Citrus Sinensis ID: 044429

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIRVLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQSS
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHcccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccEEccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
maskypvrsvslpsrshpstikteEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMARrrkgdssieNTVASYTCFRKKMNKDAKKFIATLKQMDNkllgvsplvdqnhHLSAVIRVLREVNAVTSSIFQSLLLFLsasgskpkqsRWSLVSKLmhkgsvsceEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQSS
Flexible Loop (DISEMBL)
maskypvrsvslpsrshpstikteeelskLKIWEEQEESSRLASAESICKSLSGLEDLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSmarrrkgdssientVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIRVLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQSS
Low Complexity Region (SEG)
MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYICIDDLLNMASTqqvlsqnqnqhqKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIRVLREVNAVTssifqslllflsasgsKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQSS
Disordered region (IsUnstruct)
***********************************************ICKSLSGLEDLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQ****************NTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIRVLREVNAVTSSIFQSLLLFLS*******************************************************************LEKNLENLFRRLIRTRASLLNII****
Disordered Region (DISOPRED)
*****PV***SLPSRSHPSTIKTEEELS**********************SLSGLEDLYICIDDLLNMASTQQ**********KCIDELLDVSVKLLDICGITRDSMLQIKERVQG***************NTVASYTCFRKKMNKDAKKFIA*********************LSAVIRVLREVNAVTSSIFQSLL*******************************************DVALR*************LKELEGSIEGLEKNLENLFRRLIRTRASLLNIIS***
Disordered Region (DISEMBL)
***********************EEELSKLKIWE***********ESICKSLSGLEDLYICIDDLLNMASTQ*********HQKCIDELLDVSVKLLDICGITRDSMLQIKERVQG************SIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIRVLREVNAVTSSIFQSLLLFLSA*********WSLVSKLMHKGSVSCEEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQSS
Disordered Region (DISPRO)
*****PVRSVSLPSRSHPSTIKTEEELSKLKIWE*********SAESICKSLSGLEDLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDN***GVSPLVDQNHHLSAVIRVLREVNAVTSSIFQSLLLFLSASGS**KQSRWSLVSKLMHKGSVSCEEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIIS***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIRVLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESVDVALRSHDMGKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLLNIISQSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
224081515	285	predicted protein [Populus trichocarpa]	0.962	0.996	0.653	4e-90
224133532	285	predicted protein [Populus trichocarpa]	0.962	0.996	0.653	5e-90
224081511	283	predicted protein [Populus trichocarpa]	0.945	0.985	0.623	3e-86
359497469	290	PREDICTED: uncharacterized protein LOC10	0.966	0.982	0.567	1e-82
356502491	289	PREDICTED: uncharacterized protein LOC10	0.959	0.979	0.558	6e-82
255561347	279	conserved hypothetical protein [Ricinus	0.942	0.996	0.574	2e-81
356502482	291	PREDICTED: uncharacterized protein LOC10	0.966	0.979	0.568	5e-80
359496983	290	PREDICTED: uncharacterized protein LOC10	0.966	0.982	0.570	2e-79
356496585	291	PREDICTED: uncharacterized protein LOC10	0.966	0.979	0.538	3e-79
255639741	291	unknown [Glycine max]	0.966	0.979	0.565	5e-79

>gi|224081515|ref|XP_002306441.1| predicted protein [Populus trichocarpa] gi|222855890|gb|EEE93437.1| predicted protein [Populus trichocarpa]

 Score =  337 bits (864), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 192/294 (65%), Positives = 230/294 (78%), Gaps = 10/294 (3%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           MA KY VRS+SLPSRSHP+T + EEEL+KLK WE    S+    + SIC  LSGLEDLY 
Sbjct: 1   MACKYHVRSISLPSRSHPTTQRIEEELNKLKAWEVSSNST----SGSICNGLSGLEDLYK 56

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
           C+DDLLN+ASTQQVLS+ +N+  KC+DELLD SV+LLD+C I RD +L+ +E+VQ L S 
Sbjct: 57  CMDDLLNLASTQQVLSRYENE--KCLDELLDGSVRLLDVCSIGRDILLRFREQVQALQSA 114

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGDSSIE++VA++TCFRKKM KDAKK IA+LKQMDNK LG S L+DQ+ HLSAVIR
Sbjct: 115 FRRRKGDSSIESSVATFTCFRKKMKKDAKKLIASLKQMDNK-LGASSLLDQDQHLSAVIR 173

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESV 240
           V+REVN +  SIFQSLL+FLS S SKP QSRWSLVSKLMHKG ++CEE KQE VNE+E+V
Sbjct: 174 VIREVNVINCSIFQSLLMFLSTS-SKPNQSRWSLVSKLMHKGVIACEE-KQENVNEIETV 231

Query: 241 DVALRS-HDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           D AL    D  K++  Q  L+ LE SI+ L   LE L R LI++RASLLNIISQ
Sbjct: 232 DAALSEVSDSEKVKIAQKRLEALEMSIDDLGNCLERLSRPLIKSRASLLNIISQ 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133532|ref|XP_002327618.1| predicted protein [Populus trichocarpa] gi|222836703|gb|EEE75096.1| predicted protein [Populus trichocarpa]

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 192/294 (65%), Positives = 230/294 (78%), Gaps = 10/294 (3%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           MA KY VRS+SLPSRSHP+T + EEEL+KLK WE    S+    + SIC  LSGLEDLY 
Sbjct: 1   MACKYHVRSISLPSRSHPTTQRIEEELNKLKAWEVSSNST----SGSICNGLSGLEDLYK 56

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
           C+DDLLN+ASTQQVLS+ +N+  KC+DELLD SV+LLD+C I RD +L+ +E+VQ L S 
Sbjct: 57  CMDDLLNLASTQQVLSRYENE--KCLDELLDGSVRLLDVCSIGRDILLRFREQVQALQSA 114

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGDSSIE++VA++TCFRKKM KDAKK IA+LKQMDNK LG S L+DQ+ HLSAVIR
Sbjct: 115 FRRRKGDSSIESSVATFTCFRKKMKKDAKKLIASLKQMDNK-LGASSLLDQDQHLSAVIR 173

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESV 240
           V+REVN +  SIFQSLL+FLS S SKP QSRWSLVSKLMHKG ++CEE KQE VNE+E+V
Sbjct: 174 VIREVNVINCSIFQSLLMFLSKS-SKPNQSRWSLVSKLMHKGVIACEE-KQENVNEIETV 231

Query: 241 DVALRS-HDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           D AL    D  K++  Q  L+ LE SI+ L   LE L R LI++RASLLNIISQ
Sbjct: 232 DAALSEVSDSEKVKIAQKRLEALEMSIDDLGNCLERLSRPLIKSRASLLNIISQ 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081511|ref|XP_002306440.1| predicted protein [Populus trichocarpa] gi|222855889|gb|EEE93436.1| predicted protein [Populus trichocarpa]

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 184/295 (62%), Positives = 229/295 (77%), Gaps = 16/295 (5%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           M+ KY VRSVSLPSRSHP+T+  EEEL+KLK WE       L+++ SIC  L G+EDLY 
Sbjct: 1   MSGKYRVRSVSLPSRSHPTTLTVEEELNKLKAWEA------LSTSGSICNGLLGVEDLYK 54

