999 9999988777


Q ss_pred             HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          317 LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       317 ~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      ..-...+.||++++++..+ --.--+||...|+-...+.+++.+.    +++.+   .+.+....|.|..-.+++|+.
T Consensus       324 ~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL----~~~~~---~~gl~~~~~~gg~g~a~~~e~  393 (394)
T PRK06445        324 VVLYAIKELGLDPETVNIK-GGAIAIGHPLGATGARIVGTLARQL----QIKGK---DYGVATLCVGGGQGGAVVLER  393 (394)
T ss_pred             HHHHHHHHhCCCccccCCC-CCHHHcCCCccchHHHHHHHHHHHH----HhcCC---CEEEEEEcccCChhhEEEEEc
Confidence            7777789999998776543 2244589999999888888888761    12333   677777777777777888764

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.55  E-value=1.3e-13  Score=138.37  Aligned_cols=261  Identities=15%  Similarity=0.146  Sum_probs=166.7

Q ss_pred             HhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC----------------------C----CCC-CHHHHHHHH
Q 044410          106 IDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG----------------------V----DMP-GADVRLMRL  154 (402)
Q Consensus       106 ~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~----------------------~----~~p-~~a~~i~~~  154 (402)
                      .+....|+..|+++||+++|++++++|    .++++++..                      +    ..+ ..+.++...
T Consensus        69 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~  148 (411)
T PRK07314         69 MDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIR  148 (411)
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHH
Confidence            345678999999999999999998888    567665421                      1    111 256789999


Q ss_pred             cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----c----------------CCCCccch
Q 044410          155 LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F----------------HEPSETHL  213 (402)
Q Consensus       155 LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~----------------~~~~~~~~  213 (402)
                      +|+...   .+.+..+|++++.||..|..+|++|..+.|||+++|..+..     |                ..|.+.++
T Consensus       149 ~gl~Gp---~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~  225 (411)
T PRK07314        149 YGAKGP---NHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR  225 (411)
T ss_pred             hCCCCc---cccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC
Confidence            999764   57788999999999999999999999999999999864311     0                01222111


Q ss_pred             hhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410          214 DVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS  292 (402)
Q Consensus       214 ~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~  292 (402)
                          ..+++||||+|+||++.+.... .......+.+.+...              ++..+.. ...   .......+++
T Consensus       226 ----dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~--------------d~~~~~~-~~~---~~~~~~~a~~  283 (411)
T PRK07314        226 ----DGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTG--------------DAYHMTA-PAP---DGEGAARAMK  283 (411)
T ss_pred             ----CCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCCC-CCC---CcHHHHHHHH
Confidence                3578999999999987543110 011123444332210              0000000 000   0122346888


Q ss_pred             HhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410          293 NAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK  366 (402)
Q Consensus       293 ~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~  366 (402)
                      ++|+++|+++ +|| ++..|-.+...     .+.+.+.++....+++.+ ..-..+||+.+|+-.+.|...+.. +.+|.
T Consensus       284 ~Al~~agi~~-~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~i~~~l~-l~~~~  360 (411)
T PRK07314        284 LALKDAGINP-EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVS-STKSMTGHLLGAAGAVEAIFSVLA-IRDQV  360 (411)
T ss_pred             HHHHHcCCCH-HHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeE-CccchhchhHHHHHHHHHHHHHHH-HhCCC
Confidence            9999999997 999 99999766533     344556666544454432 123467999888766665443321 11133


Q ss_pred             ccC-----------------C----CCCceEEEEEEcccccceeeEEee
Q 044410          367 ATT-----------------G----EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       367 i~~-----------------G----~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +.|                 +    .+.++++.-+||-|.+-++++|+.
T Consensus       361 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~  409 (411)
T PRK07314        361 IPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR  409 (411)
T ss_pred             cCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence            221                 0    012568889999999999999875

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.55  E-value=1.9e-13  Score=137.56  Aligned_cols=259  Identities=17%  Similarity=0.163  Sum_probs=160.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCcc------------------EEEEEec---------------CC--------CCCCCH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKIT------------------HLIFSAF---------------YG--------VDMPGA  147 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId------------------~li~~s~---------------~~--------~~~p~~  147 (402)
                      ...|+..|+++||+++|++..+++                  .++.++.               .+        ...|..
T Consensus        75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (425)
T PRK06501         75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI  154 (425)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence            456889999999999998643322                  1122111               11        134568


Q ss_pred             HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecc---------------Cccc------cC
Q 044410          148 DVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI---------------RVLD------FH  206 (402)
Q Consensus       148 a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~---------------~s~~------~~  206 (402)
                      +.+|+..+|++..   .+++..+|++++.||..|.++|++|.++.+||+++|.               .+..      ..
T Consensus       155 a~~i~~~~gl~G~---~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~  231 (425)
T PRK06501        155 ADRLADRFGTRGL---PISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS  231 (425)
T ss_pred             HHHHHHHhCCCCC---ceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence            8999999999764   6889999999999999999999999999999999994               1210      01


Q ss_pred             CCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCC-CceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHH
Q 044410          207 EPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHES-PLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGN  285 (402)
Q Consensus       207 ~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~  285 (402)
                      .|.|.++    ..+++||||+|+||++.+....... ....+.+.+..    .+.          .+.  ....+  -..
T Consensus       232 rpfd~~r----~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~----~d~----------~~~--~~~~~--~~~  289 (425)
T PRK06501        232 KPFSKDR----DGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEK----ADS----------FHR--TRSSP--DGS  289 (425)
T ss_pred             CCCCCCC----CCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEc----cCC----------CCC--CCCCC--CHH
Confidence            1222222    3589999999999998654110001 11123222211    000          000  00000  023


Q ss_pred             hHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410          286 YVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       286 ~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~  359 (402)
                      .+.++++++|+++|+++ +|| ++.+|-.+....+.     +.+.++-...+++.+ ..-..+||+.+|+-.+.+...+.
T Consensus       290 ~~~~ai~~AL~~agi~p-~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~-s~k~~~Gh~~~AsG~~~~~~~~l  367 (425)
T PRK06501        290 PAIGAIRAALADAGLTP-EQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVS-SNKSMIGHTLTAAGAVEAVFSLL  367 (425)
T ss_pred             HHHHHHHHHHHHcCCCH-HHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEE-CCCcccCCCchhhhHHHHHHHHH
Confidence            46688999999999997 999 99999877655444     344555322233331 12346799998887766644322


Q ss_pred             hhhhhhcccC-----------------C----CCCceEEEEEEcccccceeeEEeee
Q 044410          360 KSIEEMKATT-----------------G----EGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       360 ~~~~~g~i~~-----------------G----~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      . +.+|.+.+                 .    .+.+.++.-+||-|.+-.+++|+..
T Consensus       368 ~-l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~  423 (425)
T PRK06501        368 T-IQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAE  423 (425)
T ss_pred             H-HhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecC
Confidence            1 11133221                 0    0124577888999999999998754

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.54  E-value=7.7e-13  Score=132.66  Aligned_cols=259  Identities=14%  Similarity=0.153  Sum_probs=166.0

Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C-------------------------CCC-CHHHHHHH
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V-------------------------DMP-GADVRLMR  153 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~-------------------------~~p-~~a~~i~~  153 (402)
                      ..+....++..|+++||+++|+++.+.+    .|+++++.. +                         .++ ..+.+|..
T Consensus        70 ~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~  149 (414)
T PRK08722         70 KMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSI  149 (414)
T ss_pred             hcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHH
Confidence            3345667899999999999999764433    456665421 0                         112 36788999


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c----------CCCCccc
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F----------HEPSETH  212 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~----------~~~~~~~  212 (402)
                      .+|++..   .+.+..+|++++.||..|..+|++|..+.+||+++|.....           +          ..|.|.+
T Consensus       150 ~~gl~Gp---~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~  226 (414)
T PRK08722        150 MRGLRGP---NIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKD  226 (414)
T ss_pred             HhCCCCC---ccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCC
Confidence            9999975   67899999999999999999999999999999999975321           0          0122222


Q ss_pred             hhhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410          213 LDVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL  291 (402)
Q Consensus       213 ~~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i  291 (402)
                      +    ..++.||||+++||++.+.... ......++.+.+..    +          ++.++. .+..   .......++
T Consensus       227 ~----~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~----~----------d~~~~~-~p~~---~~~~~~~a~  284 (414)
T PRK08722        227 R----DGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMS----G----------DAYHMT-SPSE---DGSGGALAM  284 (414)
T ss_pred             C----CceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEc----C----------CCCCCC-CCCc---chHHHHHHH
Confidence            2    4678999999999997654111 01112234332211    0          110000 0110   112345678


Q ss_pred             HHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCC-ccccHHHHHHHHhcCCCCcchHHHHHHHH---HHhh
Q 044410          292 SNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLR-KEKLWASRYVLREYGNMGAPSVFFILDEV---RKKS  361 (402)
Q Consensus       292 ~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~-~ek~~~~~~~l~~~Gn~~sasi~i~L~~~---~~~~  361 (402)
                      +++|+++|+++ +|| ++-.|-.+..     -.+.+.+.+|-. .++++.+ .+-..+||+.+|+-.+.|...   +++ 
T Consensus       285 ~~Al~~agi~~-~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~l~~-  361 (414)
T PRK08722        285 EAAMRDAGVTG-EQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVS-STKSMTGHLLGAAGSVEAIITVMSLVD-  361 (414)
T ss_pred             HHHHHHcCCCH-HHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceee-CcccccccchHHHHHHHHHHHHHHHhc-
Confidence            89999999997 999 9999976543     344566677632 2334432 134578999998877666433   222 


Q ss_pred             hhhhcccC-----------------C-----CCCceEEEEEEcccccceeeEEee
Q 044410          362 IEEMKATT-----------------G-----EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       362 ~~~g~i~~-----------------G-----~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                         |.+.|                 .     .+..+++.-+||-|.+-++++|+.
T Consensus       362 ---~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~  413 (414)
T PRK08722        362 ---QIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK  413 (414)
T ss_pred             ---CccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence               22211                 0     012567888999999999988863

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=99.53  E-value=2.6e-13  Score=134.83  Aligned_cols=94  Identities=16%  Similarity=0.102  Sum_probs=83.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-C-CCCCHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-V-DMPGADVRLMRLLGLKP-SVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~-~~p~~a~~i~~~LGl~~-~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|+++||+++|+.++|||.++++++.+ . ..+..+.+++..+|++. .+  ++.++++|+|++.|+..|..+
T Consensus        26 ~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p--~~~V~~aCaSG~~Al~~A~~~  103 (391)
T PRK07661         26 RPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVP--AITINRYCSSGLQSIAYGAER  103 (391)
T ss_pred             CHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcc--eeehhhhhhHHHHHHHHHHHH
Confidence            3789999999999999998889999999998776 2 24677788999999985 43  889999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |++|..+.+||+++|++|.
T Consensus       104 I~sG~~d~vLv~G~E~ms~  122 (391)
T PRK07661        104 IMLGHSEAVIAGGAESMSL  122 (391)
T ss_pred             HHcCCCCEEEEEEEeeccc
Confidence            9999999999999998863

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=99.53  E-value=1.9e-12  Score=132.97  Aligned_cols=261  Identities=15%  Similarity=0.149  Sum_probs=164.5

Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCC---cc----EEEEEecCC---------------------CCCC-----CHHHHH
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSK---IT----HLIFSAFYG---------------------VDMP-----GADVRL  151 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~d---Id----~li~~s~~~---------------------~~~p-----~~a~~i  151 (402)
                      ..+....++..|+++||+++|++++.   ++    .|++++..+                     +..|     ..+.+|
T Consensus       195 ~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i  274 (540)
T PLN02787        195 RMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAML  274 (540)
T ss_pred             hCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHH
Confidence            33445679999999999999997542   21    466666531                     0011     235688


Q ss_pred             HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c----------CCCCc
Q 044410          152 MRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F----------HEPSE  210 (402)
Q Consensus       152 ~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~----------~~~~~  210 (402)
                      +..+|+...   .+.+..+|++++.||..|.++|++|..+.+||.++|.....           +          ..|.|
T Consensus       275 a~~~gl~Gp---~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD  351 (540)
T PLN02787        275 AMDLGWMGP---NYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWD  351 (540)
T ss_pred             HHHhCCCCC---ccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcc
Confidence            999999875   57899999999999999999999999999999999963110           0          12333


Q ss_pred             cchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHH
Q 044410          211 THLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDK  289 (402)
Q Consensus       211 ~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~  289 (402)
                      .++    ..+++|+||+++||++.+... .......++.+.+..              .+++++..    +.--...+..
T Consensus       352 ~~r----dGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s--------------~Da~~~t~----p~p~g~g~~~  409 (540)
T PLN02787        352 MNR----DGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFT--------------CDAYHMTE----PHPEGAGVIL  409 (540)
T ss_pred             cCC----CCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEe--------------cCCCCCCC----CCcCHHHHHH
Confidence            222    478999999999999754411 101112234433211              11111110    0001233557


Q ss_pred             HHHHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhh
Q 044410          290 CLSNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIE  363 (402)
Q Consensus       290 ~i~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~  363 (402)
                      +|+++|+++|+++ +|| |+..|-.+..     -...+.+.+|-.+ .++.+ .+-..+||+.+|+-.+.+...+.. +.
T Consensus       410 am~~AL~~AGl~p-~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~pV~-S~Ks~iGH~~gAAGa~eli~~~la-l~  485 (540)
T PLN02787        410 CIEKALAQSGVSK-EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELRVN-STKSMIGHLLGAAGAVEAIATVQA-IR  485 (540)
T ss_pred             HHHHHHHHcCCCH-HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cceee-CCCCCcCCCcccchHHHHHHHHHH-Hh
Confidence            8899999999997 999 9999976544     3455667777422 23322 134578999988866655443321 00


Q ss_pred             hhcccCC------------------C----CCceEEEEEEcccccceeeEEee
Q 044410          364 EMKATTG------------------E----GLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       364 ~g~i~~G------------------~----~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +|.+.|-                  .    +.+.+|.-+||-|..-++++|+.
T Consensus       486 ~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~  538 (540)
T PLN02787        486 TGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP  538 (540)
T ss_pred             cCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence            1332210                  0    11456778999999888998874

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=99.52  E-value=1.2e-12  Score=130.05  Aligned_cols=95  Identities=8%  Similarity=-0.032  Sum_probs=82.4

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ++.+|+.+|++++|+++|++++|||.+++++... .. ....+..+...+|++... +++.++++|+|++.|+..|.+.|
T Consensus        25 ~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~-p~~tV~~~CaSG~~A~~~A~~~I  103 (387)
T PRK07850         25 HAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV-GATTIDCQCGSAQQANHLVAGLI  103 (387)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC-ceEEEecccccHHHHHHHHHHHH
Confidence            3789999999999999999999999999987654 22 244566777889998533 28899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|..+.+|+++.|++|.
T Consensus       104 ~sG~~dvvla~G~E~mS~  121 (387)
T PRK07850        104 AAGAIDVGIACGVEAMSR  121 (387)
T ss_pred             HCCCCCEEEEEeEecCCC
Confidence            999999999999999874

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=99.51  E-value=3.8e-13  Score=134.43  Aligned_cols=94  Identities=12%  Similarity=0.022  Sum_probs=81.5

Q ss_pred             hHHHHHHHHHHHHHHHc-CCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEW-GQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|+++||+++ |++++|||.+++++..+  ...+..+..++..+|+.+.+  ++.++.+|+++..++..|.++
T Consensus        26 ~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p--~~~v~~~caSG~~av~~Aa~~  103 (406)
T PRK07851         26 RPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLP--GTTVNRYCSSSLQTTRMAFHA  103 (406)
T ss_pred             CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCC--eeeeeccchhHHHHHHHHHHH
Confidence            47899999999999997 99999999999876544  22356678899999997543  788999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |++|.++.|||+++|++|.
T Consensus       104 I~sG~~d~vLv~G~e~~s~  122 (406)
T PRK07851        104 IKAGEGDVFISAGVETVSR  122 (406)
T ss_pred             HHCCCCCEEEEeeEEeccc
Confidence            9999999999999998653

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=99.51  E-value=7.3e-13  Score=131.27  Aligned_cols=95  Identities=12%  Similarity=0.007  Sum_probs=87.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ++.+|+..+++.+|+++++++++||.||+++..+ -. .+.++.+.+-..|++..+. ++.++..|+|++.|+.+|.+.|
T Consensus        28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp-~~tvnr~C~Sgl~ai~~aa~~I  106 (417)
T PRK06025         28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKAS-GVTLDRFCGGGITSVNLAAAQI  106 (417)
T ss_pred             CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCC-eeeeccccchHHHHHHHHHHHH
Confidence            3889999999999999999999999999999877 32 4789999999999998764 9999999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|..+.+|+.+.|.+|.
T Consensus       107 ~~G~~~~~laGG~EsmS~  124 (417)
T PRK06025        107 MSGMEDLVIAGGTEMMSY  124 (417)
T ss_pred             HcCCCCEEEEeeeeccCC
Confidence            999999999999999984

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.50  E-value=1e-12  Score=132.59  Aligned_cols=263  Identities=15%  Similarity=0.147  Sum_probs=165.7

Q ss_pred             HHHHhhHHHHHHHHHHHHHHHcCCCCCCc-c----EEEEEecCC----------------------CCCC-----CHHHH
Q 044410          103 AMLIDEVPKLGKEAALKAIKEWGQPVSKI-T----HLIFSAFYG----------------------VDMP-----GADVR  150 (402)
Q Consensus       103 ~~~~~~~~~la~~Aa~~aL~~ag~~~~dI-d----~li~~s~~~----------------------~~~p-----~~a~~  150 (402)
                      .+..+....|+..|+++||+++|++++++ +    .|+++++..                      +..+     ..+.+
T Consensus        76 ~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  155 (424)
T PRK06333         76 QRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGH  155 (424)
T ss_pred             HhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHH
Confidence            33445567899999999999999987766 2    566665421                      1111     24678


Q ss_pred             HHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----------CCC
Q 044410          151 LMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEP  208 (402)
Q Consensus       151 i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----------~~~  208 (402)
                      |+..+|+...   .+.+..+|++++.||..|..+|++|.++.+||+++|.....           +           .+|
T Consensus       156 is~~~gl~Gp---~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~P  232 (424)
T PRK06333        156 VSIRYGFKGP---LGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRP  232 (424)
T ss_pred             HHHHhCCCCC---CccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCC
Confidence            9999999764   67889999999999999999999999999999999973210           0           112


Q ss_pred             CccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhH
Q 044410          209 SETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYV  287 (402)
Q Consensus       209 ~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~  287 (402)
                      .+.++    ..++.||||+++||++.+... .......++.+.+...              ++.++.. +. +  -....
T Consensus       233 fd~~~----~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~--------------d~~~~~~-~~-~--~~~~~  290 (424)
T PRK06333        233 FDRDR----DGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSA--------------DAYHMTA-GP-E--DGEGA  290 (424)
T ss_pred             CCCCC----CCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCCC-CC-C--CcHHH
Confidence            22222    357899999999999754311 1011122343332210              1100000 00 0  12345


Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhh
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKS  361 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~  361 (402)
                      .++++++|+++|+++ +|| ++..|-.+..     -...+.+.++- ...++.+ .....+||+.+|+-.+.+...+.. 
T Consensus       291 ~~a~~~Al~~Agi~p-~dId~i~~hgtgt~~~D~~E~~al~~~fg~-~~~~~v~-s~K~~~GH~~gAaG~~~~~~~~l~-  366 (424)
T PRK06333        291 RRAMLIALRQAGIPP-EEVQHLNAHATSTPVGDLGEVAAIKKVFGH-VSGLAVS-STKSATGHLLGAAGGVEAIFTILA-  366 (424)
T ss_pred             HHHHHHHHHHcCCCH-HHCCEEeccCCCCccchHHHHHHHHHHhCC-CCCceeE-CcccchhhhHHHHHHHHHHHHHHH-
Confidence            678899999999997 999 9999976644     34556677772 2233332 135678999888765554433221 


Q ss_pred             hhhhcccC------------------C----CCCceEEEEEEcccccceeeEEee
Q 044410          362 IEEMKATT------------------G----EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       362 ~~~g~i~~------------------G----~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +.+|.+.|                  +    .+.++++..+||.|.+..+++|+.
T Consensus       367 l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~  421 (424)
T PRK06333        367 LRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR  421 (424)
T ss_pred             HhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence            11122111                  0    011567888999999988888874

>PLN02287 3-ketoacyl-CoA thiolase

Probab=99.48  E-value=2.1e-12  Score=130.16  Aligned_cols=95  Identities=7%  Similarity=-0.031  Sum_probs=81.7

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCC-HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPG-ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~-~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|+++||+++|++++|||.||+++..+ ...+. .+..++..+|++... +++.++.+|+++..++..|...|
T Consensus        70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~-pa~~V~~~CaSG~~Ai~~Aa~~I  148 (452)
T PLN02287         70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI  148 (452)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCc-ceEEEeccCchHHHHHHHHHHHH
Confidence            4789999999999999999999999999988766 44343 445677788998633 27899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|.++.|||++.|++|.
T Consensus       149 ~sG~~dvvLv~GvE~mS~  166 (452)
T PLN02287        149 KAGFYDIGIGAGVESMTT  166 (452)
T ss_pred             HcCCCCeEEEEeEEecCC
Confidence            999999999999998763

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=99.48  E-value=1.9e-12  Score=128.97  Aligned_cols=94  Identities=16%  Similarity=0.103  Sum_probs=79.6

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|++++|+++|++++|||.|++++... ...+..+..++..+|++.... +..++.+|+++..++..|.+.|+
T Consensus        24 ~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p-~~~v~~~caSg~~av~~Aa~~I~  102 (394)
T PLN02644         24 SATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTI-CTTVNKVCASGMKAVMLAAQSIQ  102 (394)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCc-eEEEeccchHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999876543 223345567889999975332 67789999999999999999999


Q ss_pred             cCCCCeEEEEEeccCc
Q 044410          187 NNPGARVLVVCSDIRV  202 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s  202 (402)
                      +|.++.|||++.|.+|
T Consensus       103 sG~~d~vlv~G~E~~s  118 (394)
T PLN02644        103 LGINDVVVAGGMESMS  118 (394)
T ss_pred             cCCCCEEEEEeEEecC
Confidence            9999999999988775

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.48  E-value=1.3e-12  Score=129.48  Aligned_cols=95  Identities=12%  Similarity=0.068  Sum_probs=83.7

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      ++.+|+..|++++|+++|+++++||.|++++..+ ......+.+++..+|++... +++.++.+|++++.|+..|.++|+
T Consensus        26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~-p~~~V~~~CaSG~~Ai~~A~~~I~  104 (392)
T PRK06633         26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEV-PGYTINKVCGSGLKSVALAANSIM  104 (392)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCc-cchhhcchhHHHHHHHHHHHHHHH
Confidence            4889999999999999999999999999998765 33346677788999998533 288999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|..+.+|+++.|++|.
T Consensus       105 sG~~dvvla~G~E~ms~  121 (392)
T PRK06633        105 TGDNEIVIAGGQENMSL  121 (392)
T ss_pred             cCCCCEEEEcccccCCC
Confidence            99999999999999874

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=99.48  E-value=8.5e-12  Score=123.96  Aligned_cols=234  Identities=17%  Similarity=0.045  Sum_probs=149.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-V-DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~-~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|+++||+++|++++|||.+++++... + ..+..+..+++.||+.+.+  ++.++++|+++..+|..|.++|
T Consensus        28 ~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~--~~~V~~~gasG~~al~~A~~~I  105 (392)
T PRK06065         28 TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKP--VSRVYVGGATGVMTAIAGWYHV  105 (392)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCC--eEEEecCchhHHHHHHHHHHHH
Confidence            3789999999999999999999999999875322 2 2456788899999997654  7889999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCccc---------------cCC------------------------------------------C
Q 044410          186 ENNPGARVLVVCSDIRVLD---------------FHE------------------------------------------P  208 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~~---------------~~~------------------------------------------~  208 (402)
                      ++|..++||||++|+++..               |..                                          |
T Consensus       106 ~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP  185 (392)
T PRK06065        106 ASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNP  185 (392)
T ss_pred             hCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCc
Confidence            9999999999999984210               100                                          1


Q ss_pred             Ccc-----chh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCce
Q 044410          209 SET-----HLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGT  271 (402)
Q Consensus       209 ~~~-----~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~  271 (402)
                      .-.     +.+            .+..+...+|||+|+||.+.+...........+.+.+...-+..     +..     
T Consensus       186 ~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v~I~g~~~~~~~~~-----~~~-----  255 (392)
T PRK06065        186 YAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTPVWVEGVGWTLDNTE-----WPN-----  255 (392)
T ss_pred             hhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCccc-----ccc-----
Confidence            000     000            11223456899999999875431110011223443332211110     000     


Q ss_pred             EEEeCCchhHHHHHhHHHHHHHhhccCCCCC-Ccce-EEEEcCCCHHHHHHHHHHcCCCcc----------------ccH
Q 044410          272 YCHLSRDVPVAIGNYVDKCLSNAMSPIGISD-WNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KLW  333 (402)
Q Consensus       272 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~-~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~~  333 (402)
                           ++..  .........+++++++|+++ .+|+ .+=+|-.-..+.-...+.||+.+.                +++
T Consensus       256 -----~~~~--~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~p  328 (392)
T PRK06065        256 -----RDLA--YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIP  328 (392)
T ss_pred             -----cccc--ccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCee
Confidence                 0000  11122357788999999973 2778 777887755555556688886542                111


Q ss_pred             HHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410          334 ASR-YVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       334 ~~~-~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      .|. --+-.+||...++-+..+.++.++
T Consensus       329 vN~~GG~la~Ghp~gatG~~~~~e~~~Q  356 (392)
T PRK06065        329 SSPSGGLLGVGNPIAAAGLMKVISIYWQ  356 (392)
T ss_pred             ecCCCccccCCCCccHHHHHHHHHHHHH
Confidence            110 001237999988888888887765

>PRK06158 thiolase; Provisional

Probab=99.47  E-value=3.3e-12  Score=126.89  Aligned_cols=228  Identities=15%  Similarity=0.096  Sum_probs=145.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN  188 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g  188 (402)
                      ..+|+.+|+++||+++|++++|||.+++++.. ...|.  ..+++.||+++.+  ..++..+|+++..+|..|.++|++|
T Consensus        28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~~~~--~~~~~~g~~s~~~al~~A~~~I~sG  102 (384)
T PRK06158         28 AMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIRPRF--VDGTMIGGSSFLAHLLPAALALEAG  102 (384)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCCCee--eccccCccHHHHHHHHHHHHHHHcC
Confidence            78999999999999999999999999987642 23343  5799999998764  6788999999999999999999999


Q ss_pred             CCCeEEEE-EeccCcc-----c------cC-------------------------------------------CCCc---
Q 044410          189 PGARVLVV-CSDIRVL-----D------FH-------------------------------------------EPSE---  210 (402)
Q Consensus       189 ~~~~vLvv-~~e~~s~-----~------~~-------------------------------------------~~~~---  210 (402)
                      .+++|||+ +.++.+.     .      |.                                           +|.-   
T Consensus       103 ~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~~  182 (384)
T PRK06158        103 LCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFMR  182 (384)
T ss_pred             CCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhhhC
Confidence            99999998 4443321     0      10                                           0100   


Q ss_pred             --cchh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeC
Q 044410          211 --THLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLS  276 (402)
Q Consensus       211 --~~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~  276 (402)
                        -+.+            .+...+..+|||+|+||.+.+...........+.+.+......     .+.         ..
T Consensus       183 ~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~v~i~g~~~~~~~~-----~~~---------~~  248 (384)
T PRK06158        183 DPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPVYVLGAAAATWHR-----QIS---------SM  248 (384)
T ss_pred             CCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCCCcEEEEEEEEecCCc-----ccc---------cc
Confidence              0000            1123446899999999987653111101123333332211000     000         00


Q ss_pred             CchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc----------------ccHHH-HHH
Q 044410          277 RDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE----------------KLWAS-RYV  338 (402)
Q Consensus       277 ~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e----------------k~~~~-~~~  338 (402)
                      .++.   ......+++++++++|+++ +|| ++=+|-.-...--...+.||+.+.                +++.| --=
T Consensus       249 ~~~~---~~~~~~aa~~A~~~AGi~p-~DId~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sGG  324 (384)
T PRK06158        249 PDLT---VTAAAESGPRAFAMAGLTP-ADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNGG  324 (384)
T ss_pred             cchh---hhHHHHHHHHHHHHcCCCH-HHCcEEEecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCCh
Confidence            1111   1223468889999999997 999 888888766666667799998754                12221 000


Q ss_pred             HHhcCCCCcchHHHHHHHHHHh
Q 044410          339 LREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       339 l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      +-.+||. .++-+..+.++..+
T Consensus       325 ~ls~Ghp-gatG~~~~~E~~~Q  345 (384)
T PRK06158        325 GLSCVHP-GMYGLFLLIEAVRQ  345 (384)
T ss_pred             hhcCCCC-chhhHHHHHHHHHH
Confidence            2236888 45556666666554

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.47  E-value=1.5e-12  Score=129.66  Aligned_cols=94  Identities=14%  Similarity=0.106  Sum_probs=82.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHH-HHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADV-RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~-~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      .+.+|+.+|+++||++++++++|||.||+++..+ +..+..+. .+++.+|+...+  +++++.+|+|++.++..|..+|
T Consensus        22 ~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p--~~~V~~~Casg~~al~~A~~~I   99 (393)
T cd00826          22 LAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP--AIGMNNLCGSGLRALALAMQLI   99 (393)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCc--EEEecchhHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998877 44455555 367888887655  8999999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|..+.+||+++|++|.
T Consensus       100 ~sG~~~~vlv~g~e~~s~  117 (393)
T cd00826         100 AGGDANCILAGGFEKMET  117 (393)
T ss_pred             HCCCCCEEEEEeeecccc
Confidence            999999999999999863

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=99.46  E-value=1.4e-12  Score=130.77  Aligned_cols=256  Identities=12%  Similarity=0.099  Sum_probs=159.6

Q ss_pred             hHHHHHHHHHHHHHHHcCCC---CCCccEEEEEecC---------------C-CC--------CC-CHHHHHHHHcCCCC
Q 044410          108 EVPKLGKEAALKAIKEWGQP---VSKITHLIFSAFY---------------G-VD--------MP-GADVRLMRLLGLKP  159 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~---~~dId~li~~s~~---------------~-~~--------~p-~~a~~i~~~LGl~~  159 (402)
                      ....|+..|+++||+++|++   +++|+.++.++..               + +.        ++ ..+.+|+..||+..
T Consensus        79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G  158 (410)
T PRK07103         79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG  158 (410)
T ss_pred             HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC
Confidence            46789999999999999986   4566655543320               1 11        11 25678889999976


Q ss_pred             ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC-cc----------------------ccCCCCccchhhh
Q 044410          160 SVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VL----------------------DFHEPSETHLDVL  216 (402)
Q Consensus       160 ~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~----------------------~~~~~~~~~~~~~  216 (402)
                      .   .+.+..+|++++.||..|.++|++|..+.+||+++|.. +.                      ....|.|.++   
T Consensus       159 ~---~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~---  232 (410)
T PRK07103        159 E---GFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR---  232 (410)
T ss_pred             C---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC---
Confidence            4   57799999999999999999999999999999988631 10                      0011333222   


Q ss_pred             hhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhh
Q 044410          217 VVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAM  295 (402)
Q Consensus       217 ~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L  295 (402)
                       ..+++||||+++||++.+... .......++.+.+...              ++.+.. .+.     .....++++++|
T Consensus       233 -dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~--------------d~~~~~-~p~-----~~~~~~a~~~Al  291 (410)
T PRK07103        233 -DGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRL--------------DANRGP-DPS-----LEGEMRVIRAAL  291 (410)
T ss_pred             -CCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEec--------------CCCCCC-CCC-----HHHHHHHHHHHH
Confidence             368999999999999765411 0001123444433211              010000 011     122457888999


Q ss_pred             ccCCCCCCcce-EEEEcCCCHHHHHHHH-HH-cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccC---
Q 044410          296 SPIGISDWNSL-FYVVHPGGDGLLDQVE-KT-LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT---  369 (402)
Q Consensus       296 ~~~gl~~~~di-~~i~H~~~~~~~~~~~-~~-lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~---  369 (402)
                      +++|+++ +|| ++..|-.+....+.++ +. ++.....++.+ .+-..+||+.+|+-.+.|...+.. +.+|.+.|   
T Consensus       292 ~~Agi~~-~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~l~-l~~~~ipp~~~  368 (410)
T PRK07103        292 RRAGLGP-EDIDYVNPHGTGSPLGDETELAALFASGLAHAWIN-ATKSLTGHGLSAAGIVELIATLLQ-MRAGFLHPSRN  368 (410)
T ss_pred             HHcCCCH-HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEE-CCCcccccCchhhhHHHHHHHHHH-HhCCeeCCCCC
Confidence            9999997 999 9999987665433321 11 22222223322 123467999999888877654321 11132211   


Q ss_pred             -------------C----CCCceEEEEEEcccccceeeEEe
Q 044410          370 -------------G----EGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       370 -------------G----~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                                   .    ....+++..+||.|.+-.+++|+
T Consensus       369 ~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~  409 (410)
T PRK07103        369 LDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE  409 (410)
T ss_pred             CCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence                         0    01257788899999999999886

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=99.46  E-value=2.9e-12  Score=125.64  Aligned_cols=222  Identities=15%  Similarity=0.197  Sum_probs=145.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN  188 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g  188 (402)
                      +.+|+..|++++++  |++ ++||.|++++..+. ....+..+...+|++... +.+.++.+|++++.++..|.++|++|
T Consensus        25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~-p~~tV~~~CaSG~~Ai~~a~~~I~sG   99 (361)
T PRK06690         25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHI-PGVTIDRQCGAGLEAIRTACHFIQGG   99 (361)
T ss_pred             HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCC-CceehhhhhhHHHHHHHHHHHHHHCC
Confidence            78999999999865  886 89999999987542 244555688999998333 28899999999999999999999999


Q ss_pred             CCCeEEEEEeccCccc-cC-CC-------Ccc---------------chhh-----------------------------
Q 044410          189 PGARVLVVCSDIRVLD-FH-EP-------SET---------------HLDV-----------------------------  215 (402)
Q Consensus       189 ~~~~vLvv~~e~~s~~-~~-~~-------~~~---------------~~~~-----------------------------  215 (402)
                      ..+.+|+++.|.+|.. +. ..       .+.               ++++                             
T Consensus       100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~  179 (361)
T PRK06690        100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN  179 (361)
T ss_pred             CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence            9999999999998741 10 00       000               0000                             


Q ss_pred             ------h-h--------h--hhh--------------hccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCccccc
Q 044410          216 ------L-V--------V--QAV--------------FGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYIS  263 (402)
Q Consensus       216 ------~-~--------~--~~l--------------fGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~  263 (402)
                            . .        .  ..+              .+|||+|+||.+.+..... ..+..++.+.+...         
T Consensus       180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~---------  250 (361)
T PRK06690        180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVG---------  250 (361)
T ss_pred             CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEec---------
Confidence                  0 0        0  011              2566666666554320000 01122233221110         


Q ss_pred             ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHH---HHHH
Q 044410          264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWAS---RYVL  339 (402)
Q Consensus       264 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~---~~~l  339 (402)
                                 .....+   ......+++++|+++|+++ +|| +|.+|+..........+.||++++++..+   ....
T Consensus       251 -----------~~~~~~---~~~~~~a~~~al~~Agl~~-~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~G  315 (361)
T PRK06690        251 -----------VDPNLP---GTGPIFAVNKLLNEMNMKV-EDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALG  315 (361)
T ss_pred             -----------cCcccc---hhHHHHHHHHHHHHcCCCH-HHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhcc
Confidence                       001111   1234568889999999997 999 99999999999999999999998766541   0013


Q ss_pred             HhcCCCCcchHHHHHHHHHH
Q 044410          340 REYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       340 ~~~Gn~~sasi~i~L~~~~~  359 (402)
                      +.+|++|...++..+.++.+
T Consensus       316 hp~GatG~~~~~~~~~ql~~  335 (361)
T PRK06690        316 HPYGASGAMLVTRLFYQAKR  335 (361)
T ss_pred             CchhhhHHHHHHHHHHHHHH
Confidence            45677777776666666544

>PRK08256 lipid-transfer protein; Provisional

Probab=99.46  E-value=5.3e-12  Score=125.89  Aligned_cols=260  Identities=15%  Similarity=0.106  Sum_probs=162.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      +..+|+.+|+++||+++|++++|||.+++++..+....  ...++..+|+...+  .+.++.+|++++.+|..|.++|++
T Consensus        21 ~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~~~~--~~~v~~~caSg~~ai~~A~~~I~s   96 (391)
T PRK08256         21 DYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMTGIP--IVNVNNNCSTGSTALFLARQAVRS   96 (391)
T ss_pred             CHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCCCCC--CcccccccHHHHHHHHHHHHHHHC
Confidence            37899999999999999999999999988776552221  23467789997644  678999999999999999999999


Q ss_pred             CCCCeEEEEEeccCccc-c---------------------CCCC-c---c------------------------------
Q 044410          188 NPGARVLVVCSDIRVLD-F---------------------HEPS-E---T------------------------------  211 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~~-~---------------------~~~~-~---~------------------------------  211 (402)
                      |..++|||+++|+++.. +                     ..+. .   .                              
T Consensus        97 G~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~  176 (391)
T PRK08256         97 GAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARR  176 (391)
T ss_pred             CCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            99999999999987520 0                     0000 0   0                              


Q ss_pred             --------------chh------------hhhhhhhhccCcEEEEEccCCCCCCC-CCCceEEEeeeeeecCCCcccccc
Q 044410          212 --------------HLD------------VLVVQAVFGDGAGAAIIGADSDISNH-ESPLFQILSCTQTTVPDTENYISG  264 (402)
Q Consensus       212 --------------~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~  264 (402)
                                    +.+            ........+|||+|+||.+.+..... ..+..++.+.+.......  .+  
T Consensus       177 ~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~--~~--  252 (391)
T PRK08256        177 HAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPS--TF--  252 (391)
T ss_pred             hhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccc--cc--
Confidence                          000            00112234788888888765431110 012234443222110000  00  


Q ss_pred             eeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-------------
Q 044410          265 QLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-------------  330 (402)
Q Consensus       265 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-------------  330 (402)
                      . ..+.      ....  ........++++++++|+++ +|| .+-+|..-....-...+.||+.++             
T Consensus       253 ~-~~~~------~~~~--~~~~~~~a~~~a~~~ag~~~-~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~  322 (391)
T PRK08256        253 D-GRSM------IDLV--GYDMTRAAAQQVYEQAGIGP-EDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNT  322 (391)
T ss_pred             c-cccc------cccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCcc
Confidence            0 0000      0000  01123367889999999997 999 999999887777788899999876             


Q ss_pred             -----ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh-hc--ccCCCCCceEEEEEEccccccee
Q 044410          331 -----KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE-MK--ATTGEGLECGVLFGFGPGLTVET  389 (402)
Q Consensus       331 -----k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~-g~--i~~G~~~d~vll~~~G~G~~~~~  389 (402)
                           .+..+ -=.-.+||...|+-+..+.++..+...+ |.  ++..   ...+..+.|.|.+.-.
T Consensus       323 ~~G~~pvN~~-GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~---~~~l~~~~G~~~~~~~  385 (391)
T PRK08256        323 YGGRWVVNPS-GGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGA---RLALQHNLGLGGACVV  385 (391)
T ss_pred             CCCCeeeCCC-CccccCCCCccHHHHHHHHHHHHHhcCCcCCCcCCcc---ceEEEeccccceeEEE
Confidence                 22221 0012379999888888888877652210 11  2222   5677777775544433

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.45  E-value=6.6e-12  Score=126.37  Aligned_cols=95  Identities=11%  Similarity=0.066  Sum_probs=83.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|++++|+++|+++++||.+++++..+ ...+.++..++..+|++... +++.++.+|++++.|+..|.+.|+
T Consensus        28 ~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~-P~~tV~~aCaSG~~Ai~~Aa~~I~  106 (428)
T PRK08963         28 PAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT-DAYSVSRACATSFQAVANVAESIM  106 (428)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCC-cceeehhhhHHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999998765 33355677789999998432 288999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|.++.||+++.|++|.
T Consensus       107 sG~~dvvLvgG~Esms~  123 (428)
T PRK08963        107 AGTIDIGIAGGADSSSV  123 (428)
T ss_pred             CCCCCEEEEecccccCC
Confidence            99999999999999874

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=99.45  E-value=4.2e-12  Score=126.34  Aligned_cols=95  Identities=14%  Similarity=0.077  Sum_probs=85.2

Q ss_pred             hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      ++.+|+..|++++|++ +|+++++||.||+++..+  ...+..+.++...+|++.... ++.++++|+|++.|+.+|.+.
T Consensus        25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp-~~tV~~~CaSG~~Av~~A~~~  103 (400)
T PRK13359         25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVP-GSTINRLCGSGMDAVGVAARA  103 (400)
T ss_pred             CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc-eEEEeccchhHHHHHHHHHHH
Confidence            3789999999999996 599999999999998875  224778899999999997443 899999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |++|..+.+|+++.|++|.
T Consensus       104 I~sG~~divlagGvEsmS~  122 (400)
T PRK13359        104 IKSGEAALMIAGGVESMSR  122 (400)
T ss_pred             HHcCCCCEEEEeeeeccCC
Confidence            9999999999999999985

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.44  E-value=1.5e-11  Score=123.45  Aligned_cols=334  Identities=13%  Similarity=0.115  Sum_probs=192.9

Q ss_pred             cccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCcc
Q 044410           13 MTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCC   92 (402)
Q Consensus        13 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~   92 (402)
                      |.|.+...++ |.|+|+|...|--. +.+++.+.+..  .......+   ..+.....++..+.-....+.      +  
T Consensus         4 ~~~~~~~~~~-VvItGig~~sp~g~-~~~~~w~~L~~--G~s~i~~~---~~~~~~~~~~~~~~~g~i~~~------~--   68 (418)
T PRK07910          4 ELTTGKGFPN-VVVTGIAMTTALAT-DAETTWKLLLD--GQSGIRTL---DDPFVEEFDLPVRIGGHLLEE------F--   68 (418)
T ss_pred             cccCCCCCCC-EEEEeeEEECCCCC-CHHHHHHHHHc--CCCeeEeC---ChhhhhccCCCcceEEEeccC------c--
Confidence            3455555567 99999999998854 66777666531  11000000   001011111211110000000      0  


Q ss_pred             CCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCC---CCCCccEEEEEecCC-C-------------------------C
Q 044410           93 YEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQ---PVSKITHLIFSAFYG-V-------------------------D  143 (402)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~---~~~dId~li~~s~~~-~-------------------------~  143 (402)
                        -+.+..+..+..+....|+..|+++||+++|+   +++.+. |+++++.+ .                         .
T Consensus        69 --d~~~~~~~~~~~d~~~~~~l~aa~~AledAg~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (418)
T PRK07910         69 --DHQLTRVELRRMSYLQRMSTVLGRRVWENAGSPEVDTNRLM-VSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMY  145 (418)
T ss_pred             --cccCCHHHHhhccHHHHHHHHHHHHHHHHcCCCCCCcccEE-EEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHh
Confidence              01122333333445667999999999999996   344454 44444321 0                         1


Q ss_pred             CC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----c------C-----
Q 044410          144 MP-GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F------H-----  206 (402)
Q Consensus       144 ~p-~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~------~-----  206 (402)
                      ++ ..+.++...+|+...   .+.+..+|++++.||..|.++|++|..+.+||.++|.....     |      .     
T Consensus       146 ~~n~~a~~is~~~~~~G~---~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~  222 (418)
T PRK07910        146 MPNGPAAAVGLERHAKAG---VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNND  222 (418)
T ss_pred             ccccHHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCC
Confidence            11 246678888898875   56789999999999999999999999999999999874210     0      0     


Q ss_pred             ------CCCccchhhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCch
Q 044410          207 ------EPSETHLDVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDV  279 (402)
Q Consensus       207 ------~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v  279 (402)
                            .|.|.++    ..+++|||++++||++.+.... ......++.+.+..              .++.++.. .+.
T Consensus       223 ~~~~~~rPFd~~~----~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~--------------~dg~~~~~-~~~  283 (418)
T PRK07910        223 DPAGACRPFDKDR----DGFVFGEGGALMVIETEEHAKARGANILARIMGASIT--------------SDGFHMVA-PDP  283 (418)
T ss_pred             CCCCCcCCCcCCC----CCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEe--------------cCCCCCCC-CCC
Confidence                  1222222    4789999999999997654111 01112344433221              11111100 010


Q ss_pred             hHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHH
Q 044410          280 PVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFI  353 (402)
Q Consensus       280 ~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~  353 (402)
                         ......++++++|+++|+++ +|| ++-.|-.+..     -.+.+.+.+|-..-.+. +  +-..+||+.+|+-.+.
T Consensus       284 ---~~~~~~~a~~~Al~~agi~~-~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~-s--~K~~~GH~~~AaG~~~  356 (418)
T PRK07910        284 ---NGERAGHAMTRAIELAGLTP-GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVY-A--PKSALGHSVGAVGAVE  356 (418)
T ss_pred             ---CHHHHHHHHHHHHHHhCCCH-HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCcee-C--ccccccccHHHHHHHH
Confidence               11234578899999999997 999 9999986653     35566777773211121 2  3567899999987766


Q ss_pred             HHHHHHhhhhhhcccC-----------------CC----CCceEEEEEEcccccceeeEEee
Q 044410          354 LDEVRKKSIEEMKATT-----------------GE----GLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       354 L~~~~~~~~~~g~i~~-----------------G~----~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      |...+-. +.+|.+.|                 +.    +..+++.-+||-|.+-.+++|+.
T Consensus       357 li~~~l~-l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~  417 (418)
T PRK07910        357 SILTVLA-LRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR  417 (418)
T ss_pred             HHHHHHH-HhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence            5433211 00122211                 00    12567889999999999999874

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=99.44  E-value=7e-12  Score=124.93  Aligned_cols=230  Identities=15%  Similarity=0.110  Sum_probs=150.7

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD--MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~--~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|+++||+++|++++|||.|+++++.+ ..  .+..+..+...+|+...+  .++++++|++++.||..|.++
T Consensus        21 ~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p--~~~v~~~CaSg~~Al~~A~~~   98 (389)
T PRK07516         21 TLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKP--ATRVENACATGSAAVYAALDA   98 (389)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCc--eeeeccccHHHHHHHHHHHHH
Confidence            4789999999999999999999999999987643 21  111223344566776554  788999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCccc-------------c-----C----------------------------------------
Q 044410          185 AENNPGARVLVVCSDIRVLD-------------F-----H----------------------------------------  206 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~~-------------~-----~----------------------------------------  206 (402)
                      |++|.+++|||+++|++|..             +     .                                        
T Consensus        99 I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~  178 (389)
T PRK07516         99 IEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVA  178 (389)
T ss_pred             HHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence            99999999999999986421             0     0                                        


Q ss_pred             CCCc----c-chhh----------------hhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccce
Q 044410          207 EPSE----T-HLDV----------------LVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQ  265 (402)
Q Consensus       207 ~~~~----~-~~~~----------------~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  265 (402)
                      +|..    + +.++                ......++|||+|+||.+.+..... .....+.+.+..+..     ..+.
T Consensus       179 nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~-~~~v~i~g~~~~~~~-----~~~~  252 (389)
T PRK07516        179 NPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARAL-QRAVRFRARAHVNDF-----LPLS  252 (389)
T ss_pred             CChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhc-CCCEEEEEEEeccCc-----cccc
Confidence            0100    0 0000                0112245789999888875431111 112334433221100     0000


Q ss_pred             eecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc--------------
Q 044410          266 LKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE--------------  330 (402)
Q Consensus       266 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e--------------  330 (402)
                                ..+...  ......+++++++++|+++ +|| .+-+|-......-...+.||+.++              
T Consensus       253 ----------~~~~~~--~~~~~~a~~~a~~~agl~~-~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~  319 (389)
T PRK07516        253 ----------RRDPLA--FEGPRRAWQRALAQAGVTL-DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAK  319 (389)
T ss_pred             ----------CCCccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence                      011100  1233468889999999997 999 889998877776777899998864              


Q ss_pred             --ccHHHHHH---HHhcCCCCcchHHHHHHHHHHh
Q 044410          331 --KLWASRYV---LREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       331 --k~~~~~~~---l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                        +++.|  .   +--+||...|+-...+.++..+
T Consensus       320 ~g~~pvN--~sGG~la~Ghp~gasG~~~~~e~~~Q  352 (389)
T PRK07516        320 DGKLPVN--PSGGLKAKGHPIGATGVSMHVLAAMQ  352 (389)
T ss_pred             CCCeeec--CCCCcccCCCCccHHHHHHHHHHHHH
Confidence              22332  1   3358999999988888888764

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.44  E-value=3.6e-12  Score=127.48  Aligned_cols=255  Identities=15%  Similarity=0.172  Sum_probs=162.0

Q ss_pred             HhhHHHHHHHHHHHHHHHcCCCC-CCc----cEEEEEecCC-C-------------------------CCC-CHHHHHHH
Q 044410          106 IDEVPKLGKEAALKAIKEWGQPV-SKI----THLIFSAFYG-V-------------------------DMP-GADVRLMR  153 (402)
Q Consensus       106 ~~~~~~la~~Aa~~aL~~ag~~~-~dI----d~li~~s~~~-~-------------------------~~p-~~a~~i~~  153 (402)
                      .+....|+..|+++||+++|+.. ..+    -.|+++++.+ .                         .+| ..+.+|+.
T Consensus        70 ~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~  149 (405)
T PRK09116         70 MGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGL  149 (405)
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHH
Confidence            34567899999999999999842 212    2466665421 0                         123 25778999


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----c----------------CCCCccch
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F----------------HEPSETHL  213 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----~----------------~~~~~~~~  213 (402)
                      .+|+...   .+.+..+|++++.||..|.++|++|..+.+||.++|..+..    |                ..|.|.++
T Consensus       150 ~~~~~Gp---~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~  226 (405)
T PRK09116        150 FFGLKGR---VIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR  226 (405)
T ss_pred             HhCCCCC---cccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC
Confidence            9999985   57899999999999999999999999999999999874310    0                11222222


Q ss_pred             hhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410          214 DVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS  292 (402)
Q Consensus       214 ~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~  292 (402)
                          ..+++|+||+++||++.+... .......++.+.+...              ++.++. .++     ...+.++++
T Consensus       227 ----~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~--------------d~~~~~-~p~-----~~~~~~ai~  282 (405)
T PRK09116        227 ----DGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNS--------------DGAHVT-QPQ-----AETMQIAME  282 (405)
T ss_pred             ----CCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcC--------------CCCcCC-CCC-----HHHHHHHHH
Confidence                378899999999999754311 1011123444332210              111000 111     234567889


Q ss_pred             HhhccCCCCCCcce-EEEEcCCCH-----HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410          293 NAMSPIGISDWNSL-FYVVHPGGD-----GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK  366 (402)
Q Consensus       293 ~~L~~~gl~~~~di-~~i~H~~~~-----~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~  366 (402)
                      ++|+++|+++ +|| ++.+|-.+.     .-...+.+.+|-   +++.+ .+-..+||+.+|+-.+.+...+.. +.+|.
T Consensus       283 ~AL~~Agi~p-~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~pv~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~  356 (405)
T PRK09116        283 LALKDAGLAP-EDIGYVNAHGTATDRGDIAESQATAAVFGA---RMPIS-SLKSYFGHTLGACGALEAWMSIEM-MNEGW  356 (405)
T ss_pred             HHHHHhCCCH-HHcCEEECcCccCCCCCHHHHHHHHHHhCC---CCeeE-CcchhhcccHHHHHHHHHHHHHHH-HHcCc
Confidence            9999999997 999 999997544     445566777772   22222 134578999877665544432221 00022


Q ss_pred             ccC------------------CC----CCceEEEEEEcccccceeeEEe
Q 044410          367 ATT------------------GE----GLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       367 i~~------------------G~----~~d~vll~~~G~G~~~~~~ll~  393 (402)
                      +.|                  +.    +.+++|..+||-|.+-++++|+
T Consensus       357 ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~  405 (405)
T PRK09116        357 FAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK  405 (405)
T ss_pred             cCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence            211                  00    0156888999999998888875

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=99.44  E-value=4.7e-12  Score=126.70  Aligned_cols=237  Identities=16%  Similarity=0.064  Sum_probs=145.7

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCC-----CCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDM-----PGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLA  181 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~-----p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A  181 (402)
                      +..+|+.+|+++||+++|++++|||.||++++++ +..     +.....++  +++.+.+  +++++.+|+++..+|..|
T Consensus        25 s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~g~~--~~~v~~~Casg~~al~~A  100 (403)
T PRK06289         25 DFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALWGVP--ASRHEAACASGSVATLAA  100 (403)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCCCCc--eeecccccHHHHHHHHHH
Confidence            4789999999999999999999999999988755 211     22222222  2443322  688999999999999999


Q ss_pred             HHHHHcCCCCeEEEEEeccCcccc-------------C------CC-Cccc-----------------------------
Q 044410          182 KDIAENNPGARVLVVCSDIRVLDF-------------H------EP-SETH-----------------------------  212 (402)
Q Consensus       182 ~~~i~~g~~~~vLvv~~e~~s~~~-------------~------~~-~~~~-----------------------------  212 (402)
                      ..+|++|.+++|||+++|+++...             .      .| ....                             
T Consensus       101 a~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~~~~~  180 (403)
T PRK06289        101 MADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAEINFA  180 (403)
T ss_pred             HHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            999999999999999999865210             0      00 0000                             


Q ss_pred             ----------h----------hhh------------hhhhhhccCcEEEEEccCCCCCCCC--CCceEEEeeeeeecCCC
Q 044410          213 ----------L----------DVL------------VVQAVFGDGAGAAIIGADSDISNHE--SPLFQILSCTQTTVPDT  258 (402)
Q Consensus       213 ----------~----------~~~------------~~~~lfGDGAaA~vL~~~~~~~~~~--~~~~~~~~~~~~~~p~~  258 (402)
                                +          ++.            ..+...+|||+|+||.+.+......  .+...+.+.+....+..
T Consensus       181 ~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~  260 (403)
T PRK06289        181 NARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLG  260 (403)
T ss_pred             HHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccc
Confidence                      0          000            0111235888888887654311110  12245554433211100


Q ss_pred             cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-------
Q 044410          259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-------  330 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-------  330 (402)
                           +..+.+.   . ..+...  ......+.+++++++|+++ +|| .+-+|-.-..+.-...+.||+.+.       
T Consensus       261 -----~~~~~~~---~-~~~~~~--~~~~~~aa~~a~~~Agi~~-~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v  328 (403)
T PRK06289        261 -----LEQKLDR---S-AGDPYV--LPHVRQAVLDAYRRAGVGL-DDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAI  328 (403)
T ss_pred             -----ccccccc---c-cccccc--cHHHHHHHHHHHHHcCCCH-HHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHH
Confidence                 0000000   0 000001  1113457889999999997 999 888898877777777899998752       


Q ss_pred             ---------ccHHHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410          331 ---------KLWASR-YVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       331 ---------k~~~~~-~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                               +++.|. -=.-.+||...++-+..+.+++.+
T Consensus       329 ~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~Q  368 (403)
T PRK06289        329 ENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQ  368 (403)
T ss_pred             hcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHH
Confidence                     122210 001247999988888888887775

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=99.44  E-value=2.1e-12  Score=128.50  Aligned_cols=95  Identities=14%  Similarity=0.033  Sum_probs=83.9

Q ss_pred             hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      ++.+|+.+|++++|++ +|+++++||.|++++...  ...+..+..++..+|++... +++.++++|+|++.|+..|...
T Consensus        24 ~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~-p~~~V~~~CaSG~~Ai~~a~~~  102 (400)
T TIGR02430        24 RADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV-PGTTVNRLCGSGLDAIGMAARA  102 (400)
T ss_pred             CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEeechhhhHHHHHHHHHHH
Confidence            3789999999999995 799999999999998764  32367788899999998533 2889999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |++|..+.+|+++.|++|.
T Consensus       103 I~sG~~d~~la~G~E~ms~  121 (400)
T TIGR02430       103 IKAGEADLLIAGGVESMSR  121 (400)
T ss_pred             HHCCCCCEEEEeccccccC
Confidence            9999999999999999984

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=99.44  E-value=4.1e-12  Score=127.87  Aligned_cols=259  Identities=15%  Similarity=0.160  Sum_probs=165.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCC-CCCccE----EEEEecCC-C---------------------CCC-----CHHHHHHHHc
Q 044410          108 EVPKLGKEAALKAIKEWGQP-VSKITH----LIFSAFYG-V---------------------DMP-----GADVRLMRLL  155 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~-~~dId~----li~~s~~~-~---------------------~~p-----~~a~~i~~~L  155 (402)
                      ...+|+..|+++||+++|++ +++++.    ++++++.+ .                     ..|     ..+.+|...+
T Consensus        76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~  155 (421)
T PTZ00050         76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH  155 (421)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence            36789999999999999998 666542    44444321 1                     011     2467788899


Q ss_pred             CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----------CCCCccch
Q 044410          156 GLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEPSETHL  213 (402)
Q Consensus       156 Gl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----------~~~~~~~~  213 (402)
                      |+...   .+.+..+|++++.||..|..+|++|..+.+||+++|.....           +           ..|.+.++
T Consensus       156 ~l~Gp---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~  232 (421)
T PTZ00050        156 KLKGP---SGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR  232 (421)
T ss_pred             CCCCc---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence            99875   57889999999999999999999999999999999863210           0           01222222


Q ss_pred             hhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410          214 DVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS  292 (402)
Q Consensus       214 ~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~  292 (402)
                          ..+++||||+++||++.+.... ......++.+.+...              ++.++.. +. +  ......++++
T Consensus       233 ----~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~--------------d~~~~~~-p~-~--~~~~~~~ai~  290 (421)
T PTZ00050        233 ----AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSS--------------DAHHITA-PH-P--DGRGARRCME  290 (421)
T ss_pred             ----CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCCC-CC-C--ChHHHHHHHH
Confidence                3578999999999998654111 011122344332210              0100000 00 0  1234557889


Q ss_pred             Hhhcc-CCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc-cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410          293 NAMSP-IGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK-EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE  364 (402)
Q Consensus       293 ~~L~~-~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~-ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~  364 (402)
                      ++|++ +|+++ +|| ++-+|-.+...     .+.+.+.++-.. +.++.+ .+-..+||+.+|+-.+.|...+.. +.+
T Consensus       291 ~Al~~~Agi~~-~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~-s~K~~~GH~~~AaG~~~l~~~~l~-l~~  367 (421)
T PTZ00050        291 NALKDGANINI-NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVS-STKGGLGHLLGAAGAVESIVTILS-LYE  367 (421)
T ss_pred             HHHHhccCCCh-hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEE-CccccccccHHHHHHHHHHHHHHH-HHc
Confidence            99999 99997 999 99999766533     345666666432 333332 134478999999987777654421 111


Q ss_pred             hcccC-----------------C------CCCceEEEEEEcccccceeeEEee
Q 044410          365 MKATT-----------------G------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       365 g~i~~-----------------G------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +.+.+                 +      ....+++..+||-|.+-++++|+.
T Consensus       368 ~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~  420 (421)
T PTZ00050        368 QIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK  420 (421)
T ss_pred             CccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence            33321                 0      012578899999999999999874

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.43  E-value=8.6e-12  Score=124.99  Aligned_cols=255  Identities=16%  Similarity=0.102  Sum_probs=161.6

Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC----------------------C----CCC-CHHHHHHH
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG----------------------V----DMP-GADVRLMR  153 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~----------------------~----~~p-~~a~~i~~  153 (402)
                      ..+....|+..|+++||+++|+++++++    .+++++...                      +    .++ ..+.+|+.
T Consensus        68 ~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~  147 (406)
T PRK08439         68 KADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISI  147 (406)
T ss_pred             hcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHH
Confidence            3345678999999999999999887775    355544311                      0    112 46788999


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC-cc----------c----------cCCCCccc
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VL----------D----------FHEPSETH  212 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~----------~----------~~~~~~~~  212 (402)
                      .+|+...   .+.+..+|++++.||..|.++|++|..+.+||+++|.. +.          .          ...|.|.+
T Consensus       148 ~~gl~Gp---~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~  224 (406)
T PRK08439        148 EHGLKGP---NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKD  224 (406)
T ss_pred             HhCCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCC
Confidence            9999975   56778999999999999999999999999999999963 10          0          01132222


Q ss_pred             hhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410          213 LDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL  291 (402)
Q Consensus       213 ~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i  291 (402)
                      +    ..+++|+||+++||++.+... .......++.+.+..    .          ++.++. .+.     .+...++|
T Consensus       225 ~----~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~----~----------d~~~~~-~p~-----~~~~~~a~  280 (406)
T PRK08439        225 R----DGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGES----G----------DANHIT-SPA-----PEGPLRAM  280 (406)
T ss_pred             C----CcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEcc----C----------CCCCCC-CCC-----HHHHHHHH
Confidence            2    367899999999999754411 100111233322211    0          110000 111     13455788


Q ss_pred             HHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH---HHhhh
Q 044410          292 SNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV---RKKSI  362 (402)
Q Consensus       292 ~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~---~~~~~  362 (402)
                      +++|+++|+   ++| ++..|-.+..     -.+.+.+.++-.....+.+ .+-..+||+.+|+-.+.+...   +++  
T Consensus       281 ~~al~~ag~---~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~-s~K~~~Gh~~~AsG~~~~~~~~~~l~~--  354 (406)
T PRK08439        281 KAALEMAGN---PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVS-STKGQIGHCLGAAGAIEAVISIMAMRD--  354 (406)
T ss_pred             HHHHHHcCC---CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEE-CcccccccCchhhhHHHHHHHHHHHhC--
Confidence            899999987   457 8999976543     3445566666432222221 123469999999877655433   232  


Q ss_pred             hhhcccC-----------------C----CCCceEEEEEEcccccceeeEEee
Q 044410          363 EEMKATT-----------------G----EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       363 ~~g~i~~-----------------G----~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                        |.+.+                 +    .+...++.-+||-|.+-++++|+.
T Consensus       355 --~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~  405 (406)
T PRK08439        355 --GILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK  405 (406)
T ss_pred             --CeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence              33221                 0    011567889999999999999874

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=99.43  E-value=9.6e-12  Score=123.74  Aligned_cols=94  Identities=14%  Similarity=0.029  Sum_probs=80.5

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      ++.+|+.+|++++|+++|++++|||.+++++..+ ...+..+..++..+|++.... .+.++.+|++++.++..|.+.|+
T Consensus        25 ~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~v~~~caSg~~av~~Aa~~I~  103 (388)
T PRK06366         25 KAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVT-KYTVNVVCASGMLAVESAAREIM  103 (388)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCc-ceeeechhhHHHHHHHHHHHHHh
Confidence            3789999999999999999999999999887644 223345678899999985322 77889999999999999999999


Q ss_pred             cCCCCeEEEEEeccCc
Q 044410          187 NNPGARVLVVCSDIRV  202 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s  202 (402)
                      +|.++.||+++.|++|
T Consensus       104 sG~~d~vla~G~e~ms  119 (388)
T PRK06366        104 LGERDLVIAGGMENMS  119 (388)
T ss_pred             cCCCCEEEEEeeEccc
Confidence            9999999998889876

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.42  E-value=1.3e-11  Score=122.37  Aligned_cols=251  Identities=14%  Similarity=0.142  Sum_probs=161.7

Q ss_pred             HHHHHHHHHHHHHcCCCC--CCccEEEEEecCC-----------------------------CCCC-CHHHHHHHHcCCC
Q 044410          111 KLGKEAALKAIKEWGQPV--SKITHLIFSAFYG-----------------------------VDMP-GADVRLMRLLGLK  158 (402)
Q Consensus       111 ~la~~Aa~~aL~~ag~~~--~dId~li~~s~~~-----------------------------~~~p-~~a~~i~~~LGl~  158 (402)
                      .++..|+++||+++|+++  +++. |+++++.+                             ..+| ..+.+++..+|++
T Consensus        58 ~~~~~a~~~Al~dagl~~~~~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~  136 (381)
T PRK05952         58 DLTKTVVTAALKDAGLTPPLTDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ  136 (381)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence            366689999999999964  3444 55555321                             0112 2467889999999


Q ss_pred             CccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecc-Ccc--------------ccCCCCccchhhhhhhhhhc
Q 044410          159 PSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI-RVL--------------DFHEPSETHLDVLVVQAVFG  223 (402)
Q Consensus       159 ~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~-~s~--------------~~~~~~~~~~~~~~~~~lfG  223 (402)
                      ..   .+.+..+|++++.||..|.++|++|..+.+||.++|. .+.              .-..|.|.++    ..+++|
T Consensus       137 Gp---~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r----~G~v~g  209 (381)
T PRK05952        137 GP---VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR----EGLVLG  209 (381)
T ss_pred             Cc---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC----CCcccc
Confidence            75   6788999999999999999999999999999999996 221              0012433322    367999


Q ss_pred             cCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCC
Q 044410          224 DGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISD  302 (402)
Q Consensus       224 DGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~  302 (402)
                      |||+++||++.+... .......++.+.+....              +.+... +..   -.....++++++|+++|+.+
T Consensus       210 EGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d--------------~~~~~~-~~~---~~~~~~~ai~~Al~~agi~p  271 (381)
T PRK05952        210 EGGAILVLESAELAQKRGAKIYGQILGFGLTCD--------------AYHMSA-PEP---DGKSAIAAIQQCLARSGLTP  271 (381)
T ss_pred             ccEEEEEEeeHHHHHhCCCceEEEEEEEEecCC--------------CCCCCC-CCC---CHHHHHHHHHHHHHHhCCCH
Confidence            999999999864311 10111234444332110              100000 000   12345678899999999997


Q ss_pred             Ccce-EEEEcCCCHHHH-----HHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCC------
Q 044410          303 WNSL-FYVVHPGGDGLL-----DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTG------  370 (402)
Q Consensus       303 ~~di-~~i~H~~~~~~~-----~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G------  370 (402)
                       +|| ++..|-.+....     +.+.+.++   ++++.+ .+-..+||+.+|+-.+.+..++.. +.++.+.|-      
T Consensus       272 -~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ipp~~~~~~~  345 (381)
T PRK05952        272 -EDIDYIHAHGTATRLNDQREANLIQALFP---HRVAVS-STKGATGHTLGASGALGVAFSLLA-LRHQQLPPCVGLQEP  345 (381)
T ss_pred             -HHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCeee-cchhhhccChHHHHHHHHHHHHHH-HhcCccCCCCCCCCC
Confidence             999 999997765443     34455565   233332 134589999999987777654421 111333320      


Q ss_pred             ------------CCCceEEEEEEcccccceeeEEe
Q 044410          371 ------------EGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       371 ------------~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                                  .+.++++..+||-|..-++++|+
T Consensus       346 ~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~  380 (381)
T PRK05952        346 EFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG  380 (381)
T ss_pred             CCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence                        01257899999999999998886

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=99.42  E-value=4.8e-12  Score=126.11  Aligned_cols=95  Identities=13%  Similarity=0.045  Sum_probs=84.0

Q ss_pred             hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      ++.+|+.+|++++|++ +|+++++||.|++++..+ .. .+..+..++..+|++.... ++.++++|+|+..|+..|.+.
T Consensus        25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP-~~tV~~aCaSG~~Ai~~A~~~  103 (401)
T PRK09050         25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVP-GTTINRLCGSGMDAVGTAARA  103 (401)
T ss_pred             CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCc-eEEEecccccHHHHHHHHHHH
Confidence            3789999999999995 799999999999998765 32 3667888999999976443 889999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |++|..+.+|+++.|++|.
T Consensus       104 I~sG~~dvvlagGvEsmS~  122 (401)
T PRK09050        104 IKAGEAELMIAGGVESMSR  122 (401)
T ss_pred             HHCCCCCEEEEeccccccc
Confidence            9999999999999999984

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.42  E-value=2.6e-11  Score=120.99  Aligned_cols=213  Identities=13%  Similarity=0.082  Sum_probs=140.6

Q ss_pred             CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc--------------cCCCCcc
Q 044410          146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD--------------FHEPSET  211 (402)
Q Consensus       146 ~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~--------------~~~~~~~  211 (402)
                      ..+.+|+..||+...   .+.+..+|++++.||..|.++|++|.++.|||+++|..+..              ...|.+.
T Consensus       138 ~~a~~ia~~lgl~Gp---~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~  214 (392)
T PRK09185        138 SLADFLRAYLGLSGP---AYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSA  214 (392)
T ss_pred             HHHHHHHHHhCCCCC---cccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcC
Confidence            578899999999864   67889999999999999999999999999999999864321              1123332


Q ss_pred             chhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410          212 HLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL  291 (402)
Q Consensus       212 ~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i  291 (402)
                      ++    ..+++||||+++||++... .     ..++.+.+...-              +.+.. ... +  ....+.+++
T Consensus       215 ~~----~G~~~gEGaa~vVLe~~~~-~-----~~~I~g~g~~~d--------------~~~~~-~~~-~--~~~~~~~a~  266 (392)
T PRK09185        215 NR----DGINIGEAAAFFLLEREDD-A-----AVALLGVGESSD--------------AHHMS-APH-P--EGLGAILAM  266 (392)
T ss_pred             CC----CccceeceEEEEEEEEcCC-C-----cEEEEEEEEeCC--------------CCCCC-CCC-C--CHHHHHHHH
Confidence            22    3688999999999998733 1     234544332210              00000 000 0  112345788


Q ss_pred             HHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhh
Q 044410          292 SNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEM  365 (402)
Q Consensus       292 ~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g  365 (402)
                      +++|+++|+++ +|| ++.+|-.+...     ...+.+.++-.   ++.+ .+-..+||+.+|+-.+.|...+.. +.+|
T Consensus       267 ~~Al~~Agl~~-~dId~v~~hgtgt~~~D~~E~~al~~~f~~~---~pv~-s~K~~~Gh~~~AaG~~~l~~~~~~-l~~~  340 (392)
T PRK09185        267 QQALADAGLAP-ADIGYINLHGTATPLNDAMESRAVAAVFGDG---VPCS-STKGLTGHTLGAAGAVEAAICWLA-LRHG  340 (392)
T ss_pred             HHHHHHcCCCH-HHccEEEeCCCCCcCCCHHHHHHHHHHhCCC---Ccee-CCCcccccChhhcchHHHHHHHHH-HhcC
Confidence            99999999997 999 99999776443     44556666532   2221 123478999999877776554421 0113


Q ss_pred             cccC---------CC------------CCceEEEEEEcccccceeeEEeee
Q 044410          366 KATT---------GE------------GLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       366 ~i~~---------G~------------~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      .+.+         ..            +.++++..+||-|.+-.+++|+..
T Consensus       341 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~  391 (392)
T PRK09185        341 LPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA  391 (392)
T ss_pred             CCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence            2221         00            026788999999999999999864

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.41  E-value=7.6e-12  Score=124.67  Aligned_cols=95  Identities=16%  Similarity=0.097  Sum_probs=83.9

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ++.+|+.+|++++|+++|++++|||.+++++..+  ...+..+..++..+|++.... ++.++++|++++.|+..|.+.|
T Consensus        25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p-~~tV~~~CaSG~~Ai~~A~~~I  103 (401)
T PRK08131         25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVP-GQTVNRLCASGLAAVIDAARAI  103 (401)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCc-eeeeechhhhHHHHHHHHHHHH
Confidence            4789999999999999999999999999998754  223567777889999985432 8899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|..+.+|+++.|++|.
T Consensus       104 ~sG~~dvvlagG~Esms~  121 (401)
T PRK08131        104 TCGEGDLYLAGGVESMSR  121 (401)
T ss_pred             HCCCCCEEEEEEecCCCC
Confidence            999999999999999884

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.41  E-value=3.8e-11  Score=119.44  Aligned_cols=248  Identities=13%  Similarity=0.051  Sum_probs=160.4

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCC-----CccEEEEEecCC-C-------------------------------------C
Q 044410          107 DEVPKLGKEAALKAIKEWGQPVS-----KITHLIFSAFYG-V-------------------------------------D  143 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~~~~-----dId~li~~s~~~-~-------------------------------------~  143 (402)
                      +....|+..|+++||+++|++..     ++. |+++++.+ .                                     .
T Consensus        71 ~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~G-vivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  149 (398)
T PRK06519         71 ETWQRLGTYAAGLALDDAGIKGNEELLSTMD-MIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQ  149 (398)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCCCCCccceE-EEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhh
Confidence            34678999999999999998543     333 44555432 1                                     0


Q ss_pred             CC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------cC-----C
Q 044410          144 MP-GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FH-----E  207 (402)
Q Consensus       144 ~p-~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~~-----~  207 (402)
                      +| ..+.+|+..+|+...   .+.+..+|++++.||..|.++|++|..+.+||.++|.....          +.     .
T Consensus       150 ~~n~~a~~is~~~gl~Gp---~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~  226 (398)
T PRK06519        150 LSNLLAGNISIVHKVTGS---SRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWA  226 (398)
T ss_pred             hhhHHHHHHHHHhCCCCc---cccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCC
Confidence            11 256788999999985   57899999999999999999999999999999999863210          10     1


Q ss_pred             CCccch--hhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHH
Q 044410          208 PSETHL--DVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIG  284 (402)
Q Consensus       208 ~~~~~~--~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~  284 (402)
                      |.+ ++  .+ ...++.|+||+++||++.+... .......++.+.+...              .      ..     -.
T Consensus       227 p~~-d~~~~~-r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~--------------~------~~-----~~  279 (398)
T PRK06519        227 PVW-SRGGED-GGGFILGSGGAFLVLESREHAEARGARPYARISGVESDR--------------A------RR-----AP  279 (398)
T ss_pred             chh-ccCccC-CCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecC--------------C------CC-----Ch
Confidence            111 11  01 2478999999999999866411 1111123444332110              0      00     01


Q ss_pred             HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410          285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVR  358 (402)
Q Consensus       285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~  358 (402)
                      ..+.++|+++|+++|+ + +|| |+..|-.+...     .+.+.+.+++|..   .   +-..+||+.+|+-.+.+...+
T Consensus       280 ~~~~~am~~AL~~Agl-~-~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvs---S---~Ks~~GH~l~AAGa~e~i~~~  351 (398)
T PRK06519        280 GDLEASLERLLKPAGG-L-AAPTAVISGATGAHPATAEEKAALEAALAGPVR---G---IGTLFGHTMEAQFPLGLALAA  351 (398)
T ss_pred             HHHHHHHHHHHHHCCC-c-ccCCEEEeCCCCCCCccHHHHHHHHHHcCCCcc---c---cchhhccchHHHHHHHHHHHH
Confidence            2356799999999999 7 899 99999776443     5556777775422   2   355799999998777765444


Q ss_pred             HhhhhhhcccCCCCC----------ceEEEEEEcccccceeeEEee
Q 044410          359 KKSIEEMKATTGEGL----------ECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       359 ~~~~~~g~i~~G~~~----------d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .. +.+|.+.|.-..          ...|.+++|.|-.-|..+++.
T Consensus       352 la-l~~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (398)
T PRK06519        352 LS-VSKGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVEA  396 (398)
T ss_pred             HH-HhcCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEEe
Confidence            32 111544332111          237788888877667777653

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=99.40  E-value=2.3e-11  Score=118.71  Aligned_cols=253  Identities=15%  Similarity=0.110  Sum_probs=161.2

Q ss_pred             HHHHHHHHHHHHHHHcCC--CCCCccEEEEEecCC-C-------------------------CCC-CHHHHHHHHcCCCC
Q 044410          109 VPKLGKEAALKAIKEWGQ--PVSKITHLIFSAFYG-V-------------------------DMP-GADVRLMRLLGLKP  159 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~--~~~dId~li~~s~~~-~-------------------------~~p-~~a~~i~~~LGl~~  159 (402)
                      ...++..|+++||+++|+  +++++. |+++++.+ .                         .++ ..+.+|...+|++.
T Consensus         4 ~~~~~~~a~~~a~~~a~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G   82 (342)
T PRK14691          4 WWRYKWITFHPSLTHADNTEKQERTA-TIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG   82 (342)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcccEE-EEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence            567889999999999996  455665 44444321 0                         011 35778899999998


Q ss_pred             ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----------CCCCccchhhhh
Q 044410          160 SVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEPSETHLDVLV  217 (402)
Q Consensus       160 ~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----------~~~~~~~~~~~~  217 (402)
                      .   .+.+..+|++++.||..|.++|+.|..+.+||.++|.....           +           ..|.|.++    
T Consensus        83 p---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r----  155 (342)
T PRK14691         83 P---IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR----  155 (342)
T ss_pred             C---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC----
Confidence            5   57889999999999999999999999999999999863210           0           11333222    


Q ss_pred             hhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhc
Q 044410          218 VQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS  296 (402)
Q Consensus       218 ~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~  296 (402)
                      ..+++||||+++||++.+... .......++.+.+....              +.++.. .. +  ......++++++|+
T Consensus       156 ~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d--------------~~~~~~-p~-p--~~~~~~~ai~~AL~  217 (342)
T PRK14691        156 DGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSAD--------------AYHMTS-GA-E--DGDGAYRAMKIALR  217 (342)
T ss_pred             CCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcC--------------CCCCCC-CC-C--CHHHHHHHHHHHHH
Confidence            478999999999998764411 11122345554432210              000000 00 0  12334568889999


Q ss_pred             cCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH---HHhhhhhhcc
Q 044410          297 PIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV---RKKSIEEMKA  367 (402)
Q Consensus       297 ~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~---~~~~~~~g~i  367 (402)
                      ++|+++ +|| ++..|-.+...     ...+.+.+|-. ..++.+ .+-..+||+.+|+-.+.+...   +++    +.+
T Consensus       218 ~Agl~p-~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~l~~----~~i  290 (342)
T PRK14691        218 QAGITP-EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAIT-STKSATGHLLGAAGGLETIFTVLALRD----QIV  290 (342)
T ss_pred             HcCCCH-HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEE-CCcccccCCcchhhHHHHHHHHHHHhC----Ccc
Confidence            999997 999 99999765443     44566777632 223332 134578998766644433322   222    221


Q ss_pred             cC------------------CC----CCceEEEEEEcccccceeeEEee
Q 044410          368 TT------------------GE----GLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       368 ~~------------------G~----~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .|                  +.    +.+++|..+||-|..-++++|+.
T Consensus       291 ppt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~  339 (342)
T PRK14691        291 PATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR  339 (342)
T ss_pred             CCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence            11                  00    12568889999999999999874

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=99.40  E-value=2.1e-11  Score=121.01  Aligned_cols=95  Identities=11%  Similarity=0.039  Sum_probs=80.0

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ++.+|+.+|++++|+++|++++|||.+|+++..+ .. .+..+..+.-..|++... +++.++.+|+|++.|+..|.+.|
T Consensus        25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v-P~~tV~~~CaSG~~Ai~~A~~~I  103 (390)
T PRK06504         25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV-PGTSIDRQCGSSQQALHFAAQAV  103 (390)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEEechhhHHHHHHHHHHHHH
Confidence            3789999999999999999999999999998764 22 245555555555885433 38899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|.++.+|+++.|++|.
T Consensus       104 ~sG~~dvvLagGvEsmS~  121 (390)
T PRK06504        104 MSGTMDIVIAAGVESMTR  121 (390)
T ss_pred             HCCCCCEEEEeeeeecCC
Confidence            999999999999999874

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=99.39  E-value=2.8e-11  Score=121.58  Aligned_cols=95  Identities=12%  Similarity=0.055  Sum_probs=82.1

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|++++|+++|+++++||.+|+++..+ ...+.++..+.-..|++... +++.++++|+|++.|+..|.+.|+
T Consensus        30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~-p~~~V~~~CaSG~~A~~~a~~~I~  108 (430)
T TIGR02446        30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT-DAYSVTRACATSFQSAVNVAESIM  108 (430)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCC-chhhhhhhhhHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999998765 22345666666668998433 288999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|.++.+|+++.|++|.
T Consensus       109 sG~~dvvla~G~E~mS~  125 (430)
T TIGR02446       109 AGAIDIGIAGGADSSSV  125 (430)
T ss_pred             CCCCCEEEEeeeEcccC
Confidence            99999999999999984

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=99.38  E-value=2e-11  Score=121.38  Aligned_cols=254  Identities=13%  Similarity=0.073  Sum_probs=158.1

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|+++||+++|++++|||.|++++...  ...+..+....-.+|++... +.+.++.+|+++..++..|.+.|
T Consensus        25 ~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~-p~~~v~~acaSg~~Av~~Aa~~I  103 (382)
T PRK07801         25 HPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV-PGVTVDRQCGSSQQAIHFAAQAV  103 (382)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC-ceeeecchhhhHHHHHHHHHHHH
Confidence            3789999999999999999999999999876422  11233444444457775432 26778999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc-cc------C----------------CCCc--c----------------chh----------
Q 044410          186 ENNPGARVLVVCSDIRVL-DF------H----------------EPSE--T----------------HLD----------  214 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~-~~------~----------------~~~~--~----------------~~~----------  214 (402)
                      ++|..+.|||++.|.+|. .+      .                +|..  .                +++          
T Consensus       104 ~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~~  183 (382)
T PRK07801        104 MSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESH  183 (382)
T ss_pred             HCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            999999999999986642 10      0                0000  0                000          


Q ss_pred             -----h------------------------------hhhhhhh-------------ccCcEEEEEccCCCCCCC-CCCce
Q 044410          215 -----V------------------------------LVVQAVF-------------GDGAGAAIIGADSDISNH-ESPLF  245 (402)
Q Consensus       215 -----~------------------------------~~~~~lf-------------GDGAaA~vL~~~~~~~~~-~~~~~  245 (402)
                           +                              .....++             +|||+|+||.+.+..... ..+..
T Consensus       184 ~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~  263 (382)
T PRK07801        184 RRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRA  263 (382)
T ss_pred             HHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEecHHHHHHCCCCccE
Confidence                 0                              0000011             366666665543320000 00112


Q ss_pred             EEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410          246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKT  324 (402)
Q Consensus       246 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~  324 (402)
                      ++.+...                     ......  .........++++++++|+++ +|| ++=+|-.-....-...+.
T Consensus       264 ~i~~~~~---------------------~~~~~~--~~~~~~~~a~~~a~~~agi~~-~did~~e~~d~Fa~~~~~~~e~  319 (382)
T PRK07801        264 RIHHLSV---------------------RGDDPV--FMLTAPIPATRYALEKTGLSI-DDIDVVEINEAFAPVVLAWLKE  319 (382)
T ss_pred             EEEEEEE---------------------ecCChH--hhccChHHHHHHHHHHcCCCH-HHcCEeeecccchHHHHHHHHH
Confidence            2221100                     000100  011112357889999999997 999 888888766667777889


Q ss_pred             cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          325 LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       325 lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      ||+.++++..+ --.-.+||...|+-...+.++.++..  +   .|  ..+.+....|.|.+..+++++.
T Consensus       320 lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~--~---~~--~~~gl~~~~gggg~~~~~vl~~  381 (382)
T PRK07801        320 TGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELE--R---TG--GRYGLQTMCEGGGTANVTIIER  381 (382)
T ss_pred             hCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHH--h---cC--CCEEEEEEcccccceeEEEEEe
Confidence            99998766543 22446899999998888888887521  2   23  1455555566666666666653

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=99.38  E-value=2.1e-11  Score=121.85  Aligned_cols=253  Identities=12%  Similarity=0.064  Sum_probs=162.7

Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C-----------------C----C----C-CHHHHHHH
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V-----------------D----M----P-GADVRLMR  153 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~-----------------~----~----p-~~a~~i~~  153 (402)
                      ..+....|+..|+++||+++|+++++++    .|+++++.+ +                 .    .    + ..+.+|+.
T Consensus        67 ~~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~  146 (399)
T cd00832          67 QTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISI  146 (399)
T ss_pred             hCCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHH
Confidence            3445678999999999999999876543    456665432 1                 0    0    1 24678999