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
            +D+ LN+ASTQ+VLS+++N   KC +ELLD SV+LLD+C I RD+ML+ KE++Q L S 
Sbjct: 55  YVDEFLNLASTQEVLSRHENG--KCHNELLDGSVRLLDVCSIARDTMLRFKEQIQALQSA 112

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGDSSIE++VA++TCFRKKM KDAKK IA+LKQMDNK LG S L+DQ+ HLSAVI+
Sbjct: 113 LRRRKGDSSIESSVATFTCFRKKMKKDAKKLIASLKQMDNK-LGASSLLDQDQHLSAVIK 171

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESV 240
           V+REVN +  SIFQSLLLF+S S SKPKQSRWSLVSKLMHKG ++CEE KQE VNEL +V
Sbjct: 172 VIREVNVINCSIFQSLLLFMSTS-SKPKQSRWSLVSKLMHKGEIACEE-KQENVNELVAV 229

Query: 241 DVALRSHDMGKMQHVQTSLKELEG---SIEGLEKNLENLFRRLIRTRASLLNIIS 292
             AL   ++   + V+ + K+LE    SIE LE  LE +FR LI+TRASLLN+IS
Sbjct: 230 YAAL--SEVSDSEKVKITYKKLEALVISIEDLESCLERVFRVLIKTRASLLNVIS 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497469|ref|XP_003635528.1| PREDICTED: uncharacterized protein LOC100853799 [Vitis vinifera]

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 169/298 (56%), Positives = 218/298 (73%), Gaps = 13/298 (4%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           MA++  VRS+SLPSRSH +T+K +EEL+KLK WE    +S  ++  +IC  LSG+E+LY 
Sbjct: 1   MANRCHVRSISLPSRSHSTTLKIQEELNKLKKWE----ASSTSTLGTICNGLSGMEELYK 56

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
           C+D+LL++ STQQ +S +Q  H+K ++ELLD SV LLD+CG TRD + + KE V  L S 
Sbjct: 57  CLDELLSLQSTQQAISHHQ--HEKWVEELLDGSVSLLDVCGTTRDVISEFKENVGDLQSA 114

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGD  IE+++ +Y C RKKMNKDAKK +A +K+MDNK  G SPL+DQ+H LS VI+
Sbjct: 115 LRRRKGDVCIESSINNYICSRKKMNKDAKKLLAAIKKMDNK-AGASPLLDQDHQLSTVIK 173

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESV 240
           VLR+VNA++ SIFQSL+LFLS+   K K SRWSLVSKLM KG VSCEE K E V ELE++
Sbjct: 174 VLRDVNAMSISIFQSLVLFLSSPVLKSKPSRWSLVSKLMQKGVVSCEE-KHENVKELENI 232

Query: 241 DVALRS-----HDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           D AL +      D+ KMQ  Q  L  LE SI+G +  LE +FR LI+TRAS+LNIIS 
Sbjct: 233 DFALSAISGERADLEKMQIAQKGLGALEVSIKGFDNGLECMFRHLIKTRASILNIISH 290

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502491|ref|XP_003520052.1| PREDICTED: uncharacterized protein LOC100814466 [Glycine max]

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 167/299 (55%), Positives = 216/299 (72%), Gaps = 16/299 (5%)

Query: 1   MASKY-PVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLY 59
           MA+KY  +RS+SLPSRSHPST++ EEEL K+K WE    +S +++++SI   LS LEDLY
Sbjct: 1   MANKYHKLRSISLPSRSHPSTVRVEEELRKIKTWEG---TSTISTSKSIHTGLSLLEDLY 57

Query: 60  ICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHS 119
           IC+DDLLNMASTQ+V+S ++    KC++E+LD SV++LDICGITRD+MLQIKE VQ LHS
Sbjct: 58  ICLDDLLNMASTQKVISHHRGD--KCVEEVLDGSVRILDICGITRDTMLQIKENVQALHS 115

Query: 120 MARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVI 179
             RRRKGDS +E +VA Y  F K M K+A K I++LKQMD K  GVSPL+D +HH +AVI
Sbjct: 116 SLRRRKGDSCVEASVAEYKLFTKTMKKNAIKLISSLKQMDGK-FGVSPLLDLDHHFAAVI 174

Query: 180 RVLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELES 239
           RVLREV  +  S+FQ +L FL+ S S  K S+WSLV+KLMHKG+  C+       +E++ 
Sbjct: 175 RVLREVILINLSVFQFILSFLTVSSSNSKTSKWSLVAKLMHKGAKPCDGTN----DEMQC 230

Query: 240 VDVALRS-----HDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           V+ AL S      +  K+      L+ LE +IE  E  LE+LFR LI+TRASLLNIISQ
Sbjct: 231 VEAALSSLLNEGTNDDKIHVAHERLEALEDAIESFENGLESLFRHLIKTRASLLNIISQ 289

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561347|ref|XP_002521684.1| conserved hypothetical protein [Ricinus communis] gi|223539075|gb|EEF40671.1| conserved hypothetical protein [Ricinus communis]

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 169/294 (57%), Positives = 216/294 (73%), Gaps = 16/294 (5%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           MASKY  RS+SLPSRSHP+T++ E EL+KLK  +        +S+ S+C  LSGLEDLY 
Sbjct: 1   MASKYRTRSISLPSRSHPNTLRIEGELNKLKTLDA-------SSSGSVCIGLSGLEDLYN 53

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
             +DLLNM++ Q+VL+ ++N+  KC+DELLD SVKLLDICGITRD MLQ KE+VQ L S 
Sbjct: 54  GFNDLLNMSTAQEVLTHSRNE--KCLDELLDGSVKLLDICGITRDVMLQFKEQVQSLQSA 111

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGDSSIE +++ YTCFRKKM KDAK F+A LKQMD+KL        ++ +L   I+
Sbjct: 112 LRRRKGDSSIETSISGYTCFRKKMKKDAKTFVANLKQMDSKLEASKFQYQEDLYL---IQ 168

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESV 240
           + ++V  + S IFQSLL FL++  SKPKQSRWS+ SKLMHK +++CEE KQEIVNELESV
Sbjct: 169 LFKQVILINSFIFQSLLSFLAS--SKPKQSRWSVASKLMHKRAIACEE-KQEIVNELESV 225

Query: 241 DVAL-RSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           D AL    +  KMQ  +  L+ LE  I+ +E  LE +FR L++TRAS+LNIISQ
Sbjct: 226 DSALAEKTNSEKMQIAKRRLEALEMGIQDIEICLERVFRHLVKTRASILNIISQ 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502482|ref|XP_003520048.1| PREDICTED: uncharacterized protein LOC100811784 [Glycine max]

 Score =  303 bits (776), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 170/299 (56%), Positives = 216/299 (72%), Gaps = 14/299 (4%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           MA+KY VRS+SLPSRSHPSTI+ EEELSK+K WE     +  +++ SI   +S +EDLYI
Sbjct: 1   MANKYHVRSISLPSRSHPSTIRVEEELSKIKTWE----GTFTSTSGSIHTGISLIEDLYI 56

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
           C+DDLLNMASTQ+V+S ++ +  KC+ E+LD SV++LDICGITRD+MLQIKE VQ LHS 
Sbjct: 57  CLDDLLNMASTQKVISHHRGE--KCVQEVLDGSVRILDICGITRDTMLQIKENVQALHSS 114

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGDS +E +VA Y  F KKM KDA K I +LKQMD K  GVS L+D +HH +AVIR
Sbjct: 115 LRRRKGDSCVEASVAEYKLFTKKMKKDAIKLITSLKQMDGK-FGVSTLLDLDHHFAAVIR 173

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESV 240
           VLREV  +  S+FQ  L F + S S  K S+W LV+KLMH+G   CE+K + I NE + V
Sbjct: 174 VLREVILMNLSLFQFFLSFFTVSSSNSKTSKWLLVTKLMHRGIKPCEDKSENI-NEFQCV 232

Query: 241 DVALRSH------DMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           + +L +       +  KMQ V   L+ LE +IE +E  LE++FRRLI+TRASLLNIISQ
Sbjct: 233 EASLSTLLNEGTINDEKMQVVHERLEALENAIESVENGLESVFRRLIKTRASLLNIISQ 291

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496983|ref|XP_003635390.1| PREDICTED: uncharacterized protein LOC100854626 [Vitis vinifera]

 Score =  301 bits (772), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/298 (57%), Positives = 210/298 (70%), Gaps = 13/298 (4%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           MA+   VRS+SLPSRSHP+T+K +EEL KL+ WE    +S  ++  +I   LSG+E+LY 
Sbjct: 1   MANPCHVRSISLPSRSHPTTLKIQEELYKLRKWE----ASSTSTLGTIHNGLSGMEELYK 56

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
           C+DDLL++ STQQ +S +Q  H+K ++ELLD SV LLD+C  TRD + Q KE V  L S 
Sbjct: 57  CLDDLLSLQSTQQAISHHQ--HEKWVEELLDESVSLLDVCCNTRDVISQFKENVGDLQSA 114

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGD  IE+++ +Y   RKKMNKDAKK +A +K+MDNK  G SPL+DQNH LS VIR
Sbjct: 115 LRRRKGDLCIESSINNYIRSRKKMNKDAKKLLAAMKKMDNKA-GASPLLDQNHQLSTVIR 173

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESV 240
           VLR+VNA++ SIFQSL+LFLS    K K SRWSLVSK M KG VSCEE K E V ELE++
Sbjct: 174 VLRDVNAMSISIFQSLVLFLSTPVLKSKPSRWSLVSKFMQKGVVSCEE-KHENVEELENI 232

Query: 241 DVALRS-----HDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           D AL        D+  MQ     L  LE SIEGL+  LE +FR LI+TRASLLNIIS 
Sbjct: 233 DFALSKISSDRADLETMQIAHKGLGALEVSIEGLDNGLECMFRDLIKTRASLLNIISH 290

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496585|ref|XP_003517147.1| PREDICTED: uncharacterized protein LOC100802325 [Glycine max]

 Score =  301 bits (770), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 161/299 (53%), Positives = 219/299 (73%), Gaps = 14/299 (4%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           MAS Y VRS S PS SHPS+I+ EEELSK+K WE    ++  ++++SI   LS LEDLYI
Sbjct: 1   MASLYHVRSNSFPSGSHPSSIRKEEELSKMKTWE----ATSTSTSKSIGTGLSLLEDLYI 56

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
           C++DLLN+ASTQ+V+S +Q +  KC++ELLD SV +LDICGITR++M Q+KE VQ LHS 
Sbjct: 57  CLEDLLNVASTQKVISNHQGE--KCMEELLDGSVGILDICGITRNTMPQVKENVQALHSA 114

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGDSSIE +VA Y  F KKM K+AK+ + +LKQM++K  GV P+++Q+  L+AVIR
Sbjct: 115 LRRRKGDSSIEKSVAEYNFFTKKMKKNAKQLMTSLKQMESK-FGVYPILNQDQDLAAVIR 173

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSV-SCEEKKQEIVNELES 239
           VLREV  +  SI QSLL +++   SK K ++W +V++LMHK  V SCEE  Q   NEL+ 
Sbjct: 174 VLREVITMNMSILQSLLSYMAGPASKSKSTKWLMVARLMHKKRVISCEEDSQNF-NELQC 232

Query: 240 VDVALRS-----HDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           V+ +L +      ++ K+Q V+  L+ LE +IE LE  LE +FRRL+RTRA+LLNI++Q
Sbjct: 233 VEASLSTLLSEGTNVSKVQSVRDRLEALENAIESLENGLERMFRRLVRTRANLLNIMTQ 291

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255639741|gb|ACU20164.1| unknown [Glycine max]

 Score =  300 bits (768), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 169/299 (56%), Positives = 214/299 (71%), Gaps = 14/299 (4%)

Query: 1   MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
           MA+KY VRS+SLPSRSHPSTI+ EEELSK+K WE     +  +++ SI   +S +EDLY 
Sbjct: 1   MANKYHVRSISLPSRSHPSTIRVEEELSKIKTWE----GTFTSTSGSIHTGISLIEDLYT 56

Query: 61  CIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
           C+DDLLNMASTQ+V+S ++ +  KC+ E+LD SV++LDICGITRD+MLQIKE VQ LHS 
Sbjct: 57  CLDDLLNMASTQKVISHHRGE--KCVQEVLDGSVRILDICGITRDTMLQIKENVQALHSS 114

Query: 121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
            RRRKGDS +E +VA Y  F KKM KDA K I +LKQMD K  GVS L+D +HH +AVIR
Sbjct: 115 LRRRKGDSCVEASVAEYKLFTKKMKKDAIKLITSLKQMDGK-FGVSTLLDLDHHFAAVIR 173

Query: 181 VLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESV 240
           VLREV  +  S+FQ  L F + S S  K S+W LV+KLMH+G   CE+K + I NE + V
Sbjct: 174 VLREVILMNLSLFQFFLSFFTVSSSNSKTSKWLLVTKLMHRGIKPCEDKSENI-NEFQCV 232

Query: 241 DVALRSH------DMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIISQ 293
           + +L +       +  KMQ V   L+ LE  IE +E  LE++FRRLI+TRASLLNIISQ
Sbjct: 233 EASLSTLLNEGTINDEKMQVVHERLEALENVIESVENGLESVFRRLIKTRASLLNIISQ 291

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
TAIR|locus:2127928	284	AT4G35690 "AT4G35690" [Arabido	0.932	0.968	0.387	6.6e-42
TAIR|locus:2827911	292	AT2G17680 "AT2G17680" [Arabido	0.945	0.955	0.389	1.9e-37
TAIR|locus:2127958	283	AT4G35710 "AT4G35710" [Arabido	0.928	0.968	0.363	3.9e-37
TAIR|locus:2827681	263	AT2G17080 "AT2G17080" [Arabido	0.840	0.942	0.312	4.6e-25
TAIR|locus:2128033	503	AT4G35680 [Arabidopsis thalian	0.945	0.554	0.308	4.5e-23
TAIR|locus:2827661	263	AT2G17070 "AT2G17070" [Arabido	0.861	0.965	0.295	6.1e-23
TAIR|locus:2132826	253	AT4G35200 "AT4G35200" [Arabido	0.816	0.952	0.305	3.4e-22
TAIR|locus:2081800	277	AT3G51400 "AT3G51400" [Arabido	0.772	0.823	0.318	4.9e-21
TAIR|locus:2132831	250	AT4G35210 "AT4G35210" [Arabido	0.494	0.584	0.360	6.3e-21
TAIR|locus:2128008	288	AT4G35660 "AT4G35660" [Arabido	0.901	0.923	0.289	3.5e-20