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c---------CCCCccch
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F---------HEPSETHL  213 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~---------~~~~~~~~  213 (402)
                      .+|+...   .+.+..+|++++.||..|.++|++|. +.+||.++|.....           +         ..|.|.++
T Consensus       147 ~~gl~Gp---~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~  222 (399)
T cd00832         147 RHGMRGP---SGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA  222 (399)
T ss_pred             HhCCCCC---cccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC
Confidence            9999975   57889999999999999999999999 99999999873210           0         11222222


Q ss_pred             hhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410          214 DVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS  292 (402)
Q Consensus       214 ~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~  292 (402)
                          ..+++|+||+++||++.+... .......++.+.+...              ++..  ...     ....+.++|+
T Consensus       223 ----~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~--------------d~~~--~~~-----~~~~~~~a~~  277 (399)
T cd00832         223 ----AGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATF--------------DPPP--GSG-----RPPGLARAIR  277 (399)
T ss_pred             ----CCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcC--------------CCCC--CCC-----CHHHHHHHHH
Confidence                478999999999999865411 1011122344332211              1100  000     1345668899


Q ss_pred             HhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410          293 NAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK  366 (402)
Q Consensus       293 ~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~  366 (402)
                      ++|+++|+++ ++| ++..|..+..     -.+.+.+.+|-.  +++.+ .+-..+||+.+|+-.+.|...+.. +.++.
T Consensus       278 ~al~~ag~~~-~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~pv~-s~K~~~Gh~~~aaG~~~l~~~~l~-l~~~~  352 (399)
T cd00832         278 LALADAGLTP-EDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVPVT-APKTMTGRLYAGGAPLDVATALLA-LRDGV  352 (399)
T ss_pred             HHHHHcCCCH-HHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CCcee-CCCchhcchHHHHHHHHHHHHHHH-HhCCC
Confidence            9999999997 999 9999976543     345566667642  33332 123468999999888877654321 00022


Q ss_pred             cc----------------------CCCCCceEEEEEEcccccceeeEE
Q 044410          367 AT----------------------TGEGLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       367 i~----------------------~G~~~d~vll~~~G~G~~~~~~ll  392 (402)
                      +.                      +. +.++++.-+||-|..-.+++|
T Consensus       353 ipp~~n~~~~~p~~~l~~v~~~~~~~-~~~~al~nsfgfGG~na~lvl  399 (399)
T cd00832         353 IPPTVNVTDVPPAYGLDLVTGRPRPA-ALRTALVLARGRGGFNSALVV  399 (399)
T ss_pred             cCCCCCCCCCCCCCCcccCCCcccCC-CCCEEEEeccCCCCcceEEEC
Confidence            11                      11 126788888998887777664

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=99.38  E-value=7.5e-13  Score=101.58  Aligned_cols=66  Identities=21%  Similarity=0.255  Sum_probs=54.6

Q ss_pred             eeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC
Q 044410          165 MIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD  236 (402)
Q Consensus       165 ~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~  236 (402)
                      ||++++|++++.||++|..+|++|..++||||++|+.+. +.++.     ++....+|||||+|+||++.+.
T Consensus         1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~-----~~~~~~~~gDgAaA~vl~~~~~   66 (80)
T PF08545_consen    1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRT-----DRQTAFIFGDGAAAVVLSRDEE   66 (80)
T ss_dssp             EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTT-----HHHHHTTB-EEEEEEEEEEESS
T ss_pred             CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-ccccc-----ccCcceeecchheEEEEEecCC
Confidence            689999999999999999999999999999999999997 43332     3456789999999999999743

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=99.36  E-value=1.5e-11  Score=124.38  Aligned_cols=260  Identities=13%  Similarity=0.046  Sum_probs=161.4

Q ss_pred             hHHHHHHHHHHHHHHHcCCCC-----CCccEEEEEecCC-C-------------------------CCC-CHHHHHHHHc
Q 044410          108 EVPKLGKEAALKAIKEWGQPV-----SKITHLIFSAFYG-V-------------------------DMP-GADVRLMRLL  155 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~-----~dId~li~~s~~~-~-------------------------~~p-~~a~~i~~~L  155 (402)
                      ....|+..|+.+||+++|+++     .+...|+++++.+ .                         .++ ..+.+|...+
T Consensus        92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~  171 (437)
T PLN02836         92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY  171 (437)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence            356799999999999999854     2456788776422 1                         011 2467899999


Q ss_pred             CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------------------cCCCCccch
Q 044410          156 GLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------------------FHEPSETHL  213 (402)
Q Consensus       156 Gl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------------------~~~~~~~~~  213 (402)
                      |+...   .+.+..+|++++.||..|..+|++|.++.+||.++|.....                      ...|.+.++
T Consensus       172 gl~Gp---~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~  248 (437)
T PLN02836        172 GFQGP---NHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR  248 (437)
T ss_pred             CCCCc---eeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC
Confidence            99875   67899999999999999999999999999999998863110                      011222222


Q ss_pred             hhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHH
Q 044410          214 DVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLS  292 (402)
Q Consensus       214 ~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~  292 (402)
                          ..+++||||+++||++.+.... ......++.+.+..    +          ++.++. .+.   .-......+++
T Consensus       249 ----~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~----~----------d~~~~~-~p~---~~~~~~~~a~~  306 (437)
T PLN02836        249 ----DGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMS----G----------DAHHIT-QPH---EDGRGAVLAMT  306 (437)
T ss_pred             ----CCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeec----C----------CCCCCc-CCC---cchHHHHHHHH
Confidence                3678999999999997654111 00112344433221    0          010000 010   01233456788


Q ss_pred             HhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc--cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410          293 NAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK--EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE  364 (402)
Q Consensus       293 ~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~--ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~  364 (402)
                      ++|+++|+++ ++| ++-.|-.+...     .+.+.+.++-..  ..++.+ .+-..+||+.+|+-.+.|...+.. +.+
T Consensus       307 ~Al~~Agi~~-~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~l~-l~~  383 (437)
T PLN02836        307 RALQQSGLHP-NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFS-STKGATGHLLGAAGAVEAIFSVLA-IHH  383 (437)
T ss_pred             HHHHHcCCCH-hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeE-CCcccccccHHHHHHHHHHHHHHH-Hhc
Confidence            9999999997 999 99999766543     334555554321  122221 124467999888876654433221 111


Q ss_pred             hcccC----------------------CCCCceEEEEEEcccccceeeEEeee
Q 044410          365 MKATT----------------------GEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       365 g~i~~----------------------G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      +.+.+                      ..+-+.+|.-+||-|.+-++++|+..
T Consensus       384 ~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~  436 (437)
T PLN02836        384 GIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP  436 (437)
T ss_pred             CccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence            32211                      00114567778999999999998754

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.35  E-value=4.6e-11  Score=118.76  Aligned_cols=94  Identities=12%  Similarity=0.040  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ..+|+..+++++|++ +|+++++||.+++++..+ .. .+..+..+...+|++... +++.++++|++++.|+..|.++|
T Consensus        27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~-p~~~V~~~caSG~~Ai~~A~~~I  105 (387)
T PRK08947         27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSV-PAVTVNRLCGSSMQALHDAARAI  105 (387)
T ss_pred             HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCC-cceeeechhHHHHHHHHHHHHHH
Confidence            789999999999996 799999999999997754 32 355677788899998533 27899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|..+.||+++.|++|.
T Consensus       106 ~sG~~d~vlv~G~E~ms~  123 (387)
T PRK08947        106 MTGDGDVFLIGGVEHMGH  123 (387)
T ss_pred             HCCCCCEEEEcccccccc
Confidence            999999999999998873

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=99.32  E-value=1.3e-10  Score=115.98  Aligned_cols=92  Identities=20%  Similarity=0.147  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      ..+|+.+|+++||+++|++++|||.+++++... +........++..+|+++.+  +..++.+|++++.++..|...|++
T Consensus        27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~--~~~v~~~c~sg~~ai~~A~~~I~s  104 (398)
T PRK06157         27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIP--VTRVENFCATGSEAFRGAVYAVAS  104 (398)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCC--EEEEecccHHHHHHHHHHHHHHHC
Confidence            679999999999999999999999999876543 21122236688899998643  778999999999999999999999


Q ss_pred             CCCCeEEEEEeccCc
Q 044410          188 NPGARVLVVCSDIRV  202 (402)
Q Consensus       188 g~~~~vLvv~~e~~s  202 (402)
                      |..+.|||+++|++|
T Consensus       105 G~~d~vlv~G~e~~s  119 (398)
T PRK06157        105 GAYDIALALGVEKLK  119 (398)
T ss_pred             CCCCEEEEEEEeecc
Confidence            999999999999865

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=99.31  E-value=1.8e-10  Score=115.93  Aligned_cols=92  Identities=17%  Similarity=0.095  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHH-HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGAD-VRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a-~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      ..+|+.+|+++||+++|++++|||.+++++... ......+ ..++..||++..+  +..+..+|+++..++..|...|+
T Consensus        37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~--~~~v~~~~aSg~~ai~~A~~~I~  114 (430)
T PRK06365         37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKP--SKRIEGGGATGGLAFQAGYEEIA  114 (430)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCc--eEEEeCCcHHHHHHHHHHHHHHH
Confidence            679999999999999999999999988765433 2222333 3467999998754  78899999999999999999999


Q ss_pred             cCCCCeEEEEEeccCc
Q 044410          187 NNPGARVLVVCSDIRV  202 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s  202 (402)
                      +|.++.|||+++|++|
T Consensus       115 sG~~~~vLv~G~e~~s  130 (430)
T PRK06365        115 SGRMDCVAVYGFETMS  130 (430)
T ss_pred             cCCCCEEEEEEeeecc
Confidence            9999999999999764

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=99.31  E-value=8.2e-11  Score=116.82  Aligned_cols=95  Identities=7%  Similarity=-0.037  Sum_probs=80.8

Q ss_pred             hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      ++.+|+.+|++++|++ +|+++++||.+++++... .. .+..+..+....|++... +++.++.+|++++.|+..|.+.
T Consensus        24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~-p~~tV~~~CaSG~~Ai~~Aa~~  102 (385)
T TIGR02445        24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS-AAVTVNRLCGSSMQALHDAARA  102 (385)
T ss_pred             CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc-chhhhhhhhHHHHHHHHHHHHH
Confidence            3789999999999996 599999999999997754 22 344666666678888644 3789999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |++|..+.+|+++.|++|.
T Consensus       103 I~sG~~d~vlagG~E~ms~  121 (385)
T TIGR02445       103 IMTGDADVCLVGGVEHMGH  121 (385)
T ss_pred             HHCCCCCEEEEeeehhccc
Confidence            9999999999999999873

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=99.27  E-value=8.6e-10  Score=109.20  Aligned_cols=230  Identities=17%  Similarity=0.024  Sum_probs=142.4

Q ss_pred             hHHHHHHHHHHHHHHHcC-CCC-CCccEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWG-QPV-SKITHLIFSAFYGV-DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag-~~~-~dId~li~~s~~~~-~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|+++||+++| +++ +|||.+++++...+ ........++..||+...+  .+.+   |+++..++..|...
T Consensus        24 s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~--~~~v---~~sg~~a~~~A~~a   98 (385)
T PRK06066         24 SFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRP--TMTV---AGDGLQGLAHAVMH   98 (385)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCC--eEEE---eCcHHHHHHHHHHH
Confidence            378999999999999999 997 79999987542111 1112234577889985443  3444   88999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc--c------------cCC-------------------------------------------
Q 044410          185 AENNPGARVLVVCSDIRVL--D------------FHE-------------------------------------------  207 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~--~------------~~~-------------------------------------------  207 (402)
                      |++|.+++|||++.|+++.  .            |..                                           
T Consensus        99 V~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~N  178 (385)
T PRK06066         99 INSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSN  178 (385)
T ss_pred             HHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcC
Confidence            9999999999999986532  0            100                                           


Q ss_pred             CC----c-cchh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCc
Q 044410          208 PS----E-THLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMG  270 (402)
Q Consensus       208 ~~----~-~~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g  270 (402)
                      |.    . -+.+            ....+...+|||+|+||.+.+...........+.+.+...-...   .    ..  
T Consensus       179 P~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv~I~g~g~~~~~~~---~----~~--  249 (385)
T PRK06066        179 PRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPVWIKGIGWSTESSN---L----ET--  249 (385)
T ss_pred             ChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCCcc---c----cc--
Confidence            10    0 0000            11234466899999999876431111111234544332210000   0    00  


Q ss_pred             eEEEeCCchhHHHHHhHHHHHHHhhccCCCC--CCcce-EEEEcCCCHHHHHHHHHHcCCCc--cc--------------
Q 044410          271 TYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS--DWNSL-FYVVHPGGDGLLDQVEKTLGLRK--EK--------------  331 (402)
Q Consensus       271 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~H~~~~~~~~~~~~~lgi~~--ek--------------  331 (402)
                            .++..  ........+++++++|++  + +|| .+-+|-.-....-...+.||+.+  |.              
T Consensus       250 ------~~~~~--~~~~~~Aa~~a~~~AGi~~p~-~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~  320 (385)
T PRK06066        250 ------AELGK--ANYMRIAADMAYKMAGIESPR-KEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGE  320 (385)
T ss_pred             ------ccccc--cHHHHHHHHHHHHHcCCCCCH-HHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCC
Confidence                  00000  111235778999999998  5 888 88888776666667788999876  32              


Q ss_pred             cHHHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410          332 LWASR-YVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       332 ~~~~~-~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      ++.|. -=+-.+||...++-+..+.++..+
T Consensus       321 ~PvN~~GG~la~Ghp~gatG~~~v~e~~~Q  350 (385)
T PRK06066        321 LPVNPSGGHLAKGVPLEASGLSLLLDAVEY  350 (385)
T ss_pred             ccccCCCchhcCCCccchhHHHHHHHHHHH
Confidence            12210 001237999888888888877764

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=99.25  E-value=4.3e-10  Score=112.43  Aligned_cols=254  Identities=14%  Similarity=0.100  Sum_probs=160.4

Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C--------------------------CCC-CHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V--------------------------DMP-GADVRL  151 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~--------------------------~~p-~~a~~i  151 (402)
                      ++.+....|+..|+++||+++|+++.+.+    .|+++++.+ .                          .++ ..+.+|
T Consensus        66 ~~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i  145 (406)
T PRK07967         66 RFMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACL  145 (406)
T ss_pred             hcCCHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHH
Confidence            33445678999999999999998754332    345554311 0                          111 367889


Q ss_pred             HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----c-----------------CCCCc
Q 044410          152 MRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F-----------------HEPSE  210 (402)
Q Consensus       152 ~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----~-----------------~~~~~  210 (402)
                      +..+|++..   .+.+..+|++++.||..|.++|++|..+.+||.++|..+..    |                 ..|.|
T Consensus       146 s~~~~l~Gp---~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd  222 (406)
T PRK07967        146 ATPFKIKGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYD  222 (406)
T ss_pred             HHHHCCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCc
Confidence            999999975   57899999999999999999999999999999999864311    0                 01333


Q ss_pred             cchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHH
Q 044410          211 THLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDK  289 (402)
Q Consensus       211 ~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~  289 (402)
                      .++    ..++.|+||+++||++.+... .......++.+.+..              .++.++. .+.     ...+.+
T Consensus       223 ~~r----~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~--------------~d~~~~~-~p~-----~~~~~~  278 (406)
T PRK07967        223 ANR----DGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGAT--------------SDGYDMV-APS-----GEGAVR  278 (406)
T ss_pred             CCC----CceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEC--------------CCCCCCC-CCC-----HHHHHH
Confidence            222    367999999999999754411 111112244443321              1111110 111     334567


Q ss_pred             HHHHhhccCCCCCCcce-EEEEcCCCHH-----HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH---HHh
Q 044410          290 CLSNAMSPIGISDWNSL-FYVVHPGGDG-----LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV---RKK  360 (402)
Q Consensus       290 ~i~~~L~~~gl~~~~di-~~i~H~~~~~-----~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~---~~~  360 (402)
                      +|+++|+..+    .+| ++..|-.+..     -.+.+.+.+|-.  ..+.+ .+-..+||+.+|+-.+.+...   +++
T Consensus       279 a~~~Al~~~~----~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~--~~~v~-s~K~~~GH~~~AaG~~e~i~~~lal~~  351 (406)
T PRK07967        279 CMQMALATVD----TPIDYINTHGTSTPVGDVKELGAIREVFGDK--SPAIS-ATKSLTGHSLGAAGVQEAIYSLLMMEH  351 (406)
T ss_pred             HHHHHHhCCC----CCccEEEcCCCCCCCCCHHHHHHHHHHhCCC--CCeeE-CcccccccCccccchHHHHHHHHHHhc
Confidence            8888887643    377 9999976543     345566777632  22222 124578999988877655332   222


Q ss_pred             hhhhhcccC---------C-------------CCCceEEEEEEcccccceeeEEeee
Q 044410          361 SIEEMKATT---------G-------------EGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       361 ~~~~g~i~~---------G-------------~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                          +.+.|         .             .+.++++..+||-|.+-.+++|+..
T Consensus       352 ----~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~  404 (406)
T PRK07967        352 ----GFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY  404 (406)
T ss_pred             ----CcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence                22211         0             0125688899999999999999864

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=99.24  E-value=5.9e-10  Score=114.02  Aligned_cols=260  Identities=15%  Similarity=0.102  Sum_probs=159.2

Q ss_pred             HHHHHHHHHHHHHHHcCCC--CCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQP--VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~--~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      ..+|+.+|+++||+++|++  ++|||.+++++............++.+||+.+..  ......||+++..++..|...|+
T Consensus        27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~--~~~~~~GG~s~~~~v~~Aa~~Ia  104 (498)
T PRK08257         27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPAR--TVYSPVGGNSPQRLVNEAALRIA  104 (498)
T ss_pred             HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcc--eeEecCCCHHHHHHHHHHHHHHH
Confidence            6799999999999999999  9999999887553322233457899999997654  44466788899999999999999


Q ss_pred             cCCCCeEEEEEeccCccc--cC-------------------------------------CCC------------------
Q 044410          187 NNPGARVLVVCSDIRVLD--FH-------------------------------------EPS------------------  209 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~~--~~-------------------------------------~~~------------------  209 (402)
                      +|.++.|||+++|+++..  +.                                     .|.                  
T Consensus       105 sG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~yal~a~ay~~~~G~t~  184 (498)
T PRK08257        105 AGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVYPLFENALRAALGRSP  184 (498)
T ss_pred             CCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHHHHHHHHHHHHhCcCH
Confidence            999999999999985421  00                                     000                  


Q ss_pred             -c---------------------------cchhhhh----------------hhh-hhccCcEEEEEccCCCCC--CCC-
Q 044410          210 -E---------------------------THLDVLV----------------VQA-VFGDGAGAAIIGADSDIS--NHE-  241 (402)
Q Consensus       210 -~---------------------------~~~~~~~----------------~~~-lfGDGAaA~vL~~~~~~~--~~~-  241 (402)
                       +                           -+.++..                .++ ...|||+|+||.+.+...  ++. 
T Consensus       185 e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~  264 (498)
T PRK08257        185 EEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPE  264 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEEEEeeHHHHHhcCCCC
Confidence             0                           0000000                011 256777777666543200  000 


Q ss_pred             CCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH
Q 044410          242 SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ  320 (402)
Q Consensus       242 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~  320 (402)
                      .....+.+.+....+.     .+          ..+.-+. .......+.+++++++|+++ +|| .+=+|-.-......
T Consensus       265 ~~~V~i~g~a~~~~~~-----~~----------~~r~~~~-~~~~~~~aa~~a~~~AGi~~-~Did~~elydcF~~~~~~  327 (498)
T PRK08257        265 DRWVYLHGGADAHDPY-----DI----------LERPDLH-RSPAIRAAGRRALALAGLGI-DDIDAFDLYSCFPSAVQV  327 (498)
T ss_pred             CceEEEEEEEEeeCcc-----cc----------ccccccc-cChHHHHHHHHHHHHhCCCH-HHCCEEEeccCCHHHHHH
Confidence            0011222221110000     00          0010010 01223457789999999997 999 88888877666777


Q ss_pred             HHHHcCCCcc-ccHHH-HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccc-eeeEEee
Q 044410          321 VEKTLGLRKE-KLWAS-RYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTV-ETVVLQS  394 (402)
Q Consensus       321 ~~~~lgi~~e-k~~~~-~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~-~~~ll~~  394 (402)
                      ..+.||+.++ +.+.| ---+..+||.+.++-+..+.++.++.-  |  +++   .+.|..+.|.-++. ...+|..
T Consensus       328 ~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLR--g--~~~---~~gLv~~~GG~~~~~~~~vl~~  397 (498)
T PRK08257        328 AARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLR--A--NPG---RRGLVTANGGYLTKHSVGVYST  397 (498)
T ss_pred             HHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHh--h--cCC---CEEEEECCCChhhceEEEEEeC
Confidence            7899999866 22322 012446899999998888888877511  1  133   67777776653342 3334433

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=99.24  E-value=6.1e-10  Score=110.60  Aligned_cols=228  Identities=15%  Similarity=0.089  Sum_probs=146.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN  188 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g  188 (402)
                      ..+|+.+|+++||+++|++++|||.++..+..+..   ....++..||+...+  ...+..+|+++..++..|...|++|
T Consensus        25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~---~~~~~~~~lGl~~~~--~~~v~~gg~s~~~a~~~A~~~I~sG   99 (388)
T PRK08142         25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL---GPASMVDYLGLKLRH--VDSTETGGSSYLAHVGHAAQAIAAG   99 (388)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc---cHHHHHHhCCCCCee--eccccCCcHHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999997652211111   124588999997643  6778899999999999999999999


Q ss_pred             CCCeEEEEEeccCccc------------------cCC------------------------------------------C
Q 044410          189 PGARVLVVCSDIRVLD------------------FHE------------------------------------------P  208 (402)
Q Consensus       189 ~~~~vLvv~~e~~s~~------------------~~~------------------------------------------~  208 (402)
                      .++.|||++.|+.+..                  |..                                          |
T Consensus       100 ~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP  179 (388)
T PRK08142        100 KCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNP  179 (388)
T ss_pred             CCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCC
Confidence            9999999999874310                  000                                          0


Q ss_pred             Cc-----cchh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCce
Q 044410          209 SE-----THLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGT  271 (402)
Q Consensus       209 ~~-----~~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~  271 (402)
                      .-     -+.+            .+..+...+|||+|+||.+.+.......+...+.+.+....+..     .. +    
T Consensus       180 ~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~v~I~g~~~~~~~~~-----~~-~----  249 (388)
T PRK08142        180 HAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKRPLVKVLGAGEAIKGQM-----GG-K----  249 (388)
T ss_pred             hhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcCCCCEEEEEEEEecCCcc-----cc-C----
Confidence            00     0000            01122355899999999876431111112345554433211100     00 0    


Q ss_pred             EEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-----------------ccH
Q 044410          272 YCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-----------------KLW  333 (402)
Q Consensus       272 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-----------------k~~  333 (402)
                           +++.   ......+++++++++|+++ +|| .+-+|-.-....-...+.||+.+.                 +++
T Consensus       250 -----~~~~---~~~~~~aa~~a~~~AGi~~-~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~lP  320 (388)
T PRK08142        250 -----VDLT---YSGAAWSGPAAFAEAGVTP-ADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKLP  320 (388)
T ss_pred             -----cccc---cHHHHHHHHHHHHHcCCCH-HHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCcc
Confidence                 1111   1122467889999999997 999 888887665565666788998432                 222


Q ss_pred             HHH-HHHHhcCCCCcchHHHHHHHHHHh
Q 044410          334 ASR-YVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       334 ~~~-~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      .|. -=+...||...|+-+..+.++..+
T Consensus       321 vN~sGG~l~~G~p~gatG~~~~~E~~~Q  348 (388)
T PRK08142        321 FNTDGGGLCNNHPANRGGMTKVIEAVRQ  348 (388)
T ss_pred             ccCCChhhcCCCcCcccHHHHHHHHHHH
Confidence            210 012336888888888888877765

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=99.24  E-value=7.7e-10  Score=102.72  Aligned_cols=245  Identities=18%  Similarity=0.190  Sum_probs=135.5

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +.-..|..+|++.||++++++++|||.++.+--..+..  .+++.++.|+++     ++-+-.+|+++..+|.+|+.++.
T Consensus        49 kAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~iP-----f~GlygACST~~e~l~laa~~vd  121 (329)
T PF07451_consen   49 KAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGIP-----FLGLYGACSTMMESLALAAMLVD  121 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT-------EEEB--CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCCC-----ccchhhHHHHHHHHHHHHHHHHh
Confidence            34678999999999999999999999988766544444  458899999987     67899999999999999999999


Q ss_pred             cCCCCeEEEEEeccCc---cccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCccccc
Q 044410          187 NNPGARVLVVCSDIRV---LDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYIS  263 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s---~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  263 (402)
                      .|-+++||+.++....   +.|+.|.+...+...+..+---||+|+||++.+. .    +...-...+.        .++
T Consensus       122 gg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~-~----p~It~~T~Gk--------VvD  188 (329)
T PF07451_consen  122 GGFADYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGS-G----PRITHATIGK--------VVD  188 (329)
T ss_dssp             TTS-SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS---S----EEEEEEE------------B-
T ss_pred             CCCcceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCC-C----cEEEEEEEEE--------EEE
Confidence            9999999999988775   3466565432233334556668999999998765 1    1222221111        111


Q ss_pred             ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc---CCCHHHHHHHHHHcCCCccccHHHHHH-
Q 044410          264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH---PGGDGLLDQVEKTLGLRKEKLWASRYV-  338 (402)
Q Consensus       264 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H---~~~~~~~~~~~~~lgi~~ek~~~~~~~-  338 (402)
                      +.+.+       ..+.=..+.......|.+.|++.|.++ +|. .++.-   ..++.++..+.++-|++.++.+...-. 
T Consensus       189 ~G~~D-------~~nMGaAMAPAA~dTI~~h~~D~g~~p-~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG~~  260 (329)
T PF07451_consen  189 MGIKD-------PNNMGAAMAPAAADTIEQHFKDTGRSP-DDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCGLM  260 (329)
T ss_dssp             SS----------TT-HHHHHHHHHHHHHHHHHHHCT--G-GG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHHHC
T ss_pred             cCCCC-------cccchhhHhHHHHHHHHHHHHHhCCCh-hhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCCeE
Confidence            11111       011112334445567888899999997 887 55543   246788899999888887663221100 


Q ss_pred             -H----Hh--cCCCCcc-hHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEccccc
Q 044410          339 -L----RE--YGNMGAP-SVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLT  386 (402)
Q Consensus       339 -l----~~--~Gn~~sa-si~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~  386 (402)
                       +    ++  -|-.|++ |..+...+++++      ++.| ...+||+++.|+=++
T Consensus       261 iyd~~~Qdv~aGGSGcgCSA~V~~g~ll~~------l~~g-~~krvL~vaTGALlS  309 (329)
T PF07451_consen  261 IYDPEKQDVHAGGSGCGCSAVVLCGYLLPK------LRKG-ELKRVLFVATGALLS  309 (329)
T ss_dssp             SS-TT-S--TT-EESHHHHHHHHHHCHHHH------HHTT-S-SEEEEEEEEE---
T ss_pred             eecCCccccccCCCCcchHHHHHHHHHHHH------HHcC-CceEEEEEEchhhcC
Confidence             0    01  1222322 223333344443      3333 136899999998443

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.22  E-value=2.7e-10  Score=112.97  Aligned_cols=267  Identities=15%  Similarity=0.144  Sum_probs=166.0

Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCCC-CCCcc---EEEEEecC-----------------------CC----CCC-C
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQP-VSKIT---HLIFSAFY-----------------------GV----DMP-G  146 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~-~~dId---~li~~s~~-----------------------~~----~~p-~  146 (402)
                      ..+.+++.+....|+..|+++||+++|++ ..+++   .+++++..                       |+    .++ .
T Consensus        61 ~~~~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  140 (412)
T COG0304          61 AKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNL  140 (412)
T ss_pred             chHHhhcccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccch
Confidence            55555678889999999999999999997 33343   23344331                       11    122 3


Q ss_pred             HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC---------------ccc------c
Q 044410          147 ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR---------------VLD------F  205 (402)
Q Consensus       147 ~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~---------------s~~------~  205 (402)
                      .+..++..+|+...   .+.+..+|+++.+|+..|.++|+.|..+.+|+.++|..               +..      .
T Consensus       141 ~a~~vs~~~g~~G~---~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~a  217 (412)
T COG0304         141 AAGNVAIVFGLKGP---NYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKA  217 (412)
T ss_pred             HHHHHHHHhCCCCC---cCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCcccc
Confidence            46788999999975   57889999999999999999999999999999999762               111      2


Q ss_pred             CCCCccchhhhhhhhhhccCcEEEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHH
Q 044410          206 HEPSETHLDVLVVQAVFGDGAGAAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIG  284 (402)
Q Consensus       206 ~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~  284 (402)
                      .+|.|.++    ..+++|.||+++||+..+.... ......++.+.+..              .++++++...  +  -.
T Consensus       218 srPfd~~R----dGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~--------------~Da~h~t~P~--p--~g  275 (412)
T COG0304         218 SRPFDKNR----DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTT--------------SDAYHITAPA--P--DG  275 (412)
T ss_pred             CCCCCCCC----CCEEEecceeEEEecChhhHHhCCCceEEEEEEEEec--------------ccccccCCCC--C--CC
Confidence            23444333    3789999999999998765111 11112344443321              1111111100  0  12


Q ss_pred             HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHH-----HHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410          285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLL-----DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVR  358 (402)
Q Consensus       285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~-----~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~  358 (402)
                      ....++|+.+|+++|+++ ++| |+..|-.+...-     ..+.+.++--..+++.+ .+-.-+||+-.|.-.+-+.-.+
T Consensus       276 ~Ga~~am~~AL~~Agl~~-~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vs-stKs~tGH~lGAaGaveai~~~  353 (412)
T COG0304         276 EGAIRAMRAALADAGLTP-EDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVS-STKSLTGHTLGAAGAVEAIISL  353 (412)
T ss_pred             chHHHHHHHHHHHcCCCH-hHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceee-ecccccccChhhHHHHHHHHHH
Confidence            234478899999999998 999 999998765443     34455566322222221 1244578876665443322211


Q ss_pred             HhhhhhhcccC-----------------------CCCCceEEEEEEcccccceeeEEee
Q 044410          359 KKSIEEMKATT-----------------------GEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       359 ~~~~~~g~i~~-----------------------G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .. +.+|.+.|                       .. .+.+|.-+||-|.+-++++++.
T Consensus       354 l~-l~~g~ippt~n~~~~dp~~~~l~~v~~~~~~~~-~~~~lsnsfGFGG~Na~lv~~~  410 (412)
T COG0304         354 LA-LRDGIIPPTINLDNPDPEAADLDVVPNEARTGA-VRAALSNSFGFGGTNASLVFKR  410 (412)
T ss_pred             HH-HhcCCcCCCCCcCCCCcccccccccCCcccccc-eeEEEecccccCCcceEEEEec
Confidence            10 00011110                       00 1557778899988888888775

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.16  E-value=1.9e-09  Score=127.00  Aligned_cols=221  Identities=13%  Similarity=0.115  Sum_probs=141.7

Q ss_pred             HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----CCCCc
Q 044410          147 ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----HEPSE  210 (402)
Q Consensus       147 ~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----~~~~~  210 (402)
                      .+++|+..||+.+.   .+.+..+|+|++.||++|.+.|++|.++.+|+.+++.....           +     ..|.|
T Consensus       185 ~A~RIS~~f~L~Gp---s~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD  261 (2582)
T TIGR02813       185 ISGRIANRFDLGGM---NCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD  261 (2582)
T ss_pred             HHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence            57899999999985   67899999999999999999999999999999998763210           0     12333


Q ss_pred             cchhhhhhhhhhccCcEEEEEccCCCCCCCCCCce-EEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHH
Q 044410          211 THLDVLVVQAVFGDGAGAAIIGADSDISNHESPLF-QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDK  289 (402)
Q Consensus       211 ~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~  289 (402)
                      .+.    .++++|+|++++||.+-+......+..+ .+.+.+..              .+|....+  ..+.  .....+
T Consensus       262 ~~a----dG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~--------------~DG~~~~i--taP~--~~gq~~  319 (2582)
T TIGR02813       262 IDS----KGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGAS--------------SDGKFKSI--YAPR--PEGQAK  319 (2582)
T ss_pred             CCC----CcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEc--------------CCCCCCCC--cCCC--HHHHHH
Confidence            222    3789999999999997654111111122 33333221              11110000  0111  223457


Q ss_pred             HHHHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc---cccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410          290 CLSNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK---EKLWASRYVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       290 ~i~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~---ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      +|+++|+++|+++ ++| |+-.|..+...     ...+.+.++-..   ..++.+ .+-..+||+.+|+-...|-..+-.
T Consensus       320 ~i~~Al~~Agi~p-~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vg-SvKs~iGH~~~AAG~a~lik~~la  397 (2582)
T TIGR02813       320 ALKRAYDDAGFAP-HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALG-SVKSQIGHTKSTAGTAGMIKAVLA  397 (2582)
T ss_pred             HHHHHHHHcCCCH-HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceee-ccccccccchHhHHHHHHHHHHHH
Confidence            8999999999998 999 99999865433     556677776432   123322 134588999999887777543311


Q ss_pred             hhhhhcccC-------------------------------CCCCceEEEEEEcccccceeeEEeee
Q 044410          361 SIEEMKATT-------------------------------GEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       361 ~~~~g~i~~-------------------------------G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                       +.+|.+.+                               .....++++-+||-|.+-..++|+-.
T Consensus       398 -l~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~  462 (2582)
T TIGR02813       398 -LHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY  462 (2582)
T ss_pred             -HhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence             00022211                               00125688889999999999999853

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.15  E-value=1.5e-10  Score=116.59  Aligned_cols=95  Identities=13%  Similarity=0.042  Sum_probs=84.0

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.||+++.++ ...+..+..++..+|++.... .++++.+|++++.++..|.++|+
T Consensus        26 ~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p-~~~v~~~CaSg~~al~~A~~~I~  104 (426)
T PRK08170         26 SASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVP-AWTVQRNCASGMQALDSAAANIA  104 (426)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCce-eeeccchhhHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999988765 334677888999999964322 78999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|..++|||+++|++|.
T Consensus       105 sG~~d~vLv~G~E~ms~  121 (426)
T PRK08170        105 LGRADLVLAGGVEAMSH  121 (426)
T ss_pred             CCCCCEEEEEEEecccC
Confidence            99999999999998774

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=99.13  E-value=2.1e-10  Score=108.18  Aligned_cols=95  Identities=18%  Similarity=0.119  Sum_probs=83.2

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      ++.+|+.+|++.+|+++++++++||.|++++..+ ...+..+..+.-..|++.... ++.++..|+|++.|+..|...|+
T Consensus        25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp-~~~V~~~CaSG~~Av~~a~~~I~  103 (264)
T PF00108_consen   25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP-ATTVNRACASGLQAVHLAAMAIA  103 (264)
T ss_dssp             -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE-EEEEE-GGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc-eeeehhhhhHHHHHHHHhhhhhc
Confidence            4889999999999999999999999999999988 456778888888999986643 88999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|..+.+|++++|++|.
T Consensus       104 sG~~dvvlagGvE~mS~  120 (264)
T PF00108_consen  104 SGEADVVLAGGVESMSR  120 (264)
T ss_dssp             TTS-SEEEEEEEEETTT
T ss_pred             CCCccEEEEeccccccc
Confidence            99999999999999995

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>PRK07855 lipid-transfer protein; Provisional

Probab=99.04  E-value=1.9e-08  Score=100.06  Aligned_cols=85  Identities=18%  Similarity=0.157  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN  188 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g  188 (402)
                      ..+|+.+|+++||+++|++++|||.+++.+. . ..+.  ..+++.||+.+.. ....+..+|+++..++..|...|++|
T Consensus        24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~~--~~l~~~lGl~~~~-~~~~v~~gg~sg~~~~~~A~~~I~sG   98 (386)
T PRK07855         24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNPE--IAVARALGIGELK-FFSRIHYGGGAACATVQQAAMAVATG   98 (386)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cccH--HHHHHHCCCCCCc-ceeeecCCcHHHHHHHHHHHHHHHCC
Confidence            6799999999999999999999999986332 1 2222  5688999997622 15678999999999999999999999


Q ss_pred             CCCeEEEEEe
Q 044410          189 PGARVLVVCS  198 (402)
Q Consensus       189 ~~~~vLvv~~  198 (402)
                      .++.|||++.
T Consensus        99 ~~d~vLv~g~  108 (386)
T PRK07855         99 VADVVVCYRA  108 (386)
T ss_pred             CCCEEEEEee
Confidence            9999999987

>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=98.96  E-value=1.6e-09  Score=100.53  Aligned_cols=94  Identities=18%  Similarity=0.109  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      +.+|+.-|++.+|+++.++++|++-||+++..+ ...-.++.+.+---||+..+. +..++..|++++.|+.+|.+-|+.
T Consensus        30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~-~tTvNkvCaSgmKAv~laaQsI~~  108 (396)
T KOG1390|consen   30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVP-ATTVNKVCASGMKAVILAAQSIQT  108 (396)
T ss_pred             hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCccee-eEeehhhhhhhHHHHHHHHHHHhc
Confidence            789999999999999999999999999998877 666677888888889998765 889999999999999999999999


Q ss_pred             CCCCeEEEEEeccCcc
Q 044410          188 NPGARVLVVCSDIRVL  203 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~  203 (402)
                      |..+.|+..+.|.+|.
T Consensus       109 G~~divVaGGmEsMS~  124 (396)
T KOG1390|consen  109 GHADIVVAGGMESMSN  124 (396)
T ss_pred             CCccEEEecccchhcc
Confidence            9999999999999873

>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.93  E-value=2.6e-09  Score=100.73  Aligned_cols=221  Identities=16%  Similarity=0.174  Sum_probs=141.1

Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCC---Ccc----EEEEEec----------------------CCCCCC----
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVS---KIT----HLIFSAF----------------------YGVDMP----  145 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~---dId----~li~~s~----------------------~~~~~p----  145 (402)
                      .....+.......|+..|+++||+++++.+.   +.|    .|.++++                      +|+++|    
T Consensus        84 s~~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~  163 (440)
T KOG1394|consen   84 SKGDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILT  163 (440)
T ss_pred             chhhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhc
Confidence            3445555667899999999999999998654   233    4455544                      344455    


Q ss_pred             -CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc--------------------
Q 044410          146 -GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD--------------------  204 (402)
Q Consensus       146 -~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~--------------------  204 (402)
                       ..+.+|+.++|+...   -..++.+|+++.+++--|..+|+.|..+..|..++|.+-..                    
T Consensus       164 NM~ag~vsm~~gl~Gp---nhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~  240 (440)
T KOG1394|consen  164 NMAAGYVSMKYGLRGP---NHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQ  240 (440)
T ss_pred             ccccchhhhhhcCcCC---chhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCcc
Confidence             346899999999875   57789999999999999999999999999999988876210                    


Q ss_pred             -cCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCC-ceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHH
Q 044410          205 -FHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESP-LFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVA  282 (402)
Q Consensus       205 -~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~  282 (402)
                       ..+|.|.+|+    .+++|+|++.+||+.-+.......+ ..++++.+-              ..+.++++-..  +  
T Consensus       241 ~aSRPfD~~Rd----GFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygl--------------s~Da~HiT~P~--~--  298 (440)
T KOG1394|consen  241 KASRPFDKKRD----GFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL--------------SSDAYHITSPD--P--  298 (440)
T ss_pred             ccCCCCccCCC----ceeeccceeEEehHhHHHHHHcCCceeHHhhcCcc--------------cccccccCCCC--C--
Confidence             1124444343    7899999999999876541110011 122322211              00111111100  0  


Q ss_pred             HHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccc--cHHHHHHHHhcCCCCcc
Q 044410          283 IGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEK--LWASRYVLREYGNMGAP  348 (402)
Q Consensus       283 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek--~~~~~~~l~~~Gn~~sa  348 (402)
                      -......+|+++|+.+|+++ +|| |+-.|..+...     .+++.+.|+--...  +..+   -.-.||+-.|
T Consensus       299 dG~Ga~~am~raL~~Agl~p-e~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsSt---KgaiGHLLGA  368 (440)
T KOG1394|consen  299 DGAGAVLAMERALKDAGLSP-EDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSST---KGAIGHLLGA  368 (440)
T ss_pred             CcchHHHHHHHHHHHcCCCh-hhcCeeecccccCcCchHHHHHHHHHHhccCCcccccccc---cchhhhhccc
Confidence            01234468889999999998 999 99999765443     44556666543333  3222   3455665433

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=98.87  E-value=1.1e-08  Score=103.06  Aligned_cols=94  Identities=16%  Similarity=0.186  Sum_probs=79.4

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCC--ccEEEEEecCC-C--CCCCHHHHHHHHcCCC-------CccccceeeccccchHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSK--ITHLIFSAFYG-V--DMPGADVRLMRLLGLK-------PSVNRLMIYTQGCYMGG  175 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~d--Id~li~~s~~~-~--~~p~~a~~i~~~LGl~-------~~~~~~~~i~~~C~~~~  175 (402)
                      +..+|+.+|+++||+++|++++|  ||.+++++... .  ..+..+..++..+|++       ..+  .+.++.+|++++
T Consensus        47 s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p--~~~V~~~caSG~  124 (438)
T PTZ00455         47 TLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKP--AMRVEGACASGG  124 (438)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCc--eeEEECcCHHHH
Confidence            47899999999999999999999  99999987654 2  2355667777665554       443  789999999999


Q ss_pred             HHHHHHHHHHHcCCCCeEEEEEeccCcc
Q 044410          176 TVIRLAKDIAENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       176 ~al~~A~~~i~~g~~~~vLvv~~e~~s~  203 (402)
                      .|+..|.+.|++|.++.|||+++|++|.
T Consensus       125 ~Ai~~A~~~I~sG~~dvvlv~G~E~ms~  152 (438)
T PTZ00455        125 LAVQSAWEALLAGTSDIALVVGVEVQTT  152 (438)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence            9999999999999999999999998764

>PRK07937 lipid-transfer protein; Provisional

Probab=98.84  E-value=3.6e-07  Score=89.64  Aligned_cols=240  Identities=14%  Similarity=0.002  Sum_probs=138.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCC-CCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410          110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDM-PGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN  188 (402)
Q Consensus       110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~-p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g  188 (402)
                      .+|+.+|+++||+++|++++|||.++.++...... ......+...+|+..... ...+.   +++..++..|...|++|
T Consensus        25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~v~---~~g~~a~~~A~~aI~sG  100 (352)
T PRK07937         25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPIN-ESHVE---MDAAWALYEAWVKLLTG  100 (352)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCc-eEEec---CcHHHHHHHHHHHHhcC
Confidence            79999999999999999999999885433211211 111234556678743211 23333   46888999999999999


Q ss_pred             CCCeEEEEEeccCcc------------c-cCCCCc----------------------c----------------------
Q 044410          189 PGARVLVVCSDIRVL------------D-FHEPSE----------------------T----------------------  211 (402)
Q Consensus       189 ~~~~vLvv~~e~~s~------------~-~~~~~~----------------------~----------------------  211 (402)
                      .++.|||++.|+++.            . +..|..                      +                      
T Consensus       101 ~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r  180 (352)
T PRK07937        101 EVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS  180 (352)
T ss_pred             CCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc
Confidence            999999999997541            0 100000                      0                      


Q ss_pred             -chh------------hhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCc
Q 044410          212 -HLD------------VLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRD  278 (402)
Q Consensus       212 -~~~------------~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~  278 (402)
                       +.+            .+..+...+|||+|+||.+.+...........+.+.+....+..   +    .        .++
T Consensus       181 it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~pv~I~g~~~~~~~~~---~----~--------~~d  245 (352)
T PRK07937        181 ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERPAWITGIEHRIESPS---L----G--------ARD  245 (352)
T ss_pred             CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCcEEEEEEEEeeCCcc---c----c--------ccc
Confidence             000            01122345899999999875431111111244544433211110   0    0        011


Q ss_pred             hhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-ccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410          279 VPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-KLWASRYVLREYGNMGAPSVFFILDE  356 (402)
Q Consensus       279 v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-k~~~~~~~l~~~Gn~~sasi~i~L~~  356 (402)
                      +..  ....+.+.+++   +|+++ +|| .+=+|-......-...+.||+..+ .+..+=-.+.  ||-..++-+..+.+
T Consensus       246 ~~~--~~~~~~a~~~a---Agi~~-~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l~--ghp~gatG~~~~~e  317 (352)
T PRK07937        246 LTR--SPSTALAAEAA---TGGDA-GGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGALA--ANPMFAAGLERIGE  317 (352)
T ss_pred             ccc--HHHHHHHHHHh---cCCCH-HHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccchh--cCchhHHHHHHHHH
Confidence            111  11122233333   69997 999 888888776666677899998532 3332211232  88777777778888


Q ss_pred             HHHhhhhhhcccCCCCCceEEEEEEcc
Q 044410          357 VRKKSIEEMKATTGEGLECGVLFGFGP  383 (402)
Q Consensus       357 ~~~~~~~~g~i~~G~~~d~vll~~~G~  383 (402)
                      +..+      ++.+ ..++.|..+.|.
T Consensus       318 ~~~Q------L~g~-~a~~~l~~~~Gg  337 (352)
T PRK07937        318 AARH------IWDG-SARRALAHATSG  337 (352)
T ss_pred             HHHH------Hhcc-CCCEEEEecccc
Confidence            7765      2211 126777777664

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=98.83  E-value=2.3e-08  Score=93.66  Aligned_cols=132  Identities=21%  Similarity=0.248  Sum_probs=91.9

Q ss_pred             CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCc-----cEEEEEecCC-C---------------C--------CC-
Q 044410           96 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI-----THLIFSAFYG-V---------------D--------MP-  145 (402)
Q Consensus        96 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dI-----d~li~~s~~~-~---------------~--------~p-  145 (402)
                      +.+..+.....+....|+..|+.+||+++|++++++     -.|+++++.. +               .        +| 
T Consensus        74 ~~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  153 (254)
T PF00109_consen   74 FGIPPREARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPN  153 (254)
T ss_dssp             TCHHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred             ccccchhhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCccccc
Confidence            444555455666788999999999999999988533     2355555433 1               0        22 


Q ss_pred             CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEecc-Ccc---------ccC------CCC
Q 044410          146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI-RVL---------DFH------EPS  209 (402)
Q Consensus       146 ~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~-~s~---------~~~------~~~  209 (402)
                      ..+.+|+..+|+...   .+.+..+|++++.||..|..+|++|..+.|||.++|. .+.         ...      .|.
T Consensus       154 ~~a~~ia~~~gl~G~---~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf  230 (254)
T PF00109_consen  154 SAAGRIAILFGLRGP---SYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPF  230 (254)
T ss_dssp             HHHHHHHHHHTB-SS---EEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGST
T ss_pred             ccccchhhhcCCCCc---cccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccc
Confidence            257799999999986   5789999999999999999999999999999999994 321         000      122


Q ss_pred             ccchhhhhhhhhhccCcEEEEEccC
Q 044410          210 ETHLDVLVVQAVFGDGAGAAIIGAD  234 (402)
Q Consensus       210 ~~~~~~~~~~~lfGDGAaA~vL~~~  234 (402)
                      ++  .  ...+++|+||+++||++.
T Consensus       231 ~~--~--~~G~v~gEGa~~~vLe~~  251 (254)
T PF00109_consen  231 DP--F--ADGFVLGEGAGALVLERL  251 (254)
T ss_dssp             BT--T--B-SB-BB-EEEEEEEEEH
T ss_pred             CC--C--CCCEEEECceEEEEEEEh
Confidence            21  1  257899999999999864

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=98.74  E-value=5.3e-08  Score=98.03  Aligned_cols=95  Identities=11%  Similarity=-0.026  Sum_probs=79.6

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|++++|+++|++++|||.+++++..+ ...+..+..+.-..|++... +.+.++++|++++.++..|...|+
T Consensus        30 ~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~-p~~~V~~~CaSG~~ai~~A~~~I~  108 (427)
T PRK09268         30 SNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYT-PAYDLQQACGTGLEAAILVANKIA  108 (427)
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCC-ceeeeechhhHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999997654 22244566655566665422 278899999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|..+.+||++.|.+|.
T Consensus       109 sG~~d~vlvgG~E~ms~  125 (427)
T PRK09268        109 LGQIDSGIAGGVDTTSD  125 (427)
T ss_pred             CCCCCEEEEeeEEccCC
Confidence            99999999999999884

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.69  E-value=7.4e-07  Score=98.86  Aligned_cols=347  Identities=17%  Similarity=0.153  Sum_probs=197.9

Q ss_pred             CCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeeccc-----chhHhhhCCCCccCCC
Q 044410           21 GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL-----TEEILKENPNMCCYEA   95 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~-----~~~~~~~~~~~~~~~~   95 (402)
                      .| |-|+|++..+|. .-+.+++.+.+.+  ..+...++. ..+|=.+..+-..+....     ....++.-..+ +...
T Consensus         4 ~~-IAIiGm~~rfPg-a~~~~~~W~~l~~--g~~~i~~ip-~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~F-D~~f   77 (1061)
T COG3321           4 EP-IAIIGMACRFPG-ADSPEEFWDLLKE--GRDEITEVP-ADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDF-DALF   77 (1061)
T ss_pred             Cc-EEEEeccccCCC-CCCHHHHHHHHhc--CCceeeecC-hhhhhHhhccCCccccccccccccccccCCcccc-CHHH
Confidence            45 899999999999 6677888877642  111111110 012322222222221111     00000000000 0001


Q ss_pred             CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-CCCC-------------------CHHHHH
Q 044410           96 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-VDMP-------------------GADVRL  151 (402)
Q Consensus        96 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~~~p-------------------~~a~~i  151 (402)
                      =.+..|....++--..|..+.+.+||+++|+.++.+.    .|+.+.+.. |...                   ..+++|
T Consensus        78 FgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Ri  157 (1061)
T COG3321          78 FGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRI  157 (1061)
T ss_pred             cCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHH
Confidence            1233444555555666999999999999999998887    455555443 3111                   267899


Q ss_pred             HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----c-----CCCCcc--chhhhhhh
Q 044410          152 MRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F-----HEPSET--HLDVLVVQ  219 (402)
Q Consensus       152 ~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~-----~~~~~~--~~~~~~~~  219 (402)
                      +..|++.+.   ...+..+|++.+.|+++|.+.|.+|+++.+|+.+....-..     |     ..|+..  ..+.....
T Consensus       158 sy~l~l~GP---s~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG  234 (1061)
T COG3321         158 SYVLGLSGP---SVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADG  234 (1061)
T ss_pred             HHHhcCCCC---CccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCC
Confidence            999999975   67899999999999999999999999999998887664210     0     011100  00111236


Q ss_pred             hhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCC
Q 044410          220 AVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIG  299 (402)
Q Consensus       220 ~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g  299 (402)
                      ++.|.|++++||.+-.....-.+..+.++.. +..            ..+|...  |-..+.  ...-..+++++|+++|
T Consensus       235 ~v~geG~g~vvLKrl~~A~~dgd~IyavI~g-sav------------n~dG~~~--gltaP~--~~aQ~~v~~~al~~a~  297 (1061)
T COG3321         235 YVRGEGAGVVVLKRLSDAERDGDRIYAVIRG-SAV------------NQDGRSN--GLTAPN--LEAQADVIREALADAG  297 (1061)
T ss_pred             EEEeeeEEEEEEEEhHHHHhCCCeEEEEEEe-eee------------ccCCCcC--CCCCCC--HHHHHHHHHHHHHhcC
Confidence            7999999999998754411111222333211 110            1111100  111221  2345678999999999


Q ss_pred             CCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc-cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccC---
Q 044410          300 ISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK-EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT---  369 (402)
Q Consensus       300 l~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~-ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~---  369 (402)
                      +++ .+| |+=.|..+..+     +..+.+.++-.. +....--.+-.+.||+.+|.-...|-...-. +..+.+.+   
T Consensus       298 i~p-~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~La-l~~~~ip~~l~  375 (1061)
T COG3321         298 IDP-ATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALA-LKHGYIPPTLH  375 (1061)
T ss_pred             CCc-ccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHh-hhcCccCCcCC
Confidence            998 999 99899866444     444555555332 2222111234578998887766665433321 11133221   


Q ss_pred             --------------------------CCCCceEEEEEEcccccceeeEEeee
Q 044410          370 --------------------------GEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       370 --------------------------G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                                                ...+.+.-+-+||.|.|-.-++++..
T Consensus       376 ~~~~np~i~~~~sp~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~  427 (1061)
T COG3321         376 FDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEA  427 (1061)
T ss_pred             CCCCCcCCccccCCeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeec
Confidence                                      10125677888998888888888753

>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]

Probab=98.43  E-value=1.9e-06  Score=80.15  Aligned_cols=94  Identities=11%  Similarity=0.046  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHH-cCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRL-LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~-LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      +-+|...+.+..+++.+++|+.|.-|+++++..-......++++.. -|++..+. ...++-.|+++++|+...+.-|++
T Consensus        61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvp-v~tvNRqCsSGLqaVadiA~~Ir~  139 (435)
T KOG1389|consen   61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADIAAKIRA  139 (435)
T ss_pred             hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccc-hhhhhhhhhhHHHHHHHHHHHHhc
Confidence            5678889999999999999999999999998652222555666554 48887653 777899999999999999999999


Q ss_pred             CCCCeEEEEEeccCcc
Q 044410          188 NPGARVLVVCSDIRVL  203 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~  203 (402)
                      |.++..|-.+.|.++.
T Consensus       140 G~ydIGla~GvESMt~  155 (435)
T KOG1389|consen  140 GFYDIGLAAGVESMTT  155 (435)
T ss_pred             Cceeeecccchhhhcc
Confidence            9999999999998874

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=98.13  E-value=9.8e-06  Score=80.83  Aligned_cols=94  Identities=15%  Similarity=0.127  Sum_probs=77.6

Q ss_pred             HHHHHHHHHHHHHHHc--CCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEW--GQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~a--g~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      ..+|.....+..+++.  ++++.+||.++.++..+  ......+..++..+|++.... .+.++.+|++++.|+..|.+.
T Consensus        27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p-~~~V~~~c~SG~~Av~~A~~~  105 (392)
T COG0183          27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVP-AVTVNRACASGLAAVRLAAQA  105 (392)
T ss_pred             HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCC-ceEEeccchhHHHHHHHHHHH
Confidence            4555555555565433  57777899999987776  356788899999999996332 889999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |++|..+.||+++.|++|.
T Consensus       106 I~sG~~dvvlagG~E~mS~  124 (392)
T COG0183         106 IASGEADVVLAGGVEKMSD  124 (392)
T ss_pred             HHCCCCCEEEEEeeeeccC
Confidence            9999999999999999985

>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]

Probab=97.91  E-value=1.5e-05  Score=72.77  Aligned_cols=91  Identities=22%  Similarity=0.307  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENN  188 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g  188 (402)
                      -.||+.+|..+||+++++.-++|+--+++-..+.  .....+-.-++|+..-+  .+.++++|+++-.||-+|+++|++|
T Consensus        29 ypd~a~ea~tkal~da~ikys~vqqa~vgyvfgd--stcgqraiyevgmtgip--i~nvnnncatgssalflakqiiesg  104 (408)
T KOG1406|consen   29 YPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGD--STCGQRAIYEVGMTGIP--IYNVNNNCATGSSALFLAKQIIESG  104 (408)
T ss_pred             CchHHHHHHHHHHHhcCCCHHHHHhhhheeeecC--CccchHHHHhccccCcc--eeeccCccccCchHHHHHHHHHhcC
Confidence            5689999999999999999999885544433221  11223444578998876  8999999999999999999999999


Q ss_pred             CCCeEEEEEeccCcc
Q 044410          189 PGARVLVVCSDIRVL  203 (402)
Q Consensus       189 ~~~~vLvv~~e~~s~  203 (402)
                      ..+.||..+.|++++
T Consensus       105 n~dcvlalgfekm~~  119 (408)
T KOG1406|consen  105 NSDCVLALGFEKMER  119 (408)
T ss_pred             CcceEEeechhhhCC
Confidence            999999999999863

>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=97.54  E-value=0.00014  Score=66.33  Aligned_cols=95  Identities=16%  Similarity=0.056  Sum_probs=77.9

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ++.+|..-|++.||+.+++.++.+|.||++....  ...-.++..+.-+.|.+.... +..++.=|.++++++-.+.+-|
T Consensus        27 ~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~p-ALtiNRLCGSGFQsiVNgaQ~I  105 (396)
T KOG1391|consen   27 SATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETP-ALTINRLCGSGFQSIVNGAQEI  105 (396)
T ss_pred             chhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccC-ceeehhhhcccHHHHHhhHHHh
Confidence            4789999999999999999999999999886532  111223455555667776653 8889999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      .-|..+.||.-+.|.+|.
T Consensus       106 ~vgea~ivL~GGtEnMSq  123 (396)
T KOG1391|consen  106 CVGEAEIVLCGGTENMSQ  123 (396)
T ss_pred             hcCcceEEEecCcccccc
Confidence            999999999999999973

>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]

Probab=97.05  E-value=0.00048  Score=63.79  Aligned_cols=93  Identities=11%  Similarity=0.130  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      +.+|+.+|...+|++..++.+.||.||+++... .-...++..-+-.-|++...+ +..+.++|-+.-.|+-....+|.+
T Consensus        66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktp-ahtvtmacissn~amttgmgliat  144 (465)
T KOG1392|consen   66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTP-AHTVTMACISSNVAMTTGMGLIAT  144 (465)
T ss_pred             hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCc-cceeeeehhccchhhhccceeEee
Confidence            678999999999999999999999999999876 455667777777778887653 889999999999999999999999


Q ss_pred             CCCCeEEEEEeccCc
Q 044410          188 NPGARVLVVCSDIRV  202 (402)
Q Consensus       188 g~~~~vLvv~~e~~s  202 (402)
                      |.++.++..+.|.+|
T Consensus       145 g~~dvivaggvelms  159 (465)
T KOG1392|consen  145 GNADVIVAGGVELMS  159 (465)
T ss_pred             CCcCEEEEcceeecc
Confidence            999998888888887

>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=96.99  E-value=0.0044  Score=58.71  Aligned_cols=53  Identities=23%  Similarity=0.304  Sum_probs=38.8

Q ss_pred             HHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          339 LREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       339 l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      -++.||+.+||++++|..++....  ...-.|   ++|+|+|+|+|......-+++.+
T Consensus       151 ~~~vGN~YTaSly~~L~SlL~~~~--~~~l~G---krI~~FSYGSG~~s~~fs~~v~~  203 (282)
T PF08540_consen  151 SRQVGNMYTASLYLGLASLLSSAE--ADDLAG---KRIGMFSYGSGLASEFFSGRVQP  203 (282)
T ss_dssp             HHHHB--GGGHHHHHHHHHHHHHH--SCHHTT----EEEEEEEETTTEEEEEEEEE-T
T ss_pred             HHHcCceehHHHHHHHHHHhhccC--ccccCC---CEEEEEEecCCcceeEEEEEEeC
Confidence            468899999999999999994211  233467   99999999999998877777654

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=96.35  E-value=0.036  Score=50.61  Aligned_cols=115  Identities=17%  Similarity=0.058  Sum_probs=78.7

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCC----------------CCC---------CHHHHHHHHcCCCCccc
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV----------------DMP---------GADVRLMRLLGLKPSVN  162 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~----------------~~p---------~~a~~i~~~LGl~~~~~  162 (402)
                      ....|+..++.+++++.    +++|.+||+|..+.                .-|         ..+.++.-..|....  
T Consensus        33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~--  106 (218)
T PF13723_consen   33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGP--  106 (218)
T ss_pred             HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCc--
Confidence            47889999999988653    57789999987430                112         234555555565543  


Q ss_pred             cceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC
Q 044410          163 RLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD  236 (402)
Q Consensus       163 ~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~  236 (402)
                       ...+..+=.++..||.-|..++..| .+.||||+.|......+.....      ......--|.|++|++++.
T Consensus       107 -~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~------~~~~~~~~A~al~L~~~~~  172 (218)
T PF13723_consen  107 -NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRP------ERDPPFPYALALVLSPGDS  172 (218)
T ss_pred             -eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhccc------ccCCCcCEEEEEEecCCCC
Confidence             4567888899999999999999999 8999999999976533221100      0112234577788887655

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=95.97  E-value=0.031  Score=46.25  Aligned_cols=97  Identities=15%  Similarity=0.115  Sum_probs=65.2

Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK  366 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~  366 (402)
                      ..+++++|+++|++. +|+ .|=.|-.-....-...+.||++++++..+= -.--+||...||=...+.+++.+..    
T Consensus        25 ~~A~~~al~~ag~~~-~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~G-G~la~GHP~gasG~r~~~~l~~~L~----   98 (123)
T PF02803_consen   25 VPAARKALERAGLTP-DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNG-GALALGHPLGASGARLVVELAHQLR----   98 (123)
T ss_dssp             HHHHHHHHHHHT--G-GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHhCCCc-cccchhhccchhhhHHHHhhccccccccccCccc-ccccccccccccccchhhhhHHHHH----
Confidence            357788999999997 999 999999887777788899999999887641 2335899998888777777776521    


Q ss_pred             ccCCCCCceEEEEEEcccccceeeEEe
Q 044410          367 ATTGEGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       367 i~~G~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                      -+.|   ++.+...-+.|..-.+++++
T Consensus        99 ~~~~---~~gla~~~~ggG~g~a~lle  122 (123)
T PF02803_consen   99 RRGG---RYGLAAICAGGGQGSAVLLE  122 (123)
T ss_dssp             HHTT---SEEEEEEEETTTEEEEEEEE
T ss_pred             Hhch---hhhhHHhcccceeeEEEEEE
Confidence            1234   66565555555555566765

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=95.87  E-value=0.034  Score=60.82  Aligned_cols=258  Identities=17%  Similarity=0.212  Sum_probs=149.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC---C---CCCC----------HHHHHHHHc----CCCCccccc
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG---V---DMPG----------ADVRLMRLL----GLKPSVNRL  164 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~---~---~~p~----------~a~~i~~~L----Gl~~~~~~~  164 (402)
                      -..|..++..+|+-++|++|.++.    .+..+.+.+   .   ..|.          .-.+.++++    .+.+.   .
T Consensus        87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGP---S  163 (2376)
T KOG1202|consen   87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGP---S  163 (2376)
T ss_pred             HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCC---c
Confidence            567999999999999999998875    344433322   1   1121          112333433    44543   6


Q ss_pred             eeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCc-----cccC-----CCCcc--chhhhhhhhhhccCcEEEEEc
Q 044410          165 MIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV-----LDFH-----EPSET--HLDVLVVQAVFGDGAGAAIIG  232 (402)
Q Consensus       165 ~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s-----~~~~-----~~~~~--~~~~~~~~~lfGDGAaA~vL~  232 (402)
                      +.+..+|++.+.||+.|.+-+++|.++.+||-+....-     ..|.     .|+-.  ..+.....+.-+||.+|++|.
T Consensus       164 ~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllq  243 (2376)
T KOG1202|consen  164 FSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQ  243 (2376)
T ss_pred             hhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEe
Confidence            77899999999999999999999999999988876532     1111     11100  011122345667999999998


Q ss_pred             cCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEc
Q 044410          233 ADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVH  311 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H  311 (402)
                      +.......   ...++...+    ++++     .++.|.  ++    +  ..+.-..++++..+++|+.| +++ |+=.|
T Consensus       244 rk~~ArRv---YAtilnart----NTDG-----fKEqGv--Tf----P--~G~~Q~qLi~e~Yse~Gl~P-~sv~YvEAH  302 (2376)
T KOG1202|consen  244 RKSLARRV---YATILNART----NTDG-----FKEQGV--TF----P--SGDMQEQLIRETYSEAGLNP-ESVVYVEAH  302 (2376)
T ss_pred             hhHHHHHH---HHHhhcccc----CCCc-----hhhcCc--cC----C--CcHHHHHHHHHHHHhcCCCc-ccEEEEEec
Confidence            76541110   112222111    1111     011221  11    1  12223467889999999998 998 88889


Q ss_pred             CCCHHH-----HHHHHHHcCCCccc--cHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc----------------
Q 044410          312 PGGDGL-----LDQVEKTLGLRKEK--LWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT----------------  368 (402)
Q Consensus       312 ~~~~~~-----~~~~~~~lgi~~ek--~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~----------------  368 (402)
                      ..+.++     ...+.+.+=-++..  ..-+  +-.+.||.-.||-.-+|+..+-. .++|.+.                
T Consensus       303 GtGTkVGDpQEaN~it~~fC~~Rt~pLLIGS--vKSNMGHaEPASGv~alaKills-mE~glip~NLHy~tPNp~ip~L~  379 (2376)
T KOG1202|consen  303 GTGTKVGDPQEANGITRFFCATRTTPLLIGS--VKSNMGHAEPASGVCALAKILLS-MEEGLIPPNLHYNTPNPEIPALV  379 (2376)
T ss_pred             cCCCCCCChHHhhhHHHHHhhcCCCceEeee--ccccCCCCCccchHHHHHHHHHH-HHhCcCCCccccCCCCCCcchhc
Confidence            765443     22233332111111  1111  23467887777777666654432 1113332                


Q ss_pred             -------------CCCCCceEEEEEEcccccceeeEEeeec
Q 044410          369 -------------TGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       369 -------------~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                                   +|   ..|-+-+||-|.+-.-++|+-..
T Consensus       380 dGrLkVVd~~lp~~G---GivGiNSFGFGGsN~HviLks~~  417 (2376)
T KOG1202|consen  380 DGRLKVVDRPLPWRG---GIVGINSFGFGGSNAHVILKSNT  417 (2376)
T ss_pred             cceeEEecCCCCccC---ceeeeeccccCCCceeEEeccCC
Confidence                         24   57888899998888888887543

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=95.09  E-value=0.036  Score=42.96  Aligned_cols=74  Identities=20%  Similarity=0.128  Sum_probs=44.2

Q ss_pred             HHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHHHHcCCCCeEEEE
Q 044410          121 IKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDIAENNPGARVLVV  196 (402)
Q Consensus       121 L~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~i~~g~~~~vLvv  196 (402)
                      |+++|++++|||.++....+    ......+.+.+|++.... ...    -+.+|++-+.+|..+..-=+-.+.+++|++
T Consensus         1 L~~~g~~~~did~~i~hq~~----~~~~~~~~~~lgi~~~~~-~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~   75 (90)
T PF08541_consen    1 LERAGLSPDDIDHFIPHQAS----KKILDSIAKRLGIPPERF-PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV   75 (90)
T ss_dssp             HHHTT--GGGESEEEE-SSS----HHHHHHHHHHHTS-GGGB-E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred             CccccCCHHHCCEEEeCCCC----HHHHHHHHHHcCCcHHHH-HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence            68999999999999986532    234456889999986532 111    245666666666554442222357899988


Q ss_pred             Eec
Q 044410          197 CSD  199 (402)
Q Consensus       197 ~~e  199 (402)
                      +.-
T Consensus        76 ~~G   78 (90)
T PF08541_consen   76 GFG   78 (90)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            753

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=94.86  E-value=0.1  Score=52.85  Aligned_cols=70  Identities=13%  Similarity=0.055  Sum_probs=41.4

Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHHH-HHHHH--HHcC--------------CCccccHHHHHHHHhcCCCCcch
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGL-LDQVE--KTLG--------------LRKEKLWASRYVLREYGNMGAPS  349 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-~~~~~--~~lg--------------i~~ek~~~~~~~l~~~Gn~~sas  349 (402)
                      ..+++++|+++|+++ +|| .+-+|-.-... +-.+.  +.||              ++.+++..+ -=.--+||...|+
T Consensus       310 ~~a~~~al~~aGl~~-~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~-GG~la~GHP~GAt  387 (426)
T PRK08170        310 VHAATPLLQRHGLTL-EDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVD-GGAIALGHPVGAS  387 (426)
T ss_pred             HHHHHHHHHHcCCCH-HHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCC-CCHHHhCCCccCc
Confidence            468889999999997 999 88888664332 21111  2222              333344332 1123479998877


Q ss_pred             HHHHHHHHHH
Q 044410          350 VFFILDEVRK  359 (402)
Q Consensus       350 i~i~L~~~~~  359 (402)
                      =...+.++.+
T Consensus       388 G~~~~~~l~~  397 (426)
T PRK08170        388 GARIVLHLLH  397 (426)
T ss_pred             cHHHHHHHHH
Confidence            7544444444

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=93.63  E-value=0.34  Score=48.23  Aligned_cols=91  Identities=9%  Similarity=0.031  Sum_probs=58.5

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHc-----CCCCcccc-ce-e-eccccchHHHHH
Q 044410          107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLL-----GLKPSVNR-LM-I-YTQGCYMGGTVI  178 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~L-----Gl~~~~~~-~~-~-i~~~C~~~~~al  178 (402)
                      +...+...++++++|+++|+.++|||.++....+    +..-..+.++|     |++.+... .+ . -+.+|++...+|
T Consensus       268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n----~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L  343 (378)
T PRK06816        268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSS----EYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML  343 (378)
T ss_pred             HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCccc----HHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence            4455677889999999999999999998864432    22335666766     88754210 11 1 355777777787


Q ss_pred             HHHHHHHHcCCCCeEEEEEeccC
Q 044410          179 RLAKDIAENNPGARVLVVCSDIR  201 (402)
Q Consensus       179 ~~A~~~i~~g~~~~vLvv~~e~~  201 (402)
                      ..+..-=+-.+.++|++++.+..
T Consensus       344 ~~a~~~g~~~~Gd~vl~~~~~s~  366 (378)
T PRK06816        344 DELLNSGRLKPGQKILCFVPESG  366 (378)
T ss_pred             HHHHHcCCCCCCCEEEEEEeccc
Confidence            65532111124688888876654

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=93.21  E-value=0.6  Score=47.43  Aligned_cols=71  Identities=17%  Similarity=0.083  Sum_probs=52.2

Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc------------------ccHHHHHHHHhcCCCCcc
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE------------------KLWASRYVLREYGNMGAP  348 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e------------------k~~~~~~~l~~~Gn~~sa  348 (402)
                      ...++++++++|+++ +|| .+=+|-.-....-...+.||+.+.                  ++..+ -=+-.+||...|
T Consensus       312 ~~A~~~a~~~AGl~~-~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GHP~gA  389 (438)
T PTZ00455        312 RAAAQKALSMAGVKP-SDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG-GGLLSFGHPVGA  389 (438)
T ss_pred             HHHHHHHHHHcCCCH-HHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCC-CchhhcCCCcch
Confidence            467889999999997 999 888888766666677889998762                  23221 112357999988


Q ss_pred             hHHHHHHHHHHh
Q 044410          349 SVFFILDEVRKK  360 (402)
Q Consensus       349 si~i~L~~~~~~  360 (402)
                      +-...+.++..+
T Consensus       390 tG~~~v~e~~~Q  401 (438)
T PTZ00455        390 TGVKQIMEVYRQ  401 (438)
T ss_pred             HHHHHHHHHHHH
Confidence            887777777664

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=93.09  E-value=0.29  Score=47.69  Aligned_cols=85  Identities=19%  Similarity=0.238  Sum_probs=56.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-ce--eeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LM--IYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~--~i~~~C~~~~~al~~A~~~  184 (402)
                      .......++.+++|+++|++++|||.+++....    +..-..+.+.||++..... .+  --+.++++.+.+|..+   
T Consensus       236 ~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~----~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~---  308 (338)
T PRK09258        236 EGVELAVDTWEAFLAQLGWAVEQVDRVICHQVG----AAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA---  308 (338)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCC----HHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH---
Confidence            455677788999999999999999988875432    2344688899999864311 11  1244556666666544   


Q ss_pred             HHcC---CCCeEEEEEec
Q 044410          185 AENN---PGARVLVVCSD  199 (402)
Q Consensus       185 i~~g---~~~~vLvv~~e  199 (402)
                      ++.|   +.+++|+++..
T Consensus       309 ~~~g~~~~Gd~vll~~~G  326 (338)
T PRK09258        309 AEEGFLKPGDRVALLGIG  326 (338)
T ss_pred             HHhCCCCCCCEEEEEEec
Confidence            3333   46888887744

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=92.62  E-value=0.31  Score=47.03  Aligned_cols=82  Identities=12%  Similarity=0.022  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY----TQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i----~~~C~~~~~al~~A~~~  184 (402)
                      ..+-..++.+++|+++|++++|||.+++...    .+..-..+++.||++.+.. ...+    +.+|++.+.+|..+   
T Consensus       217 ~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~-~~~~~~~Gn~~sas~~~~L~~~---  288 (318)
T TIGR00747       217 AVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQV-VKTVHKYGNTSAASIPLALDEL---  288 (318)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHe-eehHhhhCCHHHHHHHHHHHHH---
Confidence            3455677899999999999999999986432    2334567899999986431 1122    34555555555443   


Q ss_pred             HHcC---CCCeEEEEEe
Q 044410          185 AENN---PGARVLVVCS  198 (402)
Q Consensus       185 i~~g---~~~~vLvv~~  198 (402)
                      +++|   +.+++|+++.
T Consensus       289 ~~~~~~~~Gd~vll~~~  305 (318)
T TIGR00747       289 LRTGRIKPGDLLLLVAF  305 (318)
T ss_pred             HHcCCCCCCCEEEEEEE
Confidence            3343   4578887774

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=92.59  E-value=0.41  Score=47.00  Aligned_cols=82  Identities=22%  Similarity=0.174  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-----eeeccccchHHHHHHHHHHH
Q 044410          110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-----MIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-----~~i~~~C~~~~~al~~A~~~  184 (402)
                      ...+..+++++|+++|++++|||.+++...+.    .+-..+.+.||++......     -.-+.++++...+|..+...
T Consensus       207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~----~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~  282 (345)
T TIGR00748       207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG----KFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI  282 (345)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh----HHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh
Confidence            44556889999999999999999998754322    2445688999997642111     11355778888888766553


Q ss_pred             HHcCCCCeEEEEE
Q 044410          185 AENNPGARVLVVC  197 (402)
Q Consensus       185 i~~g~~~~vLvv~  197 (402)
                      ++  +.++||+++
T Consensus       283 ~~--~Gd~vll~~  293 (345)
T TIGR00748       283 AE--PGDRILAVS  293 (345)
T ss_pred             cC--CCCEEEEEE
Confidence            33  456777666

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=92.13  E-value=0.63  Score=45.18  Aligned_cols=83  Identities=12%  Similarity=0.020  Sum_probs=53.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~  184 (402)
                      .......++.+++|+++|++++|||.+++...+.    ..-..+++.||++..... .+.  -+.+|++.+.+|..   +
T Consensus       227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~----~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~---~  299 (329)
T PRK07204        227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASG----PAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE---A  299 (329)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---H
Confidence            4556677899999999999999999988744322    234688999999864311 011  13344445555543   4


Q ss_pred             HHcC---CCCeEEEEE
Q 044410          185 AENN---PGARVLVVC  197 (402)
Q Consensus       185 i~~g---~~~~vLvv~  197 (402)
                      ++.|   +.+++|+++
T Consensus       300 ~~~g~~~~Gd~vll~~  315 (329)
T PRK07204        300 IKQKKVQRGNKILLLG  315 (329)
T ss_pred             HHcCCCCCCCEEEEEE
Confidence            4444   467888776

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=92.11  E-value=0.4  Score=46.46  Aligned_cols=83  Identities=10%  Similarity=0.061  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~i  185 (402)
                      ..+...++.+++|+++|++++|||.+++...    .+..-..+.++||++..... .+.  -+.++++...+|..+   +
T Consensus       225 ~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~---~  297 (326)
T PRK05963        225 AVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA---N  297 (326)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH---H
Confidence            4556678899999999999999999887332    23345678899999865310 001  133445555555433   3


Q ss_pred             HcC---CCCeEEEEEe
Q 044410          186 ENN---PGARVLVVCS  198 (402)
Q Consensus       186 ~~g---~~~~vLvv~~  198 (402)
                      +.+   +.+++|+++.
T Consensus       298 ~~~~~~~Gd~vll~~~  313 (326)
T PRK05963        298 LEQPLREGERLLFAAA  313 (326)
T ss_pred             HhCCCCCCCEEEEEEE
Confidence            333   4678888874

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=91.99  E-value=0.97  Score=45.76  Aligned_cols=97  Identities=13%  Similarity=0.037  Sum_probs=54.9

Q ss_pred             HHHHHhhccCCCCCCcce-EEEEcCCCHHH-HHHH--HHHcCCC------------ccccHHHH-HHHHhcCCCCcchHH
Q 044410          289 KCLSNAMSPIGISDWNSL-FYVVHPGGDGL-LDQV--EKTLGLR------------KEKLWASR-YVLREYGNMGAPSVF  351 (402)
Q Consensus       289 ~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-~~~~--~~~lgi~------------~ek~~~~~-~~l~~~Gn~~sasi~  351 (402)
                      ..++++++++|+++ +|| .+=+|-.-... +-.+  .+.||+-            .++.+.|. --.-.+||...|+-.
T Consensus       313 ~a~~~a~~~AGl~~-~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~  391 (427)
T PRK09268        313 YAVPRLLARNGLTL-QDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGG  391 (427)
T ss_pred             HHHHHHHHHcCCCH-HHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchH
Confidence            47788999999997 999 88777654333 1121  2434432            11223220 011237899888877


Q ss_pred             HHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEe
Q 044410          352 FILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       352 i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                      ..+.++..+..  +  +.|   .+.+...-+.|..-.+++++
T Consensus       392 ~~v~e~~~QL~--~--~~~---~~gl~~~c~~gG~g~a~~~e  426 (427)
T PRK09268        392 RIVATLAKLLA--E--KGS---GRGLISICAAGGQGVTAILE  426 (427)
T ss_pred             HHHHHHHHHHH--h--cCC---CEEEEEEcccCchheEEEEe
Confidence            77777776521  1  223   56555444444444556665

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=91.01  E-value=0.96  Score=43.72  Aligned_cols=82  Identities=13%  Similarity=0.040  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-ee--eccccchHHHHHHHHHHHHH
Q 044410          110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-MI--YTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-~~--i~~~C~~~~~al~~A~~~i~  186 (402)
                      .+...++.+++|+++|++++|||.+++....    +.....++++||++...... +.  -+.+|++.+.+|.   .+++
T Consensus       224 ~~~~~~~i~~~L~~~g~~~~did~~~~h~~~----~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~  296 (325)
T PRK12879        224 VRTMPKGARQVLEKAGLTKDDIDWVIPHQAN----LRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LALE  296 (325)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHHH
Confidence            4455678899999999999999999875432    33446789999997543111 11  2334555666664   3345


Q ss_pred             cC---CCCeEEEEEe
Q 044410          187 NN---PGARVLVVCS  198 (402)
Q Consensus       187 ~g---~~~~vLvv~~  198 (402)
                      .|   +.+++|+++.
T Consensus       297 ~g~~~~Gd~vll~~~  311 (325)
T PRK12879        297 QGKIKPGDTLLLYGF  311 (325)
T ss_pred             cCCCCCCCEEEEEEE
Confidence            54   4578887774

>PRK06840 hypothetical protein; Validated

Probab=90.42  E-value=0.95  Score=44.13  Aligned_cols=82  Identities=18%  Similarity=0.114  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee--eccccchHHHHHHHHHHHHHc
Q 044410          110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI--YTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~--i~~~C~~~~~al~~A~~~i~~  187 (402)
                      .....++.+++|+++|++++|||.++.....    +..-..++++||++........  -+.++++.+.+|..   ++++
T Consensus       236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~~~----~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~---~~~~  308 (339)
T PRK06840        236 IPNFLKVIREALRKSGYTPKDIDYLAILHMK----RSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHL---ALEQ  308 (339)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEECCcC----HHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHH---HHHc
Confidence            3455789999999999999999998764432    2333568999999864311111  23345555555543   3444


Q ss_pred             C---CCCeEEEEEe
Q 044410          188 N---PGARVLVVCS  198 (402)
Q Consensus       188 g---~~~~vLvv~~  198 (402)
                      +   +.+++|+++.
T Consensus       309 ~~~~~Gd~ill~~~  322 (339)
T PRK06840        309 GKLKDGDLVVLVSA  322 (339)
T ss_pred             CCCCCCCEEEEEEE
Confidence            3   4678887774

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=90.38  E-value=0.23  Score=40.67  Aligned_cols=74  Identities=19%  Similarity=0.269  Sum_probs=46.3

Q ss_pred             HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCc--cccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410          285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRK--EKLWASRYVLREYGNMGAPSVFFILDE  356 (402)
Q Consensus       285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~--ek~~~~~~~l~~~Gn~~sasi~i~L~~  356 (402)
                      ..+.++|+++|+++|+++ ++| ++..|-.+....+.     +.+.++-..  ..++.+ .+-..+||+.+++-++.|..
T Consensus        25 ~~~~~~i~~al~~agi~~-~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~Gh~~~asG~~~l~~  102 (119)
T PF02801_consen   25 AALARAIRRALADAGISP-EDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVG-SVKSNIGHTEAASGLLSLAK  102 (119)
T ss_dssp             HHHHHHHHHHHHHHTS-G-GGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE--THHHH-B-GGGHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcccc-ccceeeeeeccccccchhhhhhhhhhhhccccccccccee-ccccccccccccchHHHHHH
Confidence            456678999999999997 999 99999888776554     344455332  123332 13568999999999999887


Q ss_pred             HHHh
Q 044410          357 VRKK  360 (402)
Q Consensus       357 ~~~~  360 (402)
                      .+-.
T Consensus       103 ~~l~  106 (119)
T PF02801_consen  103 ALLA  106 (119)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6653

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=90.11  E-value=1.1  Score=43.34  Aligned_cols=80  Identities=11%  Similarity=0.057  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHHHH
Q 044410          111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~i~  186 (402)
                      ....++++++|+++|++++|||.+++....    ......+++.||++.... ...    -+.+|++.+.+|..+   ++
T Consensus       226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~-~~~l~~~Gn~~sasi~~~L~~~---~~  297 (326)
T CHL00203        226 FQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKM-ITNLEKYGNTSAASIPLALDEA---IQ  297 (326)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhHHHhhCcHHHHHHHHHHHHH---HH
Confidence            446677899999999999999998875432    234467899999985432 111    234555666666544   34


Q ss_pred             cC---CCCeEEEEEe
Q 044410          187 NN---PGARVLVVCS  198 (402)
Q Consensus       187 ~g---~~~~vLvv~~  198 (402)
                      .|   +.+++|+++.
T Consensus       298 ~g~~~~Gd~vll~~~  312 (326)
T CHL00203        298 NNKIQPGQIIVLSGF  312 (326)
T ss_pred             hCCCCCCCEEEEEEE
Confidence            43   4678887773

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=89.95  E-value=1.1  Score=42.99  Aligned_cols=82  Identities=16%  Similarity=0.083  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY----TQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i----~~~C~~~~~al~~A~~~  184 (402)
                      ..+...++.+++|+++|+.++|||.+++....    +..-..+.+.||++.... ...+    +.++++.+.+|..+   
T Consensus       221 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~----~~~~~~~~~~lgl~~~~~-~~~~~~~Gn~~sas~~~~L~~~---  292 (320)
T cd00830         221 AVRLMPESIEEALEKAGLTPDDIDWFVPHQAN----LRIIEAVAKRLGLPEEKV-VVNLDRYGNTSAASIPLALDEA---  292 (320)
T ss_pred             HHHhhHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhhHHhhCcHHHHHHHHHHHHH---
Confidence            45667789999999999999999998875432    234466889999975431 1111    33444555555433   


Q ss_pred             HHcC---CCCeEEEEEe
Q 044410          185 AENN---PGARVLVVCS  198 (402)
Q Consensus       185 i~~g---~~~~vLvv~~  198 (402)
                      ++.+   +.+++|+++.
T Consensus       293 ~~~~~~~~G~~vll~~~  309 (320)
T cd00830         293 IEEGKLKKGDLVLLLGF  309 (320)
T ss_pred             HHcCCCCCCCEEEEEEE
Confidence            4444   4688888774