TAIR|locus:2127928 AT4G35690 "AT4G35690" [Arabidopsis thaliana (taxid:3702)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 115/297 (38%), Positives = 165/297 (55%)

Query:     1 MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
             M  K  +RS+SLPS SHPST   EE L+K+K       ++   S+ES+   L GLE+LY 
Sbjct:     4 MLVKNQLRSISLPSSSHPSTTGIEESLNKVKTI-----NTMTGSSESVLMGLEGLEELYN 58

Query:    61 CIDDLLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
             C +D L M ST            + ++E+LD S++L+DIC ++RD M++ +E V+G+ S 
Sbjct:    59 CTEDFLKMGSTQRVMSSSDGS--EFMEEMLDGSLRLMDICSVSRDLMVETQEHVRGVQSC 116

Query:   121 ARRRK---GDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLV--DQNHHL 175
              RR+K   G+  ++  VA Y  FRK M K+AK+ + +LK +D  L   S +   +Q  HL
Sbjct:   117 VRRKKVVGGEDQLDVAVAGYVGFRKNMRKEAKRLLGSLKNIDGGLSSSSSVNNGEQEEHL 176

Query:   176 SAVIRVLREVNAVTXXXXXXXXXXXXXXXXKPKQSRWSLVSKLMHKGSVSCEEKKQEIVN 235
               V+  +R+V +V+                   +S+  L S L  K     EE K    N
Sbjct:   177 VVVVDAMRQVVSVSVAVLRSFLEFLSGRRQSNIKSK--LASVLKKKKVHHVEETK----N 230

Query:   236 ELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIIS 292
             ELE++D+ +          +Q  L+E+E SI+G EK LE LFRRLIRTRASLLNIIS
Sbjct:   231 ELENLDLEI----FCSRNDLQKKLEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIIS 283

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2827911 AT2G17680 "AT2G17680" [Arabidopsis thaliana (taxid:3702)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 118/303 (38%), Positives = 160/303 (52%)

Query:     1 MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
             M  K  VRS+SL SRSHPST   EE L K  I      +S +AS+ES+   LSGLEDLY 
Sbjct:     4 MMIKNHVRSISLQSRSHPSTAAIEESLDKFLI---TMNTSTMASSESVHSGLSGLEDLYD 60

Query:    61 CIDDLLNMASTXXXXXXXXXXXXK-------CIDELLDVSVKLLDICGITRDSMLQIKER 113
             C +DLL M ST            K        ++E+LD S++L+DIC ++RD M++  E 
Sbjct:    61 CSEDLLKMGSTQRVLSFSDEKKKKKRKVKGEFMEEMLDGSLRLMDICNVSRDLMVETHEH 120

Query:   114 VQGLHSMARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNH 173
             V GL S  RRRK     +  V+ Y  FRK M K+ KK + +LK ++  L+      DQ+ 
Sbjct:   121 VLGLQSCVRRRK-----DVDVSGYVGFRKNMRKEVKKLLGSLKNINVGLVMRDHGYDQDG 175

Query:   174 --HLSAVIRVLREVNAVTXXXXXXXXXXXXXXXX-KPKQSRWSLVSKLMHKGSVSCEEKK 230
               H  AVI  +R V  +T                    +S+ +LV  LM+K      +  
Sbjct:   176 DIHFLAVIHAMRRVVYMTVSVLKSFFEFLSGRQNGNDVRSKLALV--LMNK---KFHDHD 230

Query:   231 QEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNI 290
             + + NELE+VD A+    +     +   L+E+E  I   EK+LE LFR LI+TRASLLNI
Sbjct:   231 KMVKNELENVDSAICGDSISH-DDLHEKLEEVEVWIGKFEKSLEGLFRGLIKTRASLLNI 289

Query:   291 ISQ 293
             ISQ
Sbjct:   290 ISQ 292

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2127958 AT4G35710 "AT4G35710" [Arabidopsis thaliana (taxid:3702)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 108/297 (36%), Positives = 156/297 (52%)

Query:     1 MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
             M  K  +RS+SLPSRS PST   EE L+K+K       ++   S+ESI   L+GLE+LYI
Sbjct:     4 MIIKKQLRSISLPSRSQPSTSGLEESLNKIKTI-----NTTTGSSESILMGLAGLEELYI 58

Query:    61 CIDDLLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
              +++ L M S             + ++E+LD S++L+DIC ++RD M++  E V+G+ S 
Sbjct:    59 FLEEFLKMGSKQRVMSSGGS---EFMEEMLDGSLRLMDICSVSRDLMVETHEHVRGVQSY 115

Query:   121 ARRRK-----GDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHL 175
              RR+K     G   I+  V+ Y  FRK M K+AKK + +LK++D    G +   D +H  
Sbjct:   116 VRRKKVSGGGGGDKIDVAVSDYVGFRKNMRKEAKKLLGSLKKVD----GGTRSCDNDHED 171

Query:   176 SAVIRVLREVNAVTXXXXXXXXXXXXXXXXKPKQSRWSLVSKLMHKGSVSCEEKKQEIVN 235
               ++ V+  V  V                 +    +  L S L  K       K     N
Sbjct:   172 EQLVAVIDRVRRVVSVSVVVLKSFLELLSRRKSNIKSKLASVLKMKKDNHAPAK-----N 226

Query:   236 ELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNIIS 292
              LE++D A+   D      +Q  L+E+E  I G E+NLE LFRRLIRTRAS+LNIIS
Sbjct:   227 VLETLDSAIFG-DFLSHDDLQNELEEVEMCIGGFERNLEGLFRRLIRTRASILNIIS 282

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2827681 AT2G17080 "AT2G17080" [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 86/275 (31%), Positives = 139/275 (50%)

Query:     1 MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
             MA  + VRS S PSRSHP     +E+L++L+   EQ  SS   S+ SIC+ L  L++L+ 
Sbjct:     1 MAVSFHVRSNSFPSRSHPQAAHVDEQLARLRS-SEQASSS---SSSSICQRLDNLQELHE 56

Query:    61 CIDDLLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
              +D L++   T            K +++LLD S+++LD+C I++D++ ++KE +  + S+
Sbjct:    57 SLDKLISRPVTQQALSQEHNK--KAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSI 114

Query:   121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
              RR++GD S E  V  Y   RK + K  +K   +LK        V+   D N    AV  
Sbjct:   115 LRRKRGDLSEE--VKKYLTSRKSLKKSFQKVQKSLK--------VTQAEDNNDDTLAVFG 164

Query:   181 VLREVNAVTXXXXXXXXXXXXXXXXKPKQSRWSLVSKLMHKGSVSCEEKKQEIV---NEL 237
                E  A+T                    S+WS+VSKLM+K  V+CE ++ E     +E 
Sbjct:   165 ---EAEAITLSLFDSLLSYMSGSKTC---SKWSVVSKLMNKKKVTCEAQENEFTKVDSEF 218

Query:   238 ESVDVALRSHDMGKMQHVQTSLKE-LEGSIEGLEK 271
             +S +  L+  D+  ++     L++ LE   + L K
Sbjct:   219 QS-EKTLKMDDVQNLESCIQDLEDGLESLSKSLIK 252

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128033 AT4G35680 [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 4.5e-23, P = 4.5e-23
 Identities = 93/301 (30%), Positives = 144/301 (47%)

Query:     6 PVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASA---ESICKSLSGLEDLYICI 62
             PVRS SLPSR HP ++K    LS+L IW     S  ++++   E++   L  L +LY C+
Sbjct:    17 PVRSASLPSRIHPLSVKLRTALSRLSIWRRSSSSISVSASFGYETVLVGLVNLTELYGCV 76

Query:    63 DDLLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMAR 122
              +LL   S             K +DE LD SV LLD+   TR+ ++ ++E V  L S A 
Sbjct:    77 HELLE--SPYVKHTLLHHQEGKLLDESLDGSVLLLDVYEGTREVIVAMREHVTNLKS-AL 133

Query:   123 RRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIRVL 182
             RRKG  S+E    +Y   RKK  K+  K I  LK+M+ +   +S   DQ+  +++   VL
Sbjct:   134 RRKG--SLEKEAKAYFNLRKKAKKEISKQINALKKMETR--DISTNTDQDSAIAST-SVL 188

Query:   183 REVNAVTXXXXXXXXXXXXXXXXKPKQSRWSLVSKLMHKGSVS--CEEKKQEIVNELESV 240
             RE   +T                 P  + +     L+    VS    +K   ++ E++S+
Sbjct:   189 RETIQITVSMFRHLLLFLSTIPPPPSPAIFKTTIGLLSIPFVSPSLSDKSLILIKEMKSL 248

Query:   241 D-VALRSH-DMGK-MQHVQTSLKE------LEGSIEGLEKNLENLFRRLIRTRASLLNII 291
             D V L S  D  K +  V+T   E      +E     LE  L+++ + L++ R   LNI+
Sbjct:   249 DDVFLGSILDSRKTLFEVETMENEKMRRDVVEDGFRDLEAELDSVSKCLVKNRVLFLNIL 308

Query:   292 S 292
             +
Sbjct:   309 N 309

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2827661 AT2G17070 "AT2G17070" [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 84/284 (29%), Positives = 138/284 (48%)

Query:     1 MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
             MA  + VRS S PS  HP     +E+L++L+     EE+S  +S+ SIC+ L  L++L+ 
Sbjct:     1 MAVSFHVRSHSYPSIPHPQAAHVDEQLARLR---SSEETST-SSSSSICQRLDNLQELHE 56

Query:    61 CIDDLLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
              +D L+ +  T            K +++LLD S+K+LD+C I++D++ Q+KE +  + S+
Sbjct:    57 SLDKLIRLPVTQQALGQEKNK--KDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSI 114

Query:   121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
              RR++GD S E  V  Y   RK   K  +K   +LK             + N   S  + 
Sbjct:   115 LRRKRGDLSGE--VKKYLASRKSFKKTFQKVQKSLKAAQ---------AEDNKDKS--LA 161

Query:   181 VLREVNAVTXXXXXXXXXXXXXXXXKPKQSRWSLVSKLMHKGSVSCEEKKQEIV---NEL 237
             V  E  AVT                    S+WS+VSKLM+K  ++CE ++ E     +E 
Sbjct:   162 VFGEAEAVTIAMFDSLFSYMSGSKTC---SKWSVVSKLMNKKKITCEAQENEFTKVDSEF 218

Query:   238 ESVDVALRSHDM----GKMQHVQTSLKELEGSIEGLEKNLENLF 277
             +S +  L+  D+      +Q  +  L+ L  S+     ++ N F
Sbjct:   219 QS-EKTLKMEDVQILESCIQDFEDGLESLSKSLIKYRVSILNSF 261

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2132826 AT4G35200 "AT4G35200" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 84/275 (30%), Positives = 136/275 (49%)

Query:     1 MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
             MA  + VRS S PSR HP     +E+L++L+       SS  AS+ SIC+ LS L+DL+ 
Sbjct:     1 MAVSFHVRSNSYPSRQHPQAAHVDEQLTRLR-------SSDSASSSSICQRLSNLQDLHD 53

Query:    61 CIDDLLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
              ++ ++ ++ T              I++LLD S+++LD+C I +D++ Q+KE +  + S+
Sbjct:    54 SLEKMIRLSVTNLALSQDQ------IEKLLDGSLRILDLCNIAKDAISQMKEGLMEIQSI 107

Query:   121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIR 180
              RR+ GD S E  V  Y   RK + K  +K I +LK   +K        D  +   A + 
Sbjct:   108 LRRKPGDLSGE--VKKYLVSRKFLKKSLQKVIKSLKVCQSK--------DSTN---ASLV 154

Query:   181 VLREVNAVTXXXXXXXXXXXXXXXXKPKQSRWSLVSKLMHKGSVSCEEKKQE---IVNEL 237
             V     AVT                  K   WSLVSK+M +  V+CE +  E   I +E 
Sbjct:   155 VFGRAEAVTMALFESLFSFMSGSKACGK---WSLVSKMMSQNKVTCEAEANEFTRIDSEF 211

Query:   238 ESVDVALRSHDMGKMQHVQTSLKE-LEGSIEGLEK 271
             +S + +L+  D+  ++     L++ +E   + L K
Sbjct:   212 QS-EKSLQMEDVQNLESCIQDLEDGIESLSKSLIK 245

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2081800 AT3G51400 "AT3G51400" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 80/251 (31%), Positives = 128/251 (50%)

Query:    51 SLSGLEDLYICIDDLLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQI 110
             SLS L +LY  +  L N + +                 LLD+S+  LD+C   RD   +I
Sbjct:    38 SLSLLSNLYDSVSHLFNDSPSSLLVPHHSFFT-----HLLDLSLLHLDLCSKLRDITCRI 92

Query:   111 KERVQGLHSMARRRK--GDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPL 168
             K+ ++ L S  RRR+  GDS+I   V ++   RK ++KD  K +  LKQ      G+S  
Sbjct:    93 KDCLRDLRSAFRRRRHSGDSTIRCHVKAFIRSRKAVHKDIAKLLLLLKQT-----GLSSS 147

Query:   169 VDQNHHLSAVIRVLREVNAVTXXXXXXXXXXXXXXXXKPKQSRWSLVSKLMHKGSVSCE- 227
              + +H L   I +L++V + T                KP+ S+W+LV+KL+ K   S   
Sbjct:   148 -ESSHPL---ITLLQQVCSQTCQTFRTVLLSLSTAVPKPRPSKWALVTKLVIKNVTSTSG 203

Query:   228 EKKQEIVNELESVDVALRSHDMG---KMQHVQ---TSLKELEGSIEGLEKNLENLFRRLI 281
             + +    NE + +D  LR   M    K   ++   T+L +++ ++E LE++LE L+RR+I
Sbjct:   204 QVRTGHRNEFQMMDEELRRFSMAEEIKKDRIKSMITNLDKVDVAVEDLEESLERLYRRMI 263

Query:   282 RTRASLLNIIS 292
             + R SLLNI+S
Sbjct:   264 QARVSLLNILS 274

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0007623 "circadian rhythm" evidence=RCA