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=89.61  E-value=0.79  Score=45.06  Aligned_cols=89  Identities=21%  Similarity=0.150  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEEE-ecCCCCCCCHHHHHHHHcCCCC--cc---ccceeeccccchHHHHHHHHHHHH
Q 044410          112 LGKEAALKAIKEWGQPVSKITHLIFS-AFYGVDMPGADVRLMRLLGLKP--SV---NRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       112 la~~Aa~~aL~~ag~~~~dId~li~~-s~~~~~~p~~a~~i~~~LGl~~--~~---~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      =..++.+++|+++|++++|||.|+.. +.+++.....+.-+..-+|-..  .+   .....-+.+.+++...+..+...+
T Consensus       235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~  314 (348)
T PRK06147        235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS  314 (348)
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence            34688999999999999999987643 2222221222233334444211  10   002223445555656666666667


Q ss_pred             HcC--CCCeEEEEEecc
Q 044410          186 ENN--PGARVLVVCSDI  200 (402)
Q Consensus       186 ~~g--~~~~vLvv~~e~  200 (402)
                      +.|  +..++||.+++-
T Consensus       315 ~~g~~~g~~~L~~s~~d  331 (348)
T PRK06147        315 RKGYGPGPNVLCHLSDD  331 (348)
T ss_pred             HcCcCCCCcEEEEecCC
Confidence            776  467899887543

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=89.48  E-value=1.2  Score=44.18  Aligned_cols=86  Identities=10%  Similarity=0.050  Sum_probs=54.5

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHH-cCCCCcccc---ce--eeccccchHHHHHHH
Q 044410          107 DEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRL-LGLKPSVNR---LM--IYTQGCYMGGTVIRL  180 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~-LGl~~~~~~---~~--~i~~~C~~~~~al~~  180 (402)
                      +...+...++.+++|+++|++++|||.+++......    +-..+.++ ||+.....+   .+  --+.+|++.+.+|..
T Consensus       267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~----~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~  342 (372)
T PRK07515        267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANIN----MNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK  342 (372)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH----HHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence            345666778999999999999999999887443221    22234555 565321111   11  135677888888877


Q ss_pred             HHHHHHcCCCCeEEEEEe
Q 044410          181 AKDIAENNPGARVLVVCS  198 (402)
Q Consensus       181 A~~~i~~g~~~~vLvv~~  198 (402)
                      +...+  .+.+++|+++.
T Consensus       343 ~~~~~--~~Gd~vll~~~  358 (372)
T PRK07515        343 HSDDL--AAGDLGVICSF  358 (372)
T ss_pred             HhccC--CCCCEEEEEEe
Confidence            65433  34678887764

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=89.31  E-value=1.6  Score=42.06  Aligned_cols=77  Identities=17%  Similarity=-0.087  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCH-HHHHHHHcCCCC----ccccceeeccccchHHHHHHHHHHHH
Q 044410          111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGA-DVRLMRLLGLKP----SVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~-a~~i~~~LGl~~----~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +...++++++|+++|+.++|||.++............ ........+..+    ... ...-+.++++++..|..+...+
T Consensus       205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~G~~~aas~~~~l~~~~~~~  283 (332)
T cd00825         205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATK-AMTGNLSSAAVVLAVDEAVLML  283 (332)
T ss_pred             HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCC-cccccchhHhHHHHHHHHHHHH
Confidence            4456789999999999999999888765443222222 222233333210    110 1224557777888887777766


Q ss_pred             HcC
Q 044410          186 ENN  188 (402)
Q Consensus       186 ~~g  188 (402)
                      +.+
T Consensus       284 ~~~  286 (332)
T cd00825         284 EHG  286 (332)
T ss_pred             hcC
Confidence            655

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=88.88  E-value=1.8  Score=42.98  Aligned_cols=83  Identities=11%  Similarity=0.032  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~i  185 (402)
                      ......++++++|+++|++++|||.++.....    ..+-..++++||++..... .+.  -+.++++.+.+|..+   +
T Consensus       278 ~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~---~  350 (379)
T PLN02326        278 AVRCVPQVIESALQKAGLTAESIDWLLLHQAN----QRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA---V  350 (379)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---H
Confidence            44556678999999999999999988874432    2233568999999864311 111  234555666666544   3


Q ss_pred             HcC---CCCeEEEEEe
Q 044410          186 ENN---PGARVLVVCS  198 (402)
Q Consensus       186 ~~g---~~~~vLvv~~  198 (402)
                      +.+   +.+++|+++.
T Consensus       351 ~~g~~~~Gd~vll~~~  366 (379)
T PLN02326        351 RSGKVKKGDVIATAGF  366 (379)
T ss_pred             HcCCCCCCCEEEEEEE
Confidence            443   4678887763

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=88.76  E-value=1.7  Score=41.80  Aligned_cols=82  Identities=13%  Similarity=0.011  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~  184 (402)
                      ......++.+++|+++|++++|||.++....    .+..-..+.+.||++.... ...    -+.+|++.+..|.   .+
T Consensus       217 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~~a~~~~~L~---~~  288 (319)
T PRK09352        217 AVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKV-VVTVDKYGNTSAASIPLALD---EA  288 (319)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHh-hhhHHhhCCHHHHHHHHHHH---HH
Confidence            3445677899999999999999999987442    2334467889999986532 111    1334455555553   34


Q ss_pred             HHcC---CCCeEEEEEe
Q 044410          185 AENN---PGARVLVVCS  198 (402)
Q Consensus       185 i~~g---~~~~vLvv~~  198 (402)
                      ++.|   +.+++|+++.
T Consensus       289 ~~~g~~~~Gd~vll~s~  305 (319)
T PRK09352        289 VRDGRIKRGDLVLLEGF  305 (319)
T ss_pred             HHcCCCCCCCEEEEEEE
Confidence            4443   4678887774

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=88.24  E-value=2.2  Score=39.39  Aligned_cols=87  Identities=15%  Similarity=-0.024  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHH-HHHHHHcCCC----CccccceeeccccchHHHHHHHHHHH
Q 044410          110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGAD-VRLMRLLGLK----PSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a-~~i~~~LGl~----~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      .....++++++|+++|+.++|||.++............. .......+..    .... ...-+..+++++..|..+...
T Consensus       144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~as~~~~l~~~~~~  222 (254)
T cd00327         144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATL-IMTGHPLGAAGLAILDELLLM  222 (254)
T ss_pred             hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccc-cccccchHHHHHHHHHHHHHH
Confidence            455678899999999999999998876544332111111 1111222221    1110 122455677777777777666


Q ss_pred             HHcC-------CCCeEEEEE
Q 044410          185 AENN-------PGARVLVVC  197 (402)
Q Consensus       185 i~~g-------~~~~vLvv~  197 (402)
                      ++.+       +.+++|+.+
T Consensus       223 ~~~~~~~~~~~~~~~~l~~~  242 (254)
T cd00327         223 LEHEFIPPTPREPRTVLLLG  242 (254)
T ss_pred             HhCCCcCCCCCCcCEEEEee
Confidence            6654       456666554

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=87.82  E-value=1.3  Score=44.57  Aligned_cols=73  Identities=15%  Similarity=0.079  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec---------cccchHHHHHHHHHHH
Q 044410          114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT---------QGCYMGGTVIRLAKDI  184 (402)
Q Consensus       114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~---------~~C~~~~~al~~A~~~  184 (402)
                      ..|++++|+++|++++|||.+.+...    .........+.||++...  . .++         .|++|....+.+..++
T Consensus       318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~~~--v-N~~GG~ia~GHp~GaTGa~~v~~ll~qL  390 (417)
T PRK06025        318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDRDK--V-NVNGGAIALGHPIGATGSILIGTVLDEL  390 (417)
T ss_pred             HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCChhh--c-cccCCHHhcCCchhHHHHHHHHHHHHHH
Confidence            47999999999999999998875432    223344667788886543  2 222         2566666667777777


Q ss_pred             HHcCCCCeEE
Q 044410          185 AENNPGARVL  194 (402)
Q Consensus       185 i~~g~~~~vL  194 (402)
                      .+.+ .++.|
T Consensus       391 ~~~g-~~~Gl  399 (417)
T PRK06025        391 ERRG-LKRGL  399 (417)
T ss_pred             HHhC-CCeEE
Confidence            6665 45553

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=87.78  E-value=2.4  Score=40.26  Aligned_cols=85  Identities=12%  Similarity=0.219  Sum_probs=58.9

Q ss_pred             HHHhHHHHHHHhhccCCCCCCcce-EEEEc----CCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410          283 IGNYVDKCLSNAMSPIGISDWNSL-FYVVH----PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV  357 (402)
Q Consensus       283 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~H----~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~  357 (402)
                      +...+..+++++|+++|+++ +|| .+|.+    .+...+-..+.+++|+..+-...      +.+=+|.+.-+++++.+
T Consensus        83 ae~v~f~av~~LL~ktgv~p-~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~------nLsGMGCsAgliai~lA  155 (290)
T PF08392_consen   83 AEMVIFGAVDDLLAKTGVKP-SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSY------NLSGMGCSAGLIAIDLA  155 (290)
T ss_pred             HHHHHHHHHHHHHHHcCCCH-HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeee------cccCCcchhhHHHHHHH
Confidence            34456688999999999998 998 66554    34567888999999998765433      35666666666666654


Q ss_pred             HHhhhhhhcccCCCCCceEEEEEE
Q 044410          358 RKKSIEEMKATTGEGLECGVLFGF  381 (402)
Q Consensus       358 ~~~~~~~g~i~~G~~~d~vll~~~  381 (402)
                      .+-    =+..|+   .++|+++.
T Consensus       156 ~~l----L~~~p~---~~ALVVst  172 (290)
T PF08392_consen  156 KDL----LQAHPN---SYALVVST  172 (290)
T ss_pred             HHH----HHhCCC---cEEEEEEE
Confidence            432    114566   78787774

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=86.45  E-value=1.8  Score=42.01  Aligned_cols=85  Identities=12%  Similarity=0.076  Sum_probs=55.5

Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee----ccccchHHHHHHH
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY----TQGCYMGGTVIRL  180 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i----~~~C~~~~~al~~  180 (402)
                      ..+.+..+..++.+++|++++++++|||.++...    .....-..++++||++.... ...+    +.+-++-..+|..
T Consensus       217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~-~~~~~~yGNtsaAsiplaL~~  291 (323)
T COG0332         217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKV-VVTVDKYGNTSAASIPLALDE  291 (323)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHH-hhHHHHhcccccchHHHHHHH
Confidence            3456888999999999999999999999887633    22334467889999976532 2222    2233444445544


Q ss_pred             HHHHHHcC---CCCeEEEEE
Q 044410          181 AKDIAENN---PGARVLVVC  197 (402)
Q Consensus       181 A~~~i~~g---~~~~vLvv~  197 (402)
                      +   ++.|   +.+.+|+++
T Consensus       292 ~---~~~g~ik~Gd~ill~~  308 (323)
T COG0332         292 A---LREGRIKPGDLVLLEA  308 (323)
T ss_pred             H---hhhCCCCCCCEEEEEe
Confidence            4   3334   346677655

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=86.08  E-value=1.9  Score=39.52  Aligned_cols=88  Identities=16%  Similarity=0.191  Sum_probs=54.2

Q ss_pred             HHHHHhHHHHHHHhhccCCCCCCcce-EEEEcC----CCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHH
Q 044410          281 VAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHP----GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILD  355 (402)
Q Consensus       281 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~----~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~  355 (402)
                      +.+.+...++++++|++.|+++ +|| ++|.-.    ....+--.+.++||++++--..      -.+.+|++.-...|.
T Consensus        98 ~~a~~L~~~Aa~~AL~~~g~~~-~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~------~i~~~GC~gg~~~L~  170 (226)
T PF00195_consen   98 EEAPPLAEEAARKALAEAGLDP-SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRT------PIFGMGCAGGAAGLR  170 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHTS-G-GGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEE------EEES-GGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCC-cccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEE------EEeccchhhHHHHHH
Confidence            3456666678889999999997 999 776532    2355666899999998753222      245666666666665


Q ss_pred             HHHHhhhhhhcccCCCCCceEEEEEEc
Q 044410          356 EVRKKSIEEMKATTGEGLECGVLFGFG  382 (402)
Q Consensus       356 ~~~~~~~~~g~i~~G~~~d~vll~~~G  382 (402)
                      .+.+-    -+-.||   .+||+++.=
T Consensus       171 ~A~~~----~~~~p~---a~VLvv~vE  190 (226)
T PF00195_consen  171 RAKDI----ARANPG---ARVLVVCVE  190 (226)
T ss_dssp             HHHHH----HHHSTT----EEEEEEEE
T ss_pred             HHHHH----HhCCcc---ceEEEEEEE
Confidence            54442    113467   899988764

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PRK04262 hypothetical protein; Provisional

Probab=85.87  E-value=2.2  Score=41.82  Aligned_cols=81  Identities=21%  Similarity=0.183  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-----eeeccccchHHHHHHHHHHHH
Q 044410          111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-----MIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-----~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ....++.+++|+++|++++|||.+++....    +.+-..++++||++......     -.-+.++++-+.+|..+..- 
T Consensus       209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~-  283 (347)
T PRK04262        209 KHIISAAKGLMEKLGLKPSDYDYAVFHQPN----GKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV-  283 (347)
T ss_pred             HHHHHHHHHHHHHhCcCHHHhceeecCCCc----hHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh-
Confidence            456778999999999999999998875322    23446788899998653210     11244666666666555432 


Q ss_pred             HcCCCCeEEEEE
Q 044410          186 ENNPGARVLVVC  197 (402)
Q Consensus       186 ~~g~~~~vLvv~  197 (402)
                       ..+.+++|+++
T Consensus       284 -~~~Gd~vll~~  294 (347)
T PRK04262        284 -AKPGDRILVVS  294 (347)
T ss_pred             -CCCCCEEEEEe
Confidence             23456666554

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=82.60  E-value=0.8  Score=37.43  Aligned_cols=77  Identities=14%  Similarity=0.027  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEEEec-CCCCCCCHHHHHHHHcCCCC---ccc----cceeeccccchHHHHHHHHHH
Q 044410          112 LGKEAALKAIKEWGQPVSKITHLIFSAF-YGVDMPGADVRLMRLLGLKP---SVN----RLMIYTQGCYMGGTVIRLAKD  183 (402)
Q Consensus       112 la~~Aa~~aL~~ag~~~~dId~li~~s~-~~~~~p~~a~~i~~~LGl~~---~~~----~~~~i~~~C~~~~~al~~A~~  183 (402)
                      -..++++++|+++|++++|||.|....+ ++..-+.-+.-+.+-++-..   .+.    ....-...+++++..|..+..
T Consensus        26 ~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l  105 (119)
T PF02801_consen   26 ALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL  105 (119)
T ss_dssp             HHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence            3467899999999999999998765332 22222222334444444321   010    122234566777777777777


Q ss_pred             HHHcC
Q 044410          184 IAENN  188 (402)
Q Consensus       184 ~i~~g  188 (402)
                      .++.+
T Consensus       106 ~l~~~  110 (119)
T PF02801_consen  106 ALEHG  110 (119)
T ss_dssp             HHHHT
T ss_pred             HHhcC
Confidence            77655

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=82.43  E-value=4.2  Score=40.00  Aligned_cols=87  Identities=16%  Similarity=0.015  Sum_probs=56.8

Q ss_pred             hHHHHHHHHHHHHHHHc--CCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-----c-eeeccccchHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEW--GQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-----L-MIYTQGCYMGGTVIR  179 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~a--g~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-----~-~~i~~~C~~~~~al~  179 (402)
                      .......++++++|+++  |++++|||.+++.....    ..-..++++||++.....     . -.-+.++++.+.+|.
T Consensus       256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~~----~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~  331 (361)
T cd00831         256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGR----AVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA  331 (361)
T ss_pred             HHHHHHHHHHHHHhccccCCCccccceEEEECCCCh----HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence            35566777899999999  99999999888754322    233568899999865310     1 113556677777776


Q ss_pred             HHHHHHHcCCCCeEEEEEe
Q 044410          180 LAKDIAENNPGARVLVVCS  198 (402)
Q Consensus       180 ~A~~~i~~g~~~~vLvv~~  198 (402)
                      .+..--+-.+.+++|+++.
T Consensus       332 ~~~~~g~~~~Gd~vll~~~  350 (361)
T cd00831         332 YMEAKGRVKRGDRGLLIAF  350 (361)
T ss_pred             HHHHhCCCCCCCEEEEEEE
Confidence            5543211124678888774

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=80.70  E-value=5.9  Score=32.71  Aligned_cols=74  Identities=22%  Similarity=0.266  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeecc---------ccchHHHHHHHHHHH
Q 044410          114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQ---------GCYMGGTVIRLAKDI  184 (402)
Q Consensus       114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~---------~C~~~~~al~~A~~~  184 (402)
                      ..|++++|+++|++++|||.+=+.-    .+....-...+.||++...   .+.+.         ||+|....++++.++
T Consensus        25 ~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~~~---vN~~GG~la~GHP~gasG~r~~~~l~~~L   97 (123)
T PF02803_consen   25 VPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDPEK---VNPNGGALALGHPLGASGARLVVELAHQL   97 (123)
T ss_dssp             HHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGGGG---BSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccccc---cCcccccccccccccccccchhhhhHHHH
Confidence            5799999999999999999875532    1223345567788987643   23322         556666666666666


Q ss_pred             HHcCCCCeEEE
Q 044410          185 AENNPGARVLV  195 (402)
Q Consensus       185 i~~g~~~~vLv  195 (402)
                      -..+ .++.++
T Consensus        98 ~~~~-~~~gla  107 (123)
T PF02803_consen   98 RRRG-GRYGLA  107 (123)
T ss_dssp             HHHT-TSEEEE
T ss_pred             HHhc-hhhhhH
Confidence            5544 455543

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=80.51  E-value=5.8  Score=41.01  Aligned_cols=81  Identities=25%  Similarity=0.231  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccc--------cchHHHHHHHHHHH
Q 044410          113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQG--------CYMGGTVIRLAKDI  184 (402)
Q Consensus       113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~--------C~~~~~al~~A~~~  184 (402)
                      ...|+++|++++|++++|||.+=+-+|.    |.......+.||+...-.+-..++.|        .+++++.+.-+...
T Consensus       294 ~~~aa~~a~~~AGi~~~Did~~elydcF----~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~Q  369 (498)
T PRK08257        294 IRAAGRRALALAGLGIDDIDAFDLYSCF----PSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVER  369 (498)
T ss_pred             HHHHHHHHHHHhCCCHHHCCEEEeccCC----HHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHH
Confidence            3569999999999999999998766653    33334556889986541001222222        23344555445555


Q ss_pred             HHcCCCCeEEEEE
Q 044410          185 AENNPGARVLVVC  197 (402)
Q Consensus       185 i~~g~~~~vLvv~  197 (402)
                      |+..+.++.|+.+
T Consensus       370 LRg~~~~~gLv~~  382 (498)
T PRK08257        370 LRANPGRRGLVTA  382 (498)
T ss_pred             HhhcCCCEEEEEC
Confidence            5544566666654

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=80.14  E-value=5.5  Score=39.39  Aligned_cols=78  Identities=14%  Similarity=-0.042  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccce------eeccccchHHHHHHHHHHHH
Q 044410          112 LGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLM------IYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       112 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~------~i~~~C~~~~~al~~A~~~i  185 (402)
                      -...|++++|+++|++++|||.+.....    .........+.||+...+....      -.-.|++|......+..++-
T Consensus       259 ~~~~a~~~al~~Agl~~~Did~~ei~ea----fa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~  334 (361)
T PRK06690        259 GPIFAVNKLLNEMNMKVEDIDYFEINEA----FASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAK  334 (361)
T ss_pred             HHHHHHHHHHHHcCCCHHHcCEeeecch----hHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHH
Confidence            4567999999999999999998866332    2233345667889865421011      12336666666666666665


Q ss_pred             HcCCCCeEE
Q 044410          186 ENNPGARVL  194 (402)
Q Consensus       186 ~~g~~~~vL  194 (402)
                      +.| .++.+
T Consensus       335 ~~~-~~~g~  342 (361)
T PRK06690        335 RED-MKYGI  342 (361)
T ss_pred             HhC-CCEEE
Confidence            543 44544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	402
3a5s_A	387	Benzalacetone Synthase (I207lL208F) Length = 387		1e-132
1cgz_A	389	Chalcone Synthase From Alfalfa Complexed With Resve		1e-131
3a5q_A	387	Benzalacetone Synthase From Rheum Palmatum Length =		1e-131
1cml_A	389	Chalcone Synthase From Alfalfa Complexed With Malon		1e-130
1chw_A	389	Chalcone Synthase From Alfalfa Complexed With Hexan		1e-130
1bq6_A	388	Chalcone Synthase From Alfalfa With Coenzyme A Leng		1e-130
1bi5_A	389	Chalcone Synthase From Alfalfa Length = 389		1e-130
1qlv_A	402	Pyrone Synthase (Pys) From Gerbera Hybrida Length =		1e-130
3tsy_A	979	4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr		1e-130
1i86_A	389	Chalcone Synthase, G256a Mutant Length = 389		1e-130
1d6h_A	387	Chalone Synthase (N336a Mutant Complexed With Coa)		1e-130
1jwx_A	389	Chalcone Synthase--F215s Mutant Length = 389		1e-130
1d6i_A	388	Chalcone Synthase (H303q Mutant) Length = 388		1e-130
1i8b_A	389	Chalcone Synthase (g256f) Length = 389		1e-129
1i88_A	389	Chalcone Synthase (G256v) Length = 389		1e-129
1i89_A	389	Chalcone Synthase (G256l) Length = 389		1e-129
1u0v_A	393	An Aldol Switch Discovered In Stilbene Synthases Me		1e-128
1z1e_A	390	Crystal Structure Of Stilbene Synthase From Arachis		1e-125
1u0u_A	397	An Aldol Switch Discovered In Stilbene Synthases Me		1e-117
1xes_A	413	Crystal Structure Of Stilbene Synthase From Pinus S		1e-117
3awj_A	402	Crystal Structure Of The Huperzia Serrata Polyketid		1e-115
3ov3_A	393	G211f Mutant Of Curcumin Synthase 1 From Curcuma Lo		1e-113
3ov2_A	393	Curcumin Synthase 1 From Curcuma Longa Length = 393		1e-113
2d51_A	406	Pentaketide Chromone Synthase (M207g Mutant) Length		1e-105
2p0u_A	413	Crystal Structure Of Marchantia Polymorpha Stilbene		1e-105
2d3m_A	406	Pentaketide Chromone Synthase Complexed With Coenzy		1e-105
3ale_A	416	A Type Iii Polyketide Synthase That Produces Diaryl		6e-89
3oit_A	387	Crystal Structure Of Curcuminoid Synthase Cus From		2e-88
2h84_A	374	Crystal Structure Of The C-terminal Type Iii Polyke		4e-36
1tee_A	393	Crystal Structure Of C205f Mutant Of Pks18 From Myc		1e-23
1ted_A	393	Crystal Structure Of A Type Iii Polyketide Synthase		3e-23
3e1h_A	465	Crystal Structure Of A Type Iii Polyketide Synthase		3e-16
3euq_A	379	X-Ray Structural Of A Type Iii Pentaketide Synthase		4e-16
3euo_A	379	Crystal Structure Of A Fungal Type Iii Polyketide S		5e-15
1u0m_A	382	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		1e-12
3v7i_A	413	Germicidin Synthase (Gcs) From Streptomyces Coelico		2e-06

>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387

Iteration: 1
 Score =  467 bits (1201), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 224/372 (60%), Positives = 272/372 (73%), Gaps = 1/372 (0%)
Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           AT++AIGT+ PPNC+YQAD+PDFYFRVTNSDH   LK+KFKR+CE   I+KRY H+TEEI
Sbjct: 13  ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
           LKENPN+  YEA SL+ R  M +  V +LGKEAALKAIKEWGQP SKITHLI     GVD
Sbjct: 73  LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
           MPGAD +L +LL L PSV R M Y  GCY GGTV+RLAKDIAENN GARVL+VCS++   
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
            F  PSETHLD ++ QA+F                  E P+F+++S  QT VP++   I 
Sbjct: 193 CFRGPSETHLDSMIGQALF-GDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIE 251
Query: 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEK 323
           G L E G   HL + VP  I N +  CLS+A +P+ ISDWNSLF++ HPGG  +LDQV  
Sbjct: 252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTA 311
Query: 324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP 383
            +GL KEKL  +R VL++YGNM + +VFFI+DE+RKKS+E  +ATTGEGLE GVLFGFGP
Sbjct: 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGP 371
Query: 384 GLTVETVVLQSV 395
           G+TVETVVL+SV
Sbjct: 372 GITVETVVLRSV 383

>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389

Iteration: 1
 Score =  466 bits (1199), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/385 (58%), Positives = 283/385 (73%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QGC+ GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387

Iteration: 1
 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/372 (59%), Positives = 271/372 (72%), Gaps = 1/372 (0%)
Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           AT++AIGT+ PPNC+YQAD+PDFYFRVTNSDH   LK+KFKR+CE   I+KRY H+TEEI
Sbjct: 13  ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
           LKENPN+  YEA SL+ R  M +  V +LGKEAALKAIKEWGQP SKITHLI     GVD
Sbjct: 73  LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
           MPGAD +L +LL L PSV R M Y  GCY GGTV+RLAKDIAENN GARVL+VCS++   
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
            F  PSETHLD ++ QA+                   E P+F+++S  QT VP++   I 
Sbjct: 193 CFRGPSETHLDSMIGQAIL-GDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIE 251
Query: 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEK 323
           G L E G   HL + VP  I N +  CLS+A +P+ ISDWNSLF++ HPGG  +LDQV  
Sbjct: 252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTA 311
Query: 324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP 383
            +GL KEKL  +R VL++YGNM + +VFFI+DE+RKKS+E  +ATTGEGLE GVLFGFGP
Sbjct: 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGP 371
Query: 384 GLTVETVVLQSV 395
           G+TVETVVL+SV
Sbjct: 372 GITVETVVLRSV 383

>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389

Iteration: 1
 Score =  462 bits (1190), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/385 (58%), Positives = 282/385 (73%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389

Iteration: 1
 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/385 (58%), Positives = 282/385 (73%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGSFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388

Iteration: 1
 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/385 (58%), Positives = 282/385 (73%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 5   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 63
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 64  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 123
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 124 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 183
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 184 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 242
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 243 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 302
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 303 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 362
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 363 GLEWGVLFGFGPGLTIETVVLRSVA 387

>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389

Iteration: 1
 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/385 (58%), Positives = 282/385 (73%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402

Iteration: 1
 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 221/372 (59%), Positives = 278/372 (74%), Gaps = 1/372 (0%)
Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           ATILAIGT+TPPNC  QADY D+YFRVT S+H  +LKEKFKRICE+ +IKKRY  LTE+ 
Sbjct: 22  ATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDY 81
Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
           L+ENP MC + APSL+ARQ +++  VP LGKEAA+KAI EWG P SKITHLIF    GVD
Sbjct: 82  LQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVD 141
Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
           MPGAD +L++LLGL PSV R M+Y QG   GGTV+RLAKD+AENN G+RVL+VCS+I  +
Sbjct: 142 MPGADYQLVKLLGLSPSVKRYMLYQQGXAAGGTVLRLAKDLAENNKGSRVLIVCSEITAI 201
Query: 204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
            FH P+E HLD LV QA+F                  E P+F+I+S  QT +PDTE  + 
Sbjct: 202 LFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAV-ERPIFEIVSTDQTILPDTEKAMK 260
Query: 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEK 323
             L+E G    L RDVP+ +   ++     A+SP+GI+DWNS+F++VHPGG  +LDQVE+
Sbjct: 261 LHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVER 320
Query: 324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGP 383
            L L+++KL ASR+VL EYGN+ +  V FI+DEVRK+S+ E K+TTGEGL+CGVLFGFGP
Sbjct: 321 KLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGP 380
Query: 384 GLTVETVVLQSV 395
           G+TVETVVL+SV
Sbjct: 381 GMTVETVVLRSV 392

>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979

Iteration: 1
 Score =  461 bits (1187), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/376 (59%), Positives = 281/376 (74%), Gaps = 2/376 (0%)
Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
           +GP ATILAIGT+TP +C YQ+DY D+YF+VT S+H T LK+KF RIC++  IKKRY HL
Sbjct: 601 KGP-ATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHL 659
Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
           TEE+L+E+PN+  Y APSL+ RQ ++  EVPKLGKEAALKA+KEWGQP SKITHL+F   
Sbjct: 660 TEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTT 719
Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            GV+MPGAD +L  LLGL+PSV R+M+Y QGCY GGTV+R AKD+AENN GARVLVVCS+
Sbjct: 720 SGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSE 779
Query: 200 IRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTE 259
           I V+ F  PSE  LD LV QA+F                + E PLFQ++S  QT +P++ 
Sbjct: 780 ITVVTFRGPSEDALDSLVGQALF-GDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSA 838
Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
             I+G L+E+G   HL  +VP  I   V+KCL+ A  P+GISDWNSLF++ HPGG  +LD
Sbjct: 839 GAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILD 898
Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
            VE  L L K+KL A+R+VL EYGNM +  V FILDE+RKKS++  +ATTGEGL+ GVLF
Sbjct: 899 AVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLF 958
Query: 380 GFGPGLTVETVVLQSV 395
           GFGPGLT+ETVVL S+
Sbjct: 959 GFGPGLTIETVVLHSI 974

>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389

Iteration: 1
 Score =  460 bits (1183), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I   L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDAHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387

Iteration: 1
 Score =  459 bits (1182), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 4   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 62
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 63  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 122
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 123 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 182
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 183 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 241
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 242 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 301
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYG M +  V FILDE+RKKS +    TTGE
Sbjct: 302 PGGPAILDQVEQKLALKPEKMNATREVLSEYGAMSSACVLFILDEMRKKSTQNGLKTTGE 361
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 362 GLEWGVLFGFGPGLTIETVVLRSVA 386

>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389

Iteration: 1
 Score =  459 bits (1182), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/385 (58%), Positives = 280/385 (72%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA                    E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQA-LSGDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388

Iteration: 1
 Score =  459 bits (1182), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 5   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 63
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 64  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 123
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 124 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 183
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 184 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 242
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++  
Sbjct: 243 QTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAQ 302
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 303 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 362
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 363 GLEWGVLFGFGPGLTIETVVLRSVA 387

>pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389

Iteration: 1
 Score =  459 bits (1180), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I   L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDFHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389

Iteration: 1
 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I   L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389

Iteration: 1
 Score =  458 bits (1178), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/385 (58%), Positives = 281/385 (72%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 6   EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 64
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 65  IKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKI 124
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI     GVDMPGAD +L +LLGL+P V R M+Y QG + GGTV+RLAKD+AENN GA
Sbjct: 125 THLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGA 184
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 185 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 243
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I   L+E G   HL +DVP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 244 QTIAPDSEGAIDLHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAH 303
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 304 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 363
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 364 GLEWGVLFGFGPGLTIETVVLRSVA 388

>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393

Iteration: 1
 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/385 (57%), Positives = 279/385 (72%), Gaps = 2/385 (0%)
Query: 12  DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           ++   +  +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  
Sbjct: 10  EIRKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSM 68
Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK+RY +LTEEILKENPN+C Y APSLDARQAML  EVP+LGKEAA+KAIKEWGQP SKI
Sbjct: 69  IKRRYMYLTEEILKENPNVCEYMAPSLDARQAMLAMEVPRLGKEAAVKAIKEWGQPKSKI 128
Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
           THLI  +    D+PGAD +L +LLGL+P V R+ ++  GC+ GGTV+RLAKD+AENN GA
Sbjct: 129 THLIVCSTTTPDLPGADYQLTKLLGLRPYVKRVGVFQHGCFAGGTVLRLAKDLAENNKGA 188
Query: 192 RVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCT 251
           RVLVVCS++  + F  PS+THLD LV QA+F                  E P+F+++   
Sbjct: 189 RVLVVCSEVTAVTFRGPSDTHLDSLVGQALF-GDGAAALIVGSDPVPEIEKPIFEMVWTA 247
Query: 252 QTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVH 311
           QT  PD+E  I G L+E G   HL   VP  +   + K L  A  P+GISD+NS+F++ H
Sbjct: 248 QTIAPDSEGAIDGHLREAGLTFHLKGAVPDIVSKNITKALVEAFEPLGISDYNSIFWIAH 307
Query: 312 PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE 371
           PGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +    TTGE
Sbjct: 308 PGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGE 367
Query: 372 GLECGVLFGFGPGLTVETVVLQSVS 396
           GLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 368 GLEWGVLFGFGPGLTIETVVLRSVA 392

>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390

Iteration: 1
 Score =  445 bits (1144), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 218/381 (57%), Positives = 279/381 (73%), Gaps = 2/381 (0%)
Query: 16  VKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKR 75
           V+  +GP AT+LAIGT+ PPNC  Q+ Y D+YFRVTNS+H T+LK+KF+RICER  IK R
Sbjct: 11  VQRAEGP-ATVLAIGTANPPNCVDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNR 69
Query: 76  YFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLI 135
           + +LTEEILKENPNMC Y+APSLDAR+ M+I EVP++GKEAA KAIKEWGQP+SKITHLI
Sbjct: 70  HMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLI 129
Query: 136 FSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLV 195
           F    GV +PG D  L+ LLGL PSV R M+Y QGC+ GGTV+RLAKD+AENN  ARVL+
Sbjct: 130 FCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLI 189
Query: 196 VCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTV 255
           VCS+   + F  PSET +D LV QA+F                  E+PLF+I+S  Q  V
Sbjct: 190 VCSENTSVTFRGPSETDMDSLVGQALF-ADGAAAIIIGSDPVPEVENPLFEIVSTDQQLV 248
Query: 256 PDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGD 315
           P++   I G L+E+G   +L++ VP  I   ++  LS A  P+GISD+NS+F++ HPGG 
Sbjct: 249 PNSHGAIGGLLREVGLTFYLNKSVPDIISQNINDALSKAFDPLGISDYNSIFWIAHPGGR 308
Query: 316 GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLEC 375
            +LDQVE+ + L+ EK+ A+R VL  YGNM +  VFFI+D +RKKS+E    TTGEGL+ 
Sbjct: 309 AILDQVEEKVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMRKKSLEAGLKTTGEGLDW 368
Query: 376 GVLFGFGPGLTVETVVLQSVS 396
           GVLFGFGPGLT+ETVVL+S++
Sbjct: 369 GVLFGFGPGLTIETVVLRSMA 389

>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397

Iteration: 1
 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/373 (55%), Positives = 262/373 (70%), Gaps = 2/373 (0%)
Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           A+ILAIGT+ PPN   Q+ YPDFYFR+T ++H TELK+KFKRICER +IK+RY +LTEEI
Sbjct: 23  ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEI 82
Query: 84  LKENPNMCCY-EAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
           LK+NP++C + E PSLDARQAML  EVP+L KEAA KAI+EWGQ  S ITHLIF +    
Sbjct: 83  LKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP 142
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
           D+PGAD  + +LLGL PSV R+ ++  GC+ GGTV+R+AKD+AENN GARVLV+CS+   
Sbjct: 143 DLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTA 202
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
           + F  PSETHLD LV QA+F                  E   F+I+   QT VP++E  I
Sbjct: 203 VTFRGPSETHLDSLVGQALF-GDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAI 261
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVE 322
            G+++E+G    L   VP  I   ++ C+  A S   ISDWN LF+VVHPGG  +LD+VE
Sbjct: 262 GGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVE 321
Query: 323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382
             L L   KL  +R+V+ EYGNM +  V FILD+ RK S++   +TTGEGLE GVLFGFG
Sbjct: 322 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFG 381
Query: 383 PGLTVETVVLQSV 395
           PGLT+ETVVL+SV
Sbjct: 382 PGLTIETVVLKSV 394

>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413

Iteration: 1
 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/373 (55%), Positives = 262/373 (70%), Gaps = 2/373 (0%)
Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           A+ILAIGT+ PPN   Q+ YPDFYFR+T ++H TELK+KFKRICER +IK+RY +LTEEI
Sbjct: 39  ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEI 98
Query: 84  LKENPNMCCY-EAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
           LK+NP++C + E PSLDARQAML  EVP+L KEAA KAI+EWGQ  S ITHLIF +    
Sbjct: 99  LKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTP 158
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
           D+PGAD  + +LLGL PSV R+ ++  GC+ GGTV+R+AKD+AENN GARVLV+CS+   
Sbjct: 159 DLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTA 218
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
           + F  PSETHLD LV QA+F                  E   F+I+   QT VP++E  I
Sbjct: 219 VTFRGPSETHLDSLVGQALF-GDGASALIVGADPIPQVEKACFEIVWTAQTVVPNSEGAI 277
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVE 322
            G+++E+G    L   VP  I   ++ C+  A S   ISDWN LF+VVHPGG  +LD+VE
Sbjct: 278 GGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVE 337
Query: 323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382
             L L   KL  +R+V+ EYGNM +  V FILD+ RK S++   +TTGEGLE GVLFGFG
Sbjct: 338 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFG 397
Query: 383 PGLTVETVVLQSV 395
           PGLT+ETVVL+SV
Sbjct: 398 PGLTIETVVLKSV 410

>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402

Iteration: 1
 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/376 (53%), Positives = 263/376 (69%), Gaps = 2/376 (0%)
Query: 21  GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLT 80
           GP ATILAIGTS P N F Q+ YPDF+F VTN + KTELK+KF+RIC++  IKKR+FHLT
Sbjct: 28  GP-ATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHLT 86
Query: 81  EEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFY 140
           +EIL++NP++C ++  SLD RQ + + EVPKL KEAA+ AIK+WGQP SKITHL+F+   
Sbjct: 87  DEILRKNPSICKFKEASLDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTS 146
Query: 141 GVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 200
           GVDMPGAD +L +LLGL+P+V R+M+Y QG Y G TV+R+AKD+AENN GARVLV CS++
Sbjct: 147 GVDMPGADFQLAKLLGLRPTVKRVMLYQQGXYAGATVLRVAKDLAENNKGARVLVACSEV 206
Query: 201 RVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTEN 260
             + F  PSETHLD LV  A+F                  E PLF+I    +  +PD++ 
Sbjct: 207 TAVTFRAPSETHLDGLVGSALF-GDGAAALIVGSDPVPQEEKPLFEIHWAGEAVLPDSDG 265
Query: 261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQ 320
            I+G L+E G   HL +DVP  I   +DK L+  +  +    +N +F+ VHPGG  +LDQ
Sbjct: 266 AINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDMFWAVHPGGPAILDQ 325
Query: 321 VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFG 380
           +E  LGL  +K+ ASR VL  YGNM + SV F+LD++RK S E    TTGEG E G + G
Sbjct: 326 IEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEELHLPTTGEGFEWGFVIG 385
Query: 381 FGPGLTVETVVLQSVS 396
           FGPGLTVET++L+S++
Sbjct: 386 FGPGLTVETLLLRSIN 401

>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa Length = 393

Iteration: 1
 Score =  405 bits (1042), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 189/388 (48%), Positives = 268/388 (69%), Gaps = 2/388 (0%)
Query: 8   SRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRIC 67
           + L+ +   +  QGP ATI+AIGT+TPPN + Q+ +PDFYFRVTNSD K ELK+KF+R+C
Sbjct: 2   ANLHALRREQRAQGP-ATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 68  ERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQP 127
           E+  +KKRY HLTEEILKE P +C Y+  S D RQ ++++E+P+L KEAA KAIKEWG+P
Sbjct: 61  EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 128 VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187
            S+ITHL+F +  G+DMPGAD RL  LLGL  +VNRLMIY+Q C+MG  ++R+AKD+AEN
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQI 247
           N GARVLVV  +I VL F  P+E   + L  QA F                  E P+++I
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAFQAGF-GDGAGAVVVGADPLEGIEKPIYEI 239
Query: 248 LSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLF 307
            +  Q TV +++  + G L+  G   +    +P  I + + + L  A++P+G+ +WN +F
Sbjct: 240 AAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVF 299
Query: 308 YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA 367
           +V HPG   ++D +E  L L  +KL  +R+V  EYGNM + +V+F++DE+RK+S  E ++
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 368 TTGEGLECGVLFGFGPGLTVETVVLQSV 395
           TTG+GL+ GVL GFGPGL++ETVVL+S+
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVVLRSM 387

>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa Length = 393

Iteration: 1
 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 189/388 (48%), Positives = 268/388 (69%), Gaps = 2/388 (0%)
Query: 8   SRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRIC 67
           + L+ +   +  QGP ATI+AIGT+TPPN + Q+ +PDFYFRVTNSD K ELK+KF+R+C
Sbjct: 2   ANLHALRREQRAQGP-ATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 68  ERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQP 127
           E+  +KKRY HLTEEILKE P +C Y+  S D RQ ++++E+P+L KEAA KAIKEWG+P
Sbjct: 61  EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 128 VSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN 187
            S+ITHL+F +  G+DMPGAD RL  LLGL  +VNRLMIY+Q C+MG  ++R+AKD+AEN
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 188 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQI 247
           N GARVLVV  +I VL F  P+E   + L  QA F                  E P+++I
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAGQAGF-GDGAGAVVVGADPLEGIEKPIYEI 239
Query: 248 LSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLF 307
            +  Q TV +++  + G L+  G   +    +P  I + + + L  A++P+G+ +WN +F
Sbjct: 240 AAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVF 299
Query: 308 YVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA 367
           +V HPG   ++D +E  L L  +KL  +R+V  EYGNM + +V+F++DE+RK+S  E ++
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 368 TTGEGLECGVLFGFGPGLTVETVVLQSV 395
           TTG+GL+ GVL GFGPGL++ETVVL+S+
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVVLRSM 387

>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant) Length = 406

Iteration: 1
 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/376 (50%), Positives = 253/376 (67%), Gaps = 4/376 (1%)
Query: 23  TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEE 82
           TAT++AIGT+ PP+ F Q  Y D YFR TNS+HK ELK+KF  IC++  I KRYF+  EE
Sbjct: 29  TATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEE 88
Query: 83  ILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
            LK+ PN+  Y+ PSL+ RQ + +  VP LG EAA+KAI+EWG+P S+ITHL+F    GV
Sbjct: 89  FLKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGV 148
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
           DMP AD +  +LLGL  +VN+  IY QG Y GGTV+R AKD+AENN GARVLVVC+++ +
Sbjct: 149 DMPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELTI 208
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
           +    P+ETHLD  +  ++F                  E P+F+I+   QT +P+TE+ I
Sbjct: 209 MGLRAPNETHLDNAIGISLF-GDGAAALIIGSDPIIGVEKPMFEIVCTKQTVIPNTEDVI 267
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS---DWNSLFYVVHPGGDGLLD 319
              L+E G   +LS+  P+ I N V+ CL +    +GI+   DWNSLF++ HPGG  +LD
Sbjct: 268 HLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAILD 327
Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QVE  L LR EK  A+R VL +YGNM + SV +ILDE+R+KS  +   T GEGLE GVL 
Sbjct: 328 QVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLL 387
Query: 380 GFGPGLTVETVVLQSV 395
           GFGPG+TVET++L S+
Sbjct: 388 GFGPGITVETILLHSL 403

>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413

Iteration: 1
 Score =  377 bits (969), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/390 (47%), Positives = 257/390 (65%), Gaps = 7/390 (1%)
Query: 6   SNSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKR 65
           S SRL     +    GP AT+LA+G + P N F QA YPDF+F +TNS+ K  LK KF+R
Sbjct: 23  SRSRL-----IAQAVGP-ATVLAMGKAVPANVFEQATYPDFFFNITNSNDKPALKAKFQR 76
Query: 66  ICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWG 125
           IC++  IKKR+F+L ++IL+ NP MC Y   SL+ RQ + + +VPKL KEA++ AIKEWG
Sbjct: 77  ICDKSGIKKRHFYLDQKILESNPAMCTYMETSLNCRQEIAVAQVPKLAKEASMNAIKEWG 136
Query: 126 QPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA 185
           +P S+ITH++ +   GV+MPGA++   +LLGL+P+V R+M+Y QG + G TV+R+AKD+A
Sbjct: 137 RPKSEITHIVMATTSGVNMPGAELATAKLLGLRPNVRRVMMYQQGXFAGATVLRVAKDLA 196
Query: 186 ENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLF 245
           ENN GARVL +CS++  + F  PSETH+D LV  A+F                  E P++
Sbjct: 197 ENNAGARVLAICSEVTAVTFRAPSETHIDGLVGSALF-GDGAAAVIVGSDPRPGIERPIY 255
Query: 246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNS 305
           ++    +  +P+++  I G L E G   HL +DVP  I   +   L +  + +G S WN 
Sbjct: 256 EMHWAGEMVLPESDGAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNE 315
Query: 306 LFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEM 365
           LF+ VHPGG  +LDQVE  L L K K  ASR +L +YGNM + SV F+LD VR++S+E  
Sbjct: 316 LFWAVHPGGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLESN 375
Query: 366 KATTGEGLECGVLFGFGPGLTVETVVLQSV 395
           K+T GEG E G L GFGPGLTVET++L+++
Sbjct: 376 KSTFGEGSEWGFLIGFGPGLTVETLLLRAL 405

>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A Length = 406

Iteration: 1
 Score =  377 bits (967), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/376 (50%), Positives = 253/376 (67%), Gaps = 4/376 (1%)
Query: 23  TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEE 82
           TAT++AIGT+ PP+ F Q  Y D YFR TNS+HK ELK+KF  IC++  I KRYF+  EE
Sbjct: 29  TATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDEE 88
Query: 83  ILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
            LK+ PN+  Y+ PSL+ RQ + +  VP LG EAA+KAI+EWG+P S+ITHL+F    GV
Sbjct: 89  FLKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCGV 148
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
           DMP AD +  +LLGL  +VN+  IY QG Y GGTV+R AKD+AENN GARVLVVC+++ +
Sbjct: 149 DMPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELTI 208
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
           +    P+ETHLD  +  ++F                  E P+F+I+   QT +P+TE+ I
Sbjct: 209 MMLRAPNETHLDNAIGISLF-GDGAAALIIGSDPIIGVEKPMFEIVCTKQTVIPNTEDVI 267
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS---DWNSLFYVVHPGGDGLLD 319
              L+E G   +LS+  P+ I N V+ CL +    +GI+   DWNSLF++ HPGG  +LD
Sbjct: 268 HLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAILD 327
Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QVE  L LR EK  A+R VL +YGNM + SV +ILDE+R+KS  +   T GEGLE GVL 
Sbjct: 328 QVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVLL 387
Query: 380 GFGPGLTVETVVLQSV 395
           GFGPG+TVET++L S+
Sbjct: 388 GFGPGITVETILLHSL 403

>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416

Iteration: 1
 Score =  324 bits (830), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 175/396 (44%), Positives = 243/396 (61%), Gaps = 10/396 (2%)
Query: 7   NSRLYDMTTVKSNQGPT--ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFK 64
            S LY +  ++ +Q     A +LAIGT+ PPNC  Q + PDFYFRVTNSDH T LK+KFK
Sbjct: 22  GSALYPLGEMRRSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFK 81
Query: 65  RICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEW 124
           RIC+   +++RY H TEE+L  +P     +APSLDAR  +  D VP+L  EAA KAI EW
Sbjct: 82  RICQEMGVQRRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEW 141
Query: 125 GQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184
           G+P + ITHL+ +   G  +PG D RL+ LLGL+PSV R M++  GC+ G   +RLAKD+
Sbjct: 142 GRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDL 201
Query: 185 AENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPL 244
           AEN+ GARVLVV +++ ++ F  P E     L+VQ +F                + E PL
Sbjct: 202 AENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLF--GDGAAAVIVGADADDVERPL 259
Query: 245 FQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSN----AMSPIGI 300
           F+I+S  QT +P++++ ++ +  E      L R VP  IG+ V++CL +     +   G 
Sbjct: 260 FEIVSAAQTIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGG 319
Query: 301 SDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK 360
             WN LF+ VHPG   ++DQV+  LGL   KL ASR VL +YGNM   +V F LDE+R++
Sbjct: 320 GGWNDLFWAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQ 379
Query: 361 SIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396
             E   A  GE  E GV+  FGPG+TV+ ++L + S
Sbjct: 380 RKE--AAAAGEWPELGVMMAFGPGMTVDAMLLHATS 413

>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387

Iteration: 1
 Score =  322 bits (826), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 171/377 (45%), Positives = 235/377 (62%), Gaps = 8/377 (2%)
Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           A +LAIGT+ PPNC  Q + PDFYFRVTNSDH T LK+KFKRIC+   +++RY H TEE+
Sbjct: 11  AAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEM 70
Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
           L  +P     +APSLDAR  +  D VP+L  EAA KAI EWG+P + ITHL+ +   G  
Sbjct: 71  LSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH 130
Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
           +PG D RL+ LLGL+PSV R M++  GC+ G   +RLAKD+AEN+ GARVLVV +++ ++
Sbjct: 131 VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLM 190
Query: 204 DFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYIS 263
            F  P E     L+VQ +F                + E PLF+I+S  QT +P++++ ++
Sbjct: 191 YFTGPDEGCFRTLLVQGLF--GDGAAAVIVGADADDVERPLFEIVSAAQTIIPESDHALN 248
Query: 264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSN----AMSPIGISDWNSLFYVVHPGGDGLLD 319
            +  E      L R VP  IG+ V++CL +     +   G   WN LF+ VHPG   ++D
Sbjct: 249 MRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMD 308
Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
           QV+  LGL   KL ASR VL +YGNM   +V F LDE+R++  E   A  GE  E GV+ 
Sbjct: 309 QVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKE--AAAAGEWPELGVMM 366
Query: 380 GFGPGLTVETVVLQSVS 396
            FGPG+TV+ ++L + S
Sbjct: 367 AFGPGMTVDAMLLHATS 383

>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374

Iteration: 1
 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 30/387 (7%)
Query: 17  KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNS-DHKTELKEKFKRICERQSIKKR 75
           KSN    + +L IG S P     Q    D    ++N    K E  EK KRI E+  IK R
Sbjct: 9   KSNN--NSFVLGIGISVPGEPISQQSLKD---SISNDFSDKAETNEKVKRIFEQSQIKTR 63
Query: 76  YFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLI 135
             HL  +  K   ++      ++          VP L ++A L+A+K+WG     ITH++
Sbjct: 64  --HLVRDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIV 121
Query: 136 FSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLV 195
                G+ +P  + +L+ LLGL   V R+ +   GC  G + +R A  +A+ +P  R+LV
Sbjct: 122 SVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILV 181
Query: 196 VCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTV 255
           VC+++  L F        D +V  ++F                  E+PL++++     + 
Sbjct: 182 VCTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGCNPRI--EETPLYEVMCSINRSF 237
Query: 256 PDTENYISGQLKEMGTYCHLSRDVPVAIGN----YVDKCLSNA--MSPIGISDWNSLFYV 309
           P+TEN +   L++ G    L   +P+ IG+    +VD  L  A   +   IS  +  F +
Sbjct: 238 PNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEF-L 296
Query: 310 VHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK-KSIEEMKAT 368
           +H GG  +L  +E +LG+  ++   +  V   YGNM + SV F++D  RK KS+      
Sbjct: 297 IHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKSLPTYS-- 354
Query: 369 TGEGLECGVLFGFGPGLTVETVVLQSV 395
                   +   FGPGL  E   L++V
Sbjct: 355 --------ISLAFGPGLAFEGCFLKNV 373

>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 160/366 (43%), Gaps = 13/366 (3%)
Query: 23  TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEE 82
            A I  + T TP     Q+D  D   RV         +E+  R+ ++  I  R   +  +
Sbjct: 32  VAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTR--RMAVD 86
Query: 83  ILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
            L    ++   E  ++  R  +  +    L  + + +A+       ++I  L+ +   G 
Sbjct: 87  PLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF 146
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
             PG DV +++ LGL PS++R+++   GC      +  A +    +P  + LVVC  I +
Sbjct: 147 IAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVC--IEL 204
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
              +      ++ +V+ ++F                  E     + S     + +TE+ I
Sbjct: 205 FSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGI 264
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVE 322
              +   G  C LS ++P  I + V   ++  +   G+   +   + +HPGG  +++Q  
Sbjct: 265 VLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSV 324
Query: 323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382
           ++LG+  E    S  VL  +GNM + S+ F+L+ + +      +A + + +  GV F FG
Sbjct: 325 RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAFG 378
Query: 383 PGLTVE 388
           PG+TVE
Sbjct: 379 PGVTVE 384

>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 160/366 (43%), Gaps = 13/366 (3%)
Query: 23  TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEE 82
            A I  + T TP     Q+D  D   RV         +E+  R+ ++  I  R   +  +
Sbjct: 32  VAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTR--RMAVD 86
Query: 83  ILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGV 142
            L    ++   E  ++  R  +  +    L  + + +A+       ++I  L+ +   G 
Sbjct: 87  PLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGF 146
Query: 143 DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 202
             PG DV +++ LGL PS++R+++   GC      +  A +    +P  + LVVC  I +
Sbjct: 147 IAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVC--IEL 204
Query: 203 LDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYI 262
              +      ++ +V+ ++F                  E     + S     + +TE+ I
Sbjct: 205 CSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGI 264
Query: 263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVE 322
              +   G  C LS ++P  I + V   ++  +   G+   +   + +HPGG  +++Q  
Sbjct: 265 VLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSV 324
Query: 323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFG 382
           ++LG+  E    S  VL  +GNM + S+ F+L+ + +      +A + + +  GV F FG
Sbjct: 325 RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAFG 378
Query: 383 PGLTVE 388
           PG+TVE
Sbjct: 379 PGVTVE 384

>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pksiiinc From Neurospora Crassa Length = 465

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 27/340 (7%)
Query: 75  RYFHLTEEILKENPNMCCYEAPS----LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSK 130
           RY  + +     NP+      P+     +  +  + D VP L  EA+ KA+ E     ++
Sbjct: 73  RYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSDGVP-LAVEASRKAMAEARLVPAQ 131
Query: 131 ITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI-----A 185
           ITH++ +       PG D  + + LGL   + +++++  GC  G   +R A ++     A
Sbjct: 132 ITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTA 191
Query: 186 ENNPGARVLVVCSDIRVLDFHEPSETHLDVL----VVQAVFXXXXXXXXXXXXXXXXNHE 241
              P AR+LV+  ++         E+ +D L    +  A+F                  +
Sbjct: 192 RGKP-ARILVLALEVSTTMVRSELES-IDALQETRIGIALFSDCASAVILSNGIGEAPGK 249
Query: 242 SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS----- 296
             ++ +L      +PD+E+ +   +  MG    LS  VPV     +    ++ +S     
Sbjct: 250 PAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQ 309
Query: 297 -PIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWAS--RYVLREYGNMGAPSVFFI 353
            P          + +HPGG  +L   E  +GL  E + AS  RY+   +GN  + ++F +
Sbjct: 310 LPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYI--NHGNSSSATIFSV 367
Query: 354 LDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
           L+ +R+K ++ + A  G+  E  V   FGPG+ VE  +L+
Sbjct: 368 LNRLREKDMDAL-APGGKVKEYVVGCAFGPGINVEMCMLK 406

>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From Neurospora Crassa Length = 379

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 149/340 (43%), Gaps = 27/340 (7%)
Query: 75  RYFHLTEEILKENPNMCCYEAPS----LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSK 130
           RY  + +     NP+      P+     +  +  + D VP L  EA+ KA+ E     ++
Sbjct: 44  RYTGIDQRSSIGNPDHPLVNKPNPPTVKELHEVFMSDGVP-LAVEASRKAMAEARLVPAQ 102
Query: 131 ITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI-----A 185
           ITH++ +       PG D  + + LGL   + +++++  G   G   +R A ++     A
Sbjct: 103 ITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGXSGGLAALRTAANLCLGHTA 162
Query: 186 ENNPGARVLVVCSDIRVLDFHEPSETHLDVL----VVQAVFXXXXXXXXXXXXXXXXNHE 241
              P AR+LV+  ++         E+ +D L    +  A+F                  +
Sbjct: 163 RGKP-ARILVLALEVSTTMVRSELES-IDALQETRIGIALFSDCASAVILSNGIGEAPGK 220
Query: 242 SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS----- 296
             ++ +L      +PD+E+ + G +  MG    LS  VPV     +    ++ +S     
Sbjct: 221 PAIYDLLGWENRVIPDSEHDLGGDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQ 280
Query: 297 -PIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWAS--RYVLREYGNMGAPSVFFI 353
            P          + +HPGG  +L   E  +GL  E + AS  RY+   +GN  + ++F +
Sbjct: 281 LPSSYQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYI--NHGNSSSATIFSV 338
Query: 354 LDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
           L+ +R+K ++ + A  G+  E  V   FGPG+ VE  +L+
Sbjct: 339 LNRLREKDMDAL-APGGKVKEYVVGCAFGPGINVEMCMLK 377

>pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide Synthase, Oras Length = 379

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 138/309 (44%), Gaps = 23/309 (7%)
Query: 102 QAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSV 161
           +  + D VP L  EA+ KA+ E     ++ITH++ +       PG D  + + LGL   +
Sbjct: 75  EVFMSDGVP-LAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRL 133
Query: 162 NRLMIYTQGCYMGGTVIRLAKDI-----AENNPGARVLVVCSDIRVLDFHEPSETHLDVL 216
            +++++  G   G   +R A ++     A   P AR+LV+  ++         E+ +D L
Sbjct: 134 EKVLLHGIGXSGGLAALRTAANLCLGHTARGKP-ARILVLALEVSTTMVRSELES-IDAL 191
Query: 217 ----VVQAVFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYISGQLKEMGTY 272
               +  A+F                  +  ++ +L      +PD+E+ +   +  MG  
Sbjct: 192 QETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWK 251
Query: 273 CHLSRDVPVAIGNYVDKCLSNAMS------PIGISDWNSLFYVVHPGGDGLLDQVEKTLG 326
             LS  VPV     +    ++ +S      P          + +HPGG  +L   E  +G
Sbjct: 252 VVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPGGATILSGAESAMG 311
Query: 327 LRKEKLWAS--RYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPG 384
           L  E + AS  RY+   +GN  + ++F +L+ +R+K ++ + A  G+  E  V   FGPG
Sbjct: 312 LTPEHMRASYDRYI--NHGNSSSATIFSVLNRLREKDMDAL-APGGKVKEYVVGCAFGPG 368
Query: 385 LTVETVVLQ 393
           + VE  +L+
Sbjct: 369 INVEMCMLK 377

>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 131/328 (39%), Gaps = 31/328 (9%)
Query: 65  RICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEW 124
           R+ E   ++ R  H+ + I          E P  + R  +   E          +A+ + 
Sbjct: 48  RLIENTGVRTR--HIVQPIED------TLEHPGFEDRNKVYEREAKSRVPAVIQRALDDA 99
Query: 125 GQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI 184
               + I  +I+ +  G  MP     L+  +G   +  ++ I   GC  GG  I  A D 
Sbjct: 100 ELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDF 159
Query: 185 AENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFXXXXXXXXXXXXXXXXNHESPL 244
               P A  L+V  +   L + +P++  +  L+   +F                      
Sbjct: 160 CTAYPEANALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAVVR------GRGGTG 212
Query: 245 FQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI-GISDW 303
            ++       +P TE++I   +K  G +  L + VP  +     + L+ A+  + G   W
Sbjct: 213 VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM-----EPLAPALKELAGEHGW 267
Query: 304 NSL---FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK 360
           ++    FY+VH GG  +LD +   L +       SR  L EYGN+ +     +LD +R+ 
Sbjct: 268 DASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASA---VVLDALRRL 324
Query: 361 SIEEMKATTGEGLECGVLFGFGPGLTVE 388
             E       EG   G+L GFGPG+T E
Sbjct: 325 FDE---GGVEEGAR-GLLAGFGPGITAE 348

>pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A Type Iii Polyketide Synthase Length = 413

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 117/294 (39%), Gaps = 24/294 (8%)
Query: 101 RQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS 160
           R A   + V   G+ AA  A++  G  V+ +  LI S      +PG DV L   L L+  
Sbjct: 129 RTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGD 188
Query: 161 VNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQA 220
              L      C  G   + LA D+   +P   VLVV S+  +   ++P++  L+ L+V+ 
Sbjct: 189 TMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEA-LSTTYQPADDTLESLIVRL 247
Query: 221 VFXXXXXXXXXXXXXXXXNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVP 280
           +F                +    + ++ +    T+P T +    + +  GT+  + R  P
Sbjct: 248 LFADTAVAAVVTGRPRPES----VLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGP 303
Query: 281 VAIGNYVDKCLS--NAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWAS--- 335
            A+   V               S W+    + HPGG  +L+ +E+T+       W S   
Sbjct: 304 RAVQETVTAMWEWLRVRYEDDPSSWHPDVLLAHPGGTRVLEYMEQTM----PDEWPSGLL 359
Query: 336 RYVLREY--GNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTV 387
            Y    Y  GN G  +VF IL     +   +    TG      VL+   PGLT 
Sbjct: 360 SYSRDSYTSGNRGGAAVFDIL-----RRAHDAGQKTG---SRAVLYAAAPGLTA 405

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	402
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	0.0
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	1e-168
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	1e-167
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	1e-167
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	1e-164
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	1e-161
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	1e-160
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	1e-159
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	1e-158
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	1e-157
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	1e-156
1u0m_A	382	Putative polyketide synthase; type III polyketide	1e-156
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	1e-148
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	1e-138
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	1e-136
3v7i_A	413	Putative polyketide synthase; type III polyketide	1e-133
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	1e-14
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	2e-12
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	2e-12
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	5e-12
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	8e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	3e-06
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	2e-05
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	8e-05
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	9e-05
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	3e-04
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	6e-04
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	7e-04

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979

 Score =  676 bits (1746), Expect = 0.0
 Identities = 234/396 (59%), Positives = 296/396 (74%), Gaps = 2/396 (0%)

Query: 2   KKEKSNSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKE 61
                 + + +    +  +GP  TILAIGT+TP +C YQ+DY D+YF+VT S+H T LK+
Sbjct: 583 GLGSGMASVEEFRNAQRAKGPA-TILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKK 641

Query: 62  KFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAI 121
           KF RIC++  IKKRY HLTEE+L+E+PN+  Y APSL+ RQ ++  EVPKLGKEAALKA+
Sbjct: 642 KFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKAL 701

Query: 122 KEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLA 181
           KEWGQP SKITHL+F    GV+MPGAD +L  LLGL+PSV R+M+Y QGCY GGTV+R A
Sbjct: 702 KEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTA 761

Query: 182 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHE 241
           KD+AENN GARVLVVCS+I V+ F  PSE  LD LV QA+FGDG+ A I+G+D DIS  E
Sbjct: 762 KDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISI-E 820

Query: 242 SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS 301
            PLFQ++S  QT +P++   I+G L+E+G   HL  +VP  I   V+KCL+ A  P+GIS
Sbjct: 821 RPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGIS 880

Query: 302 DWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKS 361
           DWNSLF++ HPGG  +LD VE  L L K+KL A+R+VL EYGNM +  V FILDE+RKKS
Sbjct: 881 DWNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKS 940

Query: 362 IEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST 397
           ++  +ATTGEGL+ GVLFGFGPGLT+ETVVL S+  
Sbjct: 941 LKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPM 976

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393

 Score =  473 bits (1219), Expect = e-167
 Identities = 198/392 (50%), Positives = 279/392 (71%), Gaps = 8/392 (2%)

Query: 13  MTTV------KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRI 66
           M  +      +  QGP ATI+AIGT+TPPN + Q+ +PDFYFRVTNSD K ELK+KF+R+
Sbjct: 1   MANLHALRREQRAQGP-ATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRM 59

Query: 67  CERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQ 126
           CE+  +KKRY HLTEEILKE P +C Y+  S D RQ ++++E+P+L KEAA KAIKEWG+
Sbjct: 60  CEKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGR 119

Query: 127 PVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE 186
           P S+ITHL+F +  G+DMPGAD RL  LLGL  +VNRLMIY+Q C+MG  ++R+AKD+AE
Sbjct: 120 PKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE 179

Query: 187 NNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQ 246
           NN GARVLVV  +I VL F  P+E   + L  QA FGDGAGA ++GAD  +   E P+++
Sbjct: 180 NNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGAD-PLEGIEKPIYE 238

Query: 247 ILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL 306
           I +  Q TV +++  + G L+  G   +    +P  I + + + L  A++P+G+ +WN +
Sbjct: 239 IAAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDV 298

Query: 307 FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK 366
           F+V HPG   ++D +E  L L  +KL  +R+V  EYGNM + +V+F++DE+RK+S  E +
Sbjct: 299 FWVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGR 358

Query: 367 ATTGEGLECGVLFGFGPGLTVETVVLQSVSTN 398
           +TTG+GL+ GVL GFGPGL++ETVVL+S+  +
Sbjct: 359 STTGDGLQWGVLLGFGPGLSIETVVLRSMPLH 390

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387

 Score =  465 bits (1197), Expect = e-164
 Identities = 183/390 (46%), Positives = 252/390 (64%), Gaps = 9/390 (2%)

Query: 13  MTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSI 72
           M   +   G  A +LAIGT+ PPNC  Q + PDFYFRVTNSDH T LK+KFKRIC+   +
Sbjct: 1   MRRSQRADGL-AAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGV 59

Query: 73  KKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT 132
           ++RY H TEE+L  +P     +APSLDAR  +  D VP+L  EAA KAI EWG+P + IT
Sbjct: 60  QRRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT 119

Query: 133 HLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGAR 192
           HL+ +   G  +PG D RL+ LLGL+PSV R M++  GC+ G   +RLAKD+AEN+ GAR
Sbjct: 120 HLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGAR 179

Query: 193 VLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ 252
           VLVV +++ ++ F  P E     L+VQ +FGDGA A I+GAD+D  + E PLF+I+S  Q
Sbjct: 180 VLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADAD--DVERPLFEIVSAAQ 237

Query: 253 TTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI----GISDWNSLFY 308
           T +P++++ ++ +  E      L R VP  IG+ V++CL +   P+    G   WN LF+
Sbjct: 238 TIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFW 297

Query: 309 VVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT 368
            VHPG   ++DQV+  LGL   KL ASR VL +YGNM   +V F LDE+R++   +  A 
Sbjct: 298 AVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQR--KEAAA 355

Query: 369 TGEGLECGVLFGFGPGLTVETVVLQSVSTN 398
            GE  E GV+  FGPG+TV+ ++L + S +
Sbjct: 356 AGEWPELGVMMAFGPGMTVDAMLLHATSHH 385

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393

 Score =  455 bits (1172), Expect = e-160
 Identities = 89/374 (23%), Positives = 171/374 (45%), Gaps = 13/374 (3%)

Query: 22  PTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTE 81
             A I  + T TP     Q+D  D    V         +E+  R+ ++  I  R   +  
Sbjct: 31  TVAVIEGLATGTPRRVVNQSDAADR---VAELFLDPGQRERIPRVYQKSRITTRRMAV-- 85

Query: 82  EILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG 141
           + L    ++   E  ++  R  +  +    L  + + +A+       ++I  L+ +   G
Sbjct: 86  DPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG 145

Query: 142 VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR 201
              PG DV +++ LGL PS++R+++   GC      +  A +    +P  + LVVC ++ 
Sbjct: 146 FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELC 205

Query: 202 VLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENY 261
            ++        ++ +V+ ++FGDG  A +IGA       E     + S     + +TE+ 
Sbjct: 206 SVNA--VFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDG 263

Query: 262 ISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQV 321
           I   +   G  C LS ++P  I + V   ++  +   G+   +   + +HPGG  +++Q 
Sbjct: 264 IVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQS 323

Query: 322 EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGF 381
            ++LG+  E    S  VL  +GNM + S+ F+L+ + +      +A + + +  GV F F
Sbjct: 324 VRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAF 377

Query: 382 GPGLTVETVVLQSV 395
           GPG+TVE ++   +
Sbjct: 378 GPGVTVEGMLFDII 391

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387

 Score =  449 bits (1155), Expect = e-158
 Identities = 233/374 (62%), Positives = 284/374 (75%), Gaps = 1/374 (0%)

Query: 22  PTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTE 81
             AT++AIGT+ PPNC+YQAD+PDFYFRVTNSDH   LK+KFKR+CE   I+KRY H+TE
Sbjct: 11  KLATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTE 70

Query: 82  EILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG 141
           EILKENPN+  YEA SL+ R  M +  V +LGKEAALKAIKEWGQP SKITHLI     G
Sbjct: 71  EILKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG 130

Query: 142 VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR 201
           VDMPGAD +L +LL L PSV R M Y  GCY GGTV+RLAKDIAENN GARVL+VCS++ 
Sbjct: 131 VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMT 190

Query: 202 VLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENY 261
              F  PSETHLD ++ QA+ GDGA A I+GAD D++  E P+F+++S  QT VP++   
Sbjct: 191 TTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLT-VERPIFELVSTAQTIVPESHGA 249

Query: 262 ISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQV 321
           I G L E G   HL + VP  I N +  CLS+A +P+ ISDWNSLF++ HPGG  +LDQV
Sbjct: 250 IEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQV 309

Query: 322 EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGF 381
              +GL KEKL  +R VL++YGNM + +VFFI+DE+RKKS+E  +ATTGEGLE GVLFGF
Sbjct: 310 TAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGF 369

Query: 382 GPGLTVETVVLQSV 395
           GPG+TVETVVL+SV
Sbjct: 370 GPGITVETVVLRSV 383

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413

 Score =  449 bits (1156), Expect = e-157
 Identities = 218/377 (57%), Positives = 274/377 (72%), Gaps = 3/377 (0%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
            G  A+ILAIGT+ PPN   Q+ YPDFYFR+T ++H TELK+KFKRICER +IK+RY +L
Sbjct: 36  DGF-ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYL 94

Query: 80  TEEILKENPNMCCY-EAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSA 138
           TEEILK+NP++C + E PSLDARQAML  EVP+L KEAA KAI+EWGQ  S ITHLIF +
Sbjct: 95  TEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCS 154

Query: 139 FYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCS 198
               D+PGAD  + +LLGL PSV R+ ++  GC+ GGTV+R+AKD+AENN GARVLV+CS
Sbjct: 155 TTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICS 214

Query: 199 DIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDT 258
           +   + F  PSETHLD LV QA+FGDGA A I+GAD  I   E   F+I+   QT VP++
Sbjct: 215 ETTAVTFRGPSETHLDSLVGQALFGDGASALIVGAD-PIPQVEKACFEIVWTAQTVVPNS 273

Query: 259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLL 318
           E  I G+++E+G    L   VP  I   ++ C+  A S   ISDWN LF+VVHPGG  +L
Sbjct: 274 EGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAIL 333

Query: 319 DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVL 378
           D+VE  L L   KL  +R+V+ EYGNM +  V FILD+ RK S++   +TTGEGLE GVL
Sbjct: 334 DRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVL 393

Query: 379 FGFGPGLTVETVVLQSV 395
           FGFGPGLT+ETVVL+SV
Sbjct: 394 FGFGPGLTIETVVLKSV 410

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382

 Score =  444 bits (1145), Expect = e-156
 Identities = 82/374 (21%), Positives = 138/374 (36%), Gaps = 26/374 (6%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
            G  AT+     S P +     +  +   R      +        R+ E   ++ R+   
Sbjct: 6   SGFMATLCRPSVSVPEHVITMEETLELARRRHTDHPQLP---LALRLIENTGVRTRHIVQ 62

Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
             E   E+P          + R  +   E          +A+ +     + I  +I+ + 
Sbjct: 63  PIEDTLEHP--------GFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSC 114

Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            G  MP     L+  +G   +  ++ I   GC  GG  I  A D     P A  L+V  +
Sbjct: 115 TGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACE 174

Query: 200 IRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTE 259
              L +  P++  +  L+   +FGDG  AA++              ++       +P TE
Sbjct: 175 FCSLCYQ-PTDLGVGSLLCNGLFGDGIAAAVVRGR------GGTGVRLERNGSYLIPKTE 227

Query: 260 NYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLD 319
           ++I   +K  G +  L + VP  +   +   L       G    +  FY+VH GG  +LD
Sbjct: 228 DWIMYDVKATGFHFLLDKRVPATMEP-LAPALKELAGEHGWDASDLDFYIVHAGGPRILD 286

Query: 320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLF 379
            +   L +       SR  L EYGN+ +  V   L  +  +         G     G+L 
Sbjct: 287 DLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEG----GVEEG---ARGLLA 339

Query: 380 GFGPGLTVETVVLQ 393
           GFGPG+T E  +  
Sbjct: 340 GFGPGITAEMSLGC 353

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374

 Score =  424 bits (1091), Expect = e-148
 Identities = 104/383 (27%), Positives = 176/383 (45%), Gaps = 23/383 (6%)

Query: 18  SNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYF 77
            +    + +L IG S P     Q    D          K E  EK KRI E+  IK R  
Sbjct: 9   KSNNN-SFVLGIGISVPGEPISQQSLKDSISNDF--SDKAETNEKVKRIFEQSQIKTR-- 63

Query: 78  HLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFS 137
           HL  +  K   ++      ++          VP L ++A L+A+K+WG     ITH++  
Sbjct: 64  HLVRDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSV 123

Query: 138 AFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVC 197
              G+ +P  + +L+ LLGL   V R+ +   GC  G + +R A  +A+ +P  R+LVVC
Sbjct: 124 TSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVC 183

Query: 198 SDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPD 257
           +++  L F        D +V  ++F DG+ A IIG +      E+PL++++     + P+
Sbjct: 184 TEVCSLHFSNTD--GGDQMVASSIFADGSAAYIIGCNP--RIEETPLYEVMCSINRSFPN 239

Query: 258 TENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNS-----LFYVVHP 312
           TEN +   L++ G    L   +P+ IG+ ++  +   +    +    +       +++H 
Sbjct: 240 TENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLIHT 299

Query: 313 GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEG 372
           GG  +L  +E +LG+  ++   +  V   YGNM + SV F++D  RK             
Sbjct: 300 GGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKS---------KSL 350

Query: 373 LECGVLFGFGPGLTVETVVLQSV 395
               +   FGPGL  E   L++V
Sbjct: 351 PTYSISLAFGPGLAFEGCFLKNV 373

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465

 Score =  396 bits (1017), Expect = e-136
 Identities = 83/398 (20%), Positives = 156/398 (39%), Gaps = 21/398 (5%)

Query: 13  MTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSI 72
           M           +I  +G   PP                    ++   +K   I     I
Sbjct: 21  MAASTVAGELGLSITGLGVQYPPYSLGPDAIDIL---SKRYHPESPAMKKVLAINRYTGI 77

Query: 73  KKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT 132
            +R      +    +P +     P++     + + +   L  EA+ KA+ E     ++IT
Sbjct: 78  DQRSSIGNPD----HPLVNKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQIT 133

Query: 133 HLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA----ENN 188
           H++ +       PG D  + + LGL   + +++++  GC  G   +R A ++        
Sbjct: 134 HMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARG 193

Query: 189 PGARVLVVCSDIRVLDFHEPSET---HLDVLVVQAVFGDGAGAAIIGADSDISNHESPLF 245
             AR+LV+  ++         E+     +  +  A+F D A A I+      +  +  ++
Sbjct: 194 KPARILVLALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIY 253

Query: 246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS------PIG 299
            +L      +PD+E+ +   +  MG    LS  VPV     +    ++ +S      P  
Sbjct: 254 DLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSS 313

Query: 300 ISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK 359
                   + +HPGG  +L   E  +GL  E + AS      +GN  + ++F +L+ +R+
Sbjct: 314 YQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLRE 373

Query: 360 KSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST 397
           K   +  A  G+  E  V   FGPG+ VE  +L+    
Sbjct: 374 KD-MDALAPGGKVKEYVVGCAFGPGINVEMCMLKRRMN 410

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413

 Score =  386 bits (992), Expect = e-133
 Identities = 82/408 (20%), Positives = 139/408 (34%), Gaps = 48/408 (11%)

Query: 17  KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRY 76
           +SN    A + A       +     +  +   R  +         +   I     I+ R 
Sbjct: 21  QSNAMA-AYLCAPAVIHGEHSVETREIVEE-VRGRHPHAP--WAPRIDGIAASTGIESRG 76

Query: 77  FHLTEEILKENPNMCCY----------------------------EAPSLDARQAMLIDE 108
           + L  E                                        + ++  R A   + 
Sbjct: 77  WMLPLEAAVAPGGGGDLGAAREALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEA 136

Query: 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT 168
           V   G+ AA  A++  G  V+ +  LI S      +PG DV L   L L+     L    
Sbjct: 137 VQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPATQ 196

Query: 169 QGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGA 228
             C  G   + LA D+   +P   VLVV S+     +  P++  L+ L+V+ +F D A A
Sbjct: 197 WACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQ-PADDTLESLIVRLLFADTAVA 255

Query: 229 AIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVD 288
           A++            + ++ +    T+P T +    + +  GT+  + R  P A+   V 
Sbjct: 256 AVVTGRPR----PESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVT 311

Query: 289 KCLSN--AMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGL-RKEKLWASRYVLREYGNM 345
                         S W+    + HPGG  +L+ +E+T+       L +        GN 
Sbjct: 312 AMWEWLRVRYEDDPSSWHPDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNR 371

Query: 346 GAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
           G  +VF IL        +             VL+   PGLT   +  +
Sbjct: 372 GGAAVFDILRRAHDAGQKTG--------SRAVLYAAAPGLTATALEGE 411

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396

 Score = 73.7 bits (181), Expect = 1e-14
 Identities = 57/300 (19%), Positives = 95/300 (31%), Gaps = 64/300 (21%)

Query: 112 LGKEAALKAIKEWGQPVSKITHLIF---SAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT 168
           +G  AA   I +      KI  +I    SA        A V++  LLG++P   R     
Sbjct: 54  MGANAAKDIITDED--KKKIGMVIVATESAVDAA--KAAAVQIHNLLGIQPFA-RCFEMK 108

Query: 169 QGCYMGGTV-IRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAG 227
           + CY   T  I+LAKD     P  +VLV+ +D      +   E            G GA 
Sbjct: 109 EACY-AATPAIQLAKDYLATRPNEKVLVIATDTARYGLNSGGE---------PTQGAGAV 158

Query: 228 AAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYV 287
           A +I  +            IL+  +  V  TE+           +       P+  G   
Sbjct: 159 AMVIAHNPS----------ILALNEDAVAYTEDV-------YDFWRPTGHKYPLVDGALS 201

Query: 288 DKCLSNAMSPI----------GISDWNSLFYVVHPGGDGLLDQVEKTLGLR--------- 328
                 +               ++D+       H     +  +  +++            
Sbjct: 202 KDAYIRSFQQSWNEYAKRQGKSLADFA--SLCFHVPFTKMGKKALESIIDNADETTQERL 259

Query: 329 KEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVE 388
           +     +    R  GN+   S++  L  +    +E      GE +    LF +G G   E
Sbjct: 260 RSGYEDAVDYNRYVGNIYTGSLYLSLISL----LENRDLQAGETI---GLFSYGSGSVGE 312

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 54/297 (18%), Positives = 98/297 (32%), Gaps = 57/297 (19%)

Query: 112 LGKEAALKAIKEWGQPVSKITHLIF---SAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT 168
               AA   + +       I  +I    S+        A V L RL+G++P   R     
Sbjct: 59  FAANAAEAILTKED--KEAIDMVIVGTESSIDES--KAAAVVLHRLMGIQPFA-RSFEIK 113

Query: 169 QGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGA 228
           +  Y     ++LAK+    +P  +VLVV +DI     +   E            G GA A
Sbjct: 114 EAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYGLNSGGE---------PTQGAGAVA 164

Query: 229 AIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVD 288
            ++ ++  I          L+  +  V  T++           Y       P+  G   +
Sbjct: 165 MLVSSEPRI----------LALKEDNVMLTQDIYDFWRPTGHPY-------PMVDGPLSN 207

Query: 289 KCLSNAMS----------PIGISDWNSLFY-------VVHPGGDGLLDQVEKTLGLRKEK 331
           +    + +           +  +D+++L +               + DQ E        +
Sbjct: 208 ETYIQSFAQVWDEHKKRTGLDFADYDALAFHIPYTKMGKKALLAKISDQTEAEQERILAR 267

Query: 332 LWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVE 388
              S    R  GN+   S++  L  + + +      T G  +    LF +G G   E
Sbjct: 268 YEESIIYSRRVGNLYTGSLYLGLISLLENATTL---TAGNQI---GLFSYGSGAVAE 318

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357

 Score = 65.7 bits (161), Expect = 5e-12
 Identities = 52/318 (16%), Positives = 103/318 (32%), Gaps = 67/318 (21%)

Query: 109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFY--GVDMPGADVRLMRLLGLKPS----VN 162
            P++   AA  A+       + ++ ++ S+ +  G+D+  A   +      +      + 
Sbjct: 54  PPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVPAFGLA 113

Query: 163 RLMIYTQGC--YMGGTVIRLAKDIAENNPGAR---VLVVCSDI--RVLDFHEPSETHLDV 215
                 Q C   MG   I LA     +  GA    +L          +D     +  +  
Sbjct: 114 ------QRCNGGMGA--IELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNSVDVTM-- 163

Query: 216 LVVQAVFGDGAGAAIIGADSD----ISNH---ESPLFQILSCTQTTVP--------DTEN 260
                 +GDGA A ++         +S     ++ L  +    +   P            
Sbjct: 164 ------YGDGAAALVLSTRDGFARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLG 217

Query: 261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS----DWNSLFYVVHPGGDG 316
             + +  E+     L+      +     + L +A    G +           V+     G
Sbjct: 218 TRTVRGAELADLPDLTHRYIDLLVAAKTQALEDA----GTAIEDIAH----AVIPVSRRG 269

Query: 317 LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE-VRKKSIEEMKATTGEGLEC 375
              ++   LGL  E+   +    R  G++GA   +  L   V    ++      G+ +  
Sbjct: 270 TGHELHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVENALVQP-----GDRV-- 320

Query: 376 GVLFGFGPGLTVETVVLQ 393
            +LFG G G T    V++
Sbjct: 321 -LLFGGGAGYTCTAAVVE 337

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345

 Score = 52.6 bits (127), Expect = 8e-08
 Identities = 32/208 (15%), Positives = 64/208 (30%), Gaps = 34/208 (16%)

Query: 192 RVLVVCSDI--RVLDFHEPSETHLDVLVVQ------AV-FGDGAGAAIIGAD---SDISN 239
             LVV  +    V +      T  DV   +      A+  G GA A ++       D   
Sbjct: 151 YALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPDAPR 210

Query: 240 HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIG 299
           ++  + +  +          + +    + +       +                  +   
Sbjct: 211 YKGGVTRSATEWNKLCRGNLDRMVTDTRLL--LIEGIKLAQKTFVAAKQV---LGWAVEE 265

Query: 300 ISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE-VR 358
           + D     +V+H           K+ G+   K+        E+GN+G  SV  +L +   
Sbjct: 266 L-DQ----FVIHQVSRPHTAAFVKSFGIDPAKVMTI---FGEHGNIGPASVPIVLSKLKE 317

Query: 359 KKSIEEMKATTGEGLECGVLFGFGPGLT 386
              +++     G+ +    L G G GL 
Sbjct: 318 LGRLKK-----GDRI---ALLGIGSGLN 337

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 6e-07
 Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 59/227 (25%)

Query: 150 RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRL-----AKDIAENNPGARVLVVCSDIRVLD 204
            L RLL  KP  N L++             L     AK     N   ++L+     +V D
Sbjct: 233 ELRRLLKSKPYENCLLV-------------LLNVQNAKAWNAFNLSCKILLTTRFKQVTD 279

Query: 205 F-HEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYIS 263
           F    + TH+ +             +++    D    + P  ++L+      P   + I+
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-EVLTTN----PRRLSIIA 334

Query: 264 GQLKEM----GTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFY--VVHPGGDGL 317
             +++       + H++ D    +   ++  L N + P   +++  +F    V P     
Sbjct: 335 ESIRDGLATWDNWKHVNCD---KLTTIIESSL-NVLEP---AEYRKMFDRLSVFP----- 382

Query: 318 LDQV---EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKS 361
                     L L    +W          ++    V  +++++ K S
Sbjct: 383 -PSAHIPTILLSL----IW---------FDVIKSDVMVVVNKLHKYS 415

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 55/394 (13%), Positives = 102/394 (25%), Gaps = 157/394 (39%)

Query: 36  NCFYQADYP---------DFYFRVTNSDHKTE-----LKEKFKRICER---QSIKKRYFH 78
           +C    D P         D      ++   T      L  K + + ++   + ++  Y  
Sbjct: 34  DCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF 93