TAIR|locus:2132831 AT4G35210 "AT4G35210" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 58/161 (36%), Positives = 93/161 (57%)

Query:     1 MASKYPVRSVSLPSRSHPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYI 60
             MA  + VRS S PSR HP     +E+L++L+       SS  AS+ SIC+ LS L+DL+ 
Sbjct:     1 MAVSFHVRSSSYPSRQHPQAAHVDEQLTRLR-------SSGTASSSSICQRLSNLQDLHD 53

Query:    61 CIDDLLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSM 120
              ++ ++ ++ T              I++LLD S+K+LD+C I++D + Q+KE ++ + S+
Sbjct:    54 SLEKMIRLSVTNQALSQDQ------IEKLLDGSIKILDLCSISKDGLSQMKESLKEIQSI 107

Query:   121 ARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNK 161
              RR++GD S E  V  Y   RK + K  +K + +LK   NK
Sbjct:   108 VRRKRGDLSAE--VKKYLASRKFLKKSFEKVLKSLKTSQNK 146

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2128008 AT4G35660 "AT4G35660" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 85/294 (28%), Positives = 134/294 (45%)

Query:     6 PVRSVSLPSRS-HPSTIKTEEELSKLKIWEEQEESSRLASAESICKSLSGLEDLYICIDD 64
             P RS+SLP+R  HP   + EEEL K++       SS  AS+  I   L+ L +LY  +++
Sbjct:    15 PARSISLPTRLIHPKAQRVEEELKKIQALN----SSSSASSR-IQLGLAKLVELYDFVNE 69

Query:    65 LLNMASTXXXXXXXXXXXXKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMARRR 124
              + ++S             K +++ LD S+ LLD+   TRD +  + E +Q L S  RRR
Sbjct:    70 QV-ISSPQGQQALRLCRNRKLVEDALDESIVLLDVSDFTRDLIGTLMEHIQELQSALRRR 128

Query:   125 KGD-SSIENTVASYTCFRKKMNKDAKKFIATL--KQMDNKLLGVSPLVDQNHHLSAVIRV 181
             +G+ SS+++ + SY  F KK   +A + + +L  +Q   K   +      + H S V  +
Sbjct:   129 RGNLSSVQSEIRSYISFHKKSKTEAARQVKSLARRQTKKKAWVIKQSGGLDEHSSMVSNI 188

Query:   182 LREVNAVTXXXXXXXXXXXXXXXXKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESVD 241
             LR+ NA T                  ++            G + C +        + S  
Sbjct:   189 LRQSNASTISILQSLLQFLSTSGENNEKKN----------GEIGCVDNSM-----IRSFF 233

Query:   242 VALRSHDMGKMQHVQTSLKEL---EGSIEGLEKNLENLFRRLIRTRASLLNIIS 292
               +    M K    QT L  L     S+E ++  L  L RRLI+ RASLLNI++
Sbjct:   234 GRIIGRKMVKEIDAQTILGRLAMVNVSLEAIKDELSYLSRRLIQHRASLLNIVT 287

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00570002 hypothetical protein (285 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	295
pfam03087	230	pfam03087, DUF241, Arabidopsis protein of unknown	1e-52

>gnl|CDD|217360 pfam03087, DUF241, Arabidopsis protein of unknown function

 Score =  171 bits (435), Expect = 1e-52
 Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 11/240 (4%)

Query: 51  SLSGLEDLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQI 110
            LSGL++LY C+++LL  + TQQ LS  Q    K  +ELLD S++LLDIC ++RD +++I
Sbjct: 2   GLSGLKELYDCVEELLRSSPTQQQLSSLQ---SKFFEELLDGSLRLLDICSVSRDLIVEI 58

Query: 111 KERVQGLHSMARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVD 170
           KE V+ L S A RRK    +E  V +Y   RKK+ K+  K + +LK+MD K+   +    
Sbjct: 59  KEHVRELQS-ALRRKRSGDLEVEVKAYVRSRKKLKKEIAKLLNSLKKMDTKVWNNN---G 114

Query: 171 QNHHLSAVIRVLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKK 230
                SAV+ VL E  +VT S+F+S+LLFLS +       + SL+S+   K   S  +  
Sbjct: 115 DQEDASAVLDVLEETVSVTVSVFRSVLLFLSTT-KTSFDIKSSLLSEKKSKKGGS--QSS 171

Query: 231 QEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNI 290
             I +EL  +D   R  +    + +   L+ELE SIE LE  LE+LFRRLI+TR SLLNI
Sbjct: 172 LSIRSELSRLDEEKRRDNEEV-KDILKRLEELENSIEELEDELESLFRRLIQTRVSLLNI 230

This family represents a number of Arabidopsis proteins. Their functions are unknown. Length = 230

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
PF03087	231	DUF241: Arabidopsis protein of unknown function; I	100.0
PF05633	389	DUF793: Protein of unknown function (DUF793); Inte	99.89
PF05055	336	DUF677: Protein of unknown function (DUF677); Inte	95.03

>PF03087 DUF241: Arabidopsis protein of unknown function; InterPro: IPR004320 This family represents plant proteins of unknown function

Probab=100.00  E-value=3.1e-68  Score=483.85  Aligned_cols=230  Identities=54%  Similarity=0.814  Sum_probs=210.6

Q ss_pred             hHHhhhHHHHHhHHHHHcCchhHHHHhhhhhhhHHHHHHhhhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCCCcc
Q 044429           50 KSLSGLEDLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMARRRKGDSS  129 (295)
Q Consensus        50 ~~L~~L~~l~~~~~~Ll~lP~~q~aL~~~~~~~~k~vee~LD~sl~LLD~C~~~rd~ll~lKe~v~eLqsalRRr~g~~~  129 (295)
                      +||++|.|||+|++|||++|++||+|++++   +||||++|||||+|||+||+|||+|++||||++|||++||||| +..
T Consensus         1 dgL~~L~~Ly~~~~ell~lp~tq~al~~~~---~k~ve~lLd~sL~LLD~c~~~rd~ll~lKe~v~eLqsalRRr~-~~~   76 (231)
T PF03087_consen    1 DGLSGLKDLYECLEELLQLPSTQQALSHHQ---EKWVEELLDGSLRLLDACGTFRDALLQLKEHVQELQSALRRRD-DGS   76 (231)
T ss_pred             CchhHHHHHHHHHHHHHcCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chh
Confidence            599999999999999999999999999866   6999999999999999999999999999999999999999998 333


Q ss_pred             chhhhHHHHHHHHhhhHHHHHHHHHHHhhcccccCCCCCcccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 044429          130 IENTVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQN-HHLSAVIRVLREVNAVTSSIFQSLLLFLSASGSKPK  208 (295)
Q Consensus       130 ~~~~v~~y~~~rKk~kK~i~k~l~~Lk~~~~k~~~~~~~~~~d-~~~~~vv~~l~ea~~it~sv~~sll~~~s~~~~~~~  208 (295)
                      ++++|++|+++|||++|+|+|+++++|+++++   .++. +.| ++.+.++++++||+++|+++|+++++|+|+|..+++
T Consensus        77 ~~~~i~sy~~~rKk~kK~i~K~~~~lk~~~~~---~~~~-~~~~~~~~~vv~~l~ea~~~t~si~~sll~~ls~~~~~~~  152 (231)
T PF03087_consen   77 IESEIASYIRSRKKAKKEIAKLLRSLKRMSNK---SSSS-NDDDEHLSAVVRVLREAREITVSIFESLLSFLSSPSKKSK  152 (231)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---cCCC-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence            99999999999999999999999999999886   2222 334 368999999999999999999999999999999999