Query: 79  LTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSA 138
           L   I  E         PS+  R  M I++  +L  +          Q  +K        
Sbjct: 94  LMSPIKTE------QRQPSMMTR--MYIEQRDRLYND---------NQVFAK-------- 128

Query: 139 FYGVDMPGADVRLMR-LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVC 197
            Y V      ++L + LL L+P+ N ++I   G  + G+             G   +   
Sbjct: 129 -YNVSRLQPYLKLRQALLELRPAKN-VLID--G--VLGS-------------GKTWVA-- 167

Query: 198 SDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPD 257
             + V   ++          VQ                        +F            
Sbjct: 168 --LDVCLSYK----------VQCKMDFK------------------IF------------ 185

Query: 258 TENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGL 317
              +++     +   C+    V                    +     L Y + P     
Sbjct: 186 ---WLN-----LK-NCNSPETV--------------------LEMLQKLLYQIDPNWTSR 216

Query: 318 LDQVEKT-LGLRKEKLWASRYVL-REYGNMGAPSVFFILDEVR-KKSIEEMKATTGEGLE 374
            D      L +   +    R +  + Y      +   +L  V+  K+           L 
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPY-----ENCLLVLLNVQNAKAWNAF------NLS 265

Query: 375 CGVL--------FGFGPGLTVETVVLQSVSTNFT 400
           C +L          F    T   + L   S   T
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLT 299

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 46.1 bits (108), Expect = 3e-06
 Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 26/56 (46%)

Query: 68  ERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKE 123
           E+Q++KK    L +  LK       Y A           D  P L    A+KA  E
Sbjct: 18  EKQALKK----L-QASLK------LY-AD----------DSAPAL----AIKATME 47

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 50/249 (20%), Positives = 82/249 (32%), Gaps = 51/249 (20%)

Query: 24  ATILAIGTSTPPN-------CFYQADYPDFYFRVTNSDHKTELKEKFKR-----ICERQS 71
           A I A G  TPP+             Y   +     +  +    E  +      I +   
Sbjct: 25  AVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASG 84

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK RY      + K          P +  R    +  + ++   AA +AI+ WG+P  +I
Sbjct: 85  IKSRYV-----VAKPGIVDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERI 139

Query: 132 THLIFSAFYGVDM--PGADVRLMRLLGLKP-----SVNRLMIYTQGCYMGGTV--IRLAK 182
             ++ +         P   + +   LGL       +V         C        ++ A 
Sbjct: 140 GAVLCACSNM-QRAYPAMAIEVQNALGLGGFAFDMNV--------AC--SSATFGLKTAA 188

Query: 183 DIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNH 240
           D         VL+V  +I    L+F +   +H   +     FGD A AAI+    D    
Sbjct: 189 DFVGGGSVDAVLMVNPEICSGHLNFRDRD-SH--FI-----FGDVATAAIVERADD---- 236

Query: 241 ESPLFQILS 249
               + IL 
Sbjct: 237 AQGGWSILG 245

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333

 Score = 43.3 bits (103), Expect = 8e-05
 Identities = 78/393 (19%), Positives = 128/393 (32%), Gaps = 109/393 (27%)

Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKR-----ICERQSIKKRYFH 78
           + +L  G+  PPN            RVTN D    L E+        I  R  I  RY  
Sbjct: 12  SRVLGTGSYLPPN------------RVTNQDLAKRLAEQGIETSDEWIVARTGIHARY-- 57

Query: 79  LTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIF-- 136
                 + +         S              L   A+ +AI+        I  +I   
Sbjct: 58  ----FAEPD------VTTS-------------DLAFIASQRAIEAADIDPQSIDLIIVAT 94

Query: 137 -SAFYGVDM--PGADVRLMRLLGLKPSVNRLMIY--TQGCYMGGTV--IRLAKDIAENNP 189
            +     D   P     L   LG++   N    +     C   G    +  A     +  
Sbjct: 95  STP----DFVFPSTACLLQNKLGIR---NHGAAFDVQAVC--SGFAYAVATADSFIRSGQ 145

Query: 190 GARVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGADSD---ISNH 240
               LV+ ++   R+LDF        D    VL     FGDGAGA I+ A  +   +++ 
Sbjct: 146 HRTALVIGAETFSRILDFK-------DRTTCVL-----FGDGAGAVILQASDEPGVLASA 193

Query: 241 ------ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNA 294
                  S +          V     ++    +    +      +       ++K     
Sbjct: 194 LHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQA--VFKLAVNVLEKVAVEALEK---AN 248

Query: 295 MSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFIL 354
           +S   I DW     + H     ++    + LGL +E++  +   + E+GN  A S+   L
Sbjct: 249 LSAEQI-DW----LIPHQANIRIMQSTCRKLGLPQERMIVT---VGEHGNTSAASIPLAL 300

Query: 355 DE-VRKKSIEEMKATTGEGLECGVLFGFGPGLT 386
           D  VR   I+      G+ +   ++ G G G T
Sbjct: 301 DVAVRDGRIKR-----GQNV---LIEGVGGGFT 325

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317

 Score = 42.8 bits (102), Expect = 9e-05
 Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 48/210 (22%)

Query: 192 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGADSD---ISNH-- 240
             LVV SD+  R  D         D    ++     FGDGAGAA++ A  +   IS H  
Sbjct: 133 YALVVGSDVLARTCDPT-------DRGTIII-----FGDGAGAAVLAASEEPGIISTHLH 180

Query: 241 -ESPLFQILSC--TQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSP 297
            +    ++L+        P+   +++    E   +     ++   +   +     N +  
Sbjct: 181 ADGSYGELLTLPNADRVNPENSIHLTMAGNE--VFKVAVTELAHIVDETLAA---NNLDR 235

Query: 298 IGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE- 356
             + DW     V H     ++    K LG+  + +  +   L  +GN  A SV   LDE 
Sbjct: 236 SQL-DW----LVPHQANLRIISATAKKLGMSMDNVVVT---LDRHGNTSAASVPCALDEA 287

Query: 357 VRKKSIEEMKATTGEGLECGVLFGFGPGLT 386
           VR   I+      G+ +   +L  FG G T
Sbjct: 288 VRDGRIKP-----GQLV---LLEAFGGGFT 309

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321

 Score = 41.3 bits (98), Expect = 3e-04
 Identities = 45/226 (19%), Positives = 85/226 (37%), Gaps = 63/226 (27%)

Query: 192 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGADSD---ISNH-- 240
             LV+  +   ++LD+        D    VL     FGDGA   +I A      ++    
Sbjct: 134 TGLVIGGETFSKMLDWT-------DRSTAVL-----FGDGAAGVLIEAAETPHFLNEKLQ 181

Query: 241 ---------ESPLFQILSCTQTTVPDTENYISGQLKEM-GTYCHLSRDV-PVAIGNYVDK 289
                     S      S            +     +M G      R +   AI + V +
Sbjct: 182 ADGQRWTALTSGYTINESPFYQGHKQASKTL-----QMEG------RSIFDFAIKD-VSQ 229

Query: 290 CLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPS 349
            + + ++   + D+     ++H     ++D++ +   + +EK   +   + +YGN  A S
Sbjct: 230 NILSLVTDETV-DY----LLLHQANVRIIDKIARKTKISREKFLTN---MDKYGNTSAAS 281

Query: 350 VFFILDE-VRKKSIEEMKATTGEGLECGVLF-GFGPGLTVETVVLQ 393
           +  +LDE V   ++         G +  V+  GFG GLT  +++L 
Sbjct: 282 IPILLDEAVENGTLI-------LGSQQRVVLTGFGGGLTWGSLLLT 320

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354

 Score = 40.6 bits (96), Expect = 6e-04
 Identities = 37/221 (16%), Positives = 69/221 (31%), Gaps = 60/221 (27%)

Query: 192 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAD----------- 234
           RVL+   D   +++D         D    +L     FGD      +              
Sbjct: 149 RVLLAVGDTISKMIDPT-------DRSTSLL-----FGDAGTMTALETSNGDAAAHFIIG 196

Query: 235 SDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLS---RDV-PVAIGNYVDKC 290
           +D           L          +     ++    +   L     ++    +   V K 
Sbjct: 197 ADGKGAR-----NLIVPSGGFKPYDAAADERMAG-KSPECLFMDGGEIFNFTLNA-VPKL 249

Query: 291 LSNAMSPIGIS----DWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMG 346
           +S  +   G      D     ++ H     +L  + K  GL  E++  +   + EYGN  
Sbjct: 250 VSRTLDIAGRDKDSYDA----FLFHQANLFMLKHLAKKAGLPAERVPVN---IGEYGNTS 302

Query: 347 APSVFFILDE-VRKKSIEEMKATTGEGLECGVLFGFGPGLT 386
             S+  ++   ++ +  EE        L    +FGFG G +
Sbjct: 303 CASIPLLITTELKDRLKEE-----TLQL---GMFGFGVGYS 335

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323

 Score = 40.2 bits (95), Expect = 7e-04
 Identities = 53/209 (25%), Positives = 78/209 (37%), Gaps = 47/209 (22%)

Query: 192 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGADSD---ISNH-- 240
           + LV+ SD+  R LD         D    VL     FGDGAGA I+ A      IS H  
Sbjct: 140 KALVIGSDLNSRKLDET-------DRSTVVL-----FGDGAGAVILEASEQEGIISTHLH 187

Query: 241 -ESPLFQILSC-TQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI 298
             +     L         +   YI  Q  E  T+    R++   +   +     N +   
Sbjct: 188 ASADKNNALVLAQPERGIEKSGYIEMQGNE--TFKLAVRELSNVVEETLLA---NNLDKK 242

Query: 299 GISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDE-V 357
            + DW     V H     ++    K L +   ++  +   L +Y N  A +V   LDE +
Sbjct: 243 DL-DW----LVPHQANLRIITATAKKLEMDMSQVVVT---LDKYANNSAATVPVALDEAI 294

Query: 358 RKKSIEEMKATTGEGLECGVLFGFGPGLT 386
           R   I+      G+ L   +L  FG G T
Sbjct: 295 RDGRIQR-----GQLL---LLEAFGGGWT 315

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	402
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	100.0
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	100.0
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	100.0
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	100.0
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	100.0
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	100.0
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	100.0
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	100.0
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	100.0
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	100.0
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	100.0
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	100.0
3v7i_A	413	Putative polyketide synthase; type III polyketide	100.0
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	100.0
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	100.0
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	100.0
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	100.0
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	100.0
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	100.0
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	100.0
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	100.0
1u0m_A	382	Putative polyketide synthase; type III polyketide	100.0
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	100.0
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	100.0
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	100.0
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	100.0
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	100.0
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	100.0
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	100.0
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	100.0
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	100.0
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	100.0
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	100.0
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	100.0
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	100.0
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	100.0
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	100.0
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	100.0
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	100.0
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	100.0
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	99.95
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.87
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.86
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.86
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	99.85
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	99.85
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	99.84
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	99.83
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	99.82
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.82
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	99.82
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	99.81
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	99.81
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.8
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	99.8
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	99.79
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	99.79
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	99.79
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.78
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.77
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.77
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.77
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	99.75
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	99.75
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.75
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	99.74
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	99.74
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	99.73
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.73
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.73
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.73
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	99.68
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	99.67
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	99.63
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.42
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.41
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.06
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.78
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.76
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.73
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	93.62
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	93.43
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	93.38
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	92.97
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	92.96
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	92.9
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	92.81
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	92.67
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	92.66
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	92.61
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	92.46
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	92.43
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	92.37
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	91.94
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	91.23
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	88.58
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	88.24
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	87.79
1u0m_A	382	Putative polyketide synthase; type III polyketide	86.6
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	86.57
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	84.89
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	84.16
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	83.58
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	83.22
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	82.31
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	81.75
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	81.15

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=100.00  E-value=2.1e-67  Score=521.95  Aligned_cols=382  Identities=52%  Similarity=0.927  Sum_probs=340.7

Q ss_pred             cccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCC
Q 044410           15 TVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYE   94 (402)
Q Consensus        15 ~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~   94 (402)
                      ..|+.+++ ++|.|+|+|+|+++++|+|+.+.++.+.+++++++++++.++|++++||++||++.+++.+..+|+++.++
T Consensus         9 ~~~~~~~~-~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~   87 (393)
T 3ov2_A            9 REQRAQGP-ATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKERPKLCSYK   87 (393)
T ss_dssp             HHHSCSSC-CEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSSS
T ss_pred             cccCCCCC-eEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeecChhhhccCcccccCC
Confidence            34556678 99999999999999999999998766665555556777888999999999999999988788888888999


Q ss_pred             CCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchH
Q 044410           95 APSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMG  174 (402)
Q Consensus        95 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~  174 (402)
                      .|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+.+||+++.+.++++++++|+|+
T Consensus        88 ~p~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~  167 (393)
T 3ov2_A           88 EASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMG  167 (393)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEcCccHHH
Confidence            99999999999999999999999999999999999999999999999888999999999999998753468999999999


Q ss_pred             HHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeee
Q 044410          175 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTT  254 (402)
Q Consensus       175 ~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~  254 (402)
                      +.||.+|.++|++|+.++||||++|++|..+.+|.|.+.+++.+..+|||||+|+||++++. .++..+.+++...++..
T Consensus       168 ~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~-~~~~~~~~~~~~~~~~~  246 (393)
T 3ov2_A          168 AAMLRIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPL-EGIEKPIYEIAAAMQET  246 (393)
T ss_dssp             HHHHHHHHHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC-TTTCCCSEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCC-CcccCceeEEEecCcEE
Confidence            99999999999999999999999999986677777655566678999999999999998765 33333457888777788


Q ss_pred             cCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcceEEEEcCCCHHHHHHHHHHcCCCccccHH
Q 044410          255 VPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWA  334 (402)
Q Consensus       255 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~H~~~~~~~~~~~~~lgi~~ek~~~  334 (402)
                      +|.+.+.+.|.++..|+.+.+++++|+++.+.++++++++|+++|++.++|++|++||+|.+|++.++++||++++|++.
T Consensus       247 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~v~Hq~n~~i~~~v~~~Lgl~~ek~~~  326 (393)
T 3ov2_A          247 VAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFWVAHPGNWAIIDAIEAKLQLSPDKLST  326 (393)
T ss_dssp             CTTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGSEEEECCCCHHHHHHHHHHHTCCTTTTHH
T ss_pred             ecCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCcEEEECCCChHHHHHHHHHcCCCHHHHHH
Confidence            89988888888888888888899999999999999999999999999536669999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccC
Q 044410          335 SRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTN  398 (402)
Q Consensus       335 ~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~  398 (402)
                      +|+++++||||+|||+|++|++++++..++|++++|.+.|+|++++||+|++|++++|||.+++
T Consensus       327 s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~~  390 (393)
T 3ov2_A          327 ARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMPLH  390 (393)
T ss_dssp             HHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBCC
T ss_pred             HHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEcccc
Confidence            9999999999999999999999997644458898885558999999999999999999997663

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=100.00  E-value=1.5e-65  Score=507.56  Aligned_cols=376  Identities=48%  Similarity=0.853  Sum_probs=328.0

Q ss_pred             cccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCcc
Q 044410           13 MTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCC   92 (402)
Q Consensus        13 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~   92 (402)
                      |.+.|+.+++ ++|.|+|+|+|+++++|+|+.+.++..+++++..+++++.+||++++||++||++.+++.++++|+++.
T Consensus         1 ~~~~~~~~~~-~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~   79 (387)
T 3oit_A            1 MRRSQRADGL-AAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVD   79 (387)
T ss_dssp             CCCCCCCSSC-CEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESCCHHHHHHCGGGTC
T ss_pred             CCcccCCCCC-eEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeecCHHHhccCccccc
Confidence            4456777788 999999999999999999999988666655555567778889999999999999999888888898889


Q ss_pred             CCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccc
Q 044410           93 YEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCY  172 (402)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~  172 (402)
                      ++.|++++|++.|.++..+|+++|+++||+++|++++|||+||++|++++..|+++.+|+.+||+++.+.++++++++|+
T Consensus        80 ~~~p~~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~  159 (387)
T 3oit_A           80 RDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCF  159 (387)
T ss_dssp             TTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEECCGGG
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEECchhH
Confidence            99999999999999999999999999999999999999999999999998789999999999999986534789999999


Q ss_pred             hHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee
Q 044410          173 MGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ  252 (402)
Q Consensus       173 ~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~  252 (402)
                      |++.||.+|.++|++|+.++||||++|.+|..|.+|.|.+.+++.+..+|||||+|+||++++.  +...+.+++.+.++
T Consensus       160 ~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~--~~~~~~~~~~~~~~  237 (387)
T 3oit_A          160 AGCAALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADAD--DVERPLFEIVSAAQ  237 (387)
T ss_dssp             HHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCC--SSCCCCEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCC--cccCCceEEEeccc
Confidence            9999999999999999999999999999986677777655566778999999999999998763  22234578888888


Q ss_pred             eecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccC----CCCCCcceEEEEcCCCHHHHHHHHHHcCCC
Q 044410          253 TTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPI----GISDWNSLFYVVHPGGDGLLDQVEKTLGLR  328 (402)
Q Consensus       253 ~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~----gl~~~~di~~i~H~~~~~~~~~~~~~lgi~  328 (402)
                      ..+|.+++.+.|.+.++|+.+.+++++|+++.+.++++++++|+++    |++.+++++|++||+|.+|++.++++||++
T Consensus       238 ~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~d~d~~~~v~Hq~n~~il~~v~~~Lgl~  317 (387)
T 3oit_A          238 TIIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMDQVDAALGLE  317 (387)
T ss_dssp             EECTTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC------GGGSEEEECCCCHHHHHHHHHHHTCC
T ss_pred             EEeCCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccEEEECCCCHHHHHHHHHHcCCC
Confidence            8889998888888888888888899999999999999999999999    987326679999999999999999999999


Q ss_pred             ccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCC---CCceEEEEEEcccccceeeEEeeec
Q 044410          329 KEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGE---GLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       329 ~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~---~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      ++|+..+|+++++||||+|||+|++|++++++     ++++|.   ++|++++++||+|++|++++||+..
T Consensus       318 ~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~-----~~~~G~~g~~~d~vll~~fG~G~t~~~~ll~~~~  383 (387)
T 3oit_A          318 PGKLAASRRVLSDYGNMSGATVIFALDELRRQ-----RKEAAAAGEWPELGVMMAFGPGMTVDAMLLHATS  383 (387)
T ss_dssp             TTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHC---------------CCEEEEEEEETTTEEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHhCchHHhHHHHHHHHHHHh-----hhccCCCCCCCCEEEEEEecccceeeeeeeEecc
Confidence            99999989999999999999999999998764     355541   2379999999999999999999853

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=100.00  E-value=9e-60  Score=470.48  Aligned_cols=372  Identities=57%  Similarity=0.953  Sum_probs=317.8

Q ss_pred             cCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCC-
Q 044410           17 KSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEA-   95 (402)
Q Consensus        17 ~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~-   95 (402)
                      ++..++ ++|.++|+|+|+++++|+++.+.+....+.++.+++.++.+||++++||++||++.+++.+..+|++..+.. 
T Consensus        33 ~~~~~~-~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~  111 (413)
T 1xes_A           33 QRADGF-ASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEV  111 (413)
T ss_dssp             HSCCSC-EEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSSSS
T ss_pred             ccCCCC-eEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccccccccC
Confidence            455567 999999999999999999999887543333333455556789999999999999988766666666666666 


Q ss_pred             CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHH
Q 044410           96 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGG  175 (402)
Q Consensus        96 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~  175 (402)
                      |++++|++.|.+...+|+.+|+++||+++|++++|||+||+++++++..|+++.+|+.+||+++.+.++++++++|+|++
T Consensus       112 ~~~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~  191 (413)
T 1xes_A          112 PSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGG  191 (413)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHH
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceecCccHHHH
Confidence            89999999999999999999999999999999999999999999887789999999999999875322789999999999


Q ss_pred             HHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeec
Q 044410          176 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTV  255 (402)
Q Consensus       176 ~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~  255 (402)
                      .||.+|.++|++|..++||||++|.+|..|.+|.+.+++++...++|||||+|+||++.+. .++....+++.+.+...+
T Consensus       192 ~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~-~~~~~~~~~l~~~~~~~~  270 (413)
T 1xes_A          192 TVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPI-PQVEKACFEIVWTAQTVV  270 (413)
T ss_dssp             HHHHHHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC-TTTSCCSEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCC-ccccCCceEEEeeeeEEc
Confidence            9999999999999999999999999987566665544555667899999999999998765 333233467877777778


Q ss_pred             CCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcceEEEEcCCCHHHHHHHHHHcCCCccccHHH
Q 044410          256 PDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWAS  335 (402)
Q Consensus       256 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~H~~~~~~~~~~~~~lgi~~ek~~~~  335 (402)
                      |.+++.+.|.+.+.++.+.+++++|+++.+.++++++++|+++|++.+++++|++||+|.++++.++++||+++||+..+
T Consensus       271 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s  350 (413)
T 1xes_A          271 PNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPT  350 (413)
T ss_dssp             TTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHTTCCTTTTHHH
T ss_pred             CCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccceeEEECCCCHHHHHHHHHHcCCChHHhHHH
Confidence            88877677776666777788999999999999999999999999982277899999999999999999999999999987


Q ss_pred             HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCC-----CCCceEEEEEEcccccceeeEEeee
Q 044410          336 RYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTG-----EGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       336 ~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G-----~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      |+++++||||+|||+|++|++++++    |+ ++|     ++.|+||+++||+|++|++++|||.
T Consensus       351 ~~~l~~~GNtssAsi~~~L~~~~~~----g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~  410 (413)
T 1xes_A          351 RHVMSEYGNMSSACVHFILDQTRKA----SL-QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSV  410 (413)
T ss_dssp             HHHHHHHCBCGGGHHHHHHHHHHHH----HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEEC
T ss_pred             HHHHHhcCcCchhhHHHHHHHHHHh----cc-ccCCCCCCCCcceEEEEEecCCcEEeEEEEEec
Confidence            7889999999999999999999987    54 444     3338999999999999999999998

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=100.00  E-value=2.5e-59  Score=464.14  Aligned_cols=366  Identities=62%  Similarity=1.034  Sum_probs=314.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+++.+.+....++++.+++.++.+||.+++||++||++.+++.+..+|.+.+...|++++|++
T Consensus        13 ~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~r~~   92 (387)
T 3a5r_A           13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSLNVRHK   92 (387)
T ss_dssp             EEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECSCCHHHHHHCHHHHSSSSSCHHHHHH
T ss_pred             cEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEecChhhhccCcccccccCCCHHHHHH
Confidence            89999999999999999999988643333333344555678999999999999998876665666666677889999999


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKD  183 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~  183 (402)
                      .+.++..+|+.+|+++||+++|++++|||+||+++++++..|+.+.+|+.+||+++.+.++++++++|+|++.||.+|.+
T Consensus        93 ~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~  172 (387)
T 3a5r_A           93 MQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKD  172 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999988778999999999999987642268899999999999999999


Q ss_pred             HHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCccccc
Q 044410          184 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYIS  263 (402)
Q Consensus       184 ~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  263 (402)
                      +|++|..++||||++|.+|..+.+|.+.+++++....+|||||+|+||++.+. .++..+.+++.+.+...+|.+.+.+.
T Consensus       173 ~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~~  251 (387)
T 3a5r_A          173 IAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPD-LTVERPIFELVSTAQTIVPESHGAIE  251 (387)
T ss_dssp             HHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCC-TTTCCCCEEEEEEEEEECTTCTTSEE
T ss_pred             HHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCC-ccccCCceEEEeeeEEEeCCChHhcC
Confidence            99999999999999999987566676544445567889999999999998765 33333347787777777888877677


Q ss_pred             ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCC-CCcceEEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhc
Q 044410          264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGIS-DWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREY  342 (402)
Q Consensus       264 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~-~~~di~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~  342 (402)
                      |.+...+..+.+++++|+++.+.++++++++|+++|++ . ++++|++||+|.++++.++++||++++|++.+|+++++|
T Consensus       252 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~-~di~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~~  330 (387)
T 3a5r_A          252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDW-NSLFWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVLKDY  330 (387)
T ss_dssp             EEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCG-GGSEEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHHH
T ss_pred             ceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCCh-hheeEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHhc
Confidence            77666677777899999999999999999999999998 5 778999999999999999999999999999877789999


Q ss_pred             CCCCcchHHHHHHHHHHhhhhhhcccCC-----CCCceEEEEEEcccccceeeEEeeec
Q 044410          343 GNMGAPSVFFILDEVRKKSIEEMKATTG-----EGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       343 Gn~~sasi~i~L~~~~~~~~~~g~i~~G-----~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      |||++||+|++|++++++    |+ ++|     ++.|+|++++||+|++|++++|||.+
T Consensus       331 GNtssAsi~~~L~~~~~~----g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~  384 (387)
T 3a5r_A          331 GNMSSATVFFIMDEMRKK----SL-ENGQATTGEGLEWGVLFGFGPGITVETVVLRSVP  384 (387)
T ss_dssp             CBCGGGHHHHHHHHHHHH----HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             CCcchhHHHHHHHHHHHh----cc-ccCCCCCCCCcceEEEEEecCcceeeehhheecc
Confidence            999999999999999987    54 444     32389999999999999999999973

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=100.00  E-value=3.6e-60  Score=464.29  Aligned_cols=323  Identities=21%  Similarity=0.230  Sum_probs=267.9

Q ss_pred             cccCCCCCc-EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccC
Q 044410           15 TVKSNQGPT-ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCY   93 (402)
Q Consensus        15 ~~~~~~~~~-~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~   93 (402)
                      +++..++|. .+|.|+|+|+|+++++|+|+.+.+   ..+         .+||.++|||++||++.++|           
T Consensus         4 ~~~~~~~~~~srI~g~g~ylP~~~v~n~el~~~~---~~~---------~e~I~~rtGI~~R~~a~~~e-----------   60 (350)
T 4ewp_A            4 TLKQHERPAASRIVAVGAYRPANLVPNEDLIGPI---DSS---------DEWIRQRTGIVTRQRATAEE-----------   60 (350)
T ss_dssp             CCCCCCCCSEEEEEEEEEECCSCEEEHHHHTTTT---TCC---------HHHHHHHHCCSEEECCCSSC-----------
T ss_pred             ccccccCCCCCEEEEEEEEcCCCeEcHHHHHHHh---CCC---------HHHHHhccCceEEEEcCCCC-----------
Confidence            445566774 679999999999999999998764   222         37999999999999998776           


Q ss_pred             CCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccc
Q 044410           94 EAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCY  172 (402)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~  172 (402)
                                    +..+||++|+++||+++|++++|||+||++|+++ +..|+++.+|+++||+++.+  +++++++|+
T Consensus        61 --------------~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~--a~di~~~C~  124 (350)
T 4ewp_A           61 --------------TVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAP--AYDVSAACA  124 (350)
T ss_dssp             --------------CHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSC--EEEEECGGG
T ss_pred             --------------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCce--EEEeecchh
Confidence                          3899999999999999999999999999999999 88999999999999998775  899999999


Q ss_pred             hHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee
Q 044410          173 MGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ  252 (402)
Q Consensus       173 ~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~  252 (402)
                      |+++||++|.+++++|+.++||||++|.+|.. .++.+     +.+..+|||||+|+||++.+. .++..  ..+..++.
T Consensus       125 g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-~d~~~-----~~~~~lfgDGA~A~vl~~~~~-~~~~~--~~~~sdg~  195 (350)
T 4ewp_A          125 GYCYGVAQADALVRSGTARHVLVVGVERLSDV-VDPTD-----RSISFLLGDGAGAVIVAASDE-PGISP--SVWGSDGE  195 (350)
T ss_dssp             HHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-CCTTC-----TTTGGGBCEEEEEEEEEEESS-CCBCC--CEEEECGG
T ss_pred             hHHHHHHHhhhhhhCCCccceeEeeeeeceec-ccccc-----cccccccccchheeeeecccC-CCccc--eeeeeccc
Confidence            99999999999999999999999999999973 35543     346789999999999998765 33221  22222211


Q ss_pred             ----eecCCCcc--------------cccceeecC--ceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEE
Q 044410          253 ----TTVPDTEN--------------YISGQLKEM--GTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVV  310 (402)
Q Consensus       253 ----~~~p~~~~--------------~~~~~~~~~--g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~  310 (402)
                          ...+....              ...+.....  ...+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~-~did~~v~  274 (350)
T 4ewp_A          196 RWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAAGVEP-EDLAAFIP  274 (350)
T ss_dssp             GTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHHTCCG-GGEEEEEE
T ss_pred             ccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhhcCCh-hHhceEEe
Confidence                11111100              000000000  112444 789999999999999999999999997 999 9999


Q ss_pred             cCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceee
Q 044410          311 HPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETV  390 (402)
Q Consensus       311 H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~  390 (402)
                      ||+|+++++.++++||+|++|+...  ++++||||+|||+|++|++++++    |++++|   |+|++++||+|++|+++
T Consensus       275 Hq~~~~i~~~~~~~Lgl~~~~~~~~--~l~~~GNtssasi~~~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~  345 (350)
T 4ewp_A          275 HQANMRIIDEFAKQLKLPESVVVAR--DIADAGNTSAASIPLAMHRLLEE----NPELSG---GLALQIGFGAGLVYGAQ  345 (350)
T ss_dssp             CCSCHHHHHHHHHHTTCCTTSEECC--THHHHCBCGGGHHHHHHHHHHHH----CGGGTT---SEEEEEEEETTTEEEEE
T ss_pred             cCCCHHHHHHHHHHcCcChHhEEec--ccccccchHHHHHHHHHHHHHHh----CCCCCc---CEEEEEEEchhhEeEEE
Confidence            9999999999999999999997642  49999999999999999999998    999999   99999999999999999


Q ss_pred             EEeee
Q 044410          391 VLQSV  395 (402)
Q Consensus       391 ll~~~  395 (402)
                      ||||+
T Consensus       346 vlr~P  350 (350)
T 4ewp_A          346 VVRLP  350 (350)
T ss_dssp             EEECC
T ss_pred             EEEeC
Confidence            99985

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=100.00  E-value=2.4e-58  Score=463.32  Aligned_cols=373  Identities=22%  Similarity=0.301  Sum_probs=302.3

Q ss_pred             ecccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCc
Q 044410           12 DMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMC   91 (402)
Q Consensus        12 ~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~   91 (402)
                      -|+....+..+.++|.++|+|+|+++++|+++.+.+.... .+.  ...++..+|++++||++||++.+++    +|...
T Consensus        20 ~~~~~~~~~~~~v~I~gigt~lP~~~v~n~el~~~~~~~~-~~~--~~~~~~~~i~~~tGI~~R~~~~~~~----~p~~~   92 (465)
T 3e1h_A           20 HMAASTVAGELGLSITGLGVQYPPYSLGPDAIDILSKRYH-PES--PAMKKVLAINRYTGIDQRSSIGNPD----HPLVN   92 (465)
T ss_dssp             --------CCCCEEEEEEEEECCSSCCBCTHHHHHTCSSS-CCC--HHHHHHHHHTTTSCCCCBCCSSCTT----CGGGS
T ss_pred             cccCCCcCCCCCEEEEEEEEECCCcEEcHHHHHHHHHHhc-ccc--hhHHHHHHHHHhcCCceEEEeeccc----Ccccc
Confidence            3555555566669999999999999999999977542211 111  1123445699999999999997643    23344


Q ss_pred             cCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccc
Q 044410           92 CYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY-TQG  170 (402)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i-~~~  170 (402)
                      .++.|++++|++.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+. .+++ +++
T Consensus        93 ~~~~ps~~~r~~~~~~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~-~~dv~~~~  171 (465)
T 3e1h_A           93 KPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLE-KVLLHGIG  171 (465)
T ss_dssp             SSSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCE-EEEECSCG
T ss_pred             cccCCCHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCee-EEEecCCc
Confidence            56789999999999999999999999999999999999999999999888889999999999999997653 6888 799


Q ss_pred             cchHHHHHHHHHHHHHc----CCCCeEEEEEeccCccccCCCCcc----chhhhhhhhhhccCcEEEEEccCCCCCCCCC
Q 044410          171 CYMGGTVIRLAKDIAEN----NPGARVLVVCSDIRVLDFHEPSET----HLDVLVVQAVFGDGAGAAIIGADSDISNHES  242 (402)
Q Consensus       171 C~~~~~al~~A~~~i~~----g~~~~vLvv~~e~~s~~~~~~~~~----~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~  242 (402)
                      |+|+++||.+|.++|++    |..++||||++|++|..+ ++..+    ..+++.+..+|||||+|+||++++...+...
T Consensus       172 Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~-~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~~~  250 (465)
T 3e1h_A          172 CSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMV-RSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKP  250 (465)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGH-HHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTTCC
T ss_pred             chHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhc-CcccccccccccccccccccccceeEEEEEccCCCccccc
Confidence            99999999999999997    889999999999998744 22100    0124568899999999999998754111122


Q ss_pred             CceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhcc-------CCCCCCcceEEEEcCCCH
Q 044410          243 PLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSP-------IGISDWNSLFYVVHPGGD  315 (402)
Q Consensus       243 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~-------~gl~~~~di~~i~H~~~~  315 (402)
                      ..+++.+....++|.+.+.+.|.+.+.|+.++++++||+++.+.++++++++|++       +|++. +||.|++||+|+
T Consensus       251 ~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~-~DId~~~Hqan~  329 (465)
T 3e1h_A          251 AIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKP-ADFDWAMHPGGA  329 (465)
T ss_dssp             CSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSG-GGSEEEECCSSH
T ss_pred             cceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCH-HHceEEecCCCh
Confidence            3577777667778998887888887788878889999999999999999999876       67886 999444999999


Q ss_pred             HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCC-CCCceEEEEEEcccccceeeEEee
Q 044410          316 GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTG-EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       316 ~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G-~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +|++.++++||++++|+..+++++++||||+|||+|++|++++++..  |++++| .++|+|++++||+|++|++++|||
T Consensus       330 rIl~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~--g~l~~Gg~~~d~vll~gfG~Glt~~~~llr~  407 (465)
T 3e1h_A          330 TILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDM--DALAPGGKVKEYVVGCAFGPGINVEMCMLKR  407 (465)
T ss_dssp             HHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTT--TSCSSSSCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred             HHHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcc--cccCCCCCCCCEEEEEEEhHHHhhhheeeEE
Confidence            99999999999999999988889999999999999999999987511  356654 122899999999999999999999


Q ss_pred             ec
Q 044410          395 VS  396 (402)
Q Consensus       395 ~~  396 (402)
                      ..
T Consensus       408 ~~  409 (465)
T 3e1h_A          408 RM  409 (465)
T ss_dssp             CC
T ss_pred             ec
Confidence            54

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=100.00  E-value=8.3e-57  Score=446.61  Aligned_cols=349  Identities=23%  Similarity=0.281  Sum_probs=298.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhh---------h------CC
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILK---------E------NP   88 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~---------~------~~   88 (402)
                      ++|.++|+++|++.++|+++.+.+.... +++ .++++ ..+|++++||++||++.+.+...         .      .|
T Consensus        27 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~-~~~-~~~~~-~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~  103 (413)
T 3v7i_A           27 AYLCAPAVIHGEHSVETREIVEEVRGRH-PHA-PWAPR-IDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAREALVRD  103 (413)
T ss_dssp             EEEECCEEEECSEEEEHHHHHHHHHHHC-SSC-SSGGG-HHHHHHHHTCSEEEESSCHHHHHSCCCCCCCHHHHHHC---
T ss_pred             eEEEeeEeeCCCcccCHHHHHHHHHHhc-ccc-hhHHH-HHHHHHhCCcCeeeeecCHHHhccccccccccccccccccc
Confidence            8999999999999999999999886532 222 22332 57899999999999999976530         0      01


Q ss_pred             CCc-------------cCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHc
Q 044410           89 NMC-------------CYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLL  155 (402)
Q Consensus        89 ~~~-------------~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~L  155 (402)
                      .++             ....+++.+|+..+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+.+.+|+.+|
T Consensus       104 ~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~L  183 (413)
T 3v7i_A          104 GFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRL  183 (413)
T ss_dssp             ---CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHT
T ss_pred             ccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHh
Confidence            121             1567899999999999999999999999999999999999999999999988899999999999


Q ss_pred             CCCCccccceee-ccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccC
Q 044410          156 GLKPSVNRLMIY-TQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAD  234 (402)
Q Consensus       156 Gl~~~~~~~~~i-~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~  234 (402)
                      |+++.+. .+++ +++|+|++.||.+|.++|++|+.++||||++|++|..+ ++.|++.++.+...+|||||+|+||+++
T Consensus       184 Gl~~~~~-~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-~~~d~~~~~lv~~~LFGDGAaAvvl~~~  261 (413)
T 3v7i_A          184 PLRGDTM-LLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-QPADDTLESLIVRLLFADTAVAAVVTGR  261 (413)
T ss_dssp             TCCTTCE-EEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-CSSCCSTTHHHHHHHBCCEEEEEEEESS
T ss_pred             CCCCCce-EEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-CccccchhhhhcceeeccccEEEEEEec
Confidence            9997543 6777 99999999999999999999999999999999999755 5665545556678999999999999987


Q ss_pred             CCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhc------cCCCCCCcce-E
Q 044410          235 SDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS------PIGISDWNSL-F  307 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~------~~gl~~~~di-~  307 (402)
                      +. .+   +.+++.+..+.++|++.+.+.|.+.+.|+.+.|.+++|. +++.++++++++|+      ++|++    | +
T Consensus       262 ~~-~~---~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~-~v~~~~~~i~~~L~~~~~~~~~gl~----id~  332 (413)
T 3v7i_A          262 PR-PE---SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPR-AVQETVTAMWEWLRVRYEDDPSSWH----PDV  332 (413)
T ss_dssp             CC-TT---EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHH-HHHHHHHHHHHHHHHHTSSSCTTCC----CCE
T ss_pred             CC-CC---CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHH-HHHHHHHHHHHHHhhccccccCCCc----eeE
Confidence            64 21   356777777778899888888888888888888777885 55669999999999      88876    5 9


Q ss_pred             EEEcCCCHHHHHHHHHHcC--CCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccc
Q 044410          308 YVVHPGGDGLLDQVEKTLG--LRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGL  385 (402)
Q Consensus       308 ~i~H~~~~~~~~~~~~~lg--i~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~  385 (402)
                      |++||+|++|++.++++||  +++||+..++.+++ ||||+|||+|++|++++ +    +++++|   |++++++||+|+
T Consensus       333 ~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~-~----~~~~~G---d~vll~~fG~Gl  403 (413)
T 3v7i_A          333 LLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH-D----AGQKTG---SRAVLYAAAPGL  403 (413)
T ss_dssp             EEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-H----HCCCTT---CEEEEEEEETTT
T ss_pred             EEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-h----CCCCCC---CEEEEEEECHHH
Confidence            9999999999999999999  99999977677899 99999999999999998 5    789999   999999999999


Q ss_pred             cceeeEEeee
Q 044410          386 TVETVVLQSV  395 (402)
Q Consensus       386 ~~~~~ll~~~  395 (402)
                      +|++++|||.
T Consensus       404 t~~~~ll~w~  413 (413)
T 3v7i_A          404 TATALEGEWL  413 (413)
T ss_dssp             EEEEEEEEEC
T ss_pred             hHhhhheEeC
Confidence            9999999994

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=100.00  E-value=1.3e-55  Score=433.85  Aligned_cols=315  Identities=19%  Similarity=0.233  Sum_probs=265.2

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.++  ..+         .+||.+++||++||++.+++                     
T Consensus        31 v~I~gig~~lP~~~v~n~~l~~~~~--~~~---------~~~i~~~tGI~~R~~a~~~~---------------------   78 (365)
T 3gwa_A           31 AAIADIAGHLPEQVLTNDVLAQLYP--DWP---------AEKILAKTGIRERRIAAPRE---------------------   78 (365)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHHHCT--TCC---------HHHHHHHHCCCEEEECCTTC---------------------
T ss_pred             EEEEEEEEeCCCcEEcHHHHHHHcc--CCC---------HHHHHHhcCccEEEECCCCC---------------------
Confidence            7999999999999999999998642  111         37999999999999998765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ++.+|+.+|+++||+++|++++|||.||++++++ +..|+.+.+|+.+||++.... +++++++|+|++.||.+|.
T Consensus        79 ----~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~C~s~~~Al~~A~  153 (365)
T 3gwa_A           79 ----TAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAG-ALDVNLGCSGYVYGLSLAK  153 (365)
T ss_dssp             ----CHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSE-EEEEECSTTHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCce-EEEecccChHHHHHHHHHH
Confidence                3899999999999999999999999999999998 788999999999999984332 8899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeee----ee---
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQ----TT---  254 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~----~~---  254 (402)
                      ++|++|..++|||+++|.+|..+ ++.     ++....+|||||+|+||++++... ++  ..+.+.+.+.    ..   
T Consensus       154 ~~i~~g~~~~vLvvg~e~~s~~~-~~~-----dr~~~~lfGDGAaA~vl~~~~~~~~~i--~~~~~~s~g~~~~~~~~~~  225 (365)
T 3gwa_A          154 GLVETGAARCVLLLTADTYSKYL-HPL-----DKSVRTLFGDGASATAVIAEHGELERI--GPFVFGTDGRGAPNLIVKA  225 (365)
T ss_dssp             HHHHTTSCSEEEEEEEECGGGGS-CTT-----CHHHHTTBCCEEEEEEEEEECSSSCSE--EEEEEEECGGGGGGEEECS
T ss_pred             HHHHcCCCCEEEEEEEchhhccC-Ccc-----cccccccccceeEEEEEEecCCCCCce--EEEEEEEcCCCCCeEEecC
Confidence            99999999999999999999744 443     244678999999999999876511 11  0123333222    11   


Q ss_pred             ----cCCCcccccceeecCc-----eEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHH
Q 044410          255 ----VPDTENYISGQLKEMG-----TYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEK  323 (402)
Q Consensus       255 ----~p~~~~~~~~~~~~~g-----~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~  323 (402)
                          .|.+.+.+.|.....+     ..+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++
T Consensus       226 gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~n~~i~~~~~~  304 (365)
T 3gwa_A          226 GLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEPR-ENIDCFVLHQANRFMLDALRK  304 (365)
T ss_dssp             SSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHH
T ss_pred             CCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHH
Confidence                2333333344332221     12444 789999999999999999999999997 999 99999999999999999


Q ss_pred             HcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       324 ~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +||+|+||++.+   +++||||+|||+|++|++++++    |++++|   |+|++++||+|++|+++||||
T Consensus       305 ~Lgl~~ek~~~~---l~~~GNtssAsipl~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~  365 (365)
T 3gwa_A          305 KMKIPEHKFPVL---MEHCGNTVSSTLPLALETMRAN----GTLARG---MRLMLLGFGVGYSWAGCLVNF  365 (365)
T ss_dssp             HHTCCGGGSCCC---CTTTCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred             HhCCCHHHHHHH---HhcccchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence            999999999875   9999999999999999999998    999999   999999999999999999998

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=100.00  E-value=2.2e-55  Score=425.23  Aligned_cols=308  Identities=20%  Similarity=0.270  Sum_probs=260.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      .+|.|+|+|+|+++++|+|+.+.+   ..+         .+||.+++||++||++.+++                     
T Consensus        10 ~~~~~~g~ylP~~~v~n~~l~~~~---~~~---------~~~i~~~tGi~~R~~a~~~~---------------------   56 (323)
T 3il3_A           10 SRILSTGSYLPSHIRTNADLEKMV---DTS---------DEWIVTRSGIRERRIAAEDE---------------------   56 (323)
T ss_dssp             ECCCEEEEECCSCEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEECCCTTC---------------------
T ss_pred             CceeEEEEECCCceEcHHHHHHHh---CCC---------HHHHHHhcCCcEEEECCCCC---------------------
Confidence            689999999999999999998764   222         37999999999999998766                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ++.+|+.+|+++||+++|++++|||.||++++++ +..|+++.+++.+||+++.+  +++++++|+|++.||.+|.
T Consensus        57 ----~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~~C~s~~~al~~A~  130 (323)
T 3il3_A           57 ----TVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAI--SFDLAAACTGFVYALSVAD  130 (323)
T ss_dssp             ----CHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCE--EEEECCGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCCCcc--EEEECCccHHHHHHHHHHH
Confidence                3899999999999999999999999999999998 78899999999999997554  8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..++||||++|.+|..+ ++.+     +.+..+|||||+|+||++++. .++.  .+.+...+.    ...|+.
T Consensus       131 ~~i~~g~~~~vLvvg~e~~s~~~-~~~d-----~~~~~lfGDGA~A~vl~~~~~-~~i~--~~~~~s~g~~~~~~~~~g~  201 (323)
T 3il3_A          131 QFIRAGKVKKALVIGSDLNSRKL-DETD-----RSTVVLFGDGAGAVILEASEQ-EGII--STHLHASADKNNALVLAQP  201 (323)
T ss_dssp             HHHHTTSCSEEEEEEEEEGGGSC-CTTC-----TTTTTTBCEEEEEEEEEEESS-CCEE--EEEEEECCCCSCSEECCCC
T ss_pred             HHHHCCCCCEEEEEEeecccccc-Cccc-----cccccccccceEEEEEEEcCC-CCeE--EEEEEEcCCCcceEEECCC
Confidence            99999999999999999999744 4433     336789999999999998754 3211  122222221    123322


Q ss_pred             cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410          259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY  337 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~  337 (402)
                      ..  .  ....++....++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|+||++.+  
T Consensus       202 ~~--~--~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~--  274 (323)
T 3il3_A          202 ER--G--IEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDK-KDLDWLVPHQANLRIITATAKKLEMDMSQVVVT--  274 (323)
T ss_dssp             CT--T--CSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCT-TTCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC--
T ss_pred             CC--C--CCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCcCHHHhhcc--
Confidence            11  0  0111222223789999999999999999999999997 999 99999999999999999999999999875  


Q ss_pred             HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                       +++||||++||+|++|++++++    |++++|   |+|++++||+|++|++++|||
T Consensus       275 -l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~~l~~  323 (323)
T 3il3_A          275 -LDKYANNSAATVPVALDEAIRD----GRIQRG---QLLLLEAFGGGWTWGSALVRF  323 (323)
T ss_dssp             -HHHHCBCGGGHHHHHHHHHHHT----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred             -HhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence             9999999999999999999998    999999   999999999999999999998

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=100.00  E-value=4.7e-55  Score=428.26  Aligned_cols=319  Identities=18%  Similarity=0.219  Sum_probs=266.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+|+.+.+..           ...+||.+++||++||++.+++                     
T Consensus        17 v~I~~ig~~lP~~~v~n~~l~~~~~~-----------~~~~~i~~~tGI~~R~~a~~~~---------------------   64 (354)
T 4efi_A           17 ARIAGVVSCVPSKQVDNDYFVERFDA-----------SAVRDVVKMIGVNRRRWADAQT---------------------   64 (354)
T ss_dssp             EEEEEEEEEECSCEEEGGGGTTTSCH-----------HHHHHHHHHHCCSEEECCCTTC---------------------
T ss_pred             eEEEEEEEECCCcEEcHHHHHHHhCC-----------CcHHHHHHhcCCeEEEEcCCCC---------------------
Confidence            79999999999999999999875310           1237999999999999997765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+.+||++.... +++++++|+|++.||.+|.
T Consensus        65 ----~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~s~~~al~~A~  139 (354)
T 4efi_A           65 ----SAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCL-ALDINLGCSGYPQALWLGM  139 (354)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSE-EEEECCCTTHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCcc-EEeeCcccHHHHHHHHHHH
Confidence                3899999999999999999999999999999998 889999999999999963332 8899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..++|||+++|.+|..+ ++.     ++.+..+|||||+|+||++++. .+.  ..+.+.+.+.    ..+|..
T Consensus       140 ~~i~~g~~~~vLvvg~e~~s~~~-~~~-----d~~~~~lfGDGA~A~vl~~~~~-~~~--~~~~~~s~g~~~~~~~~~~~  210 (354)
T 4efi_A          140 NLIQTGAAKRVLLAVGDTISKMI-DPT-----DRSTSLLFGDAGTMTALETSNG-DAA--AHFIIGADGKGARNLIVPSG  210 (354)
T ss_dssp             HHHHTTSCSEEEEEEEECGGGGC-CTT-----CHHHHTTBCCEEEEEEEEECCS-CCE--EEEEEEECGGGGGGEECCSS
T ss_pred             HHHHCCCCCEEEEEEechhcccC-Ccc-----ccccccccccceeEEEEeecCC-CCc--eEEEEEEcCCCcceEEecCC
Confidence            99999999999999999999744 443     2446789999999999998775 221  1233433332    123321


Q ss_pred             ------ccc-ccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCc
Q 044410          259 ------ENY-ISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRK  329 (402)
Q Consensus       259 ------~~~-~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~  329 (402)
                            .+. ..+..+... .+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|+
T Consensus       211 g~~p~~~~~~~~~~~~~~~-~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~Lgl~~  288 (354)
T 4efi_A          211 GFKPYDAAADERMAGKSPE-CLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDK-DSYDAFLFHQANLFMLKHLAKKAGLPA  288 (354)
T ss_dssp             SSSCCCGGGCGGGTTCCTT-SCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHHHTTCCG
T ss_pred             CCCCCcccccccccccccc-ceEEccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHhCcCH
Confidence                  110 011111111 2333 788999999999999999999999997 999 99999999999999999999999


Q ss_pred             cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCcc
Q 044410          330 EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFT  400 (402)
Q Consensus       330 ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~~  400 (402)
                      +|++.+   +++||||+|||+|++|++++++    |++++|   |+|++++||+|++|++++|||.+.-|.
T Consensus       289 ek~~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~~~~~~~  349 (354)
T 4efi_A          289 ERVPVN---IGEYGNTSCASIPLLITTELKD----RLKEET---LQLGMFGFGVGYSWASAALAVGPLNIV  349 (354)
T ss_dssp             GGSCCC---HHHHCBCGGGHHHHHHHHHSHH----HHHHSC---EEEEEEEEETTTEEEEEEEEECCCSCE
T ss_pred             HHHHHH---HhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheeeEEEECCcccc
Confidence            999875   9999999999999999999998    889999   999999999999999999999887654

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=100.00  E-value=2.9e-53  Score=419.01  Aligned_cols=361  Identities=30%  Similarity=0.516  Sum_probs=293.5

Q ss_pred             CCCceeecccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhh
Q 044410            6 SNSRLYDMTTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILK   85 (402)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~   85 (402)
                      |.+++. |++.    .+ ++|.|+|+|+|+++++|+++.+.+......+  .+..+..+||.+++||++||++.++  +.
T Consensus         2 ~~~~~~-~~~~----~~-v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~i~~~~Gi~~R~~~~~~--~~   71 (374)
T 2h84_A            2 SLSRLS-YKSN----NN-SFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHLVRDY--TK   71 (374)
T ss_dssp             ---------------CC-CEEEEEEEECSSSCEEHHHHHHHHHHHSCSC--HHHHHHHHHHHHTTCCCEECCSSCT--TS
T ss_pred             chhhhh-ccCC----CC-eEEEEEEEeCCCcccCHHHHHHHHHHhhccC--hHHHHHHHHHHHhCCcCcceeecCc--cc
Confidence            344554 5533    45 8999999999999999999998765322111  2233456789999999999998665  11


Q ss_pred             hCCCCccCCCCChHHHHHH---HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccc
Q 044410           86 ENPNMCCYEAPSLDARQAM---LIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVN  162 (402)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~---~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~  162 (402)
                      .+|.+.   -+++.+|++.   +.+...+|+.+|+++||+++|+++++||+||+++++++..|+.+.+|+.+||+++...
T Consensus        72 ~~~~~~---~~~~~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~  148 (374)
T 2h84_A           72 PENSIK---FRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVE  148 (374)
T ss_dssp             GGGCGG---GGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCE
T ss_pred             cccccc---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCc
Confidence            223322   2356667776   8899999999999999999999999999999999988778999999999999987432


Q ss_pred             cceeec-cccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCC
Q 044410          163 RLMIYT-QGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHE  241 (402)
Q Consensus       163 ~~~~i~-~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~  241 (402)
                       .+++. ++|+|++.||.+|.++|++|..++|||+++|.++..+.+|.+  ++.....++|||||+|+||++.+. .. .
T Consensus       149 -~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~~~~d--r~~~~~~~lfGDGA~A~vL~~~~~-~~-~  223 (374)
T 2h84_A          149 -RVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDG--GDQMVASSIFADGSAAYIIGCNPR-IE-E  223 (374)
T ss_dssp             -EEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGGCCCSSS--HHHHHHHHHBCCEEEEEEEESSCC-TT-C
T ss_pred             -eEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchhhcCCCC--HHHHhhhhhhccCcEEEEEecCCC-cc-c
Confidence             78886 899999999999999999999999999999999865544533  333345789999999999998765 21 1


Q ss_pred             CCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCC------CCCCcce-EEEEcCCC
Q 044410          242 SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIG------ISDWNSL-FYVVHPGG  314 (402)
Q Consensus       242 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g------l~~~~di-~~i~H~~~  314 (402)
                      ...+++.+.+..++|++.+.+.|.+..+|+.+.+++++|+++.+.++++++++|+++|      +++ +|| +| +||+|
T Consensus       224 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~-~did~~-~H~~~  301 (374)
T 2h84_A          224 TPLYEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISA-KDCEFL-IHTGG  301 (374)
T ss_dssp             CCCEEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCS-SSSEEE-ECCCC
T ss_pred             CCceeEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCCh-hhcCEe-ECCCC
Confidence            1246777777777787766666766677777778999999999999999999999999      997 999 99 99999


Q ss_pred             HHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          315 DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       315 ~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .++++.+++.||++++|+..+++++++||||++||+|++|++++++    ++  +|   |+|++++||+|++|++++|||
T Consensus       302 ~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~----~~--~G---d~vll~~~G~G~t~~~~ll~~  372 (374)
T 2h84_A          302 KSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKS----KS--LP---TYSISLAFGPGLAFEGCFLKN  372 (374)
T ss_dssp             HHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTC----SC--CC---SEEEEEEEETTTEEEEEEEEE
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHhh----cC--CC---CeEEEEEeccchhhhhhhhee
Confidence            9999999999999999998766789999999999999999999987    66  78   999999999999999999998


Q ss_pred             e
Q 044410          395 V  395 (402)
Q Consensus       395 ~  395 (402)
                      .
T Consensus       373 ~  373 (374)
T 2h84_A          373 V  373 (374)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4.6e-55  Score=432.78  Aligned_cols=337  Identities=20%  Similarity=0.282  Sum_probs=270.0

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhh---cCCCChhHHH---------HHHHHHHHHcCcceeecccchhHhhhCCCCc
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRV---TNSDHKTELK---------EKFKRICERQSIKKRYFHLTEEILKENPNMC   91 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~---~~~~~~~~~~---------~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~   91 (402)
                      ++|.|+|+|+|+++++|+|+.+.+...   .++++.+++.         ...+||.+++||++||++.+++.++  |   
T Consensus        25 ~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~~tGI~~R~~a~~~~~~~--~---   99 (392)
T 3led_A           25 AVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGIKSRYVVAKPGIVD--P---   99 (392)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHHHHCCCEEEESCCGGGGC--T---
T ss_pred             eEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHHccCCceEEEecCccccc--c---
Confidence            899999999999999999998865321   1111111111         0248999999999999998765332  1   


Q ss_pred             cCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccc
Q 044410           92 CYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQG  170 (402)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~  170 (402)
                      .++.|++++|++.+.+.+.+|+++|+++||+++|++++|||+||++++++ +..|+++.+|+.+||++ .+  +++++++
T Consensus       100 ~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~-~~--~~dv~~a  176 (392)
T 3led_A          100 DVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG-GF--AFDMNVA  176 (392)
T ss_dssp             TTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC-SE--EEEEECG
T ss_pred             cccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC-Ce--EEEECCc
Confidence            23567788888877778999999999999999999999999999999998 88999999999999995 33  8999999


Q ss_pred             cchHHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEee
Q 044410          171 CYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSC  250 (402)
Q Consensus       171 C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~  250 (402)
                      |+|++.||.+|.++|++|..++||||++|.+|..+ ++.|     +.+..+|||||+|+||++.+. ..   ..+.+.+.
T Consensus       177 C~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~~-d~~d-----r~t~~lFGDGA~A~vl~~~~~-~~---~~~~i~~~  246 (392)
T 3led_A          177 CSSATFGLKTAADFVGGGSVDAVLMVNPEICSGHL-NFRD-----RDSHFIFGDVATAAIVERADD-AQ---GGWSILGT  246 (392)
T ss_dssp             GGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-CTTC-----TTTTTTBCEEEEEEEEEEGGG-CC---SSEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCcC-CcCc-----ccCCcccccccEEEEEEecCC-CC---CCCeEEEE
Confidence            99999999999999999999999999999999743 4443     235789999999999998764 11   12333332


Q ss_pred             eeee-------cCC------CcccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCH
Q 044410          251 TQTT-------VPD------TENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGD  315 (402)
Q Consensus       251 ~~~~-------~p~------~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~  315 (402)
                      ....       .+.      ..+.+.|.    ...+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.
T Consensus       247 ~~~s~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~-~dId~~v~Hqan~  321 (392)
T 3led_A          247 KLKTQFSNNIRNNAGFLNRAWPEGRDKA----DKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDP-HGLKRMWLHQANI  321 (392)
T ss_dssp             EEEECCCSSEEBCCSGGGGGSGGGTTSG----GGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECSSCH
T ss_pred             EEEEccccccccCCCcccCCCccccccc----cceEEechHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCcEEEEcCCCH
Confidence            2111       111      01111111    112334 789999999999999999999999997 999 999999999


Q ss_pred             HHHHHHHHHc-C--CCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEE
Q 044410          316 GLLDQVEKTL-G--LRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL  392 (402)
Q Consensus       316 ~~~~~~~~~l-g--i~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll  392 (402)
                      +|++.++++| |  ++.+|++.+   +++||||+|||+|++|+++  .    +++++|   |+|++++||+|++|+++||
T Consensus       322 ~i~~~~~~~llgl~~~~~k~~~~---l~~~GNtssAsipl~L~~~--~----~~~~~G---d~vll~gfG~G~t~~~~ll  389 (392)
T 3led_A          322 NMNEIIGRKVLGRDPTRDENVII---LDDYANTSSAGSIIAFHKH--Q----DDMAQG---DLGLICSFGAGYSAGTVFV  389 (392)
T ss_dssp             HHHHHHHHHHHTSCCCTTTBCCC---HHHHCBCGGGHHHHHHHHC--C----TTCCTT---CEEEEEEEETTTEEEEEEE
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHH---HhhhCccHHHHHHHHHHHH--h----CCCCCC---CEEEEEEEChhhEeEEEEE
Confidence            9999999996 6  678898764   9999999999999999985  3    779999   9999999999999999999


Q ss_pred             eee
Q 044410          393 QSV  395 (402)
Q Consensus       393 ~~~  395 (402)
                      ||.
T Consensus       390 ~~~  392 (392)
T 3led_A          390 QKR  392 (392)
T ss_dssp             EEC
T ss_pred             EEC
Confidence            984

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=100.00  E-value=4e-53  Score=420.49  Aligned_cols=355  Identities=24%  Similarity=0.406  Sum_probs=291.7

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeec-ccchhHhhhCCCCccCCCCChHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYF-HLTEEILKENPNMCCYEAPSLDARQ  102 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~  102 (402)
                      ++|.++|+|+|+++++|+++.+.+......+   ...++.+||++++||++||+ +.+++.   ++.+....-+.+.+|+
T Consensus        33 ~~I~~ig~~~P~~~v~n~~l~~~~~~~~~~~---~~~~~~~~i~~~tGI~~R~~~a~~~~~---~~~~~~~~p~~~~~r~  106 (393)
T 1ted_A           33 AVIEGLATGTPRRVVNQSDAADRVAELFLDP---GQRERIPRVYQKSRITTRRMAVDPLDA---KFDVFRREPATIRDRM  106 (393)
T ss_dssp             EEEEEEEEECCSCEEEHHHHHHHHHTC-------CCTTHHHHHHHTSCCSEEECSSCTTST---THHHHTTCSSCHHHHH
T ss_pred             cEEEEeeeeCCCcccCHHHHHHHHHHhcccc---cHHHHHHHHHHhCCcCcceeeecChHh---cccccccCCCCHHHHH
Confidence            7999999999999999999998764211000   00123579999999999999 876421   0000011123578899


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccchHHHHHHHH
Q 044410          103 AMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY-TQGCYMGGTVIRLA  181 (402)
Q Consensus       103 ~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i-~~~C~~~~~al~~A  181 (402)
                      +.+.+...+|+.+|+++||+++|+++++||.||+++++++..|+++.+|+.+||+++.+. .+++ +++|+|++.||.+|
T Consensus       107 ~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~aCas~~~Al~~A  185 (393)
T 1ted_A          107 HLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSIS-RVVVNFMGCAAAMNALGTA  185 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcc-eeEeccchhHHHHHHHHHH
Confidence            999999999999999999999999999999999999988778999999999999987532 5676 89999999999999


Q ss_pred             HHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCC-ceEEEeeeeeecCCCcc
Q 044410          182 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESP-LFQILSCTQTTVPDTEN  260 (402)
Q Consensus       182 ~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~  260 (402)
                      .++|++|..++|||+++|.++..+ ++ +.++++....++|||||+|+||++.+. ...... ..++.+.+....+++..
T Consensus       186 ~~~i~~G~~~~vLv~g~e~~s~~~-~~-~~~r~~~~~~~lfGDGA~A~vL~~~~~-~~~~~~~~~~i~~~~~~~~~d~~~  262 (393)
T 1ted_A          186 TNYVRAHPAMKALVVCIELCSVNA-VF-ADDINDVVIHSLFGDGCAALVIGASQV-QEKLEPGKVVVRSSFSQLLDNTED  262 (393)
T ss_dssp             HHHHHHSTTCEEEEEEEEECGGGC-CC-CSSHHHHHHHHHBCEEEEEEEEEEECT-TSCCCTTCEEEEEEEEEECTTCTT
T ss_pred             HHHHHcCCCCEEEEEEEEeccccC-CC-CCCHHHhhhhhhhcCccEEEEEecCCC-ccccCcceeeeeccceEEcCCchh
Confidence            999999999999999999999644 22 233555556899999999999987654 210111 23666655555676655


Q ss_pred             cccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHH
Q 044410          261 YISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVL  339 (402)
Q Consensus       261 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l  339 (402)
                      .+.|.....++.++.++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||++++|+..+|+++
T Consensus       263 ~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~dId~~~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~  341 (393)
T 1ted_A          263 GIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQI-SDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL  341 (393)
T ss_dssp             SEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred             hccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCH-hHCCEEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            556666666666667999999999999999999999999997 999 999999999999999999999999998877789


Q ss_pred             HhcCCCCcchHHHHHHHHHHhhhhhhcc-cCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          340 REYGNMGAPSVFFILDEVRKKSIEEMKA-TTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       340 ~~~Gn~~sasi~i~L~~~~~~~~~~g~i-~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      ++||||++||+|++|++++++    |++ ++|   |+|++++||+|++|++++|||..
T Consensus       342 ~~~GNt~sAsi~~~L~~~~~~----g~~~~~G---d~vll~~~G~G~t~~~~~l~~~~  392 (393)
T 1ted_A          342 ARFGNMLSVSLIFVLETMVQQ----AESAKAI---STGVAFAFGPGVTVEGMLFDIIR  392 (393)
T ss_dssp             HHHCBCTHHHHHHHHHHHHHS----CSSSSSS---EEEEEEEEETTTEEEEEEEEECC
T ss_pred             HhhCCchHhHHHHHHHHHHhc----CccCCCC---CeEEEEEeccchhhhhhheeecc
Confidence            999999999999999999998    888 599   99999999999999999999974

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=100.00  E-value=3.9e-54  Score=422.00  Aligned_cols=317  Identities=18%  Similarity=0.217  Sum_probs=260.5

Q ss_pred             CCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHH
Q 044410           21 GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDA  100 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~  100 (402)
                      .+ ++|.++|+|+|+++++|+++.+.+   ..+         .+||.+++||++||++.+++                  
T Consensus        24 ~~-~~I~~~g~~~P~~~v~~~~l~~~~---~~~---------~~~i~~~tGi~~R~~a~~~~------------------   72 (359)
T 3h78_A           24 GN-PILAGLGFSLPKRQVSNHDLVGRI---NTS---------DEFIVERTGVRTRYHVEPEQ------------------   72 (359)
T ss_dssp             CC-CEEEEEEEECCSEEEEHHHHTTTS---SCC---------HHHHHHHHCCCEEEECCTTC------------------
T ss_pred             CC-cEEEEEEEECCCceEcHHHHHHHh---CCC---------HHHHHHhcCceEEEEcCCCC------------------
Confidence            44 899999999999999999998764   211         37999999999999998765                  


Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHH
Q 044410          101 RQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIR  179 (402)
Q Consensus       101 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~  179 (402)
                             +..+|+.+|+++||+++|++++|||+||++++++ +..|+++.+++.+||+++.+  +++++++|+|++.||.
T Consensus        73 -------~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~aC~s~~~Al~  143 (359)
T 3h78_A           73 -------AVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIP--VLDIRAQASGLLYGLQ  143 (359)
T ss_dssp             -------CTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCSCC--EEEEECGGGHHHHHHH
T ss_pred             -------CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCc--EEEECCHhHHHHHHHH
Confidence                   3899999999999999999999999999999998 78899999999999998644  8899999999999999


Q ss_pred             HHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC-CCCCCCCceEEEeeee----ee
Q 044410          180 LAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD-ISNHESPLFQILSCTQ----TT  254 (402)
Q Consensus       180 ~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~-~~~~~~~~~~~~~~~~----~~  254 (402)
                      +|.++|++|..++||||++|.+|..+ ++.+.   .+.+..+|||||+|+||++.+. ..++.  .+.+...+.    ..
T Consensus       144 ~A~~~i~sG~~~~vLvvg~e~~S~~~-~~~d~---~~~t~~lfGDGAaA~vl~~~~~~~~~i~--~~~~~s~g~~~~~~~  217 (359)
T 3h78_A          144 MARGQILAGLARHVLVVCGEVLSKRM-DCSDR---GRNLSILLGDGAGAVVVSAGESLEDGLL--DLRLGADGNYFDLLM  217 (359)
T ss_dssp             HHHHHHHTTSCSEEEEEEEEECGGGC-CCSTT---THHHHTTBCEEEEEEEEECCSCSSSEEE--EEEEEECGGGGGGEE
T ss_pred             HHHHHHHCCCcCEEEEEEEchhcccC-Ccccc---cccccceecceeEEEEEEecCCCCCceE--EEEEEEccCccceEE
Confidence            99999999999999999999999744 44431   1346789999999999998763 12110  122332222    12


Q ss_pred             cCC--Ccc-ccc---ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCC
Q 044410          255 VPD--TEN-YIS---GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGL  327 (402)
Q Consensus       255 ~p~--~~~-~~~---~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi  327 (402)
                      +|.  ... ...   +.....++..+.++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+
T Consensus       218 ~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~n~~i~~~~~~~lgl  296 (359)
T 3h78_A          218 TAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTL-DDIDHVICHQPNLRILDAVQEQLGI  296 (359)
T ss_dssp             BCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHHTC
T ss_pred             eCCCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCc
Confidence            332  111 000   000111222223789999999999999999999999997 999 999999999999999999999


Q ss_pred             CccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          328 RKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       328 ~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      |++|++.+   +++||||++||+|++|++++++      +++|   |+|++++||+|++|++++|||++
T Consensus       297 ~~ek~~~~---l~~~GNt~sAsi~l~L~~~~~~------l~~G---d~vll~~fG~G~t~~~~ll~~~~  353 (359)
T 3h78_A          297 PQHKFAVT---VDRLGNMASASTPVTLAMFWPD------IQPG---QRVLVLTYGSGATWGAALYRKPE  353 (359)
T ss_dssp             CGGGBCCC---HHHHCBCGGGHHHHHHHHHGGG------SCTT---CEEEEEEEETTTEEEEEEEECC-
T ss_pred             CHHHhhhh---hhcccchHHHHHHHHHHHHHHh------CCCC---CEEEEEEEchhhhheeeeEEehh
Confidence            99999875   9999999999999999998874      7899   99999999999999999999943

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=100.00  E-value=3.4e-54  Score=419.07  Aligned_cols=316  Identities=19%  Similarity=0.232  Sum_probs=261.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+++.+.+..... +      ...+||.+++||++||++.+++                     
T Consensus        12 v~I~g~g~~lP~~~v~~~~l~~~l~~~~~-~------~~~~~i~~rtgi~~r~~~~~~~---------------------   63 (333)
T 4dfe_A           12 SRVLGTGSYLPPNRVTNQDLAKRLAEQGI-E------TSDEWIVARTGIHARYFAEPDV---------------------   63 (333)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHHHHC---C-C------CCHHHHHHHHCCSEEEECCTTC---------------------
T ss_pred             eEEEEEEEECCCcEEcHHHHHHHhccccC-C------CCHHHhHHhcCceEEEEcCCCC---------------------
Confidence            89999999999999999999987521100 1      0137999999999999987765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+.+||++.... +++++++|+|++.||.+|.
T Consensus        64 ----~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~-~~~v~~~C~s~~~al~~A~  138 (333)
T 4dfe_A           64 ----TTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGA-AFDVQAVCSGFAYAVATAD  138 (333)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCE-EEEEECGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCc-EEEeCcccHHHHHHHHHHH
Confidence                3899999999999999999999999999999998 788999999999999954433 8899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|+.++|||+++|.+|..+ ++.+     +.+.++|||||+|+||++.+. .++.  .+.+...+.    ...|..
T Consensus       139 ~~i~~g~~~~vLvvg~e~~s~~~-~~~d-----~~~~~lfGDGA~A~vl~~~~~-~~i~--~~~~~~~g~~~~~~~~~~~  209 (333)
T 4dfe_A          139 SFIRSGQHRTALVIGAETFSRIL-DFKD-----RTTCVLFGDGAGAVILQASDE-PGVL--ASALHADGSHSNILCTPGN  209 (333)
T ss_dssp             HHHHTTSCSEEEEEEEEEGGGGC-CTTC-----TTTTTTBCEEEEEEEEEEESS-CSEE--EEEEEECGGGGGGEEBCEE
T ss_pred             HHHHcCCCCEEEEEEeecccccc-Cccc-----ccceeeeccccEEEEEEEcCC-CCeE--EEEEEEccCCcCeEEECCC
Confidence            99999999999999999999744 3433     235689999999999998764 3211  122332222    112211


Q ss_pred             cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410          259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY  337 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~  337 (402)
                      .  ..+.+...++....++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+++||++.+  
T Consensus       210 ~--~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~--  284 (333)
T 4dfe_A          210 V--NGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSA-EQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT--  284 (333)
T ss_dssp             E--ETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC--
T ss_pred             C--CCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh--
Confidence            0  01111222322233788999999999999999999999997 999 99999999999999999999999999875  


Q ss_pred             HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                       +++||||++||+|++|++++++    |++++|   |+|++++||+|++|++++|||
T Consensus       285 -l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~  333 (333)
T 4dfe_A          285 -VGEHGNTSAASIPLALDVAVRD----GRIKRG---QNVLIEGVGGGFTWGASVIRY  333 (333)
T ss_dssp             -HHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred             -HHhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEC
Confidence             9999999999999999999998    999999   999999999999999999998

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=100.00  E-value=1.2e-52  Score=415.46  Aligned_cols=346  Identities=24%  Similarity=0.379  Sum_probs=292.9

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.+.... .+. +. .++.+||++++||++||++.+.+.+.        ..|++.+|++
T Consensus        10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~-~~~-~~-~~~~~~i~~~~GI~~R~~~~~~~~~~--------~~~~~~~r~~   78 (382)
T 1u0m_A           10 ATLCRPSVSVPEHVITMEETLELARRRH-TDH-PQ-LPLALRLIENTGVRTRHIVQPIEDTL--------EHPGFEDRNK   78 (382)
T ss_dssp             CEECCCEEECCSEEEEHHHHHHHHHHHH-TTC-TT-HHHHHHHHHHTCCCEEEESSCHHHHT--------SCCCHHHHHH
T ss_pred             eEEEEEEEeCCCcccCHHHHHHHHHHhc-cCh-hh-HHHHHHHHHhcCCCcceeecChhhhc--------cCCChhHHHH
Confidence            6899999999999999999998764321 110 00 12457899999999999997765421        3478999999


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY-TQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i-~~~C~~~~~al~~A~  182 (402)
                      .+.+...+|+.+|+++||+++|+++++||.||+++++++..|+.+.+|+.+||+++... .+++ +++|+|++.||.+|.
T Consensus        79 ~~~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~aCss~~~Al~~A~  157 (382)
T 1u0m_A           79 VYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTR-QIPIAQLGCAAGGAAINRAH  157 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCE-EEEECSCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcc-eEEccCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999988778999999999999987432 7888 899999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI  262 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  262 (402)
                      ++|++|..++|||+++|.++..+ +|.+.+++.....++|||||+|+||++.+. .     .+++.+......+++.+.+
T Consensus       158 ~~i~~g~~~~vLv~g~e~~s~~~-~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~-~-----g~~i~~~~~~~~~~~~~~~  230 (382)
T 1u0m_A          158 DFCTAYPEANALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAVVRGRGG-T-----GVRLERNGSYLIPKTEDWI  230 (382)
T ss_dssp             HHHHHSTTCEEEEEEEEEGGGGC-CTTCCSHHHHHHHHHBCEEEEEEEEETTTC-S-----EEEEEEEEEEECSSCTTTE
T ss_pred             HHHHcCCCCEEEEEEEeccchhc-CcccCCHHHhhccchhcCCcEEEEEeccCC-C-----CcEEEEeeeEecCChHHhc
Confidence            99999999999999999998644 465543433344789999999999997653 2     2456554444456655555


Q ss_pred             cceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHh
Q 044410          263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLRE  341 (402)
Q Consensus       263 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~  341 (402)
                      .|.....++.+.+++++|+++.+.++ +++++|+++|+++ +|| +|++||+|.++++.+++.||++++|+..+++++++
T Consensus       231 ~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~-~dId~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~~  308 (382)
T 1u0m_A          231 MYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDA-SDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTE  308 (382)
T ss_dssp             EEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCS-SCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHH
T ss_pred             CceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            56555566677789999998889999 9999999999997 999 99999999999999999999999999876778999


Q ss_pred             cCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410          342 YGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       342 ~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                      ||||++||+|++|++++++    |++++|   |+|++++||+|++|++++|||.+.
T Consensus       309 ~Gnt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~vl~~~~~  357 (382)
T 1u0m_A          309 YGNIASAVVLDALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQTA  357 (382)
T ss_dssp             TCBCTTHHHHHHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEECC
T ss_pred             hCCchhhHHHHHHHHHHHh----cCCCCC---CEEEEEEEcccceeEEEEEEEeec
Confidence            9999999999999999998    889999   999999999999999999999754

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=100.00  E-value=1.3e-53  Score=412.68  Aligned_cols=307  Identities=20%  Similarity=0.261  Sum_probs=256.5

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.+.   .+         .+||.+++||++||++.+++                     
T Consensus         5 ~~I~~~g~~lP~~~v~n~~~~~~~~---~~---------~~~i~~~~Gi~~R~~a~~~e---------------------   51 (321)
T 3il6_A            5 ARISCTSRYVPENCVTNHQLSEMMD---TS---------AAWIHSRTGISERRIVTQEN---------------------   51 (321)
T ss_dssp             EEEEEEEEECCSCEEEHHHHHHHTT---SC---------HHHHHHHHSCSEEECCSSCC---------------------
T ss_pred             EEEEEEEEECCCcEEcHHHHHHHhC---CC---------hhhhhhhcCceEEEECCCCC---------------------
Confidence            8999999999999999999988642   22         37999999999999997654                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                           ..+|+.+|+++||+++|++++|||+||++++++ +..|+++.+|+.+||+++.+  +++++++|+|++.||.+|.
T Consensus        52 -----~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~aC~s~~~al~~A~  124 (321)
T 3il6_A           52 -----TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAF--AFDISAACSGFVYALSMAE  124 (321)
T ss_dssp             -----HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCE--EEEECCGGGHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCce--EEEeCcccHHHHHHHHHHH
Confidence                 789999999999999999999999999999998 88999999999999998743  8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..++|||+++|.+|. +.++.|     +.+..+|||||+|+||++.+. .++.  .+.+.+.+.    ...|..
T Consensus       125 ~~i~~g~~~~vLvvg~e~~s~-~~~~~d-----r~~~~lfGDGA~A~vl~~~~~-~~i~--~~~~~s~~~~~~~~~~~~~  195 (321)
T 3il6_A          125 KLVLSGRYQTGLVIGGETFSK-MLDWTD-----RSTAVLFGDGAAGVLIEAAET-PHFL--NEKLQADGQRWTALTSGYT  195 (321)
T ss_dssp             HHHHTSSCCCEEEEEEECGGG-GSCTTC-----TTTGGGBCCEEEEEEEEEESS-CCEE--EEEEEECGGGGGGEECCCC
T ss_pred             HHHHCCCCCEEEEEEEccccc-cCCccc-----cccceeeccccEEEEEEEcCC-CCEE--EEEEEEcCCCCCeEEeCCC
Confidence            999999999999999999997 334543     336789999999999998765 2210  122333221    223433


Q ss_pred             cccccceeec---CceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccH
Q 044410          259 ENYISGQLKE---MGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLW  333 (402)
Q Consensus       259 ~~~~~~~~~~---~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~  333 (402)
                      .....|....   .++ +.+ ++++|+++.+.++++++++|+     + +|| +|++||+|+++++.++++||+|+||++
T Consensus       196 ~~~~~~~~~~~~~~~~-~~~~g~~v~~~~~~~~~~~i~~~l~-----~-~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~  268 (321)
T 3il6_A          196 INESPFYQGHKQASKT-LQMEGRSIFDFAIKDVSQNILSLVT-----D-ETVDYLLLHQANVRIIDKIARKTKISREKFL  268 (321)
T ss_dssp             CCCSTTCCCCCCCCCS-CEECHHHHHHHHHHHHHHHHHTTCC-----G-GGCSEEEECCSCHHHHHHHHHHHTCCGGGBC
T ss_pred             CCCCCCCccccccccc-eeechHHHHHHHHHHHHHHHHHHcC-----c-ccCCEEEEcCCCHHHHHHHHHHcCcCHHHhh
Confidence            2222332211   222 344 788999999999999999998     5 889 999999999999999999999999998


Q ss_pred             HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          334 ASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       334 ~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .+   +++||||+|||+|++|++++++    |++++|. .|+|++++||+|++|++++||+
T Consensus       269 ~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G~-~d~vll~~fG~G~t~~~~~l~v  321 (321)
T 3il6_A          269 TN---MDKYGNTSAASIPILLDEAVEN----GTLILGS-QQRVVLTGFGGGLTWGSLLLTL  321 (321)
T ss_dssp             CC---GGGTCBCGGGHHHHHHHHHHHT----TSSCTTS-CCEEEEEEEETTTEEEEEEEEC
T ss_pred             hh---HhhcccHHHHHHHHHHHHHHHh----CCCCCCC-CCEEEEEEEehhheeEEEEEEC
Confidence            75   9999999999999999999998    8898871 2699999999999999999984

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=100.00  E-value=5.2e-53  Score=412.63  Aligned_cols=320  Identities=17%  Similarity=0.175  Sum_probs=258.3

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+|+.+.+.....     ......+||.+++||++||++.+++                     
T Consensus        13 v~I~~~g~~lP~~~v~n~~l~~~~~~~~~-----~~~~~~~~i~~~tGi~~R~~~~~~~---------------------   66 (345)
T 3s21_A           13 VSIAGLAHIDAPHTLTSKEINERLQPTYD-----RLGIKTDVLGDVAGIHARRLWDQDV---------------------   66 (345)
T ss_dssp             EEEEEEEEEECSEEEEHHHHHHHHHHHHH-----HHTCCCCHHHHTTCCSEEEECSSCC---------------------
T ss_pred             eEEEEEEEeCCCcEEcHHHHHHHHhhccc-----ccCCCHHHHHHhhCceeEEECCCCC---------------------
Confidence            89999999999999999999887532110     0000126999999999999997765                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|++++|||.||++++++ +..|+++.+|+.+||+++... +++++++|+|++.||.+|.
T Consensus        67 ----~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~s~~~al~~A~  141 (345)
T 3s21_A           67 ----QASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCM-TFDVANACLAFINGMDIAA  141 (345)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCE-EEECCCGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCce-EEeECCcCHHHHHHHHHHH
Confidence                3899999999999999999999999999999998 788999999999999985332 8899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCC------cc-ch---hhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPS------ET-HL---DVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ  252 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~------~~-~~---~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~  252 (402)
                      ++|++|..++|||+++|.+|..+ ++.      ++ +.   +......+|||||+|+||++.+...+    ...+.+...
T Consensus       142 ~~i~~g~~~~vLvvg~e~~s~~~-~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~----~~~i~~~~~  216 (345)
T 3s21_A          142 RMLERGEIDYALVVDGETANLVY-EKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPD----APRYKGGVT  216 (345)
T ss_dssp             HHHHHTSCSEEEEEEEECCHHHH-HHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTT----SCEEEEEEE
T ss_pred             HHHHCCCCCEEEEEEEcccchhh-ccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCCC----Ccceeeecc
Confidence            99999999999999999998532 110      10 11   11234679999999999998764111    234443322


Q ss_pred             eecCCCcccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc
Q 044410          253 TTVPDTENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE  330 (402)
Q Consensus       253 ~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e  330 (402)
                      ...+...+.+.+.  .+  .+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|+|
T Consensus       217 ~~~~~~~~~~~~~--~~--~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~lgl~~e  291 (345)
T 3s21_A          217 RSATEWNKLCRGN--LD--RMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAV-EELDQFVIHQVSRPHTAAFVKSFGIDPA  291 (345)
T ss_dssp             EECGGGTTC---------------CHHHHHHHHHHHHHHHHHHHHHHCCCG-GGCSEEEECCSCHHHHHHHHHHHTCCGG
T ss_pred             ccCcchhhhcccc--Cc--ceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCcCHH
Confidence            2222222211111  11  1333 688999999999999999999999997 999 999999999999999999999999


Q ss_pred             ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          331 KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       331 k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      |++.+   +++||||+|||+|++|++++++    |++++|   |+|++++||+|++|++++|||
T Consensus       292 k~~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~~l~w  345 (345)
T 3s21_A          292 KVMTI---FGEHGNIGPASVPIVLSKLKEL----GRLKKG---DRIALLGIGSGLNCSMAEVVW  345 (345)
T ss_dssp             GBCCC---HHHHCBCGGGHHHHHHHHHHHH----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred             Hceee---HhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhhhheEEEEEC
Confidence            99865   8999999999999999999998    999999   999999999999999999998

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=100.00  E-value=5.8e-51  Score=448.14  Aligned_cols=374  Identities=61%  Similarity=1.011  Sum_probs=312.3

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+.+++|+|+.+.+......+..+.+++..+|+.+++||++|+++.+.+....+++...+..|.+..|++
T Consensus       604 ~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~~~~~r~~  683 (979)
T 3tsy_A          604 ATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQE  683 (979)
T ss_dssp             EEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHSSSSCCHHHHHH
T ss_pred             ceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCcccccccCCCHHHHHH
Confidence            89999999999999999999998654555555566777778899999999999998877544444445667889999999


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKD  183 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~  183 (402)
                      .+.+...+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+.+||+++...++++++++|+|+++||.+|.+
T Consensus       684 ~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~  763 (979)
T 3tsy_A          684 IITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKD  763 (979)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHH
Confidence            99999999999999999999999999999999999777889999999999999987543479999999999999999999


Q ss_pred             HHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCccccc
Q 044410          184 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYIS  263 (402)
Q Consensus       184 ~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  263 (402)
                      +|++|.+++||||++|.++..+.+......+.....++|||||+|+||++.+. .+.....+.....+....+.......
T Consensus       764 ~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  842 (979)
T 3tsy_A          764 LAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPD-ISIERPLFQLVSAAQTFIPNSAGAIA  842 (979)
T ss_dssp             HHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCC-SSSCCCCEEEEEEEEEECTTCTTSEE
T ss_pred             HHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCC-ccccCcceEEEeeeeEEecCchhheE
Confidence            99999999999999999886554333333344556789999999999998765 33233345555555555565555555


Q ss_pred             ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhc
Q 044410          264 GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREY  342 (402)
Q Consensus       264 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~  342 (402)
                      +.....+..+++++++++++.+.+.++++++|+++|+++ +|| +|++||+|.++++.++++||++.+|++.+|.++++|
T Consensus       843 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~-~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~l~~~  921 (979)
T 3tsy_A          843 GNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISD-WNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEY  921 (979)
T ss_dssp             EEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHHH
T ss_pred             EEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCC-cccceEEECCCChHHHHHHHHHcCCChHHHHHHHHHHHHc
Confidence            555566666777899999999999999999999999998 999 999999999999999999999999999988889999


Q ss_pred             CCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410          343 GNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF  399 (402)
Q Consensus       343 Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~  399 (402)
                      |||+|||+|++|++++++...-++++.|.+.+++++++||+|++|++++|||.+.+.
T Consensus       922 GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~~~  978 (979)
T 3tsy_A          922 GNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPMVT  978 (979)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBCCC
T ss_pred             CCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhccccC
Confidence            999999999999998875211123445544456699999999999999999988753

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=100.00  E-value=5.8e-51  Score=399.38  Aligned_cols=318  Identities=16%  Similarity=0.119  Sum_probs=244.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+++...   +.  .         .++.+++||++||++.++|.                    
T Consensus         6 v~I~g~g~ylP~~~~~~~~~~~~---~~--~---------~~~~~~tGi~~r~~a~~~e~--------------------   51 (357)
T 3s3l_A            6 LFVSGVAAWLPPLSTAQDAVMAG---LL--D---------PARSKLRGIESVTVASDAEE--------------------   51 (357)
T ss_dssp             CEEEEEEEECCCEEEHHHHHHTT---SS--C---------HHHHHHHCCCEEECCCSSGG--------------------
T ss_pred             eEEEEEEEECCCCCCHHHHHHhc---CC--c---------HHHHHHcCceEEEecCCCCC--------------------
Confidence            79999999999987777765432   11  1         24468999999999876430                    


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLA  181 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A  181 (402)
                         .++.+|+.+|+++||+++|++++|||+||+++++.  ...++++.+|+.+||+++.+  +++++++|+|++.||.+|
T Consensus        52 ---~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~--~~~v~~aC~~~~~al~~A  126 (357)
T 3s3l_A           52 ---DAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVP--AFGLAQRCNGGMGAIELA  126 (357)
T ss_dssp             ---GSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSC--EEEEECGGGHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCc--EEEEcCccHHHHHHHHHH
Confidence               02899999999999999999999999999999852  22346799999999997654  899999999999999999


Q ss_pred             HHHHHcCCCC--eEEEEEeccCcc-ccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeee--ecC
Q 044410          182 KDIAENNPGA--RVLVVCSDIRVL-DFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQT--TVP  256 (402)
Q Consensus       182 ~~~i~~g~~~--~vLvv~~e~~s~-~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~--~~p  256 (402)
                      .++|++|..+  +||||++|++|. .+.++++     + ...+|||||+|+||++.+...++.  .+.+.+.+..  .++
T Consensus       127 ~~~i~sg~~~~~~vLvvg~e~~s~~~~~~~~~-----~-~~~lfGDGA~A~vl~~~~~~~~i~--~~~~~s~g~~~~~~~  198 (357)
T 3s3l_A          127 GAYLGSGIGAGHAALLTTGDRFAGPRIDRWNS-----V-DVTMYGDGAAALVLSTRDGFARVL--STATGVDNSLEILAR  198 (357)
T ss_dssp             HHHHHTTSSSSSEEEEEEEECCCTTTCCTTTS-----S-SSCCBCCEEEEEEEESSCCSEEEE--EEEEEECGGGGGGGT
T ss_pred             HHHHHcCCCCCCEEEEEEEecccccccccccc-----c-CCcccccccEEEEEecCCCCCeEE--EEEEEEccChhhhcc
Confidence            9999999998  999999999994 3432322     1 468999999999999876511110  1222222221  111


Q ss_pred             CCccccc------ceeecCce---EEEeCCch-hH-HHHHhHHHHHHHhhccCCCCCCcce-EEE-EcCCCHHHHHHHHH
Q 044410          257 DTENYIS------GQLKEMGT---YCHLSRDV-PV-AIGNYVDKCLSNAMSPIGISDWNSL-FYV-VHPGGDGLLDQVEK  323 (402)
Q Consensus       257 ~~~~~~~------~~~~~~g~---~~~~~~~v-~~-~~~~~~~~~i~~~L~~~gl~~~~di-~~i-~H~~~~~~~~~~~~  323 (402)
                      .......      ..+..++.   ....+.++ ++ ++.+.++++++++|+++|+++ +|| +|+ +||+|.+ ++.+++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~~hq~~~~-~~~~~~  276 (357)
T 3s3l_A          199 GDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALEDAGTAI-EDIAHAVIPVSRRGT-GHELHD  276 (357)
T ss_dssp             TTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEECCSCCCCS-SCCHHH
T ss_pred             cCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHH-HHHHHH
Confidence            1100000      00111110   00012222 44 788899999999999999997 999 998 5999999 999999


Q ss_pred             HcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCc
Q 044410          324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNF  399 (402)
Q Consensus       324 ~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~  399 (402)
                      +||+|+||++.+  +.++||||++||+|++|++++++    |++++|   |+|++++||+|++|++++|||.+.|.
T Consensus       277 ~lgl~~ek~~~~--~~~~~GNt~aAsipl~L~~~~~~----g~l~~G---d~vll~~fG~G~t~~a~ll~~~~~p~  343 (357)
T 3s3l_A          277 LLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVEN----ALVQPG---DRVLLFGGGAGYTCTAAVVEILRMPA  343 (357)
T ss_dssp             HHTSCGGGBTHH--HHHHHCBCTTCHHHHHHHHHHHT----TCCCTT---CEEEEECCBTTTEEEEEEEEECCCC-
T ss_pred             HcCCCHHHhHHH--hccccccchHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeeEEeccCCC
Confidence            999999999864  56799999999999999999998    999999   99999999999999999999999996

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=100.00  E-value=1.9e-49  Score=386.64  Aligned_cols=316  Identities=19%  Similarity=0.227  Sum_probs=261.7

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.|+|+|+|+++++|+++.+.+   ...         .+||.+++||++||++.+++                     
T Consensus        12 ~~I~gig~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~R~~~~~~~---------------------   58 (339)
T 1mzj_A           12 SRVLGVGSYRPRREVSNKEVCTWI---DST---------EEWIETRTGIRSRRIAEPDE---------------------   58 (339)
T ss_dssp             EEEEEEEEECCSCEEEHHHHTTTS---SCC---------HHHHHHHHCCSEEECCCTTC---------------------
T ss_pred             eEEEEEEEeCCCccccHHHHHHHh---CCC---------HHHHHHhcCceEEEEeCCCC---------------------
Confidence            899999999999999999998653   111         37999999999999987655                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ...+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+|+.+||+++.+  +++++++|+|++.||..|.
T Consensus        59 ----~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~~~--~~~v~~aCas~~~Al~~A~  132 (339)
T 1mzj_A           59 ----TIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG--GFDLSAACAGFCHALSIAA  132 (339)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCCcc--EEEccccchHHHHHHHHHH
Confidence                3889999999999999999999999999999988 67899999999999998643  8899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eec---
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTV---  255 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~---  255 (402)
                      ++|++|..++|||+++|.++..+ ++.+     +...++|||||+|+||++.+. .++..  ..+.+.+.    .++   
T Consensus       133 ~~i~~G~~~~vLv~g~e~~s~~~-~~~d-----~~~~~~~GdGA~A~vL~~~~~-~~i~~--~~~~~~g~~~~~~~~~g~  203 (339)
T 1mzj_A          133 DAVESGGSRHVLVVATERMTDVI-DLAD-----RSLSFLFGDGAGAAVVGPSDV-PGIGP--VVRGIDGTGLGSLHMSSS  203 (339)
T ss_dssp             HHHHHSSCSCEEEEEEEEGGGGS-CSSC-----TTTTTTBCEEEEEEEEEEESS-CCBCC--CEEEECGGGGGGEEESCC
T ss_pred             HHHHCCCCCEEEEEEEccccccc-Cccc-----cccceEeccCceEEEEEecCC-CCeEE--EEEEEcCCCCCeEEecCC
Confidence            99999999999999999988633 4432     235789999999999998654 32211  12222221    112   


Q ss_pred             -CCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-cc
Q 044410          256 -PDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-KL  332 (402)
Q Consensus       256 -p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-k~  332 (402)
                       |...+.+.   ...++....++++|+++.+.++++++++|+++|+++ +|| +|++||.|.++++.+++.||++.+ ++
T Consensus       204 ~p~~~~~~~---~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~did~v~~H~~~~~~~d~i~~~lg~~~~~~~  279 (339)
T 1mzj_A          204 WDQYVEDPS---VGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTV-GDLVAFVPHQANLRIIDVLVDRLGVPEHVVV  279 (339)
T ss_dssp             HHHHTTCSS---SCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCTTSEE
T ss_pred             CCCcccccc---cccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCcccee
Confidence             21111000   011222223788999999999999999999999997 999 999999999999999999999999 98


Q ss_pred             HHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccCccC
Q 044410          333 WASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTNFTN  401 (402)
Q Consensus       333 ~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~~~~  401 (402)
                      +.+   +.+|||+++||+|++|++++++    |++++|   |++++++||+|++|++++|||.+.|+|.
T Consensus       280 ~~~---~~~~Gn~~sAs~~~~L~~~~~~----g~~~~G---~~vll~~~G~G~t~~~~~l~~~~~p~~~  338 (339)
T 1mzj_A          280 SRD---AEDTGNTSSASVALALDRLVRS----GAVPGG---GPALMIGFGAGLSYAGQALLLPDPPSTP  338 (339)
T ss_dssp             CCT---HHHHCBCTTHHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCCCC--
T ss_pred             eeh---hhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeCCCCCCC
Confidence            765   8999999999999999999998    889999   9999999999999999999999999874

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=100.00  E-value=6.4e-48  Score=374.63  Aligned_cols=312  Identities=20%  Similarity=0.224  Sum_probs=254.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.+.   ..         .+||.+++||++||++.+ +                     
T Consensus         6 ~~I~g~g~~~P~~~~~~~~~~~~~~---~~---------~~~i~~~~Gi~~R~~~~~-~---------------------   51 (331)
T 2x3e_A            6 AVVCGLGSYLPEAVLSNDMLAAELD---TS---------DAWISSRTGVRQRHIAGD-L---------------------   51 (331)
T ss_dssp             EEEEEEEEECCSCEEEHHHHHHHTT---CC---------HHHHHHHHCCCEEECCTT-C---------------------
T ss_pred             eEEEEEEEECCCcEecHHHHHHHhC---CC---------HHHHHHhhCceEEEecCC-C---------------------
Confidence            7999999999999999999987642   11         379999999999999865 3                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ...+|+.+|+++||+++|+  ++||.||++++++ +..|+.+.+|+.+||+++.+  +++++++|+|++.||..|.
T Consensus        52 ----~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~--~~~v~~aCas~~~Al~~A~  123 (331)
T 2x3e_A           52 ----GSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVGAL--AFDLSAAATGFVYGLASVG  123 (331)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTTSE--EEEEECGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCc--EEEEcCcChHHHHHHHHHH
Confidence                2889999999999999999  8999999999988 66889999999999998643  8899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCce--EEEeeee----eecC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLF--QILSCTQ----TTVP  256 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~--~~~~~~~----~~~p  256 (402)
                      ++|++|..++|||+++|.++..+ ++.|     +...++|||||+|+||++.+. .. ....+  .+..++.    ...|
T Consensus       124 ~~i~~g~~~~vLv~g~e~~s~~~-~~~d-----~~~~~~~GdGA~A~vL~~~~~-a~-~~~i~~~~~~~dg~~~~~~~~p  195 (331)
T 2x3e_A          124 SLISAGLADSALLVGVDTFSHTL-DPAD-----RSTRALFGDGAGAVVLRAGDA-EE-EGALLAFDLGSDGHQFDLLMTP  195 (331)
T ss_dssp             HHHHTTSCSEEEEEEEECGGGGS-CTTC-----HHHHHHBCCEEEEEEEEEECT-TS-TTBEEEEEEEECGGGTTSEEEE
T ss_pred             HHHHcCCCCEEEEEEeeccccCC-Cccc-----cccceeeccccEEEEEEecCC-CC-CCceEEEEEEEcCCCCCeEEec
Confidence            99999999999999999988633 4432     335789999999999997652 11 01111  1222211    1222


Q ss_pred             CCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHH
Q 044410          257 DTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWAS  335 (402)
Q Consensus       257 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~  335 (402)
                      .............++....++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+.+.||++++|++.+
T Consensus       196 ~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~  274 (331)
T 2x3e_A          196 AVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQA-SDLHHLVPHQANTRILAAVADQLDLPVERVVSN  274 (331)
T ss_dssp             CCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHHHHTCCGGGBCCC
T ss_pred             CCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHHhhh
Confidence            2110000000011222233788999999999999999999999997 999 99999999999999999999999999865


Q ss_pred             HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          336 RYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       336 ~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                         +.+|||+++||+|++|++++++    +++++|   |++++++||+|++|++++|||.+
T Consensus       275 ---~~~~Gnt~sAs~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~~l~~~~  325 (331)
T 2x3e_A          275 ---IAEVGNTVAASIPLALAHGLRQ----GILRDG---GNMVLTGFGAGLTWGSVALRWPK  325 (331)
T ss_dssp             ---HHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred             ---HhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEeHHhhheeeEEEECC
Confidence               8999999999999999999998    889999   99999999999999999999943

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=100.00  E-value=1.6e-47  Score=369.59  Aligned_cols=309  Identities=21%  Similarity=0.297  Sum_probs=255.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.+   ...         .+|+.+++||++||++.+++                     
T Consensus         3 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~---------------------   49 (317)
T 1hnj_A            3 TKIIGTGSYLPEQVRTNADLEKMV---DTS---------DEWIVTRTGIRERHIAAPNE---------------------   49 (317)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECCTTC---------------------
T ss_pred             cEEEEEEEeCCCceecHHHHHHHh---CCC---------HHHHHHHhCceEEEecCCCC---------------------
Confidence            789999999999999999998653   111         36899999999999986654                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ...+|+.+|+++||+++|+++++||.|+++++++ +..|..+.+|+.+||+++.+  .++++++|+|++.||..|.
T Consensus        50 ----~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aCas~~~al~~A~  123 (317)
T 1hnj_A           50 ----TVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--AFDVAAACAGFTYALSVAD  123 (317)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--EEEECCGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCe--EEeeCcccHHHHHHHHHHH
Confidence                3889999999999999999999999999999988 67899999999999998543  7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..++|||+++|.++..+ +|++     +...++|||||+|+||++.+. .++.  ...+...+.    .++|..
T Consensus       124 ~~i~~g~~~~vlv~g~e~~s~~~-~~~d-----~~~~~~~GdGA~A~vL~~~~~-~~i~--~~~~~~~g~~~~~~~~~~~  194 (317)
T 1hnj_A          124 QYVKSGAVKYALVVGSDVLARTC-DPTD-----RGTIIIFGDGAGAAVLAASEE-PGII--STHLHADGSYGELLTLPNA  194 (317)
T ss_dssp             HHHHTTSCSEEEEEEEECHHHHS-CTTC-----HHHHTTBCCEEEEEEEEEESS-CSEE--EEEEEECGGGGGGEECCCC
T ss_pred             HHHHCCCCCEEEEEEechhcccC-Cchh-----cccceeeccccEEEEEEecCC-Ccee--eEEEEEcCCCCCeEEECCC
Confidence            99999999999999999988633 4432     335789999999999998654 2210  111112221    123331


Q ss_pred             cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410          259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY  337 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~  337 (402)
                       .....  +..++....++++|+++.+.++++++++|+++|+++ +|| +|++||.|.++++.+.+.||++.+++..   
T Consensus       195 -~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~-~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~---  267 (317)
T 1hnj_A          195 -DRVNP--ENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDR-SQLDWLVPHQANLRIISATAKKLGMSMDNVVV---  267 (317)
T ss_dssp             -CSSCT--TSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCEEEECCSCHHHHHHHHHHTTCCGGGBCC---
T ss_pred             -CCCCC--CCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHh---
Confidence             00000  011111223688999999999999999999999997 999 9999999999999999999999999875   


Q ss_pred             HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      ++.+|||+++||+|++|++++++    |++++|   |+|++++||+|++|++++|||
T Consensus       268 ~~~~~Gn~~~As~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~t~~~~~l~~  317 (317)
T 1hnj_A          268 TLDRHGNTSAASVPCALDEAVRD----GRIKPG---QLVLLEAFGGGFTWGSALVRF  317 (317)
T ss_dssp             CHHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred             hHhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhheeEEEEEEC
Confidence            48999999999999999999998    889999   999999999999999999997

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=100.00  E-value=1.9e-46  Score=361.38  Aligned_cols=303  Identities=23%  Similarity=0.296  Sum_probs=254.4

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.+   ...         .+|+++++||++|+++.+++                     
T Consensus         3 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~gi~~r~~~~~~~---------------------   49 (313)
T 1zow_A            3 VGIKGFGAYAPEKIIDNAYFEQFL---DTS---------DEWISKMTGIKERHWADDDQ---------------------   49 (313)
T ss_dssp             EEEEEEEEECCSCEEEGGGGGGTS---SCC---------HHHHHHHHCCSEEECCCTTC---------------------
T ss_pred             eEEEEEEEECCCccccHHHHHHhc---CCC---------HHHHHHhhCceEEEecCCCC---------------------
Confidence            799999999999999999998753   111         26899999999999987655                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ...+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+++.+||+++.+  .++++++|+|++.||..|.
T Consensus        50 ----~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aCas~~~al~~A~  123 (313)
T 1zow_A           50 ----DTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVA--SMDQLAACSGFMYSMITAK  123 (313)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCC--EEEEECGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EEEECCcCHHHHHHHHHHH
Confidence                3889999999999999999999999999999888 77899999999999998643  7889999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..++|||+++|.++..+ +|.+     +...++|||||+|+||++.+...++.  ...+.+.+.    ..+|..
T Consensus       124 ~~i~~g~~~~vLv~g~e~~s~~~-~~~d-----~~~~~~~gdGa~A~vl~~~~~~~~i~--~~~~~~~g~~~~~~~~~~~  195 (313)
T 1zow_A          124 QYVQSGDYHNILVVGADKLSKIT-DLTD-----RSTAVLFGDGAGAVIIGEVSEGRGII--SYEMGSDGTGGKHLYLDKD  195 (313)
T ss_dssp             HHHHTTSCSCEEEEEEEEGGGTC-CTTC-----HHHHTTBCEEEEEEEEEECSTTCEEE--EEEEEECGGGGGGEEECTT
T ss_pred             HHHHCCCCCEEEEEEEccccccc-Cccc-----ccceeeeccceEEEEEEecCCCCcee--EEEEEEcCCCcCeEEecCC
Confidence            99999999999999999988633 4543     23578999999999999876411100  011222111    111110


Q ss_pred             cccccceeecCceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHH
Q 044410          259 ENYISGQLKEMGTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASR  336 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~  336 (402)
                                +. .+.+ ++++|++..+.++++++++|+++|+++ +|| +|++||.+.++++.+.+.||++.++++.+ 
T Consensus       196 ----------~~-~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~-  262 (313)
T 1zow_A          196 ----------TG-KLKMNGREVFKFAVRIMGDASTRVVEKANLTS-DDIDLFIPHQANIRIMESARERLGISKDKMSVS-  262 (313)
T ss_dssp             ----------TC-CEEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC-
T ss_pred             ----------CC-eeEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHh-
Confidence                      01 1223 678888888999999999999999997 999 99999999999999999999999998864 


Q ss_pred             HHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          337 YVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       337 ~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                        +.+|||+++||++++|.+++++    +++++|   |++++++||+|++|++++|||.
T Consensus       263 --~~~~Gh~~~as~~~~L~~~~~~----~~~~~g---~~vl~~~~G~G~t~~~~~l~~~  312 (313)
T 1zow_A          263 --VNKYGNTSAASIPLSIDQELKN----GKLKDD---DTIVLVGFGGGLTWGAMTIKWG  312 (313)
T ss_dssp             --HHHHCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEECC
T ss_pred             --HhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence              8999999999999999999998    889999   9999999999999999999995

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=100.00  E-value=1.5e-46  Score=365.46  Aligned_cols=311  Identities=20%  Similarity=0.231  Sum_probs=254.4

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.+   ...         .+||.+++||++|+++.+++                     
T Consensus        13 ~~I~g~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~gi~~r~~~~~~~---------------------   59 (335)
T 1u6e_A           13 VGLLSVGAYRPERVVTNDEICQHI---DSS---------DEWIYTRTGIKTRRFAADDE---------------------   59 (335)
T ss_dssp             EEEEEEEEECCSEEEEHHHHTTSS---SCC---------HHHHHHHHCCSEEEECCTTC---------------------
T ss_pred             eEEEEEEEECCCceecHHHHHHHh---CCC---------HHHHHHhcCCceEeecCCCC---------------------
Confidence            899999999999999999998753   111         36899999999999987655                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ...+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+|+.+||+++.+  .++++++|+|++.||..|.
T Consensus        60 ----~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aC~s~~~al~~A~  133 (335)
T 1u6e_A           60 ----SAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGIL--GFDLSAGAAGFGYALGAAA  133 (335)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTSE--EEEEECGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EeeeccccHHHHHHHHHHH
Confidence                3889999999999999999999999999999988 78899999999999997544  7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..++|||+++|.++..+ +|.+     +...++|||||+|+||++.+. .++.  ...+.+.+.    ...|..
T Consensus       134 ~~i~~g~~~~vLv~g~e~~s~~~-~~~d-----~~~~~~~gDGA~A~vl~~~~~-~~i~--~~~~~~~g~~~~~~~~~~~  204 (335)
T 1u6e_A          134 DMIRGGGAATMLVVGTEKLSPTI-DMYD-----RGNCFIFADGAAAVVVGETPF-QGIG--PTVAGSDGEQADAIRQDID  204 (335)
T ss_dssp             HHHHHTSCSSEEEEEEEECGGGC-CTTC-----TTTTTTBCEEEEEEEEEECSS-CCBC--CCEEEECGGGGGGEEESSC
T ss_pred             HHHHcCCCCEEEEEEEccccccc-Cccc-----cccceEeccccEEEEEEecCC-CCee--EEEEEEcCCcccceeecCC
Confidence            99999999999999999998633 4533     235789999999999998754 2211  111222111    111211


Q ss_pred             cccccceeecC--ceEEEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCcc-ccH
Q 044410          259 ENYISGQLKEM--GTYCHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKE-KLW  333 (402)
Q Consensus       259 ~~~~~~~~~~~--g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~e-k~~  333 (402)
                      .  ..+...+.  ...+.+ ++++|++..+.+.++++++|+++|+++ +|| +|++||.+..+++.+.+.||++++ ++.
T Consensus       205 ~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~dId~~~~H~~~~~~~~~~~~~lg~~~~~~~~  281 (335)
T 1u6e_A          205 W--ITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRP-DQIDVFVPHQANSRINELLVKNLQLRPDAVVA  281 (335)
T ss_dssp             H--HHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCCEEEECCSCHHHHHHHHHHHTCCTTCEEC
T ss_pred             c--cCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCchhhhh
Confidence            0  00000000  012333 567888888899999999999999997 999 999999999999999999999998 776


Q ss_pred             HHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeee
Q 044410          334 ASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       334 ~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      .+   +++|||+++|++|++|++++++    +++++|   |++|+++||+|++|++++|||.
T Consensus       282 ~~---~~~~Gnt~sAs~~~~L~~~~~~----~~~~~g---~~~l~~~~G~G~t~~~~vl~~~  333 (335)
T 1u6e_A          282 ND---IEHTGNTSAASIPLAMAELLTT----GAAKPG---DLALLIGYGAGLSYAAQVVRMP  333 (335)
T ss_dssp             CT---HHHHCBCGGGHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECC
T ss_pred             hh---hhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEeC
Confidence            64   8999999999999999999987    888999   9999999999999999999994

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=100.00  E-value=2.1e-47  Score=377.19  Aligned_cols=303  Identities=16%  Similarity=0.144  Sum_probs=249.5

Q ss_pred             cEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHH
Q 044410           23 TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQ  102 (402)
Q Consensus        23 ~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (402)
                      .++|.++|+|+|+++++|+++++.++   ..+         +|+.+.+||++|+++.+++                    
T Consensus         7 ~v~I~~~g~y~P~~~v~~~~l~~~~g---~~~---------~~~~~~~Gi~~r~~~~~~e--------------------   54 (388)
T 3v4n_A            7 TIGIDKISFFVPPYYIDMTALAEARN---VDP---------GKFHIGIGQDQMAVNPISQ--------------------   54 (388)
T ss_dssp             CEEEEEEEEECCSEEEEHHHHHHHTT---SCT---------HHHHTTTCCCEEECCCTTC--------------------
T ss_pred             eEEEEEEEEECCCeEEcHHHHHHHhC---CCH---------HHHHHHhCceEEEECCCCC--------------------
Confidence            38999999999999999999988742   222         6888999999999997766                    


Q ss_pred             HHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 044410          103 AMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLA  181 (402)
Q Consensus       103 ~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A  181 (402)
                           +..+|+++|+++||+++|  ++|||+||++|+++ +..|+.+.+|+++||+++... +++++++|+|++.||.+|
T Consensus        55 -----~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~-~~dv~~aC~gg~~AL~~A  126 (388)
T 3v4n_A           55 -----DIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFAR-SFEIKEAXYGATAGLQLA  126 (388)
T ss_dssp             -----CHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESGGGHHHHHHHHH
T ss_pred             -----CHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCce-EeehhhhhhHHHHHHHHH
Confidence                 389999999999999997  89999999999999 779999999999999987443 899999999999999999


Q ss_pred             HHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEE--eeeeeecCCCc
Q 044410          182 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQIL--SCTQTTVPDTE  259 (402)
Q Consensus       182 ~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~--~~~~~~~p~~~  259 (402)
                      .++|++|+.++||||++|+++..+ ++.        ...+|||||+|+||++++.       .+.+.  ..+.     ..
T Consensus       127 ~~~i~sg~~~~vLVvg~e~~s~~~-~~~--------~~~lfGDGA~A~ll~~~~~-------il~~~~~~~~~-----~~  185 (388)
T 3v4n_A          127 KNHVALHPDKKVLVVAADIAKYGL-NSG--------GEPTQGAGAVAMLVSSEPR-------ILALKEDNVML-----TQ  185 (388)
T ss_dssp             HHHHHHCTTCEEEEEEEEEECCCT-TCT--------TGGGCEEEEEEEEEEESCS-------SEEECSCCEEE-----EC
T ss_pred             HHHHhcCCCCEEEEEEehhhcccC-CCC--------CCCccccceeEEEeecCCC-------ceEEecccccc-----ch
Confidence            999999999999999999999643 322        1478999999999998764       12221  1111     11


Q ss_pred             cccc-ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCC--------HHHH----HHHHHHc
Q 044410          260 NYIS-GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGG--------DGLL----DQVEKTL  325 (402)
Q Consensus       260 ~~~~-~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~--------~~~~----~~~~~~l  325 (402)
                      +.+. |......+....++.+++.+.+.++++++++|+++|+++ +|| +|++||++        ++++    +.+.++|
T Consensus       186 ~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~-~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l  264 (388)
T 3v4n_A          186 DIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDF-ADYDALAFHIPYTKMGKKALLAKISDQTEAEQERI  264 (388)
T ss_dssp             CCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCG-GGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHH
T ss_pred             hccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCH-HHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHh
Confidence            1111 111111122334678899999999999999999999997 999 99999944        5556    7788999


Q ss_pred             CCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          326 GLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       326 gi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      +++.+++..   ++++||||++||+|++|++++++.   |++++|   |+|++++||+|+++....+++.+
T Consensus       265 ~~~~e~~~~---~~~~~GN~~sASi~l~L~~~l~~~---g~~~~G---d~ill~s~GsG~~ae~~~~~v~~  326 (388)
T 3v4n_A          265 LARYEESII---YSRRVGNLYTGSLYLGLISLLENA---TTLTAG---NQIGLFSYGSGAVAEFFTGELVA  326 (388)
T ss_dssp             HHHHHHHTT---TGGGTCCCGGGHHHHHHHHHHHHC---SSCCTT---CEEEEEEEETTTEEEEEEEEECT
T ss_pred             CCCHHHHhh---HHHhcCchHHHHHHHHHHHHHHhc---CcCCCC---CEEEEEEecCcceeEEEEEEEcc
Confidence            999999876   499999999999999999999851   568999   99999999999999999998864

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=100.00  E-value=7.5e-46  Score=358.63  Aligned_cols=314  Identities=20%  Similarity=0.258  Sum_probs=255.0

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.+   ...         .+|+.+++||++||++.+++                     
T Consensus         2 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~---------------------   48 (322)
T 1ub7_A            2 SGILALGAYVPERVMTNADFEAYL---DTS---------DEWIVTRTGIKERRVAAEDE---------------------   48 (322)
T ss_dssp             CEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEEECCTTC---------------------
T ss_pred             cEEEEEEEECCCceecHHHHHHHh---CCC---------HHHHHHhcCceEEeecCCCC---------------------
Confidence            589999999999999999998653   111         37999999999999987655                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ...+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+|+.+||+ ..+  .++++++|+|++.||..|.
T Consensus        49 ----~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~--~~~v~~aCas~~~al~~A~  121 (322)
T 1ub7_A           49 ----YTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAF--AYDLLAGCPGWIYALAQAH  121 (322)
T ss_dssp             ----CHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCE--EEEEECSTTHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCE--EEeeCccchHHHHHHHHHH
Confidence                3889999999999999999999999999999988 6688999999999999 444  7899999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeee----eecCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQ----TTVPDT  258 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~----~~~p~~  258 (402)
                      ++|++|..++|||+++|.++..+ +|.+     +...++|||||+|+||++.+...++.  ...+.+.+.    .++|..
T Consensus       122 ~~i~~g~~~~vlv~g~e~~s~~~-~~~d-----~~~~~~~GdGA~A~vL~~~~~~~~i~--~~~~~~~g~~~~~~~~~~~  193 (322)
T 1ub7_A          122 ALVEAGLAQKVLAVGAEALSKII-DWND-----RATAVLFGDGGGAAVVGKVREGYGFR--SFVLGADGTGAKELYHACV  193 (322)
T ss_dssp             HHHHTTSCSEEEEEEEECGGGTS-CTTC-----HHHHTTBCCEEEEEEEECCCTTCEEE--EEEEEECGGGCTTEEEESS
T ss_pred             HHHHcCCCCEEEEEEechhcccc-Chhh-----cccceeeccccEEEEEEecCCCCcee--EEEEEEecCCCCeEEeCCC
Confidence            99999999999999999988633 4432     33578999999999999875411110  011122211    122211


Q ss_pred             cccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 044410          259 ENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRY  337 (402)
Q Consensus       259 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~  337 (402)
                      ............+....++++|+++.+.++++++++|+++|+++ +|| +|++||.|.++++.+.+.||++.++++.+  
T Consensus       194 ~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~--  270 (322)
T 1ub7_A          194 APRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTP-EDIRLFVPHQANLRIIDAARERLGLPWERVAVN--  270 (322)
T ss_dssp             CSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC--
T ss_pred             CCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHHH--
Confidence            10000000011122223688999999999999999999999997 999 99999999999999999999999998754  


Q ss_pred             HHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          338 VLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       338 ~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                       +.+|||+++||++++|.+++++    |++++|   +++++.+||.|++|++++|||++
T Consensus       271 -~~~~Gh~~~As~~~~l~~~l~~----g~~~~g---~~~l~~~~G~G~~~~~~vl~~~~  321 (322)
T 1ub7_A          271 -VDRYGNTSTASIPLALKEAVDA----GRIREG---DHVLLVSFGAGLTWAAAVLTWGG  321 (322)
T ss_dssp             -HHHHCBCGGGHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred             -HHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEChhheeEEEEEEeCC
Confidence             8999999999999999999988    889999   99999999999999999999964

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=100.00  E-value=3.5e-45  Score=351.79  Aligned_cols=305  Identities=20%  Similarity=0.291  Sum_probs=251.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+.+   ...         .+|+.+++||++||++.+ +                     
T Consensus         3 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~-~---------------------   48 (309)
T 2ebd_A            3 TKIIGTGVYLPKNVLTNFDLEKIV---DTS---------DEWITTRTGIKERRIAKE-E---------------------   48 (309)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECSS-C---------------------
T ss_pred             eEEEEEEEECCCceEcHHHHHHHc---CCC---------HHHHHHHhCceeeeecCC-C---------------------
Confidence            799999999999999999998653   111         368999999999999865 3                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ...+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+|+.+||+++.+  .++++++|++++.||..|.
T Consensus        49 ----~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~~C~s~~~al~~A~  122 (309)
T 2ebd_A           49 ----TITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVY--AFDISAACSGFIYALDIAD  122 (309)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCce--EEecCccchHHHHHHHHHH
Confidence                2889999999999999999999999999999988 67899999999999998743  7889999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI  262 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  262 (402)
                      ++|++|..++|||+++|.++..+ +|.+     +...++|||||+|+||++.+. ..      .+............+.+
T Consensus       123 ~~i~~g~~~~vlv~g~e~~s~~~-~~~~-----~~~~~~~gdGaaA~vL~~~~~-~~------~i~~~~~~~~g~~~~~~  189 (309)
T 2ebd_A          123 SFIKSGKAKNVLVIGAEKLSEAV-DWED-----RSTCVLFGDGAGAVVVTRSED-KS------DILATRMYAEGSLEELL  189 (309)
T ss_dssp             HHHHTTSCSEEEEEEEEEGGGTC-CTTC-----TTTTTTBCEEEEEEEEEECSS-SC------EEEEEEEEECGGGGGGE
T ss_pred             HHHHCCCCCEEEEEEeccccccc-Cccc-----hhhccccccccEEEEEEecCC-CC------ceeEEEEEecCCcccee
Confidence            99999999999999999998633 4432     234689999999999998765 21      12111100000000111


Q ss_pred             cceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHh
Q 044410          263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLRE  341 (402)
Q Consensus       263 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~  341 (402)
                        .....++....++++++.+.+.+.++++++|+++|+++ +|| +|++|+.+.++++.+.+.||+++++++.+   +.+
T Consensus       190 --~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~~~~~~~lg~~~~~~~~~---~~~  263 (309)
T 2ebd_A          190 --HADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKP-EEVSLVIPHQANVRIINALAEKLNIPKEKVFVN---IQK  263 (309)
T ss_dssp             --EECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC---HHH
T ss_pred             --EeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh---Hhh
Confidence              11111111222677888888899999999999999997 999 99999999999999999999999998764   899


Q ss_pred             cCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          342 YGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       342 ~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +||+++||++++|.+++++    |++++|   |++++++||+|++|++++|||
T Consensus       264 ~Gh~~~As~~~~L~~~~~~----g~~~~G---~~~l~~~~G~G~~~~~~~l~~  309 (309)
T 2ebd_A          264 YGNTSAASIPIALHEAIKE----GKVKRG---DLILMTAMGGGLTWGAVLLRY  309 (309)
T ss_dssp             HCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred             hcchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEC
Confidence            9999999999999999998    889999   999999999999999999997

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=100.00  E-value=2.9e-45  Score=363.90  Aligned_cols=305  Identities=18%  Similarity=0.167  Sum_probs=247.9

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++.+..+   .+         .+|+.+++||++|+++.+++                     
T Consensus         3 v~I~~ig~y~P~~~v~~~~l~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~e---------------------   49 (396)
T 1xpm_A            3 IGIDKINFYVPKYYVDMAKLAEARQ---VD---------PNKFLIGIGQTEMAVSPVNQ---------------------   49 (396)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHHHTT---SC---------HHHHHTTTCCSEEEECCTTC---------------------
T ss_pred             eEEEEEEEeCCCeEecHHHHHHHhC---CC---------HHHHhhhcCceEEEeCCCCC---------------------
Confidence            7999999999999999999987642   11         36899999999999997665                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ...+|+..|+++||++  +++++||.||++|+++ +..|+++.+|+.+||+++... +++++++|+|++.||..|.
T Consensus        50 ----~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~sg~~Al~~A~  122 (396)
T 1xpm_A           50 ----DIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFAR-CFEMKEACYAATPAIQLAK  122 (396)
T ss_dssp             ----CHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESTTTTHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCce-EEEeccccHHHHHHHHHHH
Confidence                3899999999999988  6899999999999998 688999999999999986433 8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEe-eeeeecCCCccc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILS-CTQTTVPDTENY  261 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~  261 (402)
                      ++|++|+.++||||++|..+..+ +  +      ...++|||||+|+||++++.       .+.+.. .+..    +.+.
T Consensus       123 ~~I~sg~~~~vLvvg~e~s~~~~-~--~------~~~~~~GdGA~A~vl~~~~~-------i~~~~~~~g~~----~~d~  182 (396)
T 1xpm_A          123 DYLATRPNEKVLVIATDTARYGL-N--S------GGEPTQGAGAVAMVIAHNPS-------ILALNEDAVAY----TEDV  182 (396)
T ss_dssp             HHHTTCTTCEEEEEEEEEECCCT-T--C------SSGGGCEEEEEEEEEEESCS-------SEEECSCCEEE----ECCC
T ss_pred             HHHHcCCCCEEEEEeehhhcccc-C--C------CCCcccccceEEEEeccCCc-------eEEEEeccccc----cceE
Confidence            99999999999999999843212 1  1      13689999999999998643       122211 1111    0000


Q ss_pred             cc-ceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHc-----CCCccccHH
Q 044410          262 IS-GQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTL-----GLRKEKLWA  334 (402)
Q Consensus       262 ~~-~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~l-----gi~~ek~~~  334 (402)
                      +. |.....+.....++.+++++.+.++++++++|+++|+++ +|| +|++||+|.++++.+.++|     +++++++..
T Consensus       183 ~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~-~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~  261 (396)
T 1xpm_A          183 YDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSL-ADFASLCFHVPFTKMGKKALESIIDNADETTQERLRS  261 (396)
T ss_dssp             CSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHH
T ss_pred             EEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHHHH
Confidence            00 111111111122677888999999999999999999997 999 9999999999999999998     899988865


Q ss_pred             H----HHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          335 S----RYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       335 ~----~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      +    |.++++||||++||+|++|++++++    +++++|   |+|++++||+|++++++++++.+
T Consensus       262 ~~~~s~~~~~~~GN~~saSi~l~L~~~l~~----~~l~~G---d~ill~s~GsG~~~~~~~~~v~~  320 (396)
T 1xpm_A          262 GYEDAVDYNRYVGNIYTGSLYLSLISLLEN----RDLQAG---ETIGLFSYGSGSVGEFYSATLVE  320 (396)
T ss_dssp             HHHHHTTGGGGTCCCGGGHHHHHHHHHHHH----SCCCTT---CEEEEEEEETTTEEEEEEEEECT
T ss_pred             HhhhhhhhhhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEECcchhheEEEEEEcc
Confidence            3    1113999999999999999999998    889999   99999999999999999999974

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=100.00  E-value=9.4e-44  Score=358.18  Aligned_cols=308  Identities=19%  Similarity=0.195  Sum_probs=246.0

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++++..+   .++         +|+...+|+.+|+++.+++                     
T Consensus         4 v~I~~ig~y~P~~~v~~~~l~~~~g---~~~---------~~~~~g~G~~~~~~~~~~e---------------------   50 (450)
T 2f82_A            4 VGILAMDIYFPPTCVQQEALEAHDG---ASK---------GKYTIGLGQDCLAFCTELE---------------------   50 (450)
T ss_dssp             CEEEEEEEECCSEEEEHHHHHHHTT---CCT---------TTTTTTSCCCEEECCCTTC---------------------
T ss_pred             eEEEEEEEECCCeeccHHHHHHHhC---CCH---------HHhhhhhCceeeeeCCCCC---------------------
Confidence            7999999999999999999988642   222         5777888999999876655                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCC--CCccccceeeccccchHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGL--KPSVNRLMIYTQGCYMGGTVIRL  180 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl--~~~~~~~~~i~~~C~~~~~al~~  180 (402)
                          ++.+|+++|+++||+++|+++++||+||++|+++ +..|+++.+|+..||+  +... ++++++++|+|++.||.+
T Consensus        51 ----~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~-~~~~v~~aC~gg~~AL~~  125 (450)
T 2f82_A           51 ----DVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDV-EGVDSTNACYGGTAALLN  125 (450)
T ss_dssp             ----CHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCC-BCCEECSGGGHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCc-eEEEhhhhhHHHHHHHHH
Confidence                3899999999999999999999999999999998 7799999999999999  3333 389999999999999999


Q ss_pred             HHHHHHcCCC--CeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCC
Q 044410          181 AKDIAENNPG--ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDT  258 (402)
Q Consensus       181 A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~  258 (402)
                      |.++|++|+.  ++||||++|.++  +.   +  +   ....+|||||+|+||++++. .     .+.....+... ...
T Consensus       126 A~~~I~sg~~~~~~vLVvg~e~~~--~~---~--~---~~~~~fGDGA~A~ll~~~~~-~-----~~~~~~~g~~~-~~~  188 (450)
T 2f82_A          126 CVNWVESNSWDGRYGLVICTDSAV--YA---E--G---PARPTGGAAAIAMLIGPDAP-I-----VFESKLRGSHM-AHV  188 (450)
T ss_dssp             HHHHHHSTTCCSCEEEEEEEEEEC--CS---S--S---TTGGGCEEEEEEEEEESSCS-E-----EEEEEEEEEEE-CCC
T ss_pred             HHHHHHcCCCcCCeEEEEEeeecc--cc---C--C---CCCcccccceEEEEeccCCc-e-----EEEeccceeeh-hhc
Confidence            9999999986  999999999986  21   1  1   14679999999999987653 1     12221111110 000


Q ss_pred             cccccceeecCc--eEEEeCCchhHHHHHhHHHHHHHhhc------cCCCCCCcce-EEEEcCCCHHHHHHHHHHcC---
Q 044410          259 ENYISGQLKEMG--TYCHLSRDVPVAIGNYVDKCLSNAMS------PIGISDWNSL-FYVVHPGGDGLLDQVEKTLG---  326 (402)
Q Consensus       259 ~~~~~~~~~~~g--~~~~~~~~v~~~~~~~~~~~i~~~L~------~~gl~~~~di-~~i~H~~~~~~~~~~~~~lg---  326 (402)
                         +.+.....+  +....++.++..+.+.++.+++.+|+      ++|+++ +|| +|++||+|.++++.+.++|+   
T Consensus       189 ---~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~-~did~~v~Hq~~~~i~~~~~~~L~~~~  264 (450)
T 2f82_A          189 ---YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSI-NDADYFVFHSPYNKLVQKSFARLLYND  264 (450)
T ss_dssp             ---CSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCG-GGCSEEEECCSSHHHHHHHHHHHHHHH
T ss_pred             ---cceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCCh-hhcCEEEecCChHHHHHHHHHHhcccc
Confidence               011100001  11223567788888889999999996      899997 999 99999999999999999998   


Q ss_pred             ---------------CCc---------------cccHH-------------HHHHHHhcCCCCcchHHHHHHHHHHhhhh
Q 044410          327 ---------------LRK---------------EKLWA-------------SRYVLREYGNMGAPSVFFILDEVRKKSIE  363 (402)
Q Consensus       327 ---------------i~~---------------ek~~~-------------~~~~l~~~Gn~~sasi~i~L~~~~~~~~~  363 (402)
                                     +++               ||++.             ++.++++||||++||+|++|++++++   
T Consensus       265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~l~L~~~l~~---  341 (450)
T 2f82_A          265 FLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHN---  341 (450)
T ss_dssp             HHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHHHHCCCGGGHHHHHHHHHHHH---
T ss_pred             cccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHh---
Confidence                           455               55443             22457899999999999999999997   


Q ss_pred             hhc-ccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410          364 EMK-ATTGEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       364 ~g~-i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                       ++ +++|   |+|++++||+|++|++++++|.+.
T Consensus       342 -~~~~~~G---d~ill~s~GsG~~~~~~~l~~~~~  372 (450)
T 2f82_A          342 -KHSDLAG---KRVVMFSYGSGSTATMFSLRLCEN  372 (450)
T ss_dssp             -HGGGCTT---CEEEEEEEETTTEEEEEEEEECCC
T ss_pred             -CccCCCC---CEEEEEeecCCcccEEEEEEEeCC
Confidence             74 8889   999999999999999999999764

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.9e-43  Score=356.07  Aligned_cols=306  Identities=19%  Similarity=0.132  Sum_probs=237.7

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      ++|.++|+|+|+++++|+++++..+   .++         +|+...+||++|+++.+++                     
T Consensus        25 vgI~aig~y~P~~~v~~~el~~~~g---~~~---------~~~~~~~Gi~~r~~~~~~e---------------------   71 (478)
T 2p8u_A           25 VGIVALEIYFPSQYVDQAELEKYDG---VDA---------GKYTIGLGQAKMGFCTDRE---------------------   71 (478)
T ss_dssp             CEEEEEEEECCSEEEEHHHHHHHHT---CCT---------TCCCCCCCCCEEECCCTTC---------------------
T ss_pred             eEEEEEEEECCCeEecHHHHHHHhC---CCh---------hHhecccCceEEEeCCCCC---------------------
Confidence            8999999999999999999998753   222         5788899999999987665                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHH---HcCCCCccccceeeccccchHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMR---LLGLKPSVNRLMIYTQGCYMGGTVIR  179 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~---~LGl~~~~~~~~~i~~~C~~~~~al~  179 (402)
                          +..+|+++|+++||+++|++++|||+||++|+++ +..|+++.+|++   .+|++...  +++++++|+|++.||+
T Consensus        72 ----~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~--~~dv~~aC~gg~~AL~  145 (478)
T 2p8u_A           72 ----DINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIE--GIDTTNACYGGTAAVF  145 (478)
T ss_dssp             ----CHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCB--CCEEESGGGHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCce--EEEEcchhHHHHHHHH
Confidence                3899999999999999999999999999999998 789999999995   45555543  8999999999999999


Q ss_pred             HHHHHHHcCC--CCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCce--EEEe-eeeee
Q 044410          180 LAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLF--QILS-CTQTT  254 (402)
Q Consensus       180 ~A~~~i~~g~--~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~--~~~~-~~~~~  254 (402)
                      +|.++|++|+  .++||||++|...  +.+        .....+|||||+|+||++++. . .....+  .... .....
T Consensus       146 ~A~~~i~sg~~~~~~aLVV~~Eia~--~~~--------~~~~~~fGdGA~A~Ll~~~~~-~-~l~~~~~gs~~~~~~d~~  213 (478)
T 2p8u_A          146 NAVNWIESSSWDGRYALVVAGDIAV--YAT--------GNARPTGGVGAVALLIGPNAP-L-IFERGLRGTHMQHAYDFY  213 (478)
T ss_dssp             HHHHHHTSTTCCSCEEEEEEEEEEC--CCS--------STTGGGCEEEEEEEEEESSCS-E-EECTTCCEEEECCCCSEE
T ss_pred             HHHHHHHcCCccCCEEEEEEeeeec--ccC--------CCCCCcccceeEEEEEecCCC-c-eEeeccceecccchhhee
Confidence            9999999998  8999999999642  321        114689999999999997654 1 000000  0000 00011


Q ss_pred             cCCCcccccceeecCceEEEeCCchhH---HHHHhHHHHHHHhhc--------cCCCCCCcce-EEEEcCCCHHHHHHHH
Q 044410          255 VPDTENYISGQLKEMGTYCHLSRDVPV---AIGNYVDKCLSNAMS--------PIGISDWNSL-FYVVHPGGDGLLDQVE  322 (402)
Q Consensus       255 ~p~~~~~~~~~~~~~g~~~~~~~~v~~---~~~~~~~~~i~~~L~--------~~gl~~~~di-~~i~H~~~~~~~~~~~  322 (402)
                      .|.....         +....++.++.   .....+.+.+++.++        ++|+++ +|+ +|++||+|.++++.+.
T Consensus       214 ~p~~~~~---------~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~-~did~~v~H~~~~ki~~~~~  283 (478)
T 2p8u_A          214 KPDMLSE---------YPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTL-NDFGFMIFHSPYCKLVQKSL  283 (478)
T ss_dssp             CCCTTCS---------SCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCG-GGCSEEEECCSSHHHHHHHH
T ss_pred             eecCCCc---------ceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCCCh-HHcCEEEecCCcHHHHHHHH
Confidence            2221100         01112344444   344455566677776        789997 999 9999999999999999


Q ss_pred             HHcC------------------------CCc---------c-------------ccHHHHHHHHhcCCCCcchHHHHHHH
Q 044410          323 KTLG------------------------LRK---------E-------------KLWASRYVLREYGNMGAPSVFFILDE  356 (402)
Q Consensus       323 ~~lg------------------------i~~---------e-------------k~~~~~~~l~~~Gn~~sasi~i~L~~  356 (402)
                      ++|+                        ++.         |             |+..++.++++||||++||+|++|++
T Consensus       284 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSi~l~L~~  363 (478)
T 2p8u_A          284 ARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLAS  363 (478)
T ss_dssp             HHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTGGGHHHHHHCCCGGGHHHHHHHH
T ss_pred             HHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHHHHHHHHhcCchHHHHHHHHHHH
Confidence            9998                        676         5             43224456899999999999999999


Q ss_pred             HHHhhhhhhc--ccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410          357 VRKKSIEEMK--ATTGEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       357 ~~~~~~~~g~--i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                      ++++    ++  +++|   |+|++++||+|++|++++++|.+.
T Consensus       364 ll~~----~~~~~~~G---drill~s~GsG~~~~~~~l~~~~~  399 (478)
T 2p8u_A          364 VLAQ----YSPQQLAG---KRIGVFSYGSGLAATLYSLKVTQD  399 (478)
T ss_dssp             HHHH----SCHHHHTT---CEEEEEEEETTTEEEEEEEEECSC
T ss_pred             HHHh----CCccCCCC---CEEEEEEEcchhhhEEEEEEEeCC
Confidence            9987    76  7889   999999999999999999999765

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.8e-43  Score=354.10  Aligned_cols=313  Identities=16%  Similarity=0.133  Sum_probs=238.4

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      |+|.++|.|+|+++++|+||++..   ..++         +||.+++||++|+++.++|                     
T Consensus         6 VgI~~~g~y~P~~~v~~~~l~~~~---~~~~---------~~i~~~~Gi~~r~~~~~~E---------------------   52 (460)
T 2wya_A            6 VGILALEVYFPAQYVDQTDLEKYN---NVEA---------GKYTVGLGQTRMGFCSVQE---------------------   52 (460)
T ss_dssp             CEEEEEEEECCSEEEEHHHHHHHT---TCCT---------TCCCCCCCCCEEECCCTTC---------------------
T ss_pred             eEEEEEEEECCCeEEcHHHHHHHh---CCCH---------HHHHHhhCcEEEEECCCCC---------------------
Confidence            899999999999999999998764   2232         6899999999999998877                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCcc-ccceeeccccchHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSV-NRLMIYTQGCYMGGTVIRLA  181 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~-~~~~~i~~~C~~~~~al~~A  181 (402)
                          ++.+||++|+++||+++|++|+|||+||++|+|+ +..|++++.|++.||+...+ ..++|++++|+||++||.+|
T Consensus        53 ----~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A  128 (460)
T 2wya_A           53 ----DINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNA  128 (460)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHH
Confidence                3899999999999999999999999999999999 89999999999999764221 12799999999999999999


Q ss_pred             HHHHHcCCCCeEEEE--EeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEe-eee-eecCC
Q 044410          182 KDIAENNPGARVLVV--CSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILS-CTQ-TTVPD  257 (402)
Q Consensus       182 ~~~i~~g~~~~vLvv--~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~-~~~-~~~p~  257 (402)
                      .++|++|+.+++++|  .++...  +.+        +....+|||||+|++++.++. ............ ... ...|.
T Consensus       129 ~~~i~~g~~~~~lvvv~~s~~~~--~~d--------~~~~~~~GdGA~A~l~~~~~~-~~~~~~~~~~~~~~~~df~~p~  197 (460)
T 2wya_A          129 ANWMESSSWDGRYAMVVCGDIAV--YPS--------GNARPTGGAGAVAMLIGPKAP-LALERGLRGTHMENVYDFYKPN  197 (460)
T ss_dssp             HHHHTSTTCCSCEEEEEEEEEEC--CCS--------STTGGGCEEEEEEEEEESSCS-EEECTTCCEEEECCCCSEECCC
T ss_pred             HHHHHhccccceEEEEEeccccc--ccc--------ccccccCcchHHhhhcccCCc-ceeecccccccccchhhhhccC
Confidence            999999986554443  444322  321        124678999999999998765 211100111111 001 11222


Q ss_pred             CcccccceeecCce----EE-EeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCC----
Q 044410          258 TENYISGQLKEMGT----YC-HLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGL----  327 (402)
Q Consensus       258 ~~~~~~~~~~~~g~----~~-~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi----  327 (402)
                      ......   ..+|.    .+ +.++++|+++.+.+++.++++|+++|++. +|+ ++++||++.++++...++|++    
T Consensus       198 ~~s~~~---~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~-~d~d~~v~Hqp~~r~~~k~~~rL~~~~~~  273 (460)
T 2wya_A          198 LASEYP---IVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTL-DDLQYMIFHTPFCKMVQKSLARLMFNDFL  273 (460)
T ss_dssp             TTCSCC---EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCG-GGCSEEEECCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCc---ccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHhhhhhcccchHHHHHHHHHhcchhhh
Confidence            111000   01110    11 12678899999999999999999999997 999 999999999998877766643    


Q ss_pred             ---------------------------------------------CccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhh
Q 044410          328 ---------------------------------------------RKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSI  362 (402)
Q Consensus       328 ---------------------------------------------~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~  362 (402)
                                                                   +.++...   ++++||||++||+|++|++++++..
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~~---~~~~~GNt~sASiplaL~~ll~~~~  350 (460)
T 2wya_A          274 SASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLY---LSTHNGNMYTSSLYGCLASLLSHHS  350 (460)
T ss_dssp             HSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTGGGGH---HHHHHCCCGGGHHHHHHHHHHHHSC
T ss_pred             hcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchhhhhh---HHHhhCCcchhhHHHHHHHHHHhcc
Confidence                                                         2234443   4889999999999999999997422


Q ss_pred             hhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          363 EEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       363 ~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                        +++++|   |+|+|+|||+|+++..+-+++.+
T Consensus       351 --~~~~~G---drIll~~fGSGl~s~~fs~~v~~  379 (460)
T 2wya_A          351 --AQELAG---SRIGAFSYGSGLAASFFSFRVSQ  379 (460)
T ss_dssp             --HHHHTT---CEEEEEEEETTTEEEEEEEEECS
T ss_pred             --ccCCCC---CEEEEEEecCCccceEEEEEEeC
Confidence              678899   99999999999999999888753

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=99.95  E-value=2.9e-27  Score=225.42  Aligned_cols=245  Identities=13%  Similarity=0.139  Sum_probs=170.4

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      ...+|+.+|+++||+++|++++|||+||+++.+++..  .+..++++||++     +++++++|+|+++||.+|.++|++
T Consensus        54 a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~--~A~~va~~Lgip-----afdV~~ACsg~~~AL~~Aa~~I~s  126 (347)
T 3lma_A           54 AERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNV--TANYVARHLKIP-----FLCLFGACSTSMESIAISSALIDG  126 (347)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSST--THHHHHHHHCCC-----EEEBCCSTTHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCchh--HHHHHHHHhCCC-----EEEecChhHHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999988433  789999999654     789999999999999999999999


Q ss_pred             CCCCeEEEEEeccCcc---ccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccc
Q 044410          188 NPGARVLVVCSDIRVL---DFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISG  264 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~---~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  264 (402)
                      |.+++||||++|++|.   .|+.|.+.......+..+++|||+|+||++.+.  +   +.+.-...+..        ..+
T Consensus       127 G~~~~VLVVGaE~~S~aerq~r~p~e~g~q~p~ta~~t~dGAGA~VL~~~g~--~---p~I~~~t~Gkv--------vd~  193 (347)
T 3lma_A          127 GFAKRALAATSSHNATAERQFRYPTEYGGQKPGTATSTVTGSGAVVLSQQPG--G---IKITSATVGRV--------IDL  193 (347)
T ss_dssp             TSCSEEEEEEEECGGGTTCCC----------------CCCEEEEEEEESSCC--S---EEEEEEECCCC--------BCC
T ss_pred             CCCCEEEEEEeccccchhhhccCcchhcccCCchhcEEccceeEEEEEecCC--C---Cceeeeeeeee--------ecc
Confidence            9999999999999984   233232221122345678899999999996543  1   12222111111        111


Q ss_pred             eeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEE---EcCCCHHHHHHHHHHcCCCccccHHHHHHHH
Q 044410          265 QLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYV---VHPGGDGLLDQVEKTLGLRKEKLWASRYVLR  340 (402)
Q Consensus       265 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i---~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~  340 (402)
                      ...+   .+.|+    ..+.....+.|.++|+++|+++ +|+ +++   +||.|.+|++.+.+++|++.++.+... -+.
T Consensus       194 g~~d---~~nmg----~amaPaA~~ti~~~l~d~g~~~-~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dc-g~~  264 (347)
T 3lma_A          194 GITD---SQDMG----SAMAPAAADTIKQHLEDLGRTP-DDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDC-GLM  264 (347)
T ss_dssp             SCCC---TTCHH----HHHHHHHHHHHHHHHHHHTCCG-GGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEG-GGT
T ss_pred             CCCC---CCCcc----ccchHHHHHHHHHHHHHhCCCH-HHcCEEecCChHHHHHHHHHHHHHHcCCChhHCcccc-ceE
Confidence            1100   01111    1233344467889999999997 999 999   789999999999999999998877521 255


Q ss_pred             hcCCCCc--------chHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccc
Q 044410          341 EYGNMGA--------PSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTV  387 (402)
Q Consensus       341 ~~Gn~~s--------asi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~  387 (402)
                      -|+|...        +...++|.-.+-..     ++.|. .++||++++|+.+|-
T Consensus       265 iy~~~~~~~~ggsg~~csa~v~~~~~~~~-----~~~g~-~~ril~~~tGalls~  313 (347)
T 3lma_A          265 IYTPDQQVFAGGSGCACSAVVTFAHIFKE-----IEAGR-LNRVLVVATGALLSP  313 (347)
T ss_dssp             SSCC---------CCCCHHHHHHHTHHHH-----HHTTS-CSEEEEEEEEECCCH
T ss_pred             EecCCCcccCCCCccccHHHHHHHHHHHH-----HhcCc-ccEEEEEecccccCc
Confidence            6666544        77777776555432     44442 379999999998874

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.87  E-value=2.2e-21  Score=192.20  Aligned_cols=253  Identities=18%  Similarity=0.104  Sum_probs=177.0

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.|++++.++ ...|.++.+++..||++.... +++++.+|+|++.+|..|.++|+
T Consensus        28 ~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p-~~~v~~~Css~~~al~~A~~~I~  106 (395)
T 4e1l_A           28 SAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVP-SYTVNKLCGSGLKSVQLAAQSIT  106 (395)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSC-EEEECCGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCce-EEEccccchHHHHHHHHHHHHHh
Confidence            3889999999999999999999999999999887 677899999999999974332 88999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCccc-cC-----------------------------------------------------------
Q 044410          187 NNPGARVLVVCSDIRVLD-FH-----------------------------------------------------------  206 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~~-~~-----------------------------------------------------------  206 (402)
                      +|.+++|||+++|.+|.. +.                                                           
T Consensus       107 ~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~  186 (395)
T 4e1l_A          107 SGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQ  186 (395)
T ss_dssp             TTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            999999999999988740 00                                                           


Q ss_pred             -------------------------------CCCccch-----h---------------hhhhhhhhccCcEEEEEccCC
Q 044410          207 -------------------------------EPSETHL-----D---------------VLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       207 -------------------------------~~~~~~~-----~---------------~~~~~~lfGDGAaA~vL~~~~  235 (402)
                                                     ++++.-+     +               .......+||||+|+||.+.+
T Consensus       187 ~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~  266 (395)
T 4e1l_A          187 NKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQ  266 (395)
T ss_dssp             HHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBCCCEEEEEEEEEEEHH
T ss_pred             HHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCCCccceEEEEEEecHH
Confidence                                           0000000     0               000133468999999998754


Q ss_pred             CCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCC
Q 044410          236 DISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPG  313 (402)
Q Consensus       236 ~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~  313 (402)
                      .... ...+...+.+.+....                    .+..   .......+++++|+++|+++ +|| ++.+|+.
T Consensus       267 ~A~~~g~~~~a~i~g~~~~~~--------------------~p~~---~~~~~~~ai~~al~~agl~~-~dId~ve~~d~  322 (395)
T 4e1l_A          267 KADELGIRPLAKIKSYASAGV--------------------EPEV---MGTGPIPATRKALKKAGLSI-NDIDLIEANEA  322 (395)
T ss_dssp             HHHHHTCCCSEEEEEEEEEEC--------------------CGGG---TTCTHHHHHHHHHHHTTCCG-GGCSEEEECCS
T ss_pred             HHHHCCCCeEEEEEEEEEccC--------------------CCCc---chHHHHHHHHHHHHHcCCCH-HHcCEEEecCh
Confidence            2000 0112334544332110                    0000   01123467889999999997 999 9999999


Q ss_pred             CHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEe
Q 044410          314 GDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       314 ~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                      .......+.+.||++++++..+ .....+||+.+|+-...+.+++....  +  +.+   .+.+....+.|....+++++
T Consensus       323 fa~~~~~~~~~lg~~~~~v~~~-gg~~~~Gh~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e  394 (395)
T 4e1l_A          323 FAAQALAVKNELQIDSSKLNVN-GGAIALGHPIGASGARILVTLIYEMQ--K--RKV---ETGLATLCIGGGQGISMVVS  394 (395)
T ss_dssp             BHHHHHHHHHHHTCCGGGBSTT-CCHHHHCCCTTTHHHHHHHHHHHHHH--H--HTC---SEEEEEEESSTTEEEEEEEE
T ss_pred             hHHHHHHHHHHhCCCCCCCCcC-CchhhcCCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEEccCCCceEEEEEe
Confidence            9999999999999999887653 13467999998887777666665411  1  122   45444434444444455554

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.86  E-value=2.9e-21  Score=191.26  Aligned_cols=254  Identities=13%  Similarity=0.066  Sum_probs=177.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.+++++.++ ...|..+.+++..||++.... +++++.+|+|++.+|.+|.++|+
T Consensus        28 ~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p-~~~v~~aCss~~~al~~A~~~I~  106 (394)
T 3ss6_A           28 TPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVT-GYTIQRQCSSGMQAIMSAAMQIQ  106 (394)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCE-EEEEECGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCce-EEEecCcchHHHHHHHHHHHHHh
Confidence            3889999999999999999999999999999888 567889999999999974332 89999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCccc-cC-----------------------------------------------------------
Q 044410          187 NNPGARVLVVCSDIRVLD-FH-----------------------------------------------------------  206 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~~-~~-----------------------------------------------------------  206 (402)
                      +|.+++|||+++|.+|.. +.                                                           
T Consensus       107 ~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~  186 (394)
T 3ss6_A          107 LGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHT  186 (394)
T ss_dssp             HTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            999999999999988741 10                                                           


Q ss_pred             -----------------------------CCCccch-----h---------------hhhhhhhhccCcEEEEEccCCCC
Q 044410          207 -----------------------------EPSETHL-----D---------------VLVVQAVFGDGAGAAIIGADSDI  237 (402)
Q Consensus       207 -----------------------------~~~~~~~-----~---------------~~~~~~lfGDGAaA~vL~~~~~~  237 (402)
                                                   +|++.-+     +               .......+||||+|+||.+.+..
T Consensus       187 ~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A  266 (394)
T 3ss6_A          187 LALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKA  266 (394)
T ss_dssp             HHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHH
T ss_pred             HHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCcccceeEEEeccHHHH
Confidence                                         0000000     0               00123356799999999875420


Q ss_pred             CC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCH
Q 044410          238 SN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGD  315 (402)
Q Consensus       238 ~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~  315 (402)
                      .. ...+...+.+.+...   .                 .+..   .......+++++|+++|+++ +|| ++.+|+...
T Consensus       267 ~~~g~~~~a~I~g~~~~~---~-----------------~p~~---~~~~~~~a~~~al~~agl~~-~dId~ve~~d~fa  322 (394)
T 3ss6_A          267 KEKGLQPLARIVGYSVAG---V-----------------DPKI---MGIGPAPAIRKGLEKVDWSL-EDADLLEINEAFA  322 (394)
T ss_dssp             HHHTCCCSEEEEEEEEEE---C-----------------CGGG---GGGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBH
T ss_pred             HHCCCCceEEEEEEEEec---C-----------------CCcc---chHHHHHHHHHHHHHcCCCH-HHcCEEEeCCchH
Confidence            00 011233444432211   0                 0000   11123567889999999997 999 999999999


Q ss_pred             HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          316 GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       316 ~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .....+.+.||++++++..+ .....+||+.+|+-...+.+++....  +  +.+   .+.+....+.|....+++++.
T Consensus       323 ~~~~~~~~~lg~~~~~v~~~-gg~~~~GH~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e~  393 (394)
T 3ss6_A          323 AQYLAVEKELDLDREKVNVN-GSGVGLGHPIGCTGARITVSLIHELK--R--RGL---EKGIASLCVGGGIGVALFIEA  393 (394)
T ss_dssp             HHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---CEEEEEEEETTTEEEEEEEEE
T ss_pred             HHHHHHHHHhCCCCCCCCCC-cchHhhCCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEEccCcCceeEEEEEc
Confidence            99999999999999887653 23457899999997666666655411  1  123   454443333333445566664

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.86  E-value=8.5e-21  Score=188.03  Aligned_cols=253  Identities=15%  Similarity=0.069  Sum_probs=177.5

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      +..+|+.+|+++||+++|++++|||.|+++++++ +..|.++.+++..||++.... .++++.+|+|++.+|..|.++|+
T Consensus        30 ~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p-~~~v~~aCss~~~al~~A~~~I~  108 (396)
T 4dd5_A           30 SAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP-AMTINIVCGSGLRSVSMASQLIA  108 (396)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC-EEEECCGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce-EEEeccccHHHHHHHHHHHHHHh
Confidence            3889999999999999999999999999999988 678899999999999974332 88999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCccc-cCC----------------------------------------------------------
Q 044410          187 NNPGARVLVVCSDIRVLD-FHE----------------------------------------------------------  207 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~~-~~~----------------------------------------------------------  207 (402)
                      +|.+++|||+++|.+|.. +..                                                          
T Consensus       109 ~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~  188 (396)
T 4dd5_A          109 LGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQ  188 (396)
T ss_dssp             HTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence            999999999999998741 100                                                          


Q ss_pred             -------------------------------CCcc-----chh---------------hhhhhhhhccCcEEEEEccCCC
Q 044410          208 -------------------------------PSET-----HLD---------------VLVVQAVFGDGAGAAIIGADSD  236 (402)
Q Consensus       208 -------------------------------~~~~-----~~~---------------~~~~~~lfGDGAaA~vL~~~~~  236 (402)
                                                     +++.     +.+               .......+||||+|+||.+.+.
T Consensus       189 ~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~  268 (396)
T 4dd5_A          189 NKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEK  268 (396)
T ss_dssp             HHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHH
T ss_pred             HHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCCcCcceeEEEEeeHHH
Confidence                                           0000     000               0011234689999999987543


Q ss_pred             CCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCC
Q 044410          237 ISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGG  314 (402)
Q Consensus       237 ~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~  314 (402)
                      ... ...+...+.+.+....                    .+.   ........+++++|+++|+++ +|| +|-.|-..
T Consensus       269 A~~~g~~~~a~I~g~~~~~~--------------------~p~---~~~~~~~~a~~~al~~Agl~~-~dId~ve~~d~f  324 (396)
T 4dd5_A          269 AEELGIEPLATIVSYGTAGV--------------------DPK---IMGYGPVPATKKALEAANMTI-EDIDLVEANEAF  324 (396)
T ss_dssp             HHHHTCCCSEEEEEEEEEEC--------------------CGG---GGGGTHHHHHHHHHHHHTCCG-GGCSEEEECCSB
T ss_pred             HHHCCCCceEEEEEEEEecC--------------------CCC---cccHHHHHHHHHHHHHcCCCH-HHcCEEEecChH
Confidence            000 0112335554332110                    000   011234567889999999997 999 99999987


Q ss_pred             HHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEe
Q 044410          315 DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ  393 (402)
Q Consensus       315 ~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~  393 (402)
                      ......+.+.||++++++..+ .....+||+.+|+-...+.+++....  +  +.+   .+.|....+.|....+++++
T Consensus       325 ~~~~~~~~~~lg~~~~~~n~~-gg~~~~GH~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e  395 (396)
T 4dd5_A          325 AAQSVAVIRDLNIDMNKVNVN-GGAIAIGHPIGCSGARILTTLLYEMK--R--RDA---KTGLATLCIGGGMGTTLIVK  395 (396)
T ss_dssp             HHHHHHHHHHHTCCTTSBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---SEEEEEEEETTTEEEEEEEE
T ss_pred             HHHHHHHHHHhCCCCCccCCC-CchhhccCcHHHHHHHHHHHHHHHHH--h--cCC---CeEEEEEcccCCceeEEEEe
Confidence            777778899999988776543 23557899998887777766665411  1  122   45555444444455566665

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=99.85  E-value=1.2e-20  Score=188.72  Aligned_cols=268  Identities=14%  Similarity=0.142  Sum_probs=186.1

Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC---------------------------CCCCCH
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG---------------------------VDMPGA  147 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~---------------------------~~~p~~  147 (402)
                      ..+..+..+....|+.+|+++||+++|+++++||    .|++++++.                           ...+..
T Consensus        78 ~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (427)
T 3ho9_A           78 SRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMV  157 (427)
T ss_dssp             CHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred             CHHHHhhCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHH
Confidence            3444555566789999999999999999999999    588887631                           123457


Q ss_pred             HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcccc---------------------C
Q 044410          148 DVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF---------------------H  206 (402)
Q Consensus       148 a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~---------------------~  206 (402)
                      +.+|+..||++..   .+.+..+|+|++.||..|.++|++|.++.|||+++|.++..+                     .
T Consensus       158 a~~is~~lgl~Gp---~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~  234 (427)
T 3ho9_A          158 AGHLTIMYGLRGP---SISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAAS  234 (427)
T ss_dssp             HHHHHHHHTCCSC---EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHC
T ss_pred             HHHHHHHhCCCCC---eecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCccc
Confidence            8999999999863   788999999999999999999999999999999999985210                     0


Q ss_pred             CCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHH
Q 044410          207 EPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGN  285 (402)
Q Consensus       207 ~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~  285 (402)
                      .|.+.    ....+++||||+|+||++.+... ........+.+.+....              +..+.. +.   ....
T Consensus       235 ~pfd~----~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d--------------g~~~~~-p~---~~~~  292 (427)
T 3ho9_A          235 RPWDK----ERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSD--------------AYHMTS-PP---ENGA  292 (427)
T ss_dssp             CTTBT----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC--------------CSBTTB-CC---TTCH
T ss_pred             CCccC----CCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCC--------------CCCcCC-CC---CCHH
Confidence            12221    12467899999999998743200 00112344544332210              000000 00   0112


Q ss_pred             hHHHHHHHhhccCCCCCCcce-EEEEc-----CCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410          286 YVDKCLSNAMSPIGISDWNSL-FYVVH-----PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       286 ~~~~~i~~~L~~~gl~~~~di-~~i~H-----~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~  359 (402)
                      ....+++++|+++|+++ +|| ++.+|     +++......+.+.++.+.+++..+ .....+||+.+|+-.+.|..++.
T Consensus       293 ~~~~ai~~al~~Agl~~-~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~  370 (427)
T 3ho9_A          293 GAALAMANALRDAGIEA-SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSIL  370 (427)
T ss_dssp             HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCH-HHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEe-cchHhhccCHHHHHHHHHHHHHH
Confidence            34578899999999997 999 99999     666667888889998877766543 23567999999986666665544


Q ss_pred             hhhhhhcccC----------------------CCCCceEEEEEEcccccceeeEEee
Q 044410          360 KSIEEMKATT----------------------GEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       360 ~~~~~g~i~~----------------------G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      . +.++.+.|                      -.+.++++..+||.|.+.++++|+.
T Consensus       371 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~  426 (427)
T 3ho9_A          371 A-LRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK  426 (427)
T ss_dssp             H-HHHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred             H-HhcCCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence            2 11132211                      0012788999999999999999874

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=99.85  E-value=4e-20  Score=185.46  Aligned_cols=260  Identities=17%  Similarity=0.129  Sum_probs=179.1

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCCC---------------------------CCCCHHHHHHHHc
Q 044410          107 DEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYGV---------------------------DMPGADVRLMRLL  155 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~---------------------------~~p~~a~~i~~~L  155 (402)
                      +...+|+.+|+++||+++|+++++||    .|+++++++.                           ..+..+.+|+..|
T Consensus        96 d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l  175 (437)
T 2gqd_A           96 DRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDL  175 (437)
T ss_dssp             CHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHh
Confidence            44789999999999999999999999    9999887541                           1125789999999


Q ss_pred             CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcccc--------------------CCCCccchhh
Q 044410          156 GLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF--------------------HEPSETHLDV  215 (402)
Q Consensus       156 Gl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~--------------------~~~~~~~~~~  215 (402)
                      |+.. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.+...+                    ..|.+.+   
T Consensus       176 gl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~~---  249 (437)
T 2gqd_A          176 GAKG-P--NGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEG---  249 (437)
T ss_dssp             TCCS-S--EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCTT---
T ss_pred             CCCC-c--eEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCCC---
Confidence            9987 3  788999999999999999999999999999999999742110                    1232211   


Q ss_pred             hhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHh
Q 044410          216 LVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNA  294 (402)
Q Consensus       216 ~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~  294 (402)
                       ...+++||||+|+||++.+... .......++.+.+....              +..++ .+. +  ......++++++
T Consensus       250 -~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d--------------g~~~~-~p~-~--~~~~~~~ai~~A  310 (437)
T 2gqd_A          250 -RDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGD--------------AYHIT-APA-P--EGEGGSRAMQAA  310 (437)
T ss_dssp             -CCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC--------------CSCSS-SCC-G--GGHHHHHHHHHH
T ss_pred             -CCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCC--------------CCCCC-CCC-C--CHHHHHHHHHHH
Confidence             2468999999999998654200 00012334544332211              10000 000 0  123456789999


Q ss_pred             hccCCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc
Q 044410          295 MSPIGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT  368 (402)
Q Consensus       295 L~~~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~  368 (402)
                      |+++|+++ +|| ++.+|+.+..+.+     .+.+.++.+.++++.+ .+-..+||+.+|+-.+.|..++.. +.++.+.
T Consensus       311 l~~Agl~p-~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~-s~k~~~GH~~gAaG~~~li~~~l~-l~~~~ip  387 (437)
T 2gqd_A          311 MDDAGIEP-KDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVS-STKSMTGHLLGATGGIEAIFSALS-IKDSKVA  387 (437)
T ss_dssp             HHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEEC
T ss_pred             HHHcCCCH-hhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceee-cchhhhcCChhhhhHHHHHHHHHH-HhcCCCC
Confidence            99999997 999 9999999987643     4556677654555542 124568999999877776655542 1113321


Q ss_pred             C-------C--------------CCCceEEEEEEcccccceeeEEee
Q 044410          369 T-------G--------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       369 ~-------G--------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      |       .              .+.++++..+||.|.+-++++|+.
T Consensus       388 p~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~  434 (437)
T 2gqd_A          388 PTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKK  434 (437)
T ss_dssp             CBTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEEC
T ss_pred             CCCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEe
Confidence            0       0              012678889999999999999875

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=99.84  E-value=1.6e-19  Score=179.86  Aligned_cols=268  Identities=14%  Similarity=0.131  Sum_probs=178.2

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecC-----------------C-CCCC---------CHH
Q 044410          100 ARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFY-----------------G-VDMP---------GAD  148 (402)
Q Consensus       100 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~-----------------~-~~~p---------~~a  148 (402)
                      .+.....+....|+.+|+++||+++|+++++||    .|++++++                 + ...|         ..+
T Consensus        65 ~~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a  144 (413)
T 3o04_A           65 KKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGS  144 (413)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHH
T ss_pred             HHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHH
Confidence            344444556788999999999999999999999    99998864                 1 1222         248


Q ss_pred             HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc--------------c------CCC
Q 044410          149 VRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD--------------F------HEP  208 (402)
Q Consensus       149 ~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~--------------~------~~~  208 (402)
                      .+|+..||++. +  .++++.+|+|++.||..|.++|++|.++.|||+++|.+...              .      ..|
T Consensus       145 ~~ia~~lgl~g-p--~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~p  221 (413)
T 3o04_A          145 GQVSIRFGAKG-I--NSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRP  221 (413)
T ss_dssp             HHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCT
T ss_pred             HHHHHHhCCCC-c--ceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCC
Confidence            89999999986 3  78899999999999999999999999999999999983110              0      112


Q ss_pred             CccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhH
Q 044410          209 SETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYV  287 (402)
Q Consensus       209 ~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~  287 (402)
                      .+.    ....+++||||+|+||++.+... ........+.+.+...              ++.+  +....+  .....
T Consensus       222 fd~----~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~--------------dg~~--~~~~~~--~~~~~  279 (413)
T 3o04_A          222 FDK----DRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATG--------------DAYH--ITAPAP--NGEGA  279 (413)
T ss_dssp             TBT----TCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEE--------------CCSC--SSSCCG--GGHHH
T ss_pred             CcC----CCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcC--------------CCCC--CCCCCC--CHHHH
Confidence            221    12467899999999998743200 0011234454432211              0100  000000  12345


Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhh
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKS  361 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~  361 (402)
                      .++++++|+++|+++ +|| ++.+|..+....+.     +.+.++...+++..+ ..-..+||+.+|+-.+.|..++.. 
T Consensus       280 ~~a~~~al~~agl~~-~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~~~~~~~~-  356 (413)
T 3o04_A          280 ARAMKMAIDDAGLTP-DKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAIS-STKSMTGHTLGASGGIEAIFALLT-  356 (413)
T ss_dssp             HHHHHHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCcee-cccccccccHHHHHHHHHHHHHHH-
Confidence            678899999999997 999 99999888765543     344555443444332 134567999999876666555442 


Q ss_pred             hhhhcccC-----------------C----CCCceEEEEEEcccccceeeEEeee
Q 044410          362 IEEMKATT-----------------G----EGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       362 ~~~g~i~~-----------------G----~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      +.++.+.|                 +    .+..+++.-+||.|.+-++++|+..
T Consensus       357 l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~  411 (413)
T 3o04_A          357 IRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKRI  411 (413)
T ss_dssp             HHHTEECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred             HHhCCcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence            11132210                 0    0126778889999999999999864

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.83  E-value=4.7e-20  Score=184.39  Aligned_cols=265  Identities=12%  Similarity=0.077  Sum_probs=181.5

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C---------------------------CCCCH
Q 044410          100 ARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V---------------------------DMPGA  147 (402)
Q Consensus       100 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~---------------------------~~p~~  147 (402)
                      .+..+..+...+|+.+|+++||+++|+++++||    .|+++++++ +                           ..|+.
T Consensus        64 ~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (424)
T 1tqy_A           64 PRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYL  143 (424)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhccccccc
Confidence            344455566789999999999999999999999    688887654 2                           11222


Q ss_pred             -HH----HHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------cC-----
Q 044410          148 -DV----RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------FH-----  206 (402)
Q Consensus       148 -a~----~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~-----  206 (402)
                       +.    +|+..||+.. +  .+.++.+|+|++.||..|.++|++|.++.+||+++|.+...           +.     
T Consensus       144 ~a~~~~~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~  220 (424)
T 1tqy_A          144 VPSVMPAEVAWAVGAEG-P--VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDD  220 (424)
T ss_dssp             STTHHHHHHHHHHTCCS-C--EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSC
T ss_pred             ccchhHhHHHHhcCCCC-c--eEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCC
Confidence             34    9999999986 3  78999999999999999999999999999999999985211           00     


Q ss_pred             -----CCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchh
Q 044410          207 -----EPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVP  280 (402)
Q Consensus       207 -----~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~  280 (402)
                           .|.+.    ....+++||||+|+||++.+... ........+.+.+....              +..+.. .. +
T Consensus       221 p~~~~rpfd~----~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d--------------g~~~~~-p~-~  280 (424)
T 1tqy_A          221 PEHASRPFDG----TRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCN--------------AYHMTG-LK-A  280 (424)
T ss_dssp             GGGCCCTTBT----TCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC--------------SSCSSC-CC-T
T ss_pred             CCCCccCCCC----CCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCC--------------CCCCCC-CC-C
Confidence                 12111    12467999999999998753200 00011234444322111              100000 00 0


Q ss_pred             HHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHH-----HHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHH
Q 044410          281 VAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLL-----DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFIL  354 (402)
Q Consensus       281 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~-----~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L  354 (402)
                        ......++++++|+++|+++ +|| ++.+|+.+..+-     ..+.+.++...++++.+ .+-..+||+.+|+-++.|
T Consensus       281 --~g~~~~~ai~~al~~agl~~-~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~-s~k~~~GH~~~AaG~~~l  356 (424)
T 1tqy_A          281 --DGREMAETIRVALDESRTDA-TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEI  356 (424)
T ss_dssp             --TCHHHHHHHHHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHH
T ss_pred             --CHHHHHHHHHHHHHHcCCCH-HHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeee-ccccccccChhhhHHHHH
Confidence              01245678899999999997 999 999999987753     44556676554455432 124568999999988887


Q ss_pred             HHHHHhhhhhhccc------------------------CCCCCceEEEEEEcccccceeeEEeee
Q 044410          355 DEVRKKSIEEMKAT------------------------TGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       355 ~~~~~~~~~~g~i~------------------------~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      ..++.. +.++.+.                        +.   ++++..+||.|.+.++++|+..
T Consensus       357 ~~~~l~-l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~---~~a~~~sfG~GG~n~~~vl~~~  417 (424)
T 1tqy_A          357 AACVLA-LEHGVVPPTANLRTSDPECDLDYVPLEARERKL---RSVLTVGSGFGGFQSAMVLRDA  417 (424)
T ss_dssp             HHHHHH-HHHCEECCBTTCCSBBTTBCSCCCBSSCEECCC---SEEEEEEEETTTEEEEEEEECH
T ss_pred             HHHHHH-HHcCCcCCCCCCCCCCCCCCcccCCCcccCCCC---CEEEEccccCCceEEEEEEccC
Confidence            765432 1114332                        23   7899999999999999999874

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=99.82  E-value=2.2e-19  Score=180.05  Aligned_cols=266  Identities=14%  Similarity=0.078  Sum_probs=179.4

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCCCC-CCcc----EEEEEecCC-C-------------------------CCC-CH
Q 044410          100 ARQAMLIDEVPKLGKEAALKAIKEWGQPV-SKIT----HLIFSAFYG-V-------------------------DMP-GA  147 (402)
Q Consensus       100 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~-~dId----~li~~s~~~-~-------------------------~~p-~~  147 (402)
                      .+..+..+...+|+.+|+++||+++|+++ ++||    .|+++++++ +                         ..+ ..
T Consensus        88 ~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  167 (438)
T 2iwz_A           88 KSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMA  167 (438)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHH
Confidence            44444556688999999999999999998 8888    578877643 1                         123 47


Q ss_pred             HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC-ccc----------c---------CC
Q 044410          148 DVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VLD----------F---------HE  207 (402)
Q Consensus       148 a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~---------~~  207 (402)
                      +.+|+..||++. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.+ +..          +         ..
T Consensus       168 a~~ia~~lgl~g-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~  244 (438)
T 2iwz_A          168 AGQVSIRYKLKG-P--NHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACR  244 (438)
T ss_dssp             HHHHHHHHTCCS-C--EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCC
T ss_pred             HHHHHHHhCCCC-c--eeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccc
Confidence            899999999987 3  78999999999999999999999999999999999973 210          0         01