Q ss_pred             CCchhHHHHhhhcCcccchhhhhhhhhhHHHHHHHhhccCchhhHHHHHHHHHHHhhHHHHhhhHHHHHHHHHHHHHHHh
Q 044429          209 QSRWSLVSKLMHKGSVSCEEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLL  288 (295)
Q Consensus       209 ~s~Ws~vskl~~~~~v~~~~~~~~~~nE~~~vDaal~~l~~~~~~~~~~~le~LE~~I~~lE~gle~lFR~LI~tRVSLL  288 (295)
                      +++||+|+++|++++. |...+.+. ||++++|+++.. +.++++.++++||+||.||++||+|+|+|||+|||||||||
T Consensus       153 ~~~wslvsk~~~~~~~-~~~~~~~~-~e~~~~d~~~~~-~~e~~~~~~~~Le~LE~~Ie~lE~glE~vFR~LIktRVSLL  229 (231)
T PF03087_consen  153 SSKWSLVSKLMQKKRS-CDSSEENR-NEFEKVDAALKS-DEEEVQNAQKRLEELEECIEELEEGLECVFRRLIKTRVSLL  229 (231)
T ss_pred             ccchhHHHHHHhcccc-cchhHHHH-HHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999998864 55444455 999999998865 56889999999999999999999999999999999999999


Q ss_pred             hh
Q 044429          289 NI  290 (295)
Q Consensus       289 NI  290 (295)
                      ||
T Consensus       230 NI  231 (231)
T PF03087_consen  230 NI  231 (231)
T ss_pred             cC
Confidence            98

>PF05633 DUF793: Protein of unknown function (DUF793); InterPro: IPR008511 This entry includes Protein BYPASS 1 which is required for normal root and shoot development

Probab=99.89  E-value=1.7e-21  Score=187.48  Aligned_cols=258  Identities=20%  Similarity=0.308  Sum_probs=189.8

Q ss_pred             ChhhHHHHHH-hhhhhhhccc-cccccchHHHHhHHhhhHHHHHhHHHHHcCchhHH-HHhhhhhhhHHHHHHhhhhhHH
Q 044429           19 STIKTEEELS-KLKIWEEQEE-SSRLASAESICKSLSGLEDLYICIDDLLNMASTQQ-VLSQNQNQHQKCIDELLDVSVK   95 (295)
Q Consensus        19 ~~~~~e~~L~-~Lr~~~~~s~-~~~~~ss~~i~~~L~~L~~l~~~~~~Ll~lP~~q~-aL~~~~~~~~k~vee~LD~sl~   95 (295)
                      .+..||.++. +|....+.++ ++++.|.+||...|..+...|+.+..||  |..+. .++....  +|||++|||++++
T Consensus        38 ~L~~Fq~~va~rl~~L~~~~~~~~~~LSL~W~~~~ld~~l~~~~efr~li--~~~~~~~~s~~~~--dk~v~eylD~sVK  113 (389)
T PF05633_consen   38 ELEAFQRHVAERLSDLSPSSKDSDDFLSLSWMRKALDSFLCCHEEFRALI--TNLRDLPLSKPPD--DKWVDEYLDRSVK  113 (389)
T ss_pred             hHHHHHHHHHHHHHHhccCcCcccccccHHHHHHHHHHHHHHHHHHHHHH--hcccccccCCchH--HHHHHHHHHHHHH
Confidence            5677888887 6777765432 2467899999999999999999999998  22222 3444446  8999999999999


Q ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHHHhccCCCccchhhhHHHHHHHHhhhHHHHHHHHHHHh------------------
Q 044429           96 LLDICGITRDSMLQIKERVQGLHSMARRRKGDSSIENTVASYTCFRKKMNKDAKKFIATLKQ------------------  157 (295)
Q Consensus        96 LLD~C~~~rd~ll~lKe~v~eLqsalRRr~g~~~~~~~v~~y~~~rKk~kK~i~k~l~~Lk~------------------  157 (295)
                      +|||||+++|.|.++++...-+|.|++--+....+  .-..|.|+||    .+..+...++.                  
T Consensus       114 lLDvCNA~~~gi~~lr~~~~ll~~al~~L~~~~~~--~~~~~rRAr~----aL~dl~~~~~~~~~~~~~~~~~rnrs~~r  187 (389)
T PF05633_consen  114 LLDVCNAIRDGISQLRQWQLLLQIALHALDSSRPL--GEGQLRRARK----ALSDLKIAMLDDKDSGSSGGSHRNRSFGR  187 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--cHHHHHHHHH----HHHHHHHHHhcccccCccccccccccccc
Confidence            99999999999999999999999999988722111  1235666666    55555443322                  


Q ss_pred             ---------------------------------------hcccccCCCCCcccc-hhhHHHHHHHHHHHHHHHHHHHHHH
Q 044429          158 ---------------------------------------MDNKLLGVSPLVDQN-HHLSAVIRVLREVNAVTSSIFQSLL  197 (295)
Q Consensus       158 ---------------------------------------~~~k~~~~~~~~~~d-~~~~~vv~~l~ea~~it~sv~~sll  197 (295)
                                                             |.++ +..|.  ..+ ..+..++..+|.+..+|++|.-.+.
T Consensus       188 ~~~~~~~~~~s~~~~~~~~~rsls~~vsr~wsa~~~Lq~m~~n-L~~Pk--~~esak~~gL~~A~Y~m~~vtvFV~~vlV  264 (389)
T PF05633_consen  188 SNSSGRRSSSSSGSRSAGHFRSLSWSVSRNWSAARQLQAMGEN-LVLPK--GKESAKGRGLLRAMYGMKSVTVFVCWVLV  264 (389)
T ss_pred             ccCCCCCCCCccccCCcccchhhhhhhhhhhhhHHHHHHHHhc-CCCCC--CccccccchHHHHHHHHHHHHHHHHHHHH
Confidence                                                   2222 11111  112 2345799999999999999988888


Q ss_pred             HHhccc-C------C-CCCCCchhHHHHhhhcCcccchhhh-------hhhhhhHHHHHHHhhcc-----------C---
Q 044429          198 LFLSAS-G------S-KPKQSRWSLVSKLMHKGSVSCEEKK-------QEIVNELESVDVALRSH-----------D---  248 (295)
Q Consensus       198 ~~~s~~-~------~-~~~~s~Ws~vskl~~~~~v~~~~~~-------~~~~nE~~~vDaal~~l-----------~---  248 (295)
                      ..++.+ .      . .|+...|+.-...+|.+ |. +|..       ..+++|++.||++.+.|           +   
T Consensus       265 AA~pc~~rgL~~~l~~vP~~~~WA~s~~~LQ~r-I~-eEikkk~~kgs~gLLkEl~~ve~~vr~L~el~d~~~~p~~~e~  342 (389)
T PF05633_consen  265 AAFPCQDRGLQVHLSAVPRQFSWAPSFISLQER-IN-EEIKKKERKGSCGLLKELQQVEASVRELHELIDSFQFPLEEEK  342 (389)
T ss_pred             HeeecCCccccCCCCCCccccccchHHHHHHHH-HH-HHHhhccccCcchHHHHHHHHHHHHHHHHHHHHhccCCcchhH
Confidence            866553 2      2 46788999877778865 21 1111       13469999999988776           1   