Q ss_pred             CCccchhhhhhhhhhccCcEEEEEccCCCC--CCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHH
Q 044410          208 PSETHLDVLVVQAVFGDGAGAAIIGADSDI--SNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGN  285 (402)
Q Consensus       208 ~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~  285 (402)
                      |.+.+    ...+++||||+|+||++.+..  .+ .....++.+.+.......   +           + .+..   ...
T Consensus       245 pfd~~----~~G~~~geGAaavvL~~~~~A~~~g-~~i~a~I~g~~~~~d~~~---~-----------t-~p~~---~~~  301 (438)
T 2iwz_A          245 PFHPK----RDGFVMGEGAAVLVLEEYEHAVQRR-ARIYAEVLGYGLSGDAGH---I-----------T-APDP---EGE  301 (438)
T ss_dssp             TTCTT----CCSBCBBCEEEEEEEEEHHHHHHTT-CCCCEEEEEEEEEECCSC---S-----------S-SCCT---TCH
T ss_pred             cCCCC----CCCEEeeceEEEEEeccHHHHHhCC-CceEEEEecceecCCCCC---C-----------C-CCCC---CHH
Confidence            22211    236799999999999875320  01 112334544332211000   0           0 0000   113


Q ss_pred             hHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410          286 YVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       286 ~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~  359 (402)
                      ...++++++|+++|+++ +|| ++.+|+.+..+-+     .+.+.++...++++.+ .+-..+||+.+|+-.+.|..++.
T Consensus       302 ~~~~ai~~Al~~Agl~p-~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~-s~K~~~GH~~gAaG~~~li~~~l  379 (438)
T 2iwz_A          302 GALRCMAAALKDAGVQP-EEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVS-STKGATGHLLGAAGAVEAAFTTL  379 (438)
T ss_dssp             HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CCHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCH-HHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCccee-cchhhhcCCHHHHHHHHHHHHHH
Confidence            45678899999999997 999 9999999877633     4555666554555432 12457799999988877765553


Q ss_pred             hhhhhhccc------------------------CCCCCceEEEEEEcccccceeeEEee
Q 044410          360 KSIEEMKAT------------------------TGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       360 ~~~~~g~i~------------------------~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      . +..+.+.                        +..+..+++.-+||.|.+-..++|+.
T Consensus       380 ~-l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~  437 (438)
T 2iwz_A          380 A-CYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG  437 (438)
T ss_dssp             H-HHHTEECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred             H-HhcCccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence            2 1113321                        10012567788999999988988874

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.82  E-value=5e-20  Score=183.58  Aligned_cols=294  Identities=11%  Similarity=-0.030  Sum_probs=175.1

Q ss_pred             CCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHH--HcCcceee-cccchhHhhhCCCCccCCCCChHHHHHHHHhhH
Q 044410           33 TPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICE--RQSIKKRY-FHLTEEILKENPNMCCYEAPSLDARQAMLIDEV  109 (402)
Q Consensus        33 lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~--~~Gi~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (402)
                      =|+++++|+++.+........+         .+|..  +|.+.+|+ .+.+++                         +.
T Consensus        10 ~P~~~~~n~~~~~~~~~~~~~~---------v~Ivg~~rt~~g~~~~~~~~~~-------------------------~~   55 (418)
T 2iik_A           10 GVDLGTENLYFQSMAPQASAAD---------VVVVHGRRTAICRAGRGGFKDT-------------------------TP   55 (418)
T ss_dssp             -----------------CCTTC---------EEEEEEEECCCEETTTSTTTTC-------------------------CH
T ss_pred             CCCccccHHHHHHHhhhccCCC---------eEEEeeeecCceecCCCCCCCC-------------------------CH
Confidence            3999999999987642100011         24443  56666542 222332                         38


Q ss_pred             HHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCC-CccccceeeccccchHHHHHHHHHHHHHc
Q 044410          110 PKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLK-PSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       110 ~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~-~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      .+|+.+|+++||+++|+++++||.|+++++++ +..|..+..++..||++ ..+  +++++.+|+|++.||..|.++|++
T Consensus        56 ~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p--~~~v~~aCss~~~Al~~A~~~I~~  133 (418)
T 2iik_A           56 DELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVP--LSTVNRQCSSGLQAVASIAGGIRN  133 (418)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC--EEEEECGGGHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCce--EEEeCCCCHHHHHHHHHHHHHHHC
Confidence            89999999999999999999999999998877 55567788889999995 333  789999999999999999999999


Q ss_pred             CCCCeEEEEEeccCccc-c-------------------------------------------------------------
Q 044410          188 NPGARVLVVCSDIRVLD-F-------------------------------------------------------------  205 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~~-~-------------------------------------------------------------  205 (402)
                      |.++.|||+++|.++.. +                                                             
T Consensus       134 G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~  213 (418)
T 2iik_A          134 GSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCF  213 (418)
T ss_dssp             TSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCcc
Confidence            99999999999987641 0                                                             


Q ss_pred             CCC----------------------Cccch--------------hhh------hhhhhhccCcEEEEEccCCCCCC-CCC
Q 044410          206 HEP----------------------SETHL--------------DVL------VVQAVFGDGAGAAIIGADSDISN-HES  242 (402)
Q Consensus       206 ~~~----------------------~~~~~--------------~~~------~~~~lfGDGAaA~vL~~~~~~~~-~~~  242 (402)
                      .++                      ++.-+              -+.      ...+.++|||+|+||.+.+.... ...
T Consensus       214 ~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~  293 (418)
T 2iik_A          214 QAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLP  293 (418)
T ss_dssp             TTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCC
T ss_pred             ccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCCCCCceEEEEecHHHHHhcCCC
Confidence            000                      00000              000      13456789999999986543000 011


Q ss_pred             CceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHH
Q 044410          243 PLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQV  321 (402)
Q Consensus       243 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~  321 (402)
                      +...+.+.+...   .                 .++.+   ......+++++|+++|+++ +|| +|-.|-......-..
T Consensus       294 ~~a~i~g~~~~~---~-----------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~vE~h~af~~~~~~~  349 (418)
T 2iik_A          294 ILGVLRSYAVVG---V-----------------PPDIM---GIGPAYAIPVALQKAGLTV-SDVDIFEINEAFASQAAYC  349 (418)
T ss_dssp             CCEEEEEEEEEE---C-----------------CGGGG---GGHHHHHHHHHHHHHTCCG-GGEEEEEECCSBHHHHHHH
T ss_pred             ceEEEEEEEecc---C-----------------Cchhc---chhHHHHHHHHHHHcCCCH-HHCCeeeeeccchHHHHHH
Confidence            223444322210   0                 01111   1122457889999999997 999 999997655444445


Q ss_pred             HHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCc-eEEEEEEcccccceeeEEee
Q 044410          322 EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLE-CGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       322 ~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d-~vll~~~G~G~~~~~~ll~~  394 (402)
                      .+.||++++++..+- -+..+||...|+-...+.+++....  +  +.+   . +.+....+.|....+++++.
T Consensus       350 ~~~lg~~~~~vN~~G-G~~a~GHp~GAsG~~~~~~~~~~L~--~--~~~---~~~gl~~~c~ggG~g~a~~~e~  415 (418)
T 2iik_A          350 VEKLRLPPEKVNPLG-GAVALGHPLGCTGARQVITLLNELK--R--RGK---RAYGVVSMCIGTGMGAAAVFEY  415 (418)
T ss_dssp             HHHHTCCGGGBCTTC-CHHHHCCCHHHHHHHHHHHHHHHHH--H--HTS---CEEEEEEEEETTTEEEEEEEEE
T ss_pred             HHHcCCCccccCCCC-CeeeecCChhhhHHHHHHHHHHHHH--h--cCC---CeeeEEEEeeccchhheEEEec
Confidence            678999877665421 1146899988885555555444311  1  122   3 43433333333445778875

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.82  E-value=5.5e-20  Score=182.97  Aligned_cols=267  Identities=12%  Similarity=0.122  Sum_probs=183.2

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-CC-------------------------CC-CHH
Q 044410          100 ARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-VD-------------------------MP-GAD  148 (402)
Q Consensus       100 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~~-------------------------~p-~~a  148 (402)
                      .+..+..+...+|+.+|+++||+++|+++++||    .++++++++ +.                         .| ..+
T Consensus        62 ~~~~~~~d~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  141 (408)
T 1j3n_A           62 RKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMAS  141 (408)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHH
Confidence            344445556889999999999999999999998    467776643 10                         23 468


Q ss_pred             HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------cCC-----------
Q 044410          149 VRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FHE-----------  207 (402)
Q Consensus       149 ~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~~~-----------  207 (402)
                      .+|+..||++. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.+...          +..           
T Consensus       142 ~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~  218 (408)
T 1j3n_A          142 AHIAMRYGFTG-P--SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASR  218 (408)
T ss_dssp             HHHHHHHTCCS-C--BCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCC
T ss_pred             HHHHHHhCCCC-c--eeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcc
Confidence            99999999986 3  78999999999999999999999999999999999974211          111           


Q ss_pred             CCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHh
Q 044410          208 PSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNY  286 (402)
Q Consensus       208 ~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~  286 (402)
                      |.+.    ....+++||||+|+||++.+... .......++.+.+....              +.++. .+.   .....
T Consensus       219 pfd~----~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d--------------~~~~~-~p~---~~~~~  276 (408)
T 1j3n_A          219 PFTL----SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSAD--------------AHHIT-EPH---PEGKG  276 (408)
T ss_dssp             TTBT----TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC--------------CSCSS-CCC---TTCHH
T ss_pred             cCcC----CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCC--------------CCCCC-CCC---CCHHH
Confidence            2221    12467999999999998654200 00112344544322111              10000 000   01234


Q ss_pred             HHHHHHHhhccCCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410          287 VDKCLSNAMSPIGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       287 ~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      ...+++++|+++|+++ +|| ++.+|+.+..+     +..+.+.||.+.+++..+ .....+||+.+|+-++.|..++..
T Consensus       277 ~~~ai~~al~~Agl~~-~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~~AsG~~~li~~~l~  354 (408)
T 1j3n_A          277 AALAMARALKDAGIAP-EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIGHLLGAAGAVEAIATVQA  354 (408)
T ss_dssp             HHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEE-CchhhhccCHHHHHHHHHHHHHHH
Confidence            5678899999999997 999 99999998775     666778888766666542 134689999999988877655542


Q ss_pred             hhhhhcccCC--------------------CCCceEEEEEEcccccceeeEEee
Q 044410          361 SIEEMKATTG--------------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       361 ~~~~g~i~~G--------------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                       +.++.+.|-                    .+.++++..+||-|.+-++++|+.
T Consensus       355 -l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~  407 (408)
T 1j3n_A          355 -LYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR  407 (408)
T ss_dssp             -HHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred             -HhcCCCCCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence             111332110                    012678889999999999999874

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=99.81  E-value=2e-19  Score=179.92  Aligned_cols=267  Identities=15%  Similarity=0.106  Sum_probs=185.0

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCC-cc----EEEEEecC--------------------------C-CCCCCH
Q 044410          100 ARQAMLIDEVPKLGKEAALKAIKEWGQPVSK-IT----HLIFSAFY--------------------------G-VDMPGA  147 (402)
Q Consensus       100 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~d-Id----~li~~s~~--------------------------~-~~~p~~  147 (402)
                      .+..+..+....|+.+|+++||+++|+++++ ||    .++++++.                          + ...+..
T Consensus        78 ~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (428)
T 3kzu_A           78 PKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLA  157 (428)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHH
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhH
Confidence            4444455567899999999999999999998 87    57777652                          2 234467


Q ss_pred             HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCc---------------cc-------c
Q 044410          148 DVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV---------------LD-------F  205 (402)
Q Consensus       148 a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s---------------~~-------~  205 (402)
                      +.+|+..||+.. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.+.               ..       .
T Consensus       158 a~~is~~lgl~G-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~  234 (428)
T 3kzu_A          158 SGHVSIKHKLRG-P--NHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAA  234 (428)
T ss_dssp             HHHHHHHHTCCS-C--EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGT
T ss_pred             HHHHHHHcCCCC-c--eeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccc
Confidence            899999999986 3  788999999999999999999999999999999999831               10       0


Q ss_pred             CCCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHH
Q 044410          206 HEPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIG  284 (402)
Q Consensus       206 ~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~  284 (402)
                      ..|.+    .....+++||||+|+||++.+... ........+.+.+....              +..+. .+..   ..
T Consensus       235 ~~pfd----~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d--------------g~~~~-~p~~---~~  292 (428)
T 3kzu_A          235 SRPYD----EDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGD--------------AFHIT-APTE---SG  292 (428)
T ss_dssp             CCTTB----TTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC--------------CSCSS-SCCT---TC
T ss_pred             cCCcc----cCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccC--------------CCCCC-CCCC---CH
Confidence            01211    112467899999999998743200 00112334443322110              00000 0000   11


Q ss_pred             HhHHHHHHHhhccCCCCCCcce-EEEEc----CCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410          285 NYVDKCLSNAMSPIGISDWNSL-FYVVH----PGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H----~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~  359 (402)
                      .....+++++|+++|+++ +|| ++.+|    +++...++.+.+.++.+.+++..+ .....+||+.+|+-.+.+..++.
T Consensus       293 ~~~~~ai~~al~~Agl~~-~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~  370 (428)
T 3kzu_A          293 EGAQRCMVAALKRAGIVP-DEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMS-STKSSIGHLLGAAGAAEAVFSTL  370 (428)
T ss_dssp             HHHHHHHHHHHHHHTCCG-GGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCH-HHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeC-CchhhhCCCchhhHHHHHHHHHH
Confidence            234578889999999997 999 99999    888888889999999887776653 24568999998887777766554


Q ss_pred             hhhhhhcccC-----------------C----CCCceEEEEEEcccccceeeEEee
Q 044410          360 KSIEEMKATT-----------------G----EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       360 ~~~~~g~i~~-----------------G----~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      . +.++.+.|                 .    .+.++++.-+||.|.+-++++|+.
T Consensus       371 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~  425 (428)
T 3kzu_A          371 A-IRDNIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRR  425 (428)
T ss_dssp             H-HHHTEECCBTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred             H-hccCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEee
Confidence            2 11132211                 0    012578889999999999999874

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=99.81  E-value=4.9e-19  Score=177.24  Aligned_cols=260  Identities=15%  Similarity=0.102  Sum_probs=172.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCCC----------------------C----CC-CHHHHHHHHcC
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYGV----------------------D----MP-GADVRLMRLLG  156 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~----------------------~----~p-~~a~~i~~~LG  156 (402)
                      ...+|+.+|+++||+++|+++++||    .|+++++++.                      .    .+ ..+.+|+..||
T Consensus        92 ~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg  171 (430)
T 1ox0_A           92 NYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFG  171 (430)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhc
Confidence            4678999999999999999999999    5888776531                      1    12 46889999999


Q ss_pred             CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------cCC----CCcc--chhhhhhhh
Q 044410          157 LKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FHE----PSET--HLDVLVVQA  220 (402)
Q Consensus       157 l~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~~~----~~~~--~~~~~~~~~  220 (402)
                      +.. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.+...          ...    |...  ..+.....+
T Consensus       172 l~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g~  248 (430)
T 1ox0_A          172 ANG-V--CKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGF  248 (430)
T ss_dssp             CCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCSB
T ss_pred             CCC-c--eEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCCc
Confidence            986 3  78999999999999999999999999999999999985321          011    1100  001112468


Q ss_pred             hhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCC
Q 044410          221 VFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIG  299 (402)
Q Consensus       221 lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g  299 (402)
                      ++||||+|+||++.+... .......++.+.+....              +..+. .+.   ........+++++|+++|
T Consensus       249 ~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d--------------g~~~~-~p~---~~~~~~~~ai~~al~~Ag  310 (430)
T 1ox0_A          249 VMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCD--------------AYHMT-SPH---PEGQGAIKAIKLALEEAE  310 (430)
T ss_dssp             CBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC--------------CSCSS-SCC---TTCHHHHHHHHHHHHHHT
T ss_pred             cccceEEEEEECcHHHHHhCCCceEEEEEEEEEecC--------------CCCCC-CCC---CChHHHHHHHHHHHHHhC
Confidence            999999999998754200 00112344544322111              10000 000   012345678899999999


Q ss_pred             CCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccC----
Q 044410          300 ISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT----  369 (402)
Q Consensus       300 l~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~----  369 (402)
                      +++ +|| ++.+|+.+....+.     +.+.+|-   +++.+ .+-..+||+.+|+-.+.+..++.. +.++.+.|    
T Consensus       311 l~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~---~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~-l~~~~ipp~~~~  384 (430)
T 1ox0_A          311 ISP-EQVAYVNAHGTSTPANEKGESGAIVAVLGK---EVPVS-STKSFTGHLLGAAGAVEAIVTIEA-MRHNFVPMTAGT  384 (430)
T ss_dssp             CCG-GGCCCEECCCCSCHHHHHHHHHHHHHHHCS---SSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCBSSC
T ss_pred             cCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhCC---Cceec-ccccccccchhhHHHHHHHHHHHH-HhcCccCCCCCC
Confidence            997 999 99999999876653     4455653   22221 023458999999877776655532 11133210    


Q ss_pred             -------------C----CCCceEEEEEEcccccceeeEEee
Q 044410          370 -------------G----EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       370 -------------G----~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                                   .    .+..+++..+||.|.+-++++|+.
T Consensus       385 ~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~  426 (430)
T 1ox0_A          385 SEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR  426 (430)
T ss_dssp             CSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred             CCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEee
Confidence                         0    012678889999999999999875

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.80  E-value=3.2e-19  Score=177.08  Aligned_cols=254  Identities=10%  Similarity=0.039  Sum_probs=168.3

Q ss_pred             hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG-V-DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~-~-~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|+++||++ +|++++|||.|++++.++ . ..|.++.+++..+|++.... .++++.+|+|++.+|..|.++
T Consensus        31 ~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~p-a~~v~~~Css~~~Al~~A~~~  109 (407)
T 3svk_A           31 KPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTG-GVQLNRFCASGLEAVNTAAQK  109 (407)
T ss_dssp             CHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCE-EEEEC---CBSCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCc-eEEecCcChhHHHHHHHHHHH
Confidence            3789999999999999 999999999999999887 3 36889999999999954332 899999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCccc-c----------------------------------------------------------
Q 044410          185 AENNPGARVLVVCSDIRVLD-F----------------------------------------------------------  205 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~~-~----------------------------------------------------------  205 (402)
                      |++|.++.|||+++|.+|.. +                                                          
T Consensus       110 I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g  189 (407)
T 3svk_A          110 VRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGG  189 (407)
T ss_dssp             HHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999988741 0                                                          


Q ss_pred             -----------------CCCCcc-----chh------------------------------------hhhhhhhhccCcE
Q 044410          206 -----------------HEPSET-----HLD------------------------------------VLVVQAVFGDGAG  227 (402)
Q Consensus       206 -----------------~~~~~~-----~~~------------------------------------~~~~~~lfGDGAa  227 (402)
                                       .+|+..     +.+                                    .......++|||+
T Consensus       190 ~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAa  269 (407)
T 3svk_A          190 YFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAA  269 (407)
T ss_dssp             TTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCCCBTTTBCCBEEEEE
T ss_pred             CcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccccccccccccccCcccCcee
Confidence                             000000     000                                    0012234789999


Q ss_pred             EEEEccCCCCCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce
Q 044410          228 AAIIGADSDISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL  306 (402)
Q Consensus       228 A~vL~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di  306 (402)
                      |+||.+.+.... ...+..++.+.+...    .+.       .    .++        .....+++++|+++|+++ +||
T Consensus       270 avvL~s~~~A~~~g~~~~a~i~g~~~~~----~~p-------~----~~~--------~~~~~a~~~al~~Agl~~-~dI  325 (407)
T 3svk_A          270 LVLVGSEKAGKSQGLTPRARIVATATSG----SDP-------V----IML--------TGPTPATRKVLDRAGLTI-DDI  325 (407)
T ss_dssp             EEEEECHHHHHHTTCCCCEEEEEEEEC---------------------CC--------CTHHHHHHHHHHHHTCCG-GGC
T ss_pred             EEEEeeHHHHHHcCCCCcEEEEEEEEec----cCC-------c----ccc--------HHHHHHHHHHHHHcCCCH-HHC
Confidence            999976542000 011234454433210    000       0    000        112357889999999997 999


Q ss_pred             -EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccc
Q 044410          307 -FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGL  385 (402)
Q Consensus       307 -~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~  385 (402)
                       ++-+|.........+.+.||++++++..+ -..--+||...++-...+.+++.+..  +  +.+   .+.|....+.|.
T Consensus       326 d~~e~hdaf~~~~l~~~~~lg~~~~~vn~~-Gg~~~~GHp~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG  397 (407)
T 3svk_A          326 DLFELNEAFASVVLKFQKDLNIPDEKLNVN-GGAIAMGHPLGATGAMITGTMVDELE--R--RNA---RRALITLCIGGG  397 (407)
T ss_dssp             SEEEECCSBHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCGGGHHHHHHHHHHHHHH--H--HTC---CEEEEEEECSSS
T ss_pred             CEEEEeChhHHHHHHHHHHhCCCCCCCCCC-CcHhheeCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEeeccCc
Confidence             99999999888778889999999887653 12345899998887666666655411  1  123   566655555555


Q ss_pred             cceeeEEee
Q 044410          386 TVETVVLQS  394 (402)
Q Consensus       386 ~~~~~ll~~  394 (402)
                      ...+++++.
T Consensus       398 ~g~a~~~e~  406 (407)
T 3svk_A          398 MGVATIIER  406 (407)
T ss_dssp             CEEEEEEEE
T ss_pred             ceEEEEEEc
Confidence            666777764

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=99.80  E-value=4.8e-19  Score=176.58  Aligned_cols=269  Identities=16%  Similarity=0.114  Sum_probs=181.8

Q ss_pred             hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCCC------------------C---------CCC
Q 044410           98 LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYGV------------------D---------MPG  146 (402)
Q Consensus        98 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~------------------~---------~p~  146 (402)
                      +..+..++.+...+|+.+|+++||+++|+++++||    .|+++++++.                  .         ...
T Consensus        66 ~~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  145 (416)
T 1e5m_A           66 LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANM  145 (416)
T ss_dssp             SCHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTH
T ss_pred             CCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHH
Confidence            34555666667889999999999999999999999    7888876531                  1         124


Q ss_pred             HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC-ccc----------c----------
Q 044410          147 ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VLD----------F----------  205 (402)
Q Consensus       147 ~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~----------  205 (402)
                      .+.+|+..||++. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.+ +..          +          
T Consensus       146 ~a~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~  222 (416)
T 1e5m_A          146 ASGLTAINLGAKG-P--NNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHA  222 (416)
T ss_dssp             HHHHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGT
T ss_pred             HHHHHHHHhCCCC-c--eeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccc
Confidence            7899999999986 3  78899999999999999999999999999999999973 321          0          


Q ss_pred             CCCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHH
Q 044410          206 HEPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIG  284 (402)
Q Consensus       206 ~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~  284 (402)
                      ..|.+.+    ...+++||||+|+||++.+... .......++.+.+.......   +           +. +. +  ..
T Consensus       223 ~rpfd~~----~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~---~-----------~~-p~-~--~~  280 (416)
T 1e5m_A          223 SRPFDKD----RDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYH---I-----------TA-PV-P--DG  280 (416)
T ss_dssp             CCTTBTT----CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---S-----------SS-CC-T--TC
T ss_pred             cccCccC----CCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCC---C-----------CC-CC-C--CH
Confidence            0122211    2367899999999998753200 00112344544332211000   0           00 00 0  11


Q ss_pred             HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410          285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVR  358 (402)
Q Consensus       285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~  358 (402)
                      ....++++++|+++|+++ +|| ++.+|+.+..+.+     .+.+.+|...++++.+ .+-..+||+.+|+-.+.+..++
T Consensus       281 ~~~~~ai~~al~~agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAaG~~~~i~~~  358 (416)
T 1e5m_A          281 RGATRAIAWALKDSGLKP-EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATV  358 (416)
T ss_dssp             HHHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCH-hHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeee-CcchhhcccHHHHHHHHHHHHH
Confidence            345678899999999997 999 9999999887644     4456676554555432 1345689999998777665554


Q ss_pred             HhhhhhhcccC-------C--------------CCCceEEEEEEcccccceeeEEee
Q 044410          359 KKSIEEMKATT-------G--------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       359 ~~~~~~g~i~~-------G--------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .. +.++.+.|       .              .+.++++.-+||-|.+-.+++|+.
T Consensus       359 ~~-l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~  414 (416)
T 1e5m_A          359 MA-IAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK  414 (416)
T ss_dssp             HH-HHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred             HH-HhcCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEEe
Confidence            32 11133210       0              012577888999999988988874

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.79  E-value=4.6e-18  Score=169.44  Aligned_cols=254  Identities=12%  Similarity=0.062  Sum_probs=171.3

Q ss_pred             hhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C--------------------------CCCCHHHHHHHHc
Q 044410          107 DEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V--------------------------DMPGADVRLMRLL  155 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~--------------------------~~p~~a~~i~~~L  155 (402)
                      +....|+.+|+++||+++|+++++||    .|+++++++ +                          ..+..+.+|+..|
T Consensus        77 d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l  156 (415)
T 1tqy_B           77 DPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRH  156 (415)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHh
Confidence            34678999999999999999999999    888887743 1                          2356789999999


Q ss_pred             CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC-ccc----------c---------CCCCccchhh
Q 044410          156 GLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VLD----------F---------HEPSETHLDV  215 (402)
Q Consensus       156 Gl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~~----------~---------~~~~~~~~~~  215 (402)
                      |++. +  .+.++.+|+|++.||..|.++|++| ++.|||+++|.+ +..          +         ..|.+.    
T Consensus       157 gl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd~----  228 (415)
T 1tqy_B          157 GMRG-P--SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFDE----  228 (415)
T ss_dssp             TCCS-S--CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTST----
T ss_pred             CCCC-c--eEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCCC----
Confidence            9986 3  7899999999999999999999999 999999999983 210          0         112221    


Q ss_pred             hhhhhhhccCcEEEEEccCCCCC-CCC-CCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHH
Q 044410          216 LVVQAVFGDGAGAAIIGADSDIS-NHE-SPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSN  293 (402)
Q Consensus       216 ~~~~~lfGDGAaA~vL~~~~~~~-~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~  293 (402)
                      ....+++||||+|+||++.+... ... ....++.+.+...              ++..++ .+..      ...+++++
T Consensus       229 ~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~--------------dg~~~~-~p~~------~~~~ai~~  287 (415)
T 1tqy_B          229 RAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTF--------------DPAPGS-GRPA------GLERAIRL  287 (415)
T ss_dssp             TCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEE--------------CCCTTC-CCCC------SHHHHHHH
T ss_pred             CCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEcc--------------CCCCCC-CCCH------HHHHHHHH
Confidence            12367999999999998754200 001 1234454433211              111000 1111      35678899


Q ss_pred             hhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcc
Q 044410          294 AMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA  367 (402)
Q Consensus       294 ~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i  367 (402)
                      +|+++|+++ +|| ++.+|..+..+-+.     +.+.++-..  ++.+ ..-..+||+.+|+-.+.+..++.. +.++.+
T Consensus       288 al~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~--~~v~-s~K~~~GH~~gAaG~~~~~~~~~~-l~~~~i  362 (415)
T 1tqy_B          288 ALNDAGTGP-EDVDVVFADGAGVPELDAAEARAIGRVFGREG--VPVT-VPKTTTGRLYSGGGPLDVVTALMS-LREGVI  362 (415)
T ss_dssp             HHHHHTCCG-GGCCEEECCCCCSHHHHHHHHHHHHHHHCTTC--SEEE-CGGGGTCBCGGGHHHHHHHHHHHH-HHHTSB
T ss_pred             HHHHcCCCH-hHCCEEEEeCCCCcCcCHHHHHHHHHHhCCCC--ceEe-ccchhhccChHHHHHHHHHHHHHH-HhcCCc
Confidence            999999997 999 99999888765443     344454321  1111 013358999999877776655532 111221


Q ss_pred             c-----------------CC----CCCceEEEEEEcccccceeeEEee
Q 044410          368 T-----------------TG----EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       368 ~-----------------~G----~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .                 +.    .+..+++..+||.|.+-++++|+.
T Consensus       363 pp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfgG~n~~~vl~~  410 (415)
T 1tqy_B          363 APTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR  410 (415)
T ss_dssp             CCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred             CCCCCCCCCCCCCCccccCCCCccCCCCEEEEecCcCCCeEEEEEEec
Confidence            1                 00    012688999999999989999875

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=99.79  E-value=7.2e-18  Score=167.86  Aligned_cols=264  Identities=13%  Similarity=0.098  Sum_probs=177.5

Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCC-CCCCcc----EEEEEecCC---------------------------CCCCC
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQ-PVSKIT----HLIFSAFYG---------------------------VDMPG  146 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~-~~~dId----~li~~s~~~---------------------------~~~p~  146 (402)
                      ..+..+..+....|+.+|+++||+++|+ ++++||    .|+++++..                           ...+.
T Consensus        67 ~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (412)
T 4ewg_A           67 PRKKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHT  146 (412)
T ss_dssp             CHHHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTH
T ss_pred             CHHHHhhCCHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccH
Confidence            3444445566889999999999999999 788888    888887642                           12346


Q ss_pred             HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----c-----C-----------
Q 044410          147 ADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F-----H-----------  206 (402)
Q Consensus       147 ~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----~-----~-----------  206 (402)
                      .+.+|+..||++. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.++..    |     .           
T Consensus       147 ~a~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~  223 (412)
T 4ewg_A          147 TAVNVSLFWDLKG-R--IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTP  223 (412)
T ss_dssp             HHHHHHHHTTCCS-C--EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCC
T ss_pred             HHHHHHHHhCCCC-C--cccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCC
Confidence            7899999999986 3  78899999999999999999999999999999999986521    0     0           


Q ss_pred             CCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHH
Q 044410          207 EPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGN  285 (402)
Q Consensus       207 ~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~  285 (402)
                      .|.+    .....+++||||+|+||++.+... .......++.+.+...              ++.+++ .+     ...
T Consensus       224 rpfd----~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~--------------dg~~~~-~p-----~~~  279 (412)
T 4ewg_A          224 RPFD----AKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNS--------------DGAHMT-QP-----TAS  279 (412)
T ss_dssp             CTTB----TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CSSCSS-SC-----CHH
T ss_pred             CCCC----CCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcC--------------CCCCCC-CC-----CHH
Confidence            0112    112467899999999998743200 0011234454433211              111000 11     134


Q ss_pred             hHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410          286 YVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       286 ~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~  359 (402)
                      ....+++++|+++|+++ +|| ++.+|..+..+-+.     +.+.++-.   ++.+ .+-..+||+.+|+-.+.+..++.
T Consensus       280 ~~~~ai~~Al~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~---~~v~-s~K~~~GH~~gAsG~~~~~~~~~  354 (412)
T 4ewg_A          280 TMARAMQLALEDAKLDA-NAIAYVNAHGTSTDRGDVAESQATARTFGER---MPIS-SLKSYVGHTLGACGALEAWWTIE  354 (412)
T ss_dssp             HHHHHHHHHHHHTTCCG-GGEEEEECCCCCCHHHHHHHHHHHHHHHCTT---CEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCH-HHCCEEEccCCCCccccHHHHHHHHHHcCCC---Ceee-CccccccccHHHHHHHHHHHHHH
Confidence            56788999999999998 999 99999988776553     34555522   2211 02345799999986665554443


Q ss_pred             hhhhhhcccC---------C-------------CCCceEEEEEEcccccceeeEEeee
Q 044410          360 KSIEEMKATT---------G-------------EGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       360 ~~~~~g~i~~---------G-------------~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      . +.++.+.|         .             .+.++++.-+||-|.+-++++|+..
T Consensus       355 ~-l~~~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~~  411 (412)
T 4ewg_A          355 M-MKRNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRRV  411 (412)
T ss_dssp             H-HHHTEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEECC
T ss_pred             H-HhcCCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEeeC
Confidence            2 11122211         0             0126788999999999999999853

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=99.79  E-value=6.4e-18  Score=170.09  Aligned_cols=267  Identities=13%  Similarity=0.084  Sum_probs=176.4

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCc-c----EEEEEecCC---------------------------CCCCCH
Q 044410          100 ARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI-T----HLIFSAFYG---------------------------VDMPGA  147 (402)
Q Consensus       100 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dI-d----~li~~s~~~---------------------------~~~p~~  147 (402)
                      .+.....+....|+.+|+++||+++|+++++| |    .|+++++..                           ...+..
T Consensus        93 ~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (451)
T 4ddo_A           93 HKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLA  172 (451)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHH
T ss_pred             HHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchH
Confidence            34444445678999999999999999999999 7    678777521                           133457


Q ss_pred             HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------------------c
Q 044410          148 DVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------------------F  205 (402)
Q Consensus       148 a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------------------~  205 (402)
                      +.+|+..||+.. +  .++++.+|+|++.||..|.++|++|.++.|||+++|.++..                      .
T Consensus       173 a~~ia~~lgl~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~  249 (451)
T 4ddo_A          173 AGQISIKHRFRG-P--LGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRA  249 (451)
T ss_dssp             HHHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGS
T ss_pred             HHHHHHHhcCCC-c--eeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCcccc
Confidence            899999999986 3  78999999999999999999999999999999999986421                      0


Q ss_pred             CCCCccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHH
Q 044410          206 HEPSETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIG  284 (402)
Q Consensus       206 ~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~  284 (402)
                      ..|.+.+    ...+++||||+|+||++.+... ........+.+.+....+..   +           .....    ..
T Consensus       250 ~~pfd~~----~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~-----------~~~~~----~~  307 (451)
T 4ddo_A          250 SRPFDRD----RDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYH---M-----------TAGPD----DG  307 (451)
T ss_dssp             CCTTBTT----CCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSC---S-----------SCCCT----TC
T ss_pred             ccccccC----CCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCc---c-----------CCCCC----CH
Confidence            1122211    2367899999999998743200 00112345554433211100   0           00000    01


Q ss_pred             HhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHH
Q 044410          285 NYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVR  358 (402)
Q Consensus       285 ~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~  358 (402)
                      .....+++++|+++|+++ +|| ++.+|..+..+.+     .+.+.++.. .+++.+ ..-..+||+.+|+-.+.|..++
T Consensus       308 ~~~~~ai~~al~~Agl~~-~dId~ve~Hgtgt~~~d~~E~~al~~~~~~~-~~~~v~-s~k~~~GH~~gAaG~~~~i~~~  384 (451)
T 4ddo_A          308 SGAMRAMKLALRMGDVAP-EQVDYVNAHATSTPVGDAGEIEALKTVFGVG-AGPAIS-STKSATGHLLGAAGAIEAAFSI  384 (451)
T ss_dssp             HHHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHCSS-SSCEEE-CTHHHHCBCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCH-HHcCEEEecCCcCcccCHHHHHHHHHHhCCC-CCCccc-CchhhhccCHHHHHHHHHHHHH
Confidence            234578899999999997 999 9999987766543     344555542 222211 1244679999998766665544


Q ss_pred             HhhhhhhcccC------------------C----CCCceEEEEEEcccccceeeEEeee
Q 044410          359 KKSIEEMKATT------------------G----EGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       359 ~~~~~~g~i~~------------------G----~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      .. +.++.+.|                  .    .+..+++.-+||-|.+-++++|+..
T Consensus       385 ~~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~  442 (451)
T 4ddo_A          385 LA-LRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRY  442 (451)
T ss_dssp             HH-HHHTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEES
T ss_pred             HH-HhcCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeC
Confidence            32 11132211                  0    0125678889999999999999864

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.78  E-value=1.7e-18  Score=170.95  Aligned_cols=227  Identities=14%  Similarity=0.059  Sum_probs=160.3

Q ss_pred             hHHHHHHHHHHHHHHHc-CCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEW-GQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      +..+|+.+|+++||+++ |++++|||.|++++.++ .. .|..+.+++..+|++.... +++++.+|+|++.||.+|.++
T Consensus        26 ~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~v~~aCss~l~Al~~A~~~  104 (387)
T 3goa_A           26 RAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVP-AVTVNRLCGSSMQALHDAARM  104 (387)
T ss_dssp             CHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSC-CEEEECGGGHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCc-EeEecCcchHHHHHHHHHHHH
Confidence            37899999999999999 99999999999999887 43 7889999999999974332 899999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCccc-c----------------------------------------------------------
Q 044410          185 AENNPGARVLVVCSDIRVLD-F----------------------------------------------------------  205 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~~-~----------------------------------------------------------  205 (402)
                      |++|.++.|||+++|++|.. +                                                          
T Consensus       105 I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~  184 (387)
T 3goa_A          105 IMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGA  184 (387)
T ss_dssp             HHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCC
Confidence            99999999999999988741 1                                                          


Q ss_pred             -CC---C---------------Ccc-----------------ch----hhhhhhhhhccCcEEEEEccCCCCCC-CCCCc
Q 044410          206 -HE---P---------------SET-----------------HL----DVLVVQAVFGDGAGAAIIGADSDISN-HESPL  244 (402)
Q Consensus       206 -~~---~---------------~~~-----------------~~----~~~~~~~lfGDGAaA~vL~~~~~~~~-~~~~~  244 (402)
                       ..   |               ++.                 ++    -........+|||+|+||.+.+.... ...+.
T Consensus       185 f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~  264 (387)
T 3goa_A          185 FKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPR  264 (387)
T ss_dssp             TTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCC
T ss_pred             cccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCcc
Confidence             00   0               000                 00    00012345789999999987542000 01123


Q ss_pred             eEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHH
Q 044410          245 FQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEK  323 (402)
Q Consensus       245 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~  323 (402)
                      ..+.+.+....                    ++...   ......+++++|+++|+++ +|| ++-+|...........+
T Consensus       265 a~i~g~~~~~~--------------------~~~~~---~~~~~~a~~~al~~agl~~-~did~ve~h~~f~~~~~~~~~  320 (387)
T 3goa_A          265 ARIRSMAVVGC--------------------DPSIM---GYGPVPASKLALKKAGLSA-SDIDVFEMNEAFAAQILPCIK  320 (387)
T ss_dssp             EEEEEEEEEEC--------------------CTTST---TCTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHH
T ss_pred             EEEEEEEEcCC--------------------CCCcc---hHHHHHHHHHHHHHcCCCH-HHcCEEEEeCcchHHHHHHHH
Confidence            45554332211                    00000   0122467889999999997 999 99999998887777889


Q ss_pred             HcCC---CccccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410          324 TLGL---RKEKLWASRYVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       324 ~lgi---~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      .||+   +.+++..+ -....+||+.+|+-...+.+++..
T Consensus       321 ~lg~~~~~~~~vn~~-gg~~~~GH~~gasG~~~~~~~~~~  359 (387)
T 3goa_A          321 DLGLMEQIDEKINLN-GGAIALGHPLGCSGARISTTLINL  359 (387)
T ss_dssp             HTTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred             HhCCCcCCCccCCCC-CchhcccCCHHHHHHHHHHHHHHH
Confidence            9999   55555432 113358999777766666555543

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.77  E-value=4.8e-18  Score=168.09  Aligned_cols=252  Identities=16%  Similarity=0.100  Sum_probs=176.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      ..+|+.+|+++||+++|+++++||.+++++..+ ...+..+.+++..+|+++.. +.+.++.+|++++.||..|.+.|++
T Consensus        27 ~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~-p~~~v~~aCaSgl~Al~~A~~~I~~  105 (392)
T 2vu1_A           27 AHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEA-TAWGMNQLCGSGLRAVALGMQQIAT  105 (392)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS-EEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCc-eEEEecccchHHHHHHHHHHHHHHC
Confidence            789999999999999999999999999998877 55678999999999998522 2788999999999999999999999


Q ss_pred             CCCCeEEEEEeccCcc-ccC-------CC-----Ccc----------------------------chh------------
Q 044410          188 NPGARVLVVCSDIRVL-DFH-------EP-----SET----------------------------HLD------------  214 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~-~~~-------~~-----~~~----------------------------~~~------------  214 (402)
                      |..+.|||+++|.++. .+.       ..     .+.                            +++            
T Consensus       106 G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~  185 (392)
T 2vu1_A          106 GDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNK  185 (392)
T ss_dssp             TSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            9999999999998763 110       00     000                            000            


Q ss_pred             ------------------------------h---h----------------hhhhh-------hccCcEEEEEccCCCCC
Q 044410          215 ------------------------------V---L----------------VVQAV-------FGDGAGAAIIGADSDIS  238 (402)
Q Consensus       215 ------------------------------~---~----------------~~~~l-------fGDGAaA~vL~~~~~~~  238 (402)
                                                    +   +                ...++       +||||+|+||++.+...
T Consensus       186 A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~  265 (392)
T 2vu1_A          186 AEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEAS  265 (392)
T ss_dssp             HHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHH
T ss_pred             HHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCCccChhheeeEecHHHHH
Confidence                                          0   0                01346       99999999998754310


Q ss_pred             C-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHH
Q 044410          239 N-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDG  316 (402)
Q Consensus       239 ~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~  316 (402)
                      . ...+..++.+.+....                    .+..+   ......+++++|+++|+++ +|| +|-+|-....
T Consensus       266 ~~g~~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~agl~~-~dId~ie~~d~f~~  321 (392)
T 2vu1_A          266 RRGIQPLGRIVSWATVGV--------------------DPKVM---GTGPIPASRKALERAGWKI-GDLDLVEANEAFAA  321 (392)
T ss_dssp             HHTCCCSEEEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHH
T ss_pred             hcCCCccEEEEEEEEeec--------------------Chhhc---chhHHHHHHHHHHHcCCCH-HHcCEEEeccccHH
Confidence            0 0112355554433210                    00100   1233568889999999997 999 9999988776


Q ss_pred             HHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEE-EcccccceeeEEee
Q 044410          317 LLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFG-FGPGLTVETVVLQS  394 (402)
Q Consensus       317 ~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~-~G~G~~~~~~ll~~  394 (402)
                      ..-.+.+.||++++++..+ .....+||+.+|+-...+.+++....  +  +.+   .+.|... .| |....+++++.
T Consensus       322 ~~l~~~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~g-gG~~~a~~~e~  391 (392)
T 2vu1_A          322 QACAVNKDLGWDPSIVNVN-GGAIAIGHPIGASGARILNTLLFEMK--R--RGA---RKGLATLCIG-GGMGVAMCIES  391 (392)
T ss_dssp             HHHHHHHHHCCCGGGBSTT-CCHHHHCCCGGGHHHHHHHHHHHHHH--H--HTC---SEEEEEEEET-TTEEEEEEEEC
T ss_pred             HHHHHHHHcCCCcccCCCC-ccHhhhCCChhhHHHHHHHHHHHHHh--c--cCC---CEEEEEEecc-cchheEEEEEe
Confidence            6666789999998877543 23557999999988887777766411  1  123   4555433 45 44556777764

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.77  E-value=6.1e-18  Score=167.77  Aligned_cols=255  Identities=14%  Similarity=0.051  Sum_probs=173.3

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ++.+|+.+|+++||+++|+++++||.|+++++++ +. .|..+.+++..||++... ++++++.+|+|++.||..|.++|
T Consensus        25 ~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~-p~~~v~~aCas~~~Al~~A~~~I  103 (401)
T 1ulq_A           25 RPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV-AGCTVNRLCGSGLEAVAQAARAI  103 (401)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC-EEEEEECGGGHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc-cEeeccccchHHHHHHHHHHHHH
Confidence            3789999999999999999999999999998887 44 688999999999996322 28999999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc-ccCCC--------C-----c--------cch--h---------------------------
Q 044410          186 ENNPGARVLVVCSDIRVL-DFHEP--------S-----E--------THL--D---------------------------  214 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~-~~~~~--------~-----~--------~~~--~---------------------------  214 (402)
                      ++|..+.|||+++|.++. .+...        .     +        ...  +                           
T Consensus       104 ~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~  183 (401)
T 1ulq_A          104 WAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDR  183 (401)
T ss_dssp             HTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHH
T ss_pred             HCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHHHHHhCCCHHHHHH
Confidence            999999999999998764 11000        0     0        000  0                           


Q ss_pred             -----------h------------------------------------------hh-h---hhh-------hccCcEEEE
Q 044410          215 -----------V------------------------------------------LV-V---QAV-------FGDGAGAAI  230 (402)
Q Consensus       215 -----------~------------------------------------------~~-~---~~l-------fGDGAaA~v  230 (402)
                                 +                                          +. .   .++       ++|||+|+|
T Consensus       184 ~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~~G~vt~~~~~~~~dGAaavv  263 (401)
T 1ulq_A          184 FALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVL  263 (401)
T ss_dssp             HHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTCSCBGGGBCCCEEEEEEEE
T ss_pred             HHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCCCCCeechhcCCccchheEEE
Confidence                       0                                          00 0   012       599999999


Q ss_pred             EccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EE
Q 044410          231 IGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FY  308 (402)
Q Consensus       231 L~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~  308 (402)
                      |.+.+... ....+..++.+.+....                    .+..+   ......+++++|+++|+++ +|| ++
T Consensus       264 L~s~~~A~~~g~~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~i  319 (401)
T 1ulq_A          264 LVSDDYAKAHGLRPLARVRAIAVAGV--------------------PPRIM---GIGPVPATRKALERAGLSF-SDLGLI  319 (401)
T ss_dssp             EEEHHHHHHTTCCCSEEEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHTTCCG-GGCSEE
T ss_pred             EecHHHHHHcCCCceEEEEEEEEecC--------------------Ccccc---chhHHHHHHHHHHHcCCCH-HHcCEE
Confidence            98654310 00122345554433210                    01111   1123468889999999997 999 99


Q ss_pred             EEcCCCHHHHHHHHHHcCC--CccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEccccc
Q 044410          309 VVHPGGDGLLDQVEKTLGL--RKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLT  386 (402)
Q Consensus       309 i~H~~~~~~~~~~~~~lgi--~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~  386 (402)
                      -.|-......-...+.||+  +.+++..+ --...+||+.+|+-...+.+++....  +  +.+   ++.|..++|.|..
T Consensus       320 e~heafa~~~l~~~~~lg~~~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~  391 (401)
T 1ulq_A          320 ELNEAFAAQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHEMR--R--RKV---QFGLATMCIGVGQ  391 (401)
T ss_dssp             EECCSBHHHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--TTC---SEEEEEEEETTTE
T ss_pred             EEecchHHHHHHHHHHcCCCCCCCccCCC-CcccccCCCcchHHHHHHHHHHHHHh--h--cCC---CEEEEEeecCCcc
Confidence            9997765433334567898  55555432 12345899998877776666665411  1  123   6777777777777


Q ss_pred             ceeeEEeee
Q 044410          387 VETVVLQSV  395 (402)
Q Consensus       387 ~~~~ll~~~  395 (402)
                      ..+++|+..
T Consensus       392 ~~a~v~~~~  400 (401)
T 1ulq_A          392 GIAVVVEGM  400 (401)
T ss_dssp             EEEEEEEEC
T ss_pred             cEEEEEEeC
Confidence            778888763

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.77  E-value=7.7e-18  Score=166.84  Aligned_cols=253  Identities=18%  Similarity=0.098  Sum_probs=176.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAEN  187 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~  187 (402)
                      ..+|+.+|+++||+++|+++++||.++++++.+ +..+..+.+++..||++... +.+.++.+|++++.||..|.++|++
T Consensus        30 ~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~-p~~~v~~aCaSg~~Ai~~A~~~I~~  108 (397)
T 1wl4_A           30 VQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSV-PAWSCQMICGSGLKAVCLAVQSIGI  108 (397)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS-CEEEECCGGGHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCc-cEEEecCcChhHHHHHHHHHHHHHC
Confidence            789999999999999999999999999998877 55688999999999995322 2789999999999999999999999


Q ss_pred             CCCCeEEEEEeccCccc-cCC-----------------------------------------------------------
Q 044410          188 NPGARVLVVCSDIRVLD-FHE-----------------------------------------------------------  207 (402)
Q Consensus       188 g~~~~vLvv~~e~~s~~-~~~-----------------------------------------------------------  207 (402)
                      |..+.||++++|.++.. +..                                                           
T Consensus       109 G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~  188 (397)
T 1wl4_A          109 GDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNR  188 (397)
T ss_dssp             TSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence            99999999999987631 100                                                           


Q ss_pred             -----------------------------CCccch---------hhh--h-h---hhh-------hccCcEEEEEccCCC
Q 044410          208 -----------------------------PSETHL---------DVL--V-V---QAV-------FGDGAGAAIIGADSD  236 (402)
Q Consensus       208 -----------------------------~~~~~~---------~~~--~-~---~~l-------fGDGAaA~vL~~~~~  236 (402)
                                                   +++.-+         ..+  . .   .++       +||||+|+||++.+.
T Consensus       189 A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~  268 (397)
T 1wl4_A          189 TENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSE  268 (397)
T ss_dssp             HHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHH
T ss_pred             HHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHH
Confidence                                         000000         000  0 0   235       899999999986543


Q ss_pred             CCC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCC
Q 044410          237 ISN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGG  314 (402)
Q Consensus       237 ~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~  314 (402)
                      ... ...+..++.+.+....                    .+..   .......+++++|+++|+++ +|| +|-.|...
T Consensus       269 A~~~g~~~~a~i~g~~~~~~--------------------~p~~---~~~~~~~a~~~al~~Agl~~-~dId~ie~~d~f  324 (397)
T 1wl4_A          269 ADKRGLTPLARIVSWSQVGV--------------------EPSI---MGIGPIPAIKQAVTKAGWSL-EDVDIFEINEAF  324 (397)
T ss_dssp             HHHTTCCCSEEEEEEEEEEC--------------------CGGG---GGGTHHHHHHHHHHHHTCCG-GGCCEEEECCSB
T ss_pred             HHHcCCCccEEEEEEEEeec--------------------Chhh---ccchHHHHHHHHHHHcCCCH-HHCCEEEEeccc
Confidence            100 0122355554433210                    0000   01233568889999999997 999 99999988


Q ss_pred             HHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          315 DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       315 ~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      ......+.+.||++++++..+ .....+||+.+|+-...+.+++....  +  +.+   .+.|....+.|....+++|+.
T Consensus       325 ~~~~l~~~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~e~  396 (397)
T 1wl4_A          325 AAVSAAIVKELGLNPEKVNIE-GGAIALGHPLGASGCRILVTLLHTLE--R--MGR---SRGVAALCIGGGMGIAMCVQR  396 (397)
T ss_dssp             HHHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---CEEEEEEEETTTEEEEEEEEE
T ss_pred             HHHHHHHHHHcCCCCcCcCCC-cCccccCCChhhhHHHHHHHHHHHHh--h--cCC---CEEEEEEecccchheEEEEEe
Confidence            776677889999988777543 23567899999886666666555311  1  123   555655444445556788875

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=99.75  E-value=2.4e-17  Score=164.83  Aligned_cols=320  Identities=12%  Similarity=0.055  Sum_probs=196.6

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      |.|+|+|...|.- .+.+++.+.+..  ......++.   .  +...++..+....++..    +  ..+    +..+..
T Consensus        25 V~ItG~g~~~p~g-~~~~~~w~~l~~--g~~~i~~~~---~--~~~~~~~~~~~g~~~fd----~--~~~----i~~~~~   86 (428)
T 3mqd_A           25 VVVTGMGIVSSIG-SNTEEVTASLRE--AKSGISRAE---E--YAELGFRCQVHGAPDID----I--ESL----VDRRAM   86 (428)
T ss_dssp             EEEEEEEEEBTTB-SSHHHHHHHHHH--TCCCEEECH---H--HHHTTCSCCEEECCCCC----H--HHH----SCTGGG
T ss_pred             EEEEeeEEECCCc-CCHHHHHHHHHc--CCCcceeCC---c--ccccCCCcccccccCCC----h--hhc----CCHHHH
Confidence            8999999999986 577777766532  111111110   1  12223333321110000    0  000    001111


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-CC--------------------------CCCHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-VD--------------------------MPGADVRLM  152 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~~--------------------------~p~~a~~i~  152 (402)
                      ...+...+|+.+|+++||+++|+++++||    .|+++++.+ +.                          .+..+.+|+
T Consensus        87 ~~~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia  166 (428)
T 3mqd_A           87 RFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLA  166 (428)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHH
T ss_pred             hhCCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHH
Confidence            12234789999999999999999999998    688887643 11                          345789999


Q ss_pred             HHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcccc---------------------CCCCcc
Q 044410          153 RLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF---------------------HEPSET  211 (402)
Q Consensus       153 ~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~---------------------~~~~~~  211 (402)
                      ..||+.. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.++...                     ..|.+.
T Consensus       167 ~~lgl~g-p--~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~  243 (428)
T 3mqd_A          167 TFFKIKG-I--NYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDK  243 (428)
T ss_dssp             HHTTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBT
T ss_pred             HHcCCCC-c--eeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCcccC
Confidence            9999986 3  789999999999999999999999999999999999875210                     011221


Q ss_pred             chhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHH
Q 044410          212 HLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKC  290 (402)
Q Consensus       212 ~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~  290 (402)
                          ....+++||||+|+||++.+... .......++.+.+...              ++..+. .+     .......+
T Consensus       244 ----~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------dg~~~~-~P-----~~~~~~~a  299 (428)
T 3mqd_A          244 ----NRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATS--------------DGYDMV-AP-----SGEGAIRC  299 (428)
T ss_dssp             ----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCSS-SC-----CSHHHHHH
T ss_pred             ----CCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcC--------------CCCCCC-CC-----CHHHHHHH
Confidence                12467899999999998753200 0011234555433221              110000 01     12235578


Q ss_pred             HHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410          291 LSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE  364 (402)
Q Consensus       291 i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~  364 (402)
                      ++++|+  |++  +|| ++..|-.+..+-|.     +.+.++....+.+.+ ..-..+||+.+|+-.+.|-.++.. +.+
T Consensus       300 i~~Al~--gl~--~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~-s~K~~~GH~~gAsG~~~~i~~~~~-l~~  373 (428)
T 3mqd_A          300 MKMALS--TVT--SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIA-ATKSLTGHSLGATGVQEAIYSLLM-MQN  373 (428)
T ss_dssp             HHHHHT--TCC--SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBC-CTHHHHCBCGGGHHHHHHHHHHHH-HHH
T ss_pred             HHHHHh--CCc--cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceee-cchhhhcccHHHHHHHHHHHHHHH-HHh
Confidence            888998  887  778 99999887765544     455666433322221 123457999999876665544332 111


Q ss_pred             hcccC----------------------CCCCceEEEEEEcccccceeeEEee
Q 044410          365 MKATT----------------------GEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       365 g~i~~----------------------G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +.+.|                      ..+..+++.-+||-|.+-++++|+.
T Consensus       374 ~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~  425 (428)
T 3mqd_A          374 NFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQR  425 (428)
T ss_dssp             TEECCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEEC
T ss_pred             CCcCCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEee
Confidence            32221                      0112678889999999999999875

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=99.75  E-value=1.2e-17  Score=167.11  Aligned_cols=264  Identities=13%  Similarity=0.068  Sum_probs=171.5

Q ss_pred             hhHHHHHHHHHHHHHHHcCC-CCCCcc----EEEEEecCCC------------------CC---------CCHHHHHHHH
Q 044410          107 DEVPKLGKEAALKAIKEWGQ-PVSKIT----HLIFSAFYGV------------------DM---------PGADVRLMRL  154 (402)
Q Consensus       107 ~~~~~la~~Aa~~aL~~ag~-~~~dId----~li~~s~~~~------------------~~---------p~~a~~i~~~  154 (402)
                      +...+|+.+|+++||+++|+ ++++||    .|+++++.+.                  ..         ...+.+|+..
T Consensus        86 d~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~  165 (431)
T 2ix4_A           86 ANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMK  165 (431)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHH
Confidence            34679999999999999999 998888    5777765321                  11         2478999999


Q ss_pred             cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcccc----------CC------CCccc--hhhh
Q 044410          155 LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF----------HE------PSETH--LDVL  216 (402)
Q Consensus       155 LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~----------~~------~~~~~--~~~~  216 (402)
                      ||++. +  .+.++.+|+|++.||..|.++|++|.++.|||+++|.++...          ..      |+...  .+..
T Consensus       166 lgl~g-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~  242 (431)
T 2ix4_A          166 YGFQG-P--NHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCD  242 (431)
T ss_dssp             HTCCS-C--EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTT
T ss_pred             HCCCC-c--eeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCC
Confidence            99986 3  789999999999999999999999999999999999764210          00      00000  0011


Q ss_pred             hhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhh
Q 044410          217 VVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAM  295 (402)
Q Consensus       217 ~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L  295 (402)
                      ...+++||||+|+||++.+... .......++.+.+....              +..+. .+..   .......+++++|
T Consensus       243 ~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d--------------g~~~~-~p~~---~~~~~~~ai~~al  304 (431)
T 2ix4_A          243 RDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGD--------------AHHIT-QPPE---DGKGAVLAMTRAL  304 (431)
T ss_dssp             CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC--------------CSCSS-CCCT---TCHHHHHHHHHHH
T ss_pred             CCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCC--------------CCCCC-CCCC---CHHHHHHHHHHHH
Confidence            2467899999999998754200 00112234444322111              00000 0000   1234567889999


Q ss_pred             ccCCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCc--cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcc
Q 044410          296 SPIGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRK--EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA  367 (402)
Q Consensus       296 ~~~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~--ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i  367 (402)
                      +++|+++ +|| ++.+|..+..+.+     .+.+.++...  ++++.+ .....+||+.+|+-.+.|..++.. +..+.+
T Consensus       305 ~~agl~~-~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~-l~~~~i  381 (431)
T 2ix4_A          305 RQSGLCP-NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS-STKGATGHLLGAAGAVEAIFSILA-IHHGVA  381 (431)
T ss_dssp             HHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEE
T ss_pred             HHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceee-cchhhhcccHHHHHHHHHHHHHHH-HhcCCc
Confidence            9999997 999 9999988766543     3444444221  233321 124589999999977776665542 111332


Q ss_pred             cC-------------------CC---CCceEEEEEEcccccceeeEEee
Q 044410          368 TT-------------------GE---GLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       368 ~~-------------------G~---~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .|                   ..   +..+++.-+||.|.+-..++|+.
T Consensus       382 pp~~~~~~~~p~~~~~~v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~  430 (431)
T 2ix4_A          382 PMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS  430 (431)
T ss_dssp             CCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred             CCCCCCCCCCCCCCcccCCccccccCCCCEEEEecccCCCeeEEEEEee
Confidence            10                   00   12678889999999988888873

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.75  E-value=1.8e-17  Score=164.11  Aligned_cols=249  Identities=15%  Similarity=0.105  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCC-CccccceeeccccchHHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLK-PSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~-~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      ..+|+.+|+++||+++|+++++||.+++++..+ ...+..+.+++..||++ ..+  .++++.+|++++.||..|.++|+
T Consensus        32 ~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p--~~~v~~aCaS~~~Al~~A~~~I~  109 (395)
T 2ib8_A           32 ATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTP--CTTINKVCASGMKAIMMASQSLM  109 (395)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCC--EEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCce--EEEecccccHHHHHHHHHHHHHH
Confidence            778999999999999999999999999998877 66788999999999995 333  78999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCccc-c---------C-----------CC---C-------------c-c--chhh-----------
Q 044410          187 NNPGARVLVVCSDIRVLD-F---------H-----------EP---S-------------E-T--HLDV-----------  215 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~~-~---------~-----------~~---~-------------~-~--~~~~-----------  215 (402)
                      +|.++.|||+++|.++.. +         .           ..   .             . .  ++++           
T Consensus       110 ~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~  189 (395)
T 2ib8_A          110 CGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTR  189 (395)
T ss_dssp             TTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence            999999999999986531 1         0           00   0             0 0  0000           


Q ss_pred             ---------------------------------------------------hhhhhh-------hccCcEEEEEccCCCC
Q 044410          216 ---------------------------------------------------LVVQAV-------FGDGAGAAIIGADSDI  237 (402)
Q Consensus       216 ---------------------------------------------------~~~~~l-------fGDGAaA~vL~~~~~~  237 (402)
                                                                         ....++       .||||+|+||.+.+..
T Consensus       190 a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A  269 (395)
T 2ib8_A          190 SKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAA  269 (395)
T ss_dssp             HHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHH
T ss_pred             HHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHHH
Confidence                                                               001334       8999999999875431


Q ss_pred             CC-CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCH
Q 044410          238 SN-HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGD  315 (402)
Q Consensus       238 ~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~  315 (402)
                      .. ...+..++.+.+...   +                 .+..+   ......+++++|+++|+++ +|| ++-.|-...
T Consensus       270 ~~~g~~~~a~I~g~~~~~---~-----------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ie~~D~f~  325 (395)
T 2ib8_A          270 KRLNVTPLARIVAFADAA---V-----------------EPIDF---PIAPVYAASMVLKDVGLKK-EDIAMWEVNEAFS  325 (395)
T ss_dssp             HHTTCCCCEEEEEEEEEE---C-----------------CGGGG---GGHHHHHHHHHHHHHTCCG-GGEEEEEECCSBH
T ss_pred             HhcCCCccEEEEEEEEec---c-----------------Chhhc---cccHHHHHHHHHHHcCCCH-HHcCEEEEccccH
Confidence            00 011234555443221   0                 00000   1123467889999999997 999 999998765


Q ss_pred             HHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEE-EEEcccccceeeEEee
Q 044410          316 GLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVL-FGFGPGLTVETVVLQS  394 (402)
Q Consensus       316 ~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll-~~~G~G~~~~~~ll~~  394 (402)
                      ...-...+.||++++++..+ -....+||+.+|+-...+.+++..      ++.|   ++.+. +..|.| ...+++|+.
T Consensus       326 ~~~l~~~e~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~------L~~~---~~gl~~~~~ggG-~g~a~~~~~  394 (395)
T 2ib8_A          326 LVVLANIKMLEIDPQKVNIN-GGAVSLGHPIGMSGARIVGHLTHA------LKQG---EYGLASICNGGG-GASAMLIQK  394 (395)
T ss_dssp             HHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHH------SCTT---CEEEEEEEETTT-EEEEEEEEE
T ss_pred             HHHHHHHHHcCCCccccCCC-cchhhcCCChhHHHHHHHHHHHHH------HhhC---CceEEEEecccC-HhheEEEEc
Confidence            55445566799988776542 235678999999988888888876      4445   56555 344444 445677764

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=99.74  E-value=1.4e-16  Score=158.58  Aligned_cols=329  Identities=12%  Similarity=0.084  Sum_probs=197.4

Q ss_pred             CCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHH
Q 044410           21 GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDA  100 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~  100 (402)
                      ++ |.|+|+|...|.- .+.+++.+.+..  ..+...++.   .|-.+..++..|.-. .-.   ..+.  .    -+..
T Consensus        12 ~~-vaI~G~g~~~p~g-~~~~~~w~~l~~--g~~~i~~~~---~~~~~~~~~~~~~~~-~~~---~d~~--~----~~~~   74 (416)
T 2wge_A           12 PS-VVVTAVTATTSIS-PDIESTWKGLLA--GESGIHALE---DEFVTKWDLAVKIGG-HLK---DPVD--S----HMGR   74 (416)
T ss_dssp             CC-EEEEEEEEEESSC-SSHHHHHHHHHT--TCCCCEECC---CHHHHHHTCSCCEEB-CCS---SCGG--G----GCCH
T ss_pred             Cc-EEEEeeEEECCCC-CCHHHHHHHHHc--CCCEEEeCC---ccccccccCCccEEE-EeC---Cchh--h----hCCH
Confidence            45 8999999999997 577777766531  111100000   010001122222110 000   0000  0    0234


Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C-----------------CCC---------CHHH
Q 044410          101 RQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V-----------------DMP---------GADV  149 (402)
Q Consensus       101 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~-----------------~~p---------~~a~  149 (402)
                      +..+..+...+|+.+|+++||+++|+  +++|    .|+++++++ +                 ..|         ..+.
T Consensus        75 ~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~  152 (416)
T 2wge_A           75 LDMRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAA  152 (416)
T ss_dssp             HHHHHSCHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHH
Confidence            45555667889999999999999998  4455    377777654 3                 112         4688


Q ss_pred             HHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------cCC----CCccc--
Q 044410          150 RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------FHE----PSETH--  212 (402)
Q Consensus       150 ~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~~----~~~~~--  212 (402)
                      +|+..||++. +  .++++.+|+|++.||..|.++|++|.++.+||+++|.++..           +..    |+...  
T Consensus       153 ~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p  229 (416)
T 2wge_A          153 VIGLQLGARA-G--VMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRP  229 (416)
T ss_dssp             HHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCT
T ss_pred             HHHHHhccCC-C--cccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccc
Confidence            9999999985 3  78999999999999999999999999999999999986532           110    00000  


Q ss_pred             hhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410          213 LDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL  291 (402)
Q Consensus       213 ~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i  291 (402)
                      .+.....++|||||+|+||++.+... .......++.+.+...              ++..+. .+..   .......++
T Consensus       230 fd~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~--------------dg~~~~-~p~~---~~~~~~~ai  291 (416)
T 2wge_A          230 FDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITS--------------DAFHMV-APAA---DGVRAGRAM  291 (416)
T ss_dssp             TBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEE--------------CCSCSS-SCCT---TCHHHHHHH
T ss_pred             cccCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEec--------------CCCCcc-CCCC---ChHHHHHHH
Confidence            00112467999999999998654200 0011234454432211              010000 0100   123456788


Q ss_pred             HHhhccCCCCCCcce-EEEEcCCCHHHHHHHH----HHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410          292 SNAMSPIGISDWNSL-FYVVHPGGDGLLDQVE----KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK  366 (402)
Q Consensus       292 ~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~----~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~  366 (402)
                      +++|+++|+++ +|| ++.+|..+...-+.++    +.++..  +++.+ ..-..+||+.+|+-.+.|..++.. +.++.
T Consensus       292 ~~al~~agl~~-~dId~ve~HgtgT~~gD~~E~~al~~~~~~--~~~v~-s~k~~~GH~~gAsG~~~~i~~~l~-l~~~~  366 (416)
T 2wge_A          292 TRSLELAGLSP-ADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAVY-APKSALGHSIGAVGALESVLTVLT-LRDGV  366 (416)
T ss_dssp             HHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHTTCT--TSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTE
T ss_pred             HHHHHHcCCCH-HHCCEEEECCCCCcCCCHHHHHHHHHhccC--CCCcc-CCcccccCcHHHHHHHHHHHHHHH-HhcCC
Confidence            99999999997 999 9999988776655442    334431  22221 135578999999887766554432 11133


Q ss_pred             ccC---------------------CCCCceEEEEEEcccccceeeEEee
Q 044410          367 ATT---------------------GEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       367 i~~---------------------G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      +.|                     ..+..+++.-+||-|.+-.+++|+.
T Consensus       367 ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~  415 (416)
T 2wge_A          367 IPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR  415 (416)
T ss_dssp             ECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred             cCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence            211                     0012578889999999988888873

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=99.74  E-value=1.2e-16  Score=159.81  Aligned_cols=330  Identities=14%  Similarity=0.111  Sum_probs=197.9

Q ss_pred             CCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHH
Q 044410           21 GPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDA  100 (402)
Q Consensus        21 ~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~  100 (402)
                      ++ |.|+|+|...|.-. +.+++.+.+..  ..+...++.   .|-.+..++..|.-. .-.   ..+..      -+..
T Consensus        28 ~~-vaI~G~g~~~p~g~-~~~~~w~~l~~--g~~~i~~~~---~~~~~~~~~~~~~~~-~v~---~d~~~------~~~~   90 (434)
T 2gp6_A           28 PY-VVVTGIAMTTALAT-DAETTWKLLLD--RQSGIRTLD---DPFVEEFDLPVRIGG-HLL---EEFDH------QLTR   90 (434)
T ss_dssp             CC-EEEEEEEEECSSCS-SHHHHHHHHHT--TCCCEEECC---CHHHHHHCCSCCEEE-CCS---CCSTT------SSCH
T ss_pred             CC-EEEEeeEEeCCCCC-CHHHHHHHHHc--CCCeeeeCC---ccccccccCccceeE-EcC---Cchhh------hCCH
Confidence            35 99999999999874 77777666531  111100000   010001122222110 000   00100      1334


Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHcCCC---CCCccEEEEEecCC-C-----------------C--------CC-CHHHH
Q 044410          101 RQAMLIDEVPKLGKEAALKAIKEWGQP---VSKITHLIFSAFYG-V-----------------D--------MP-GADVR  150 (402)
Q Consensus       101 ~~~~~~~~~~~la~~Aa~~aL~~ag~~---~~dId~li~~s~~~-~-----------------~--------~p-~~a~~  150 (402)
                      +..+..+...+|+.+|+++||+++|++   +++|+ |+++++++ +                 .        .+ ..+.+
T Consensus        91 ~~~~~~d~~~~l~l~aa~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  169 (434)
T 2gp6_A           91 IELRRMGYLQRMSTVLSRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAA  169 (434)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHH
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHH
Confidence            445555667899999999999999984   45565 56666543 2                 1        12 46889


Q ss_pred             HHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------cCC-----CCccc--
Q 044410          151 LMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------FHE-----PSETH--  212 (402)
Q Consensus       151 i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~~-----~~~~~--  212 (402)
                      |+..||+.. +  .++++.+|+|++.||..|.++|++|.++.|||+++|..+..           ...     |+...  
T Consensus       170 is~~lgl~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~p  246 (434)
T 2gp6_A          170 VGLERHAKA-G--VMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRP  246 (434)
T ss_dssp             HHHHSCCCS-C--EECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCS
T ss_pred             HhhhhcCCC-C--eEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceec
Confidence            999999985 3  78999999999999999999999999999999999986531           111     11000  


Q ss_pred             hhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHH
Q 044410          213 LDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCL  291 (402)
Q Consensus       213 ~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i  291 (402)
                      .+.....+++||||+|+||++.+... .......++.+.+...              ++..+. .+..   ......+++
T Consensus       247 fd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------Dg~~~~-~p~~---~~~~~~~ai  308 (434)
T 2gp6_A          247 FDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITS--------------DGFHMV-APDP---NGERAGHAI  308 (434)
T ss_dssp             SBTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEE--------------CCSCSS-SCCT---TCHHHHHHH
T ss_pred             ccccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEec--------------CCCCCC-CCCC---ChHHHHHHH
Confidence            00112467999999999998653200 0011223444332211              110000 0000   123456789


Q ss_pred             HHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhh
Q 044410          292 SNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEM  365 (402)
Q Consensus       292 ~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g  365 (402)
                      +++|+++|+++ +|| ++.+|..+..+.+.     +.+.++-.  ++..+ .....+||+.+|+-.+.+..++.. +..+
T Consensus       309 ~~al~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~--~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~-l~~~  383 (434)
T 2gp6_A          309 TRAIQLAGLAP-GDIDHVNAHATGTQVGDLAEGRAINNALGGN--RPAVY-APKSALGHSVGAVGAVESILTVLA-LRDQ  383 (434)
T ss_dssp             HHHHHHTTCCT-TTEEEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEEC-CTHHHHCBCTTTHHHHHHHHHHHH-HHHS
T ss_pred             HHHHHHcCCCH-HHcCEEEEeCCcCccchHHHHHHHHHHhccC--CCCcc-cchhhhcCchhhhHHHHHHHHHHH-HhcC
Confidence            99999999998 999 99999877666433     34445422  22221 135679999999877776655442 1113


Q ss_pred             cccCC---------------------CCCceEEEEEEcccccceeeEEee
Q 044410          366 KATTG---------------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       366 ~i~~G---------------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .+.|-                     .+..+++.-+||.|.+-.+++|+.
T Consensus       384 ~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~  433 (434)
T 2gp6_A          384 VIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR  433 (434)
T ss_dssp             CCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred             ccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence            33210                     012578888999999988888874

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=99.73  E-value=5.6e-17  Score=161.09  Aligned_cols=318  Identities=14%  Similarity=0.108  Sum_probs=197.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      |.|+|+|...|.- .+.+++.+.+..  ......++.   .|  ...++..|... .-+ +  .+.  .    -+..+..
T Consensus         4 v~ItG~g~~~p~g-~~~~~~w~~l~~--g~~~i~~~~---~~--~~~~~~~~~~~-~v~-f--d~~--~----~~~~~~~   65 (406)
T 2vba_A            4 AVITGLGIVSSIG-NNQQEVLASLRE--GRSGITFSQ---EL--KDSGMRSHVWG-NVK-L--DTT--G----LIDRKVV   65 (406)
T ss_dssp             EEEEEEEEEBTTB-SSHHHHHHHHHH--TCCCEEECH---HH--HHTTCSCCEEE-CCC-C--CCT--T----SSCHHHH
T ss_pred             EEEEeeEEECCCC-CCHHHHHHHHHc--CCCeEEeCC---cc--cccCCccceEE-Eec-C--Chh--h----cCCHHHH
Confidence            8999999999987 577777666431  111111100   11  11222222111 000 0  000  0    0223333


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccE-----EEEEecCC-C---------------------------CCCCHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITH-----LIFSAFYG-V---------------------------DMPGADVR  150 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~-----li~~s~~~-~---------------------------~~p~~a~~  150 (402)
                      +..+...+|+.+|+++||+++|+++++||.     |+++++.+ +                           ..+..+.+
T Consensus        66 ~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  145 (406)
T 2vba_A           66 RFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSAC  145 (406)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHH
T ss_pred             HhcCHHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHH
Confidence            444557899999999999999999888875     88887654 2                           01357889


Q ss_pred             HHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------c-----------CCCC
Q 044410          151 LMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------F-----------HEPS  209 (402)
Q Consensus       151 i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~-----------~~~~  209 (402)
                      |+..||+.. +  .+.++.+|+|++.||..|.++|++|.++.+||+++|.++..          +           ..|.
T Consensus       146 is~~lgl~G-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~pf  222 (406)
T 2vba_A          146 LATPFKIHG-V--NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTY  222 (406)
T ss_dssp             HHTTTTCCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTT
T ss_pred             HHHhccCCC-c--eeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCcC
Confidence            999999986 3  78999999999999999999999999999999999986522          0           1122


Q ss_pred             ccchhhhhhhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHH
Q 044410          210 ETHLDVLVVQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVD  288 (402)
Q Consensus       210 ~~~~~~~~~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~  288 (402)
                      +.+    ...+++||||+|+||++.+... .......++.+.+....              +..++ .+.     .....
T Consensus       223 d~~----~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d--------------g~~~t-~p~-----~~~~~  278 (406)
T 2vba_A          223 DAH----RDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSD--------------GADMV-APS-----GEGAV  278 (406)
T ss_dssp             BTT----CCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC--------------CSCTT-SCC-----SHHHH
T ss_pred             cCC----CCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCC--------------CCCCC-CCC-----HHHHH
Confidence            211    1367899999999998754200 00112344554332211              10000 011     23456


Q ss_pred             HHHHHhhccCCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhh
Q 044410          289 KCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSI  362 (402)
Q Consensus       289 ~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~  362 (402)
                      .+++++|+++|    +|| ++..|..+..+-+     .+.+.+|...-.+- +  +-..+||+.+|+-.+.+..++.. +
T Consensus       279 ~ai~~al~~ag----~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~v~-s--~K~~~GH~~gAaG~~~~i~~~l~-l  350 (406)
T 2vba_A          279 RCMKMAMHGVD----TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAIS-A--TKAMTGHSLGAAGVQEAIYSLLM-L  350 (406)
T ss_dssp             HHHHHHHTTCC----SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEE-C--THHHHCBCGGGHHHHHHHHHHHH-H
T ss_pred             HHHHHHHhhCC----CCccEEEeeCccCcccCHHHHHHHHHHhCcCCCcee-C--chhhhcccHHHHHHHHHHHHHHH-H
Confidence            78899999998    567 9999998877643     45566664321222 1  24468999999887776655542 1


Q ss_pred             hhhcccC-----------C----------CCCceEEEEEEcccccceeeEEee
Q 044410          363 EEMKATT-----------G----------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       363 ~~g~i~~-----------G----------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      .++.+.|           +          .+..+++.-+||-|.+-..++|+.
T Consensus       351 ~~~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~  403 (406)
T 2vba_A          351 EHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK  403 (406)
T ss_dssp             HHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred             hcCccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEe
Confidence            1133211           0          012567889999999988888874

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.73  E-value=2.9e-17  Score=162.38  Aligned_cols=253  Identities=13%  Similarity=0.010  Sum_probs=172.8

Q ss_pred             HHHHHHHHHHHHHHHc-CCCCCCccEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEW-GQPVSKITHLIFSAFYG-VD-MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~a-g~~~~dId~li~~s~~~-~~-~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ..+|+.+|+++||+++ |+++++||.|+++++++ +. .+..+.+|+..||++.... .+.++.+|++++.||..|.++|
T Consensus        30 ~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p-~~~v~~aCaS~~~Al~~A~~~I  108 (390)
T 1wdk_C           30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSA-AQTVSRLCGSSMSALHTAAQAI  108 (390)
T ss_dssp             HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSE-EEEEECGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCcc-EEEEcccchhHHHHHHHHHHHH
Confidence            7899999999999999 99999999999998876 33 4788999999999954332 7889999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc-ccC-----CCCc-----------------------cchhh---------------------
Q 044410          186 ENNPGARVLVVCSDIRVL-DFH-----EPSE-----------------------THLDV---------------------  215 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~-~~~-----~~~~-----------------------~~~~~---------------------  215 (402)
                      ++|..+.|||+++|.++. .+.     ++..                       -++++                     
T Consensus       109 ~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~  188 (390)
T 1wdk_C          109 MTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKF  188 (390)
T ss_dssp             HTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             HcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            999999999999998753 110     1000                       00000                     


Q ss_pred             ------------------------------------------hhhhhh-------hccCcEEEEEccCCCCC-CCCCCce
Q 044410          216 ------------------------------------------LVVQAV-------FGDGAGAAIIGADSDIS-NHESPLF  245 (402)
Q Consensus       216 ------------------------------------------~~~~~l-------fGDGAaA~vL~~~~~~~-~~~~~~~  245 (402)
                                                                ....++       +||||+|+||.+.+... ....+..
T Consensus       189 ~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a  268 (390)
T 1wdk_C          189 KDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLA  268 (390)
T ss_dssp             TTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSE
T ss_pred             ccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccE
Confidence                                                      002336       99999999998754310 0011234


Q ss_pred             EEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHH
Q 044410          246 QILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKT  324 (402)
Q Consensus       246 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~  324 (402)
                      ++.+.+....                    .+..+   ......+++++|+++|+++ +|| ++-.|-........+.+.
T Consensus       269 ~I~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ve~~d~f~~~~~~~~~~  324 (390)
T 1wdk_C          269 VIRSMAVAGV--------------------DPAIM---GYGPVPATQKALKRAGLNM-ADIDFIELNEAFAAQALPVLKD  324 (390)
T ss_dssp             EEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHHTCCG-GGCCEEEECCSBHHHHHHHHHH
T ss_pred             EEEEEEEecc--------------------Chhhc---chhHHHHHHHHHHHcCCCh-hhCcEEEeccCCHHHHHHHHHH
Confidence            5554433210                    01100   1123468889999999997 999 999998877666677899


Q ss_pred             cCCC---ccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          325 LGLR---KEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       325 lgi~---~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      ||++   .+++..+ -..-.+||+.+|+-...+.+++....  +  +.+   .+.+....+.|....+++|+.
T Consensus       325 lg~~~~~~~~vn~~-gg~~~~GHp~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~~~  389 (390)
T 1wdk_C          325 LKVLDKMNEKVNLH-GGAIALGHPFGCSGARISGTLLNVMK--Q--NGG---TFGLSTMCIGLGQGIATVFER  389 (390)
T ss_dssp             TTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--TTC---SEEEEEEEETTTEEEEEEEEC
T ss_pred             cCCCCCCCCcCCCC-cCcccccCCcchhHHHHHHHHHHHHh--h--cCC---CEEEEEecccchheEEEEEEe
Confidence            9997   4455431 12457899999986666665555311  1  123   555554444444566777764

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.73  E-value=2.9e-17  Score=162.41  Aligned_cols=226  Identities=9%  Similarity=0.021  Sum_probs=159.5

Q ss_pred             hHHHHHHHHHHHHHHHcC----CCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCC-CccccceeeccccchHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWG----QPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLK-PSVNRLMIYTQGCYMGGTVIRLA  181 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag----~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~-~~~~~~~~i~~~C~~~~~al~~A  181 (402)
                      ++.+|+.+|+++||+++|    +++++||.|++++.++ +..|..+.+++..||++ ..+  +++++.+|++++.||..|
T Consensus        34 ~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p--~~~v~~aCasg~~Al~~A  111 (393)
T 1afw_A           34 NTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTP--FVALNRQCSSGLTAVNDI  111 (393)
T ss_dssp             CHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC--EEEEECGGGHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCce--EEEEcCcCHHHHHHHHHH
Confidence            378999999999999999    9999999999998877 55677899999999995 333  789999999999999999


Q ss_pred             HHHHHcCCCCeEEEEEeccCcc-ccC---------------C--------------------------------------
Q 044410          182 KDIAENNPGARVLVVCSDIRVL-DFH---------------E--------------------------------------  207 (402)
Q Consensus       182 ~~~i~~g~~~~vLvv~~e~~s~-~~~---------------~--------------------------------------  207 (402)
                      .++|++|..+.|||+++|.++. .+.               .                                      
T Consensus       112 ~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A  191 (393)
T 1afw_A          112 ANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKA  191 (393)
T ss_dssp             HHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH
Confidence            9999999999999999997652 110               0                                      


Q ss_pred             --------------CC----------ccc-h-----hh-----h-h--h-hhh-------hccCcEEEEEccCCCCC-CC
Q 044410          208 --------------PS----------ETH-L-----DV-----L-V--V-QAV-------FGDGAGAAIIGADSDIS-NH  240 (402)
Q Consensus       208 --------------~~----------~~~-~-----~~-----~-~--~-~~l-------fGDGAaA~vL~~~~~~~-~~  240 (402)
                                    |.          |+. +     ++     . .  . .++       ++|||+|+||++.+... ..
T Consensus       192 ~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g  271 (393)
T 1afw_A          192 YKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLN  271 (393)
T ss_dssp             HHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHHHHHTT
T ss_pred             HhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCCCCeechhcCcccchhheeeEecHHHHHHcC
Confidence                          00          000 0     00     0 0  0 122       59999999998754310 00


Q ss_pred             CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH
Q 044410          241 ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD  319 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~  319 (402)
                      ..+..++.+.+....                    .++.+   ......+++++|+++|+++ +|| ++-.|-.....--
T Consensus       272 ~~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ve~h~~ft~~~l  327 (393)
T 1afw_A          272 LPVLGRYIDFQTVGV--------------------PPEIM---GVGPAYAIPKVLEATGLQV-QDIDIFEINEAFAAQAL  327 (393)
T ss_dssp             CCCCEEEEEEEEEEC--------------------CGGGG---GGHHHHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHH
T ss_pred             CCccEEEEEEEEecc--------------------Chhhc---chhHHHHHHHHHHHcCCCH-HHCCEEEEeccCHHHHH
Confidence            112345554433211                    01111   1123468889999999997 999 9999987765444


Q ss_pred             HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410          320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       320 ~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      ...+.||++.+++..+ --..-+||+..|+-...+.+++..
T Consensus       328 ~~~~~lg~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~  367 (393)
T 1afw_A          328 YCIHKLGIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE  367 (393)
T ss_dssp             HHHHHHTCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCcCcCCC-CChhhcCCchhhHHHHHHHHHHHH
Confidence            4567799988776542 123358999998888888877765

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.73  E-value=3.7e-17  Score=163.68  Aligned_cols=256  Identities=12%  Similarity=0.044  Sum_probs=169.6

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-V-DMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~-~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      +..+|+.+|+++||+++|+++++||.|+++++++ + ..+..+.+++..||++.... +++++.+|+|++.||..|.++|
T Consensus        54 ~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p-~~~v~~aCaSg~~Al~~A~~~I  132 (442)
T 2wu9_A           54 YPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVA-VRTVNRQCSSGLQAVADVAAAI  132 (442)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSC-EEEEECGGGHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCce-EEEeCCcCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999988776 3 24567899999999953222 7899999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc-ccCC-----------------------------------------------------C---
Q 044410          186 ENNPGARVLVVCSDIRVL-DFHE-----------------------------------------------------P---  208 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~-~~~~-----------------------------------------------------~---  208 (402)
                      ++|.++.|||+++|.++. .+..                                                     |   
T Consensus       133 ~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag  212 (442)
T 2wu9_A          133 KAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAG  212 (442)
T ss_dssp             HTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcc
Confidence            999999999999998763 1100                                                     0   