Q ss_pred             ----chhhHHHHHHHHHHHhhHHHHhhhHHHHHHHHHHHHHHHhhhc
Q 044429          249 ----MGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTRASLLNII  291 (295)
Q Consensus       249 ----~~~~~~~~~~le~LE~~I~~lE~gle~lFR~LI~tRVSLLNIl  291 (295)
                          .+.++++.+-.+.|++++++||.+++.+|+++|.+|..+|+.|
T Consensus       343 ~~ev~~~V~EL~~~~~~L~~GLdpLerqVre~Fh~IV~sR~elLd~l  389 (389)
T PF05633_consen  343 EEEVREAVEELARVCEALSQGLDPLERQVREVFHRIVRSRTELLDSL  389 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhHHHHhcC
Confidence                2335888899999999999999999999999999999999875

Prevents constitutive production of a root mobile carotenoid-derived signaling compound that is capable of arresting shoot and leaf development [, ].

>PF05055 DUF677: Protein of unknown function (DUF677); InterPro: IPR007749 This entry contains proteins belonging to the UPF0496 family, found in plants

Probab=95.03  E-value=3.7  Score=39.85  Aligned_cols=43  Identities=9%  Similarity=0.245  Sum_probs=40.2

Q ss_pred             HHHHHHhhhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC
Q 044429           83 QKCIDELLDVSVKLLDICGITRDSMLQIKERVQGLHSMARRRK  125 (295)
Q Consensus        83 ~k~vee~LD~sl~LLD~C~~~rd~ll~lKe~v~eLqsalRRr~  125 (295)
                      ...|++|.|.|+.=+|+|++...++-+.+.+.+-++.+|.+-+
T Consensus        65 ~~Lv~~YFd~S~~a~~~C~~L~k~I~~aR~~~~~I~~al~~~~  107 (336)
T PF05055_consen   65 FRLVSDYFDSSLEASDFCEALLKCIHRARDNYLPIRRALKQFE  107 (336)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh
Confidence            4689999999999999999999999999999999999998865

This family includes AT14A like proteins from Arabidopsis thaliana. At14a contains a small domain that has sequence similarities to integrins from fungi, insects and humans. Transcripts of At14a are found in all Arabidopsis tissues and the protein localises partly to the plasma membrane [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	295
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.5 bits (130), Expect = 2e-08
 Identities = 48/306 (15%), Positives = 93/306 (30%), Gaps = 78/306 (25%)

Query: 11  SLPS---RSHP---STI--KTEEELSKLKIWEEQEESSRLASAESICKSLSGLE------ 56
            LP     ++P   S I     + L+    W+      +L +   I  SL+ LE      
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWK-HVNCDKLTTI--IESSLNVLEPAEYRK 373

Query: 57  ---DLYICIDDLLNMASTQQVLSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQIKER 113
               L +             ++  +  +      +++ V  KL     + +      KE 
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIK-----SDVMVVVNKLHKYSLVEKQP----KES 424

Query: 114 VQGLHSMARRRKGDSSIENT-----VASYTCFRKKMNKDAKKFIATLKQMDN---KLLGV 165
              + S+    K     E       V  Y   +   + D          +D      +G 
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL-----IPPYLDQYFYSHIG- 478

Query: 166 SPLVDQNHHLSAVIRVLREVNAVTSSIFQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVS 225
                  HHL  +    R       ++F+ + L            R+ L  K+ H  +  
Sbjct: 479 -------HHLKNIEHPERM------TLFRMVFLDF----------RF-LEQKIRHDSTAW 514

Query: 226 CEEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLENLFRRLIRTR- 284
                  I+N L+     L+ +      ++  +  + E  +  +   L  +   LI ++ 
Sbjct: 515 NA--SGSILNTLQQ----LKFYK----PYICDNDPKYERLVNAILDFLPKIEENLICSKY 564

Query: 285 ASLLNI 290
             LL I
Sbjct: 565 TDLLRI 570

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 9e-07
 Identities = 40/307 (13%), Positives = 87/307 (28%), Gaps = 98/307 (31%)

Query: 30  LKIWEEQEESSRLASAESIC----KSLSGLEDLYICIDDLLNMASTQQVLS--QNQNQHQ 83
           L +       + L   + +      + +   D    I   ++  S Q  L        ++
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH--SIQAELRRLLKSKPYE 244

Query: 84  KCIDELLDVS----VKLLDI-CGI---TRDSMLQIKERVQGLH----SMARRRKGDSSIE 131
            C+  LL+V         ++ C I   TR    Q+ + +        S+       +  E
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCKILLTTRFK--QVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 132 NTVASYTCFRKKMNKDAKKFIATL-KQMDNKLLGVSPLVDQNHHLSAVIRVLRE------ 184
                 +   K ++   +     L +++    L  +P       LS +   +R+      
Sbjct: 303 ----VKSLLLKYLDCRPQD----LPREV----LTTNPR-----RLSIIAESIRDGLATWD 345

Query: 185 ------VNAVTSSI---------------FQSLLLFLSASGSKPKQSR---------WSL 214
                  + +T+ I               F  L +F       P  +          W  
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF-------PPSAHIPTILLSLIWFD 398

Query: 215 VSKLMHKGSVSCEEKKQEIVNELESVDVALRSHDMGKMQHVQTSLKELEGSIEGLEKNLE 274
           V           +     +VN+L    +  +            S+  +   ++   +N  
Sbjct: 399 VI----------KSDVMVVVNKLHKYSLVEKQPKEST-----ISIPSIYLELKVKLENEY 443

Query: 275 NLFRRLI 281
            L R ++
Sbjct: 444 ALHRSIV 450

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 4e-06
 Identities = 33/237 (13%), Positives = 80/237 (33%), Gaps = 69/237 (29%)

Query: 75  LSQNQNQHQKCIDELLDVSVKLLDICGITRDSMLQI--KERVQGLHSMARRRKGDSSIEN 132
             ++Q Q++  +    D  V   D C   +D    I  KE +  +           ++  
Sbjct: 11  TGEHQYQYKDILSVFEDAFVDNFD-CKDVQDMPKSILSKEEIDHIIMS------KDAVSG 63

Query: 133 TVASYTCFRKKMNKDAKKFIATLKQMDNKLLGVSPLVDQNHHLSAVIRVLREVNAVTSSI 192
           T+  +     K  +  +KF+  + +++ K L +SP+  +    S + R            
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRINYKFL-MSPIKTEQRQPSMMTR------------ 110

Query: 193 FQSLLLFLSASGSKPKQSRWSLVSKLMHKGSVSCEEKKQEIVNELESVD----VALRSHD 248
                +++       ++ R    +++  K +VS  +   ++   L  +     V +    
Sbjct: 111 -----MYIE------QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI--DG 157

Query: 249 M---GKMQHVQTSL-----------KELEGSI-----------EGLEKNLENLFRRL 280
           +   GK     T +            +++  I           E + + L+ L  ++
Sbjct: 158 VLGSGK-----TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI 209

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00