Q ss_pred             -Ccc----------c----------------------hhh-----h-h--hhhh-------hccCcEEEEEccCCCCCC-
Q 044410          209 -SET----------H----------------------LDV-----L-V--VQAV-------FGDGAGAAIIGADSDISN-  239 (402)
Q Consensus       209 -~~~----------~----------------------~~~-----~-~--~~~l-------fGDGAaA~vL~~~~~~~~-  239 (402)
                       ..+          +                      .++     . .  ..++       ++|||+|+||.+.+.... 
T Consensus       213 ~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~A~~~  292 (442)
T 2wu9_A          213 KFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQK  292 (442)
T ss_dssp             TTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHH
T ss_pred             cccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCCCCCeechhcCCCCCceEEEEEeeHHHHHHc
Confidence             000          0                      000     0 0  0012       489999999976543000 


Q ss_pred             CCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHH
Q 044410          240 HESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLL  318 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~  318 (402)
                      ...+..++.+.+....                    .+..+   ......+++++|+++|+++ +|| +|-.|-.....-
T Consensus       293 g~~~~a~I~g~~~~~~--------------------~p~~~---~~~~~~A~~~Al~~AGl~~-~DId~iE~h~aft~~~  348 (442)
T 2wu9_A          293 GLPVLGVFRTFAAVGV--------------------DPAIM---GIGPAVAIPAAVKAAGLEL-DDIDLFEINEAFASQF  348 (442)
T ss_dssp             TCCCCEEEEEEEEEEC--------------------CGGGG---GGHHHHHHHHHHHHTTCCG-GGCCEEEECCSBHHHH
T ss_pred             CCCceEEEEEEEEecC--------------------Cchhc---chHHHHHHHHHHHHcCCCH-HHCCEEEEeCCChHHH
Confidence            0112345554432210                    01111   1123468889999999997 999 999998876554


Q ss_pred             HHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEE-EEEEcccccceeeEEeee
Q 044410          319 DQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGV-LFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       319 ~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vl-l~~~G~G~~~~~~ll~~~  395 (402)
                      -...+.||++.+++..+ --..-+||...|+-...+.+++....  ++...+   ++.| -.++|.| ...+++++..
T Consensus       349 l~~~~~lG~~~~~vN~~-GG~~a~GHp~GAsG~~~~~~~v~~Lr--~~~~~~---~~glas~~~GGG-~~~a~v~~~~  419 (442)
T 2wu9_A          349 VYCRNKLGLDPEKINVN-GGAMAIGHPLGATGARCVATLLHEMK--RRGKDC---RFGVVSMCIGTG-MGAAAVFERG  419 (442)
T ss_dssp             HHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--HHCTTC---CEEEEEEEETTT-EEEEEEEEEC
T ss_pred             HHHHHHhCCCCCCcCCC-ccHhhcCCchhHHHHHHHHHHHHHHh--ccCCCC---CEEEEEeecccc-hheEEEEEec
Confidence            44567899988877542 12335999988776666666655411  111113   5555 3567844 5566777653

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=99.68  E-value=1.8e-15  Score=163.83  Aligned_cols=270  Identities=17%  Similarity=0.191  Sum_probs=181.1

Q ss_pred             hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccE----EEEEecCC-CCC-------------------CCHHHHHHH
Q 044410           98 LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITH----LIFSAFYG-VDM-------------------PGADVRLMR  153 (402)
Q Consensus        98 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~-~~~-------------------p~~a~~i~~  153 (402)
                      +..+.....+....|+.+|+.+||+++|+++++||.    |+++++.. +..                   ...+.+|+.
T Consensus       105 i~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~  184 (917)
T 2hg4_A          105 ISPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAY  184 (917)
T ss_dssp             CCHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHH
T ss_pred             CCHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHH
Confidence            345556666778899999999999999999999984    77777765 321                   135789999


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----cC-----------CCCccchhhhh
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----FH-----------EPSETHLDVLV  217 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----~~-----------~~~~~~~~~~~  217 (402)
                      .||+.. +  .+.++.+|+|++.||.+|.+.|++|.++.+||+++|.++..     |.           .|.+    ...
T Consensus       185 ~lgl~G-p--s~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd----~~a  257 (917)
T 2hg4_A          185 CLGLEG-P--AMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFS----KAA  257 (917)
T ss_dssp             HHTCCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTB----TTC
T ss_pred             hcCCCC-C--eEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCccc----ccc
Confidence            999987 3  78899999999999999999999999999999999987531     10           1111    122


Q ss_pred             hhhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhc
Q 044410          218 VQAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMS  296 (402)
Q Consensus       218 ~~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~  296 (402)
                      .++++||||+|+||++.+... ........+.+.+......+.                +...+.  ......+|+++|+
T Consensus       258 dG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~----------------~~~~P~--~~~q~~ai~~Al~  319 (917)
T 2hg4_A          258 DGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASN----------------GLTAPS--GPAQQRVIRRALE  319 (917)
T ss_dssp             CCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCS----------------SSSCCC--HHHHHHHHHHHHH
T ss_pred             cCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCcc----------------CCCCCC--HHHHHHHHHHHHH
Confidence            467999999999998743200 001112344443322111000                001111  3445678999999


Q ss_pred             cCCCCCCcce-EEEEcCCCHHHH-----HHHHHHcCCCc--c-ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcc
Q 044410          297 PIGISDWNSL-FYVVHPGGDGLL-----DQVEKTLGLRK--E-KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKA  367 (402)
Q Consensus       297 ~~gl~~~~di-~~i~H~~~~~~~-----~~~~~~lgi~~--e-k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i  367 (402)
                      ++|+++ +|| ++..|..+..+-     ..+.+.+|...  + .+..+ .+-..+||+.+|+-+..|..++.. +.++.+
T Consensus       320 ~Agl~p-~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vg-s~K~~iGH~~~AaG~~~lik~vl~-L~~~~i  396 (917)
T 2hg4_A          320 NAGVRA-GDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIG-SVKSNIGHTQAAAGVAGVMKAVLA-LRHGEM  396 (917)
T ss_dssp             HHTCCG-GGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEE-CTHHHHCBCGGGTTHHHHHHHHHH-HHHTEE
T ss_pred             HcCCCH-HHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceecc-CcccceecchhhhHHHHHHHHHHH-HhcCCc
Confidence            999997 999 999999887543     34556666532  1 22211 135679999988877766655432 111322


Q ss_pred             c-----------------------------CCCCCceEEEEEEcccccceeeEEeee
Q 044410          368 T-----------------------------TGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       368 ~-----------------------------~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                      .                             .+.+..++++-+||.|.+-+.++|+-.
T Consensus       397 pp~~~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~  453 (917)
T 2hg4_A          397 PRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEA  453 (917)
T ss_dssp             CCCTTCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred             CCCCCCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccC
Confidence            1                             011125788899999999999999864

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=99.67  E-value=1.7e-15  Score=164.10  Aligned_cols=268  Identities=15%  Similarity=0.152  Sum_probs=181.9

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccE----EEEEecCC-CCC-------------C-----CHHHHHHHHcC
Q 044410          100 ARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITH----LIFSAFYG-VDM-------------P-----GADVRLMRLLG  156 (402)
Q Consensus       100 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~----li~~s~~~-~~~-------------p-----~~a~~i~~~LG  156 (402)
                      .+.....+....|+.+|+++||+++|+++++||.    |+++++++ +..             +     ..+.+|+..||
T Consensus        86 ~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lg  165 (915)
T 2qo3_A           86 PREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMG  165 (915)
T ss_dssp             HHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHT
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhC
Confidence            3444555667899999999999999999999994    88887765 321             1     36789999999


Q ss_pred             CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------cC------CCCccchhhhhhhh
Q 044410          157 LKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FH------EPSETHLDVLVVQA  220 (402)
Q Consensus       157 l~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~~------~~~~~~~~~~~~~~  220 (402)
                      +.. +  .+.++.+|+|++.||.+|.++|++|.++.+||+++|.++..          ..      .|.|.    ...++
T Consensus       166 l~G-p--s~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~----~adG~  238 (915)
T 2qo3_A          166 LEG-P--SISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGA----GADGF  238 (915)
T ss_dssp             BCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBT----TCCCB
T ss_pred             CCC-C--EEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccC----CCCce
Confidence            986 3  78999999999999999999999999999999999987521          11      12221    12478


Q ss_pred             hhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCC
Q 044410          221 VFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIG  299 (402)
Q Consensus       221 lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g  299 (402)
                      ++||||+|+||++.+... ........+.+.+....+.+                .+...+.  ......+|+++|+++|
T Consensus       239 v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~----------------~~~~~p~--~~~~~~~i~~Al~~Ag  300 (915)
T 2qo3_A          239 GFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGAS----------------NGLSAPS--GPAQRRVIRQALESCG  300 (915)
T ss_dssp             CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC----------------SSTTCCC--HHHHHHHHHHHHHHTT
T ss_pred             eecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCc----------------cCCCCCC--HHHHHHHHHHHHHHcC
Confidence            999999999998753200 00011234444332211100                0011111  2356678999999999


Q ss_pred             CCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCc---cccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhccc--
Q 044410          300 ISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRK---EKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKAT--  368 (402)
Q Consensus       300 l~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~---ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~--  368 (402)
                      +++ +|| ++.+|..+..+     ...+.+.++...   ..+..+ .+-..+||+.+|+-+..|..++.. +.++.+.  
T Consensus       301 l~p-~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vg-s~K~~iGH~~~AaG~~~lik~~l~-L~~~~ipp~  377 (915)
T 2qo3_A          301 LEP-GDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLG-SVKSNIGHTQAAAGVTGLLKVVLA-LRNGELPAT  377 (915)
T ss_dssp             CCG-GGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCC
T ss_pred             CCH-HHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCccccc-CcccceeCCccccchHHHHHHHHH-HhcCCCCCC
Confidence            998 999 99999875443     445667787643   122221 136689999999888777655532 1113321  


Q ss_pred             ---------------------------CCCCCceEEEEEEcccccceeeEEeee
Q 044410          369 ---------------------------TGEGLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       369 ---------------------------~G~~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                                                 .+.+..++++-+||.|.+-+.++|+-.
T Consensus       378 ~~~~~~~p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~  431 (915)
T 2qo3_A          378 LHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEA  431 (915)
T ss_dssp             SSCSSBCTTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEEC
T ss_pred             CCCCCCCcccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeec
Confidence                                       011125788999999999999999854

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=99.63  E-value=4.5e-14  Score=153.61  Aligned_cols=268  Identities=15%  Similarity=0.125  Sum_probs=180.6

Q ss_pred             hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C-------------------CCCCHHHHHHH
Q 044410           98 LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V-------------------DMPGADVRLMR  153 (402)
Q Consensus        98 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~-------------------~~p~~a~~i~~  153 (402)
                      +..+.....+....|+.+++.+||+++|+++++||    .|++++++. +                   ..+..+++|+.
T Consensus        69 i~~~ea~~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~  148 (965)
T 3hhd_A           69 VHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSF  148 (965)
T ss_dssp             CCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHH
T ss_pred             CCHHHHhhcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHH
Confidence            44555566667889999999999999999999999    788886654 2                   23357899999


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------c------CCCCccchhhhh
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------F------HEPSETHLDVLV  217 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~------~~~~~~~~~~~~  217 (402)
                      .||++..   .+.++.+|+|++.||.+|.+.|++|.++.+|++++|.++..          +      ..+.|.    ..
T Consensus       149 ~lgl~GP---s~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~----~a  221 (965)
T 3hhd_A          149 FFDFRGP---SIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDT----AG  221 (965)
T ss_dssp             HHTCCSC---EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBT----TC
T ss_pred             HhCCCCC---eeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchh----cc
Confidence            9999873   78999999999999999999999999999999999987420          0      112221    12


Q ss_pred             hhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhcc
Q 044410          218 VQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSP  297 (402)
Q Consensus       218 ~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~  297 (402)
                      ..+++||||+++||++.+. ..  .....+.+.+........         .      +...+.  ......+|+++|++
T Consensus       222 dG~~~gEGagavvL~~l~~-A~--~i~a~I~g~~~n~dg~~~---------~------~~t~P~--~~~q~~~i~~Al~~  281 (965)
T 3hhd_A          222 NGYCRSEGVVAVLLTKKSL-AR--RVYATILNAGTNTDGFKE---------Q------GVTFPS--GDIQEQLIRSLYQS  281 (965)
T ss_dssp             CSBCBBCEEEEEEEEEGGG-CS--SCSEEEEEEEEEECCCCT---------T------CTTSCC--HHHHHHHHHHHHHH
T ss_pred             CCccccceEEEEEEecHHH-cC--cccEEEEeeeccCCCCCC---------C------CCcCCC--HHHHHHHHHHHHHH
Confidence            4678999999999998655 21  123345443322111000         0      001111  23455789999999


Q ss_pred             CCCCCCcce-EEEEcCCCHHH-----HHHHHHHcCCCcc-ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccC-
Q 044410          298 IGISDWNSL-FYVVHPGGDGL-----LDQVEKTLGLRKE-KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT-  369 (402)
Q Consensus       298 ~gl~~~~di-~~i~H~~~~~~-----~~~~~~~lgi~~e-k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~-  369 (402)
                      +|+++ +|| ++-.|-.+...     ...+.+.++-..+ ..+.. .+-..+||+.+|+-...|-..+.. +.++.+.| 
T Consensus       282 Agl~p-~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vg-s~Ks~iGH~~~AaG~~~lik~~l~-l~~~~ipp~  358 (965)
T 3hhd_A          282 AGVAP-ESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIG-STKSNMGHPEPASGLAALAKVLLS-LEHGLWAPN  358 (965)
T ss_dssp             TTCCG-GGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCC
T ss_pred             hCCCH-HHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceeee-ccccccccchhhhhHHHHHHHHHH-HhcCCcCCc
Confidence            99997 999 99999776543     3445566654322 22221 134567999999877666544432 11132211 


Q ss_pred             --------CC-----------------CCceEEEEEEcccccceeeEEeee
Q 044410          370 --------GE-----------------GLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       370 --------G~-----------------~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                              ..                 +..+++.-+||.|.+-+.++|+-.
T Consensus       359 ~~~~~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~  409 (965)
T 3hhd_A          359 LHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPN  409 (965)
T ss_dssp             SSCCSBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEEC
T ss_pred             cCCCCCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccC
Confidence                    00                 013578899999999999999854

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.42  E-value=1.1e-12  Score=133.85  Aligned_cols=260  Identities=13%  Similarity=0.069  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-------------CCCCCHHHHHHHHcCCCCccccceeeccccchHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-------------VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGG  175 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-------------~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~  175 (402)
                      +.+|+.+|++.||+++|+++++||.+|.+....             ...+..+..++..||+++.+  ...+..+|+|++
T Consensus        42 ~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~~~~--~~~~~~~caSg~  119 (520)
T 4egv_A           42 SVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGADPAH--AVLEVIGGQSPQ  119 (520)
T ss_dssp             HHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCCCSE--EEECCSSTTHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCCCce--EEEecCCCHHHH
Confidence            789999999999999999999988776543321             12346778999999999765  677899999999


Q ss_pred             HHHHHHHHHHHcCCCCeEEEEEeccCccc-c-CC----CCc---------------------------------------
Q 044410          176 TVIRLAKDIAENNPGARVLVVCSDIRVLD-F-HE----PSE---------------------------------------  210 (402)
Q Consensus       176 ~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~-~~----~~~---------------------------------------  210 (402)
                      .++..|.+.|++|.++.||+++.|.+|.. + ..    +..                                       
T Consensus       120 ~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~  199 (520)
T 4egv_A          120 HLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLLE  199 (520)
T ss_dssp             HHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHHHHHHHHH
Confidence            99999999999999999999999998631 0 00    000                                       


Q ss_pred             ----------------------------------------cchhh-----------------hhhhhhhccCcEEEEEcc
Q 044410          211 ----------------------------------------THLDV-----------------LVVQAVFGDGAGAAIIGA  233 (402)
Q Consensus       211 ----------------------------------------~~~~~-----------------~~~~~lfGDGAaA~vL~~  233 (402)
                                                              .+.++                 ...+.-.+|||+|+||.+
T Consensus       200 s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~S  279 (520)
T 4egv_A          200 NARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMMS  279 (520)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEEE
T ss_pred             HHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEee
Confidence                                                    00000                 001234689999999987


Q ss_pred             CCCCCC-CCCCceEEEeeeee-ecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEE
Q 044410          234 DSDISN-HESPLFQILSCTQT-TVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVV  310 (402)
Q Consensus       234 ~~~~~~-~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~  310 (402)
                      .+.... ...+...+...+.. ..|..   + +.          ..++.  .......+++++|+++|+++ +|| +|=+
T Consensus       280 ~e~A~~lGl~p~a~I~~~a~a~~~~~~---~-~~----------~~~~~--~~~~~~~a~~~al~~agl~~-~did~~E~  342 (520)
T 4egv_A          280 VESARKLGVPEEKWVYLRGHADMKEPK---L-LE----------RADIG--ASPASVTAVNEALRVAGIGL-DDVAAFDL  342 (520)
T ss_dssp             HHHHHHHTCCGGGCEEEEEEEEEECCC---G-GG----------CSCTT--CCHHHHHHHHHHHHHHTCCG-GGEEEEEE
T ss_pred             HHHHHHcCCCCceEEEEEEEeccCCcc---c-cc----------ccccc--cChHHHHHHHHHHHHhCCCH-HHCCEEEE
Confidence            543100 01122223222111 00100   0 00          00100  01123467889999999997 999 8989


Q ss_pred             cCCCHHHHHHHHHHcCCCcc---ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccc
Q 044410          311 HPGGDGLLDQVEKTLGLRKE---KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTV  387 (402)
Q Consensus       311 H~~~~~~~~~~~~~lgi~~e---k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~  387 (402)
                      |-.-....-...+.||++.+   ++..+ --+..+||..+++-...+.++..+.    +-..|   .+.|..+-| |+-|
T Consensus       343 ~dAF~~~~l~~~~~lG~~~~~~~~~n~~-Gg~~~~Ghp~~a~g~~~~~~~v~~l----r~~~~---~~~L~~~~g-g~~~  413 (520)
T 4egv_A          343 YSCFPFPVFNICDGTGLATDDPRGLTLT-GGLPFFGGLGNNYSMHGIAEAVNEM----RDKPG---QFALVGANG-GIAS  413 (520)
T ss_dssp             CCSSSHHHHHHHHHHCCCTTCTTCSCSS-CCHHHHCSCSSSHHHHHHHHHHHHH----HHSTT---CEEEEEEEE-TTTT
T ss_pred             eCCcHHHHHHHHHHhCCCCCCCCCcCCC-cccccCCChHHHHHHHHHHHHHHHH----hcCCC---CceEEeCCC-Ceee
Confidence            98766666778899999543   44331 1245699999999888888877751    11234   666665444 5666


Q ss_pred             eeeEEeeec
Q 044410          388 ETVVLQSVS  396 (402)
Q Consensus       388 ~~~ll~~~~  396 (402)
                      ....+.+..
T Consensus       414 ~~~~~~l~~  422 (520)
T 4egv_A          414 KYSVGIYST  422 (520)
T ss_dssp             EEEEEEEES
T ss_pred             eeeEEEEcC
Confidence            555555543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.41  E-value=9.7e-13  Score=155.12  Aligned_cols=278  Identities=12%  Similarity=0.106  Sum_probs=174.7

Q ss_pred             hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc--------EEEEEecCC-C-----------------------CC-
Q 044410           98 LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT--------HLIFSAFYG-V-----------------------DM-  144 (402)
Q Consensus        98 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId--------~li~~s~~~-~-----------------------~~-  144 (402)
                      +..+.....+....|+.+|+.+||+++|+++++|+        .|+++++.+ +                       .+ 
T Consensus      2636 Is~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2715 (3089)
T 3zen_D         2636 ISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLP 2715 (3089)
T ss_dssp             CCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTST
T ss_pred             CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccc
Confidence            45566666677899999999999999999999885        577776531 0                       11 


Q ss_pred             CCHHHHHHH-HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-------------------
Q 044410          145 PGADVRLMR-LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-------------------  204 (402)
Q Consensus       145 p~~a~~i~~-~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-------------------  204 (402)
                      ...+.++.. .+|+.. +  ++.++.+|+|++.||.+|.++|++|.++.+|++++|.++..                   
T Consensus      2716 ~~~aa~is~~~lGl~G-P--s~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~ 2792 (3089)
T 3zen_D         2716 NVVAAHVMQSYVGGYG-A--MVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRA 2792 (3089)
T ss_dssp             THHHHHHHHHTTCCCS-C--EECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCCC-C--ceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhhhcchhhhh
Confidence            235666765 459976 3  78999999999999999999999999999999999986520                   


Q ss_pred             -------cCCCCccchhhhhhhhhhccCcEEEEEccCCCC--CCCCCCceEEEeeeeeecCCCcccccceeecCceEEEe
Q 044410          205 -------FHEPSETHLDVLVVQAVFGDGAGAAIIGADSDI--SNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHL  275 (402)
Q Consensus       205 -------~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~  275 (402)
                             ...|.+.+    ..++++||||+++||.+.+..  .+ ......+.+......+....     +...      
T Consensus      2793 ~~~sp~~~crpFd~~----~dG~v~GEGAgavVL~~~e~A~~~G-~~I~avI~g~~~n~Dg~~~~-----~~aP------ 2856 (3089)
T 3zen_D         2793 KGISDSKFSRANDRR----RLGFLEAQGGGTILLARGDLALKMG-LPVLAVVGYAQSFADGVHTS-----IPAP------ 2856 (3089)
T ss_dssp             TTCCTTTSCCSSBTT----CCCBCBBCEEEEEEEEEHHHHHHHT-CCCCEEEEEEEEECCCCCCC-----SSCC------
T ss_pred             ccCCcccccCccccC----CCCEEEeccceEEEEeeHHHHHhCC-CceEEEEEEEEEecCCcccC-----ccCC------
Confidence                   00122211    236789999999999875420  01 01122222221111110000     0000      


Q ss_pred             CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH--------HHHHHcCCCc-cccHHHHHHHHhcCCC
Q 044410          276 SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD--------QVEKTLGLRK-EKLWASRYVLREYGNM  345 (402)
Q Consensus       276 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~--------~~~~~lgi~~-ek~~~~~~~l~~~Gn~  345 (402)
                      +...+..+......+|+++|+++|+++ +|| ++.+|-.+..+-+        .+.+.+|... .++..+ ..-..+||+
T Consensus      2857 ~~g~~~a~~~~q~~ai~~AL~~AGl~p-~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~-s~Ks~iGH~ 2934 (3089)
T 3zen_D         2857 GLGALGAARGGRESTLARSLAQLGVGA-DDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIV-SQKTLTGHA 2934 (3089)
T ss_dssp             CCGGGGGSTTGGGSHHHHHHHTTTCCG-GGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEE-CSHHHHCBC
T ss_pred             chhHHhHhhhhHHHHHHHHHHHcCCCH-HHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceec-ccccccCCc
Confidence            111111111122367889999999997 999 9999987765433        4556778654 333321 134578999


Q ss_pred             CcchHHHHHHHHHHhhhhhhcccC----------------------------CCCCceEEEEEEcccccceeeEEeeecc
Q 044410          346 GAPSVFFILDEVRKKSIEEMKATT----------------------------GEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       346 ~sasi~i~L~~~~~~~~~~g~i~~----------------------------G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                      .+|+-...|..++.. +.+|.+.|                            ..+..++++-+||.|.+-+.++|+-.+.
T Consensus      2935 ~gAAG~~~lik~ll~-L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~~ 3013 (3089)
T 3zen_D         2935 KGGAAVFQMMGLCQI-LRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPEA 3013 (3089)
T ss_dssp             STTHHHHHHHHHHHH-HHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGGG
T ss_pred             hhhhhHHHHHHHHHH-HhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCch
Confidence            999866555443331 11133211                            0012568889999999988889886543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.06  E-value=4.9e-09  Score=123.93  Aligned_cols=268  Identities=15%  Similarity=0.115  Sum_probs=178.0

Q ss_pred             hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C--------------C----C-CCHHHHHHH
Q 044410           98 LDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V--------------D----M-PGADVRLMR  153 (402)
Q Consensus        98 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~--------------~----~-p~~a~~i~~  153 (402)
                      +..+.....+-...|+.+++.+||++||+++++++    .|++++++. +              .    . ...+++|+.
T Consensus        67 i~~~ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~  146 (2512)
T 2vz8_A           67 VHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSF  146 (2512)
T ss_dssp             CCHHHHHTSCHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHH
T ss_pred             CCHHHHHhcCHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHH
Confidence            34455555566788999999999999999876653    566665532 1              0    1 125889999


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcc----------ccC------CCCccchhhhh
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DFH------EPSETHLDVLV  217 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~----------~~~------~~~~~~~~~~~  217 (402)
                      .+|+.+.   .+.+..+|+|++.||++|.+.|++|.++.+|+.+++.+..          .+.      .|.|.+.    
T Consensus       147 ~~~l~Gp---s~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~~a----  219 (2512)
T 2vz8_A          147 FFDFKGP---SITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDAEG----  219 (2512)
T ss_dssp             HHTCCSC---EEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSSTTC----
T ss_pred             HhCCCCC---ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCCCC----
Confidence            9999985   6889999999999999999999999999999999997421          011      1333222    


Q ss_pred             hhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhcc
Q 044410          218 VQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSP  297 (402)
Q Consensus       218 ~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~  297 (402)
                      .++..|+|++++||++-+. ..  .....+.+.+...              +|.. ..+-..+.  ......+|+++|++
T Consensus       220 dG~~~gEG~~~~vLk~l~~-A~--~i~a~i~g~~~n~--------------dg~~-~~~~t~P~--~~~q~~~i~~al~~  279 (2512)
T 2vz8_A          220 TGYCRAEAVVAVLLTKKSL-AR--RVYATILNAGTNT--------------DGSK-EQGVTFPS--GDVQEQLIRSLYAP  279 (2512)
T ss_dssp             CCBCBBCEEEEEEEEEGGG-CS--CCSEEEEEEEEEE--------------CCCC-TTCSSSCC--HHHHHHHHHTTSGG
T ss_pred             CCcceeeeEEEEEEEEHHH-CC--cccEEEEEEEEcC--------------CCCC-CCCCCCCC--HHHHHHHHHHHHHH
Confidence            3688999999999998765 21  1233444433221              1100 00011111  33456799999999


Q ss_pred             CCCCCCcce-EEEEcCCCHHHHH-----HHHHHcCCCcc-ccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccC-
Q 044410          298 IGISDWNSL-FYVVHPGGDGLLD-----QVEKTLGLRKE-KLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT-  369 (402)
Q Consensus       298 ~gl~~~~di-~~i~H~~~~~~~~-----~~~~~lgi~~e-k~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~-  369 (402)
                      +|+++ ++| |+-.|..+...-|     .+.+.+|-... .++.. .+-..+||+-+|+-...|-..+-. +.+|.+.| 
T Consensus       280 ag~~p-~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~ig-S~Ks~iGH~~~AaG~~~~ik~~l~-l~~~~ipp~  356 (2512)
T 2vz8_A          280 AGPDP-ESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIG-STKSNMGHPEPASGVAALIKVLLS-LEHGVWAPN  356 (2512)
T ss_dssp             GSSCT-TSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCEEE-CHHHHHCBCGGGHHHHHHHHHHHH-HTTTBCCCC
T ss_pred             cCCCH-HHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCceee-cccccccccccccchhHHHHHHHH-HHCCCcCCC
Confidence            99998 999 9999988766544     45666764322 22221 135688999999887776654421 11132221 


Q ss_pred             --------CC-----------------CCceEEEEEEcccccceeeEEeee
Q 044410          370 --------GE-----------------GLECGVLFGFGPGLTVETVVLQSV  395 (402)
Q Consensus       370 --------G~-----------------~~d~vll~~~G~G~~~~~~ll~~~  395 (402)
                              ..                 +..+++.-+||.|.+-+.++|+-.
T Consensus       357 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~  407 (2512)
T 2vz8_A          357 LHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPN  407 (2512)
T ss_dssp             SSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEEC
T ss_pred             CCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccC
Confidence                    00                 013688899999999999999854

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.78  E-value=1.2e-07  Score=107.61  Aligned_cols=130  Identities=12%  Similarity=0.035  Sum_probs=94.5

Q ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHcCCC-CCCc----c----EEEEEecCCC-------------------------CC
Q 044410           99 DARQAMLIDEVPKLGKEAALKAIKEWGQP-VSKI----T----HLIFSAFYGV-------------------------DM  144 (402)
Q Consensus        99 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~-~~dI----d----~li~~s~~~~-------------------------~~  144 (402)
                      ..+.....+....|+..++.+||+++|++ |.++    +    .++++++.+.                         ..
T Consensus      1201 ~~~ea~~mDp~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1280 (1887)
T 2uv8_A         1201 SDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFI 1280 (1887)
T ss_dssp             CHHHHHHSCHHHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHST
T ss_pred             CHHHHHhcCHHHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchh
Confidence            34445555667789999999999999994 6662    2    5555554210                         11


Q ss_pred             CCHHHHHHHH-cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-------------------
Q 044410          145 PGADVRLMRL-LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-------------------  204 (402)
Q Consensus       145 p~~a~~i~~~-LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-------------------  204 (402)
                      -..+.+|... ||+...   ...+..+|++++.||..|.+.|++|.++.+||.++|.++..                   
T Consensus      1281 n~~aa~is~~~lgl~GP---~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~~f~~m~als~~~~e~~ 1357 (1887)
T 2uv8_A         1281 NTMSAWVNMLLISSSGP---IKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFE 1357 (1887)
T ss_dssp             THHHHHHHHHTTCCCSC---CCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCHHHHHH
T ss_pred             hHHHHHHHHHHcCCccc---eEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhc
Confidence            2356778884 999874   67899999999999999999999999999999999986420                   


Q ss_pred             -------cCCCCccchhhhhhhhhhccCcEEEEEccCC
Q 044410          205 -------FHEPSETHLDVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       205 -------~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                             ...|.+.+    ..+++.||||+++||.+.+
T Consensus      1358 ~g~~p~~~~RPfd~~----r~Gfv~gEGag~vVL~~~~ 1391 (1887)
T 2uv8_A         1358 HGRTPAEMSRPATTT----RNGFMEAQGAGIQIIMQAD 1391 (1887)
T ss_dssp             TTCCGGGSCCTTBTT----CCSBCBBCEEEEEEEEEHH
T ss_pred             ccCCCccCcCCCccc----CCCcccccceEEEEEccHH
Confidence                   01122211    1367899999999998743

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.76  E-value=1.4e-07  Score=106.93  Aligned_cols=126  Identities=13%  Similarity=0.038  Sum_probs=92.0

Q ss_pred             HHHHhhHHHHHHHHHHHHHHHcCCC-CCCc----c----EEEEEecCC--------------------CCCC-----CHH
Q 044410          103 AMLIDEVPKLGKEAALKAIKEWGQP-VSKI----T----HLIFSAFYG--------------------VDMP-----GAD  148 (402)
Q Consensus       103 ~~~~~~~~~la~~Aa~~aL~~ag~~-~~dI----d----~li~~s~~~--------------------~~~p-----~~a  148 (402)
                      ....+....|+..++.+||+++|++ |.++    +    .++++++.+                    +..+     .++
T Consensus      1180 a~~mDp~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~a 1259 (1878)
T 2uv9_A         1180 IQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMA 1259 (1878)
T ss_dssp             HHHSCHHHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHH
T ss_pred             HHhcCHHHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHH
Confidence            3444556789999999999999997 6652    2    556655422                    1111     246


Q ss_pred             HHHHHH-cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----------c------------
Q 044410          149 VRLMRL-LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------F------------  205 (402)
Q Consensus       149 ~~i~~~-LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----------~------------  205 (402)
                      .+|... ||+...   ...+..+|++++.||..|.+.|++|.++.+||.++|.++..          .            
T Consensus      1260 a~vs~~~lg~~GP---~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g~~ 1336 (1878)
T 2uv9_A         1260 AWVNMLLLSSTGP---IKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGRE 1336 (1878)
T ss_dssp             HHHHHHTCCCCCC---BCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTTCC
T ss_pred             HHHHHHhcCCCCC---eEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcCCC
Confidence            788884 999874   67899999999999999999999999999999999976410          0            


Q ss_pred             ----CCCCccchhhhhhhhhhccCcEEEEEccCC
Q 044410          206 ----HEPSETHLDVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       206 ----~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                          ..|.+.+    ..+++.||||+++||.+.+
T Consensus      1337 p~~~~RPfd~~----r~Gfv~gEGag~vVL~~~~ 1366 (1878)
T 2uv9_A         1337 PGEMSRPTSTT----RNGFMESQGCGVQVIMTAQ 1366 (1878)
T ss_dssp             TTSSCCSSBTT----CCCBCBBCEEEEEEEEEHH
T ss_pred             cccCcCCCccC----CCCCcccceeEEEEEeeHH
Confidence                0122211    1367899999999998743

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.73  E-value=1.8e-09  Score=118.74  Aligned_cols=120  Identities=13%  Similarity=0.074  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHHHHcCCC-CCCc----c----EEEEEecCC-CC-----------------------CC-CHHHHHHH-
Q 044410          109 VPKLGKEAALKAIKEWGQP-VSKI----T----HLIFSAFYG-VD-----------------------MP-GADVRLMR-  153 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~-~~dI----d----~li~~s~~~-~~-----------------------~p-~~a~~i~~-  153 (402)
                      ...|+.+|+.+||+++|++ |.++    +    .++++++.+ +.                       .+ ..+.++.. 
T Consensus      1012 ~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~ 1091 (1688)
T 2pff_A         1012 ITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNML 1091 (1688)
T ss_dssp             STTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHH
Confidence            5679999999999999997 5542    1    445554332 10                       12 34567777 


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc----c----------------------CC
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F----------------------HE  207 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~----~----------------------~~  207 (402)
                      .||+...   ...+..+|+|++.||..|.+.|++|.++.+||.++|.++..    |                      ..
T Consensus      1092 ~LGl~GP---s~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cR 1168 (1688)
T 2pff_A         1092 LISSSGP---IKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSR 1168 (1688)
T ss_dssp             SCCCCCC---CCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCC
T ss_pred             HcCCcCC---eEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhccC
Confidence            6999863   78899999999999999999999999999999999986521    1                      01


Q ss_pred             CCccchhhhhhhhhhccCcEEEEEccCC
Q 044410          208 PSETHLDVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       208 ~~~~~~~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                      |.+.+    ...+++||||+++||.+.+
T Consensus      1169 PFd~~----rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A         1169 PATTT----RNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp             SSSSS----CCCCCCCSCCEEEEEECSH
T ss_pred             cCccC----CCCCccccceEEEEeCcHH
Confidence            11111    1367899999999998754

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=93.62  E-value=0.13  Score=48.90  Aligned_cols=91  Identities=14%  Similarity=0.143  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccc------ccee-ecc--------ccch
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVN------RLMI-YTQ--------GCYM  173 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~------~~~~-i~~--------~C~~  173 (402)
                      ....|++.+++.|+++|++++|+|.|+-+--. ...-.+...+.+++|++....      ..|+ -++        ||+.
T Consensus       205 maPaA~~ti~~~l~d~g~~~~d~D~ivtgdL~-q~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa  283 (347)
T 3lma_A          205 MAPAAADTIKQHLEDLGRTPDDYDLILTGDLS-GVGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSA  283 (347)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCSEEEEESCH-HHHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHH
T ss_pred             chHHHHHHHHHHHHHhCCCHHHcCEEecCChH-HHHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHH
Confidence            34556677799999999999999998853211 122234567788888874221      0112 123        5555


Q ss_pred             HHHHHHHHHHHHHcCCCCeEEEEEeccC
Q 044410          174 GGTVIRLAKDIAENNPGARVLVVCSDIR  201 (402)
Q Consensus       174 ~~~al~~A~~~i~~g~~~~vLvv~~e~~  201 (402)
                      .+..=.+-.. ++.|..++||+|+.-..
T Consensus       284 ~v~~~~~~~~-~~~g~~~ril~~~tGal  310 (347)
T 3lma_A          284 VVTFAHIFKE-IEAGRLNRVLVVATGAL  310 (347)
T ss_dssp             HHHHHTHHHH-HHTTSCSEEEEEEEEEC
T ss_pred             HHHHHHHHHH-HhcCcccEEEEEecccc
Confidence            5444344444 67788999999986553

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=93.43  E-value=0.26  Score=46.81  Aligned_cols=88  Identities=15%  Similarity=0.195  Sum_probs=56.5

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~  184 (402)
                      .......++++++|+++|++++|||.++....    ....-..++++||++..... .+.  -+.++++...+|..+..-
T Consensus       243 ~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sasi~~~L~~~~~~  318 (345)
T 3s21_A          243 EGIKLAQKTFVAAKQVLGWAVEELDQFVIHQV----SRPHTAAFVKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKEL  318 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCcCHHHceeeHhhcCchHHHHHHHHHHHHHHc
Confidence            34566778889999999999999999886332    22344678899999865321 111  245666666666554332


Q ss_pred             HHcCCCCeEEEEEec
Q 044410          185 AENNPGARVLVVCSD  199 (402)
Q Consensus       185 i~~g~~~~vLvv~~e  199 (402)
                      =+..+.+++|+++.-
T Consensus       319 g~~~~Gd~vll~~~G  333 (345)
T 3s21_A          319 GRLKKGDRIALLGIG  333 (345)
T ss_dssp             TCCCTTCEEEEEEEE
T ss_pred             CCCCCCCEEEEEEEC
Confidence            112245788887743

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=93.38  E-value=0.26  Score=46.59  Aligned_cols=81  Identities=15%  Similarity=0.094  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~  184 (402)
                      ..+...++++++|+++|++++|||.++....    .+..-..++++||++.... ...    -+.++++-..+|..   +
T Consensus       232 ~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~~~-~~~l~~~GNt~sasi~~~L~~---~  303 (333)
T 4dfe_A          232 AVNVLEKVAVEALEKANLSAEQIDWLIPHQA----NIRIMQSTCRKLGLPQERM-IVTVGEHGNTSAASIPLALDV---A  303 (333)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHh-hhhHHhcCchHHHHHHHHHHH---H
Confidence            4566678899999999999999998876332    2234568889999986532 111    24455566655543   3


Q ss_pred             HHcC---CCCeEEEEE
Q 044410          185 AENN---PGARVLVVC  197 (402)
Q Consensus       185 i~~g---~~~~vLvv~  197 (402)
                      ++.|   +.+++|+++
T Consensus       304 ~~~g~~~~Gd~vll~~  319 (333)
T 4dfe_A          304 VRDGRIKRGQNVLIEG  319 (333)
T ss_dssp             HHTTCSCTTCEEEEEE
T ss_pred             HHcCCCCCCCEEEEEE
Confidence            4444   457888776

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=92.97  E-value=0.4  Score=45.19  Aligned_cols=82  Identities=7%  Similarity=-0.049  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~  184 (402)
                      ......++++++|+++|++++|||.++....    .+..-..++++||++.... ...    -+.++++-..+|..+   
T Consensus       222 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~---  293 (323)
T 3il3_A          222 AVRELSNVVEETLLANNLDKKDLDWLVPHQA----NLRIITATAKKLEMDMSQV-VVTLDKYANNSAATVPVALDEA---  293 (323)
T ss_dssp             HHHHHHHHHHHHHHTTTCCTTTCCEEEECCS----CHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHcCcCHHHh-hccHhhcCchHHHHHHHHHHHH---
Confidence            4556678899999999999999998876332    2234468899999986532 112    244556666666443   


Q ss_pred             HHcC---CCCeEEEEEe
Q 044410          185 AENN---PGARVLVVCS  198 (402)
Q Consensus       185 i~~g---~~~~vLvv~~  198 (402)
                      ++.|   +.+++|+++.
T Consensus       294 ~~~g~~~~Gd~vll~~~  310 (323)
T 3il3_A          294 IRDGRIQRGQLLLLEAF  310 (323)
T ss_dssp             HHTTSSCTTCEEEEEEE
T ss_pred             HHcCCCCCCCEEEEEEE
Confidence            4444   4578888763

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=92.96  E-value=0.3  Score=46.75  Aligned_cols=82  Identities=15%  Similarity=0.051  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~  184 (402)
                      ......++++++|+++|++++|||.++....    ....-..++++||++.... ...    -+.++++-+.+|..+..-
T Consensus       252 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----n~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sAsi~l~L~~~~~~  326 (359)
T 3h78_A          252 ASQTLVRIAGEMLAAHELTLDDIDHVICHQP----NLRILDAVQEQLGIPQHKF-AVTVDRLGNMASASTPVTLAMFWPD  326 (359)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCcCHHHh-hhhhhcccchHHHHHHHHHHHHHHh
Confidence            4566678999999999999999999876332    2234568889999986532 111    355667777777655443


Q ss_pred             HHcCCCCeEEEEE
Q 044410          185 AENNPGARVLVVC  197 (402)
Q Consensus       185 i~~g~~~~vLvv~  197 (402)
                        -.+.+++|+++
T Consensus       327 --l~~Gd~vll~~  337 (359)
T 3h78_A          327 --IQPGQRVLVLT  337 (359)
T ss_dssp             --SCTTCEEEEEE
T ss_pred             --CCCCCEEEEEE
Confidence              33467888776

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=92.90  E-value=0.28  Score=46.61  Aligned_cols=84  Identities=12%  Similarity=-0.054  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccce-e----eccccchHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLM-I----YTQGCYMGGTVIRLAKD  183 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~-~----i~~~C~~~~~al~~A~~  183 (402)
                      +.....++++++|+++|++++|||.++....    ....-..++++||++.... .. .    -+.++++-..+|..+..
T Consensus       247 a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----~~~i~~~~~~~Lgl~~~~~-~~~~l~~~GNtssasi~~~L~~~~~  321 (350)
T 4ewp_A          247 AVWSMAKVAREALDAAGVEPEDLAAFIPHQA----NMRIIDEFAKQLKLPESVV-VARDIADAGNTSAASIPLAMHRLLE  321 (350)
T ss_dssp             HHHTHHHHHHHHHHHHTCCGGGEEEEEECCS----CHHHHHHHHHHTTCCTTSE-ECCTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHhhcCChhHhceEEecCC----CHHHHHHHHHHcCcChHhE-EecccccccchHHHHHHHHHHHHHH
Confidence            4556678899999999999999999876332    2234467899999986531 11 1    24456666666654433


Q ss_pred             HHHcCCCCeEEEEE
Q 044410          184 IAENNPGARVLVVC  197 (402)
Q Consensus       184 ~i~~g~~~~vLvv~  197 (402)
                      -=+-.+.+++|+++
T Consensus       322 ~g~~~~Gd~vll~~  335 (350)
T 4ewp_A          322 ENPELSGGLALQIG  335 (350)
T ss_dssp             HCGGGTTSEEEEEE
T ss_pred             hCCCCCcCEEEEEE
Confidence            21112457888776

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=92.81  E-value=0.36  Score=45.07  Aligned_cols=84  Identities=11%  Similarity=-0.020  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-ce--eeccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LM--IYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~--~i~~~C~~~~~al~~A~~~i  185 (402)
                      ..+-..++.+++|+++|++++|||.++... +.   ...-..+.+.||++..... ..  .-+..+++.+.+|..+   +
T Consensus       216 ~~~~~~~~i~~aL~~agl~~~did~v~~H~-~~---~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~---~  288 (317)
T 1hnj_A          216 AVTELAHIVDETLAANNLDRSQLDWLVPHQ-AN---LRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA---V  288 (317)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEECC-SC---HHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH---H
Confidence            344667889999999999999999887633 22   1123468889999754311 01  1244666666666443   4


Q ss_pred             HcC---CCCeEEEEEec
Q 044410          186 ENN---PGARVLVVCSD  199 (402)
Q Consensus       186 ~~g---~~~~vLvv~~e  199 (402)
                      +.+   +.+++|+++.-
T Consensus       289 ~~~~~~~G~~vll~~~G  305 (317)
T 1hnj_A          289 RDGRIKPGQLVLLEAFG  305 (317)
T ss_dssp             HTTCSCTTCEEEEEEEE
T ss_pred             HhCCCCCCCEEEEEEEc
Confidence            444   46788887643

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=92.67  E-value=0.33  Score=46.64  Aligned_cols=82  Identities=11%  Similarity=0.010  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~~  184 (402)
                      ......++++++|+++|++++|||.++....    ....-..++++||++.... ...    -+.++++-..+|..   +
T Consensus       264 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~----n~~i~~~~~~~Lgl~~ek~-~~~l~~~GNtssAsipl~L~~---~  335 (365)
T 3gwa_A          264 SLAEVPRAADRLLALAGEPRENIDCFVLHQA----NRFMLDALRKKMKIPEHKF-PVLMEHCGNTVSSTLPLALET---M  335 (365)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHHTCCGGGS-CCCCTTTCBCGGGHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC----CHHHHHHHHHHhCCCHHHH-HHHHhcccchHHHHHHHHHHH---H
Confidence            4566678899999999999999999886332    2234578899999987532 111    23455555555533   3


Q ss_pred             HHcC---CCCeEEEEEe
Q 044410          185 AENN---PGARVLVVCS  198 (402)
Q Consensus       185 i~~g---~~~~vLvv~~  198 (402)
                      ++.|   +.+++|+++.
T Consensus       336 ~~~g~~~~Gd~vll~~f  352 (365)
T 3gwa_A          336 RANGTLARGMRLMLLGF  352 (365)
T ss_dssp             HHTTCCCTTCEEEEEEE
T ss_pred             HHcCCCCCCCEEEEEEE
Confidence            4444   3578888773

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=92.66  E-value=0.37  Score=44.82  Aligned_cols=83  Identities=10%  Similarity=0.001  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-e--eeccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-M--IYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-~--~i~~~C~~~~~al~~A~~~i  185 (402)
                      ..+-..++++++|+++|++++|||.++......    ..-..+.+.||++...... .  .-+..+++.+.+|..+   +
T Consensus       210 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~----~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~~---~  282 (313)
T 1zow_A          210 AVRIMGDASTRVVEKANLTSDDIDLFIPHQANI----RIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQE---L  282 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCH----HHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCH----HHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHHH---H
Confidence            345667889999999999999999887643211    1224577889987542111 1  1244566666666443   4


Q ss_pred             HcC---CCCeEEEEEe
Q 044410          186 ENN---PGARVLVVCS  198 (402)
Q Consensus       186 ~~g---~~~~vLvv~~  198 (402)
                      +.+   +.+++|+++.
T Consensus       283 ~~~~~~~g~~vl~~~~  298 (313)
T 1zow_A          283 KNGKLKDDDTIVLVGF  298 (313)
T ss_dssp             HTTCCCTTCEEEEEEE
T ss_pred             HcCCCCCCCEEEEEEE
Confidence            444   3577777763

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=92.61  E-value=0.31  Score=45.97  Aligned_cols=83  Identities=8%  Similarity=-0.008  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~i  185 (402)
                      ..+...++.+++|+++|++++|||.++.... .   ...-..+.+.||++..... .+.  -+.++++...+|..+   +
T Consensus       222 ~~~~~~~~i~~aL~~agl~~~did~~~~H~~-~---~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~  294 (331)
T 2x3e_A          222 AVTQMSDSVRRVLDRVGWQASDLHHLVPHQA-N---TRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALAHG---L  294 (331)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC-C---HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-C---HHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHHHH---H
Confidence            4466778899999999999999998876332 2   1123458889999754211 111  244556666666433   4


Q ss_pred             HcC---CCCeEEEEEe
Q 044410          186 ENN---PGARVLVVCS  198 (402)
Q Consensus       186 ~~g---~~~~vLvv~~  198 (402)
                      +.+   +.+++|+++.
T Consensus       295 ~~~~~~~G~~vll~~~  310 (331)
T 2x3e_A          295 RQGILRDGGNMVLTGF  310 (331)
T ss_dssp             HTTCSCTTCEEEEEEE
T ss_pred             HhCCCCCCCEEEEEEE
Confidence            444   3567877763

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=92.46  E-value=0.32  Score=46.46  Aligned_cols=82  Identities=10%  Similarity=-0.002  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHH-
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI----YTQGCYMGGTVIRLAKD-  183 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~----i~~~C~~~~~al~~A~~-  183 (402)
                      ......++++++|+++|++++|||.++....    ....-..++++||++.... ...    -+.++++-..+|..+.. 
T Consensus       242 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~----~~~i~~~~~~~Lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~~~~  316 (354)
T 4efi_A          242 TLNAVPKLVSRTLDIAGRDKDSYDAFLFHQA----NLFMLKHLAKKAGLPAERV-PVNIGEYGNTSCASIPLLITTELKD  316 (354)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCSEEEECCC----CHHHHHHHHHHTTCCGGGS-CCCHHHHCBCGGGHHHHHHHHHSHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHhCcCHHHH-HHHHhhhCcHHHHHHHHHHHHHHHh
Confidence            4566778899999999999999999876432    2234467899999986532 111    35577777777765532 


Q ss_pred             -HHHcCCCCeEEEEE
Q 044410          184 -IAENNPGARVLVVC  197 (402)
Q Consensus       184 -~i~~g~~~~vLvv~  197 (402)
                       .++.  .+++|+++
T Consensus       317 g~~~~--Gd~vll~~  329 (354)
T 4efi_A          317 RLKEE--TLQLGMFG  329 (354)
T ss_dssp             HHHHS--CEEEEEEE
T ss_pred             CCCCC--CCEEEEEE
Confidence             3443  47888776

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=92.43  E-value=0.33  Score=45.87  Aligned_cols=82  Identities=13%  Similarity=0.012  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc-ccc-ce--eeccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS-VNR-LM--IYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~-~~~-~~--~i~~~C~~~~~al~~A~~~  184 (402)
                      ..+-..++++++|+++|++++|||.++... +.   ...-..+.+.||++.. ... .+  .-+.++++.+.+|..+   
T Consensus       229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~-~~---~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~---  301 (339)
T 1mzj_A          229 AVADVVPAAREALEVAGLTVGDLVAFVPHQ-AN---LRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRL---  301 (339)
T ss_dssp             HHHHHHHHHHHHHHTTTCCGGGCSEEEECC-SC---HHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEECC-CC---HHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHH---
Confidence            345667889999999999999999887633 22   1123468889999765 210 11  1244556666665433   


Q ss_pred             HHcC---CCCeEEEEE
Q 044410          185 AENN---PGARVLVVC  197 (402)
Q Consensus       185 i~~g---~~~~vLvv~  197 (402)
                      ++.+   +.+++|+++
T Consensus       302 ~~~g~~~~G~~vll~~  317 (339)
T 1mzj_A          302 VRSGAVPGGGPALMIG  317 (339)
T ss_dssp             HHHTSSCTTCEEEEEE
T ss_pred             HHcCCCCCCCEEEEEE
Confidence            4444   357787776

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=92.37  E-value=0.42  Score=44.34  Aligned_cols=83  Identities=10%  Similarity=0.007  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc---eeeccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL---MIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~---~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ..+...++++++|+++|++++|||.++.... .   ......+.+.||++......   ..-+..+++.+.+|..+   +
T Consensus       208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~-~---~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~  280 (309)
T 2ebd_A          208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQA-N---VRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---I  280 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCSEEEECCS-C---HHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCC-C---HHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---H
Confidence            4456778999999999999999998776332 2   11224578899987542110   11244566666666443   4


Q ss_pred             HcC---CCCeEEEEEe
Q 044410          186 ENN---PGARVLVVCS  198 (402)
Q Consensus       186 ~~g---~~~~vLvv~~  198 (402)
                      +.+   +.+++|+++.
T Consensus       281 ~~g~~~~G~~~l~~~~  296 (309)
T 2ebd_A          281 KEGKVKRGDLILMTAM  296 (309)
T ss_dssp             HTTCCCTTCEEEEEEE
T ss_pred             HcCCCCCCCEEEEEEE
Confidence            444   3578887764

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=91.94  E-value=0.45  Score=44.76  Aligned_cols=86  Identities=13%  Similarity=0.073  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc-cc-cce--eeccccchHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS-VN-RLM--IYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~-~~-~~~--~i~~~C~~~~~al~~A~~~  184 (402)
                      ......++++++|+++|++++|||.++.....    ...-..+.+.||++.. .. ...  .-+.++++...+|..+..-
T Consensus       230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~----~~~~~~~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~~~~  305 (335)
T 1u6e_A          230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQAN----SRINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAELLTT  305 (335)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSC----HHHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHHHHc
Confidence            35567788999999999999999988764322    1233457889999765 21 011  1244555555555443321


Q ss_pred             HHcCCCCeEEEEEe
Q 044410          185 AENNPGARVLVVCS  198 (402)
Q Consensus       185 i~~g~~~~vLvv~~  198 (402)
                      -+..+.+++|+++.
T Consensus       306 ~~~~~g~~~l~~~~  319 (335)
T 1u6e_A          306 GAAKPGDLALLIGY  319 (335)
T ss_dssp             TSSCTTCEEEEEEE
T ss_pred             CCCCCCCEEEEEEE
Confidence            11123577887763

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=91.23  E-value=0.67  Score=43.28  Aligned_cols=82  Identities=16%  Similarity=0.039  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-ce--eeccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LM--IYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~--~i~~~C~~~~~al~~A~~~i  185 (402)
                      ..+-..++++++|+++|++++|||.++.......    .-..+.+.||++..... ..  .-+..+++.+.+|..   ++
T Consensus       218 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~----~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~---~l  290 (322)
T 1ub7_A          218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLR----IIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKE---AV  290 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH----HHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH----HHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHH---HH
Confidence            4456778999999999999999998876332211    22357888998753211 11  123455555555543   34


Q ss_pred             HcC---CCCeEEEEE
Q 044410          186 ENN---PGARVLVVC  197 (402)
Q Consensus       186 ~~g---~~~~vLvv~  197 (402)
                      +.+   +.+++|+++
T Consensus       291 ~~g~~~~g~~~l~~~  305 (322)
T 1ub7_A          291 DAGRIREGDHVLLVS  305 (322)
T ss_dssp             HHTSSCTTCEEEEEE
T ss_pred             HhCCCCCCCEEEEEE
Confidence            444   346777665

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=88.58  E-value=0.66  Score=44.98  Aligned_cols=83  Identities=14%  Similarity=0.055  Sum_probs=51.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHc-CC--CCcccccee-----eccccchHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLL-GL--KPSVNRLMI-----YTQGCYMGGTVIR  179 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~L-Gl--~~~~~~~~~-----i~~~C~~~~~al~  179 (402)
                      .+.....++++++|+++|++++|||.++. +.   ..+.+-..++++| |+  +...  ...     -+.++++-..+|.
T Consensus       288 ~a~~~~~~~i~~~L~~~gl~~~dId~~v~-Hq---an~~i~~~~~~~llgl~~~~~k--~~~~l~~~GNtssAsipl~L~  361 (392)
T 3led_A          288 EVVPLVSEMIIEHAREIGIDPHGLKRMWL-HQ---ANINMNEIIGRKVLGRDPTRDE--NVIILDDYANTSSAGSIIAFH  361 (392)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCGGGCSEEEE-CS---SCHHHHHHHHHHHHTSCCCTTT--BCCCHHHHCBCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCcEEEE-cC---CCHHHHHHHHHHhcCCCCCHHH--HHHHHhhhCccHHHHHHHHHH
Confidence            45667788899999999999999998875 32   1223445677775 75  3221  221     3456666666665


Q ss_pred             HHHHHHHcCCCCeEEEEEe
Q 044410          180 LAKDIAENNPGARVLVVCS  198 (402)
Q Consensus       180 ~A~~~i~~g~~~~vLvv~~  198 (402)
                      .+...+  .+.+++|+++.
T Consensus       362 ~~~~~~--~~Gd~vll~gf  378 (392)
T 3led_A          362 KHQDDM--AQGDLGLICSF  378 (392)
T ss_dssp             HCCTTC--CTTCEEEEEEE
T ss_pred             HHhCCC--CCCCEEEEEEE
Confidence            542222  23577777763

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=88.24  E-value=1  Score=43.57  Aligned_cols=83  Identities=11%  Similarity=0.049  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc----e-ee-ccccchHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL----M-IY-TQGCYMGGTVIRLAK  182 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~----~-~i-~~~C~~~~~al~~A~  182 (402)
                      ..+-..++++++|+++|++++|||.++.... .   ...-..+.++||++......    . .+ +.++++...+|   .
T Consensus       285 ~~~~~~~~i~~aL~~agl~~~dId~~~~H~~-~---~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L---~  357 (393)
T 1ted_A          285 IFSGVAPVVTEMLWDNGLQISDIDLWAIHPG-G---PKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---E  357 (393)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCSCEEECCS-C---HHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHcCCCHhHCCEEEECCC-c---HHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHH---H
Confidence            4455667889999999999999998876332 2   12335688899998653210    1 12 22334444444   3


Q ss_pred             HHHHcC----CCCeEEEEEe
Q 044410          183 DIAENN----PGARVLVVCS  198 (402)
Q Consensus       183 ~~i~~g----~~~~vLvv~~  198 (402)
                      .+++.+    +.+++|+++.
T Consensus       358 ~~~~~g~~~~~Gd~vll~~~  377 (393)
T 1ted_A          358 TMVQQAESAKAISTGVAFAF  377 (393)
T ss_dssp             HHHHSCSSSSSSEEEEEEEE
T ss_pred             HHHhcCccCCCCCeEEEEEe
Confidence            444554    3467777663

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=87.79  E-value=0.69  Score=44.20  Aligned_cols=82  Identities=24%  Similarity=0.240  Sum_probs=53.1

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-----ccccchHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY-----TQGCYMGGTVIRLAK  182 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i-----~~~C~~~~~al~~A~  182 (402)
                      .......++++++|+++|++++|||.+|+.+......    ..++++||++.... ...+     +.++++-..+|..+ 
T Consensus       235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~~----~~~~~~lgl~~ek~-~~~~~~~~GNt~aAsipl~L~~~-  308 (357)
T 3s3l_A          235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGTG----HELHDLLGLPDERT-SWAYGRTTGHVGAGDQYAGLAHL-  308 (357)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCSS----CCHHHHHTSCGGGB-THHHHHHHCBCTTCHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHH----HHHHHHcCCCHHHh-HHHhccccccchHhHHHHHHHHH-
Confidence            3556778899999999999999999998644433113    34678899987542 2222     23456666666444 


Q ss_pred             HHHHcC---CCCeEEEEE
Q 044410          183 DIAENN---PGARVLVVC  197 (402)
Q Consensus       183 ~~i~~g---~~~~vLvv~  197 (402)
                        ++.|   +.+++|+++
T Consensus       309 --~~~g~l~~Gd~vll~~  324 (357)
T 3s3l_A          309 --VENALVQPGDRVLLFG  324 (357)
T ss_dssp             --HHTTCCCTTCEEEEEC
T ss_pred             --HHcCCCCCCCEEEEEE
Confidence              3444   356777665

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=86.60  E-value=1.1  Score=43.19  Aligned_cols=79  Identities=19%  Similarity=0.138  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc----ee--eccccchHHHHHHHHHHH
Q 044410          111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL----MI--YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~----~~--i~~~C~~~~~al~~A~~~  184 (402)
                      +-.. +++++|+++|++++|||.++......    ..-..+.++||++......    ..  -+.++++...+|   ..+
T Consensus       253 ~~~~-~i~~aL~~agl~~~dId~v~~H~~~~----~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L---~~~  324 (382)
T 1u0m_A          253 PLAP-ALKELAGEHGWDASDLDFYIVHAGGP----RILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDAL---RRL  324 (382)
T ss_dssp             HHHH-HHHHHHHTTSCCSSCCSCCEEECSHH----HHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHH---HHH
T ss_pred             HHHH-HHHHHHHHcCCCHHHCCEEEECCCCH----HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHH---HHH
Confidence            3344 89999999999999999887744321    1234688899998653211    11  233445555554   344


Q ss_pred             HHcC---CCCeEEEEE
Q 044410          185 AENN---PGARVLVVC  197 (402)
Q Consensus       185 i~~g---~~~~vLvv~  197 (402)
                      ++.+   +.+++|+++
T Consensus       325 ~~~g~~~~Gd~vll~~  340 (382)
T 1u0m_A          325 FDEGGVEEGARGLLAG  340 (382)
T ss_dssp             HHSCCCCSSCCCEEEE
T ss_pred             HHhcCCCCCCEEEEEE
Confidence            4555   245666554

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=86.57  E-value=0.94  Score=43.82  Aligned_cols=79  Identities=14%  Similarity=0.097  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee------eccccchHHHHHHHHHHHHH
Q 044410          113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI------YTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~------i~~~C~~~~~al~~A~~~i~  186 (402)
                      ...|++++|+++|++++|||++.+..    ........+.+.||+.........      ...+|+|....+.+..++-.
T Consensus       296 ~~~ai~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~  371 (395)
T 4e1l_A          296 PIPATRKALKKAGLSINDIDLIEANE----AFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQK  371 (395)
T ss_dssp             HHHHHHHHHHHTTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEecC----hhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHh
Confidence            35789999999999999999988522    122344567888998754311111      11145555555555555444


Q ss_pred             cCCCCeEEEE
Q 044410          187 NNPGARVLVV  196 (402)
Q Consensus       187 ~g~~~~vLvv  196 (402)
                      . ..++.|+.
T Consensus       372 ~-~~~~gl~~  380 (395)
T 4e1l_A          372 R-KVETGLAT  380 (395)
T ss_dssp             H-TCSEEEEE
T ss_pred             c-CCCEEEEE
Confidence            3 35666643

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=84.89  E-value=2.4  Score=45.98  Aligned_cols=76  Identities=8%  Similarity=-0.087  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc----e--eeccccchHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL----M--IYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~----~--~i~~~C~~~~~al~~A~  182 (402)
                      ......++++++|+++|++++|||.++....    ....-..+.++||++......    .  --+.++++-..+|..+.
T Consensus       862 ~~~~~~~~~~~al~~agl~~~did~~~~Hq~----~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~  937 (979)
T 3tsy_A          862 ISENVEKCLTQAFDPLGISDWNSLFWIAHPG----GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR  937 (979)
T ss_dssp             HHHHHHHHHHHHHGGGTCCCGGGSEEEECCS----CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCcccceEEECCC----ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHH
Confidence            5566778999999999999999998765321    123446788999998753211    1  14668888888888777


Q ss_pred             HHHHcC
Q 044410          183 DIAENN  188 (402)
Q Consensus       183 ~~i~~g  188 (402)
                      .-++.|
T Consensus       938 ~~~~~G  943 (979)
T 3tsy_A          938 KKSLKG  943 (979)
T ss_dssp             HHHHHT
T ss_pred             hhhccc
Confidence            666555

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=84.16  E-value=1.5  Score=42.29  Aligned_cols=44  Identities=11%  Similarity=0.092  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410          113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS  160 (402)
Q Consensus       113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~  160 (402)
                      ...|++++|+++|++++|||++.+..    ........+.+.||+...
T Consensus       294 ~~~a~~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~~  337 (394)
T 3ss6_A          294 PAPAIRKGLEKVDWSLEDADLLEINE----AFAAQYLAVEKELDLDRE  337 (394)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGG
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEeCC----chHHHHHHHHHHhCCCCC
Confidence            46789999999999999999988522    122345567888998764

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=83.58  E-value=2  Score=40.92  Aligned_cols=81  Identities=9%  Similarity=-0.032  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHcC------CCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc----ee--eccccchHHH
Q 044410          109 VPKLGKEAALKAIKEWG------QPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL----MI--YTQGCYMGGT  176 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag------~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~----~~--i~~~C~~~~~  176 (402)
                      ..+...++++++|+++|      ++++|||.+ . +...   ...-..+.++||++......    ..  -+.++++...
T Consensus       265 ~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~-H~~~---~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~  339 (374)
T 2h84_A          265 IGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-I-HTGG---KSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIF  339 (374)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-E-CCCC---HHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCccccCCChhhcCEe-E-CCCC---HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHH
Confidence            34556678999999999      999999988 3 4332   12335688999998653210    11  2445555555


Q ss_pred             HHHHHHHHHHcC-CCCeEEEEE
Q 044410          177 VIRLAKDIAENN-PGARVLVVC  197 (402)
Q Consensus       177 al~~A~~~i~~g-~~~~vLvv~  197 (402)
                      +|..+   ++.+ +.+++|+++
T Consensus       340 ~L~~~---~~~~~~Gd~vll~~  358 (374)
T 2h84_A          340 VMDHA---RKSKSLPTYSISLA  358 (374)
T ss_dssp             HHHHH---HTCSCCCSEEEEEE
T ss_pred             HHHHH---HhhcCCCCeEEEEE
Confidence            55443   3444 467777776

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=83.22  E-value=3.3  Score=41.63  Aligned_cols=81  Identities=17%  Similarity=0.112  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee--------ccccchHHHHHHHHHHH
Q 044410          113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY--------TQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i--------~~~C~~~~~al~~A~~~  184 (402)
                      ...|++++|+++|++++|||++=+..    .++...-...+.||+...-..-..+        +-..++++.++.-+..-
T Consensus       319 ~~~a~~~al~~agl~~~did~~E~~d----AF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~  394 (520)
T 4egv_A          319 SVTAVNEALRVAGIGLDDVAAFDLYS----CFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNE  394 (520)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEEEEECC----SSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHCCEEEEeC----CcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHH
Confidence            46789999999999999999876543    3455667778899985431101122        22345667777666666


Q ss_pred             HHcCCCCeEEEEE
Q 044410          185 AENNPGARVLVVC  197 (402)
Q Consensus       185 i~~g~~~~vLvv~  197 (402)
                      |+.+..++.|+.+
T Consensus       395 lr~~~~~~~L~~~  407 (520)
T 4egv_A          395 MRDKPGQFALVGA  407 (520)
T ss_dssp             HHHSTTCEEEEEE
T ss_pred             HhcCCCCceEEeC
Confidence            7777788888754

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=82.31  E-value=2.7  Score=40.43  Aligned_cols=44  Identities=18%  Similarity=0.221  Sum_probs=31.7

Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410          113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS  160 (402)
Q Consensus       113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~  160 (402)
                      ...|++++|+++|++++|||++-...    .+...+-.+.+.||+...
T Consensus       292 ~~~a~~~al~~agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~~~  335 (392)
T 2vu1_A          292 PIPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDPS  335 (392)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCGG
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEecc----ccHHHHHHHHHHcCCCcc
Confidence            36799999999999999999887521    122233346788998753

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=81.75  E-value=1.9  Score=41.60  Aligned_cols=44  Identities=16%  Similarity=0.173  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410          113 GKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS  160 (402)
Q Consensus       113 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~  160 (402)
                      ...|++++|+++|++++|||++-+..    ........+.+.||+...
T Consensus       297 ~~~a~~~al~~Agl~~~dId~ve~~d----~f~~~~~~~~~~lg~~~~  340 (396)
T 4dd5_A          297 PVPATKKALEAANMTIEDIDLVEANE----AFAAQSVAVIRDLNIDMN  340 (396)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCTT
T ss_pred             HHHHHHHHHHHcCCCHHHcCEEEecC----hHHHHHHHHHHHhCCCCC
Confidence            46789999999999999999887522    122334456778898653

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=81.15  E-value=2.6  Score=40.88  Aligned_cols=43  Identities=12%  Similarity=0.194  Sum_probs=31.7

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 044410          114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPS  160 (402)
Q Consensus       114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~  160 (402)
                      ..|++++|+++|++++|||++-+..+    .........+.||+...
T Consensus       308 ~~a~~~al~~Agl~~~dId~~e~hda----f~~~~l~~~~~lg~~~~  350 (407)
T 3svk_A          308 TPATRKVLDRAGLTIDDIDLFELNEA----FASVVLKFQKDLNIPDE  350 (407)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHHTCCGG
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEEeCh----hHHHHHHHHHHhCCCCC
Confidence            57899999999999999998876322    11223456788998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	402
d1teda_	372	c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte	1e-100
d1bi5a1	235	c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med	1e-69
d1bi5a2	154	c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M	5e-53
d1ee0a2	160	c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon	8e-53
d1u0ua2	156	c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S	1e-49
d1u0ma1	200	c.95.1.2 (A:2-201) Putative polyketide synthase SC	3e-43
d1u0ma2	148	c.95.1.2 (A:202-349) Putative polyketide synthase	6e-33
d1xpma1	166	c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA	4e-14
d1u6ea1	184	c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (Fa	1e-11
d1mzja2	153	c.95.1.2 (A:184-336) Priming beta-ketosynthase fro	1e-08
d1hnja1	174	c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH	3e-08
d1ub7a1	172	c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH	6e-08
d1u6ea2	148	c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa	1e-07
d1mzja1	181	c.95.1.2 (A:3-183) Priming beta-ketosynthase from	7e-07
d1hnja2	143	c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa	7e-05

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  300 bits (769), Expect = e-100
 Identities = 90/374 (24%), Positives = 171/374 (45%), Gaps = 13/374 (3%)

Query: 22  PTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTE 81
             A I  + T TP     Q+D  D   RV         +E+  R+ ++  I  R   +  
Sbjct: 10  TVAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRITTRRMAV-- 64

Query: 82  EILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG 141
           + L    ++   E  ++  R  +  +    L  + + +A+       ++I  L+ +   G
Sbjct: 65  DPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG 124

Query: 142 VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR 201
              PG DV +++ LGL PS++R+++   GC      +  A +    +P  + LVVC ++ 
Sbjct: 125 FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIEL- 183

Query: 202 VLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENY 261
               +      ++ +V+ ++FGDG  A +IGA       E     + S     + +TE+ 
Sbjct: 184 -CSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDG 242

Query: 262 ISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQV 321
           I   +   G  C LS ++P  I + V   ++  +   G+   +   + +HPGG  +++Q 
Sbjct: 243 IVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQS 302

Query: 322 EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGF 381
            ++LG+  E    S  VL  +GNM + S+ F+L+ + +      +A + + +  GV F F
Sbjct: 303 VRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQ------QAESAKAISTGVAFAF 356

Query: 382 GPGLTVETVVLQSV 395
           GPG+TVE ++   +
Sbjct: 357 GPGVTVEGMLFDII 370

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

 Score =  217 bits (553), Expect = 1e-69
 Identities = 150/224 (66%), Positives = 182/224 (81%), Gaps = 2/224 (0%)

Query: 20  QGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHL 79
           +GP ATILAIGT+ P NC  Q+ YPDFYF++TNS+HKTELKEKF+R+C++  IK+RY +L
Sbjct: 14  EGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYL 72

Query: 80  TEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAF 139
           TEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQP SKITHLI    
Sbjct: 73  TEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTT 132

Query: 140 YGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSD 199
            GVDMPGAD +L +LLGL+P V R M+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+
Sbjct: 133 SGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192

Query: 200 IRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESP 243
           +  + F  PS+THLD LV QA+FGDGA A I+G+D  +   E P
Sbjct: 193 VTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSD-PVPEIEKP 235

>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

 Score =  171 bits (435), Expect = 5e-53
 Identities = 84/153 (54%), Positives = 109/153 (71%)

Query: 244 LFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDW 303
           +F+++   QT  PD+E  I G L+E G   HL +DVP  +   + K L  A  P+GISD+
Sbjct: 1   IFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDY 60

Query: 304 NSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIE 363
           NS+F++ HPGG  +LDQVE+ L L+ EK+ A+R VL EYGNM +  V FILDE+RKKS +
Sbjct: 61  NSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQ 120

Query: 364 EMKATTGEGLECGVLFGFGPGLTVETVVLQSVS 396
               TTGEGLE GVLFGFGPGLT+ETVVL+SV+
Sbjct: 121 NGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA 153

>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Pyrone synthase (PyS, chalcone synthase 2)
species: Gerbera hybrid cultivar [TaxId: 18101]

 Score =  171 bits (434), Expect = 8e-53
 Identities = 88/155 (56%), Positives = 119/155 (76%)

Query: 241 ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGI 300
           E P+F+I+S  QT +PDTE  +   L+E G    L RDVP+ +   ++     A+SP+GI
Sbjct: 3   ERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGI 62

Query: 301 SDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK 360
           +DWNS+F++VHPGG  +LDQVE+ L L+++KL ASR+VL EYGN+ +  V FI+DEVRK+
Sbjct: 63  TDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKR 122

Query: 361 SIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSV 395
           S+ E K+TTGEGL+CGVLFGFGPG+TVETVVL+SV
Sbjct: 123 SMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSV 157

>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Dihydropinosylvin synthase
species: Scots pine (Pinus sylvestris) [TaxId: 3349]

 Score =  163 bits (413), Expect = 1e-49
 Identities = 79/154 (51%), Positives = 103/154 (66%)

Query: 244 LFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDW 303
            F+I+   QT VP++E  I G+++E+G    L   VP  I   ++ C+  A S   ISDW
Sbjct: 2   CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDW 61

Query: 304 NSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIE 363
           N LF+VVHPGG  +LD+VE  L L   KL  +R+V+ EYGNM +  V FILD+ RK S++
Sbjct: 62  NKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQ 121

Query: 364 EMKATTGEGLECGVLFGFGPGLTVETVVLQSVST 397
              +TTGEGLE GVLFGFGPGLT+ETVVL+SV  
Sbjct: 122 NGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 155

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  147 bits (373), Expect = 3e-43
 Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 12/211 (5%)

Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           AT+     S P +     +  +   R      +        R+ E   ++ R+     E 
Sbjct: 1   ATLCRPSVSVPEHVITMEETLELARRRHTDHPQLP---LALRLIENTGVRTRHIVQPIED 57

Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
             E+P          + R  +   E          +A+ +     + I  +I+ +  G  
Sbjct: 58  TLEHP--------GFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM 109

Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 203
           MP     L+  +G   +  ++ I   GC  GG  I  A D     P A  L+V  +   L
Sbjct: 110 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL 169

Query: 204 DFHEPSETHLDVLVVQAVFGDGAGAAIIGAD 234
            +  P++  +  L+   +FGDG  AA++   
Sbjct: 170 CYQ-PTDLGVGSLLCNGLFGDGIAAAVVRGR 199

>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  118 bits (298), Expect = 6e-33
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)

Query: 245 FQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWN 304
            ++       +P TE++I   +K  G +  L + VP A    +   L       G    +
Sbjct: 4   VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVP-ATMEPLAPALKELAGEHGWDASD 62

Query: 305 SLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE 364
             FY+VH GG  +LD +   L +       SR  L EYGN+ +  V        ++  +E
Sbjct: 63  LDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLD----ALRRLFDE 118

Query: 365 MKATTGEGLECGVLFGFGPGLTVETVVLQ 393
                G     G+L GFGPG+T E  +  
Sbjct: 119 GGVEEG---ARGLLAGFGPGITAEMSLGC 144

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 166

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

 Score = 67.9 bits (165), Expect = 4e-14
 Identities = 32/209 (15%), Positives = 51/209 (24%), Gaps = 48/209 (22%)

Query: 26  ILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILK 85
           I  I    P               V  +      +    +        +       +   
Sbjct: 4   IDKINFYVPKYY------------VDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQ--- 48

Query: 86  ENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMP 145
           +  +M                         A         +   KI  +I +    VD  
Sbjct: 49  DIVSMG------------------------ANAAKDIITDEDKKKIGMVIVATESAVDAA 84

Query: 146 GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF 205
            A    +  L       R     + CY     I+LAKD     P  +VLV+ +D      
Sbjct: 85  KAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYGL 144

Query: 206 HEPSETHLDVLVVQAVFGDGAGAAIIGAD 234
           +   E            G GA A +I  +
Sbjct: 145 NSGGE---------PTQGAGAVAMVIAHN 164

>d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 184

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.7 bits (146), Expect = 1e-11
 Identities = 37/227 (16%), Positives = 67/227 (29%), Gaps = 49/227 (21%)

Query: 13  MTTVKSNQGP-TATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQS 71
           MT + +  G  +  +L++G   P               VTN +    +    + I  R  
Sbjct: 1   MTEIATTSGARSVGLLSVGAYRPER------------VVTNDEICQHIDSSDEWIYTRTG 48

Query: 72  IKKRYFHLTEEILKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKI 131
           IK R F   +E                                EA  +A+   G   + I
Sbjct: 49  IKTRRFAADDESAASMAT-------------------------EACRRALSNAGLSAADI 83

Query: 132 THLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGA 191
             +I +             ++        +    +   G    G  +  A D+      A
Sbjct: 84  DGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLS-AGAAGFGYALGAAADMIRGGGAA 142

Query: 192 RVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD 236
            +LVV ++     +D ++             +F DGA A ++G    
Sbjct: 143 TMLVVGTEKLSPTIDMYDRG--------NCFIFADGAAAVVVGETPF 181

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

 Score = 51.2 bits (122), Expect = 1e-08
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 9/108 (8%)

Query: 285 NYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGN 344
             V      A+   G++  + + +V H     ++D +   LG+ +  + +      + GN
Sbjct: 48  ADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVS--RDAEDTGN 105

Query: 345 MGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVL 392
             + SV   LD +    +       G      ++ GFG GL+     L
Sbjct: 106 TSSASVALALDRL----VRSGAVPGG---GPALMIGFGAGLSYAGQAL 146

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 174

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

 Score = 50.6 bits (120), Expect = 3e-08
 Identities = 37/216 (17%), Positives = 68/216 (31%), Gaps = 50/216 (23%)

Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
             I+  G+  P                TN+D +  +    + I  R  I++R+     E 
Sbjct: 3   TKIIGTGSYLPEQ------------VRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNET 50

Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
           +                                  +AI+  G    +I  ++ +      
Sbjct: 51  VSTMGFEAAT-------------------------RAIEMAGIEKDQIGLIVVATTSATH 85

Query: 144 -MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI-- 200
             P A  ++  +LG+K      +      +     +  A    ++      LVV SD+  
Sbjct: 86  AFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSV--ADQYVKSGAVKYALVVGSDVLA 143

Query: 201 RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD 236
           R  D  +     +        FGDGAGAA++ A  +
Sbjct: 144 RTCDPTDRGTIII--------FGDGAGAAVLAASEE 171

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 172

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

 Score = 49.9 bits (118), Expect = 6e-08
 Identities = 32/215 (14%), Positives = 69/215 (32%), Gaps = 49/215 (22%)

Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           + ILA+G   P               +TN+D +  L    + I  R  IK+R     +E 
Sbjct: 1   SGILALGAYVPER------------VMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEY 48

Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
             +                                  ++     +  +  +I +      
Sbjct: 49  TSDLAFKAVE-------------------------DLLRRHPGALEGVDAVIVATNTPDA 83

Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI--R 201
           +      L++      +    ++     ++       A  + E     +VL V ++   +
Sbjct: 84  LFPDTAALVQARFGLKAFAYDLLAGCPGWIYALAQ--AHALVEAGLAQKVLAVGAEALSK 141

Query: 202 VLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD 236
           ++D+++ +   L        FGDG GAA++G   +
Sbjct: 142 IIDWNDRATAVL--------FGDGGGAAVVGKVRE 168

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 48.6 bits (115), Expect = 1e-07
 Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 31/175 (17%)

Query: 220 AVFG-DGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRD 278
            V G DG  A  I  D D                        ++  +             
Sbjct: 3   TVAGSDGEQADAIRQDIDWITFA-----------QNPSGPRPFVRLE----------GPA 41

Query: 279 VPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHPGGDGLLDQVEKTLGLRKEKLWASRYV 338
           V       +      AM   G+       +V H     + + + K L LR + + A    
Sbjct: 42  VFRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVA--ND 99

Query: 339 LREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQ 393
           +   GN  A S+   + E+    +    A  G   +  +L G+G GL+    V++
Sbjct: 100 IEHTGNTSAASIPLAMAEL----LTTGAAKPG---DLALLIGYGAGLSYAAQVVR 147

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 181

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

 Score = 46.8 bits (110), Expect = 7e-07
 Identities = 36/215 (16%), Positives = 62/215 (28%), Gaps = 48/215 (22%)

Query: 24  ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEI 83
           + +L +G+  P               V+N +  T +    + I  R  I+ R     +E 
Sbjct: 10  SRVLGVGSYRPRR------------EVSNKEVCTWIDSTEEWIETRTGIRSRRIAEPDE- 56

Query: 84  LKENPNMCCYEAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVD 143
                 +    A       A +      L                      + S      
Sbjct: 57  ---TIQVMGVAASRRALEHAGVDPAEIDLV---------------------VVSTMTNFV 92

Query: 144 MPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI--R 201
                   +       +     +    C      + +A D  E+     VLVV ++    
Sbjct: 93  HTPPLSVAIAHELGADNAGGFDLS-AACAGFCHALSIAADAVESGGSRHVLVVATERMTD 151

Query: 202 VLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD 236
           V+D  + S + L        FGDGAGAA++G    
Sbjct: 152 VIDLADRSLSFL--------FGDGAGAAVVGPSDV 178

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

 Score = 40.6 bits (94), Expect = 7e-05
 Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 20/141 (14%)

Query: 253 TTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSLFYVVHP 312
              P+   +++    E+                 +   +   ++   +      + V H 
Sbjct: 22  RVNPENSIHLTMAGNEVFKVAV----------TELAHIVDETLAANNLDRSQLDWLVPHQ 71

Query: 313 GGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEG 372
               ++    K LG+  + +  +      +GN  A SV   LDE     + + +   G+ 
Sbjct: 72  ANLRIISATAKKLGMSMDNVVVTLD---RHGNTSAASVPCALDEA----VRDGRIKPGQ- 123

Query: 373 LECGVLFGFGPGLTVETVVLQ 393
               +L  FG G T  + +++
Sbjct: 124 --LVLLEAFGGGFTWGSALVR 142

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	402
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	100.0
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	100.0
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	100.0
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	100.0
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	100.0
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	100.0
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	100.0
d1ee0a2	160	Pyrone synthase (PyS, chalcone synthase 2) {Gerber	99.97
d1bi5a2	154	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	99.97
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	99.97
d1u0ua2	156	Dihydropinosylvin synthase {Scots pine (Pinus sylv	99.97
d1u0ma2	148	Putative polyketide synthase SCO1206 {Streptomyces	99.96
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	99.93
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	99.93
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	99.93
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	99.92
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	99.14
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	99.12
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	99.09
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	99.04
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	98.99
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	98.94
d1xpma2	221	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	98.81
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	98.8
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	98.76
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	98.65
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	98.43
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	98.37
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	98.17
d1tqya2	205	Actinorhodin polyketide putative beta-ketoacyl syn	97.43
d1tqyb2	194	Actinorhodin polyketide putative beta-ketoacyl syn	97.35
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	96.57
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	96.31
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	96.18
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	95.76
d1e5ma2	161	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	95.47
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	95.46
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	95.11
d1j3na2	159	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	94.74
d1ox0a2	158	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	94.14
d2gfva2	161	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	94.06
d1ulqa2	125	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	93.67
d1u0ma2	148	Putative polyketide synthase SCO1206 {Streptomyces	92.01
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	89.55
d2ix4a2	161	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	89.46
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	87.73
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	86.94
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	85.94
d2vbaa2	151	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	83.8

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-60  Score=469.35  Aligned_cols=358  Identities=24%  Similarity=0.404  Sum_probs=301.8

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      .+|.|+|+|+|+++++|+|+.+.+.......   ...++..+|++++||++||++.++..  ..+++.....|.+.+|+.
T Consensus        12 a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~---~~~~~~~ri~~~tGI~~R~~~~~~~~--~~~~~~~~~~~~~~~r~~   86 (372)
T d1teda_          12 AVIEGLATGTPRRVVNQSDAADRVAELFLDP---GQRERIPRVYQKSRITTRRMAVDPLD--AKFDVFRREPATIRDRMH   86 (372)
T ss_dssp             EEEEEEEEECCSCEEEHHHHHHHHHTC-------CCTTHHHHHHHTSCCSEEECSSCTTS--TTHHHHTTCSSCHHHHHH
T ss_pred             EEEEEEEEeCCCeEEcHHHHHHHHHhhcCCh---HHHHHHHHHHHccCCcccceeccccc--cchhhhhhcCCCHHHHHH
Confidence            7899999999999999999999875422111   11245678999999999999876421  122223344678999999


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY-TQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i-~~~C~~~~~al~~A~  182 (402)
                      .+.+++.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++. .+++ ++||+|++.||++|.
T Consensus        87 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~-~~~~~~~gC~g~~~aL~~A~  165 (372)
T d1teda_          87 LFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSIS-RVVVNFMGCAAAMNALGTAT  165 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCcee-EeeccccCccHHHHHHHHHH
Confidence            99999999999999999999999999999999999888889999999999999988764 4555 469999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCCCCCCCCCceEEEeeeeeecCCCcccc
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSDISNHESPLFQILSCTQTTVPDTENYI  262 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  262 (402)
                      ++|++|+.++||||++|.+|..+...  .+.+++.+.++|||||+|+||++++.........+.+.+..+..+|.+.+.+
T Consensus       166 ~~l~sg~~~~~LVV~~E~~s~~~~~~--d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (372)
T d1teda_         166 NYVRAHPAMKALVVCIELCSVNAVFA--DDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGI  243 (372)
T ss_dssp             HHHHHSTTCEEEEEEEEECGGGCCCC--SSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCTTSE
T ss_pred             HHHhcCCCccceeeeehhhcccccCC--CcchhhhhhhhhcccceeEEeccCCcccccCCceeEEecccccccCCCcccc
Confidence            99999999999999999998755322  2355667788999999999999877622222223445555566678877777


Q ss_pred             cceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHh
Q 044410          263 SGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLRE  341 (402)
Q Consensus       263 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~  341 (402)
                      .|.+...++.++.+++++..+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||++++|+..+++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~  322 (372)
T d1teda_         244 VLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQI-SDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLAR  322 (372)
T ss_dssp             EEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHH
T ss_pred             ccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCH-HHhhhhhccCccHHHHHHHHHHcCCCHHHhhhhHHHHhc
Confidence            7777777777788999999999999999999999999997 999 99999999999999999999999999988888999


Q ss_pred             cCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          342 YGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       342 ~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      ||||+|||+|++|++++++    |++.+|  +|++++++||+|++|+++|||+..
T Consensus       323 ~GN~~sasip~~L~~~l~~----g~~~~g--~d~vll~~fG~G~s~~~~ll~~~~  371 (372)
T d1teda_         323 FGNMLSVSLIFVLETMVQQ----AESAKA--ISTGVAFAFGPGVTVEGMLFDIIR  371 (372)
T ss_dssp             HCBCTHHHHHHHHHHHHHS----CSSSSS--SEEEEEEEEETTTEEEEEEEEECC
T ss_pred             cCCcHHHHHHHHHHHHHHh----CCCCCC--CCEEEEEEEcHHHhHHHHhheeec
Confidence            9999999999999999998    777665  389999999999999999999864

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=100.00  E-value=4.1e-39  Score=294.38  Aligned_cols=222  Identities=67%  Similarity=1.109  Sum_probs=193.5

Q ss_pred             ccccCCCCCcEEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccC
Q 044410           14 TTVKSNQGPTATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCY   93 (402)
Q Consensus        14 ~~~~~~~~~~~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~   93 (402)
                      ...|+.++| ++|.|+|+|+|+++++|+++.+.+..+...+......++..|+++++||++||++.+++..+..+....+
T Consensus         8 ~~~~r~~~p-a~I~giGt~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~~   86 (235)
T d1bi5a1           8 RKAQRAEGP-ATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPNVCEY   86 (235)
T ss_dssp             HHHHSCCSC-CEEEEEEEECCSCEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHTCHHHHSS
T ss_pred             hhccCCCCC-cEEEEEEEECCCcEEeHHHHHHHHHHhhccccchhhhhhhhhhhcccCCceeEEecChHhhccCcccccc
Confidence            345778899 9999999999999999999999987776665556677788999999999999999998766555555667


Q ss_pred             CCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeeccccch
Q 044410           94 EAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYTQGCYM  173 (402)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~  173 (402)
                      ..|.+++|++.+.++..+|+++|+++||+++|++++|||+||++|++++..|+.+..++++||+.....++++++++|+|
T Consensus        87 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~~~~~~C~g  166 (235)
T d1bi5a1          87 MAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFA  166 (235)
T ss_dssp             SCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTH
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEeeecCccch
Confidence            78999999999999999999999999999999999999999999999977888899999999987665446667899999


Q ss_pred             HHHHHHHHHHHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC
Q 044410          174 GGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD  236 (402)
Q Consensus       174 ~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~  236 (402)
                      +++||++|.+++++|+.++||||++|.+|..++.+++.+.++.+..++|||||+|+||+.+|.
T Consensus       167 ~~~al~~A~~~i~~~~~~~vLvV~~E~~S~~~~~~d~~~~~~~v~~~lFGDGA~A~vl~~~p~  229 (235)
T d1bi5a1         167 GGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPV  229 (235)
T ss_dssp             HHHHHHHHHHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC
T ss_pred             HHHHHHHHHHHHHcCCCCeEEEEEeeecceecCCCCCCchhhhcceeeeccceEEEEEecCCC
Confidence            999999999999999999999999999998665333334555667889999999999998876

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.7e-36  Score=270.68  Aligned_cols=197  Identities=20%  Similarity=0.331  Sum_probs=171.1

Q ss_pred             EEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHHH
Q 044410           25 TILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAM  104 (402)
Q Consensus        25 ~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (402)
                      +|.++++|+|+++++|+|+.+.+......+  +. .++..+|++++||++||++.|+|..        ...|++++|++.
T Consensus         2 ~i~~~a~~~P~~~v~n~e~~e~~~~~~~~~--~~-~~~~~~i~~~tGI~~R~~~~~~e~~--------~~~~~~~~~~~~   70 (200)
T d1u0ma1           2 TLCRPSVSVPEHVITMEETLELARRRHTDH--PQ-LPLALRLIENTGVRTRHIVQPIEDT--------LEHPGFEDRNKV   70 (200)
T ss_dssp             EECCCEEECCSEEEEHHHHHHHHHHHHTTC--TT-HHHHHHHHHHTCCCEEEESSCHHHH--------TSCCCHHHHHHH
T ss_pred             eeccceEECCCeeEcHHHHHHHHHHhCCCc--hh-HHHHHHHHHhCCCCeeeEECChhhh--------ccCCCHHHHHHH
Confidence            689999999999999999998876443221  22 2456789999999999999998853        345788999999


Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceee-ccccchHHHHHHHHHH
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIY-TQGCYMGGTVIRLAKD  183 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i-~~~C~~~~~al~~A~~  183 (402)
                      +.+.+.+|+++|+++||+++|++++|||+||+++++++..|+.+.+|+++||+.+... .+++ ++||+|++.+|++|.+
T Consensus        71 ~~~~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~-~~~i~~~gC~g~~~al~~A~~  149 (200)
T d1u0ma1          71 YEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTR-QIPIAQLGCAAGGAAINRAHD  149 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCE-EEEECSCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCee-EeccccchhhHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988889999999999999988654 5666 6899999999999999


Q ss_pred             HHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccC
Q 044410          184 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAD  234 (402)
Q Consensus       184 ~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~  234 (402)
                      ++++|+.++||||++|.+|..+ ++.+.+.++..+..+|||||+|+||+.+
T Consensus       150 ~l~~~~~~~vLvv~~e~~S~~~-~~~d~~~~~~~~~~lFgDGAaA~ll~~~  199 (200)
T d1u0ma1         150 FCTAYPEANALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAVVRGR  199 (200)
T ss_dssp             HHHHSTTCEEEEEEEEEGGGGC-CTTCCSHHHHHHHHHBCEEEEEEEEETT
T ss_pred             HHHhCCCCEEEEEEEecccccc-CCCCCChhhhhcccccccccEEEEEecC
Confidence            9999999999999999999755 4666556666678899999999999865

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-35  Score=258.03  Aligned_cols=168  Identities=24%  Similarity=0.323  Sum_probs=150.7

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      .+|.|+|+|+|+++++|+|+.+.++   .         ..+||.+++||++||+..+++                     
T Consensus         3 a~I~g~g~ylP~~~v~n~el~~~~~---~---------~~~~i~~~~Gi~~r~~~~~~~---------------------   49 (174)
T d1hnja1           3 TKIIGTGSYLPEQVRTNADLEKMVD---T---------SDEWIVTRTGIRERHIAAPNE---------------------   49 (174)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHTTSS---C---------CHHHHHHHHCCCEEEECCTTC---------------------
T ss_pred             cEEEEEEEECCCCcccHHHHHHHhC---C---------CHHHHHhccCcceeeecCCCc---------------------
Confidence            6899999999999999999987642   1         137999999999999987766                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+.+|+++||+++|++++|||+||++|+++ +..|+.+.+|+++||+++..  +++++++|+|+++||++|.
T Consensus        50 ----~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~--~~di~~~C~g~~~al~~A~  123 (174)
T d1hnja1          50 ----TVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--AFDVAAACAGFTYALSVAD  123 (174)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--EEEECCGGGHHHHHHHHHH
T ss_pred             ----cchHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchh--hhhhhhhhccHHHHHHHHH
Confidence                3889999999999999999999999999999999 78999999999999998754  8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD  236 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~  236 (402)
                      +++++|..++||||++|..|. +.++.     ++.+.++|||||+|+||++++.
T Consensus       124 ~~i~sg~~~~~Lvv~~e~~S~-~~~~~-----d~~~~~lfGDgA~A~vl~~~~~  171 (174)
T d1hnja1         124 QYVKSGAVKYALVVGSDVLAR-TCDPT-----DRGTIIIFGDGAGAAVLAASEE  171 (174)
T ss_dssp             HHHHTTSCSEEEEEEEECHHH-HSCTT-----CHHHHTTBCCEEEEEEEEEESS
T ss_pred             HHHhcCCcceeEEEeeehhhc-ccCCC-----CCCeEEEeceeeEEEEEEeCCC
Confidence            999999999999999999996 33443     3446789999999999998775

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=100.00  E-value=1.4e-34  Score=254.22  Aligned_cols=168  Identities=22%  Similarity=0.305  Sum_probs=150.2

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      .+|+|+|+|+|+++++|+|+.+.++    .+        .+||.+++||++||++.++|                     
T Consensus        10 arI~g~g~ylP~~~v~n~e~~~~~~----~~--------~~~i~~~tGi~~R~~~~~~e---------------------   56 (181)
T d1mzja1          10 SRVLGVGSYRPRREVSNKEVCTWID----ST--------EEWIETRTGIRSRRIAEPDE---------------------   56 (181)
T ss_dssp             EEEEEEEEECCSCEEEHHHHTTTSS----CC--------HHHHHHHHCCSEEECCCTTC---------------------
T ss_pred             cEEEEEEEECCCceecHHHHHHHcC----CC--------HHHHHhccCcceehhhccCC---------------------
Confidence            7999999999999999999987642    11        37999999999999998776                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          +..+|+++|+++||+++|++++|||+||++|+++ +..|+.+..||++||.++..  ++|++++|+|+++||++|.
T Consensus        57 ----~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~~~--~~Dv~~~C~g~~~aL~~A~  130 (181)
T d1mzja1          57 ----TIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG--GFDLSAACAGFCHALSIAA  130 (181)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHHH
T ss_pred             ----cHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCCcc--ceeHHhhhccHHHHHHHHh
Confidence                3899999999999999999999999999999999 78999999999999988754  8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD  236 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~  236 (402)
                      +++++++.++||||++|.+|. +.++++     +.+..+|||||+|+||++++.
T Consensus       131 ~~i~~~~~~~~LvV~~e~~s~-~~~~~d-----~~~~~lfGDGAaA~ll~~~~~  178 (181)
T d1mzja1         131 DAVESGGSRHVLVVATERMTD-VIDLAD-----RSLSFLFGDGAGAAVVGPSDV  178 (181)
T ss_dssp             HHHHHSSCSCEEEEEEEEGGG-GSCSSC-----TTTTTTBCEEEEEEEEEEESS
T ss_pred             CHhhcCCCceeEEeeeccccc-cCCCCC-----cceEEEeeeeeEEEEEEeCCC
Confidence            999999999999999999996 435543     335789999999999998765

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-34  Score=250.63  Aligned_cols=166  Identities=21%  Similarity=0.291  Sum_probs=148.2

Q ss_pred             EEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHHH
Q 044410           25 TILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQAM  104 (402)
Q Consensus        25 ~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (402)
                      +|.|+|+|+|+++++|+++.+.++    .+        .+||.+++||++||++.+++                      
T Consensus         2 gI~~ig~ylP~~~v~n~~~~~~~~----~~--------~~~i~~~~Gi~~R~~~~~~e----------------------   47 (172)
T d1ub7a1           2 GILALGAYVPERVMTNADFEAYLD----TS--------DEWIVTRTGIKERRVAAEDE----------------------   47 (172)
T ss_dssp             EEEEEEEECCSEEEEHHHHHTTSS----CC--------HHHHHHHTCCCEEEECCTTC----------------------
T ss_pred             ceeEEEEECCCceEcHHHHHHHhC----CC--------HHHHHhccCceeeeeccccc----------------------
Confidence            799999999999999999987531    11        37899999999999998876                      


Q ss_pred             HHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 044410          105 LIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKD  183 (402)
Q Consensus       105 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~  183 (402)
                         +..+|+.+|+++||+++|++++|||+||++|+++ +..|+.+.+|+++||.+ ..  ++|++++|+|++.||++|..
T Consensus        48 ---~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~-~~--~~di~~~C~g~~~al~~a~~  121 (172)
T d1ub7a1          48 ---YTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK-AF--AYDLLAGCPGWIYALAQAHA  121 (172)
T ss_dssp             ---CHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCC-CE--EEEEECSTTHHHHHHHHHHH
T ss_pred             ---cccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccC-cc--ceeehhccccHHHHHHHHhh
Confidence               3889999999999999999999999999999999 78999999999999954 43  89999999999999999999


Q ss_pred             HHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCCC
Q 044410          184 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADSD  236 (402)
Q Consensus       184 ~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~~  236 (402)
                      ++++|..++||||++|.+|. +.++++     +.+..+|||||+|+||++.+.
T Consensus       122 ~~~~~~~~~~Lvv~~e~~S~-~~~~~d-----~~~~~lfGDgAaA~ll~~~~~  168 (172)
T d1ub7a1         122 LVEAGLAQKVLAVGAEALSK-IIDWND-----RATAVLFGDGGGAAVVGKVRE  168 (172)
T ss_dssp             HHHTTSCSEEEEEEEECGGG-TSCTTC-----HHHHTTBCCEEEEEEEECCCT
T ss_pred             hhhcCCcceeEEeccccccc-ccCCCC-----cCeEEEecceeEEEEEEEcCC
Confidence            99999999999999999997 435543     446789999999999998876

>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Pyrone synthase (PyS, chalcone synthase 2)
species: Gerbera hybrid cultivar [TaxId: 18101]

Probab=99.97  E-value=2.3e-30  Score=221.06  Aligned_cols=156  Identities=54%  Similarity=0.919  Sum_probs=142.6

Q ss_pred             CCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHH
Q 044410          241 ESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLD  319 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~  319 (402)
                      +.|.|++++..+.++|++++.+.|.+.+.|+.+.++++||.++.++++++++++|+++|++. +|| +|++||+|++|++
T Consensus         3 E~Plfei~~~~~~~iP~s~~~~~~~v~~~G~~~~l~r~Vp~~~~~~v~~~v~~~l~~~gl~~-~di~~~v~Hqgg~~Ild   81 (160)
T d1ee0a2           3 ERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITD-WNSVFWMVHPGGRAILD   81 (160)
T ss_dssp             CCCCEEEEEEEEEECTTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSSHHHHH
T ss_pred             ccchhhhcccCCeEECCCccccCeeecCCceEEeeCchhHHHHHHHHHHHHHHHHhhccCCc-cccceEeecCCcHHHHH
Confidence            34689999999999999999999999999999999999999999999999999999999997 999 9999999999999


Q ss_pred             HHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410          320 QVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       320 ~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                      .++++||++++++..||+++++||||+|||+|++|++++++...++..+.|.+.|+++++|||+|+||++++||...+
T Consensus        82 ~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~~~~~g~~~d~~ll~afG~Glt~~~~llr~~~~  159 (160)
T d1ee0a2          82 QVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRV  159 (160)
T ss_dssp             HHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECBC
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHhhhhhcCCCCcCCCcCEEEEEEEChHHHHHHHHHeeccC
Confidence            999999999999999999999999999999999999999864433555555555899999999999999999998764

>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=99.97  E-value=3.6e-30  Score=218.68  Aligned_cols=151  Identities=54%  Similarity=0.881  Sum_probs=139.9

Q ss_pred             eEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHH
Q 044410          245 FQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEK  323 (402)
Q Consensus       245 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~  323 (402)
                      |++++..+.++|++++.+.|++++.|+.+.++++||.++.++++++++++|+++|++. +|+ +|++||+|++|++.+++
T Consensus         2 fei~~~~~~~iP~t~~~m~~~v~d~G~~~~l~r~Vp~~i~~~i~~~~~~~l~~~gl~~-~di~~~v~Hqgg~~Ild~v~~   80 (154)
T d1bi5a2           2 FEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISD-YNSIFWIAHPGGPAILDQVEQ   80 (154)
T ss_dssp             EEEEEEEEEECTTCTTSEECCEETTEECCEECSCHHHHHHHHHHHHHHHHHGGGTCCC-TTSSEEEECCSSHHHHHHHHH
T ss_pred             EEEEeCCCeEeCCCcccccccccCCcEEeecccchHHHHHHHHHHHHHHHHHHcCCCc-cccceEeeccccHHHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999997 888 99999999999999999


Q ss_pred             HcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          324 TLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       324 ~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      +||++++|+..||+++++||||+|||+|+.|++++++....|..+.|.+.|++++++||+|+||++++||+..
T Consensus        81 ~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~~~~~g~~~~~~~~~aFG~Glt~~~~llr~~~  153 (154)
T d1bi5a2          81 KLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA  153 (154)
T ss_dssp             HHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             HhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHHhhhccCCcccCCCcCEEEEEEEchHHhHHHHHHhcCc
Confidence            9999999999999999999999999999999999886444455666655589999999999999999999865

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.97  E-value=3.2e-31  Score=229.55  Aligned_cols=163  Identities=21%  Similarity=0.274  Sum_probs=143.3

Q ss_pred             EEEEeeeeeCCCcccCcCcHHHHHHhhcCCCChhHHHHHHHHHHHHcCcceeecccchhHhhhCCCCccCCCCChHHHHH
Q 044410           24 ATILAIGTSTPPNCFYQADYPDFYFRVTNSDHKTELKEKFKRICERQSIKKRYFHLTEEILKENPNMCCYEAPSLDARQA  103 (402)
Q Consensus        24 ~~I~gig~~lP~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (402)
                      |+|.++|.|+|+++++|+|+++..+    .+        .+|+.+++||++||++.++|                     
T Consensus         2 VgI~~~~~ylP~~~v~~~e~~~~~g----~~--------~~~i~~~~Gi~~r~~~~~~E---------------------   48 (166)
T d1xpma1           2 IGIDKINFYVPKYYVDMAKLAEARQ----VD--------PNKFLIGIGQTEMAVSPVNQ---------------------   48 (166)
T ss_dssp             EEEEEEEEECCSEEEEHHHHHHHTT----SC--------HHHHHTTTCCSEEEECCTTC---------------------
T ss_pred             eeEeEEEEECCCeEEcHHHHHHHhC----CC--------HHHHHHhcCcEEEEeCCCcc---------------------
Confidence            7999999999999999999987642    11        37899999999999998877                     


Q ss_pred             HHHhhHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          104 MLIDEVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       104 ~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                          ++.+|+++|++++|++.+  +++||+||++++++ +..|..+..++++||+++... +++++++|+|+++||++|.
T Consensus        49 ----~~~~ma~~Aa~~al~~~~--~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~-~~dv~~~C~g~~~al~~A~  121 (166)
T d1xpma1          49 ----DIVSMGANAAKDIITDED--KKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFAR-CFEMKEACYAATPAIQLAK  121 (166)
T ss_dssp             ----CHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESTTTTHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHhhhcccc--CCCCCeEEEeccccccccchhHHHHHHhhccccceE-EeeecccHHHHHHHHHHHh
Confidence                389999999999998875  77999999999999 789999999999999987654 8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCccccCCCCccchhhhhhhhhhccCcEEEEEccCC
Q 044410          183 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~~~~~~~~~~~~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                      +++++++.+++|||++|..+..+. ..        ...+|||||+|+||+++|
T Consensus       122 ~~i~~~~~~~alvV~sd~~~~~~~-~~--------~~~~fGDGA~A~ll~~~P  165 (166)
T d1xpma1         122 DYLATRPNEKVLVIATDTARYGLN-SG--------GEPTQGAGAVAMVIAHNP  165 (166)
T ss_dssp             HHHTTCTTCEEEEEEEEEECCCTT-CS--------SGGGCEEEEEEEEEEESC
T ss_pred             hHHhcCCCCeEEEEEEceEeccCC-CC--------CCccCCCeeEEEEEecCC
Confidence            999999999999999998875332 11        135799999999999986

>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Dihydropinosylvin synthase
species: Scots pine (Pinus sylvestris) [TaxId: 3349]

Probab=99.97  E-value=7.8e-30  Score=217.34  Aligned_cols=153  Identities=50%  Similarity=0.807  Sum_probs=141.0

Q ss_pred             ceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHH
Q 044410          244 LFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVE  322 (402)
Q Consensus       244 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~  322 (402)
                      .|+++...+.++|++++.+.|.+.+.|+.+.++++||.++.++++++++++|++++++. +++ +|++||+|.+|++.++
T Consensus         2 ~feiv~~~~~~iP~t~~~~~~~~~~~G~~~~l~~~Vp~~v~~~i~~~~~~~l~~~~~~~-~did~~i~Hqgg~~Ild~v~   80 (156)
T d1u0ua2           2 CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISD-WNKLFWVVHPGGRAILDRVE   80 (156)
T ss_dssp             CEEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSCHHHHHHHH
T ss_pred             eEEEEeCCCeEeCCCccccceeeecCcEEEEEcchhHHHHHHHHHHHHHHHHHHcCCCh-hhCceEeecCCcHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999999997 999 9999999999999999


Q ss_pred             HHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeecc
Q 044410          323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVST  397 (402)
Q Consensus       323 ~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~  397 (402)
                      ++||++++|+..||+++++||||+|||+|+.|+++.++...+++.+.|.++|+++++|||+|+||+++|||...+
T Consensus        81 ~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~~~~~~~~~~~~~~~~~~~~~gfG~Glt~~~~llr~~~~  155 (156)
T d1u0ua2          81 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI  155 (156)
T ss_dssp             HHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHHTCSBSBTTBSEEEEEEEETTTEEEEEEEEECBC
T ss_pred             HHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHHhhhhccCCCcCCCCCEEEEEEECHHHhHHHHHHeeCcc
Confidence            999999999999999999999999999999999998764444555555556999999999999999999998654

>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.96  E-value=9.5e-29  Score=209.11  Aligned_cols=144  Identities=28%  Similarity=0.429  Sum_probs=135.3

Q ss_pred             ceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHH
Q 044410          244 LFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVE  322 (402)
Q Consensus       244 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~  322 (402)
                      .+++...++.++|++++.+.|.+++.|+.+.+.+.++..+ +.+.++++++|+++|+++ +|| +|++||+|+++++.++
T Consensus         3 ~~~l~~~~~~~~P~t~~~~~~~~~~~g~~~~l~~~~p~~i-~~~~~~i~~~l~~~g~~~-~did~~~~Hq~~~~i~~~i~   80 (148)
T d1u0ma2           3 GVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM-EPLAPALKELAGEHGWDA-SDLDFYIVHAGGPRILDDLS   80 (148)
T ss_dssp             EEEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGH-HHHHHHHHHHHHTTSCCS-SCCSCCEEECSHHHHHHHHH
T ss_pred             ceEEEecCCEEccCChhhcceEeecCeEEEEEecccchHH-HHHHHHHHHHHHHhCCCH-HHCCEEEECCCCHHHHHHHH
Confidence            5788888899999999999999999999999999888755 568899999999999997 999 9999999999999999


Q ss_pred             HHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          323 KTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       323 ~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      ++||++++|+..+++++++|||++|||+|++|++++++    |++++|   |+|+++|||+|++|+++++||..
T Consensus        81 ~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~~~----~~~~~G---d~ill~gfG~G~s~~~~llrW~~  147 (148)
T d1u0ma2          81 TFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQT  147 (148)
T ss_dssp             HHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEEC
T ss_pred             HHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHHHc----CCCCCC---CEEEEEEEchHhEeeEEEEEEcc
Confidence            99999999999888899999999999999999999998    899999   99999999999999999999974

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=99.93  E-value=6e-27  Score=199.04  Aligned_cols=116  Identities=20%  Similarity=0.252  Sum_probs=109.2

Q ss_pred             EEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchH
Q 044410          273 CHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSV  350 (402)
Q Consensus       273 ~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi  350 (402)
                      ++| |++||+++++.++++++++|+++|++. +|| +|++||+|+++++.++++||+|++|+...  ++++||||+|||+
T Consensus        35 ~~m~G~~v~~~av~~vp~~i~~~L~~~gl~~-~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~--~~~~~GNt~Sasi  111 (153)
T d1mzja2          35 LVMDGKRVFRWAVADVVPAAREALEVAGLTV-GDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR--DAEDTGNTSSASV  111 (153)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHHHTTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC--THHHHCBCTTHHH
T ss_pred             EEEcCHHHHHHHHHHHHHHHHHHHHHhCCCc-ccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh--hhhhcCCcccchH
Confidence            444 789999999999999999999999997 999 99999999999999999999999997542  4899999999999


Q ss_pred             HHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeeccC
Q 044410          351 FFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVSTN  398 (402)
Q Consensus       351 ~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~~~  398 (402)
                      |++|++++++    +++++|   |+|++++||+|++|++++|+|.+.|
T Consensus       112 p~~L~~~~~~----~~~~~G---d~ill~~fG~G~s~~~~~l~~~~~~  152 (153)
T d1mzja2         112 ALALDRLVRS----GAVPGG---GPALMIGFGAGLSYAGQALLLPDPP  152 (153)
T ss_dssp             HHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCCC
T ss_pred             HHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhhEEEEEecCCC
Confidence            9999999998    999999   9999999999999999999999988

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.4e-26  Score=194.79  Aligned_cols=108  Identities=20%  Similarity=0.306  Sum_probs=104.9

Q ss_pred             CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHH
Q 044410          276 SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFIL  354 (402)
Q Consensus       276 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L  354 (402)
                      |+++|+++++.++++++++|+++|+++ +|| +|++||+|+++++.++++||++++|++.+   +++||||+|||+|++|
T Consensus        35 G~~vf~~av~~~~~~i~~~L~~~g~~~-~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~---~~~~GN~~sasip~~L  110 (143)
T d1hnja2          35 GNEVFKVAVTELAHIVDETLAANNLDR-SQLDWLVPHQANLRIISATAKKLGMSMDNVVVT---LDRHGNTSAASVPCAL  110 (143)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC---HHHHCBCGGGHHHHHH
T ss_pred             ChHHhhhhhhhhhHHHHHHHHHhhhcc-cccceEEeccCchHHHHHHHHhCccchhhhhhh---hhhhcccccchHHHHH
Confidence            789999999999999999999999997 999 99999999999999999999999999875   9999999999999999


Q ss_pred             HHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          355 DEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       355 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      ++++++    |++++|   |+|++++||+|++|+++++||
T Consensus       111 ~~~~~~----~~~~~G---d~vll~g~G~G~s~g~~llrw  143 (143)
T d1hnja2         111 DEAVRD----GRIKPG---QLVLLEAFGGGFTWGSALVRF  143 (143)
T ss_dssp             HHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred             HHHHHh----CCCCCC---CEEEEEEEehhhhhEEEEEEC
Confidence            999998    999999   999999999999999999998

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=3.2e-26  Score=193.94  Aligned_cols=110  Identities=24%  Similarity=0.369  Sum_probs=106.7

Q ss_pred             CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHH
Q 044410          276 SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFIL  354 (402)
Q Consensus       276 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L  354 (402)
                      |++||+++.+.++++|+++|+++|+++ +|| +|++||+|.++++.++++|++++++++.+   +++||||+|||+|++|
T Consensus        38 G~~vf~~a~~~vp~~i~~~L~~~g~~~-~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~---~~~~Gn~~sasip~~L  113 (149)
T d1ub7a2          38 GREVFKFAVRVMNTATLEAIEKAGLTP-EDIRLFVPHQANLRIIDAARERLGLPWERVAVN---VDRYGNTSTASIPLAL  113 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC---HHHHCBCGGGHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcccc-ccccEEEeeccchHHHHHHHhhccchhhHHHHH---HHHhcCCcchhHHHHH
Confidence            789999999999999999999999997 999 99999999999999999999999999875   9999999999999999


Q ss_pred             HHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          355 DEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       355 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      ++++++    +++++|   |+|++++||+|++|+++|+||.+
T Consensus       114 ~~~~~~----~~~~~G---d~vll~g~G~G~s~ga~llrw~g  148 (149)
T d1ub7a2         114 KEAVDA----GRIREG---DHVLLVSFGAGLTWAAAVLTWGG  148 (149)
T ss_dssp             HHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred             HHHHHc----CCCCCC---CEEEEEEEchHhhhEEEEEEECC
Confidence            999998    999999   99999999999999999999976

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.92  E-value=3.4e-26  Score=193.24  Aligned_cols=112  Identities=22%  Similarity=0.336  Sum_probs=105.9

Q ss_pred             EEe-CCchhHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchH
Q 044410          273 CHL-SRDVPVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSV  350 (402)
Q Consensus       273 ~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi  350 (402)
                      ++| |++||+++.+.++++|+++|+++|+++ +|| +|++||+|+++++.++++||++++|+..+  ++++||||+|||+
T Consensus        35 ~~m~G~~Vf~~a~~~v~~~i~~~L~~~gl~~-~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~--~~~~~GNt~sasi  111 (148)
T d1u6ea2          35 VRLEGPAVFRWAAFKMGDVGRRAMDAAGVRP-DQIDVFVPHQANSRINELLVKNLQLRPDAVVAN--DIEHTGNTSAASI  111 (148)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCCEEEECCSCHHHHHHHHHHHTCCTTCEECC--THHHHCBCGGGHH
T ss_pred             EEeecHHHHHHHHHHHHHHHHHHHHHcCCCc-ccccEEEeccccHHHHHHHHHhcCCCchhhhhh--hHHhhCCCccchH
Confidence            444 799999999999999999999999997 999 99999999999999999999999998764  5999999999999


Q ss_pred             HHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEee
Q 044410          351 FFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       351 ~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      |++|++++++    |++++|   |++++++||+|++|+++|+|+
T Consensus       112 p~~L~~a~~~----g~i~~G---d~vll~gfG~G~s~~a~llrv  148 (148)
T d1u6ea2         112 PLAMAELLTT----GAAKPG---DLALLIGYGAGLSYAAQVVRM  148 (148)
T ss_dssp             HHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred             HHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheEEEEeC
Confidence            9999999998    999999   999999999999999999984

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=99.14  E-value=6.4e-11  Score=107.30  Aligned_cols=123  Identities=16%  Similarity=0.181  Sum_probs=93.9

Q ss_pred             HhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC-C--------------------------CCCCHHHHHHHH
Q 044410          106 IDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG-V--------------------------DMPGADVRLMRL  154 (402)
Q Consensus       106 ~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~-~--------------------------~~p~~a~~i~~~  154 (402)
                      .+....|+..|+++||+++|+++++++    .|+++++.+ .                          .....+.+|+..
T Consensus        68 ~d~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~  147 (249)
T d1j3na1          68 LDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMR  147 (249)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhh
Confidence            345678999999999999999877654    566666422 0                          112457799999


Q ss_pred             cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------cC----------CCCccch
Q 044410          155 LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------FH----------EPSETHL  213 (402)
Q Consensus       155 LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~~----------~~~~~~~  213 (402)
                      +|+...   .+.+..+|++++.||.+|..+|++|..+.+||.++|.....           +.          .|.|.++
T Consensus       148 ~gl~Gp---~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~  224 (249)
T d1j3na1         148 YGFTGP---SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSR  224 (249)
T ss_dssp             HTCCSC---BCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTC
T ss_pred             cCCCCC---ccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCC
Confidence            999975   67899999999999999999999999999999999975310           10          1233222


Q ss_pred             hhhhhhhhhccCcEEEEEccCC
Q 044410          214 DVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       214 ~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                          ..+++|+||+++||++.+
T Consensus       225 ----dG~v~gEGa~~lvLe~~~  242 (249)
T d1j3na1         225 ----DGFVMGEGAGVLVLEAYE  242 (249)
T ss_dssp             ----CCBCBBCEEEEEEEEEHH
T ss_pred             ----CCEeeEeEEEEEEEccHH
Confidence                367899999999998754

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=99.12  E-value=1.4e-10  Score=106.35  Aligned_cols=95  Identities=13%  Similarity=0.014  Sum_probs=86.8

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i  185 (402)
                      ++.+|+..|++.+|+++|+++++||.||++++.+  ......+.+++-..|++..+. ++.++..|+|++.|+..|.+.|
T Consensus        23 ~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp-~~tVn~~CaSg~~Ai~~a~~~I  101 (273)
T d1ulqa1          23 RPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA-GCTVNRLCGSGLEAVAQAARAI  101 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE-EEEEECGGGHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccc-eEEEecccchHHHHHHHHHHHH
Confidence            4889999999999999999999999999998877  245678889999999987653 8999999999999999999999


Q ss_pred             HcCCCCeEEEEEeccCcc
Q 044410          186 ENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       186 ~~g~~~~vLvv~~e~~s~  203 (402)
                      ++|..+.+|+++.|.+|.
T Consensus       102 ~~G~~d~~lagG~EsmS~  119 (273)
T d1ulqa1         102 WAGEGKVYIGSGVESMSR  119 (273)
T ss_dssp             HTTSCSEEEEEEEEESSS
T ss_pred             hcCCCccceeeeccccch
Confidence            999999999999999995

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=99.09  E-value=2.1e-10  Score=104.70  Aligned_cols=95  Identities=8%  Similarity=0.051  Sum_probs=87.9

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAE  186 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~  186 (402)
                      ++.+|+..+++.+|+++|+++++||.|++++..+ ...+.++.+++-..|++..+. ++.++..|+|++.|+.+|.+.|+
T Consensus        26 ~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vp-a~tv~~~C~Sg~~Ai~~Aa~~I~  104 (268)
T d1m3ka1          26 PAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT-AWGMNQLAGSGLRAVALGMQQIA  104 (268)
T ss_dssp             CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE-EEEEECGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCccccc-ceeecccCcccchHHHHHHHHHh
Confidence            4889999999999999999999999999999887 556788999999999997653 88999999999999999999999


Q ss_pred             cCCCCeEEEEEeccCcc
Q 044410          187 NNPGARVLVVCSDIRVL  203 (402)
Q Consensus       187 ~g~~~~vLvv~~e~~s~  203 (402)
                      +|..+.+|+++.|.+|.
T Consensus       105 ~G~~dvvlagG~EsmS~  121 (268)
T d1m3ka1         105 TGDASIIVAGGMESMSM  121 (268)
T ss_dssp             TTSCSCEEEEEEEESTT
T ss_pred             CCCceEEeecccccccc
Confidence            99999999999999995

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=98.99  E-value=6.7e-10  Score=100.96  Aligned_cols=95  Identities=6%  Similarity=-0.023  Sum_probs=86.5

Q ss_pred             hHHHHHHHHHHHHHHH-cCCCCCCccEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKE-WGQPVSKITHLIFSAFYG--VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~-ag~~~~dId~li~~s~~~--~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~  184 (402)
                      ++.+|+..+++++|++ +|+++++||.||+++..+  ...+..+..++-..|++..+. ++.++..|+|++.|+.+|...
T Consensus        29 ~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p~~vp-~~tV~~~C~Sgl~Ai~~aa~~  107 (262)
T d1wdkc1          29 RAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSA-AQTVSRLCGSSMSALHTAAQA  107 (262)
T ss_dssp             CHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSE-EEEEECGGGHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcccccc-hhhccccccHHHHHHHHHHHH
Confidence            3789999999999996 899999999999999877  356788888888889987654 899999999999999999999


Q ss_pred             HHcCCCCeEEEEEeccCcc
Q 044410          185 AENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       185 i~~g~~~~vLvv~~e~~s~  203 (402)
                      |.+|..+.+|+++.|.+|.
T Consensus       108 I~sG~~dvvlAgGvEsmS~  126 (262)
T d1wdkc1         108 IMTGNGDVFVVGGVEHMGH  126 (262)
T ss_dssp             HHTTSCSEEEEEEEEETTT
T ss_pred             HHhhcCCceeeeccccccc
Confidence            9999999999999999995

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=98.94  E-value=2.2e-09  Score=96.99  Aligned_cols=123  Identities=16%  Similarity=0.182  Sum_probs=93.0

Q ss_pred             HhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC----------------------C----CCC-CHHHHHHHH
Q 044410          106 IDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG----------------------V----DMP-GADVRLMRL  154 (402)
Q Consensus       106 ~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~----------------------~----~~p-~~a~~i~~~  154 (402)
                      .+....|+..|+++||+++|+++++.+    .++++++..                      .    .++ ..+.+|+..
T Consensus        69 ~d~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~  148 (250)
T d2gfva1          69 MDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIM  148 (250)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHH
Confidence            345678999999999999999877654    355555421                      0    112 347789999


Q ss_pred             cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcc-----------cc----------CCCCccch
Q 044410          155 LGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL-----------DF----------HEPSETHL  213 (402)
Q Consensus       155 LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~-----------~~----------~~~~~~~~  213 (402)
                      ||++..   .+.+..+|++++.||..|.++|++|..+.+||+++|....           .+          ..|.|.++
T Consensus       149 ~gl~Gp---~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~r  225 (250)
T d2gfva1         149 YGLRGP---SISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKER  225 (250)
T ss_dssp             TTCCSC---EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTC
T ss_pred             hCCCCC---ccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCC
Confidence            999985   6789999999999999999999999999999999996421           01          02333322


Q ss_pred             hhhhhhhhhccCcEEEEEccCC
Q 044410          214 DVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       214 ~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                          ..+++|+||+++||++.+
T Consensus       226 ----dG~v~gEGaa~lVLE~~~  243 (250)
T d2gfva1         226 ----DGFVLGDGAGMLVLEEYE  243 (250)
T ss_dssp             ----CSBCBBCEEEEEEEEEHH
T ss_pred             ----CCEeeeeEEEEEEECcHH
Confidence                367999999999998643

>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.81  E-value=9.8e-09  Score=90.25  Aligned_cols=109  Identities=16%  Similarity=0.057  Sum_probs=85.3

Q ss_pred             hHHHHHhHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHH---------HHHHHhcCCCCcch
Q 044410          280 PVAIGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWAS---------RYVLREYGNMGAPS  349 (402)
Q Consensus       280 ~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~---------~~~l~~~Gn~~sas  349 (402)
                      -....+.+..+++...++.|.+. +|+ ++++|++..+|.+...+.|....++....         ...-++.||+++||
T Consensus        35 ~~~Yl~~l~~~~~~~~~~~g~~~-~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~YTaS  113 (221)
T d1xpma2          35 KDAYIRSFQQSWNEYAKRQGKSL-ADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGS  113 (221)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCh-hhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCcchHH
Confidence            34567788889999999999997 999 99999999999998888775432221111         00113689999999


Q ss_pred             HHHHHHHHHHhhhhhhcccCCCCCceEEEEEEcccccceeeEEeeec
Q 044410          350 VFFILDEVRKKSIEEMKATTGEGLECGVLFGFGPGLTVETVVLQSVS  396 (402)
Q Consensus       350 i~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~~~~ll~~~~  396 (402)
                      ++++|..+++.    +.+.+|   ++|+|+|+|+|......-+++.+
T Consensus       114 lyl~L~Sll~~----~~~~~G---~rIglfSYGSG~~ae~fs~~V~~  153 (221)
T d1xpma2         114 LYLSLISLLEN----RDLQAG---ETIGLFSYGSGSVGEFYSATLVE  153 (221)
T ss_dssp             HHHHHHHHHHH----SCCCTT---CEEEEEEEETTTEEEEEEEEECT
T ss_pred             HHHHHHhhhcc----ccCCCC---CEEEEEEecCCcceeEEEEEEcc
Confidence            99999999987    667789   99999999999988777776643

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.80  E-value=4.2e-09  Score=95.93  Aligned_cols=95  Identities=9%  Similarity=-0.029  Sum_probs=83.5

Q ss_pred             hHHHHHHHHHHHHHHHc----CCCCCCccEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEW----GQPVSKITHLIFSAFYG-VDMPGADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAK  182 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~a----g~~~~dId~li~~s~~~-~~~p~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~  182 (402)
                      ++.+|+..+++.+|+++    +++|++||.||+++..+ -.....+.+++-..|++..+. ++.++..|+|++.|+..|.
T Consensus        34 ~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~aglp~~vp-a~tVnr~CaSg~~Ai~~Aa  112 (269)
T d1afwa1          34 NTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTP-FVALNRQCSSGLTAVNDIA  112 (269)
T ss_dssp             CHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC-EEEEECGGGHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhcccccccc-chhccccchHHHHHHHHHH
Confidence            37899999999999865    69999999999998876 333467788888899987654 8999999999999999999


Q ss_pred             HHHHcCCCCeEEEEEeccCcc
Q 044410          183 DIAENNPGARVLVVCSDIRVL  203 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~~e~~s~  203 (402)
                      +.|.+|..+.+|+++.|.+|.
T Consensus       113 ~~I~~G~~divlagG~EsmS~  133 (269)
T d1afwa1         113 NKIKVGQIDIGLALGVESMTN  133 (269)
T ss_dssp             HHHHTTSCSEEEEEEEEEHHH
T ss_pred             HHHhhccccceeeeecccccc
Confidence            999999999999999999984

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=98.76  E-value=1.4e-08  Score=91.34  Aligned_cols=128  Identities=16%  Similarity=0.150  Sum_probs=94.4

Q ss_pred             HHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC------------------CC--------CC-CHHH
Q 044410          101 RQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG------------------VD--------MP-GADV  149 (402)
Q Consensus       101 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~------------------~~--------~p-~~a~  149 (402)
                      +...+.+....|+..++.+||+++|+++..+.    .++++++..                  ..        .+ ..+.
T Consensus        64 ~~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  143 (250)
T d1e5ma1          64 KEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASG  143 (250)
T ss_dssp             HHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHH
T ss_pred             hhhhhcCcHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhh
Confidence            33344456778999999999999999876542    456655421                  01        11 2577


Q ss_pred             HHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC-cc---------ccC-----------CC
Q 044410          150 RLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VL---------DFH-----------EP  208 (402)
Q Consensus       150 ~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~---------~~~-----------~~  208 (402)
                      +++..+|+...   .+.+..+|++++.||.+|.++|++|..+.+||.++|.. +.         ...           .|
T Consensus       144 ~is~~~gl~Gp---~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rP  220 (250)
T d1e5ma1         144 LTAINLGAKGP---NNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRP  220 (250)
T ss_dssp             HHHHHHTCCSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCT
T ss_pred             hHHHhccCCCC---CccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCC
Confidence            89999999985   67899999999999999999999999999999999964 21         010           13


Q ss_pred             CccchhhhhhhhhhccCcEEEEEccCC
Q 044410          209 SETHLDVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       209 ~~~~~~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                      .|.++    ..++.|+||+++||++.+
T Consensus       221 FD~~~----dG~~~gEGa~~~vLe~l~  243 (250)
T d1e5ma1         221 FDKDR----DGFVMGEGSGILILEELE  243 (250)
T ss_dssp             TBTTC----CSBCBBCEEEEEEEEEHH
T ss_pred             CCCCC----CCEeeEeeEEEEEEeeHH
Confidence            33222    367899999999998743

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.65  E-value=3.3e-08  Score=86.79  Aligned_cols=100  Identities=13%  Similarity=0.178  Sum_probs=78.5

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC----------------------------CC----
Q 044410          100 ARQAMLIDEVPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG----------------------------VD----  143 (402)
Q Consensus       100 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~----------------------------~~----  143 (402)
                      .+..+..+....|+..|+++||+++|+++++++    .++++++..                            +.    
T Consensus        62 ~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (216)
T d1tqya1          62 PRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYL  141 (216)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHH
T ss_pred             hhhhcccCcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhccccccccc
Confidence            344455566789999999999999999986654    244443321                            00    


Q ss_pred             CC-CHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCc
Q 044410          144 MP-GADVRLMRLLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV  202 (402)
Q Consensus       144 ~p-~~a~~i~~~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s  202 (402)
                      +| ..+.+++..+|+...   .+.+..+|++++.||..|..+|++|.++.+||.++|...
T Consensus       142 ~~~~~a~~ia~~~g~~Gp---~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l  198 (216)
T d1tqya1         142 VPSVMPAEVAWAVGAEGP---VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPI  198 (216)
T ss_dssp             STTHHHHHHHHHHTCCSC---EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             CchHHHHHHHHhcCcccc---ceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            12 246889999999975   688999999999999999999999999999999999753

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=98.43  E-value=1.5e-07  Score=84.47  Aligned_cols=120  Identities=13%  Similarity=0.101  Sum_probs=87.4

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCC------CccEEEEEecCC-----------------------C-----CCCCHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVS------KITHLIFSAFYG-----------------------V-----DMPGADVRLMR  153 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~------dId~li~~s~~~-----------------------~-----~~p~~a~~i~~  153 (402)
                      ....+...++.++++++++..+      .+ .++.++...                       +     ..-..+.+|..
T Consensus        70 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~-g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~  148 (253)
T d2vbaa1          70 DASIYAFLSMEQAIADAGLSPEAYQNNPRV-GLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLAT  148 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCHHHHTTCTTE-EEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHT
T ss_pred             hhhhhhhHHHHHHHHHhhccchhccCCCCE-EEEeccccccccccccccccccccCCccccCchhhhccccccccceecc
Confidence            4566888899999999997642      23 344444321                       0     11235678999


Q ss_pred             HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCcc----------cc-----------CCCCccc
Q 044410          154 LLGLKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DF-----------HEPSETH  212 (402)
Q Consensus       154 ~LGl~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~----------~~-----------~~~~~~~  212 (402)
                      .+|+...   .+.+..+|++++.||..|.++|++|..+.+||.++|....          .+           ..|.|.+
T Consensus       149 ~~g~~Gp---~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~~  225 (253)
T d2vbaa1         149 PFKIHGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAH  225 (253)
T ss_dssp             TTTCCSC---EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTT
T ss_pred             ccCcccc---eeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcchhhhHHHHHHHhcCCCCCCCCCCCCCCCC
Confidence            9999985   6789999999999999999999999999999999986531          00           0123322


Q ss_pred             hhhhhhhhhhccCcEEEEEccCC
Q 044410          213 LDVLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       213 ~~~~~~~~lfGDGAaA~vL~~~~  235 (402)
                      +    ..+++|+||+++||++.+
T Consensus       226 ~----~G~v~gEGa~~lvLe~le  244 (253)
T d2vbaa1         226 R----DGFVIAGGGGMVVVEELE  244 (253)
T ss_dssp             C----CSBCBBCEEEEEEEEEHH
T ss_pred             C----CCEeeeeEEEEEEEccHH
Confidence            2    367999999999998754

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=98.37  E-value=1.1e-06  Score=79.06  Aligned_cols=120  Identities=13%  Similarity=0.094  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCC-----ccEEEEEecCC------------------CC--------C-CCHHHHHHHHcC
Q 044410          109 VPKLGKEAALKAIKEWGQPVSK-----ITHLIFSAFYG------------------VD--------M-PGADVRLMRLLG  156 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~d-----Id~li~~s~~~------------------~~--------~-p~~a~~i~~~LG  156 (402)
                      ....+..|..+++.+++....+     ...+.......                  ..        . -..+.+|+..||
T Consensus        88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~  167 (270)
T d2ix4a1          88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG  167 (270)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence            5577788889999998865433     12333332210                  01        1 135789999999


Q ss_pred             CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccCccc-----------c-----------CCCCccchh
Q 044410          157 LKPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEPSETHLD  214 (402)
Q Consensus       157 l~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~-----------~~~~~~~~~  214 (402)
                      +...   .+.+..+|++++.||..|..+|++|.++.+||.++|.....           +           ..|.|.++ 
T Consensus       168 l~Gp---~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rPFD~~a-  243 (270)
T d2ix4a1         168 FQGP---NHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDR-  243 (270)
T ss_dssp             CCSC---EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTTC-
T ss_pred             CCCC---CcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCCCCCCC-
Confidence            9986   67899999999999999999999999999999999875310           1           01333222 


Q ss_pred             hhhhhhhhccCcEEEEEccCC
Q 044410          215 VLVVQAVFGDGAGAAIIGADS  235 (402)
Q Consensus       215 ~~~~~~lfGDGAaA~vL~~~~  235 (402)
                         ..+++|+||+++||++.+
T Consensus       244 ---~G~v~gEGaa~~vLe~l~  261 (270)
T d2ix4a1         244 ---DGFVIGEGSGVIVLEEYE  261 (270)
T ss_dssp             ---CSBCBBCEEEEEEEEEHH
T ss_pred             ---CCEeeEeeEEEEEEeeHH
Confidence               378999999999998754

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.17  E-value=3.1e-06  Score=73.31  Aligned_cols=89  Identities=12%  Similarity=-0.005  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCcc----EEEEEecCC----------------------C----CCC-CHHHHHHHHcCC
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKIT----HLIFSAFYG----------------------V----DMP-GADVRLMRLLGL  157 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~----------------------~----~~p-~~a~~i~~~LGl  157 (402)
                      ...|+..|+.+||+++|+++++++    .++++++.+                      +    .++ ..+.+|+..+|+
T Consensus        70 ~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl  149 (208)
T d1tqyb1          70 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM  149 (208)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred             ccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccc
Confidence            567999999999999999887764    456665421                      0    122 347899999999


Q ss_pred             CCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeccC
Q 044410          158 KPSVNRLMIYTQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR  201 (402)
Q Consensus       158 ~~~~~~~~~i~~~C~~~~~al~~A~~~i~~g~~~~vLvv~~e~~  201 (402)
                      +..   .+.+..+|++++.||..|.++|++| .+.+||.++|..
T Consensus       150 ~Gp---~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~  189 (208)
T d1tqyb1         150 RGP---SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSA  189 (208)
T ss_dssp             CSS---CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECC
T ss_pred             cce---eeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccc
Confidence            985   6789999999999999999999999 899999999964

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.43  E-value=0.00014  Score=62.62  Aligned_cols=155  Identities=14%  Similarity=0.114  Sum_probs=92.3

Q ss_pred             hhhhccCcEEEEEccCCCCC-CCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhhcc
Q 044410          219 QAVFGDGAGAAIIGADSDIS-NHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAMSP  297 (402)
Q Consensus       219 ~~lfGDGAaA~vL~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~  297 (402)
                      .++.|+|++++||++..... ........+.+.+...-.....    ..         ...     .....++++++|++
T Consensus        16 G~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~----~~---------~~~-----~~~~~~~~~~al~~   77 (205)
T d1tqya2          16 GFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMT----GL---------KAD-----GREMAETIRVALDE   77 (205)
T ss_dssp             CBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSS----CC---------CTT-----CHHHHHHHHHHHHH
T ss_pred             CEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccC----cc---------ccc-----ccccchhhhhHHhh
Confidence            78999999999998643200 0011234454432221100000    00         011     12345678889999


Q ss_pred             CCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccCC-
Q 044410          298 IGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATTG-  370 (402)
Q Consensus       298 ~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~G-  370 (402)
                      +++++ ++| ++-.|..+...-|.     +.+.++-...+++.+ .+-..+||+.+|+-++.|..++.. +.+|.+.+- 
T Consensus        78 a~i~~-~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~~~-l~~g~ipp~~  154 (205)
T d1tqya2          78 SRTDA-TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEIAACVLA-LEHGVVPPTA  154 (205)
T ss_dssp             HTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHHHHHHHH-HHHCEECCBT
T ss_pred             hcCCc-cceeeeeccccccccCchhHHHHHHHhhccccCCceee-eecccccccccccchhHHHHHHHH-HhCCeEcccC
Confidence            99997 999 99999988877554     345555332333332 134578999999977777655542 111444320 


Q ss_pred             --------------------CCCceEEEEEEcccccceeeEEee
Q 044410          371 --------------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       371 --------------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                                          .+.++++..+||-|.+.+++||+-
T Consensus       155 ~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~  198 (205)
T d1tqya2         155 NLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD  198 (205)
T ss_dssp             TCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred             CCCCCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEee
Confidence                                011578899999998888999874

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.35  E-value=0.00035  Score=59.42  Aligned_cols=151  Identities=12%  Similarity=0.127  Sum_probs=90.3

Q ss_pred             hhhhhccCcEEEEEccCCCC--CCCCCCceEEEeeeeeecCCCcccccceeecCceEEEeCCchhHHHHHhHHHHHHHhh
Q 044410          218 VQAVFGDGAGAAIIGADSDI--SNHESPLFQILSCTQTTVPDTENYISGQLKEMGTYCHLSRDVPVAIGNYVDKCLSNAM  295 (402)
Q Consensus       218 ~~~lfGDGAaA~vL~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L  295 (402)
                      ..+++|+|++++||++.+..  .+.......+.+.+....+...     .          ..      ...+.++|+++|
T Consensus        14 ~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~-----~----------~~------~~g~~~~i~~aL   72 (194)
T d1tqyb2          14 AGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPG-----S----------GR------PAGLERAIRLAL   72 (194)
T ss_dssp             CCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTT-----C----------CC------CCSHHHHHHHHH
T ss_pred             CCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeeccccccccccc-----c----------cc------hhhhhhhhhhhc
Confidence            37899999999999864320  0100112344433322111100     0          00      012346788899


Q ss_pred             ccCCCCCCcce-EEEEcCCCHHHHHHH-----HHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhcccC
Q 044410          296 SPIGISDWNSL-FYVVHPGGDGLLDQV-----EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMKATT  369 (402)
Q Consensus       296 ~~~gl~~~~di-~~i~H~~~~~~~~~~-----~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~i~~  369 (402)
                      +++++++ +|| ++-.|-.+....|.+     .+.++-.  .++.+ .+-..+||+.+|+-++.|-..+.. +.+|.+.|
T Consensus        73 ~~a~i~~-~di~~v~ahgtGt~~~D~~E~~al~~~f~~~--~~~v~-s~K~~~GH~~~AsG~~~li~~~~~-l~~g~ipp  147 (194)
T d1tqyb2          73 NDAGTGP-EDVDVVFADGAGVPELDAAEARAIGRVFGRE--GVPVT-VPKTTTGRLYSGGGPLDVVTALMS-LREGVIAP  147 (194)
T ss_dssp             HHHTCCG-GGCCEEECCCCCSHHHHHHHHHHHHHHHCTT--CSEEE-CGGGGTCBCGGGHHHHHHHHHHHH-HHHTSBCC
T ss_pred             ccccccc-cceeeeeccccCcccccHHHhhhhhhhhhcc--ccccc-cccccccccccccccceehhhhhh-hhhceecc
Confidence            9999997 999 999999887776654     4555532  22221 123578999999977766655432 11144421


Q ss_pred             ---------------------CCCCceEEEEEEcccccceeeEEee
Q 044410          370 ---------------------GEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       370 ---------------------G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                                           -...++++..+||.|.+.++++|+.
T Consensus       148 ~~~~~~~~~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~  193 (194)
T d1tqyb2         148 TAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR  193 (194)
T ss_dssp             BCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred             ccCCCCCCcccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence                                 0012578999999999999999874

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.57  E-value=0.005  Score=49.57  Aligned_cols=85  Identities=12%  Similarity=0.057  Sum_probs=55.9

Q ss_pred             hHHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-----eccccchHHHHHHHHH
Q 044410          108 EVPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMI-----YTQGCYMGGTVIRLAK  182 (402)
Q Consensus       108 ~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~-----i~~~C~~~~~al~~A~  182 (402)
                      .+.....++++++|+++|++++|||.+++..    ..+..-..++++||+++... ...     -+.++++...+|..|.
T Consensus        45 ~a~~~v~~~i~~~L~~~gl~~~dId~~i~Hq----a~~~i~~~v~~~lgl~~ek~-~~~~~~~~GNt~sasip~~L~~a~  119 (148)
T d1u6ea2          45 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQ----ANSRINELLVKNLQLRPDAV-VANDIEHTGNTSAASIPLAMAELL  119 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCCEEEECC----SCHHHHHHHHHHHTCCTTCE-ECCTHHHHCBCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccEEEecc----ccHHHHHHHHHhcCCCchhh-hhhhHHhhCCCccchHHHHHHHHH
Confidence            3556668899999999999999999988643    22345578999999976531 221     2334555555665544


Q ss_pred             HHHHcCCCCeEEEEE
Q 044410          183 DIAENNPGARVLVVC  197 (402)
Q Consensus       183 ~~i~~g~~~~vLvv~  197 (402)
                      +-=+-.+.+++|+++
T Consensus       120 ~~g~i~~Gd~vll~g  134 (148)
T d1u6ea2         120 TTGAAKPGDLALLIG  134 (148)
T ss_dssp             HHTSSCTTCEEEEEE
T ss_pred             HcCCCCCCCEEEEEE
Confidence            432223467888776

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=96.31  E-value=0.0057  Score=49.23  Aligned_cols=86  Identities=17%  Similarity=0.053  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-ee--eccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-MI--YTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-~~--i~~~C~~~~~al~~A~~~i  185 (402)
                      +.....++++++|+++|++++|||.+|...    ..+.....++++||++...... +.  -+.+.++-..+|..+..--
T Consensus        45 a~~~vp~~i~~~L~~~g~~~~dId~~i~Hq----a~~~~~~~i~~~lgi~~~k~~~~~~~~Gn~~sasip~~L~~~~~~~  120 (149)
T d1ub7a2          45 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQ----ANLRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKEAVDAG  120 (149)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCSEEEECC----SCHHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhccccccccEEEeec----cchHHHHHHHhhccchhhHHHHHHHHhcCCcchhHHHHHHHHHHcC
Confidence            445566789999999999999999988643    2334567889999998754211 11  1223344444444333322


Q ss_pred             HcCCCCeEEEEEe
Q 044410          186 ENNPGARVLVVCS  198 (402)
Q Consensus       186 ~~g~~~~vLvv~~  198 (402)
                      .-.+.+++|+++.
T Consensus       121 ~~~~Gd~vll~g~  133 (149)
T d1ub7a2         121 RIREGDHVLLVSF  133 (149)
T ss_dssp             SSCTTCEEEEEEE
T ss_pred             CCCCCCEEEEEEE
Confidence            2245788888774

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.18  E-value=0.0088  Score=46.28  Aligned_cols=95  Identities=9%  Similarity=0.134  Sum_probs=69.2

Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK  366 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~  366 (402)
                      ..+++++|+++|++. +|| .|=.|-+-....-...+.|+++.+|+..+ ---=-+||-..||=...+.+++.+      
T Consensus        27 v~Ai~klL~r~gl~~-~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~-GGaiAlGHP~GaSGarlv~~l~~~------   98 (124)
T d1afwa2          27 AYAIPKVLEATGLQV-QDIDIFEINEAFAAQALYCIHKLGIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE------   98 (124)
T ss_dssp             HHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH------
T ss_pred             HHHHHHHHHHcCCCc-ccCcEEEeccchhHHHHHHHHHcCCChhhcccc-CccceecCCcCCchHHHHHHHHHH------
Confidence            457889999999997 999 99999988887778899999999998652 112258999999988888877776      


Q ss_pred             ccCCCCCceEEE-EEEcccccceeeEEee
Q 044410          367 ATTGEGLECGVL-FGFGPGLTVETVVLQS  394 (402)
Q Consensus       367 i~~G~~~d~vll-~~~G~G~~~~~~ll~~  394 (402)
                      ++.+   ++.+. +..|.|.. .+++++.
T Consensus        99 L~~~---~~glas~C~ggG~G-~a~~ier  123 (124)
T d1afwa2          99 LKKD---QIGVVSMCIGTGMG-AAAIFIK  123 (124)
T ss_dssp             SCTT---CEEEEEEEETTTEE-EEEEEEE
T ss_pred             hccC---CEEEEEEcccCCcE-EEEEEEe
Confidence            4555   45444 33455544 3455553

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=95.76  E-value=0.019  Score=45.61  Aligned_cols=86  Identities=10%  Similarity=-0.075  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI--YTQGCYMGGTVIRLAKDIA  185 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~--i~~~C~~~~~al~~A~~~i  185 (402)
                      +.....++++++|+++|++++|||.+|....    ....-..++++||++.+... .+.  -+.++++-..+|..+..-=
T Consensus        42 av~~~~~~i~~~L~~~g~~~~dId~~i~Hq~----~~~~~~~~~~~l~l~~~k~~~~~~~~GN~~sasip~~L~~~~~~~  117 (143)
T d1hnja2          42 AVTELAHIVDETLAANNLDRSQLDWLVPHQA----NLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDG  117 (143)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEECCS----CHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHTT
T ss_pred             hhhhhhHHHHHHHHHhhhcccccceEEeccC----chHHHHHHHHhCccchhhhhhhhhhhcccccchHHHHHHHHHHhC
Confidence            4556677999999999999999999986332    22345678899999875321 111  2345566666665544421


Q ss_pred             HcCCCCeEEEEEe
Q 044410          186 ENNPGARVLVVCS  198 (402)
Q Consensus       186 ~~g~~~~vLvv~~  198 (402)
                      +-.+.+++|+++.
T Consensus       118 ~~~~Gd~vll~g~  130 (143)
T d1hnja2         118 RIKPGQLVLLEAF  130 (143)
T ss_dssp             CSCTTCEEEEEEE
T ss_pred             CCCCCCEEEEEEE
Confidence            1234688888763

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=95.47  E-value=0.012  Score=47.81  Aligned_cols=106  Identities=15%  Similarity=0.081  Sum_probs=71.4

Q ss_pred             hHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHH-----HHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410          286 YVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQV-----EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       286 ~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~-----~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~  359 (402)
                      ...++++++|+++|+++ ++| ++-.|-.+...-|.+     .+.++-....++.+ .+=..+||+.+|+-.+.|...+.
T Consensus        27 ~~~~~i~~Al~~a~i~~-~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v~-s~K~~~GH~~~AsG~~~l~~~l~  104 (161)
T d1e5ma2          27 GATRAIAWALKDSGLKP-EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATVM  104 (161)
T ss_dssp             HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCh-hhcceEEEeccCCcccchHHhhhhhhccccCCCcceEE-ecccccccccccchhhHHHHhHH
Confidence            45678889999999998 999 999999887776654     34454222222221 12457899999998888876655


Q ss_pred             hhhhhhcccCC---------------------CCCceEEEEEEcccccceeeEEee
Q 044410          360 KSIEEMKATTG---------------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       360 ~~~~~g~i~~G---------------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      . ..+|.+.|-                     ...++++.-+||-|.+-++++|+.
T Consensus       105 ~-~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~  159 (161)
T d1e5ma2         105 A-IAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK  159 (161)
T ss_dssp             H-HHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred             h-cccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence            2 112544310                     001467889999998888888874

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=95.46  E-value=0.026  Score=43.48  Aligned_cols=97  Identities=15%  Similarity=0.079  Sum_probs=64.6

Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhhhc
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEEMK  366 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~g~  366 (402)
                      ..+++++|+++|++. +|+ .|=+|-+-....-...+.|+++.+|+..+= --=-+||-.+||=...+..++.+..    
T Consensus        25 v~A~~~lL~r~gl~~-~Did~~EinEAFA~q~la~~~~l~id~~kvN~~G-GaiAlGHP~GaSGarl~~tl~~~L~----   98 (124)
T d1m3ka2          25 IPASRKALERAGWKI-GDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNG-GAIAIGHPIGASGARILNTLLFEMK----   98 (124)
T ss_dssp             HHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTC-CHHHHCCCTTTHHHHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHcCCCh-hcccHHHhcccchhheeeehHhhCCChhhcCCCC-CccccccCcCccchhHHHHHHHHHH----
Confidence            357788999999997 999 999998887777788999999999987520 1124799988886655444444311    


Q ss_pred             ccCCCCCceEE-EEEEcccccceeeEEee
Q 044410          367 ATTGEGLECGV-LFGFGPGLTVETVVLQS  394 (402)
Q Consensus       367 i~~G~~~d~vl-l~~~G~G~~~~~~ll~~  394 (402)
                      -+.|   .+.+ -+..|.|.. .+++++.
T Consensus        99 ~~~~---~~Glas~C~gGG~g-~A~liE~  123 (124)
T d1m3ka2          99 RRGA---RKGLATLCIGGGMG-VAMCIES  123 (124)
T ss_dssp             HHTC---SEEEEEEEETTTEE-EEEEEEC
T ss_pred             hcCC---CEEEEEecccccce-eEEEEEe
Confidence            1223   4433 344555554 4556653

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=95.11  E-value=0.05  Score=43.63  Aligned_cols=82  Identities=15%  Similarity=0.045  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec-cc-cchH--HHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT-QG-CYMG--GTVIRLAKDI  184 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~-~~-C~~~--~~al~~A~~~  184 (402)
                      +.....++++++|+++|++++|||.+++...    .+..-..++++||++........+. .| |++.  ..+|..   +
T Consensus        46 av~~vp~~i~~~L~~~gl~~~dId~~i~Hq~----~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~~---~  118 (153)
T d1mzja2          46 AVADVVPAAREALEVAGLTVGDLVAFVPHQA----NLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDR---L  118 (153)
T ss_dssp             HHHHHHHHHHHHHHTTTCCGGGCSEEEECCS----CHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHHHhCCCcccCCEEEEcCC----cHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHHH---H
Confidence            5566677899999999999999999986432    2345678899999976531011121 23 3332  333433   4


Q ss_pred             HHcC---CCCeEEEEE
Q 044410          185 AENN---PGARVLVVC  197 (402)
Q Consensus       185 i~~g---~~~~vLvv~  197 (402)
                      ++.+   +.+++|+++
T Consensus       119 ~~~~~~~~Gd~ill~~  134 (153)
T d1mzja2         119 VRSGAVPGGGPALMIG  134 (153)
T ss_dssp             HHHTSSCTTCEEEEEE
T ss_pred             HHcCCCCCCCEEEEEE
Confidence            4443   467888776

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=94.74  E-value=0.016  Score=47.01  Aligned_cols=106  Identities=10%  Similarity=0.102  Sum_probs=71.1

Q ss_pred             hHHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHH-----HHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410          286 YVDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQV-----EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       286 ~~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~-----~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~  359 (402)
                      ....+++++|+++|+++ ++| ++-.|-.+...-|.+     .+.++-...+...+ ..=..+||+.+|+-.+.|...+.
T Consensus        27 ~~~~~~~~al~~agi~p-~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~-s~K~~~GH~~~asG~~~li~~~~  104 (159)
T d1j3na2          27 GAALAMARALKDAGIAP-EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIGHLLGAAGAVEAIATVQ  104 (159)
T ss_dssp             HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHhhccHhhcCCCH-HHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceEe-cccccccccccccccchhhhhhh
Confidence            34567888999999997 999 999999887775554     33332111122111 13457899999998888766554


Q ss_pred             hhhhhhcccCC--------------------CCCceEEEEEEcccccceeeEEee
Q 044410          360 KSIEEMKATTG--------------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       360 ~~~~~g~i~~G--------------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      . +.++.+.+-                    .+.++++.-+||-|.+-++++|+.
T Consensus       105 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~k  158 (159)
T d1j3na2         105 A-LYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR  158 (159)
T ss_dssp             H-HHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred             H-hhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence            2 122554320                    112678899999999999999985

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.14  E-value=0.046  Score=44.09  Aligned_cols=102  Identities=12%  Similarity=0.058  Sum_probs=68.9

Q ss_pred             HHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410          287 VDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       287 ~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      ..++++++|+++++++ ++| ++-.|-.+...-|.     +.+.+|-   +++.+ .+-..+||+-+|+-.+.|...+..
T Consensus        28 ~~~~~~~al~~a~l~p-~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~---~~~v~-s~Ks~iGH~~~asG~~~l~~~l~~  102 (158)
T d1ox0a2          28 AIKAIKLALEEAEISP-EQVAYVNAHGTSTPANEKGESGAIVAVLGK---EVPVS-STKSFTGHLLGAAGAVEAIVTIEA  102 (158)
T ss_dssp             HHHHHHHHHHHHTCCG-GGCCCEECCCCSCHHHHHHHHHHHHHHHCS---SSEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccccccc-eeeeEEeeeccccccchhHHHHHHHHhcCC---cccCc-Ccccccccchhhhhhhhhcccccc
Confidence            3568889999999998 999 99999988776544     4455662   22221 135678999999887776655542


Q ss_pred             hhhhhcccCC---------------------CCCceEEEEEEcccccceeeEEee
Q 044410          361 SIEEMKATTG---------------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       361 ~~~~g~i~~G---------------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                       +.+|.+.+-                     .+.++++.-+||-|.+-++++||.
T Consensus       103 -l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~  156 (158)
T d1ox0a2         103 -MRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR  156 (158)
T ss_dssp             -HHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred             -cccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEe
Confidence             112443310                     011467888999998888888874

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=94.06  E-value=0.049  Score=44.01  Aligned_cols=105  Identities=14%  Similarity=0.160  Sum_probs=70.2

Q ss_pred             HHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHH-----HHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410          287 VDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQV-----EKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       287 ~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~-----~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      ...+++++|+++++++ +|| ++-.|-.+..+-|.+     .+.++-....++.+ .+=..+||+-+|+-.+.|...+..
T Consensus        28 ~~~~~~~al~~a~i~p-~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~-s~Ks~~GH~~~AsG~~~li~~ll~  105 (161)
T d2gfva2          28 AALAMANALRDAGIEA-SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSILA  105 (161)
T ss_dssp             HHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHhHhhcccCc-ceEEEEEeecccCcccHHHHHHHHHHHhccccccceec-cccccccccHHHHHHHHHHHHHHH
Confidence            3467889999999997 999 999999887776543     44554322222221 134579999999987777665542


Q ss_pred             hhhhhcccC----------------------CCCCceEEEEEEcccccceeeEEee
Q 044410          361 SIEEMKATT----------------------GEGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       361 ~~~~g~i~~----------------------G~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                       +.+|.+.+                      ..+.++.+.-+||-|.+-++++||.
T Consensus       106 -l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~  160 (161)
T d2gfva2         106 -LRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK  160 (161)
T ss_dssp             -HHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred             -hcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence             21244431                      1112557778999999989999874

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=93.67  E-value=0.13  Score=39.38  Aligned_cols=97  Identities=16%  Similarity=0.112  Sum_probs=61.0

Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHH--cCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKT--LGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE  364 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~--lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~  364 (402)
                      ...++++|+++|++. +|| .|=.|-+-....-...+.  |+++.+|+..+ ---=-+||-.+||=...+..++.+..  
T Consensus        24 ~~A~~~~L~r~gl~~-~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~-GGaIAlGHP~GASGari~~tl~~~L~--   99 (125)
T d1ulqa2          24 VPATRKALERAGLSF-SDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHEMR--   99 (125)
T ss_dssp             HHHHHHHHHHTTCCG-GGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHhHhhccCcCc-cccchheeccccchhHHHHHHHhhccCchhhcCCC-CCcccccCCccccchhHHHHHHHHHH--
Confidence            357789999999997 999 898888766544455555  67788887652 01125899988886666555555411  


Q ss_pred             hcccCCCCCceEE-EEEEcccccceeeEEee
Q 044410          365 MKATTGEGLECGV-LFGFGPGLTVETVVLQS  394 (402)
Q Consensus       365 g~i~~G~~~d~vl-l~~~G~G~~~~~~ll~~  394 (402)
                        -+.+   .+.+ .+..|.|.. .+++++.
T Consensus       100 --~~~~---~~G~as~C~gGG~g-~A~~iE~  124 (125)
T d1ulqa2         100 --RRKV---QFGLATMCIGVGQG-IAVVVEG  124 (125)
T ss_dssp             --HTTC---SEEEEEEEETTTEE-EEEEEEE
T ss_pred             --hcCC---CEEEEEecccccce-eEEEEEe
Confidence              1223   4433 344555554 4556653

>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=92.01  E-value=0.091  Score=41.72  Aligned_cols=80  Identities=20%  Similarity=0.101  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-ee-----eccccchHHHHHHHHHHH
Q 044410          111 KLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRL-MI-----YTQGCYMGGTVIRLAKDI  184 (402)
Q Consensus       111 ~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~-~~-----i~~~C~~~~~al~~A~~~  184 (402)
                      .-...+++++|+++|++++|||.+++...    ....-..++++||+++..... ..     -+.+.++-+.+|+.+   
T Consensus        43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~----~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~---  115 (148)
T d1u0ma2          43 EPLAPALKELAGEHGWDASDLDFYIVHAG----GPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRL---  115 (148)
T ss_dssp             HHHHHHHHHHHHTTSCCSSCCSCCEEECS----HHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCEEEECCC----CHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHH---
Confidence            33467889999999999999998776432    123456789999998764211 11     344555555555444   


Q ss_pred             HHcC---CCCeEEEEE
Q 044410          185 AENN---PGARVLVVC  197 (402)
Q Consensus       185 i~~g---~~~~vLvv~  197 (402)
                      ++.+   +.+++|+++
T Consensus       116 ~~~~~~~~Gd~ill~g  131 (148)
T d1u0ma2         116 FDEGGVEEGARGLLAG  131 (148)
T ss_dssp             HHSCCCCSSCCCEEEE
T ss_pred             HHcCCCCCCCEEEEEE
Confidence            3443   245666665

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=89.55  E-value=0.32  Score=37.36  Aligned_cols=95  Identities=17%  Similarity=0.091  Sum_probs=57.8

Q ss_pred             HHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHHHHHcCC---CccccHHHHHHHHhcCCCCcchHHHHHHHHHHhhhhh
Q 044410          289 KCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQVEKTLGL---RKEKLWASRYVLREYGNMGAPSVFFILDEVRKKSIEE  364 (402)
Q Consensus       289 ~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~~~~lgi---~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~~~~~  364 (402)
                      .+++++|+++||+. +|+ +|=.|-+-....-.+.+.+++   +.||+..+= --=-+||-..||=...+-.++.+..  
T Consensus        27 ~A~~klL~ragl~~-~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~G-GaiAlGHP~GASGaRlv~~l~~~L~--  102 (128)
T d1wdkc2          27 PATQKALKRAGLNM-ADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHG-GAIALGHPFGCSGARISGTLLNVMK--  102 (128)
T ss_dssp             HHHHHHHHHHTCCG-GGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTTC-CHHHHCCCHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHhhhcCccc-cccceEEeecccchhhhhhhhhcccccCCcceecCCC-CcccccccccccchhHHHHHHHHHH--
Confidence            46788999999997 999 998888766655556666554   445654310 0124799988886666555555411  


Q ss_pred             hcccCCCCCceEEE-EEEcccccceeeEEe
Q 044410          365 MKATTGEGLECGVL-FGFGPGLTVETVVLQ  393 (402)
Q Consensus       365 g~i~~G~~~d~vll-~~~G~G~~~~~~ll~  393 (402)
                        -+.+   .+.+. +..|.|.. .+++++
T Consensus       103 --~~~~---~~Glas~C~gGG~g-~A~~iE  126 (128)
T d1wdkc2         103 --QNGG---TFGLSTMCIGLGQG-IATVFE  126 (128)
T ss_dssp             --HTTC---SEEEEEEEETTTEE-EEEEEE
T ss_pred             --hcCC---CEEEEEecccccce-eEEEEE
Confidence              1223   44443 44555554 355555

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=89.46  E-value=0.88  Score=36.11  Aligned_cols=104  Identities=15%  Similarity=0.080  Sum_probs=66.6

Q ss_pred             HHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHHH-----HHHcCCCc--cccHHHHHHHHhcCCCCcchHHHHHHHHHH
Q 044410          288 DKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQV-----EKTLGLRK--EKLWASRYVLREYGNMGAPSVFFILDEVRK  359 (402)
Q Consensus       288 ~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~~-----~~~lgi~~--ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~  359 (402)
                      ..+++++|+++++++ +|| ++-.|-.+...-|.+     .+.++-..  ..++.+ .+=..+||+-+|+-.+.|...+.
T Consensus        27 ~~~~~~al~~a~~~~-~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i~-s~K~~~GH~~~AsG~~~li~~~l  104 (161)
T d2ix4a2          27 VLAMTRALRQSGLCP-NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS-STKGATGHLLGAAGAVEAIFSIL  104 (161)
T ss_dssp             HHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCc-cccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceeee-ccccccCCccchHHHHHHHHHHH
Confidence            357788899999997 999 999998887765544     44444211  111111 12457899999998887765443


Q ss_pred             hhhhhhcccCC----------------------CCCceEEEEEEcccccceeeEEee
Q 044410          360 KSIEEMKATTG----------------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       360 ~~~~~g~i~~G----------------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                      . +.++.+.+-                      ...++++.-+||-|.+-++++|+.
T Consensus       105 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~  160 (161)
T d2ix4a2         105 A-IHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS  160 (161)
T ss_dssp             H-HHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred             H-HhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence            2 111443210                      011456777999998888888874

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.73  E-value=0.3  Score=44.50  Aligned_cols=82  Identities=10%  Similarity=-0.005  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee-----eccccchHHHHHHHHH
Q 044410          109 VPKLGKEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNR-LMI-----YTQGCYMGGTVIRLAK  182 (402)
Q Consensus       109 ~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~-~~~-----i~~~C~~~~~al~~A~  182 (402)
                      ......++.+++|+++|++++|||.+++..    ..+..-..++++||++..... .++     .+.++++-..+|.   
T Consensus       264 ~~~~~~~~i~~~L~~~gl~~~did~~i~Hq----~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~---  336 (372)
T d1teda_         264 IFSGVAPVVTEMLWDNGLQISDIDLWAIHP----GGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLE---  336 (372)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCSCEEECC----SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHhhhhhccC----ccHHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHH---
Confidence            556678899999999999999999987633    223455678999999875321 111     2334555555553   


Q ss_pred             HHHHcCC---C-CeEEEEE
Q 044410          183 DIAENNP---G-ARVLVVC  197 (402)
Q Consensus       183 ~~i~~g~---~-~~vLvv~  197 (402)
                      .+++.+.   . +++|+++
T Consensus       337 ~~l~~g~~~~g~d~vll~~  355 (372)
T d1teda_         337 TMVQQAESAKAISTGVAFA  355 (372)
T ss_dssp             HHHHSCSSSSSSEEEEEEE
T ss_pred             HHHHhCCCCCCCCEEEEEE
Confidence            3445442   2 5666554

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=86.94  E-value=1  Score=34.07  Aligned_cols=74  Identities=15%  Similarity=0.174  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEEEecCCCCCCCHHHHHHHHcCCCCccccceeec---------cccchHHHHHHHHHHH
Q 044410          114 KEAALKAIKEWGQPVSKITHLIFSAFYGVDMPGADVRLMRLLGLKPSVNRLMIYT---------QGCYMGGTVIRLAKDI  184 (402)
Q Consensus       114 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~i~~~LGl~~~~~~~~~i~---------~~C~~~~~al~~A~~~  184 (402)
                      +.|++++|+++|++.+|||.+=+.-    .+-+.+-..+++||++...   ..++         .||+|.-..+.+++.+
T Consensus        25 v~A~~~lL~r~gl~~~Did~~EinE----AFA~q~la~~~~l~id~~k---vN~~GGaiAlGHP~GaSGarl~~tl~~~L   97 (124)
T d1m3ka2          25 IPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDPSI---VNVNGGAIAIGHPIGASGARILNTLLFEM   97 (124)
T ss_dssp             HHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCGGG---BSTTCCHHHHCCCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhcccHHHhcc----cchhheeeehHhhCCChhh---cCCCCCccccccCcCccchhHHHHHHHHH
Confidence            5688999999999999999875421    2223344568899987653   2333         4677877888888888


Q ss_pred             HHcCCCCeEEE
Q 044410          185 AENNPGARVLV  195 (402)
Q Consensus       185 i~~g~~~~vLv  195 (402)
                      -+.+ .++.|+
T Consensus        98 ~~~~-~~~Gla  107 (124)
T d1m3ka2          98 KRRG-ARKGLA  107 (124)
T ss_dssp             HHHT-CSEEEE
T ss_pred             HhcC-CCEEEE
Confidence            7765 456553

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=85.94  E-value=0.92  Score=37.37  Aligned_cols=86  Identities=7%  Similarity=0.054  Sum_probs=56.8

Q ss_pred             HHHhHHHHHHHhhccCCCCCCcce-EEEEcCCC----HHHHHHHHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHH
Q 044410          283 IGNYVDKCLSNAMSPIGISDWNSL-FYVVHPGG----DGLLDQVEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEV  357 (402)
Q Consensus       283 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~H~~~----~~~~~~~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~  357 (402)
                      ..+...++++++|+++|+++ +|| ++++....    ...--.+.++||++.+-...      ...|+++++.+.+|..+
T Consensus        75 a~~la~~Aa~~aL~~ag~~~-~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~------~i~~~gC~g~~~al~~A  147 (200)
T d1u0ma1          75 AKSRVPAVIQRALDDAELLA-TDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQI------PIAQLGCAAGGAAINRA  147 (200)
T ss_dssp             HHHHHHHHHHHHHHHHTCCG-GGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEE------EECSCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCh-hhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEe------ccccchhhHHHHHHHHH
Confidence            45566788899999999997 999 77654322    22345678999988653332      24577888888888766


Q ss_pred             HHhhhhhhcccCCCCCceEEEEEEc
Q 044410          358 RKKSIEEMKATTGEGLECGVLFGFG  382 (402)
Q Consensus       358 ~~~~~~~g~i~~G~~~d~vll~~~G  382 (402)
                      ..-      ++.|. ..++|+++.-
T Consensus       148 ~~~------l~~~~-~~~vLvv~~e  165 (200)
T d1u0ma1         148 HDF------CTAYP-EANALIVACE  165 (200)
T ss_dssp             HHH------HHHST-TCEEEEEEEE
T ss_pred             HHH------HHhCC-CCEEEEEEEe
Confidence            543      22221 1678888763

>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=83.80  E-value=3.4  Score=32.05  Aligned_cols=100  Identities=17%  Similarity=0.141  Sum_probs=65.2

Q ss_pred             HHHHHHHhhccCCCCCCcce-EEEEcCCCHHHHHH-----HHHHcCCCccccHHHHHHHHhcCCCCcchHHHHHHHHHHh
Q 044410          287 VDKCLSNAMSPIGISDWNSL-FYVVHPGGDGLLDQ-----VEKTLGLRKEKLWASRYVLREYGNMGAPSVFFILDEVRKK  360 (402)
Q Consensus       287 ~~~~i~~~L~~~gl~~~~di-~~i~H~~~~~~~~~-----~~~~lgi~~ek~~~~~~~l~~~Gn~~sasi~i~L~~~~~~  360 (402)
                      ..++++++|+.+   + .+| ++-.|-.+..+-|.     +.+.+|-..-.+..   +=..+||+-+|+-.+.|...+..
T Consensus        24 ~~~~~~~al~~a---~-~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~~~~v~s---~K~~~GH~~~asG~~~l~~~~~~   96 (151)
T d2vbaa2          24 AVRCMKMAMHGV---D-TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISA---TKAMTGHSLGAAGVQEAIYSLLM   96 (151)
T ss_dssp             HHHHHHHHHTTC---C-SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEEC---THHHHCBCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhcC---c-ccceeEEEeccCCccccHHHHHHHHHHhCCCCccccc---chhhccccccchhhhhhhHHHHH
Confidence            346777777665   3 678 99999988776554     45667632222222   35579999999888887766553


Q ss_pred             hhhhhcccCC---------------------CCCceEEEEEEcccccceeeEEee
Q 044410          361 SIEEMKATTG---------------------EGLECGVLFGFGPGLTVETVVLQS  394 (402)
Q Consensus       361 ~~~~g~i~~G---------------------~~~d~vll~~~G~G~~~~~~ll~~  394 (402)
                       +.++.+.|-                     .+.++++.-+||-|.+-++++||.
T Consensus        97 -l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~  150 (151)
T d2vbaa2          97 -LEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK  150 (151)
T ss_dssp             -HHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred             -HHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence             111333210                     011467888999999999999985